AutoCloner

Multiple sequence alignment - TraesCS3B01G214100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS3B01G214100	chr3B	100.000	6320	0	0	1	6320	254038317	254031998	0.000000e+00	11671.0
1	TraesCS3B01G214100	chr3B	95.378	238	6	4	3286	3522	750436550	750436317	2.150000e-99	374.0
2	TraesCS3B01G214100	chr3B	78.698	338	60	9	291	622	42725510	42725179	1.380000e-51	215.0
3	TraesCS3B01G214100	chr3B	90.446	157	13	1	5770	5924	716304999	716304843	8.310000e-49	206.0
4	TraesCS3B01G214100	chr3B	77.104	297	44	10	288	577	781561311	781561590	3.950000e-32	150.0
5	TraesCS3B01G214100	chr3D	97.363	2465	49	7	832	3287	175015492	175013035	0.000000e+00	4178.0
6	TraesCS3B01G214100	chr3D	97.423	1358	18	8	4425	5780	175012560	175011218	0.000000e+00	2298.0
7	TraesCS3B01G214100	chr3D	95.400	500	10	5	3516	4010	175013039	175012548	0.000000e+00	784.0
8	TraesCS3B01G214100	chr3D	86.207	638	76	10	4	636	583534855	583534225	0.000000e+00	680.0
9	TraesCS3B01G214100	chr3D	88.933	253	28	0	1	253	477640551	477640803	4.760000e-81	313.0
10	TraesCS3B01G214100	chr3D	95.031	161	8	0	5964	6124	99855218	99855058	2.920000e-63	254.0
11	TraesCS3B01G214100	chr3D	93.333	165	9	2	5964	6128	188352715	188352877	6.330000e-60	243.0
12	TraesCS3B01G214100	chr3D	93.168	161	11	0	5964	6124	300924818	300924658	2.950000e-58	237.0
13	TraesCS3B01G214100	chr3D	88.372	172	20	0	6120	6291	484678163	484678334	2.310000e-49	207.0
14	TraesCS3B01G214100	chr3D	87.283	173	21	1	6120	6291	484686244	484686416	5.000000e-46	196.0
15	TraesCS3B01G214100	chr3D	80.687	233	30	13	2543	2770	602549303	602549525	3.920000e-37	167.0
16	TraesCS3B01G214100	chr3D	93.407	91	6	0	703	793	175015588	175015498	1.110000e-27	135.0
17	TraesCS3B01G214100	chr3D	84.173	139	18	4	2586	2721	526209033	526209170	1.430000e-26	132.0
18	TraesCS3B01G214100	chr3D	90.909	88	3	3	629	711	175036412	175036325	5.180000e-21	113.0
19	TraesCS3B01G214100	chr3D	85.714	77	9	2	2543	2618	3003069	3002994	5.250000e-11	80.5
20	TraesCS3B01G214100	chr3A	95.193	2663	85	16	658	3292	215207211	215204564	0.000000e+00	4169.0
21	TraesCS3B01G214100	chr3A	96.083	817	30	2	4964	5780	215203551	215202737	0.000000e+00	1330.0
22	TraesCS3B01G214100	chr3A	89.689	514	35	10	3507	4014	215204566	215204065	1.920000e-179	640.0
23	TraesCS3B01G214100	chr3A	93.720	414	14	9	4423	4833	215204084	215203680	1.510000e-170	610.0
24	TraesCS3B01G214100	chr3A	90.119	253	25	0	4	256	501568242	501567990	4.720000e-86	329.0
25	TraesCS3B01G214100	chr3A	93.168	161	9	2	5964	6124	672542363	672542521	1.060000e-57	235.0
26	TraesCS3B01G214100	chr3A	90.625	160	15	0	5777	5936	647241529	647241688	4.960000e-51	213.0
27	TraesCS3B01G214100	chr3A	95.614	114	5	0	4861	4974	215203683	215203570	3.890000e-42	183.0
28	TraesCS3B01G214100	chr3A	78.545	275	35	14	2552	2808	698686844	698687112	6.560000e-35	159.0
29	TraesCS3B01G214100	chr3A	81.921	177	21	11	2552	2721	660444425	660444597	8.540000e-29	139.0
30	TraesCS3B01G214100	chr1B	95.067	446	22	0	3990	4435	313489960	313489515	0.000000e+00	702.0
31	TraesCS3B01G214100	chr1B	96.875	224	7	0	3286	3509	123344059	123343836	5.980000e-100	375.0
32	TraesCS3B01G214100	chr7A	95.045	444	21	1	3995	4437	586197582	586198025	0.000000e+00	697.0
33	TraesCS3B01G214100	chr7A	95.011	441	22	0	3997	4437	586200099	586200539	0.000000e+00	693.0
34	TraesCS3B01G214100	chr7A	81.439	264	32	13	2552	2811	625379042	625379292	3.860000e-47	200.0
35	TraesCS3B01G214100	chr7A	77.075	253	41	12	2565	2814	642379123	642378885	5.140000e-26	130.0
36	TraesCS3B01G214100	chr2B	95.034	443	20	1	3997	4437	737277736	737277294	0.000000e+00	695.0
37	TraesCS3B01G214100	chr2B	84.053	533	60	13	5	536	200034937	200034429	2.050000e-134	490.0
38	TraesCS3B01G214100	chr2B	97.297	222	6	0	3287	3508	486984580	486984801	1.660000e-100	377.0
39	TraesCS3B01G214100	chr4B	95.011	441	22	0	3997	4437	283253626	283253186	0.000000e+00	693.0
40	TraesCS3B01G214100	chr4B	94.785	441	23	0	3997	4437	220970625	220970185	0.000000e+00	688.0
41	TraesCS3B01G214100	chr4B	85.714	182	23	3	6125	6305	283812764	283812585	8.360000e-44	189.0
42	TraesCS3B01G214100	chr4B	84.656	189	25	4	6120	6306	283804583	283804397	1.080000e-42	185.0
43	TraesCS3B01G214100	chr4B	84.375	96	13	2	2552	2646	462223564	462223470	6.750000e-15	93.5
44	TraesCS3B01G214100	chr5B	95.205	438	20	1	3993	4430	656783280	656783716	0.000000e+00	691.0
45	TraesCS3B01G214100	chr5B	89.558	249	24	2	1	249	467131327	467131573	1.320000e-81	315.0
46	TraesCS3B01G214100	chr5B	77.559	254	44	11	2551	2802	24315894	24316136	2.380000e-29	141.0
47	TraesCS3B01G214100	chr5B	77.953	254	36	16	2535	2783	599794176	599794414	2.380000e-29	141.0
48	TraesCS3B01G214100	chr5B	77.165	254	45	11	2551	2802	24333154	24333396	1.110000e-27	135.0
49	TraesCS3B01G214100	chr5B	77.165	254	45	11	2551	2802	24358867	24359109	1.110000e-27	135.0
50	TraesCS3B01G214100	chr5B	95.000	40	2	0	2722	2761	31114771	31114732	5.290000e-06	63.9
51	TraesCS3B01G214100	chr1A	94.977	438	22	0	3997	4434	465273986	465273549	0.000000e+00	688.0
52	TraesCS3B01G214100	chr1A	79.739	153	18	10	2589	2728	569831609	569831457	1.450000e-16	99.0
53	TraesCS3B01G214100	chr4A	94.260	453	19	6	3993	4441	35775157	35774708	0.000000e+00	686.0
54	TraesCS3B01G214100	chr4A	89.375	160	17	0	5777	5936	30312631	30312790	1.070000e-47	202.0
55	TraesCS3B01G214100	chr4A	79.739	153	18	10	2589	2728	623836453	623836301	1.450000e-16	99.0
56	TraesCS3B01G214100	chr2A	86.509	593	71	9	41	630	774624838	774624252	1.490000e-180	643.0
57	TraesCS3B01G214100	chr2A	95.690	232	9	1	3284	3514	141901252	141901021	7.740000e-99	372.0
58	TraesCS3B01G214100	chr2A	77.966	236	26	8	2586	2805	657530220	657530445	2.390000e-24	124.0
59	TraesCS3B01G214100	chr7D	96.916	227	5	2	3284	3509	227048832	227049057	4.620000e-101	379.0
60	TraesCS3B01G214100	chr7D	87.549	257	31	1	1	257	564200008	564200263	4.790000e-76	296.0
61	TraesCS3B01G214100	chr7D	93.373	166	11	0	5771	5936	616896817	616896652	4.890000e-61	246.0
62	TraesCS3B01G214100	chr7D	92.547	161	12	0	5964	6124	61751058	61750898	1.370000e-56	231.0
63	TraesCS3B01G214100	chr7D	94.326	141	8	0	5779	5919	513327776	513327636	3.840000e-52	217.0
64	TraesCS3B01G214100	chr7D	92.466	146	11	0	5774	5919	400188251	400188106	6.420000e-50	209.0
65	TraesCS3B01G214100	chr7D	92.199	141	11	0	5779	5919	35188329	35188189	3.860000e-47	200.0
66	TraesCS3B01G214100	chr7D	85.876	177	22	3	6124	6298	523204055	523204230	1.080000e-42	185.0
67	TraesCS3B01G214100	chr7D	77.083	336	60	12	291	612	187114322	187113990	1.810000e-40	178.0
68	TraesCS3B01G214100	chr7D	80.220	182	20	12	2633	2811	543391331	543391499	8.600000e-24	122.0
69	TraesCS3B01G214100	chr7B	97.727	220	5	0	3290	3509	301591102	301590883	4.620000e-101	379.0
70	TraesCS3B01G214100	chr7B	89.516	248	26	0	5	252	687068439	687068192	1.320000e-81	315.0
71	TraesCS3B01G214100	chr7B	89.697	165	16	1	6125	6289	120196661	120196498	6.420000e-50	209.0
72	TraesCS3B01G214100	chr7B	81.369	263	34	14	2552	2811	586334396	586334646	3.860000e-47	200.0
73	TraesCS3B01G214100	chr7B	87.791	172	18	3	6120	6289	130368208	130368038	1.390000e-46	198.0
74	TraesCS3B01G214100	chr6D	97.297	222	6	0	3287	3508	35627103	35626882	1.660000e-100	377.0
75	TraesCS3B01G214100	chr6D	94.915	236	10	2	3274	3508	469559034	469559268	1.000000e-97	368.0
76	TraesCS3B01G214100	chr6D	88.538	253	28	1	4	256	408146714	408146463	7.960000e-79	305.0
77	TraesCS3B01G214100	chr6D	87.160	257	32	1	1	256	34429361	34429617	2.230000e-74	291.0
78	TraesCS3B01G214100	chr6D	86.957	253	32	1	4	256	341118586	341118335	3.730000e-72	283.0
79	TraesCS3B01G214100	chr6D	85.938	256	35	1	1	256	428446746	428447000	8.070000e-69	272.0
80	TraesCS3B01G214100	chr6D	86.166	253	33	2	6	257	454062419	454062670	8.070000e-69	272.0
81	TraesCS3B01G214100	chr6D	92.547	161	12	0	5964	6124	413041600	413041440	1.370000e-56	231.0
82	TraesCS3B01G214100	chr6D	92.500	160	12	0	5965	6124	421585934	421586093	4.930000e-56	230.0
83	TraesCS3B01G214100	chr6D	91.975	162	10	3	5964	6124	222661786	222661945	2.290000e-54	224.0
84	TraesCS3B01G214100	chr6D	95.683	139	6	0	5986	6124	469443625	469443763	2.290000e-54	224.0
85	TraesCS3B01G214100	chr6D	89.205	176	18	1	6123	6298	211191175	211191349	1.070000e-52	219.0
86	TraesCS3B01G214100	chr6D	90.683	161	15	0	5964	6124	84623906	84624066	1.380000e-51	215.0
87	TraesCS3B01G214100	chr6D	90.741	162	13	1	5964	6123	134681394	134681233	1.380000e-51	215.0
88	TraesCS3B01G214100	chr6D	90.683	161	14	1	5964	6124	464066823	464066664	4.960000e-51	213.0
89	TraesCS3B01G214100	chr6D	87.356	174	21	1	6125	6298	211182576	211182748	1.390000e-46	198.0
90	TraesCS3B01G214100	chr6D	88.820	161	18	0	5964	6124	387108549	387108389	1.390000e-46	198.0
91	TraesCS3B01G214100	chr6D	91.489	141	12	0	5779	5919	414471533	414471393	1.800000e-45	195.0
92	TraesCS3B01G214100	chr6D	89.172	157	14	2	5770	5924	387108810	387108655	6.470000e-45	193.0
