Multiple sequence alignment - TraesCS3B01G214400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G214400 chr3B 100.000 5802 0 0 1 5802 254780959 254775158 0.000000e+00 10715.0
1 TraesCS3B01G214400 chr3B 87.958 382 46 0 4351 4732 266566512 266566893 8.870000e-123 451.0
2 TraesCS3B01G214400 chr3B 97.436 195 4 1 3043 3236 254777723 254777529 1.210000e-86 331.0
3 TraesCS3B01G214400 chr3B 97.436 195 4 1 3237 3431 254777917 254777724 1.210000e-86 331.0
4 TraesCS3B01G214400 chr3B 97.884 189 4 0 2488 2676 780293696 780293884 1.560000e-85 327.0
5 TraesCS3B01G214400 chr3B 99.419 172 1 0 756 927 254781248 254781419 4.360000e-81 313.0
6 TraesCS3B01G214400 chr3B 96.774 93 3 0 2996 3088 254777872 254777964 7.780000e-34 156.0
7 TraesCS3B01G214400 chr3B 90.385 104 7 3 2996 3098 28259622 28259723 3.650000e-27 134.0
8 TraesCS3B01G214400 chr3B 89.720 107 7 4 998 1102 266563873 266563977 3.650000e-27 134.0
9 TraesCS3B01G214400 chr3B 94.118 51 1 2 3237 3286 725120730 725120779 6.230000e-10 76.8
10 TraesCS3B01G214400 chr3B 90.000 60 2 3 3237 3296 43050363 43050418 2.240000e-09 75.0
11 TraesCS3B01G214400 chr3D 93.171 1640 55 10 4187 5802 175405450 175403844 0.000000e+00 2355.0
12 TraesCS3B01G214400 chr3D 94.191 878 39 5 1621 2494 175407625 175406756 0.000000e+00 1328.0
13 TraesCS3B01G214400 chr3D 94.151 701 24 5 930 1620 175408355 175407662 0.000000e+00 1051.0
14 TraesCS3B01G214400 chr3D 92.615 650 37 4 3276 3915 175406443 175405795 0.000000e+00 924.0
15 TraesCS3B01G214400 chr3D 91.515 330 24 3 2677 3002 175406767 175406438 8.870000e-123 451.0
16 TraesCS3B01G214400 chr3D 87.696 382 47 0 4351 4732 185792427 185792808 4.120000e-121 446.0
17 TraesCS3B01G214400 chr3D 94.583 240 13 0 3914 4153 175405690 175405451 7.100000e-99 372.0
18 TraesCS3B01G214400 chr3D 92.258 155 12 0 3082 3236 175406443 175406289 2.720000e-53 220.0
19 TraesCS3B01G214400 chr3D 89.091 110 7 4 998 1102 185790122 185790231 1.310000e-26 132.0
20 TraesCS3B01G214400 chr3A 94.964 695 24 3 927 1620 215482283 215481599 0.000000e+00 1079.0
21 TraesCS3B01G214400 chr3A 85.308 1055 96 35 3294 4300 215481009 215479966 0.000000e+00 1035.0
22 TraesCS3B01G214400 chr3A 90.052 774 31 12 4292 5056 215479624 215478888 0.000000e+00 961.0
23 TraesCS3B01G214400 chr3A 92.264 530 25 9 1621 2138 215481562 215481037 0.000000e+00 737.0
24 TraesCS3B01G214400 chr3A 89.320 515 34 10 5198 5700 215474852 215474347 1.370000e-175 627.0
25 TraesCS3B01G214400 chr3A 87.696 382 47 0 4351 4732 246042253 246041872 4.120000e-121 446.0
26 TraesCS3B01G214400 chr3A 86.207 174 24 0 754 927 143945199 143945372 7.670000e-44 189.0
27 TraesCS3B01G214400 chr3A 85.632 174 25 0 754 927 143943614 143943441 3.570000e-42 183.0
28 TraesCS3B01G214400 chr3A 89.051 137 15 0 3100 3236 215481009 215480873 2.780000e-38 171.0
29 TraesCS3B01G214400 chr3A 92.793 111 4 2 5198 5304 215475530 215475420 2.160000e-34 158.0
30 TraesCS3B01G214400 chr3A 90.991 111 6 2 5198 5304 215476194 215476084 4.680000e-31 147.0
31 TraesCS3B01G214400 chr3A 94.186 86 5 0 5104 5189 215478423 215478338 1.310000e-26 132.0
32 TraesCS3B01G214400 chr4A 99.175 485 4 0 443 927 695306255 695306739 0.000000e+00 874.0
33 TraesCS3B01G214400 chr4A 100.000 447 0 0 1 447 695304198 695304644 0.000000e+00 826.0
34 TraesCS3B01G214400 chr4A 96.939 196 4 2 2481 2676 245257913 245258106 1.560000e-85 327.0
35 TraesCS3B01G214400 chr4A 99.419 172 1 0 756 927 695303909 695303738 4.360000e-81 313.0
36 TraesCS3B01G214400 chr4A 93.023 86 4 2 994 1078 163817136 163817220 2.200000e-24 124.0
37 TraesCS3B01G214400 chr1B 97.382 191 5 0 2491 2681 388769110 388768920 5.610000e-85 326.0
38 TraesCS3B01G214400 chr1B 92.857 98 5 2 2992 3089 2787138 2787043 2.180000e-29 141.0
39 TraesCS3B01G214400 chr1B 89.720 107 8 3 2979 3085 327340487 327340590 3.650000e-27 134.0
40 TraesCS3B01G214400 chr5A 96.000 200 6 2 2480 2678 313879013 313878815 2.020000e-84 324.0
41 TraesCS3B01G214400 chr5A 92.537 67 3 2 2402 2468 170839492 170839556 1.720000e-15 95.3
42 TraesCS3B01G214400 chr7B 97.849 186 4 0 2491 2676 245176239 245176054 7.250000e-84 322.0
43 TraesCS3B01G214400 chr7B 91.071 56 5 0 3224 3279 458526865 458526920 6.230000e-10 76.8
44 TraesCS3B01G214400 chr6B 97.849 186 4 0 2491 2676 560191697 560191512 7.250000e-84 322.0
45 TraesCS3B01G214400 chr4B 97.849 186 4 0 2491 2676 291852401 291852216 7.250000e-84 322.0
46 TraesCS3B01G214400 chr5B 95.477 199 9 0 2482 2680 554512572 554512770 9.380000e-83 318.0
47 TraesCS3B01G214400 chr5B 86.264 182 24 1 754 934 711058802 711058621 4.590000e-46 196.0
48 TraesCS3B01G214400 chr5B 85.714 182 25 1 754 934 711064438 711064619 2.130000e-44 191.0
49 TraesCS3B01G214400 chr5B 96.591 88 1 2 2998 3085 73990255 73990170 1.690000e-30 145.0
50 TraesCS3B01G214400 chr2A 96.825 189 6 0 2491 2679 711883865 711883677 3.370000e-82 316.0
51 TraesCS3B01G214400 chr2A 91.837 98 6 2 2989 3086 15846303 15846398 1.010000e-27 135.0
52 TraesCS3B01G214400 chr2A 97.468 79 2 0 1000 1078 51582360 51582438 1.010000e-27 135.0
53 TraesCS3B01G214400 chr2A 90.196 102 7 3 2992 3092 8356054 8355955 4.720000e-26 130.0
54 TraesCS3B01G214400 chr2A 87.654 81 10 0 2388 2468 736304643 736304723 1.720000e-15 95.3
55 TraesCS3B01G214400 chr2A 97.826 46 1 0 3238 3283 434076249 434076294 4.820000e-11 80.5
56 TraesCS3B01G214400 chr4D 85.549 173 23 2 756 927 338007198 338007369 4.620000e-41 180.0
57 TraesCS3B01G214400 chr4D 84.746 177 25 2 754 929 338001504 338001329 5.980000e-40 176.0
58 TraesCS3B01G214400 chr5D 92.857 98 5 2 2992 3089 297738433 297738338 2.180000e-29 141.0
59 TraesCS3B01G214400 chr6A 92.632 95 5 2 2994 3088 27342890 27342982 1.010000e-27 135.0
60 TraesCS3B01G214400 chr6A 87.952 83 8 1 2388 2468 349512479 349512561 4.790000e-16 97.1
61 TraesCS3B01G214400 chr6A 97.826 46 1 0 3237 3282 555969543 555969498 4.820000e-11 80.5
62 TraesCS3B01G214400 chr2D 97.468 79 2 0 1000 1078 49875921 49875999 1.010000e-27 135.0
63 TraesCS3B01G214400 chr2B 97.468 79 2 0 1000 1078 77168977 77169055 1.010000e-27 135.0
64 TraesCS3B01G214400 chr2B 92.683 82 6 0 2388 2469 426480492 426480573 1.020000e-22 119.0
65 TraesCS3B01G214400 chr2B 97.826 46 1 0 3237 3282 678068924 678068969 4.820000e-11 80.5
66 TraesCS3B01G214400 chr2B 95.918 49 1 1 3236 3284 740799811 740799858 1.730000e-10 78.7
67 TraesCS3B01G214400 chr1D 96.250 80 3 0 999 1078 404139954 404139875 1.310000e-26 132.0
68 TraesCS3B01G214400 chr1D 92.593 81 6 0 2388 2468 104573349 104573429 3.670000e-22 117.0
69 TraesCS3B01G214400 chr1A 92.593 81 6 0 2388 2468 107472108 107472028 3.670000e-22 117.0
70 TraesCS3B01G214400 chr1A 91.358 81 7 0 2388 2468 202099341 202099261 1.710000e-20 111.0
71 TraesCS3B01G214400 chr1A 91.358 81 7 0 2388 2468 350014393 350014313 1.710000e-20 111.0
72 TraesCS3B01G214400 chr6D 87.302 63 4 3 3237 3297 8551058 8551118 1.040000e-07 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G214400 chr3B 254775158 254780959 5801 True 3792.333333 10715 98.290667 1 5802 3 chr3B.!!$R1 5801
1 TraesCS3B01G214400 chr3B 266563873 266566893 3020 False 292.500000 451 88.839000 998 4732 2 chr3B.!!$F6 3734
2 TraesCS3B01G214400 chr3B 254777872 254781419 3547 False 234.500000 313 98.096500 756 3088 2 chr3B.!!$F5 2332
3 TraesCS3B01G214400 chr3D 175403844 175408355 4511 True 957.285714 2355 93.212000 930 5802 7 chr3D.!!$R1 4872
4 TraesCS3B01G214400 chr3D 185790122 185792808 2686 False 289.000000 446 88.393500 998 4732 2 chr3D.!!$F1 3734
5 TraesCS3B01G214400 chr3A 215474347 215482283 7936 True 560.777778 1079 90.992111 927 5700 9 chr3A.!!$R3 4773
6 TraesCS3B01G214400 chr4A 695304198 695306739 2541 False 850.000000 874 99.587500 1 927 2 chr4A.!!$F3 926

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
757 2373 3.050275 GTTGACGTGGCCAGCCTC 61.050 66.667 5.11 5.38 36.94 4.70 F
2184 6329 0.036294 GCTAGGGAAACAAGAGCCGT 60.036 55.000 0.00 0.00 0.00 5.68 F
2568 6779 0.038159 GAGCCTGCGTTGTGACTAGT 60.038 55.000 0.00 0.00 0.00 2.57 F
2602 6813 0.168348 GCGAGTCGACACTAAGCTGA 59.832 55.000 18.61 0.00 34.91 4.26 F
3012 7283 0.324091 TGAAGTACTCCCTCCGTCCC 60.324 60.000 0.00 0.00 0.00 4.46 F
3014 7285 0.338814 AAGTACTCCCTCCGTCCCAT 59.661 55.000 0.00 0.00 0.00 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2549 6760 0.038159 ACTAGTCACAACGCAGGCTC 60.038 55.000 0.00 0.00 0.00 4.70 R
3985 8421 0.179018 GGGCTCAAACCAGACACACT 60.179 55.000 0.00 0.00 0.00 3.55 R
4164 8608 1.544724 TGCAGCCAAATCAACCCTAC 58.455 50.000 0.00 0.00 0.00 3.18 R