93	TraesCS3B01G214100	chr6D	87.273	165	17	3	6123	6285	262653154	262653316	1.080000e-42	185.0
94	TraesCS3B01G214100	chr6D	88.889	144	13	2	5777	5919	413041854	413041713	2.340000e-39	174.0
95	TraesCS3B01G214100	chr6D	88.112	143	15	1	5777	5919	100901582	100901722	1.090000e-37	169.0
96	TraesCS3B01G214100	chr6D	85.207	169	19	4	6120	6284	197663480	197663646	1.090000e-37	169.0
97	TraesCS3B01G214100	chr6D	84.615	169	21	4	6120	6285	262661096	262661262	5.070000e-36	163.0
98	TraesCS3B01G214100	chr6D	83.240	179	26	3	6124	6299	380644279	380644102	1.820000e-35	161.0
99	TraesCS3B01G214100	chr6D	86.538	156	8	4	5777	5919	84623638	84623793	6.560000e-35	159.0
100	TraesCS3B01G214100	chr6D	77.820	266	42	12	2552	2814	444708489	444708238	1.420000e-31	148.0
101	TraesCS3B01G214100	chr6D	82.840	169	24	4	6120	6285	147479769	147479935	5.110000e-31	147.0
102	TraesCS3B01G214100	chr6D	81.429	140	26	0	5779	5918	373047454	373047315	1.440000e-21	115.0
103	TraesCS3B01G214100	chr6B	96.889	225	6	1	3286	3509	1612869	1613093	5.980000e-100	375.0
104	TraesCS3B01G214100	chr6B	89.655	116	8	3	2553	2666	679283085	679283198	1.840000e-30	145.0
105	TraesCS3B01G214100	chr6B	89.655	116	8	3	2553	2666	679338450	679338337	1.840000e-30	145.0
106	TraesCS3B01G214100	chrUn	85.440	364	38	11	5776	6124	69202967	69202604	1.290000e-96	364.0
107	TraesCS3B01G214100	chrUn	87.352	253	30	2	4	256	351372662	351372412	8.020000e-74	289.0
108	TraesCS3B01G214100	chrUn	86.957	253	31	2	4	256	12253702	12253452	3.730000e-72	283.0
109	TraesCS3B01G214100	chrUn	85.938	256	36	0	1	256	244965599	244965854	2.240000e-69	274.0
110	TraesCS3B01G214100	chrUn	85.827	254	33	3	4	257	75273936	75274186	3.760000e-67	267.0
111	TraesCS3B01G214100	chrUn	88.199	161	19	0	5964	6124	74746699	74746859	6.470000e-45	193.0
112	TraesCS3B01G214100	chrUn	87.195	164	21	0	5964	6127	401300520	401300357	3.010000e-43	187.0
113	TraesCS3B01G214100	chrUn	88.889	144	14	2	5964	6106	102708211	102708069	6.510000e-40	176.0
114	TraesCS3B01G214100	chrUn	84.659	176	27	0	81	256	304097305	304097130	6.510000e-40	176.0
115	TraesCS3B01G214100	chrUn	91.200	125	11	0	6000	6124	419720947	419721071	3.030000e-38	171.0
116	TraesCS3B01G214100	chrUn	82.286	175	26	5	6120	6291	449542136	449541964	5.110000e-31	147.0
117	TraesCS3B01G214100	chrUn	82.249	169	26	4	6125	6291	116415677	116415511	6.600000e-30	143.0
118	TraesCS3B01G214100	chrUn	82.249	169	26	4	6125	6291	211367223	211367389	6.600000e-30	143.0
119	TraesCS3B01G214100	chrUn	81.143	175	28	5	6120	6291	211375531	211375703	1.110000e-27	135.0
120	TraesCS3B01G214100	chrUn	79.245	159	21	8	5777	5935	88018936	88018790	4.030000e-17	100.0
121	TraesCS3B01G214100	chrUn	91.525	59	5	0	2671	2729	230602085	230602027	1.460000e-11	82.4
122	TraesCS3B01G214100	chr5D	90.650	246	23	0	4	249	58018809	58018564	1.700000e-85	327.0
123	TraesCS3B01G214100	chr5D	89.370	254	25	2	4	256	510057767	510057515	1.020000e-82	318.0
124	TraesCS3B01G214100	chr5D	88.281	256	30	0	1	256	62515106	62515361	2.210000e-79	307.0
125	TraesCS3B01G214100	chr5D	87.352	253	32	0	4	256	328726935	328726683	2.230000e-74	291.0
126	TraesCS3B01G214100	chr5D	93.168	161	11	0	5964	6124	245000645	245000805	2.950000e-58	237.0
127	TraesCS3B01G214100	chr5D	92.547	161	12	0	5964	6124	493285912	493285752	1.370000e-56	231.0
128	TraesCS3B01G214100	chr5D	92.547	161	12	0	5964	6124	529277515	529277675	1.370000e-56	231.0
129	TraesCS3B01G214100	chr5D	92.361	144	11	0	5776	5919	473443908	473444051	8.310000e-49	206.0
130	TraesCS3B01G214100	chr5D	87.719	171	21	0	6124	6294	218551649	218551479	3.860000e-47	200.0
131	TraesCS3B01G214100	chr5D	92.199	141	11	0	5779	5919	519975570	519975710	3.860000e-47	200.0
132	TraesCS3B01G214100	chr5D	86.667	165	20	2	6124	6286	134280882	134281046	1.400000e-41	182.0
133	TraesCS3B01G214100	chr5D	86.179	123	14	3	2546	2666	282351779	282351900	5.140000e-26	130.0
134	TraesCS3B01G214100	chr5D	82.143	112	15	5	2552	2659	547522428	547522318	2.430000e-14	91.6
135	TraesCS3B01G214100	chr4D	84.412	340	46	6	5964	6298	433006886	433006549	1.700000e-85	327.0
136	TraesCS3B01G214100	chr4D	87.451	255	28	4	4	257	96525480	96525229	2.230000e-74	291.0
137	TraesCS3B01G214100	chr4D	88.066	243	29	0	14	256	459314201	459313959	8.020000e-74	289.0
138	TraesCS3B01G214100	chr4D	89.937	159	15	1	5778	5936	83269881	83269724	2.990000e-48	204.0
139	TraesCS3B01G214100	chr4D	87.429	175	20	2	6125	6298	344357008	344356835	3.860000e-47	200.0
140	TraesCS3B01G214100	chr4D	85.549	173	22	3	6120	6289	480493280	480493108	1.810000e-40	178.0
141	TraesCS3B01G214100	chr4D	86.458	96	11	2	2552	2646	375132046	375131952	3.120000e-18	104.0
142	TraesCS3B01G214100	chr2D	89.370	254	26	1	4	256	377501188	377500935	1.020000e-82	318.0
143	TraesCS3B01G214100	chr2D	85.000	120	15	3	2551	2668	5302190	5302308	1.110000e-22	119.0
144	TraesCS3B01G214100	chr2D	91.566	83	5	2	2644	2725	513549445	513549526	5.180000e-21	113.0
145	TraesCS3B01G214100	chr5A	88.189	254	30	0	4	257	476899156	476898903	2.860000e-78	303.0
146	TraesCS3B01G214100	chr5A	91.195	159	14	0	5775	5933	322588555	322588713	3.840000e-52	217.0
147	TraesCS3B01G214100	chr5A	78.182	275	40	12	2543	2814	682942424	682942167	2.360000e-34	158.0
148	TraesCS3B01G214100	chr5A	76.136	264	45	13	2552	2811	632277716	632277965	8.600000e-24	122.0
149	TraesCS3B01G214100	chr1D	88.142	253	30	0	4	256	343276902	343276650	1.030000e-77	302.0
150	TraesCS3B01G214100	chr1D	87.649	251	29	2	7	256	19870832	19870583	2.230000e-74	291.0
151	TraesCS3B01G214100	chr1D	92.121	165	11	2	5964	6128	56755328	56755166	1.370000e-56	231.0
152	TraesCS3B01G214100	chr1D	92.547	161	12	0	5964	6124	164857667	164857827	1.370000e-56	231.0
153	TraesCS3B01G214100	chr1D	91.925	161	13	0	5964	6124	17968218	17968378	6.380000e-55	226.0
154	TraesCS3B01G214100	chr1D	91.925	161	13	0	5964	6124	356922425	356922265	6.380000e-55	226.0
155	TraesCS3B01G214100	chr1D	90.303	165	13	3	5773	5936	151433568	151433406	4.960000e-51	213.0
156	TraesCS3B01G214100	chr1D	92.466	146	10	1	5775	5919	457136822	457136967	2.310000e-49	207.0
157	TraesCS3B01G214100	chr1D	92.908	141	10	0	5779	5919	18119569	18119429	8.310000e-49	206.0
158	TraesCS3B01G214100	chr1D	91.667	144	12	0	5776	5919	481679187	481679330	3.860000e-47	200.0
159	TraesCS3B01G214100	chr1D	87.283	173	21	1	6120	6291	437141536	437141708	5.000000e-46	196.0
160	TraesCS3B01G214100	chr1D	91.489	141	12	0	5779	5919	18113254	18113114	1.800000e-45	195.0
161	TraesCS3B01G214100	chr1D	88.272	162	19	0	5775	5936	56755572	56755411	1.800000e-45	195.0
162	TraesCS3B01G214100	chr1D	88.272	162	19	0	6125	6286	216845217	216845056	1.800000e-45	195.0
163	TraesCS3B01G214100	chr1D	88.889	153	15	1	5774	5924	409576125	409575973	3.010000e-43	187.0
164	TraesCS3B01G214100	chr1D	86.503	163	18	3	6125	6285	216352662	216352502	6.510000e-40	176.0
165	TraesCS3B01G214100	chr1D	78.365	208	32	9	2552	2756	433250140	433249943	8.600000e-24	122.0
166	TraesCS3B01G214100	chr1D	86.364	66	5	3	2733	2797	46100182	46100244	1.140000e-07	69.4
167	TraesCS3B01G214100	chr6A	86.826	167	22	0	6125	6291	433546453	433546619	3.010000e-43	187.0

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS3B01G214100	chr3B	254031998	254038317	6319	True	11671.00	11671	100.00000	1	6320	1	chr3B.!!$R2	6319
1	TraesCS3B01G214100	chr3D	175011218	175015588	4370	True	1848.75	4178	95.89825	703	5780	4	chr3D.!!$R6	5077
2	TraesCS3B01G214100	chr3D	583534225	583534855	630	True	680.00	680	86.20700	4	636	1	chr3D.!!$R5	632
3	TraesCS3B01G214100	chr3A	215202737	215207211	4474	True	1386.40	4169	94.05980	658	5780	5	chr3A.!!$R2	5122
4	TraesCS3B01G214100	chr7A	586197582	586200539	2957	False	695.00	697	95.02800	3995	4437	2	chr7A.!!$F2	442
5	TraesCS3B01G214100	chr2B	200034429	200034937	508	True	490.00	490	84.05300	5	536	1	chr2B.!!$R1	531
6	TraesCS3B01G214100	chr2A	774624252	774624838	586	True	643.00	643	86.50900	41	630	1	chr2A.!!$R2	589

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
613	618	0.036765	TAAGATGTCACACGTGGGGC	60.037	55.000	17.33	17.33	0.00	5.80	F
745	750	0.456312	ACTGATTCGAGCCGACGTTC	60.456	55.000	0.00	0.00	34.89	3.95	F
818	823	0.598065	GTGACCACAGGAACAATGGC	59.402	55.000	0.00	0.00	38.94	4.40	F
2025	2031	1.131883	GCAATCACACTGGAGCATGTC	59.868	52.381	0.00	0.00	0.00	3.06	F
2828	2857	1.173043	ATGTACCACCAAACCGCATG	58.827	50.000	0.00	0.00	0.00	4.06	F
3477	3517	0.248580	TGGCAACCTACGTATACGCG	60.249	55.000	24.64	15.48	44.43	6.01	F
3586	3626	0.744874	TGGATAGTGTAGACGCTGGC	59.255	55.000	5.99	0.00	37.28	4.85	F
5243	6746	0.400213	TCAAACCATGGAAGCTCCGT	59.600	50.000	21.47	0.00	40.17	4.69	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1518	1524	0.837691	TGGCAAGCCTCTTCTCCTCA	60.838	55.000	12.96	0.00	36.94	3.86	R
2147	2154	1.117150	GCCGACTAACCATACTCCCA	58.883	55.000	0.00	0.00	0.00	4.37	R
2241	2252	1.135315	CAAAATCACTCAGCGGCCG	59.865	57.895	24.05	24.05	0.00	6.13	R
2833	2862	0.110238	CAGGAATCGGTTGCAACGTG	60.110	55.000	22.67	17.34	0.00	4.49	R
4362	4411	2.514160	GGGAAAATCCATCCTACCACCT	59.486	50.000	0.00	0.00	38.64	4.00	R
5094	6597	0.111061	TCTCTGCAGCATGGTTTGGT	59.889	50.000	9.47	0.00	35.86	3.67	R
5280	6783	2.486636	TAACTGGCGTGACAGGCTCG	62.487	60.000	18.76	12.43	42.75	5.03	R
6120	7803	0.107897	TTATGCGGGCGTCACAATCT	60.108	50.000	0.00	0.00	0.00	2.40	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
35	36	1.902508	CACAGTCACCACCTAGTCCAT	59.097	52.381	0.00	0.00	0.00	3.41
38	39	0.613260	GTCACCACCTAGTCCATGCA	59.387	55.000	0.00	0.00	0.00	3.96
55	56	2.025418	CACGTGTGGGCGAACTACC	61.025	63.158	7.58	0.00	35.59	3.18
59	60	1.601166	GTGTGGGCGAACTACCTTTT	58.399	50.000	0.00	0.00	0.00	2.27
170	171	3.754965	TGCTAGATGGCAACTTCAGTTT	58.245	40.909	1.54	0.00	42.97	2.66
173	174	2.851195	AGATGGCAACTTCAGTTTCGT	58.149	42.857	0.00	0.00	42.97	3.85
185	186	1.529438	CAGTTTCGTGTACGTGGCAAT	59.471	47.619	0.00	0.00	40.80	3.56
225	226	7.164803	TGACAACTGTGATTAACCATACATGA	58.835	34.615	0.00	0.00	0.00	3.07
249	250	4.842531	ACTATGGTTGGATCACACATGA	57.157	40.909	0.00	0.00	39.83	3.07
282	285	2.481568	GGTAACTAAAGTGTCAACCCGC	59.518	50.000	0.00	0.00	0.00	6.13
289	292	0.539986	AGTGTCAACCCGCGGATAAT	59.460	50.000	30.73	5.96	0.00	1.28
299	302	7.332678	GTCAACCCGCGGATAATTATAGTTAAT	59.667	37.037	30.73	0.00	0.00	1.40
301	304	7.179076	ACCCGCGGATAATTATAGTTAATCT	57.821	36.000	30.73	0.00	0.00	2.40
323	326	2.522836	ATAGAGAGAGTTGCCATGCG	57.477	50.000	0.00	0.00	0.00	4.73
341	344	6.724263	CCATGCGTTTATAACTAGATTTGCA	58.276	36.000	0.00	0.00	0.00	4.08
343	346	7.165812	CCATGCGTTTATAACTAGATTTGCAAC	59.834	37.037	0.00	0.00	31.84	4.17
346	349	6.189567	CGTTTATAACTAGATTTGCAACCCG	58.810	40.000	0.00	0.00	0.00	5.28
372	375	1.284785	CTAAAGTTGCCATCCCAGGGA	59.715	52.381	11.90	11.90	35.55	4.20
391	394	5.045869	CAGGGATAACTAAAGTGTCTTCCCA	60.046	44.000	16.22	0.00	40.58	4.37
395	399	2.322658	ACTAAAGTGTCTTCCCACGGA	58.677	47.619	0.00	0.00	40.33	4.69
400	404	1.553704	AGTGTCTTCCCACGGATAACC	59.446	52.381	0.00	0.00	40.33	2.85
415	419	0.319727	TAACCAACGTAGGTGTGCCG	60.320	55.000	0.00	0.00	42.25	5.69
423	427	3.323758	TAGGTGTGCCGGGATGTGC	62.324	63.158	2.18	0.00	40.50	4.57
435	440	1.062525	GATGTGCGACGGATTTGCC	59.937	57.895	0.00	0.00	32.85	4.52
442	447	3.083600	GACGGATTTGCCTCGTGCG	62.084	63.158	0.00	0.00	45.60	5.34
483	488	3.005050	TGAGTAGTAGTTGTTGGACGTGG	59.995	47.826	0.00	0.00	0.00	4.94
484	489	2.298163	AGTAGTAGTTGTTGGACGTGGG	59.702	50.000	0.00	0.00	0.00	4.61
531	536	3.627577	GTGTGGGCAATTCTCATATTCGT	59.372	43.478	0.00	0.00	0.00	3.85
561	566	3.241493	CCGTGTGGGTTGCATTCTA	57.759	52.632	0.00	0.00	0.00	2.10
588	593	2.268920	CATAGGCTGTGTGGGCGT	59.731	61.111	2.68	0.00	36.85	5.68
601	606	2.764010	TGTGGGCGTATGTCTAAGATGT	59.236	45.455	0.00	0.00	0.00	3.06
610	615	3.297830	TGTCTAAGATGTCACACGTGG	57.702	47.619	21.57	9.11	0.00	4.94
613	618	0.036765	TAAGATGTCACACGTGGGGC	60.037	55.000	17.33	17.33	0.00	5.80
632	637	3.675467	GCGAATATCGGCACTCTTTTT	57.325	42.857	1.64	0.00	40.84	1.94
633	638	4.789095	GCGAATATCGGCACTCTTTTTA	57.211	40.909	1.64	0.00	40.84	1.52
634	639	5.151632	GCGAATATCGGCACTCTTTTTAA	57.848	39.130	1.64	0.00	40.84	1.52
635	640	5.198274	GCGAATATCGGCACTCTTTTTAAG	58.802	41.667	1.64	0.00	40.84	1.85
636	641	5.220605	GCGAATATCGGCACTCTTTTTAAGT	60.221	40.000	1.64	0.00	40.84	2.24
637	642	6.674760	GCGAATATCGGCACTCTTTTTAAGTT	60.675	38.462	1.64	0.00	40.84	2.66
638	643	7.464977	GCGAATATCGGCACTCTTTTTAAGTTA	60.465	37.037	1.64	0.00	40.84	2.24
639	644	8.385111	CGAATATCGGCACTCTTTTTAAGTTAA	58.615	33.333	0.00	0.00	36.00	2.01
642	647	7.681939	ATCGGCACTCTTTTTAAGTTAATGA	57.318	32.000	0.00	0.00	0.00	2.57
643	648	7.499321	TCGGCACTCTTTTTAAGTTAATGAA	57.501	32.000	0.00	0.00	0.00	2.57
644	649	7.932335	TCGGCACTCTTTTTAAGTTAATGAAA	58.068	30.769	0.00	0.00	0.00	2.69
645	650	7.858879	TCGGCACTCTTTTTAAGTTAATGAAAC	59.141	33.333	0.00	0.00	38.46	2.78
646	651	7.149192	CGGCACTCTTTTTAAGTTAATGAAACG	60.149	37.037	0.00	0.00	43.29	3.60
647	652	7.858879	GGCACTCTTTTTAAGTTAATGAAACGA	59.141	33.333	0.00	0.00	43.29	3.85
648	653	8.892905	GCACTCTTTTTAAGTTAATGAAACGAG	58.107	33.333	9.07	9.07	43.29	4.18
649	654	8.892905	CACTCTTTTTAAGTTAATGAAACGAGC	58.107	33.333	9.99	0.00	43.29	5.03
650	655	8.837389	ACTCTTTTTAAGTTAATGAAACGAGCT	58.163	29.630	9.99	0.00	43.29	4.09
651	656	9.665264	CTCTTTTTAAGTTAATGAAACGAGCTT	57.335	29.630	0.00	0.00	43.29	3.74
672	677	5.671493	CTTTATTAGAAGTCATCCCACGGT	58.329	41.667	0.00	0.00	0.00	4.83
680	685	0.924090	TCATCCCACGGTCTCCTCTA	59.076	55.000	0.00	0.00	0.00	2.43
682	687	2.714793	TCATCCCACGGTCTCCTCTATA	59.285	50.000	0.00	0.00	0.00	1.31
688	693	3.435313	CCACGGTCTCCTCTATACTTCCT	60.435	52.174	0.00	0.00	0.00	3.36
689	694	3.816523	CACGGTCTCCTCTATACTTCCTC	59.183	52.174	0.00	0.00	0.00	3.71
697	702	7.923878	GTCTCCTCTATACTTCCTCACAAATTC	59.076	40.741	0.00	0.00	0.00	2.17
712	717	2.080286	AATTCACGGACAGTTCCTCG	57.920	50.000	0.00	0.00	40.23	4.63
745	750	0.456312	ACTGATTCGAGCCGACGTTC	60.456	55.000	0.00	0.00	34.89	3.95
782	787	0.673985	GAAAGTGTTGTTCCTGGCCC	59.326	55.000	0.00	0.00	0.00	5.80
815	820	0.762418	TCGGTGACCACAGGAACAAT	59.238	50.000	1.11	0.00	0.00	2.71
818	823	0.598065	GTGACCACAGGAACAATGGC	59.402	55.000	0.00	0.00	38.94	4.40
820	825	1.586154	GACCACAGGAACAATGGCCG	61.586	60.000	0.00	0.00	38.94	6.13
821	826	1.603455	CCACAGGAACAATGGCCGT	60.603	57.895	0.00	0.00	0.00	5.68
871	877	4.030452	GTGCCTGCCACGCTGTTC	62.030	66.667	0.00	0.00	34.22	3.18
900	906	4.142071	CCTCTCTTCACTCCATTCGATTCA	60.142	45.833	0.00	0.00	0.00	2.57
970	976	2.522436	TCGACTCCACCCAACCGT	60.522	61.111	0.00	0.00	0.00	4.83
2025	2031	1.131883	GCAATCACACTGGAGCATGTC	59.868	52.381	0.00	0.00	0.00	3.06
2080	2087	6.893958	ATAGTATTCTCTGTTCACTTTGCG	57.106	37.500	0.00	0.00	0.00	4.85
2091	2098	5.885881	TGTTCACTTTGCGTTCAGTTATTT	58.114	33.333	0.00	0.00	0.00	1.40
2401	2412	8.950208	ATTCTTAAGCCTTTATGTCTAGTCAC	57.050	34.615	0.00	0.00	0.00	3.67
2503	2522	3.439476	AGAACATTCTGATGCAGCACTTC	59.561	43.478	0.00	0.00	36.72	3.01
2828	2857	1.173043	ATGTACCACCAAACCGCATG	58.827	50.000	0.00	0.00	0.00	4.06
2833	2862	1.288752	CACCAAACCGCATGGGAAC	59.711	57.895	12.02	0.00	42.48	3.62
2853	2882	0.534203	ACGTTGCAACCGATTCCTGT	60.534	50.000	23.42	10.07	0.00	4.00
2959	2988	6.776094	GTGAACTATACTTCACCATTTCAGC	58.224	40.000	11.97	0.00	42.91	4.26
3013	3042	7.669722	AGCCAATGATACCTCTGTTTTCTTTTA	59.330	33.333	0.00	0.00	0.00	1.52
3092	3121	0.538057	TTGTTGGCTGGAGGCTCAAG	60.538	55.000	14.90	14.90	41.69	3.02
3111	3149	6.176975	TCAAGTTTGTTGTGTAGTCTTGTG	57.823	37.500	0.00	0.00	34.43	3.33
3112	3150	5.935206	TCAAGTTTGTTGTGTAGTCTTGTGA	59.065	36.000	0.00	0.00	34.43	3.58
3113	3151	5.796350	AGTTTGTTGTGTAGTCTTGTGAC	57.204	39.130	0.00	0.00	43.22	3.67
3312	3352	9.787435	ATATACTACCTCTCTCTCAGTTTACAG	57.213	37.037	0.00	0.00	0.00	2.74
3313	3353	5.258051	ACTACCTCTCTCTCAGTTTACAGG	58.742	45.833	0.00	0.00	0.00	4.00
3314	3354	3.436243	ACCTCTCTCTCAGTTTACAGGG	58.564	50.000	0.00	0.00	0.00	4.45
3315	3355	2.167487	CCTCTCTCTCAGTTTACAGGGC	59.833	54.545	0.00	0.00	0.00	5.19
3316	3356	1.819288	TCTCTCTCAGTTTACAGGGCG	59.181	52.381	0.00	0.00	0.00	6.13
3317	3357	1.546476	CTCTCTCAGTTTACAGGGCGT	59.454	52.381	0.00	0.00	0.00	5.68
3318	3358	1.272490	TCTCTCAGTTTACAGGGCGTG	59.728	52.381	5.50	5.50	0.00	5.34
3319	3359	0.320421	TCTCAGTTTACAGGGCGTGC	60.320	55.000	7.17	0.00	0.00	5.34
3320	3360	1.626654	CTCAGTTTACAGGGCGTGCG	61.627	60.000	7.17	0.00	0.00	5.34
3321	3361	3.047877	AGTTTACAGGGCGTGCGC	61.048	61.111	7.17	8.17	41.06	6.09
3322	3362	4.439472	GTTTACAGGGCGTGCGCG	62.439	66.667	16.86	16.86	43.06	6.86
3323	3363	4.973055	TTTACAGGGCGTGCGCGT	62.973	61.111	22.18	2.94	43.06	6.01
3324	3364	3.570621	TTTACAGGGCGTGCGCGTA	62.571	57.895	22.18	0.00	43.06	4.42
3325	3365	4.781959	TACAGGGCGTGCGCGTAC	62.782	66.667	22.18	17.94	43.06	3.67
3332	3372	4.564116	CGTGCGCGTACCCCTAGG	62.564	72.222	21.71	0.06	40.04	3.02
3334	3374	3.142838	TGCGCGTACCCCTAGGTC	61.143	66.667	8.43	0.00	46.45	3.85
3335	3375	4.261781	GCGCGTACCCCTAGGTCG	62.262	72.222	8.43	8.12	46.45	4.79
3336	3376	2.825836	CGCGTACCCCTAGGTCGT	60.826	66.667	8.29	6.00	46.45	4.34
3337	3377	2.828128	CGCGTACCCCTAGGTCGTC	61.828	68.421	8.29	3.46	46.45	4.20
3338	3378	1.750399	GCGTACCCCTAGGTCGTCA	60.750	63.158	8.29	0.00	46.45	4.35
3339	3379	1.315257	GCGTACCCCTAGGTCGTCAA	61.315	60.000	8.29	0.00	46.45	3.18
3340	3380	1.396653	CGTACCCCTAGGTCGTCAAT	58.603	55.000	8.29	0.00	46.45	2.57
3341	3381	1.753073	CGTACCCCTAGGTCGTCAATT	59.247	52.381	8.29	0.00	46.45	2.32
3342	3382	2.167075	CGTACCCCTAGGTCGTCAATTT	59.833	50.000	8.29	0.00	46.45	1.82
3343	3383	2.781681	ACCCCTAGGTCGTCAATTTG	57.218	50.000	8.29	0.00	46.45	2.32
3344	3384	2.262637	ACCCCTAGGTCGTCAATTTGA	58.737	47.619	8.29	0.00	46.45	2.69
3345	3385	2.027469	ACCCCTAGGTCGTCAATTTGAC	60.027	50.000	17.76	17.76	46.45	3.18