4169 8613 4.142730 TGTTTTGTTTGCAGCCAAATCAAC 60.143 37.500 15.73 11.19 42.44 3.18 R
4669 9463 1.227674 GATCTGGCCGTCACCATCC 60.228 63.158 0.00 0.00 39.54 3.51 R
5151 10389 0.094558 TCGACGAAATGCGCAATCAC 59.905 50.000 17.11 11.68 46.04 3.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
739 2355 4.277423 CGAACACAAAGTTTACTTCCCCAT 59.723 41.667 0.00 0.00 41.51 4.00
756 2372 3.196207 ATGTTGACGTGGCCAGCCT 62.196 57.895 5.11 0.00 36.94 4.58
757 2373 3.050275 GTTGACGTGGCCAGCCTC 61.050 66.667 5.11 5.38 36.94 4.70
758 2374 3.241530 TTGACGTGGCCAGCCTCT 61.242 61.111 5.11 0.00 36.94 3.69
759 2375 3.535629 TTGACGTGGCCAGCCTCTG 62.536 63.158 5.11 5.75 36.94 3.35
838 3460 3.615056 CGTATGAGCACCGTATGAACAAA 59.385 43.478 0.00 0.00 0.00 2.83
1135 4310 8.410912 TGTACTACTATATGATTTGCACGACTT 58.589 33.333 0.00 0.00 0.00 3.01
1363 4631 1.302752 TCTTGCCAGCGCTGTCAAT 60.303 52.632 31.33 0.00 35.36 2.57
1444 4713 1.403323 CTGAGCTGTCTGTCATAGCGA 59.597 52.381 0.00 0.00 42.10 4.93
1445 4714 2.027385 TGAGCTGTCTGTCATAGCGAT 58.973 47.619 0.00 0.00 42.10 4.58
1446 4715 2.428530 TGAGCTGTCTGTCATAGCGATT 59.571 45.455 0.00 0.00 42.10 3.34
1447 4716 3.632145 TGAGCTGTCTGTCATAGCGATTA 59.368 43.478 0.00 0.00 42.10 1.75
1448 4717 4.225984 GAGCTGTCTGTCATAGCGATTAG 58.774 47.826 0.00 0.00 42.10 1.73
1480 4749 0.817634 CTGGCTGTTTGGTCGTTCCA 60.818 55.000 0.00 0.00 45.60 3.53
1483 4753 0.165944 GCTGTTTGGTCGTTCCATCG 59.834 55.000 3.33 0.00 46.60 3.84
1570 4848 7.173047 GGAAGAGATTGAATTATGAGAGAAGGC 59.827 40.741 0.00 0.00 0.00 4.35
1575 4853 2.246719 ATTATGAGAGAAGGCGGCAC 57.753 50.000 13.08 4.75 0.00 5.01
1707 5021 4.577283 GGGTCACTAGTCATCAGTCTCTAC 59.423 50.000 0.00 0.00 0.00 2.59
1708 5022 5.433526 GGTCACTAGTCATCAGTCTCTACT 58.566 45.833 0.00 0.00 35.91 2.57
1727 5043 8.444783 TCTCTACTCTCTAGATTTAGCTGGAAT 58.555 37.037 0.00 0.00 0.00 3.01
1921 5245 9.282569 TGATTAAATTTTGCATGGCTTAAACTT 57.717 25.926 0.00 0.00 0.00 2.66
2184 6329 0.036294 GCTAGGGAAACAAGAGCCGT 60.036 55.000 0.00 0.00 0.00 5.68
2185 6330 1.726853 CTAGGGAAACAAGAGCCGTG 58.273 55.000 0.00 0.00 0.00 4.94
2188 6333 1.235281 GGGAAACAAGAGCCGTGACC 61.235 60.000 0.00 0.00 0.00 4.02
2270 6481 8.761575 TTATTTCTCTTCCATGAAAACATTGC 57.238 30.769 0.00 0.00 36.06 3.56
2304 6515 5.890424 TTGGTTATGCAAAAGTACCTAGC 57.110 39.130 0.00 0.00 0.00 3.42
2328 6539 3.160269 AGGACCAAAATGCTTGAAGGAG 58.840 45.455 0.00 0.00 0.00 3.69
2346 6557 2.548904 GGAGCTGATCAGATGCATCAAC 59.451 50.000 25.29 15.40 35.19 3.18
2360 6571 2.289002 GCATCAACGATGGTCCTTGATC 59.711 50.000 6.14 0.00 40.10 2.92
2363 6574 2.168521 TCAACGATGGTCCTTGATCCTC 59.831 50.000 0.00 0.00 0.00 3.71
2381 6592 4.746466 TCCTCCAAAAACACCACCATTAT 58.254 39.130 0.00 0.00 0.00 1.28
2390 6601 4.423625 ACACCACCATTATTCTAGAGGC 57.576 45.455 0.00 0.00 0.00 4.70
2477 6688 1.754234 GGGCTGCCCATGGTAGTTG 60.754 63.158 32.46 0.00 44.65 3.16
2488 6699 4.407621 CCCATGGTAGTTGTGGTATCACTA 59.592 45.833 11.73 0.00 43.94 2.74
2489 6700 5.453339 CCCATGGTAGTTGTGGTATCACTAG 60.453 48.000 11.73 0.00 43.94 2.57
2490 6701 4.730949 TGGTAGTTGTGGTATCACTAGC 57.269 45.455 7.81 2.13 43.94 3.42
2491 6702 4.090819 TGGTAGTTGTGGTATCACTAGCA 58.909 43.478 7.81 4.79 43.94 3.49
2494 6705 4.142609 AGTTGTGGTATCACTAGCATGG 57.857 45.455 7.81 0.00 43.94 3.66
2495 6706 3.519510 AGTTGTGGTATCACTAGCATGGT 59.480 43.478 7.81 1.62 43.94 3.55
2496 6707 4.019321 AGTTGTGGTATCACTAGCATGGTT 60.019 41.667 7.81 0.00 43.94 3.67
2497 6708 4.568072 TGTGGTATCACTAGCATGGTTT 57.432 40.909 7.81 0.00 43.94 3.27
2498 6709 4.917385 TGTGGTATCACTAGCATGGTTTT 58.083 39.130 7.81 0.00 43.94 2.43
2499 6710 4.941263 TGTGGTATCACTAGCATGGTTTTC 59.059 41.667 7.81 0.00 43.94 2.29
2500 6711 4.034048 GTGGTATCACTAGCATGGTTTTCG 59.966 45.833 1.12 0.00 40.58 3.46
2502 6713 4.508124 GGTATCACTAGCATGGTTTTCGAG 59.492 45.833 1.12 0.00 0.00 4.04
2504 6715 3.585862 TCACTAGCATGGTTTTCGAGTC 58.414 45.455 1.12 0.00 0.00 3.36
2505 6716 3.006430 TCACTAGCATGGTTTTCGAGTCA 59.994 43.478 1.12 0.00 0.00 3.41
2506 6717 3.123621 CACTAGCATGGTTTTCGAGTCAC 59.876 47.826 1.12 0.00 0.00 3.67
2507 6718 1.148310 AGCATGGTTTTCGAGTCACG 58.852 50.000 0.00 0.00 44.09 4.35
2532 6743 2.028190 CGAGTCGCTATGGGGCAG 59.972 66.667 0.00 0.00 0.00 4.85
2538 6749 2.280457 GCTATGGGGCAGCGACTC 60.280 66.667 0.00 0.00 0.00 3.36
2540 6751 3.506059 CTATGGGGCAGCGACTCGG 62.506 68.421 0.00 0.00 0.00 4.63
2545 6756 2.261671 GGCAGCGACTCGGAAGAA 59.738 61.111 0.00 0.00 41.32 2.52
2546 6757 1.807573 GGCAGCGACTCGGAAGAAG 60.808 63.158 0.00 0.00 41.32 2.85
2547 6758 1.080434 GCAGCGACTCGGAAGAAGT 60.080 57.895 0.00 0.00 41.32 3.01
2548 6759 1.073768 GCAGCGACTCGGAAGAAGTC 61.074 60.000 0.00 0.00 41.32 3.01
2553 6764 4.796225 CTCGGAAGAAGTCGAGCC 57.204 61.111 0.00 0.00 44.68 4.70
2554 6765 2.185238 CTCGGAAGAAGTCGAGCCT 58.815 57.895 0.00 0.00 44.68 4.58
2555 6766 0.179150 CTCGGAAGAAGTCGAGCCTG 60.179 60.000 0.00 0.00 44.68 4.85
2556 6767 1.807573 CGGAAGAAGTCGAGCCTGC 60.808 63.158 0.00 0.00 0.00 4.85
2558 6769 1.080434 GAAGAAGTCGAGCCTGCGT 60.080 57.895 0.00 0.00 0.00 5.24
2559 6770 0.667792 GAAGAAGTCGAGCCTGCGTT 60.668 55.000 0.00 0.00 0.00 4.84
2560 6771 0.946221 AAGAAGTCGAGCCTGCGTTG 60.946 55.000 0.00 0.00 0.00 4.10
2561 6772 1.664965 GAAGTCGAGCCTGCGTTGT 60.665 57.895 0.00 0.00 0.00 3.32
2562 6773 1.891060 GAAGTCGAGCCTGCGTTGTG 61.891 60.000 0.00 0.00 0.00 3.33
2563 6774 2.355837 GTCGAGCCTGCGTTGTGA 60.356 61.111 0.00 0.00 0.00 3.58
2566 6777 1.080772 CGAGCCTGCGTTGTGACTA 60.081 57.895 0.00 0.00 0.00 2.59
2567 6778 1.073216 CGAGCCTGCGTTGTGACTAG 61.073 60.000 0.00 0.00 0.00 2.57
2568 6779 0.038159 GAGCCTGCGTTGTGACTAGT 60.038 55.000 0.00 0.00 0.00 2.57
2569 6780 0.038159 AGCCTGCGTTGTGACTAGTC 60.038 55.000 16.32 16.32 0.00 2.59
2581 6792 3.404224 TGACTAGTCACGACTCAGAGT 57.596 47.619 21.74 1.46 42.54 3.24
2582 6793 3.327626 TGACTAGTCACGACTCAGAGTC 58.672 50.000 21.74 19.43 41.48 3.36
2590 6801 1.059681 GACTCAGAGTCGCGAGTCG 59.940 63.158 32.03 26.38 46.20 4.18
2591 6802 1.352882 GACTCAGAGTCGCGAGTCGA 61.353 60.000 32.03 28.39 46.20 4.20
2599 6810 1.134075 TCGCGAGTCGACACTAAGC 59.866 57.895 18.61 13.51 43.16 3.09
2600 6811 1.134901 CGCGAGTCGACACTAAGCT 59.865 57.895 18.61 0.00 41.67 3.74
2601 6812 1.128724 CGCGAGTCGACACTAAGCTG 61.129 60.000 18.61 7.91 41.67 4.24
2602 6813 0.168348 GCGAGTCGACACTAAGCTGA 59.832 55.000 18.61 0.00 34.91 4.26
2603 6814 1.792273 GCGAGTCGACACTAAGCTGAG 60.792 57.143 18.61 0.00 34.91 3.35
2604 6815 1.465387 CGAGTCGACACTAAGCTGAGT 59.535 52.381 19.50 0.00 30.63 3.41
2605 6816 2.474856 CGAGTCGACACTAAGCTGAGTC 60.475 54.545 19.50 0.00 30.63 3.36
2609 6820 2.265647 GACACTAAGCTGAGTCGACC 57.734 55.000 13.01 4.42 0.00 4.79
2610 6821 1.540267 GACACTAAGCTGAGTCGACCA 59.460 52.381 13.01 9.18 0.00 4.02
2611 6822 2.164624 GACACTAAGCTGAGTCGACCAT 59.835 50.000 13.01 0.00 0.00 3.55
2612 6823 3.353557 ACACTAAGCTGAGTCGACCATA 58.646 45.455 13.01 0.00 0.00 2.74
2613 6824 3.954904 ACACTAAGCTGAGTCGACCATAT 59.045 43.478 13.01 0.00 0.00 1.78
2615 6826 5.105310 ACACTAAGCTGAGTCGACCATATTT 60.105 40.000 13.01 4.77 0.00 1.40
2616 6827 5.812642 CACTAAGCTGAGTCGACCATATTTT 59.187 40.000 13.01 3.16 0.00 1.82
2618 6829 5.551760 AAGCTGAGTCGACCATATTTTTG 57.448 39.130 13.01 0.00 0.00 2.44
2619 6830 3.375299 AGCTGAGTCGACCATATTTTTGC 59.625 43.478 13.01 7.80 0.00 3.68
2620 6831 3.785505 GCTGAGTCGACCATATTTTTGCG 60.786 47.826 13.01 0.00 0.00 4.85
2621 6832 3.591023 TGAGTCGACCATATTTTTGCGA 58.409 40.909 13.01 0.00 0.00 5.10
2622 6833 3.369756 TGAGTCGACCATATTTTTGCGAC 59.630 43.478 13.01 0.00 45.83 5.19
2624 6835 3.924610 GTCGACCATATTTTTGCGACTC 58.075 45.455 3.51 0.00 43.18 3.36
2626 6837 4.034048 GTCGACCATATTTTTGCGACTCAT 59.966 41.667 3.51 0.00 43.18 2.90
2627 6838 5.233476 GTCGACCATATTTTTGCGACTCATA 59.767 40.000 3.51 0.00 43.18 2.15
2628 6839 5.462068 TCGACCATATTTTTGCGACTCATAG 59.538 40.000 0.00 0.00 0.00 2.23
2629 6840 5.462068 CGACCATATTTTTGCGACTCATAGA 59.538 40.000 0.00 0.00 0.00 1.98
2630 6841 6.562270 CGACCATATTTTTGCGACTCATAGAC 60.562 42.308 0.00 0.00 0.00 2.59
2631 6842 6.349300 ACCATATTTTTGCGACTCATAGACT 58.651 36.000 0.00 0.00 0.00 3.24
2632 6843 7.497595 ACCATATTTTTGCGACTCATAGACTA 58.502 34.615 0.00 0.00 0.00 2.59
2633 6844 7.653713 ACCATATTTTTGCGACTCATAGACTAG 59.346 37.037 0.00 0.00 0.00 2.57
2634 6845 7.653713 CCATATTTTTGCGACTCATAGACTAGT 59.346 37.037 0.00 0.00 0.00 2.57
2635 6846 8.695284 CATATTTTTGCGACTCATAGACTAGTC 58.305 37.037 15.41 15.41 39.00 2.59
2710 6921 3.455327 TGAATGTGTTTGTTGGCATGTG 58.545 40.909 0.00 0.00 0.00 3.21