3346	3386	5.201262	ACCCCTAGGTCGTCAATTTGACC	62.201	52.174	20.87	10.15	46.45	4.02
3354	3394	5.622770	GTCGTCAATTTGACCAACCTAAT	57.377	39.130	20.87	0.00	44.20	1.73
3355	3395	6.730960	GTCGTCAATTTGACCAACCTAATA	57.269	37.500	20.87	0.00	44.20	0.98
3356	3396	6.540205	GTCGTCAATTTGACCAACCTAATAC	58.460	40.000	20.87	5.03	44.20	1.89
3357	3397	6.148150	GTCGTCAATTTGACCAACCTAATACA	59.852	38.462	20.87	0.00	44.20	2.29
3358	3398	6.711194	TCGTCAATTTGACCAACCTAATACAA	59.289	34.615	20.87	0.00	44.20	2.41
3359	3399	7.021196	CGTCAATTTGACCAACCTAATACAAG	58.979	38.462	20.87	1.46	44.20	3.16
3360	3400	7.308348	CGTCAATTTGACCAACCTAATACAAGT	60.308	37.037	20.87	0.00	44.20	3.16
3361	3401	8.357402	GTCAATTTGACCAACCTAATACAAGTT	58.643	33.333	17.07	0.00	41.37	2.66
3362	3402	9.575868	TCAATTTGACCAACCTAATACAAGTTA	57.424	29.630	0.00	0.00	0.00	2.24
3415	3455	7.772166	ACTTTGGAGTTTCTACTTTCAAAAGG	58.228	34.615	7.37	0.00	37.37	3.11
3416	3456	7.396339	ACTTTGGAGTTTCTACTTTCAAAAGGT	59.604	33.333	7.37	0.00	37.37	3.50
3417	3457	8.810990	TTTGGAGTTTCTACTTTCAAAAGGTA	57.189	30.769	7.37	0.00	40.31	3.08
3418	3458	8.990163	TTGGAGTTTCTACTTTCAAAAGGTAT	57.010	30.769	7.37	0.00	40.31	2.73
3465	3505	5.669164	TTAGGGTGATAAAATTGGCAACC	57.331	39.130	0.00	0.00	38.39	3.77
3466	3506	3.790126	AGGGTGATAAAATTGGCAACCT	58.210	40.909	0.00	0.00	43.35	3.50
3467	3507	4.941713	AGGGTGATAAAATTGGCAACCTA	58.058	39.130	0.00	0.00	46.13	3.08
3468	3508	4.709886	AGGGTGATAAAATTGGCAACCTAC	59.290	41.667	0.00	0.00	46.13	3.18
3469	3509	4.439563	GGGTGATAAAATTGGCAACCTACG	60.440	45.833	0.00	0.00	35.26	3.51
3470	3510	4.157105	GGTGATAAAATTGGCAACCTACGT	59.843	41.667	0.00	0.00	0.00	3.57
3471	3511	5.354792	GGTGATAAAATTGGCAACCTACGTA	59.645	40.000	0.00	0.00	0.00	3.57
3472	3512	6.038936	GGTGATAAAATTGGCAACCTACGTAT	59.961	38.462	0.00	0.00	0.00	3.06
3473	3513	7.227116	GGTGATAAAATTGGCAACCTACGTATA	59.773	37.037	0.00	0.00	0.00	1.47
3474	3514	8.066000	GTGATAAAATTGGCAACCTACGTATAC	58.934	37.037	0.00	0.00	0.00	1.47
3475	3515	5.473796	AAAATTGGCAACCTACGTATACG	57.526	39.130	23.24	23.24	46.33	3.06
3476	3516	1.925229	TTGGCAACCTACGTATACGC	58.075	50.000	24.64	6.65	44.43	4.42
3477	3517	0.248580	TGGCAACCTACGTATACGCG	60.249	55.000	24.64	15.48	44.43	6.01
3479	3519	1.002900	GGCAACCTACGTATACGCGTA	60.003	52.381	24.64	22.94	45.06	4.42
3486	3526	2.744787	ACGTATACGCGTAGGACTTG	57.255	50.000	24.78	14.24	43.83	3.16
3487	3527	2.009774	ACGTATACGCGTAGGACTTGT	58.990	47.619	24.78	14.80	43.83	3.16
3488	3528	3.194861	ACGTATACGCGTAGGACTTGTA	58.805	45.455	24.78	7.25	43.83	2.41
3489	3529	3.621268	ACGTATACGCGTAGGACTTGTAA	59.379	43.478	24.78	0.00	43.83	2.41
3490	3530	4.094294	ACGTATACGCGTAGGACTTGTAAA	59.906	41.667	24.78	0.00	43.83	2.01
3491	3531	4.434588	CGTATACGCGTAGGACTTGTAAAC	59.565	45.833	24.78	8.16	0.00	2.01
3492	3532	4.708726	ATACGCGTAGGACTTGTAAACT	57.291	40.909	24.78	0.00	0.00	2.66
3493	3533	2.669364	ACGCGTAGGACTTGTAAACTG	58.331	47.619	11.67	0.00	0.00	3.16
3494	3534	2.294233	ACGCGTAGGACTTGTAAACTGA	59.706	45.455	11.67	0.00	0.00	3.41
3495	3535	3.243501	ACGCGTAGGACTTGTAAACTGAA	60.244	43.478	11.67	0.00	0.00	3.02
3496	3536	3.737266	CGCGTAGGACTTGTAAACTGAAA	59.263	43.478	0.00	0.00	0.00	2.69
3497	3537	4.375706	CGCGTAGGACTTGTAAACTGAAAC	60.376	45.833	0.00	0.00	0.00	2.78
3498	3538	4.375706	GCGTAGGACTTGTAAACTGAAACG	60.376	45.833	0.00	0.00	0.00	3.60
3499	3539	4.149396	CGTAGGACTTGTAAACTGAAACGG	59.851	45.833	0.00	0.00	0.00	4.44
3500	3540	4.411256	AGGACTTGTAAACTGAAACGGA	57.589	40.909	0.00	0.00	0.00	4.69
3501	3541	4.377897	AGGACTTGTAAACTGAAACGGAG	58.622	43.478	0.00	0.00	0.00	4.63
3502	3542	3.497262	GGACTTGTAAACTGAAACGGAGG	59.503	47.826	0.00	0.00	0.00	4.30
3503	3543	4.124970	GACTTGTAAACTGAAACGGAGGT	58.875	43.478	0.00	0.00	0.00	3.85
3504	3544	5.280654	ACTTGTAAACTGAAACGGAGGTA	57.719	39.130	0.00	0.00	0.00	3.08
3505	3545	5.295152	ACTTGTAAACTGAAACGGAGGTAG	58.705	41.667	0.00	0.00	0.00	3.18
3581	3621	8.300286	AGTGATATTGATTGGATAGTGTAGACG	58.700	37.037	0.00	0.00	0.00	4.18
3582	3622	7.062371	GTGATATTGATTGGATAGTGTAGACGC	59.938	40.741	0.00	0.00	0.00	5.19
3583	3623	5.537300	ATTGATTGGATAGTGTAGACGCT	57.463	39.130	0.78	0.78	40.27	5.07
3584	3624	4.307443	TGATTGGATAGTGTAGACGCTG	57.693	45.455	5.99	0.00	37.28	5.18
3585	3625	3.068165	TGATTGGATAGTGTAGACGCTGG	59.932	47.826	5.99	0.00	37.28	4.85
3586	3626	0.744874	TGGATAGTGTAGACGCTGGC	59.255	55.000	5.99	0.00	37.28	4.85
3587	3627	0.744874	GGATAGTGTAGACGCTGGCA	59.255	55.000	5.99	0.00	37.28	4.92
3588	3628	1.536284	GGATAGTGTAGACGCTGGCAC	60.536	57.143	5.99	0.00	37.28	5.01
4062	4111	3.490078	CCACCACTTGCGTTTTGTATGTT	60.490	43.478	0.00	0.00	0.00	2.71
4096	4145	6.525578	TCTGTTGAAACCGAGAGTATGTAT	57.474	37.500	0.00	0.00	0.00	2.29
4557	5804	4.229304	TGGTGTTGGGATACTGGTTATG	57.771	45.455	0.00	0.00	0.00	1.90
4961	6435	8.680001	GGTTAAATACGTAATTTGGTCTTGGAT	58.320	33.333	0.00	0.00	38.29	3.41
5094	6597	0.899720	GAACACATACCGAGACCCCA	59.100	55.000	0.00	0.00	0.00	4.96
5243	6746	0.400213	TCAAACCATGGAAGCTCCGT	59.600	50.000	21.47	0.00	40.17	4.69
5413	6916	9.906660	CTAGTTTCAGTCTAGGATTATGTCATC	57.093	37.037	0.00	0.00	33.40	2.92
5436	6939	9.965824	CATCCACACTCTGTAAAAAGTTAAATT	57.034	29.630	0.00	0.00	0.00	1.82
5597	7100	5.712152	AAGAAAAATGCTTCTACCCTGTG	57.288	39.130	0.00	0.00	34.49	3.66
5691	7366	1.003718	CAGAAGGTCGGGTTCCACC	60.004	63.158	0.00	0.00	37.60	4.61
5787	7470	5.376854	TTTTTGGCATCTTAGAGCAACTC	57.623	39.130	0.00	0.00	0.00	3.01
5788	7471	2.698855	TGGCATCTTAGAGCAACTCC	57.301	50.000	6.15	0.00	0.00	3.85
5789	7472	1.908619	TGGCATCTTAGAGCAACTCCA	59.091	47.619	6.15	0.00	0.00	3.86
5790	7473	2.305635	TGGCATCTTAGAGCAACTCCAA	59.694	45.455	6.15	0.00	0.00	3.53
5791	7474	3.244875	TGGCATCTTAGAGCAACTCCAAA	60.245	43.478	6.15	0.00	0.00	3.28
5792	7475	3.376546	GGCATCTTAGAGCAACTCCAAAG	59.623	47.826	6.15	0.00	0.00	2.77
5793	7476	3.376546	GCATCTTAGAGCAACTCCAAAGG	59.623	47.826	7.20	0.00	30.08	3.11
5794	7477	3.703001	TCTTAGAGCAACTCCAAAGGG	57.297	47.619	7.20	0.00	30.08	3.95
5795	7478	2.087646	CTTAGAGCAACTCCAAAGGGC	58.912	52.381	0.00	0.00	0.00	5.19
5796	7479	0.328258	TAGAGCAACTCCAAAGGGCC	59.672	55.000	0.00	0.00	0.00	5.80
5797	7480	2.282462	AGCAACTCCAAAGGGCCG	60.282	61.111	0.00	0.00	0.00	6.13
5798	7481	2.282180	GCAACTCCAAAGGGCCGA	60.282	61.111	0.00	0.00	0.00	5.54
5799	7482	2.626780	GCAACTCCAAAGGGCCGAC	61.627	63.158	0.00	0.00	0.00	4.79
5800	7483	1.971695	CAACTCCAAAGGGCCGACC	60.972	63.158	0.00	0.00	40.67	4.79
5810	7493	2.822701	GGCCGACCCATTTCGTCC	60.823	66.667	0.00	0.00	37.29	4.79
5811	7494	3.192922	GCCGACCCATTTCGTCCG	61.193	66.667	0.00	0.00	37.29	4.79
5812	7495	3.192922	CCGACCCATTTCGTCCGC	61.193	66.667	0.00	0.00	37.29	5.54
5813	7496	3.192922	CGACCCATTTCGTCCGCC	61.193	66.667	0.00	0.00	34.16	6.13
5814	7497	2.267961	GACCCATTTCGTCCGCCT	59.732	61.111	0.00	0.00	0.00	5.52
5815	7498	2.046314	ACCCATTTCGTCCGCCTG	60.046	61.111	0.00	0.00	0.00	4.85
5816	7499	3.508840	CCCATTTCGTCCGCCTGC	61.509	66.667	0.00	0.00	0.00	4.85
5817	7500	2.745884	CCATTTCGTCCGCCTGCA	60.746	61.111	0.00	0.00	0.00	4.41
5818	7501	2.114670	CCATTTCGTCCGCCTGCAT	61.115	57.895	0.00	0.00	0.00	3.96
5819	7502	1.353103	CATTTCGTCCGCCTGCATC	59.647	57.895	0.00	0.00	0.00	3.91
5820	7503	1.819632	ATTTCGTCCGCCTGCATCC	60.820	57.895	0.00	0.00	0.00	3.51
5821	7504	4.812476	TTCGTCCGCCTGCATCCG	62.812	66.667	0.00	0.00	0.00	4.18
5824	7507	2.746277	GTCCGCCTGCATCCGTTT	60.746	61.111	5.58	0.00	0.00	3.60
5825	7508	2.745884	TCCGCCTGCATCCGTTTG	60.746	61.111	5.58	0.00	0.00	2.93
5826	7509	3.814268	CCGCCTGCATCCGTTTGG	61.814	66.667	5.58	0.00	0.00	3.28
5827	7510	3.814268	CGCCTGCATCCGTTTGGG	61.814	66.667	0.00	0.00	35.24	4.12
5828	7511	2.676471	GCCTGCATCCGTTTGGGT	60.676	61.111	0.00	0.00	37.00	4.51
5829	7512	2.700773	GCCTGCATCCGTTTGGGTC	61.701	63.158	0.00	0.00	37.00	4.46
5830	7513	2.398554	CCTGCATCCGTTTGGGTCG	61.399	63.158	0.00	0.00	37.00	4.79
5832	7515	3.810896	GCATCCGTTTGGGTCGGC	61.811	66.667	0.00	0.00	46.49	5.54
5833	7516	2.359354	CATCCGTTTGGGTCGGCA	60.359	61.111	0.00	0.00	46.49	5.69
5834	7517	1.748879	CATCCGTTTGGGTCGGCAT	60.749	57.895	0.00	0.00	46.49	4.40
5835	7518	1.748879	ATCCGTTTGGGTCGGCATG	60.749	57.895	0.00	0.00	46.49	4.06
5836	7519	3.439540	CCGTTTGGGTCGGCATGG	61.440	66.667	0.00	0.00	41.48	3.66
5837	7520	2.359354	CGTTTGGGTCGGCATGGA	60.359	61.111	0.00	0.00	0.00	3.41
5838	7521	2.686816	CGTTTGGGTCGGCATGGAC	61.687	63.158	0.00	0.00	36.18	4.02
5839	7522	1.602323	GTTTGGGTCGGCATGGACA	60.602	57.895	0.00	0.00	38.70	4.02
5840	7523	1.151679	TTTGGGTCGGCATGGACAA	59.848	52.632	0.00	0.00	38.70	3.18
5841	7524	0.468214	TTTGGGTCGGCATGGACAAA	60.468	50.000	0.00	0.00	38.70	2.83
5842	7525	0.468214	TTGGGTCGGCATGGACAAAA	60.468	50.000	0.00	0.00	38.70	2.44
5843	7526	0.893270	TGGGTCGGCATGGACAAAAG	60.893	55.000	0.00	0.00	38.70	2.27
5844	7527	0.893727	GGGTCGGCATGGACAAAAGT	60.894	55.000	0.00	0.00	38.70	2.66
5845	7528	0.240945	GGTCGGCATGGACAAAAGTG	59.759	55.000	0.00	0.00	38.70	3.16
5846	7529	1.234821	GTCGGCATGGACAAAAGTGA	58.765	50.000	0.00	0.00	36.91	3.41
5847	7530	1.069227	GTCGGCATGGACAAAAGTGAC	60.069	52.381	0.00	0.00	36.91	3.67
5848	7531	0.110238	CGGCATGGACAAAAGTGACG	60.110	55.000	0.00	0.00	36.70	4.35
5849	7532	0.240945	GGCATGGACAAAAGTGACGG	59.759	55.000	0.00	0.00	0.00	4.79
5850	7533	0.387239	GCATGGACAAAAGTGACGGC	60.387	55.000	0.00	0.00	0.00	5.68
5851	7534	0.240945	CATGGACAAAAGTGACGGCC	59.759	55.000	0.00	0.00	0.00	6.13
5852	7535	0.893727	ATGGACAAAAGTGACGGCCC	60.894	55.000	0.00	0.00	0.00	5.80
5853	7536	1.527380	GGACAAAAGTGACGGCCCA	60.527	57.895	0.00	0.00	0.00	5.36
5854	7537	1.104577	GGACAAAAGTGACGGCCCAA	61.105	55.000	0.00	0.00	0.00	4.12
5855	7538	0.030235	GACAAAAGTGACGGCCCAAC	59.970	55.000	0.00	0.00	0.00	3.77
5856	7539	1.008995	CAAAAGTGACGGCCCAACG	60.009	57.895	0.00	0.00	40.31	4.10
5867	7550	4.939368	CCCAACGTGCCGACCCAA	62.939	66.667	0.00	0.00	0.00	4.12
5868	7551	2.902846	CCAACGTGCCGACCCAAA	60.903	61.111	0.00	0.00	0.00	3.28
5869	7552	2.330041	CAACGTGCCGACCCAAAC	59.670	61.111	0.00	0.00	0.00	2.93
5870	7553	2.903350	AACGTGCCGACCCAAACC	60.903	61.111	0.00	0.00	0.00	3.27
5871	7554	4.941309	ACGTGCCGACCCAAACCC	62.941	66.667	1.50	0.00	0.00	4.11
5872	7555	4.939368	CGTGCCGACCCAAACCCA	62.939	66.667	0.00	0.00	0.00	4.51
5873	7556	2.519780	GTGCCGACCCAAACCCAA	60.520	61.111	0.00	0.00	0.00	4.12
5874	7557	2.128507	GTGCCGACCCAAACCCAAA	61.129	57.895	0.00	0.00	0.00	3.28
5875	7558	1.152440	TGCCGACCCAAACCCAAAT	60.152	52.632	0.00	0.00	0.00	2.32
5876	7559	1.182385	TGCCGACCCAAACCCAAATC	61.182	55.000	0.00	0.00	0.00	2.17
5877	7560	1.182385	GCCGACCCAAACCCAAATCA	61.182	55.000	0.00	0.00	0.00	2.57
5878	7561	0.601057	CCGACCCAAACCCAAATCAC	59.399	55.000	0.00	0.00	0.00	3.06
5879	7562	0.239879	CGACCCAAACCCAAATCACG	59.760	55.000	0.00	0.00	0.00	4.35
5880	7563	1.324383	GACCCAAACCCAAATCACGT	58.676	50.000	0.00	0.00	0.00	4.49
5881	7564	1.268625	GACCCAAACCCAAATCACGTC	59.731	52.381	0.00	0.00	0.00	4.34
5882	7565	1.323412	CCCAAACCCAAATCACGTCA	58.677	50.000	0.00	0.00	0.00	4.35
5883	7566	1.269448	CCCAAACCCAAATCACGTCAG	59.731	52.381	0.00	0.00	0.00	3.51
5884	7567	1.335872	CCAAACCCAAATCACGTCAGC	60.336	52.381	0.00	0.00	0.00	4.26
5885	7568	1.608590	CAAACCCAAATCACGTCAGCT	59.391	47.619	0.00	0.00	0.00	4.24
5886	7569	1.981256	AACCCAAATCACGTCAGCTT	58.019	45.000	0.00	0.00	0.00	3.74
5887	7570	1.523758	ACCCAAATCACGTCAGCTTC	58.476	50.000	0.00	0.00	0.00	3.86
5888	7571	0.443869	CCCAAATCACGTCAGCTTCG	59.556	55.000	6.53	6.53	0.00	3.79
5889	7572	0.179215	CCAAATCACGTCAGCTTCGC	60.179	55.000	7.81	0.00	0.00	4.70
5890	7573	0.517132	CAAATCACGTCAGCTTCGCG	60.517	55.000	0.00	0.00	0.00	5.87
5891	7574	0.944311	AAATCACGTCAGCTTCGCGT	60.944	50.000	5.77	4.79	39.59	6.01
5892	7575	1.344942	AATCACGTCAGCTTCGCGTC	61.345	55.000	5.77	0.00	36.67	5.19
5893	7576	3.470567	CACGTCAGCTTCGCGTCC	61.471	66.667	5.77	0.00	36.67	4.79
5922	7605	3.610669	TTTGCGGCCCAAATGCGT	61.611	55.556	13.46	0.00	38.46	5.24
5923	7606	3.565910	TTTGCGGCCCAAATGCGTC	62.566	57.895	13.46	0.00	38.46	5.19
5929	7612	4.459331	CCCAAATGCGTCGGCGTG	62.459	66.667	12.58	0.00	44.10	5.34
5930	7613	4.459331	CCAAATGCGTCGGCGTGG	62.459	66.667	12.58	6.87	44.10	4.94
5931	7614	3.418913	CAAATGCGTCGGCGTGGA	61.419	61.111	12.58	2.18	44.10	4.02
5932	7615	3.419759	AAATGCGTCGGCGTGGAC	61.420	61.111	12.58	0.00	44.10	4.02
5960	7643	4.452733	CCTTCTCGCGGTCCCCAC	62.453	72.222	6.13	0.00	0.00	4.61
5961	7644	4.796231	CTTCTCGCGGTCCCCACG	62.796	72.222	6.13	0.00	0.00	4.94
5968	7651	4.745751	CGGTCCCCACGCGCTTAA	62.746	66.667	5.73	0.00	0.00	1.85
5969	7652	2.124860	GGTCCCCACGCGCTTAAT	60.125	61.111	5.73	0.00	0.00	1.40
5970	7653	1.747745	GGTCCCCACGCGCTTAATT	60.748	57.895	5.73	0.00	0.00	1.40
5971	7654	1.310216	GGTCCCCACGCGCTTAATTT	61.310	55.000	5.73	0.00	0.00	1.82
5972	7655	1.371595	GTCCCCACGCGCTTAATTTA	58.628	50.000	5.73	0.00	0.00	1.40
5973	7656	1.944709	GTCCCCACGCGCTTAATTTAT	59.055	47.619	5.73	0.00	0.00	1.40
5974	7657	1.944024	TCCCCACGCGCTTAATTTATG	59.056	47.619	5.73	0.00	0.00	1.90
5975	7658	1.944024	CCCCACGCGCTTAATTTATGA	59.056	47.619	5.73	0.00	0.00	2.15
5976	7659	2.286772	CCCCACGCGCTTAATTTATGAC	60.287	50.000	5.73	0.00	0.00	3.06
5977	7660	2.286772	CCCACGCGCTTAATTTATGACC	60.287	50.000	5.73	0.00	0.00	4.02
5978	7661	2.353269	CCACGCGCTTAATTTATGACCA	59.647	45.455	5.73	0.00	0.00	4.02
5979	7662	3.350912	CACGCGCTTAATTTATGACCAC	58.649	45.455	5.73	0.00	0.00	4.16
5980	7663	3.063452	CACGCGCTTAATTTATGACCACT	59.937	43.478	5.73	0.00	0.00	4.00
5981	7664	3.063452	ACGCGCTTAATTTATGACCACTG	59.937	43.478	5.73	0.00	0.00	3.66
5982	7665	3.546020	CGCGCTTAATTTATGACCACTGG	60.546	47.826	5.56	0.00	0.00	4.00
5983	7666	3.792124	GCGCTTAATTTATGACCACTGGC	60.792	47.826	0.00	0.00	0.00	4.85
5984	7667	3.243068	CGCTTAATTTATGACCACTGGCC	60.243	47.826	0.00	0.00	0.00	5.36
5985	7668	3.068165	GCTTAATTTATGACCACTGGCCC	59.932	47.826	0.00	0.00	0.00	5.80
5986	7669	2.917713	AATTTATGACCACTGGCCCA	57.082	45.000	0.00	0.00	0.00	5.36
5987	7670	2.143876	ATTTATGACCACTGGCCCAC	57.856	50.000	0.00	0.00	0.00	4.61
5988	7671	0.322098	TTTATGACCACTGGCCCACG	60.322	55.000	0.00	0.00	0.00	4.94
5989	7672	2.813226	TTATGACCACTGGCCCACGC	62.813	60.000	0.00	0.00	0.00	5.34
6012	7695	2.663852	CGACGGCGGTTGTCCTTT	60.664	61.111	13.24	0.00	32.68	3.11
6013	7696	2.248835	CGACGGCGGTTGTCCTTTT	61.249	57.895	13.24	0.00	32.68	2.27
6014	7697	1.778027	CGACGGCGGTTGTCCTTTTT	61.778	55.000	13.24	0.00	32.68	1.94
6029	7712	1.570475	TTTTTAAGCCGACCGTGCG	59.430	52.632	0.00	0.00	0.00	5.34
6046	7729	4.554036	GGCGGGGCTGTCCTCATC	62.554	72.222	0.00	0.00	35.33	2.92
6047	7730	4.554036	GCGGGGCTGTCCTCATCC	62.554	72.222	0.00	0.00	35.33	3.51
6048	7731	3.083349	CGGGGCTGTCCTCATCCA	61.083	66.667	0.00	0.00	32.07	3.41
6049	7732	2.669133	CGGGGCTGTCCTCATCCAA	61.669	63.158	0.00	0.00	32.07	3.53
6050	7733	1.691219	GGGGCTGTCCTCATCCAAA	59.309	57.895	0.00	0.00	32.07	3.28
6051	7734	0.681243	GGGGCTGTCCTCATCCAAAC	60.681	60.000	0.00	0.00	32.07	2.93
6052	7735	0.329596	GGGCTGTCCTCATCCAAACT	59.670	55.000	0.00	0.00	32.07	2.66
6053	7736	1.680249	GGGCTGTCCTCATCCAAACTC	60.680	57.143	0.00	0.00	32.07	3.01
6054	7737	1.363744	GCTGTCCTCATCCAAACTCG	58.636	55.000	0.00	0.00	0.00	4.18
6055	7738	1.363744	CTGTCCTCATCCAAACTCGC	58.636	55.000	0.00	0.00	0.00	5.03
6056	7739	0.036388	TGTCCTCATCCAAACTCGCC	60.036	55.000	0.00	0.00	0.00	5.54
6057	7740	1.084370	GTCCTCATCCAAACTCGCCG	61.084	60.000	0.00	0.00	0.00	6.46
6058	7741	1.079127	CCTCATCCAAACTCGCCGT	60.079	57.895	0.00	0.00	0.00	5.68
6059	7742	1.084370	CCTCATCCAAACTCGCCGTC	61.084	60.000	0.00	0.00	0.00	4.79
6060	7743	1.079405	TCATCCAAACTCGCCGTCC	60.079	57.895	0.00	0.00	0.00	4.79
6061	7744	1.375396	CATCCAAACTCGCCGTCCA	60.375	57.895	0.00	0.00	0.00	4.02
6062	7745	1.375523	ATCCAAACTCGCCGTCCAC	60.376	57.895	0.00	0.00	0.00	4.02
6063	7746	2.107041	ATCCAAACTCGCCGTCCACA	62.107	55.000	0.00	0.00	0.00	4.17
6064	7747	1.671054	CCAAACTCGCCGTCCACAT	60.671	57.895	0.00	0.00	0.00	3.21
6065	7748	1.635663	CCAAACTCGCCGTCCACATC	61.636	60.000	0.00	0.00	0.00	3.06
6066	7749	1.736645	AAACTCGCCGTCCACATCG	60.737	57.895	0.00	0.00	0.00	3.84
6067	7750	2.149803	AAACTCGCCGTCCACATCGA	62.150	55.000	0.00	0.00	0.00	3.59
6068	7751	2.278206	CTCGCCGTCCACATCGAG	60.278	66.667	0.00	0.00	41.66	4.04
6069	7752	4.492160	TCGCCGTCCACATCGAGC	62.492	66.667	0.00	0.00	0.00	5.03
6070	7753	4.794439	CGCCGTCCACATCGAGCA	62.794	66.667	0.00	0.00	0.00	4.26
6071	7754	2.434185	GCCGTCCACATCGAGCAA	60.434	61.111	0.00	0.00	0.00	3.91
6072	7755	2.456119	GCCGTCCACATCGAGCAAG	61.456	63.158	0.00	0.00	0.00	4.01
6073	7756	2.456119	CCGTCCACATCGAGCAAGC	61.456	63.158	0.00	0.00	0.00	4.01
6074	7757	1.446792	CGTCCACATCGAGCAAGCT	60.447	57.895	0.00	0.00	0.00	3.74
6075	7758	1.016130	CGTCCACATCGAGCAAGCTT	61.016	55.000	0.00	0.00	0.00	3.74
6076	7759	1.160137	GTCCACATCGAGCAAGCTTT	58.840	50.000	0.00	0.00	0.00	3.51
6077	7760	1.135859	GTCCACATCGAGCAAGCTTTG	60.136	52.381	0.00	0.00	0.00	2.77
6086	7769	2.282462	CAAGCTTTGCTCCCCCGT	60.282	61.111	0.00	0.00	38.25	5.28
6087	7770	2.034221	AAGCTTTGCTCCCCCGTC	59.966	61.111	0.00	0.00	38.25	4.79
6088	7771	3.901797	AAGCTTTGCTCCCCCGTCG	62.902	63.158	0.00	0.00	38.25	5.12
6100	7783	4.675029	CCGTCGCCGACAAACCCT	62.675	66.667	18.40	0.00	35.63	4.34
6101	7784	2.259204	CGTCGCCGACAAACCCTA	59.741	61.111	18.40	0.00	35.63	3.53
6102	7785	1.804326	CGTCGCCGACAAACCCTAG	60.804	63.158	18.40	0.00	35.63	3.02
6103	7786	2.098831	GTCGCCGACAAACCCTAGC	61.099	63.158	13.23	0.00	32.09	3.42
6104	7787	2.047655	CGCCGACAAACCCTAGCA	60.048	61.111	0.00	0.00	0.00	3.49
6105	7788	1.669760	CGCCGACAAACCCTAGCAA	60.670	57.895	0.00	0.00	0.00	3.91
6106	7789	1.873863	GCCGACAAACCCTAGCAAC	59.126	57.895	0.00	0.00	0.00	4.17
6107	7790	1.583495	GCCGACAAACCCTAGCAACC	61.583	60.000	0.00	0.00	0.00	3.77
6108	7791	0.250553	CCGACAAACCCTAGCAACCA	60.251	55.000	0.00	0.00	0.00	3.67
6109	7792	0.872388	CGACAAACCCTAGCAACCAC	59.128	55.000	0.00	0.00	0.00	4.16