2713 6924 4.870123 ATGTGTTTGTTGGCATGTGTAT 57.130 36.364 0.00 0.00 0.00 2.29
2714 6925 3.974912 TGTGTTTGTTGGCATGTGTATG 58.025 40.909 0.00 0.00 37.36 2.39
2715 6926 3.633986 TGTGTTTGTTGGCATGTGTATGA 59.366 39.130 0.00 0.00 36.36 2.15
2716 6927 4.229096 GTGTTTGTTGGCATGTGTATGAG 58.771 43.478 0.00 0.00 36.36 2.90
2718 6929 3.431673 TTGTTGGCATGTGTATGAGGA 57.568 42.857 0.00 0.00 36.36 3.71
2719 6930 2.710377 TGTTGGCATGTGTATGAGGAC 58.290 47.619 0.00 0.00 36.36 3.85
2735 6949 9.996554 TGTATGAGGACATATGTTTATTGTAGG 57.003 33.333 10.30 0.00 40.45 3.18
2736 6950 9.436957 GTATGAGGACATATGTTTATTGTAGGG 57.563 37.037 10.30 0.00 40.45 3.53
2761 6975 4.534103 AGGTCTAAAGAAATGTCCTCTGCT 59.466 41.667 0.00 0.00 0.00 4.24
2782 6996 7.877612 TCTGCTACTTTGATTGTGTAGATTTGA 59.122 33.333 0.00 0.00 36.66 2.69
2847 7117 5.973565 GCTGATTATGTTAAAGGCATGACAC 59.026 40.000 0.00 0.00 0.00 3.67
2848 7118 6.404623 GCTGATTATGTTAAAGGCATGACACA 60.405 38.462 0.00 0.00 0.00 3.72
2869 7139 8.038862 ACACATGAACTTTCTAGGATCCATAT 57.961 34.615 15.82 0.00 0.00 1.78
2896 7166 8.571461 TCTTCTCTTGTATGATGAAAAGCAAT 57.429 30.769 0.00 0.00 0.00 3.56
2898 7168 9.713740 CTTCTCTTGTATGATGAAAAGCAATAC 57.286 33.333 0.00 0.00 0.00 1.89
2912 7182 9.039870 TGAAAAGCAATACCTGTTGTAAATTTG 57.960 29.630 0.00 0.00 31.94 2.32
2936 7206 9.745018 TTGAAGAGGATTCTCAAATATGTTTCT 57.255 29.630 3.21 0.00 42.34 2.52
2968 7239 7.172190 TGAAACTGTGAAAATGTTTTTCTTGCA 59.828 29.630 12.44 8.62 34.55 4.08
2982 7253 6.783892 TTTTCTTGCAATAGAAAACCATGC 57.216 33.333 18.17 0.00 44.77 4.06
2983 7254 5.465532 TTCTTGCAATAGAAAACCATGCA 57.534 34.783 0.00 0.00 44.54 3.96
2992 7263 7.545265 GCAATAGAAAACCATGCAACTGATTTA 59.455 33.333 0.00 0.00 37.00 1.40
3002 7273 7.066284 ACCATGCAACTGATTTATGAAGTACTC 59.934 37.037 0.00 0.00 0.00 2.59
3003 7274 6.985188 TGCAACTGATTTATGAAGTACTCC 57.015 37.500 0.00 0.00 0.00 3.85
3005 7276 6.116126 GCAACTGATTTATGAAGTACTCCCT 58.884 40.000 0.00 0.00 0.00 4.20
3006 7277 6.258947 GCAACTGATTTATGAAGTACTCCCTC 59.741 42.308 0.00 0.00 0.00 4.30
3008 7279 5.069251 ACTGATTTATGAAGTACTCCCTCCG 59.931 44.000 0.00 0.00 0.00 4.63
3009 7280 4.960469 TGATTTATGAAGTACTCCCTCCGT 59.040 41.667 0.00 0.00 0.00 4.69
3010 7281 4.996788 TTTATGAAGTACTCCCTCCGTC 57.003 45.455 0.00 0.00 0.00 4.79
3011 7282 1.777941 ATGAAGTACTCCCTCCGTCC 58.222 55.000 0.00 0.00 0.00 4.79
3012 7283 0.324091 TGAAGTACTCCCTCCGTCCC 60.324 60.000 0.00 0.00 0.00 4.46
3013 7284 0.324091 GAAGTACTCCCTCCGTCCCA 60.324 60.000 0.00 0.00 0.00 4.37
3014 7285 0.338814 AAGTACTCCCTCCGTCCCAT 59.661 55.000 0.00 0.00 0.00 4.00
3015 7286 1.229131 AGTACTCCCTCCGTCCCATA 58.771 55.000 0.00 0.00 0.00 2.74
3016 7287 1.572415 AGTACTCCCTCCGTCCCATAA 59.428 52.381 0.00 0.00 0.00 1.90
3017 7288 2.179424 AGTACTCCCTCCGTCCCATAAT 59.821 50.000 0.00 0.00 0.00 1.28
3018 7289 1.424638 ACTCCCTCCGTCCCATAATG 58.575 55.000 0.00 0.00 0.00 1.90
3019 7290 1.344087 ACTCCCTCCGTCCCATAATGT 60.344 52.381 0.00 0.00 0.00 2.71
3020 7291 2.090943 ACTCCCTCCGTCCCATAATGTA 60.091 50.000 0.00 0.00 0.00 2.29
3021 7292 2.969950 CTCCCTCCGTCCCATAATGTAA 59.030 50.000 0.00 0.00 0.00 2.41
3022 7293 2.969950 TCCCTCCGTCCCATAATGTAAG 59.030 50.000 0.00 0.00 0.00 2.34
3023 7294 2.969950 CCCTCCGTCCCATAATGTAAGA 59.030 50.000 0.00 0.00 0.00 2.10
3024 7295 3.583086 CCCTCCGTCCCATAATGTAAGAT 59.417 47.826 0.00 0.00 0.00 2.40
3025 7296 4.563580 CCCTCCGTCCCATAATGTAAGATG 60.564 50.000 0.00 0.00 0.00 2.90
3026 7297 4.040461 CCTCCGTCCCATAATGTAAGATGT 59.960 45.833 0.00 0.00 0.00 3.06
3027 7298 5.454755 CCTCCGTCCCATAATGTAAGATGTT 60.455 44.000 0.00 0.00 0.00 2.71
3028 7299 5.996644 TCCGTCCCATAATGTAAGATGTTT 58.003 37.500 0.00 0.00 0.00 2.83
3029 7300 6.419791 TCCGTCCCATAATGTAAGATGTTTT 58.580 36.000 0.00 0.00 0.00 2.43
3030 7301 6.887545 TCCGTCCCATAATGTAAGATGTTTTT 59.112 34.615 0.00 0.00 0.00 1.94
3076 7347 6.693315 AAAACATCTTACATTATGGGACGG 57.307 37.500 0.00 0.00 0.00 4.79
3077 7348 5.623956 AACATCTTACATTATGGGACGGA 57.376 39.130 0.00 0.00 0.00 4.69
3078 7349 5.215252 ACATCTTACATTATGGGACGGAG 57.785 43.478 0.00 0.00 0.00 4.63
3079 7350 4.040461 ACATCTTACATTATGGGACGGAGG 59.960 45.833 0.00 0.00 0.00 4.30
3080 7351 2.969950 TCTTACATTATGGGACGGAGGG 59.030 50.000 0.00 0.00 0.00 4.30
3081 7352 2.779429 TACATTATGGGACGGAGGGA 57.221 50.000 0.00 0.00 0.00 4.20
3082 7353 1.424638 ACATTATGGGACGGAGGGAG 58.575 55.000 0.00 0.00 0.00 4.30
3083 7354 1.344087 ACATTATGGGACGGAGGGAGT 60.344 52.381 0.00 0.00 0.00 3.85
3084 7355 2.090943 ACATTATGGGACGGAGGGAGTA 60.091 50.000 0.00 0.00 0.00 2.59
3085 7356 2.077687 TTATGGGACGGAGGGAGTAC 57.922 55.000 0.00 0.00 0.00 2.73
3086 7357 1.229131 TATGGGACGGAGGGAGTACT 58.771 55.000 0.00 0.00 0.00 2.73
3087 7358 0.338814 ATGGGACGGAGGGAGTACTT 59.661 55.000 0.00 0.00 0.00 2.24
3088 7359 0.613853 TGGGACGGAGGGAGTACTTG 60.614 60.000 0.00 0.00 0.00 3.16
3089 7360 1.516423 GGACGGAGGGAGTACTTGC 59.484 63.158 0.00 0.00 0.00 4.01
3090 7361 1.255667 GGACGGAGGGAGTACTTGCA 61.256 60.000 0.00 0.00 0.00 4.08
3091 7362 0.606604 GACGGAGGGAGTACTTGCAA 59.393 55.000 0.00 0.00 0.00 4.08
3092 7363 0.608640 ACGGAGGGAGTACTTGCAAG 59.391 55.000 24.84 24.84 0.00 4.01
3112 7383 5.495502 CAAGTCAAAACAAATCTTTGCTGC 58.504 37.500 2.63 0.00 41.79 5.25
3119 7390 3.853475 ACAAATCTTTGCTGCAATAGGC 58.147 40.909 16.77 0.00 41.79 3.93
3131 7402 4.139786 CTGCAATAGGCCACATGTCTTAT 58.860 43.478 5.01 0.00 43.89 1.73
3182 7453 5.290885 TGATCAAGTCGATGGAATGTTTACG 59.709 40.000 0.00 0.00 33.17 3.18
3183 7454 4.562082 TCAAGTCGATGGAATGTTTACGT 58.438 39.130 0.00 0.00 0.00 3.57
3214 7485 9.574516 ACTTTTCTGGATAGTTGTATTTCAAGT 57.425 29.630 0.00 0.00 41.81 3.16
3218 7489 9.871238 TTCTGGATAGTTGTATTTCAAGTACTC 57.129 33.333 0.00 0.00 42.45 2.59
3219 7490 9.031537 TCTGGATAGTTGTATTTCAAGTACTCA 57.968 33.333 0.00 0.00 42.45 3.41
3220 7491 9.653287 CTGGATAGTTGTATTTCAAGTACTCAA 57.347 33.333 0.00 0.00 42.45 3.02
3221 7492 9.653287 TGGATAGTTGTATTTCAAGTACTCAAG 57.347 33.333 0.00 0.00 42.45 3.02
3222 7493 8.604890 GGATAGTTGTATTTCAAGTACTCAAGC 58.395 37.037 0.00 0.00 42.45 4.01
3223 7494 6.803154 AGTTGTATTTCAAGTACTCAAGCC 57.197 37.500 0.00 0.00 37.86 4.35
3224 7495 6.534634 AGTTGTATTTCAAGTACTCAAGCCT 58.465 36.000 0.00 0.00 37.86 4.58
3225 7496 6.998673 AGTTGTATTTCAAGTACTCAAGCCTT 59.001 34.615 0.00 0.00 37.86 4.35
3226 7497 6.801539 TGTATTTCAAGTACTCAAGCCTTG 57.198 37.500 0.00 0.00 37.51 3.61
3227 7498 6.530120 TGTATTTCAAGTACTCAAGCCTTGA 58.470 36.000 7.00 7.00 41.95 3.02
3230 7501 5.947228 TTCAAGTACTCAAGCCTTGAATG 57.053 39.130 8.74 0.31 45.38 2.67
3231 7502 4.973168 TCAAGTACTCAAGCCTTGAATGT 58.027 39.130 8.74 6.59 41.03 2.71
3232 7503 5.376625 TCAAGTACTCAAGCCTTGAATGTT 58.623 37.500 8.74 0.00 41.03 2.71
3233 7504 5.470098 TCAAGTACTCAAGCCTTGAATGTTC 59.530 40.000 8.74 2.41 41.03 3.18
3234 7505 5.234466 AGTACTCAAGCCTTGAATGTTCT 57.766 39.130 8.74 4.62 39.58 3.01
3235 7506 5.625150 AGTACTCAAGCCTTGAATGTTCTT 58.375 37.500 8.74 0.00 39.58 2.52
3236 7507 5.703130 AGTACTCAAGCCTTGAATGTTCTTC 59.297 40.000 8.74 0.00 39.58 2.87
3237 7508 4.723309 ACTCAAGCCTTGAATGTTCTTCT 58.277 39.130 8.74 0.00 39.58 2.85
3238 7509 5.869579 ACTCAAGCCTTGAATGTTCTTCTA 58.130 37.500 8.74 0.00 39.58 2.10
3239 7510 5.936956 ACTCAAGCCTTGAATGTTCTTCTAG 59.063 40.000 8.74 0.00 39.58 2.43
3240 7511 5.869579 TCAAGCCTTGAATGTTCTTCTAGT 58.130 37.500 4.27 0.00 36.59 2.57
3241 7512 5.702670 TCAAGCCTTGAATGTTCTTCTAGTG 59.297 40.000 4.27 0.00 36.59 2.74
3242 7513 4.006319 AGCCTTGAATGTTCTTCTAGTGC 58.994 43.478 0.00 0.00 0.00 4.40
3243 7514 3.127721 GCCTTGAATGTTCTTCTAGTGCC 59.872 47.826 0.00 0.00 0.00 5.01
3244 7515 4.326826 CCTTGAATGTTCTTCTAGTGCCA 58.673 43.478 0.00 0.00 0.00 4.92
3245 7516 4.761739 CCTTGAATGTTCTTCTAGTGCCAA 59.238 41.667 0.00 0.00 0.00 4.52
3246 7517 5.241506 CCTTGAATGTTCTTCTAGTGCCAAA 59.758 40.000 0.00 0.00 0.00 3.28
3247 7518 6.239008 CCTTGAATGTTCTTCTAGTGCCAAAA 60.239 38.462 0.00 0.00 0.00 2.44
3248 7519 6.707440 TGAATGTTCTTCTAGTGCCAAAAA 57.293 33.333 0.00 0.00 0.00 1.94
3271 7542 3.720949 CGTCTTACATTATGGGACGGA 57.279 47.619 20.50 2.30 43.69 4.69
3272 7543 3.639538 CGTCTTACATTATGGGACGGAG 58.360 50.000 20.50 2.74 43.69 4.63
3273 7544 3.552273 CGTCTTACATTATGGGACGGAGG 60.552 52.174 20.50 5.87 43.69 4.30
3274 7545 2.969950 TCTTACATTATGGGACGGAGGG 59.030 50.000 0.00 0.00 0.00 4.30
3275 7546 2.779429 TACATTATGGGACGGAGGGA 57.221 50.000 0.00 0.00 0.00 4.20
3276 7547 1.424638 ACATTATGGGACGGAGGGAG 58.575 55.000 0.00 0.00 0.00 4.30
3277 7548 1.344087 ACATTATGGGACGGAGGGAGT 60.344 52.381 0.00 0.00 0.00 3.85