6110	7793	1.244816	GACAAACCCTAGCAACCACC	58.755	55.000	0.00	0.00	0.00	4.61
6111	7794	0.553819	ACAAACCCTAGCAACCACCA	59.446	50.000	0.00	0.00	0.00	4.17
6112	7795	0.958822	CAAACCCTAGCAACCACCAC	59.041	55.000	0.00	0.00	0.00	4.16
6113	7796	0.178973	AAACCCTAGCAACCACCACC	60.179	55.000	0.00	0.00	0.00	4.61
6114	7797	1.357272	AACCCTAGCAACCACCACCA	61.357	55.000	0.00	0.00	0.00	4.17
6115	7798	1.303317	CCCTAGCAACCACCACCAC	60.303	63.158	0.00	0.00	0.00	4.16
6116	7799	1.454104	CCTAGCAACCACCACCACA	59.546	57.895	0.00	0.00	0.00	4.17
6117	7800	0.606401	CCTAGCAACCACCACCACAG	60.606	60.000	0.00	0.00	0.00	3.66
6118	7801	1.228124	TAGCAACCACCACCACAGC	60.228	57.895	0.00	0.00	0.00	4.40
6119	7802	3.964875	GCAACCACCACCACAGCG	61.965	66.667	0.00	0.00	0.00	5.18
6120	7803	2.203139	CAACCACCACCACAGCGA	60.203	61.111	0.00	0.00	0.00	4.93
6121	7804	2.111043	AACCACCACCACAGCGAG	59.889	61.111	0.00	0.00	0.00	5.03
6122	7805	2.439960	AACCACCACCACAGCGAGA	61.440	57.895	0.00	0.00	0.00	4.04
6123	7806	1.768684	AACCACCACCACAGCGAGAT	61.769	55.000	0.00	0.00	0.00	2.75
6124	7807	1.003355	CCACCACCACAGCGAGATT	60.003	57.895	0.00	0.00	0.00	2.40
6125	7808	1.300971	CCACCACCACAGCGAGATTG	61.301	60.000	0.00	0.00	0.00	2.67
6126	7809	0.603707	CACCACCACAGCGAGATTGT	60.604	55.000	0.00	0.00	0.00	2.71
6127	7810	0.603707	ACCACCACAGCGAGATTGTG	60.604	55.000	0.00	0.00	44.25	3.33
6128	7811	0.320683	CCACCACAGCGAGATTGTGA	60.321	55.000	6.93	0.00	46.85	3.58
6129	7812	0.792640	CACCACAGCGAGATTGTGAC	59.207	55.000	6.93	0.00	46.85	3.67
6130	7813	0.667487	ACCACAGCGAGATTGTGACG	60.667	55.000	6.93	0.00	46.85	4.35
6131	7814	1.417592	CACAGCGAGATTGTGACGC	59.582	57.895	0.00	0.00	46.85	5.19
6134	7817	3.554692	GCGAGATTGTGACGCCCG	61.555	66.667	0.00	0.00	45.35	6.13
6135	7818	3.554692	CGAGATTGTGACGCCCGC	61.555	66.667	0.00	0.00	0.00	6.13
6136	7819	2.434185	GAGATTGTGACGCCCGCA	60.434	61.111	0.00	0.00	0.00	5.69
6137	7820	1.815421	GAGATTGTGACGCCCGCAT	60.815	57.895	0.00	0.00	34.88	4.73
6138	7821	0.529773	GAGATTGTGACGCCCGCATA	60.530	55.000	0.00	0.00	34.88	3.14
6139	7822	0.107897	AGATTGTGACGCCCGCATAA	60.108	50.000	0.00	0.00	34.88	1.90
6140	7823	0.944386	GATTGTGACGCCCGCATAAT	59.056	50.000	6.73	6.73	34.88	1.28
6141	7824	1.333619	GATTGTGACGCCCGCATAATT	59.666	47.619	7.84	0.00	34.88	1.40
6142	7825	2.025589	TTGTGACGCCCGCATAATTA	57.974	45.000	0.00	0.00	34.88	1.40
6143	7826	1.577468	TGTGACGCCCGCATAATTAG	58.423	50.000	0.00	0.00	0.00	1.73
6144	7827	0.865769	GTGACGCCCGCATAATTAGG	59.134	55.000	0.00	0.00	0.00	2.69
6145	7828	0.882927	TGACGCCCGCATAATTAGGC	60.883	55.000	12.02	12.02	42.18	3.93
6146	7829	0.602905	GACGCCCGCATAATTAGGCT	60.603	55.000	18.93	0.61	43.48	4.58
6147	7830	0.682852	ACGCCCGCATAATTAGGCTA	59.317	50.000	18.93	0.00	43.48	3.93
6148	7831	1.076332	CGCCCGCATAATTAGGCTAC	58.924	55.000	18.93	7.91	43.48	3.58
6149	7832	1.606994	CGCCCGCATAATTAGGCTACA	60.607	52.381	18.93	0.00	43.48	2.74
6150	7833	2.076863	GCCCGCATAATTAGGCTACAG	58.923	52.381	18.93	4.41	42.34	2.74
6151	7834	2.550208	GCCCGCATAATTAGGCTACAGT	60.550	50.000	18.93	0.00	42.34	3.55
6152	7835	3.306502	GCCCGCATAATTAGGCTACAGTA	60.307	47.826	18.93	0.00	42.34	2.74
6153	7836	4.801581	GCCCGCATAATTAGGCTACAGTAA	60.802	45.833	18.93	0.00	42.34	2.24
6154	7837	5.488341	CCCGCATAATTAGGCTACAGTAAT	58.512	41.667	18.93	0.00	0.00	1.89
6155	7838	5.938125	CCCGCATAATTAGGCTACAGTAATT	59.062	40.000	18.93	0.00	34.13	1.40
6156	7839	6.092259	CCCGCATAATTAGGCTACAGTAATTC	59.908	42.308	18.93	0.00	32.39	2.17
6157	7840	6.092259	CCGCATAATTAGGCTACAGTAATTCC	59.908	42.308	18.93	0.00	32.39	3.01
6158	7841	6.649141	CGCATAATTAGGCTACAGTAATTCCA	59.351	38.462	18.93	0.00	32.39	3.53
6159	7842	7.360101	CGCATAATTAGGCTACAGTAATTCCAC	60.360	40.741	18.93	0.00	32.39	4.02
6160	7843	7.360101	GCATAATTAGGCTACAGTAATTCCACG	60.360	40.741	14.62	0.00	32.39	4.94
6161	7844	5.609533	ATTAGGCTACAGTAATTCCACGT	57.390	39.130	0.00	0.00	0.00	4.49
6162	7845	3.975168	AGGCTACAGTAATTCCACGTT	57.025	42.857	0.00	0.00	0.00	3.99
6163	7846	6.528537	TTAGGCTACAGTAATTCCACGTTA	57.471	37.500	0.00	0.00	0.00	3.18
6164	7847	5.410355	AGGCTACAGTAATTCCACGTTAA	57.590	39.130	0.00	0.00	0.00	2.01
6165	7848	5.173664	AGGCTACAGTAATTCCACGTTAAC	58.826	41.667	0.00	0.00	0.00	2.01
6166	7849	4.032104	GGCTACAGTAATTCCACGTTAACG	59.968	45.833	25.68	25.68	46.33	3.18
6167	7850	4.858692	GCTACAGTAATTCCACGTTAACGA	59.141	41.667	33.06	12.27	43.02	3.85
6168	7851	5.517770	GCTACAGTAATTCCACGTTAACGAT	59.482	40.000	33.06	14.09	43.02	3.73
6169	7852	5.773239	ACAGTAATTCCACGTTAACGATG	57.227	39.130	33.06	24.21	43.02	3.84
6170	7853	4.092383	ACAGTAATTCCACGTTAACGATGC	59.908	41.667	33.06	14.45	43.02	3.91
6171	7854	3.619929	AGTAATTCCACGTTAACGATGCC	59.380	43.478	33.06	12.21	43.02	4.40
6172	7855	2.102070	ATTCCACGTTAACGATGCCA	57.898	45.000	33.06	15.63	43.02	4.92
6173	7856	1.434555	TTCCACGTTAACGATGCCAG	58.565	50.000	33.06	14.35	43.02	4.85
6174	7857	0.390603	TCCACGTTAACGATGCCAGG	60.391	55.000	33.06	21.41	43.02	4.45
6175	7858	0.672401	CCACGTTAACGATGCCAGGT	60.672	55.000	33.06	6.33	43.02	4.00
6176	7859	0.719465	CACGTTAACGATGCCAGGTC	59.281	55.000	33.06	0.00	43.02	3.85
6177	7860	0.319083	ACGTTAACGATGCCAGGTCA	59.681	50.000	33.06	0.00	43.02	4.02
6178	7861	0.719465	CGTTAACGATGCCAGGTCAC	59.281	55.000	23.35	0.00	43.02	3.67
6179	7862	1.084289	GTTAACGATGCCAGGTCACC	58.916	55.000	0.00	0.00	0.00	4.02
6180	7863	0.981183	TTAACGATGCCAGGTCACCT	59.019	50.000	0.00	0.00	0.00	4.00
6181	7864	0.535335	TAACGATGCCAGGTCACCTC	59.465	55.000	0.00	0.00	0.00	3.85
6182	7865	2.202797	CGATGCCAGGTCACCTCG	60.203	66.667	0.00	0.00	0.00	4.63
6183	7866	2.187946	GATGCCAGGTCACCTCGG	59.812	66.667	0.00	0.00	0.00	4.63
6184	7867	2.607750	ATGCCAGGTCACCTCGGT	60.608	61.111	12.41	0.00	0.00	4.69
6185	7868	2.185310	GATGCCAGGTCACCTCGGTT	62.185	60.000	12.41	3.03	0.00	4.44
6186	7869	0.907704	ATGCCAGGTCACCTCGGTTA	60.908	55.000	12.41	4.71	0.00	2.85
6187	7870	1.079336	GCCAGGTCACCTCGGTTAC	60.079	63.158	12.41	0.00	0.00	2.50
6188	7871	1.542187	GCCAGGTCACCTCGGTTACT	61.542	60.000	12.41	0.00	0.00	2.24
6189	7872	0.246635	CCAGGTCACCTCGGTTACTG	59.753	60.000	0.00	3.26	0.00	2.74
6190	7873	0.966920	CAGGTCACCTCGGTTACTGT	59.033	55.000	0.00	0.00	0.00	3.55
6191	7874	1.343465	CAGGTCACCTCGGTTACTGTT	59.657	52.381	0.00	0.00	0.00	3.16
6192	7875	1.343465	AGGTCACCTCGGTTACTGTTG	59.657	52.381	0.00	0.00	0.00	3.33
6193	7876	1.145803	GTCACCTCGGTTACTGTTGC	58.854	55.000	0.00	0.00	0.00	4.17
6194	7877	1.045407	TCACCTCGGTTACTGTTGCT	58.955	50.000	0.00	0.00	0.00	3.91
6195	7878	2.029649	GTCACCTCGGTTACTGTTGCTA	60.030	50.000	0.00	0.00	0.00	3.49
6196	7879	2.629137	TCACCTCGGTTACTGTTGCTAA	59.371	45.455	0.00	0.00	0.00	3.09
6197	7880	3.259876	TCACCTCGGTTACTGTTGCTAAT	59.740	43.478	0.00	0.00	0.00	1.73
6198	7881	3.617263	CACCTCGGTTACTGTTGCTAATC	59.383	47.826	0.00	0.00	0.00	1.75
6199	7882	3.514309	ACCTCGGTTACTGTTGCTAATCT	59.486	43.478	0.00	0.00	0.00	2.40
6200	7883	4.113354	CCTCGGTTACTGTTGCTAATCTC	58.887	47.826	0.00	0.00	0.00	2.75
6201	7884	3.766151	TCGGTTACTGTTGCTAATCTCG	58.234	45.455	0.00	0.00	0.00	4.04
6202	7885	2.281762	CGGTTACTGTTGCTAATCTCGC	59.718	50.000	0.00	0.00	0.00	5.03
6203	7886	2.281762	GGTTACTGTTGCTAATCTCGCG	59.718	50.000	0.00	0.00	0.00	5.87
6204	7887	2.921754	GTTACTGTTGCTAATCTCGCGT	59.078	45.455	5.77	0.00	0.00	6.01
6205	7888	2.080286	ACTGTTGCTAATCTCGCGTT	57.920	45.000	5.77	0.00	0.00	4.84
6206	7889	1.726791	ACTGTTGCTAATCTCGCGTTG	59.273	47.619	5.77	0.00	0.00	4.10
6207	7890	1.061131	CTGTTGCTAATCTCGCGTTGG	59.939	52.381	5.77	0.00	0.00	3.77
6208	7891	1.337354	TGTTGCTAATCTCGCGTTGGA	60.337	47.619	5.77	3.68	0.00	3.53
6209	7892	1.933853	GTTGCTAATCTCGCGTTGGAT	59.066	47.619	5.77	6.09	0.00	3.41
6210	7893	1.852942	TGCTAATCTCGCGTTGGATC	58.147	50.000	5.77	0.00	0.00	3.36
6211	7894	1.136110	TGCTAATCTCGCGTTGGATCA	59.864	47.619	5.77	1.28	0.00	2.92
6212	7895	2.201732	GCTAATCTCGCGTTGGATCAA	58.798	47.619	5.77	1.09	0.00	2.57
6213	7896	2.607635	GCTAATCTCGCGTTGGATCAAA	59.392	45.455	5.77	0.00	0.00	2.69
6214	7897	3.063452	GCTAATCTCGCGTTGGATCAAAA	59.937	43.478	5.77	0.00	0.00	2.44
6215	7898	3.471495	AATCTCGCGTTGGATCAAAAC	57.529	42.857	5.77	0.00	0.00	2.43
6224	7907	5.688348	CGTTGGATCAAAACGTTTCAAAA	57.312	34.783	15.01	0.60	44.07	2.44
6225	7908	6.267500	CGTTGGATCAAAACGTTTCAAAAT	57.733	33.333	15.01	5.63	44.07	1.82
6226	7909	6.344032	CGTTGGATCAAAACGTTTCAAAATC	58.656	36.000	15.01	13.51	44.07	2.17
6227	7910	6.020281	CGTTGGATCAAAACGTTTCAAAATCA	60.020	34.615	15.01	6.43	44.07	2.57
6228	7911	7.463383	CGTTGGATCAAAACGTTTCAAAATCAA	60.463	33.333	15.01	11.67	44.07	2.57
6229	7912	7.834068	TGGATCAAAACGTTTCAAAATCAAA	57.166	28.000	15.01	5.13	0.00	2.69
6230	7913	8.430801	TGGATCAAAACGTTTCAAAATCAAAT	57.569	26.923	15.01	0.00	0.00	2.32
6231	7914	8.887717	TGGATCAAAACGTTTCAAAATCAAATT	58.112	25.926	15.01	0.00	0.00	1.82
6232	7915	9.715123	GGATCAAAACGTTTCAAAATCAAATTT	57.285	25.926	15.01	0.00	0.00	1.82
6285	7968	9.534565	TCAAATATCAAAACAAAAATGTTCGGA	57.465	25.926	0.00	0.00	0.00	4.55
6289	7972	7.784633	ATCAAAACAAAAATGTTCGGAATGT	57.215	28.000	0.00	0.00	0.00	2.71
6290	7973	6.998338	TCAAAACAAAAATGTTCGGAATGTG	58.002	32.000	0.00	0.00	0.00	3.21
6292	7975	6.582437	AAACAAAAATGTTCGGAATGTGAC	57.418	33.333	0.00	0.00	0.00	3.67
6293	7976	5.255710	ACAAAAATGTTCGGAATGTGACA	57.744	34.783	0.00	0.00	0.00	3.58
6294	7977	5.841810	ACAAAAATGTTCGGAATGTGACAT	58.158	33.333	0.00	0.00	34.41	3.06
6296	7979	7.429633	ACAAAAATGTTCGGAATGTGACATAA	58.570	30.769	0.00	0.00	32.77	1.90
6298	7981	8.924691	CAAAAATGTTCGGAATGTGACATAATT	58.075	29.630	0.00	0.00	32.77	1.40
6300	7983	9.787532	AAAATGTTCGGAATGTGACATAATTAG	57.212	29.630	0.00	0.00	32.77	1.73
6301	7984	6.918892	TGTTCGGAATGTGACATAATTAGG	57.081	37.500	0.00	0.00	0.00	2.69
6302	7985	6.411376	TGTTCGGAATGTGACATAATTAGGT	58.589	36.000	1.70	1.70	0.00	3.08
6307	7990	8.262227	TCGGAATGTGACATAATTAGGTTTACT	58.738	33.333	3.99	0.00	0.00	2.24
6318	8001	9.821662	CATAATTAGGTTTACTAAATTAGGCGC	57.178	33.333	0.00	0.00	44.39	6.53
6319	8002	7.868906	AATTAGGTTTACTAAATTAGGCGCA	57.131	32.000	10.83	0.00	44.39	6.09

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
11	12	2.889045	GACTAGGTGGTGACTGTGTGTA	59.111	50.000	0.00	0.00	0.00	2.90
12	13	1.687123	GACTAGGTGGTGACTGTGTGT	59.313	52.381	0.00	0.00	0.00	3.72
35	36	3.153270	TAGTTCGCCCACACGTGCA	62.153	57.895	17.22	0.00	0.00	4.57
38	39	1.751349	AAGGTAGTTCGCCCACACGT	61.751	55.000	0.00	0.00	0.00	4.49
55	56	2.051345	GCGTCGTGTGGGCAAAAG	60.051	61.111	0.00	0.00	0.00	2.27
112	113	6.350103	TGTCATGTGTGTTTACCTAGTTGAA	58.650	36.000	0.00	0.00	0.00	2.69
113	114	5.919755	TGTCATGTGTGTTTACCTAGTTGA	58.080	37.500	0.00	0.00	0.00	3.18
164	165	0.102663	TGCCACGTACACGAAACTGA	59.897	50.000	9.04	0.00	43.02	3.41
170	171	0.599060	TCTGATTGCCACGTACACGA	59.401	50.000	9.04	0.00	43.02	4.35
173	174	4.390603	GTGTTTATCTGATTGCCACGTACA	59.609	41.667	0.00	0.00	0.00	2.90
185	186	6.018016	CACAGTTGTCATGTGTGTTTATCTGA	60.018	38.462	5.46	0.00	42.47	3.27
225	226	7.518697	GTCATGTGTGATCCAACCATAGTTGT	61.519	42.308	3.31	0.00	43.05	3.32
249	250	4.779489	ACTTTAGTTACCCGGGATAGTTGT	59.221	41.667	32.02	12.89	0.00	3.32
299	302	5.605534	GCATGGCAACTCTCTCTATTTAGA	58.394	41.667	0.00	0.00	37.61	2.10
301	304	4.141937	ACGCATGGCAACTCTCTCTATTTA	60.142	41.667	0.00	0.00	37.61	1.40
323	326	6.316890	TCCGGGTTGCAAATCTAGTTATAAAC	59.683	38.462	0.00	0.00	0.00	2.01
341	344	3.244981	TGGCAACTTTAGTTATCCGGGTT	60.245	43.478	0.00	0.00	36.32	4.11
343	346	2.993937	TGGCAACTTTAGTTATCCGGG	58.006	47.619	0.00	0.00	36.32	5.73
346	349	4.532834	TGGGATGGCAACTTTAGTTATCC	58.467	43.478	11.81	11.81	38.79	2.59
372	375	4.529377	TCCGTGGGAAGACACTTTAGTTAT	59.471	41.667	0.00	0.00	39.19	1.89
391	394	1.895131	ACACCTACGTTGGTTATCCGT	59.105	47.619	19.40	10.79	38.45	4.69
395	399	1.673626	CGGCACACCTACGTTGGTTAT	60.674	52.381	19.40	7.87	38.45	1.89
400	404	2.515996	ATCCCGGCACACCTACGTTG	62.516	60.000	0.00	0.00	0.00	4.10
415	419	1.721487	CAAATCCGTCGCACATCCC	59.279	57.895	0.00	0.00	0.00	3.85
423	427	3.081133	CACGAGGCAAATCCGTCG	58.919	61.111	0.00	3.17	40.77	5.12
427	432	2.032634	TGTCGCACGAGGCAAATCC	61.033	57.895	0.00	0.00	45.17	3.01
483	488	1.427819	CGCAACTATTTCGTGCCCC	59.572	57.895	0.00	0.00	0.00	5.80
484	489	1.226295	GCGCAACTATTTCGTGCCC	60.226	57.895	0.30	0.00	0.00	5.36
577	582	2.165641	TCTTAGACATACGCCCACACAG	59.834	50.000	0.00	0.00	0.00	3.66
578	583	2.172679	TCTTAGACATACGCCCACACA	58.827	47.619	0.00	0.00	0.00	3.72
588	593	4.142249	CCCACGTGTGACATCTTAGACATA	60.142	45.833	15.65	0.00	0.00	2.29
601	606	0.179094	GATATTCGCCCCACGTGTGA	60.179	55.000	15.65	3.89	44.19	3.58
610	615	0.249911	AAGAGTGCCGATATTCGCCC	60.250	55.000	0.00	0.00	38.82	6.13
613	618	6.345920	ACTTAAAAAGAGTGCCGATATTCG	57.654	37.500	0.00	0.00	40.07	3.34
623	628	8.892905	GCTCGTTTCATTAACTTAAAAAGAGTG	58.107	33.333	9.98	0.00	38.57	3.51
637	642	9.647797	TGACTTCTAATAAAGCTCGTTTCATTA	57.352	29.630	0.00	0.00	0.00	1.90
638	643	8.547967	TGACTTCTAATAAAGCTCGTTTCATT	57.452	30.769	0.00	0.00	0.00	2.57
639	644	8.723942	ATGACTTCTAATAAAGCTCGTTTCAT	57.276	30.769	0.00	0.00	0.00	2.57
640	645	7.277981	GGATGACTTCTAATAAAGCTCGTTTCA	59.722	37.037	0.00	0.00	0.00	2.69
641	646	7.254488	GGGATGACTTCTAATAAAGCTCGTTTC	60.254	40.741	0.00	0.00	0.00	2.78
642	647	6.539103	GGGATGACTTCTAATAAAGCTCGTTT	59.461	38.462	0.00	0.00	0.00	3.60
643	648	6.049790	GGGATGACTTCTAATAAAGCTCGTT	58.950	40.000	0.00	0.00	0.00	3.85
644	649	5.128827	TGGGATGACTTCTAATAAAGCTCGT	59.871	40.000	0.00	0.00	0.00	4.18
645	650	5.463724	GTGGGATGACTTCTAATAAAGCTCG	59.536	44.000	0.00	0.00	0.00	5.03
646	651	5.463724	CGTGGGATGACTTCTAATAAAGCTC	59.536	44.000	0.00	0.00	0.00	4.09
647	652	5.360591	CGTGGGATGACTTCTAATAAAGCT	58.639	41.667	0.00	0.00	0.00	3.74
648	653	4.511826	CCGTGGGATGACTTCTAATAAAGC	59.488	45.833	0.00	0.00	0.00	3.51
649	654	5.671493	ACCGTGGGATGACTTCTAATAAAG	58.329	41.667	0.00	0.00	0.00	1.85
650	655	5.424252	AGACCGTGGGATGACTTCTAATAAA	59.576	40.000	0.00	0.00	0.00	1.40
651	656	4.960469	AGACCGTGGGATGACTTCTAATAA	59.040	41.667	0.00	0.00	0.00	1.40
652	657	4.543689	AGACCGTGGGATGACTTCTAATA	58.456	43.478	0.00	0.00	0.00	0.98
653	658	3.375699	AGACCGTGGGATGACTTCTAAT	58.624	45.455	0.00	0.00	0.00	1.73
654	659	2.758979	GAGACCGTGGGATGACTTCTAA	59.241	50.000	0.00	0.00	0.00	2.10
655	660	2.376109	GAGACCGTGGGATGACTTCTA	58.624	52.381	0.00	0.00	0.00	2.10
656	661	1.187087	GAGACCGTGGGATGACTTCT	58.813	55.000	0.00	0.00	0.00	2.85
672	677	7.619698	TGAATTTGTGAGGAAGTATAGAGGAGA	59.380	37.037	0.00	0.00	0.00	3.71
680	685	4.935808	GTCCGTGAATTTGTGAGGAAGTAT	59.064	41.667	0.00	0.00	0.00	2.12
682	687	3.139077	GTCCGTGAATTTGTGAGGAAGT	58.861	45.455	0.00	0.00	0.00	3.01
688	693	2.875933	GGAACTGTCCGTGAATTTGTGA	59.124	45.455	0.00	0.00	33.05	3.58
689	694	3.268013	GGAACTGTCCGTGAATTTGTG	57.732	47.619	0.00	0.00	33.05	3.33
745	750	3.452755	TTCACATATCCACACGCCTAG	57.547	47.619	0.00	0.00	0.00	3.02
802	807	1.603455	CGGCCATTGTTCCTGTGGT	60.603	57.895	2.24	0.00	35.44	4.16
805	810	1.671054	CGACGGCCATTGTTCCTGT	60.671	57.895	2.24	0.00	0.00	4.00
815	820	1.064357	GAAAAGTTGAAACGACGGCCA	59.936	47.619	2.24	0.00	0.00	5.36
818	823	3.311596	AGGAAGAAAAGTTGAAACGACGG	59.688	43.478	0.00	0.00	0.00	4.79
820	825	5.479716	TCAGGAAGAAAAGTTGAAACGAC	57.520	39.130	0.00	0.00	0.00	4.34
821	826	4.035208	GCTCAGGAAGAAAAGTTGAAACGA	59.965	41.667	0.00	0.00	0.00	3.85
871	877	2.260822	TGGAGTGAAGAGAGGGAAAGG	58.739	52.381	0.00	0.00	0.00	3.11
900	906	4.556697	GGAAATTGAATAGGGTGGGGATT	58.443	43.478	0.00	0.00	0.00	3.01
970	976	0.042731	AATCTGGTTCGAGGGGGAGA	59.957	55.000	0.00	0.00	0.00	3.71
1518	1524	0.837691	TGGCAAGCCTCTTCTCCTCA	60.838	55.000	12.96	0.00	36.94	3.86
1803	1809	3.607777	CGAGTAGCGGACAACTCTC	57.392	57.895	0.00	0.00	40.00	3.20
1956	1962	3.009143	GGATCTCCACAAACCCACTACTT	59.991	47.826	0.00	0.00	35.64	2.24
2025	2031	5.368989	GGTGTCAGGAATATTACCTTGGAG	58.631	45.833	0.00	0.00	35.35	3.86
2147	2154	1.117150	GCCGACTAACCATACTCCCA	58.883	55.000	0.00	0.00	0.00	4.37
2241	2252	1.135315	CAAAATCACTCAGCGGCCG	59.865	57.895	24.05	24.05	0.00	6.13
2352	2363	8.773404	ATACTAACAACCAAACAGATGTAGTC	57.227	34.615	0.00	0.00	0.00	2.59
2828	2857	1.512156	ATCGGTTGCAACGTGTTCCC	61.512	55.000	22.67	6.71	0.00	3.97
2833	2862	0.110238	CAGGAATCGGTTGCAACGTG	60.110	55.000	22.67	17.34	0.00	4.49
2836	2865	1.130561	GCTACAGGAATCGGTTGCAAC	59.869	52.381	21.59	21.59	38.90	4.17
2853	2882	1.667830	GATAGCCCGCGCATTGCTA	60.668	57.895	20.35	20.35	43.27	3.49
2959	2988	9.406828	CAACTAAGATCAATCATATGCCAAATG	57.593	33.333	0.00	0.00	0.00	2.32
3059	3088	7.375053	TCCAGCCAACAATAAAAATAACAGTC	58.625	34.615	0.00	0.00	0.00	3.51
3111	3149	6.851222	TGAGAACAAAATGAGACAAGAGTC	57.149	37.500	0.00	0.00	45.31	3.36
3112	3150	6.429385	GGATGAGAACAAAATGAGACAAGAGT	59.571	38.462	0.00	0.00	0.00	3.24
3113	3151	6.654161	AGGATGAGAACAAAATGAGACAAGAG	59.346	38.462	0.00	0.00	0.00	2.85
3114	3152	6.537355	AGGATGAGAACAAAATGAGACAAGA	58.463	36.000	0.00	0.00	0.00	3.02
3115	3153	6.814506	AGGATGAGAACAAAATGAGACAAG	57.185	37.500	0.00	0.00	0.00	3.16
3116	3154	6.547141	ACAAGGATGAGAACAAAATGAGACAA	59.453	34.615	0.00	0.00	0.00	3.18
3117	3155	6.064060	ACAAGGATGAGAACAAAATGAGACA	58.936	36.000	0.00	0.00	0.00	3.41
3118	3156	6.566197	ACAAGGATGAGAACAAAATGAGAC	57.434	37.500	0.00	0.00	0.00	3.36
3119	3157	7.719193	TGTTACAAGGATGAGAACAAAATGAGA	59.281	33.333	0.00	0.00	34.94	3.27
3200	3239	9.606631	AGACAGAAAGAATATCACATTTACCTC	57.393	33.333	0.00	0.00	0.00	3.85
3286	3326	9.787435	CTGTAAACTGAGAGAGAGGTAGTATAT	57.213	37.037	0.00	0.00	0.00	0.86
3287	3327	8.212312	CCTGTAAACTGAGAGAGAGGTAGTATA	58.788	40.741	0.00	0.00	0.00	1.47
3288	3328	7.057894	CCTGTAAACTGAGAGAGAGGTAGTAT	58.942	42.308	0.00	0.00	0.00	2.12
3289	3329	6.416415	CCTGTAAACTGAGAGAGAGGTAGTA	58.584	44.000	0.00	0.00	0.00	1.82
3290	3330	5.258051	CCTGTAAACTGAGAGAGAGGTAGT	58.742	45.833	0.00	0.00	0.00	2.73