3278 7549 2.090943 ACATTATGGGACGGAGGGAGTA 60.091 50.000 0.00 0.00 0.00 2.59
3279 7550 2.077687 TTATGGGACGGAGGGAGTAC 57.922 55.000 0.00 0.00 0.00 2.73
3280 7551 1.229131 TATGGGACGGAGGGAGTACT 58.771 55.000 0.00 0.00 0.00 2.73
3281 7552 0.338814 ATGGGACGGAGGGAGTACTT 59.661 55.000 0.00 0.00 0.00 2.24
3282 7553 0.613853 TGGGACGGAGGGAGTACTTG 60.614 60.000 0.00 0.00 0.00 3.16
3283 7554 1.516423 GGACGGAGGGAGTACTTGC 59.484 63.158 0.00 0.00 0.00 4.01
3284 7555 1.255667 GGACGGAGGGAGTACTTGCA 61.256 60.000 0.00 0.00 0.00 4.08
3285 7556 0.606604 GACGGAGGGAGTACTTGCAA 59.393 55.000 0.00 0.00 0.00 4.08
3286 7557 0.608640 ACGGAGGGAGTACTTGCAAG 59.391 55.000 24.84 24.84 0.00 4.01
3287 7558 0.608640 CGGAGGGAGTACTTGCAAGT 59.391 55.000 32.97 32.97 42.91 3.16
3288 7559 1.404315 CGGAGGGAGTACTTGCAAGTC 60.404 57.143 34.29 23.97 40.37 3.01
3289 7560 1.623811 GGAGGGAGTACTTGCAAGTCA 59.376 52.381 34.29 18.11 40.37 3.41
3290 7561 2.038557 GGAGGGAGTACTTGCAAGTCAA 59.961 50.000 34.29 16.65 40.37 3.18
3291 7562 3.496160 GGAGGGAGTACTTGCAAGTCAAA 60.496 47.826 34.29 15.87 40.37 2.69
3292 7563 4.134563 GAGGGAGTACTTGCAAGTCAAAA 58.865 43.478 34.29 15.48 40.37 2.44
3293 7564 3.883489 AGGGAGTACTTGCAAGTCAAAAC 59.117 43.478 34.29 25.45 40.37 2.43
3294 7565 3.630312 GGGAGTACTTGCAAGTCAAAACA 59.370 43.478 34.29 14.30 40.37 2.83
3295 7566 4.097286 GGGAGTACTTGCAAGTCAAAACAA 59.903 41.667 34.29 13.53 40.37 2.83
3296 7567 5.393678 GGGAGTACTTGCAAGTCAAAACAAA 60.394 40.000 34.29 12.76 40.37 2.83
3297 7568 6.273071 GGAGTACTTGCAAGTCAAAACAAAT 58.727 36.000 34.29 15.29 40.37 2.32
3298 7569 6.417930 GGAGTACTTGCAAGTCAAAACAAATC 59.582 38.462 34.29 22.07 40.37 2.17
3299 7570 7.100458 AGTACTTGCAAGTCAAAACAAATCT 57.900 32.000 34.29 14.51 40.37 2.40
3300 7571 7.547227 AGTACTTGCAAGTCAAAACAAATCTT 58.453 30.769 34.29 8.27 40.37 2.40
3301 7572 8.034804 AGTACTTGCAAGTCAAAACAAATCTTT 58.965 29.630 34.29 7.78 40.37 2.52
3302 7573 7.064060 ACTTGCAAGTCAAAACAAATCTTTG 57.936 32.000 26.36 1.19 38.29 2.77
3303 7574 5.467902 TGCAAGTCAAAACAAATCTTTGC 57.532 34.783 2.63 0.00 41.79 3.68
3304 7575 5.177326 TGCAAGTCAAAACAAATCTTTGCT 58.823 33.333 2.63 0.00 41.79 3.91
3305 7576 5.063691 TGCAAGTCAAAACAAATCTTTGCTG 59.936 36.000 2.63 0.00 41.79 4.41
3306 7577 5.063817 GCAAGTCAAAACAAATCTTTGCTGT 59.936 36.000 2.63 0.00 41.79 4.40
3307 7578 6.255453 GCAAGTCAAAACAAATCTTTGCTGTA 59.745 34.615 2.63 0.00 41.79 2.74
3308 7579 7.201513 GCAAGTCAAAACAAATCTTTGCTGTAA 60.202 33.333 2.63 0.00 41.79 2.41
3309 7580 8.819974 CAAGTCAAAACAAATCTTTGCTGTAAT 58.180 29.630 2.63 0.00 41.79 1.89
3311 7582 9.683069 AGTCAAAACAAATCTTTGCTGTAATAG 57.317 29.630 2.63 0.00 41.79 1.73
3312 7583 8.915654 GTCAAAACAAATCTTTGCTGTAATAGG 58.084 33.333 2.63 0.00 41.79 2.57
3313 7584 7.598493 TCAAAACAAATCTTTGCTGTAATAGGC 59.402 33.333 2.63 0.00 41.79 3.93
3314 7585 5.582689 ACAAATCTTTGCTGTAATAGGCC 57.417 39.130 0.00 0.00 41.79 5.19
3315 7586 5.016173 ACAAATCTTTGCTGTAATAGGCCA 58.984 37.500 5.01 0.00 41.79 5.36
3316 7587 5.105756 ACAAATCTTTGCTGTAATAGGCCAC 60.106 40.000 5.01 0.00 41.79 5.01
3317 7588 3.712016 TCTTTGCTGTAATAGGCCACA 57.288 42.857 5.01 0.00 0.00 4.17
3318 7589 4.235079 TCTTTGCTGTAATAGGCCACAT 57.765 40.909 5.01 0.00 0.00 3.21
3319 7590 3.947196 TCTTTGCTGTAATAGGCCACATG 59.053 43.478 5.01 0.00 0.00 3.21
3320 7591 3.364460 TTGCTGTAATAGGCCACATGT 57.636 42.857 5.01 0.00 0.00 3.21
3321 7592 2.917933 TGCTGTAATAGGCCACATGTC 58.082 47.619 5.01 0.00 0.00 3.06
3322 7593 2.505407 TGCTGTAATAGGCCACATGTCT 59.495 45.455 5.01 0.00 0.00 3.41
3323 7594 3.054434 TGCTGTAATAGGCCACATGTCTT 60.054 43.478 5.01 0.00 0.00 3.01
3324 7595 4.163268 TGCTGTAATAGGCCACATGTCTTA 59.837 41.667 5.01 0.00 0.00 2.10
3325 7596 5.163205 TGCTGTAATAGGCCACATGTCTTAT 60.163 40.000 5.01 0.00 0.00 1.73
3326 7597 5.765182 GCTGTAATAGGCCACATGTCTTATT 59.235 40.000 5.01 1.35 0.00 1.40
3327 7598 6.073003 GCTGTAATAGGCCACATGTCTTATTC 60.073 42.308 5.01 0.00 0.00 1.75
3328 7599 7.136822 TGTAATAGGCCACATGTCTTATTCT 57.863 36.000 5.01 0.00 0.00 2.40
3329 7600 7.573710 TGTAATAGGCCACATGTCTTATTCTT 58.426 34.615 5.01 0.00 0.00 2.52
3330 7601 7.715249 TGTAATAGGCCACATGTCTTATTCTTC 59.285 37.037 5.01 0.00 0.00 2.87
3331 7602 4.851639 AGGCCACATGTCTTATTCTTCT 57.148 40.909 5.01 0.00 0.00 2.85
3332 7603 5.957771 AGGCCACATGTCTTATTCTTCTA 57.042 39.130 5.01 0.00 0.00 2.10
3333 7604 6.506538 AGGCCACATGTCTTATTCTTCTAT 57.493 37.500 5.01 0.00 0.00 1.98
3334 7605 6.529220 AGGCCACATGTCTTATTCTTCTATC 58.471 40.000 5.01 0.00 0.00 2.08
3335 7606 6.328672 AGGCCACATGTCTTATTCTTCTATCT 59.671 38.462 5.01 0.00 0.00 1.98
3336 7607 6.426328 GGCCACATGTCTTATTCTTCTATCTG 59.574 42.308 0.00 0.00 0.00 2.90
3337 7608 6.989169 GCCACATGTCTTATTCTTCTATCTGT 59.011 38.462 0.00 0.00 0.00 3.41
3338 7609 7.497249 GCCACATGTCTTATTCTTCTATCTGTT 59.503 37.037 0.00 0.00 0.00 3.16
3339 7610 9.388506 CCACATGTCTTATTCTTCTATCTGTTT 57.611 33.333 0.00 0.00 0.00 2.83
3341 7612 9.388506 ACATGTCTTATTCTTCTATCTGTTTGG 57.611 33.333 0.00 0.00 0.00 3.28
3342 7613 8.834465 CATGTCTTATTCTTCTATCTGTTTGGG 58.166 37.037 0.00 0.00 0.00 4.12
3343 7614 6.823689 TGTCTTATTCTTCTATCTGTTTGGGC 59.176 38.462 0.00 0.00 0.00 5.36
3344 7615 7.051000 GTCTTATTCTTCTATCTGTTTGGGCT 58.949 38.462 0.00 0.00 0.00 5.19
3345 7616 7.554476 GTCTTATTCTTCTATCTGTTTGGGCTT 59.446 37.037 0.00 0.00 0.00 4.35
3346 7617 8.109634 TCTTATTCTTCTATCTGTTTGGGCTTT 58.890 33.333 0.00 0.00 0.00 3.51
3347 7618 8.650143 TTATTCTTCTATCTGTTTGGGCTTTT 57.350 30.769 0.00 0.00 0.00 2.27
3348 7619 5.964958 TCTTCTATCTGTTTGGGCTTTTG 57.035 39.130 0.00 0.00 0.00 2.44
3349 7620 4.766891 TCTTCTATCTGTTTGGGCTTTTGG 59.233 41.667 0.00 0.00 0.00 3.28
3350 7621 4.112634 TCTATCTGTTTGGGCTTTTGGT 57.887 40.909 0.00 0.00 0.00 3.67
3351 7622 5.249780 TCTATCTGTTTGGGCTTTTGGTA 57.750 39.130 0.00 0.00 0.00 3.25
3352 7623 5.007682 TCTATCTGTTTGGGCTTTTGGTAC 58.992 41.667 0.00 0.00 0.00 3.34
3353 7624 3.306472 TCTGTTTGGGCTTTTGGTACT 57.694 42.857 0.00 0.00 0.00 2.73
3354 7625 2.955660 TCTGTTTGGGCTTTTGGTACTG 59.044 45.455 0.00 0.00 0.00 2.74
3355 7626 2.955660 CTGTTTGGGCTTTTGGTACTGA 59.044 45.455 0.00 0.00 0.00 3.41
3356 7627 3.571590 TGTTTGGGCTTTTGGTACTGAT 58.428 40.909 0.00 0.00 0.00 2.90
3357 7628 3.572255 TGTTTGGGCTTTTGGTACTGATC 59.428 43.478 0.00 0.00 0.00 2.92
3358 7629 3.517296 TTGGGCTTTTGGTACTGATCA 57.483 42.857 0.00 0.00 0.00 2.92
3359 7630 3.517296 TGGGCTTTTGGTACTGATCAA 57.483 42.857 0.00 0.00 0.00 2.57
3360 7631 3.420893 TGGGCTTTTGGTACTGATCAAG 58.579 45.455 0.00 0.00 0.00 3.02
3361 7632 3.181434 TGGGCTTTTGGTACTGATCAAGT 60.181 43.478 0.00 0.00 43.40 3.16
3362 7633 3.440522 GGGCTTTTGGTACTGATCAAGTC 59.559 47.826 0.00 0.00 40.56 3.01
3363 7634 3.440522 GGCTTTTGGTACTGATCAAGTCC 59.559 47.826 0.00 0.00 40.56 3.85
3364 7635 4.072131 GCTTTTGGTACTGATCAAGTCCA 58.928 43.478 0.00 2.65 40.56 4.02
3365 7636 4.702131 GCTTTTGGTACTGATCAAGTCCAT 59.298 41.667 11.46 0.00 40.56 3.41
3366 7637 5.392380 GCTTTTGGTACTGATCAAGTCCATG 60.392 44.000 11.46 0.00 40.56 3.66
3367 7638 3.912496 TGGTACTGATCAAGTCCATGG 57.088 47.619 4.97 4.97 40.56 3.66
3368 7639 3.449918 TGGTACTGATCAAGTCCATGGA 58.550 45.455 11.44 11.44 40.56 3.41
3369 7640 3.843619 TGGTACTGATCAAGTCCATGGAA 59.156 43.478 18.20 0.00 40.56 3.53
3370 7641 4.474651 TGGTACTGATCAAGTCCATGGAAT 59.525 41.667 18.20 13.77 40.56 3.01
3371 7642 4.818546 GGTACTGATCAAGTCCATGGAATG 59.181 45.833 18.20 18.42 41.55 2.67
3372 7643 4.581309 ACTGATCAAGTCCATGGAATGT 57.419 40.909 18.20 5.31 44.81 2.71
3373 7644 4.927049 ACTGATCAAGTCCATGGAATGTT 58.073 39.130 18.20 13.46 44.81 2.71
3374 7645 5.327732 ACTGATCAAGTCCATGGAATGTTT 58.672 37.500 18.20 10.68 44.81 2.83
3375 7646 6.484288 ACTGATCAAGTCCATGGAATGTTTA 58.516 36.000 18.20 9.59 44.81 2.01
3376 7647 6.375455 ACTGATCAAGTCCATGGAATGTTTAC 59.625 38.462 18.20 2.21 44.81 2.01
3377 7648 5.353956 TGATCAAGTCCATGGAATGTTTACG 59.646 40.000 18.20 0.98 44.81 3.18
3378 7649 4.647611 TCAAGTCCATGGAATGTTTACGT 58.352 39.130 18.20 0.00 44.81 3.57
3379 7650 5.795972 TCAAGTCCATGGAATGTTTACGTA 58.204 37.500 18.20 0.00 44.81 3.57
3380 7651 6.231951 TCAAGTCCATGGAATGTTTACGTAA 58.768 36.000 18.20 3.29 44.81 3.18
3381 7652 6.711194 TCAAGTCCATGGAATGTTTACGTAAA 59.289 34.615 18.20 16.59 44.81 2.01
3382 7653 7.392113 TCAAGTCCATGGAATGTTTACGTAAAT 59.608 33.333 22.65 8.13 44.81 1.40
3383 7654 8.670135 CAAGTCCATGGAATGTTTACGTAAATA 58.330 33.333 22.65 20.30 44.81 1.40
3384 7655 8.205131 AGTCCATGGAATGTTTACGTAAATAC 57.795 34.615 22.65 12.87 44.81 1.89
3385 7656 8.044908 AGTCCATGGAATGTTTACGTAAATACT 58.955 33.333 22.65 11.16 44.81 2.12
3386 7657 8.671028 GTCCATGGAATGTTTACGTAAATACTT 58.329 33.333 22.65 15.70 44.81 2.24
3387 7658 9.233649 TCCATGGAATGTTTACGTAAATACTTT 57.766 29.630 22.65 15.32 44.81 2.66
3388 7659 9.849166 CCATGGAATGTTTACGTAAATACTTTT 57.151 29.630 22.65 11.96 44.81 2.27
3392 7663 9.550811 GGAATGTTTACGTAAATACTTTTCTGG 57.449 33.333 22.65 0.00 0.00 3.86
3439 7710 8.653338 CAAGCCTTGAATGTTCTTATGAAATTG 58.347 33.333 0.00 0.00 33.52 2.32
3485 7756 4.810191 TTGTGTTTGTTTGCTACCCTTT 57.190 36.364 0.00 0.00 0.00 3.11
3493 7764 7.870445 TGTTTGTTTGCTACCCTTTAATGATTC 59.130 33.333 0.00 0.00 0.00 2.52
3610 7881 9.995003 ATAGCTGAAATGATCTCTAAAGGTTAG 57.005 33.333 0.00 0.00 0.00 2.34
3647 7926 3.512033 TTTGTGTCCTTTGAAAACCCG 57.488 42.857 0.00 0.00 0.00 5.28
3805 8120 2.473984 GCTGCTTGTGTTTTTCTGCATC 59.526 45.455 0.00 0.00 0.00 3.91
3849 8164 5.122396 CCACCTAATAGTCAGTGTTTCAAGC 59.878 44.000 0.00 0.00 0.00 4.01
3859 8174 0.749818 TGTTTCAAGCGGGCAAGTCA 60.750 50.000 0.00 0.00 0.00 3.41
3911 8240 5.110814 AGTCTGACTACTCTAGATGCTGT 57.889 43.478 8.91 0.00 0.00 4.40
3974 8410 1.133025 CAGGCTGGCAATAGGTTTTCG 59.867 52.381 6.61 0.00 0.00 3.46
3985 8421 6.759827 GGCAATAGGTTTTCGAGTCATACTTA 59.240 38.462 0.00 0.00 0.00 2.24
4119 8563 7.432869 CAAGGTCATACCAAATTTTTGTCAGA 58.567 34.615 0.00 0.00 41.95 3.27
4140 8584 4.590222 AGACATCCAAGCAAGAACCAAAAT 59.410 37.500 0.00 0.00 0.00 1.82
4153 8597 6.966534 AGAACCAAAATTTCAGTCATGACT 57.033 33.333 22.89 22.89 43.61 3.41
4179 8623 3.763897 ACAATCAGTAGGGTTGATTTGGC 59.236 43.478 0.00 0.00 41.91 4.52
4190 8634 3.376546 GGTTGATTTGGCTGCAAACAAAA 59.623 39.130 16.44 5.65 39.69 2.44
4205 8649 6.027749 GCAAACAAAACATTCCTATAGTCCG 58.972 40.000 0.00 0.00 0.00 4.79
4220 8664 6.769822 CCTATAGTCCGTGTTAAGACCTCTTA 59.230 42.308 0.00 0.00 37.40 2.10
4227 8671 6.046593 CCGTGTTAAGACCTCTTATATTGCA 58.953 40.000 0.00 0.00 38.16 4.08
4228 8672 6.706270 CCGTGTTAAGACCTCTTATATTGCAT 59.294 38.462 0.00 0.00 38.16 3.96
4245 8689 5.710513 TTGCATACAGAAGTGAATTGCTT 57.289 34.783 0.00 0.00 31.80 3.91
4290 8734 7.320443 TCATTCTTGCACAGTATTACCATTC 57.680 36.000 0.00 0.00 0.00 2.67
4294 8738 8.437360 TTCTTGCACAGTATTACCATTCTATG 57.563 34.615 0.00 0.00 0.00 2.23
4749 9543 4.038642 AGCTGCCATACTAAGCTAGTTCTC 59.961 45.833 0.00 0.00 45.26 2.87
4750 9544 4.038642 GCTGCCATACTAAGCTAGTTCTCT 59.961 45.833 0.00 0.00 40.14 3.10
4751 9545 5.768317 CTGCCATACTAAGCTAGTTCTCTC 58.232 45.833 0.00 0.00 40.14 3.20
4752 9546 5.450453 TGCCATACTAAGCTAGTTCTCTCT 58.550 41.667 0.00 0.00 40.14 3.10
4753 9547 5.894393 TGCCATACTAAGCTAGTTCTCTCTT 59.106 40.000 0.00 0.00 40.14 2.85
4754 9548 6.381420 TGCCATACTAAGCTAGTTCTCTCTTT 59.619 38.462 0.00 0.00 40.14 2.52
4755 9549 7.093289 TGCCATACTAAGCTAGTTCTCTCTTTT 60.093 37.037 0.00 0.00 40.14 2.27
4756 9550 7.766738 GCCATACTAAGCTAGTTCTCTCTTTTT 59.233 37.037 0.00 0.00 40.14 1.94
4764 9558 8.996024 AGCTAGTTCTCTCTTTTTAGATGAAC 57.004 34.615 0.00 0.00 35.79 3.18
4765 9559 8.811994 AGCTAGTTCTCTCTTTTTAGATGAACT 58.188 33.333 18.53 18.53 41.50 3.01
4769 9563 9.430623 AGTTCTCTCTTTTTAGATGAACTAAGC 57.569 33.333 15.56 0.00 39.49 3.09
4770 9564 9.430623 GTTCTCTCTTTTTAGATGAACTAAGCT 57.569 33.333 0.00 0.00 41.33 3.74
4822 9616 2.287248 GCCTTGAAAACTGACAGCACTC 60.287 50.000 1.25 0.00 0.00 3.51
4862 9656 2.677836 AGTGAATGAACATATTGCGCGT 59.322 40.909 8.43 0.00 0.00 6.01
4863 9657 2.777845 GTGAATGAACATATTGCGCGTG 59.222 45.455 8.43 0.00 0.00 5.34
4867 9665 1.202020 TGAACATATTGCGCGTGCTTC 60.202 47.619 23.16 15.92 43.34 3.86
4939 9737 5.959618 ACCTTTGTACAATGTAGCTTTCC 57.040 39.130 9.56 0.00 0.00 3.13
4966 9764 7.262772 TCCAAATTGAGATCATGAATTTGCTC 58.737 34.615 18.32 12.32 42.13 4.26
4975 9773 8.921353 AGATCATGAATTTGCTCTAGCTTATT 57.079 30.769 0.00 3.11 42.66 1.40
4977 9775 8.921353 ATCATGAATTTGCTCTAGCTTATTCT 57.079 30.769 20.17 10.41 39.69 2.40
5020 9841 5.953183 TGGATGTCTGATATTTTTGTGTGC 58.047 37.500 0.00 0.00 0.00 4.57
5037 9858 2.542178 TGTGCGTGTGTGTTATCAACTC 59.458 45.455 0.00 0.00 0.00 3.01
5151 10389 3.867493 TGAAAAGCTGACTGCAGATATCG 59.133 43.478 23.35 5.61 45.17 2.92
5481 14199 6.770746 ATCTCAAGCAAGCATTATTCAACT 57.229 33.333 0.00 0.00 0.00 3.16
5482 14200 7.870509 ATCTCAAGCAAGCATTATTCAACTA 57.129 32.000 0.00 0.00 0.00 2.24
5483 14201 7.312657 TCTCAAGCAAGCATTATTCAACTAG 57.687 36.000 0.00 0.00 0.00 2.57
5578 14298 7.875554 TCCCCAGCAAATAAAATACTTTTCAAC 59.124 33.333 0.00 0.00 34.19 3.18
5679 14403 1.898574 CCTGCACGGAAAGGCTTGT 60.899 57.895 0.00 0.00 33.16 3.16
5762 14486 6.327934 TCACAGCGAACCTAGTTATAAGTTC 58.672 40.000 0.00 2.14 36.19 3.01
5763 14487 5.519206 CACAGCGAACCTAGTTATAAGTTCC 59.481 44.000 0.00 0.00 36.16 3.62
5772 14496 6.677076 ACCTAGTTATAAGTTCCATTCCCTGT 59.323 38.462 0.00 0.00 0.00 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
739 2355 3.825160 GAGGCTGGCCACGTCAACA 62.825 63.158 14.39 0.00 38.92 3.33
756 2372 2.745821 ACATACGAGTTCGCTGTACAGA 59.254 45.455 27.08 3.62 44.43 3.41
757 2373 3.132629 ACATACGAGTTCGCTGTACAG 57.867 47.619 18.93 18.93 44.43 2.74
758 2374 3.564235 AACATACGAGTTCGCTGTACA 57.436 42.857 9.72 0.00 44.43 2.90
759 2375 3.916172 TGAAACATACGAGTTCGCTGTAC 59.084 43.478 9.72 8.38 44.43 2.90
1135 4310 2.813042 TGCGCGCACATCGAATGA 60.813 55.556 33.09 2.14 41.67 2.57
1448 4717 3.808656 GCCAGCTGAAGCCTTCGC 61.809 66.667 17.39 11.59 43.38 4.70
1449 4718 2.046507 AGCCAGCTGAAGCCTTCG 60.047 61.111 17.39 0.00 43.38 3.79
1450 4719 0.892814 AACAGCCAGCTGAAGCCTTC 60.893 55.000 25.66 0.00 46.30 3.46
1480 4749 2.102252 GCTCCACTGAAAGAGATCCGAT 59.898 50.000 0.00 0.00 37.43 4.18
1483 4753 3.006247 GTTGCTCCACTGAAAGAGATCC 58.994 50.000 0.00 0.00 37.43 3.36
1588 4866 0.106149 GGTAGACCCATGCTAACCGG 59.894 60.000 0.00 0.00 0.00 5.28
1727 5043 2.566529 CGCACCTCGTCACTGCTA 59.433 61.111 0.00 0.00 0.00 3.49
1746 5062 2.234300 AACCCTAACACCATATCGCG 57.766 50.000 0.00 0.00 0.00 5.87
1751 5067 7.737607 ACATGATCCTATAACCCTAACACCATA 59.262 37.037 0.00 0.00 0.00 2.74
1752 5068 6.562608 ACATGATCCTATAACCCTAACACCAT 59.437 38.462 0.00 0.00 0.00 3.55
1921 5245 5.532032 TGCATTCACTGAGAAGAAAATGTGA 59.468 36.000 0.00 0.00 40.15 3.58
2184 6329 4.707934 TCTTAACCAGTATGATCACGGTCA 59.292 41.667 0.00 0.00 39.69 4.02
2185 6330 5.258456 TCTTAACCAGTATGATCACGGTC 57.742 43.478 0.00 0.00 39.69 4.79
2188 6333 7.953158 ATCAATCTTAACCAGTATGATCACG 57.047 36.000 0.00 0.00 39.69 4.35
2249 6460 4.588106 TGGCAATGTTTTCATGGAAGAGAA 59.412 37.500 0.00 0.00 40.79 2.87
2304 6515 3.555586 CCTTCAAGCATTTTGGTCCTTGG 60.556 47.826 0.00 0.00 36.30 3.61
2328 6539 2.207590 TCGTTGATGCATCTGATCAGC 58.792 47.619 26.32 8.18 31.52 4.26
2346 6557 1.123077 TGGAGGATCAAGGACCATCG 58.877 55.000 0.00 0.00 36.25 3.84
2360 6571 5.245977 AGAATAATGGTGGTGTTTTTGGAGG 59.754 40.000 0.00 0.00 0.00 4.30
2363 6574 7.362920 CCTCTAGAATAATGGTGGTGTTTTTGG 60.363 40.741 0.00 0.00 0.00 3.28
2381 6592 2.124277 TCTGTACGCAGCCTCTAGAA 57.876 50.000 0.00 0.00 42.29 2.10
2390 6601 2.069273 CTTTGGGTCTTCTGTACGCAG 58.931 52.381 0.00 0.00 40.36 5.18
2416 6627 3.400054 GGGTCCAGGGAAGGGTCG 61.400 72.222 0.00 0.00 0.00 4.79
2443 6654 1.910722 CCCAGTGCACATAGCTCCT 59.089 57.895 21.04 0.00 45.94 3.69
2468 6679 4.714802 TGCTAGTGATACCACAACTACCAT 59.285 41.667 0.00 0.00 45.54 3.55
2472 6683 4.714802 ACCATGCTAGTGATACCACAACTA 59.285 41.667 0.00 0.00 45.54 2.24
2477 6688 4.034048 CGAAAACCATGCTAGTGATACCAC 59.966 45.833 0.00 0.00 43.50 4.16
2488 6699 1.148310 CGTGACTCGAAAACCATGCT 58.852 50.000 0.00 0.00 42.86 3.79
2489 6700 1.144969 TCGTGACTCGAAAACCATGC 58.855 50.000 0.00 0.00 45.98 4.06
2515 6726 2.028190 CTGCCCCATAGCGACTCG 59.972 66.667 0.00 0.00 34.65 4.18
2516 6727 2.280457 GCTGCCCCATAGCGACTC 60.280 66.667 0.00 0.00 34.65 3.36
2521 6732 2.280457 GAGTCGCTGCCCCATAGC 60.280 66.667 0.00 0.00 37.80 2.97
2522 6733 2.028190 CGAGTCGCTGCCCCATAG 59.972 66.667 0.00 0.00 0.00 2.23
2523 6734 3.536917 CCGAGTCGCTGCCCCATA 61.537 66.667 7.12 0.00 0.00 2.74
2527 6738 3.296709 TTCTTCCGAGTCGCTGCCC 62.297 63.158 7.12 0.00 0.00 5.36
2528 6739 1.807573 CTTCTTCCGAGTCGCTGCC 60.808 63.158 7.12 0.00 0.00 4.85
2529 6740 1.073768 GACTTCTTCCGAGTCGCTGC 61.074 60.000 7.12 0.00 34.76 5.25
2537 6748 1.883732 CAGGCTCGACTTCTTCCGA 59.116 57.895 0.00 0.00 0.00 4.55
2538 6749 1.807573 GCAGGCTCGACTTCTTCCG 60.808 63.158 0.00 0.00 0.00 4.30
2540 6751 0.667792 AACGCAGGCTCGACTTCTTC 60.668 55.000 12.16 0.00 0.00 2.87
2541 6752 0.946221 CAACGCAGGCTCGACTTCTT 60.946 55.000 12.16 0.00 0.00 2.52
2542 6753 1.373497 CAACGCAGGCTCGACTTCT 60.373 57.895 12.16 0.00 0.00 2.85
2545 6756 2.356313 CACAACGCAGGCTCGACT 60.356 61.111 12.16 0.00 0.00 4.18
2546 6757 2.355837 TCACAACGCAGGCTCGAC 60.356 61.111 12.16 0.00 0.00 4.20
2547 6758 1.520600 TAGTCACAACGCAGGCTCGA 61.521 55.000 12.16 0.00 0.00 4.04
2548 6759 1.073216 CTAGTCACAACGCAGGCTCG 61.073 60.000 5.08 5.08 0.00 5.03
2549 6760 0.038159 ACTAGTCACAACGCAGGCTC 60.038 55.000 0.00 0.00 0.00 4.70
2550 6761 0.038159 GACTAGTCACAACGCAGGCT 60.038 55.000 18.20 0.00 0.00 4.58
2551 6762 0.319555 TGACTAGTCACAACGCAGGC 60.320 55.000 21.74 0.00 34.14 4.85
2561 6772 3.327626 GACTCTGAGTCGTGACTAGTCA 58.672 50.000 21.74 21.74 41.10 3.41
2574 6785 3.475944 TCGACTCGCGACTCTGAG 58.524 61.111 3.71 2.45 45.59 3.35
2582 6793 1.128724 CAGCTTAGTGTCGACTCGCG 61.129 60.000 17.92 0.00 42.69 5.87
2583 6794 0.168348 TCAGCTTAGTGTCGACTCGC 59.832 55.000 17.92 11.93 33.21 5.03
2585 6796 3.125698 GACTCAGCTTAGTGTCGACTC 57.874 52.381 17.92 13.63 33.21 3.36
2590 6801 1.540267 TGGTCGACTCAGCTTAGTGTC 59.460 52.381 16.46 0.80 0.00 3.67
2591 6802 1.617322 TGGTCGACTCAGCTTAGTGT 58.383 50.000 16.46 0.00 0.00 3.55
2593 6804 5.599999 AAATATGGTCGACTCAGCTTAGT 57.400 39.130 16.46 0.00 0.00 2.24
2595 6806 5.064707 GCAAAAATATGGTCGACTCAGCTTA 59.935 40.000 16.46 1.81 0.00 3.09
2597 6808 3.375299 GCAAAAATATGGTCGACTCAGCT 59.625 43.478 16.46 0.87 0.00 4.24
2598 6809 3.685058 GCAAAAATATGGTCGACTCAGC 58.315 45.455 16.46 6.06 0.00 4.26
2599 6810 3.616821 TCGCAAAAATATGGTCGACTCAG 59.383 43.478 16.46 0.00 0.00 3.35
2600 6811 3.369756 GTCGCAAAAATATGGTCGACTCA 59.630 43.478 16.46 12.14 41.84 3.41
2601 6812 3.924610 GTCGCAAAAATATGGTCGACTC 58.075 45.455 16.46 6.30 41.84 3.36
2603 6814 3.369756 TGAGTCGCAAAAATATGGTCGAC 59.630 43.478 7.13 7.13 44.36 4.20
2604 6815 3.591023 TGAGTCGCAAAAATATGGTCGA 58.409 40.909 0.00 0.00 0.00 4.20
2605 6816 4.536364 ATGAGTCGCAAAAATATGGTCG 57.464 40.909 0.00 0.00 0.00 4.79
2606 6817 6.480320 AGTCTATGAGTCGCAAAAATATGGTC 59.520 38.462 0.00 0.00 0.00 4.02
2607 6818 6.349300 AGTCTATGAGTCGCAAAAATATGGT 58.651 36.000 0.00 0.00 0.00 3.55
2608 6819 6.851222 AGTCTATGAGTCGCAAAAATATGG 57.149 37.500 0.00 0.00 0.00 2.74
2609 6820 8.581057 ACTAGTCTATGAGTCGCAAAAATATG 57.419 34.615 0.00 0.00 0.00 1.78
2610 6821 8.804688 GACTAGTCTATGAGTCGCAAAAATAT 57.195 34.615 15.91 0.00 33.27 1.28
2657 6868 2.209838 TCATGGATTTCGAGTCGCTC 57.790 50.000 7.92 4.43 0.00 5.03
2659 6870 2.219674 GTGATCATGGATTTCGAGTCGC 59.780 50.000 7.92 0.00 0.00 5.19
2660 6871 3.711086 AGTGATCATGGATTTCGAGTCG 58.289 45.455 6.09 6.09 0.00 4.18
2661 6872 4.683781 GCTAGTGATCATGGATTTCGAGTC 59.316 45.833 0.00 0.00 0.00 3.36
2663 6874 4.880759 AGCTAGTGATCATGGATTTCGAG 58.119 43.478 0.00 0.00 0.00 4.04
2664 6875 4.944619 AGCTAGTGATCATGGATTTCGA 57.055 40.909 0.00 0.00 0.00 3.71
2665 6876 4.813161 ACAAGCTAGTGATCATGGATTTCG 59.187 41.667 0.00 0.00 0.00 3.46
2666 6877 6.317140 TCAACAAGCTAGTGATCATGGATTTC 59.683 38.462 0.00 0.00 0.00 2.17
2667 6878 6.182627 TCAACAAGCTAGTGATCATGGATTT 58.817 36.000 0.00 0.00 0.00 2.17
2668 6879 5.748402 TCAACAAGCTAGTGATCATGGATT 58.252 37.500 0.00 0.00 0.00 3.01
2669 6880 5.363562 TCAACAAGCTAGTGATCATGGAT 57.636 39.130 0.00 0.00 0.00 3.41
2670 6881 4.824479 TCAACAAGCTAGTGATCATGGA 57.176 40.909 0.00 0.00 0.00 3.41
2672 6883 6.128090 ACACATTCAACAAGCTAGTGATCATG 60.128 38.462 0.00 0.00 0.00 3.07
2673 6884 5.942236 ACACATTCAACAAGCTAGTGATCAT 59.058 36.000 0.00 0.00 0.00 2.45
2674 6885 5.308014 ACACATTCAACAAGCTAGTGATCA 58.692 37.500 0.00 0.00 0.00 2.92
2675 6886 5.869753 ACACATTCAACAAGCTAGTGATC 57.130 39.130 0.00 0.00 0.00 2.92
2710 6921 9.436957 CCCTACAATAAACATATGTCCTCATAC 57.563 37.037 9.23 0.00 39.03 2.39
2713 6924 7.684317 TCCCTACAATAAACATATGTCCTCA 57.316 36.000 9.23 0.00 0.00 3.86
2714 6925 7.661847 CCTTCCCTACAATAAACATATGTCCTC 59.338 40.741 9.23 0.00 0.00 3.71
2715 6926 7.128883 ACCTTCCCTACAATAAACATATGTCCT 59.871 37.037 9.23 2.21 0.00 3.85
2716 6927 7.287810 ACCTTCCCTACAATAAACATATGTCC 58.712 38.462 9.23 0.00 0.00 4.02
2718 6929 8.102484 AGACCTTCCCTACAATAAACATATGT 57.898 34.615 1.41 1.41 0.00 2.29
2735 6949 5.877564 CAGAGGACATTTCTTTAGACCTTCC 59.122 44.000 0.00 0.00 0.00 3.46
2736 6950 5.352846 GCAGAGGACATTTCTTTAGACCTTC 59.647 44.000 0.00 0.00 0.00 3.46
2801 7015 8.203485 TCAGCAAGTTTACAAAAGGAAATCATT 58.797 29.630 0.00 0.00 0.00 2.57
2869 7139 9.671279 TTGCTTTTCATCATACAAGAGAAGATA 57.329 29.630 0.00 0.00 0.00 1.98
2892 7162 7.542130 CCTCTTCAAATTTACAACAGGTATTGC 59.458 37.037 0.00 0.00 32.47 3.56
2896 7166 8.934023 AATCCTCTTCAAATTTACAACAGGTA 57.066 30.769 0.00 0.00 0.00 3.08
2898 7168 8.115490 AGAATCCTCTTCAAATTTACAACAGG 57.885 34.615 0.00 0.00 0.00 4.00
2936 7206 9.921637 AAAAACATTTTCACAGTTTCAAGACTA 57.078 25.926 0.00 0.00 34.64 2.59
2938 7208 8.925700 AGAAAAACATTTTCACAGTTTCAAGAC 58.074 29.630 15.59 0.00 34.64 3.01
2968 7239 9.590451 CATAAATCAGTTGCATGGTTTTCTATT 57.410 29.630 3.98 0.00 35.23 1.73
2978 7249 7.412853 GGAGTACTTCATAAATCAGTTGCATG 58.587 38.462 0.00 0.00 0.00 4.06
2979 7250 6.543831 GGGAGTACTTCATAAATCAGTTGCAT 59.456 38.462 2.92 0.00 0.00 3.96
2982 7253 6.763610 GGAGGGAGTACTTCATAAATCAGTTG 59.236 42.308 2.92 0.00 0.00 3.16
2983 7254 6.407074 CGGAGGGAGTACTTCATAAATCAGTT 60.407 42.308 2.92 0.00 0.00 3.16
2985 7256 5.069251 ACGGAGGGAGTACTTCATAAATCAG 59.931 44.000 2.92 0.00 0.00 2.90
2992 7263 1.688627 GGGACGGAGGGAGTACTTCAT 60.689 57.143 2.92 0.00 0.00 2.57
3002 7273 2.969950 TCTTACATTATGGGACGGAGGG 59.030 50.000 0.00 0.00 0.00 4.30
3003 7274 4.040461 ACATCTTACATTATGGGACGGAGG 59.960 45.833 0.00 0.00 0.00 4.30
3005 7276 5.623956 AACATCTTACATTATGGGACGGA 57.376 39.130 0.00 0.00 0.00 4.69
3006 7277 6.693315 AAAACATCTTACATTATGGGACGG 57.307 37.500 0.00 0.00 0.00 4.79
3052 7323 6.887545 TCCGTCCCATAATGTAAGATGTTTTT 59.112 34.615 0.00 0.00 0.00 1.94
3053 7324 6.419791 TCCGTCCCATAATGTAAGATGTTTT 58.580 36.000 0.00 0.00 0.00 2.43
3054 7325 5.996644 TCCGTCCCATAATGTAAGATGTTT 58.003 37.500 0.00 0.00 0.00 2.83
3055 7326 5.454755 CCTCCGTCCCATAATGTAAGATGTT 60.455 44.000 0.00 0.00 0.00 2.71
3056 7327 4.040461 CCTCCGTCCCATAATGTAAGATGT 59.960 45.833 0.00 0.00 0.00 3.06
3057 7328 4.563580 CCCTCCGTCCCATAATGTAAGATG 60.564 50.000 0.00 0.00 0.00 2.90
3058 7329 3.583086 CCCTCCGTCCCATAATGTAAGAT 59.417 47.826 0.00 0.00 0.00 2.40
3059 7330 2.969950 CCCTCCGTCCCATAATGTAAGA 59.030 50.000 0.00 0.00 0.00 2.10
3060 7331 2.969950 TCCCTCCGTCCCATAATGTAAG 59.030 50.000 0.00 0.00 0.00 2.34
3061 7332 2.969950 CTCCCTCCGTCCCATAATGTAA 59.030 50.000 0.00 0.00 0.00 2.41
3062 7333 2.090943 ACTCCCTCCGTCCCATAATGTA 60.091 50.000 0.00 0.00 0.00 2.29
3063 7334 1.344087 ACTCCCTCCGTCCCATAATGT 60.344 52.381 0.00 0.00 0.00 2.71
3064 7335 1.424638 ACTCCCTCCGTCCCATAATG 58.575 55.000 0.00 0.00 0.00 1.90
3065 7336 2.179424 AGTACTCCCTCCGTCCCATAAT 59.821 50.000 0.00 0.00 0.00 1.28
3066 7337 1.572415 AGTACTCCCTCCGTCCCATAA 59.428 52.381 0.00 0.00 0.00 1.90
3067 7338 1.229131 AGTACTCCCTCCGTCCCATA 58.771 55.000 0.00 0.00 0.00 2.74
3068 7339 0.338814 AAGTACTCCCTCCGTCCCAT 59.661 55.000 0.00 0.00 0.00 4.00
3069 7340 0.613853 CAAGTACTCCCTCCGTCCCA 60.614 60.000 0.00 0.00 0.00 4.37
3070 7341 1.957765 GCAAGTACTCCCTCCGTCCC 61.958 65.000 0.00 0.00 0.00 4.46
3071 7342 1.255667 TGCAAGTACTCCCTCCGTCC 61.256 60.000 0.00 0.00 0.00 4.79
3072 7343 0.606604 TTGCAAGTACTCCCTCCGTC 59.393 55.000 0.00 0.00 0.00 4.79
3073 7344 0.608640 CTTGCAAGTACTCCCTCCGT 59.391 55.000 18.65 0.00 0.00 4.69
3074 7345 0.608640 ACTTGCAAGTACTCCCTCCG 59.391 55.000 30.25 1.03 37.52 4.63
3075 7346 1.623811 TGACTTGCAAGTACTCCCTCC 59.376 52.381 31.20 16.59 39.88 4.30
3076 7347 3.402628 TTGACTTGCAAGTACTCCCTC 57.597 47.619 31.20 17.30 39.88 4.30
3077 7348 3.857157 TTTGACTTGCAAGTACTCCCT 57.143 42.857 31.20 7.69 39.88 4.20
3078 7349 3.630312 TGTTTTGACTTGCAAGTACTCCC 59.370 43.478 31.20 18.70 39.88 4.30
3079 7350 4.893424 TGTTTTGACTTGCAAGTACTCC 57.107 40.909 31.20 19.07 39.88 3.85
3080 7351 7.196331 AGATTTGTTTTGACTTGCAAGTACTC 58.804 34.615 31.20 19.42 39.88 2.59
3081 7352 7.100458 AGATTTGTTTTGACTTGCAAGTACT 57.900 32.000 31.20 10.13 39.88 2.73
3082 7353 7.755582 AAGATTTGTTTTGACTTGCAAGTAC 57.244 32.000 31.20 24.33 39.88 2.73
3083 7354 7.201513 GCAAAGATTTGTTTTGACTTGCAAGTA 60.202 33.333 31.20 15.02 38.72 2.24
3084 7355 6.402442 GCAAAGATTTGTTTTGACTTGCAAGT 60.402 34.615 31.57 31.57 40.09 3.16
3085 7356 5.961263 GCAAAGATTTGTTTTGACTTGCAAG 59.039 36.000 24.84 24.84 40.24 4.01
3086 7357 5.642919 AGCAAAGATTTGTTTTGACTTGCAA 59.357 32.000 0.00 0.00 40.24 4.08
3087 7358 5.063691 CAGCAAAGATTTGTTTTGACTTGCA 59.936 36.000 7.12 0.00 40.24 4.08
3088 7359 5.495502 CAGCAAAGATTTGTTTTGACTTGC 58.504 37.500 7.12 0.00 40.24 4.01
3089 7360 5.063691 TGCAGCAAAGATTTGTTTTGACTTG 59.936 36.000 7.12 0.00 40.24 3.16
3090 7361 5.177326 TGCAGCAAAGATTTGTTTTGACTT 58.823 33.333 7.12 0.00 40.24 3.01
3091 7362 4.757594 TGCAGCAAAGATTTGTTTTGACT 58.242 34.783 7.12 0.00 40.24 3.41
3092 7363 5.467902 TTGCAGCAAAGATTTGTTTTGAC 57.532 34.783 4.99 2.52 40.24 3.18
3112 7383 6.769822 AGAAGAATAAGACATGTGGCCTATTG 59.230 38.462 1.15 0.54 0.00 1.90
3119 7390 8.954950 AACAGATAGAAGAATAAGACATGTGG 57.045 34.615 1.15 0.00 0.00 4.17
3131 7402 4.766891 CCAAAGCCCAAACAGATAGAAGAA 59.233 41.667 0.00 0.00 0.00 2.52
3209 7480 4.973168 ACATTCAAGGCTTGAGTACTTGA 58.027 39.130 27.16 13.29 46.20 3.02
3210 7481 5.471456 AGAACATTCAAGGCTTGAGTACTTG 59.529 40.000 27.16 21.15 41.38 3.16
3211 7482 5.625150 AGAACATTCAAGGCTTGAGTACTT 58.375 37.500 27.16 18.69 41.38 2.24
3212 7483 5.234466 AGAACATTCAAGGCTTGAGTACT 57.766 39.130 27.16 20.03 41.38 2.73
3213 7484 5.703130 AGAAGAACATTCAAGGCTTGAGTAC 59.297 40.000 27.16 18.47 41.38 2.73
3214 7485 5.869579 AGAAGAACATTCAAGGCTTGAGTA 58.130 37.500 27.16 16.13 41.38 2.59
3215 7486 4.723309 AGAAGAACATTCAAGGCTTGAGT 58.277 39.130 27.16 22.84 41.38 3.41
3216 7487 5.936956 ACTAGAAGAACATTCAAGGCTTGAG 59.063 40.000 27.16 19.88 41.38 3.02
3217 7488 5.702670 CACTAGAAGAACATTCAAGGCTTGA 59.297 40.000 25.38 25.38 38.04 3.02
3218 7489 5.618640 GCACTAGAAGAACATTCAAGGCTTG 60.619 44.000 21.17 21.17 0.00 4.01
3219 7490 4.457257 GCACTAGAAGAACATTCAAGGCTT 59.543 41.667 0.00 0.00 0.00 4.35
3220 7491 4.006319 GCACTAGAAGAACATTCAAGGCT 58.994 43.478 0.00 0.00 0.00 4.58
3221 7492 3.127721 GGCACTAGAAGAACATTCAAGGC 59.872 47.826 0.00 0.00 0.00 4.35
3222 7493 4.326826 TGGCACTAGAAGAACATTCAAGG 58.673 43.478 0.00 0.00 0.00 3.61
3223 7494 5.947228 TTGGCACTAGAAGAACATTCAAG 57.053 39.130 0.00 0.00 0.00 3.02
3224 7495 6.707440 TTTTGGCACTAGAAGAACATTCAA 57.293 33.333 0.00 0.00 0.00 2.69
3225 7496 6.707440 TTTTTGGCACTAGAAGAACATTCA 57.293 33.333 0.00 0.00 0.00 2.57
3246 7517 5.122711 CCGTCCCATAATGTAAGACGTTTTT 59.877 40.000 9.63 0.00 46.62 1.94
3247 7518 4.632688 CCGTCCCATAATGTAAGACGTTTT 59.367 41.667 9.63 0.00 46.62 2.43
3248 7519 4.081531 TCCGTCCCATAATGTAAGACGTTT 60.082 41.667 9.63 0.00 46.62 3.60
3249 7520 3.448301 TCCGTCCCATAATGTAAGACGTT 59.552 43.478 9.63 0.00 46.62 3.99
3250 7521 3.025978 TCCGTCCCATAATGTAAGACGT 58.974 45.455 9.63 0.00 46.62 4.34
3252 7523 3.244112 CCCTCCGTCCCATAATGTAAGAC 60.244 52.174 0.00 0.00 0.00 3.01
3253 7524 2.969950 CCCTCCGTCCCATAATGTAAGA 59.030 50.000 0.00 0.00 0.00 2.10
3254 7525 2.969950 TCCCTCCGTCCCATAATGTAAG 59.030 50.000 0.00 0.00 0.00 2.34
3255 7526 2.969950 CTCCCTCCGTCCCATAATGTAA 59.030 50.000 0.00 0.00 0.00 2.41
3256 7527 2.090943 ACTCCCTCCGTCCCATAATGTA 60.091 50.000 0.00 0.00 0.00 2.29
3257 7528 1.344087 ACTCCCTCCGTCCCATAATGT 60.344 52.381 0.00 0.00 0.00 2.71
3258 7529 1.424638 ACTCCCTCCGTCCCATAATG 58.575 55.000 0.00 0.00 0.00 1.90
3259 7530 2.179424 AGTACTCCCTCCGTCCCATAAT 59.821 50.000 0.00 0.00 0.00 1.28
3260 7531 1.572415 AGTACTCCCTCCGTCCCATAA 59.428 52.381 0.00 0.00 0.00 1.90
3261 7532 1.229131 AGTACTCCCTCCGTCCCATA 58.771 55.000 0.00 0.00 0.00 2.74
3262 7533 0.338814 AAGTACTCCCTCCGTCCCAT 59.661 55.000 0.00 0.00 0.00 4.00
3263 7534 0.613853 CAAGTACTCCCTCCGTCCCA 60.614 60.000 0.00 0.00 0.00 4.37
3264 7535 1.957765 GCAAGTACTCCCTCCGTCCC 61.958 65.000 0.00 0.00 0.00 4.46
3265 7536 1.255667 TGCAAGTACTCCCTCCGTCC 61.256 60.000 0.00 0.00 0.00 4.79
3266 7537 0.606604 TTGCAAGTACTCCCTCCGTC 59.393 55.000 0.00 0.00 0.00 4.79
3267 7538 0.608640 CTTGCAAGTACTCCCTCCGT 59.391 55.000 18.65 0.00 0.00 4.69
3268 7539 0.608640 ACTTGCAAGTACTCCCTCCG 59.391 55.000 30.25 1.03 37.52 4.63
3269 7540 1.623811 TGACTTGCAAGTACTCCCTCC 59.376 52.381 31.20 16.59 39.88 4.30
3270 7541 3.402628 TTGACTTGCAAGTACTCCCTC 57.597 47.619 31.20 17.30 39.88 4.30
3271 7542 3.857157 TTTGACTTGCAAGTACTCCCT 57.143 42.857 31.20 7.69 39.88 4.20
3272 7543 3.630312 TGTTTTGACTTGCAAGTACTCCC 59.370 43.478 31.20 18.70 39.88 4.30
3273 7544 4.893424 TGTTTTGACTTGCAAGTACTCC 57.107 40.909 31.20 19.07 39.88 3.85
3274 7545 7.196331 AGATTTGTTTTGACTTGCAAGTACTC 58.804 34.615 31.20 19.42 39.88 2.59
3275 7546 7.100458 AGATTTGTTTTGACTTGCAAGTACT 57.900 32.000 31.20 10.13 39.88 2.73
3276 7547 7.755582 AAGATTTGTTTTGACTTGCAAGTAC 57.244 32.000 31.20 24.33 39.88 2.73
3277 7548 7.201513 GCAAAGATTTGTTTTGACTTGCAAGTA 60.202 33.333 31.20 15.02 38.72 2.24
3278 7549 6.402442 GCAAAGATTTGTTTTGACTTGCAAGT 60.402 34.615 31.57 31.57 40.09 3.16
3279 7550 5.961263 GCAAAGATTTGTTTTGACTTGCAAG 59.039 36.000 24.84 24.84 40.24 4.01
3280 7551 5.642919 AGCAAAGATTTGTTTTGACTTGCAA 59.357 32.000 0.00 0.00 40.24 4.08
3281 7552 5.063691 CAGCAAAGATTTGTTTTGACTTGCA 59.936 36.000 7.12 0.00 40.24 4.08
3282 7553 5.063817 ACAGCAAAGATTTGTTTTGACTTGC 59.936 36.000 7.12 0.00 40.24 4.01
3283 7554 6.651755 ACAGCAAAGATTTGTTTTGACTTG 57.348 33.333 7.12 0.64 40.24 3.16
3284 7555 8.947055 ATTACAGCAAAGATTTGTTTTGACTT 57.053 26.923 7.12 0.00 40.24 3.01
3285 7556 9.683069 CTATTACAGCAAAGATTTGTTTTGACT 57.317 29.630 7.12 0.00 40.24 3.41
3286 7557 8.915654 CCTATTACAGCAAAGATTTGTTTTGAC 58.084 33.333 7.12 0.00 40.24 3.18
3287 7558 7.598493 GCCTATTACAGCAAAGATTTGTTTTGA 59.402 33.333 7.12 0.00 40.24 2.69
3288 7559 7.148590 GGCCTATTACAGCAAAGATTTGTTTTG 60.149 37.037 0.00 6.23 40.24 2.44
3289 7560 6.873605 GGCCTATTACAGCAAAGATTTGTTTT 59.126 34.615 0.00 0.00 40.24 2.43
3290 7561 6.014669 TGGCCTATTACAGCAAAGATTTGTTT 60.015 34.615 3.32 0.00 40.24 2.83
3291 7562 5.480073 TGGCCTATTACAGCAAAGATTTGTT 59.520 36.000 3.32 0.00 40.24 2.83
3292 7563 5.016173 TGGCCTATTACAGCAAAGATTTGT 58.984 37.500 3.32 0.00 40.24 2.83
3293 7564 5.105797 TGTGGCCTATTACAGCAAAGATTTG 60.106 40.000 3.32 0.84 41.03 2.32
3294 7565 5.016173 TGTGGCCTATTACAGCAAAGATTT 58.984 37.500 3.32 0.00 0.00 2.17
3295 7566 4.599041 TGTGGCCTATTACAGCAAAGATT 58.401 39.130 3.32 0.00 0.00 2.40
3296 7567 4.235079 TGTGGCCTATTACAGCAAAGAT 57.765 40.909 3.32 0.00 0.00 2.40
3297 7568 3.712016 TGTGGCCTATTACAGCAAAGA 57.288 42.857 3.32 0.00 0.00 2.52
3298 7569 3.696051 ACATGTGGCCTATTACAGCAAAG 59.304 43.478 3.32 0.00 0.00 2.77
3299 7570 3.694072 GACATGTGGCCTATTACAGCAAA 59.306 43.478 1.15 0.00 0.00 3.68
3300 7571 3.054434 AGACATGTGGCCTATTACAGCAA 60.054 43.478 1.15 0.00 0.00 3.91
3301 7572 2.505407 AGACATGTGGCCTATTACAGCA 59.495 45.455 1.15 0.00 0.00 4.41
3302 7573 3.199880 AGACATGTGGCCTATTACAGC 57.800 47.619 1.15 0.00 0.00 4.40
3303 7574 7.220030 AGAATAAGACATGTGGCCTATTACAG 58.780 38.462 1.15 0.00 0.00 2.74
3304 7575 7.136822 AGAATAAGACATGTGGCCTATTACA 57.863 36.000 1.15 0.00 0.00 2.41
3305 7576 7.934120 AGAAGAATAAGACATGTGGCCTATTAC 59.066 37.037 1.15 0.00 0.00 1.89
3306 7577 8.034313 AGAAGAATAAGACATGTGGCCTATTA 57.966 34.615 1.15 0.00 0.00 0.98
3307 7578 6.904626 AGAAGAATAAGACATGTGGCCTATT 58.095 36.000 1.15 0.61 0.00 1.73
3308 7579 6.506538 AGAAGAATAAGACATGTGGCCTAT 57.493 37.500 1.15 0.00 0.00 2.57
3309 7580 5.957771 AGAAGAATAAGACATGTGGCCTA 57.042 39.130 1.15 0.00 0.00 3.93
3310 7581 4.851639 AGAAGAATAAGACATGTGGCCT 57.148 40.909 1.15 0.00 0.00 5.19
3311 7582 6.426328 CAGATAGAAGAATAAGACATGTGGCC 59.574 42.308 1.15 0.00 0.00 5.36
3312 7583 6.989169 ACAGATAGAAGAATAAGACATGTGGC 59.011 38.462 1.15 0.00 0.00 5.01
3313 7584 8.954950 AACAGATAGAAGAATAAGACATGTGG 57.045 34.615 1.15 0.00 0.00 4.17
3315 7586 9.388506 CCAAACAGATAGAAGAATAAGACATGT 57.611 33.333 0.00 0.00 0.00 3.21
3316 7587 8.834465 CCCAAACAGATAGAAGAATAAGACATG 58.166 37.037 0.00 0.00 0.00 3.21
3317 7588 7.500559 GCCCAAACAGATAGAAGAATAAGACAT 59.499 37.037 0.00 0.00 0.00 3.06
3318 7589 6.823689 GCCCAAACAGATAGAAGAATAAGACA 59.176 38.462 0.00 0.00 0.00 3.41
3319 7590 7.051000 AGCCCAAACAGATAGAAGAATAAGAC 58.949 38.462 0.00 0.00 0.00 3.01
3320 7591 7.200434 AGCCCAAACAGATAGAAGAATAAGA 57.800 36.000 0.00 0.00 0.00 2.10
3321 7592 7.872113 AAGCCCAAACAGATAGAAGAATAAG 57.128 36.000 0.00 0.00 0.00 1.73
3322 7593 8.522830 CAAAAGCCCAAACAGATAGAAGAATAA 58.477 33.333 0.00 0.00 0.00 1.40
3323 7594 7.122650 CCAAAAGCCCAAACAGATAGAAGAATA 59.877 37.037 0.00 0.00 0.00 1.75
3324 7595 6.071165 CCAAAAGCCCAAACAGATAGAAGAAT 60.071 38.462 0.00 0.00 0.00 2.40
3325 7596 5.243730 CCAAAAGCCCAAACAGATAGAAGAA 59.756 40.000 0.00 0.00 0.00 2.52
3326 7597 4.766891 CCAAAAGCCCAAACAGATAGAAGA 59.233 41.667 0.00 0.00 0.00 2.87
3327 7598 4.524328 ACCAAAAGCCCAAACAGATAGAAG 59.476 41.667 0.00 0.00 0.00 2.85
3328 7599 4.479158 ACCAAAAGCCCAAACAGATAGAA 58.521 39.130 0.00 0.00 0.00 2.10
3329 7600 4.112634 ACCAAAAGCCCAAACAGATAGA 57.887 40.909 0.00 0.00 0.00 1.98
3330 7601 5.010282 AGTACCAAAAGCCCAAACAGATAG 58.990 41.667 0.00 0.00 0.00 2.08
3331 7602 4.764823 CAGTACCAAAAGCCCAAACAGATA 59.235 41.667 0.00 0.00 0.00 1.98
3332 7603 3.573967 CAGTACCAAAAGCCCAAACAGAT 59.426 43.478 0.00 0.00 0.00 2.90
3333 7604 2.955660 CAGTACCAAAAGCCCAAACAGA 59.044 45.455 0.00 0.00 0.00 3.41
3334 7605 2.955660 TCAGTACCAAAAGCCCAAACAG 59.044 45.455 0.00 0.00 0.00 3.16
3335 7606 3.019799 TCAGTACCAAAAGCCCAAACA 57.980 42.857 0.00 0.00 0.00 2.83
3336 7607 3.572255 TGATCAGTACCAAAAGCCCAAAC 59.428 43.478 0.00 0.00 0.00 2.93
3337 7608 3.838565 TGATCAGTACCAAAAGCCCAAA 58.161 40.909 0.00 0.00 0.00 3.28
3338 7609 3.517296 TGATCAGTACCAAAAGCCCAA 57.483 42.857 0.00 0.00 0.00 4.12
3339 7610 3.181434 ACTTGATCAGTACCAAAAGCCCA 60.181 43.478 0.00 0.00 31.97 5.36
3340 7611 3.421844 ACTTGATCAGTACCAAAAGCCC 58.578 45.455 0.00 0.00 31.97 5.19
3341 7612 3.440522 GGACTTGATCAGTACCAAAAGCC 59.559 47.826 0.00 0.00 35.01 4.35
3342 7613 4.072131 TGGACTTGATCAGTACCAAAAGC 58.928 43.478 12.26 0.00 34.98 3.51
3343 7614 5.124457 CCATGGACTTGATCAGTACCAAAAG 59.876 44.000 5.56 11.34 34.98 2.27
3344 7615 5.009631 CCATGGACTTGATCAGTACCAAAA 58.990 41.667 5.56 0.23 34.98 2.44
3345 7616 4.288366 TCCATGGACTTGATCAGTACCAAA 59.712 41.667 11.44 6.88 34.98 3.28
3346 7617 3.843619 TCCATGGACTTGATCAGTACCAA 59.156 43.478 11.44 3.22 34.98 3.67
3347 7618 3.449918 TCCATGGACTTGATCAGTACCA 58.550 45.455 11.44 15.50 34.98 3.25
3348 7619 4.487714 TTCCATGGACTTGATCAGTACC 57.512 45.455 15.91 1.49 34.98 3.34
3349 7620 5.431765 ACATTCCATGGACTTGATCAGTAC 58.568 41.667 24.20 0.00 35.01 2.73
3350 7621 5.698741 ACATTCCATGGACTTGATCAGTA 57.301 39.130 24.20 4.61 35.01 2.74
3351 7622 4.581309 ACATTCCATGGACTTGATCAGT 57.419 40.909 24.20 7.56 39.07 3.41
3352 7623 5.909621 AAACATTCCATGGACTTGATCAG 57.090 39.130 24.20 7.00 33.60 2.90
3353 7624 5.353956 CGTAAACATTCCATGGACTTGATCA 59.646 40.000 24.20 6.68 33.60 2.92
3354 7625 5.354234 ACGTAAACATTCCATGGACTTGATC 59.646 40.000 24.20 9.42 33.60 2.92
3355 7626 5.253330 ACGTAAACATTCCATGGACTTGAT 58.747 37.500 24.20 13.73 33.60 2.57
3356 7627 4.647611 ACGTAAACATTCCATGGACTTGA 58.352 39.130 24.20 8.42 33.60 3.02
3357 7628 6.489127 TTACGTAAACATTCCATGGACTTG 57.511 37.500 15.91 17.41 33.60 3.16
3358 7629 7.696992 ATTTACGTAAACATTCCATGGACTT 57.303 32.000 22.30 8.27 33.60 3.01
3359 7630 8.044908 AGTATTTACGTAAACATTCCATGGACT 58.955 33.333 22.30 6.30 33.60 3.85
3360 7631 8.205131 AGTATTTACGTAAACATTCCATGGAC 57.795 34.615 22.30 0.00 33.60 4.02
3361 7632 8.795842 AAGTATTTACGTAAACATTCCATGGA 57.204 30.769 22.30 11.44 33.60 3.41
3362 7633 9.849166 AAAAGTATTTACGTAAACATTCCATGG 57.151 29.630 22.30 4.97 37.28 3.66
3366 7637 9.550811 CCAGAAAAGTATTTACGTAAACATTCC 57.449 33.333 22.30 12.07 37.28 3.01
3383 7654 9.574516 ACTTGAAATACAACTATCCAGAAAAGT 57.425 29.630 0.00 0.00 34.56 2.66
3391 7662 9.937175 GCTTGAATACTTGAAATACAACTATCC 57.063 33.333 0.00 0.00 34.56 2.59
3392 7663 9.937175 GGCTTGAATACTTGAAATACAACTATC 57.063 33.333 0.00 0.00 34.56 2.08
3393 7664 9.686683 AGGCTTGAATACTTGAAATACAACTAT 57.313 29.630 0.00 0.00 34.56 2.12
3394 7665 9.515226 AAGGCTTGAATACTTGAAATACAACTA 57.485 29.630 0.00 0.00 34.56 2.24
3395 7666 8.299570 CAAGGCTTGAATACTTGAAATACAACT 58.700 33.333 22.64 0.00 43.13 3.16
3396 7667 8.296713 TCAAGGCTTGAATACTTGAAATACAAC 58.703 33.333 26.78 0.00 45.26 3.32
3397 7668 8.402798 TCAAGGCTTGAATACTTGAAATACAA 57.597 30.769 26.78 0.00 45.26 2.41
3398 7669 7.994425 TCAAGGCTTGAATACTTGAAATACA 57.006 32.000 26.78 0.00 45.26 2.29
3439 7710 5.376854 ACAGTTTAAGTGGACAATGATGC 57.623 39.130 4.72 0.00 0.00 3.91
3485 7756 5.954153 ATTTTGGGTGCATGGAATCATTA 57.046 34.783 0.00 0.00 0.00 1.90
3493 7764 1.901159 TCTGGAATTTTGGGTGCATGG 59.099 47.619 0.00 0.00 0.00 3.66
3636 7907 7.998580 ACATAACTAACTTTCGGGTTTTCAAA 58.001 30.769 0.00 0.00 0.00 2.69
3647 7926 8.770828 TGCAGTACAAGAACATAACTAACTTTC 58.229 33.333 0.00 0.00 0.00 2.62
3786 8095 2.694628 AGGATGCAGAAAAACACAAGCA 59.305 40.909 0.00 0.00 36.34 3.91
3787 8096 3.375782 AGGATGCAGAAAAACACAAGC 57.624 42.857 0.00 0.00 0.00 4.01
3805 8120 3.643792 TGGGAATACAAAAACCCACAAGG 59.356 43.478 0.00 0.00 46.04 3.61
3828 8143 4.330074 CCGCTTGAAACACTGACTATTAGG 59.670 45.833 0.00 0.00 0.00 2.69
3849 8164 2.664916 CAACTTGATTTGACTTGCCCG 58.335 47.619 0.00 0.00 0.00 6.13
3911 8240 4.079787 AGGCCTGGCTAATTGTCAAATAGA 60.080 41.667 19.68 0.00 0.00 1.98
3974 8410 5.646577 ACCAGACACACTAAGTATGACTC 57.353 43.478 0.00 0.00 30.09 3.36
3985 8421 0.179018 GGGCTCAAACCAGACACACT 60.179 55.000 0.00 0.00 0.00 3.55
4047 8483 3.291584 TGCCAACAGTGTCCAAAACATA 58.708 40.909 0.00 0.00 40.80 2.29
4096 8532 6.549364 TGTCTGACAAAAATTTGGTATGACCT 59.451 34.615 8.27 0.00 42.34 3.85
4103 8547 5.867903 TGGATGTCTGACAAAAATTTGGT 57.132 34.783 15.31 0.00 42.34 3.67
4119 8563 4.961438 ATTTTGGTTCTTGCTTGGATGT 57.039 36.364 0.00 0.00 0.00 3.06
4153 8597 6.015519 CCAAATCAACCCTACTGATTGTTTCA 60.016 38.462 0.00 0.00 41.56 2.69
4154 8598 6.389906 CCAAATCAACCCTACTGATTGTTTC 58.610 40.000 0.00 0.00 41.56 2.78
4164 8608 1.544724 TGCAGCCAAATCAACCCTAC 58.455 50.000 0.00 0.00 0.00 3.18
4169 8613 4.142730 TGTTTTGTTTGCAGCCAAATCAAC 60.143 37.500 15.73 11.19 42.44 3.18
4179 8623 7.029563 GGACTATAGGAATGTTTTGTTTGCAG 58.970 38.462 4.43 0.00 0.00 4.41
4190 8634 6.183360 GGTCTTAACACGGACTATAGGAATGT 60.183 42.308 4.43 0.40 33.46 2.71
4205 8649 9.542462 TGTATGCAATATAAGAGGTCTTAACAC 57.458 33.333 3.60 0.00 41.27 3.32
4220 8664 7.578310 AGCAATTCACTTCTGTATGCAATAT 57.422 32.000 0.00 0.00 0.00 1.28
4235 8679 7.420800 CCCAGAGATTTATGTAAGCAATTCAC 58.579 38.462 0.00 0.00 0.00 3.18
4245 8689 6.012337 TGAAATGCCCCAGAGATTTATGTA 57.988 37.500 0.00 0.00 0.00 2.29
4666 9460 4.386951 TGGCCGTCACCATCCACG 62.387 66.667 0.00 0.00 33.75 4.94
4669 9463 1.227674 GATCTGGCCGTCACCATCC 60.228 63.158 0.00 0.00 39.54 3.51
4763 9557 7.475137 AACATCAAGAGAGAACTAGCTTAGT 57.525 36.000 0.00 0.00 41.73 2.24
4764 9558 7.647715 GCTAACATCAAGAGAGAACTAGCTTAG 59.352 40.741 0.00 0.00 0.00 2.18
4765 9559 7.122799 TGCTAACATCAAGAGAGAACTAGCTTA 59.877 37.037 0.00 0.00 0.00 3.09
4766 9560 6.071108 TGCTAACATCAAGAGAGAACTAGCTT 60.071 38.462 0.00 0.00 0.00 3.74
4767 9561 5.420421 TGCTAACATCAAGAGAGAACTAGCT 59.580 40.000 0.00 0.00 0.00 3.32
4768 9562 5.655488 TGCTAACATCAAGAGAGAACTAGC 58.345 41.667 0.00 0.00 0.00 3.42
4769 9563 5.748152 GCTGCTAACATCAAGAGAGAACTAG 59.252 44.000 0.00 0.00 0.00 2.57
4770 9564 5.420421 AGCTGCTAACATCAAGAGAGAACTA 59.580 40.000 0.00 0.00 0.00 2.24
4771 9565 4.222588 AGCTGCTAACATCAAGAGAGAACT 59.777 41.667 0.00 0.00 0.00 3.01
4772 9566 4.502962 AGCTGCTAACATCAAGAGAGAAC 58.497 43.478 0.00 0.00 0.00 3.01
4773 9567 4.815533 AGCTGCTAACATCAAGAGAGAA 57.184 40.909 0.00 0.00 0.00 2.87
4774 9568 4.952957 ACTAGCTGCTAACATCAAGAGAGA 59.047 41.667 11.02 0.00 0.00 3.10
4775 9569 5.261209 ACTAGCTGCTAACATCAAGAGAG 57.739 43.478 11.02 0.00 0.00 3.20
4776 9570 5.667539 AACTAGCTGCTAACATCAAGAGA 57.332 39.130 11.02 0.00 0.00 3.10
4777 9571 7.462109 CTAAACTAGCTGCTAACATCAAGAG 57.538 40.000 11.02 0.00 0.00 2.85
4822 9616 4.456911 TCACTGGACTTAACAGTAGTACCG 59.543 45.833 0.00 0.00 46.76 4.02
4862 9656 1.661463 ACATCCCTGAGAAGGAAGCA 58.339 50.000 0.00 0.00 36.85 3.91
4863 9657 2.026822 TCAACATCCCTGAGAAGGAAGC 60.027 50.000 0.00 0.00 36.85 3.86
4939 9737 7.764443 AGCAAATTCATGATCTCAATTTGGAAG 59.236 33.333 22.29 6.34 43.31 3.46
4975 9773 6.433716 TCCATGCAACTTGATACAATGAAAGA 59.566 34.615 0.00 0.00 0.00 2.52
4977 9775 6.587206 TCCATGCAACTTGATACAATGAAA 57.413 33.333 0.00 0.00 0.00 2.69
4983 9781 4.637091 CAGACATCCATGCAACTTGATACA 59.363 41.667 0.00 0.00 0.00 2.29
5020 9841 3.186409 CCAAGGAGTTGATAACACACACG 59.814 47.826 0.00 0.00 35.46 4.49
5037 9858 1.315257 CGAAATCCTGCACCCCAAGG 61.315 60.000 0.00 0.00 40.04 3.61
5073 9894 9.136323 TGAGATGTACTACATTGTCTACATCAT 57.864 33.333 28.46 20.60 43.48 2.45
5151 10389 0.094558 TCGACGAAATGCGCAATCAC 59.905 50.000 17.11 11.68 46.04 3.06
5540 14258 5.482163 TTTGCTGGGGAGAAAAATAAAGG 57.518 39.130 0.00 0.00 0.00 3.11
5578 14298 9.150348 GTTTGTCCATTATTTGTTTATCCAAGG 57.850 33.333 0.00 0.00 0.00 3.61
5679 14403 9.025041 GGATTCCCTCTTAGAAAAGAAATTTGA 57.975 33.333 0.00 0.00 41.19 2.69
5743 14467 6.202379 GGAATGGAACTTATAACTAGGTTCGC 59.798 42.308 8.43 4.32 42.12 4.70
5762 14486 8.482852 AAGATGGAATAAATTACAGGGAATGG 57.517 34.615 0.00 0.00 33.38 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.