3291	3331	4.642885	CCCTGTAAACTGAGAGAGAGGTAG	59.357	50.000	0.00	0.00	0.00	3.18
3292	3332	4.601084	CCCTGTAAACTGAGAGAGAGGTA	58.399	47.826	0.00	0.00	0.00	3.08
3293	3333	3.436243	CCCTGTAAACTGAGAGAGAGGT	58.564	50.000	0.00	0.00	0.00	3.85
3294	3334	2.167487	GCCCTGTAAACTGAGAGAGAGG	59.833	54.545	0.00	0.00	0.00	3.69
3295	3335	2.159310	CGCCCTGTAAACTGAGAGAGAG	60.159	54.545	0.00	0.00	0.00	3.20
3296	3336	1.819288	CGCCCTGTAAACTGAGAGAGA	59.181	52.381	0.00	0.00	0.00	3.10
3297	3337	1.546476	ACGCCCTGTAAACTGAGAGAG	59.454	52.381	0.00	0.00	0.00	3.20
3298	3338	1.272490	CACGCCCTGTAAACTGAGAGA	59.728	52.381	0.00	0.00	0.00	3.10
3299	3339	1.714794	CACGCCCTGTAAACTGAGAG	58.285	55.000	0.00	0.00	0.00	3.20
3300	3340	0.320421	GCACGCCCTGTAAACTGAGA	60.320	55.000	0.00	0.00	0.00	3.27
3301	3341	1.626654	CGCACGCCCTGTAAACTGAG	61.627	60.000	0.00	0.00	0.00	3.35
3302	3342	1.666553	CGCACGCCCTGTAAACTGA	60.667	57.895	0.00	0.00	0.00	3.41
3303	3343	2.860293	CGCACGCCCTGTAAACTG	59.140	61.111	0.00	0.00	0.00	3.16
3304	3344	3.047877	GCGCACGCCCTGTAAACT	61.048	61.111	0.30	0.00	34.56	2.66
3305	3345	4.439472	CGCGCACGCCCTGTAAAC	62.439	66.667	8.75	0.00	37.98	2.01
3306	3346	3.570621	TACGCGCACGCCCTGTAAA	62.571	57.895	5.73	0.00	45.53	2.01
3307	3347	4.053526	TACGCGCACGCCCTGTAA	62.054	61.111	5.73	0.00	45.53	2.41
3308	3348	4.781959	GTACGCGCACGCCCTGTA	62.782	66.667	5.73	3.39	45.53	2.74
3322	3362	4.916984	GTCAAATTGACGACCTAGGGGTAC	60.917	50.000	14.81	2.61	40.90	3.34
3323	3363	3.196254	GTCAAATTGACGACCTAGGGGTA	59.804	47.826	14.81	0.00	40.90	3.69
3324	3364	2.027469	GTCAAATTGACGACCTAGGGGT	60.027	50.000	14.81	10.74	42.37	4.95
3325	3365	2.629051	GTCAAATTGACGACCTAGGGG	58.371	52.381	14.81	7.16	37.67	4.79
3335	3375	7.882179	ACTTGTATTAGGTTGGTCAAATTGAC	58.118	34.615	17.16	17.16	46.23	3.18
3336	3376	8.472007	AACTTGTATTAGGTTGGTCAAATTGA	57.528	30.769	0.00	0.00	0.00	2.57
3389	3429	8.251026	CCTTTTGAAAGTAGAAACTCCAAAGTT	58.749	33.333	3.09	0.00	39.62	2.66
3390	3430	7.396339	ACCTTTTGAAAGTAGAAACTCCAAAGT	59.604	33.333	3.09	0.00	33.75	2.66
3391	3431	7.772166	ACCTTTTGAAAGTAGAAACTCCAAAG	58.228	34.615	3.09	0.00	33.75	2.77
3392	3432	7.712204	ACCTTTTGAAAGTAGAAACTCCAAA	57.288	32.000	3.09	0.00	33.75	3.28
3393	3433	8.990163	ATACCTTTTGAAAGTAGAAACTCCAA	57.010	30.769	3.09	0.00	33.75	3.53
3439	3479	9.084533	GGTTGCCAATTTTATCACCCTAATATA	57.915	33.333	0.00	0.00	0.00	0.86
3440	3480	7.789349	AGGTTGCCAATTTTATCACCCTAATAT	59.211	33.333	0.00	0.00	0.00	1.28
3441	3481	7.129425	AGGTTGCCAATTTTATCACCCTAATA	58.871	34.615	0.00	0.00	0.00	0.98
3442	3482	5.963865	AGGTTGCCAATTTTATCACCCTAAT	59.036	36.000	0.00	0.00	0.00	1.73
3443	3483	5.337788	AGGTTGCCAATTTTATCACCCTAA	58.662	37.500	0.00	0.00	0.00	2.69
3444	3484	4.941713	AGGTTGCCAATTTTATCACCCTA	58.058	39.130	0.00	0.00	0.00	3.53
3445	3485	3.790126	AGGTTGCCAATTTTATCACCCT	58.210	40.909	0.00	0.00	0.00	4.34
3446	3486	4.439563	CGTAGGTTGCCAATTTTATCACCC	60.440	45.833	0.00	0.00	0.00	4.61
3447	3487	4.157105	ACGTAGGTTGCCAATTTTATCACC	59.843	41.667	0.00	0.00	0.00	4.02
3448	3488	5.305139	ACGTAGGTTGCCAATTTTATCAC	57.695	39.130	0.00	0.00	0.00	3.06
3449	3489	7.042590	CGTATACGTAGGTTGCCAATTTTATCA	60.043	37.037	17.16	0.00	34.11	2.15
3450	3490	7.285788	CGTATACGTAGGTTGCCAATTTTATC	58.714	38.462	17.16	0.00	34.11	1.75
3451	3491	6.293027	GCGTATACGTAGGTTGCCAATTTTAT	60.293	38.462	25.04	0.00	42.22	1.40
3452	3492	5.006552	GCGTATACGTAGGTTGCCAATTTTA	59.993	40.000	25.04	0.00	42.22	1.52
3453	3493	4.201841	GCGTATACGTAGGTTGCCAATTTT	60.202	41.667	25.04	0.00	42.22	1.82
3454	3494	3.310501	GCGTATACGTAGGTTGCCAATTT	59.689	43.478	25.04	0.00	42.22	1.82
3455	3495	2.867975	GCGTATACGTAGGTTGCCAATT	59.132	45.455	25.04	0.00	42.22	2.32
3456	3496	2.476821	GCGTATACGTAGGTTGCCAAT	58.523	47.619	25.04	0.00	42.22	3.16
3457	3497	1.798446	CGCGTATACGTAGGTTGCCAA	60.798	52.381	25.04	0.00	42.22	4.52
3458	3498	0.248580	CGCGTATACGTAGGTTGCCA	60.249	55.000	25.04	0.00	42.22	4.92
3459	3499	0.248621	ACGCGTATACGTAGGTTGCC	60.249	55.000	25.04	6.21	46.19	4.52
3460	3500	2.383298	TACGCGTATACGTAGGTTGC	57.617	50.000	25.04	6.84	46.19	4.17
3466	3506	3.194861	ACAAGTCCTACGCGTATACGTA	58.805	45.455	25.04	10.74	46.19	3.57
3468	3508	2.744787	ACAAGTCCTACGCGTATACG	57.255	50.000	20.91	20.87	43.27	3.06
3469	3509	5.453587	CAGTTTACAAGTCCTACGCGTATAC	59.546	44.000	20.91	19.74	0.00	1.47
3470	3510	5.353956	TCAGTTTACAAGTCCTACGCGTATA	59.646	40.000	20.91	8.44	0.00	1.47
3471	3511	4.156556	TCAGTTTACAAGTCCTACGCGTAT	59.843	41.667	20.91	5.41	0.00	3.06
3472	3512	3.501828	TCAGTTTACAAGTCCTACGCGTA	59.498	43.478	19.40	19.40	0.00	4.42
3473	3513	2.294233	TCAGTTTACAAGTCCTACGCGT	59.706	45.455	19.17	19.17	0.00	6.01
3474	3514	2.937591	TCAGTTTACAAGTCCTACGCG	58.062	47.619	3.53	3.53	0.00	6.01
3475	3515	4.375706	CGTTTCAGTTTACAAGTCCTACGC	60.376	45.833	0.00	0.00	0.00	4.42
3476	3516	4.149396	CCGTTTCAGTTTACAAGTCCTACG	59.851	45.833	0.00	0.00	0.00	3.51
3477	3517	5.291971	TCCGTTTCAGTTTACAAGTCCTAC	58.708	41.667	0.00	0.00	0.00	3.18
3478	3518	5.510179	CCTCCGTTTCAGTTTACAAGTCCTA	60.510	44.000	0.00	0.00	0.00	2.94
3479	3519	4.377897	CTCCGTTTCAGTTTACAAGTCCT	58.622	43.478	0.00	0.00	0.00	3.85
3480	3520	3.497262	CCTCCGTTTCAGTTTACAAGTCC	59.503	47.826	0.00	0.00	0.00	3.85
3481	3521	4.124970	ACCTCCGTTTCAGTTTACAAGTC	58.875	43.478	0.00	0.00	0.00	3.01
3482	3522	4.146745	ACCTCCGTTTCAGTTTACAAGT	57.853	40.909	0.00	0.00	0.00	3.16
3483	3523	5.295152	ACTACCTCCGTTTCAGTTTACAAG	58.705	41.667	0.00	0.00	0.00	3.16
3484	3524	5.280654	ACTACCTCCGTTTCAGTTTACAA	57.719	39.130	0.00	0.00	0.00	2.41
3485	3525	4.942761	ACTACCTCCGTTTCAGTTTACA	57.057	40.909	0.00	0.00	0.00	2.41
3486	3526	5.772521	TGTACTACCTCCGTTTCAGTTTAC	58.227	41.667	0.00	0.00	0.00	2.01
3487	3527	5.536161	ACTGTACTACCTCCGTTTCAGTTTA	59.464	40.000	0.00	0.00	32.15	2.01
3488	3528	4.343239	ACTGTACTACCTCCGTTTCAGTTT	59.657	41.667	0.00	0.00	32.15	2.66
3489	3529	3.893813	ACTGTACTACCTCCGTTTCAGTT	59.106	43.478	0.00	0.00	32.15	3.16
3490	3530	3.494332	ACTGTACTACCTCCGTTTCAGT	58.506	45.455	0.00	0.00	0.00	3.41
3491	3531	5.579718	CATACTGTACTACCTCCGTTTCAG	58.420	45.833	0.00	0.00	0.00	3.02
3492	3532	4.142315	GCATACTGTACTACCTCCGTTTCA	60.142	45.833	0.00	0.00	0.00	2.69
3493	3533	4.142315	TGCATACTGTACTACCTCCGTTTC	60.142	45.833	0.00	0.00	0.00	2.78
3494	3534	3.765511	TGCATACTGTACTACCTCCGTTT	59.234	43.478	0.00	0.00	0.00	3.60
3495	3535	3.359033	TGCATACTGTACTACCTCCGTT	58.641	45.455	0.00	0.00	0.00	4.44
3496	3536	3.008835	TGCATACTGTACTACCTCCGT	57.991	47.619	0.00	0.00	0.00	4.69
3497	3537	4.585955	ATTGCATACTGTACTACCTCCG	57.414	45.455	0.00	0.00	0.00	4.63
3498	3538	9.991906	TTATTTATTGCATACTGTACTACCTCC	57.008	33.333	0.00	0.00	0.00	4.30
3581	3621	0.947244	AATAATAGCAGCGTGCCAGC	59.053	50.000	6.39	0.00	46.52	4.85
3582	3622	3.313526	AGAAAATAATAGCAGCGTGCCAG	59.686	43.478	6.39	0.00	46.52	4.85
3583	3623	3.278574	AGAAAATAATAGCAGCGTGCCA	58.721	40.909	6.39	0.00	46.52	4.92
3584	3624	3.971032	AGAAAATAATAGCAGCGTGCC	57.029	42.857	6.39	0.00	46.52	5.01
3585	3625	9.612620	ATTTTATAGAAAATAATAGCAGCGTGC	57.387	29.630	6.27	2.28	42.29	5.34
3588	3628	9.478019	CCGATTTTATAGAAAATAATAGCAGCG	57.522	33.333	8.00	5.34	43.76	5.18
3756	3804	9.802039	ACTATCAAGAATAACCAGGTTTACAAA	57.198	29.630	11.02	0.00	0.00	2.83
4005	4054	6.065374	TGCTTGTAGGAAACATTTGTCCTAA	58.935	36.000	0.00	0.00	45.85	2.69
4062	4111	7.121611	TCTCGGTTTCAACAGATACTACATACA	59.878	37.037	0.00	0.00	32.84	2.29
4078	4127	5.654603	ACACATACATACTCTCGGTTTCA	57.345	39.130	0.00	0.00	0.00	2.69
4161	4210	9.988350	CGTAACAAAGAGCATACTCAAAATATT	57.012	29.630	0.00	0.00	46.09	1.28
4164	4213	7.435068	ACGTAACAAAGAGCATACTCAAAAT	57.565	32.000	0.00	0.00	46.09	1.82
4362	4411	2.514160	GGGAAAATCCATCCTACCACCT	59.486	50.000	0.00	0.00	38.64	4.00
4519	5766	4.603131	ACACCATGAATTTATCAGCAGGT	58.397	39.130	0.00	0.00	42.53	4.00
4839	6313	9.872721	ATATGAATAAATTGTGTGCAAACATGA	57.127	25.926	11.33	0.00	38.21	3.07
5094	6597	0.111061	TCTCTGCAGCATGGTTTGGT	59.889	50.000	9.47	0.00	35.86	3.67
5280	6783	2.486636	TAACTGGCGTGACAGGCTCG	62.487	60.000	18.76	12.43	42.75	5.03
5413	6916	9.233232	GTCAATTTAACTTTTTACAGAGTGTGG	57.767	33.333	0.00	0.00	0.00	4.17
5436	6939	3.130869	AGAAAATGTGCAGCAAACAGTCA	59.869	39.130	0.00	0.00	0.00	3.41
5597	7100	1.011451	GCAACTCTCACAGGAGTCGC	61.011	60.000	0.00	0.00	44.67	5.19
5636	7311	8.289618	TGGAAAAGAAAGTACAAATTCGATCAG	58.710	33.333	0.00	0.00	0.00	2.90
5637	7312	8.160521	TGGAAAAGAAAGTACAAATTCGATCA	57.839	30.769	0.00	0.00	0.00	2.92
5640	7315	8.225107	CGTATGGAAAAGAAAGTACAAATTCGA	58.775	33.333	0.00	0.00	0.00	3.71
5641	7316	8.225107	TCGTATGGAAAAGAAAGTACAAATTCG	58.775	33.333	0.00	0.00	0.00	3.34
5642	7317	9.326339	GTCGTATGGAAAAGAAAGTACAAATTC	57.674	33.333	0.00	0.00	0.00	2.17
5643	7318	8.294577	GGTCGTATGGAAAAGAAAGTACAAATT	58.705	33.333	0.00	0.00	0.00	1.82
5644	7319	7.446013	TGGTCGTATGGAAAAGAAAGTACAAAT	59.554	33.333	0.00	0.00	0.00	2.32
5645	7320	6.766944	TGGTCGTATGGAAAAGAAAGTACAAA	59.233	34.615	0.00	0.00	0.00	2.83
5646	7321	6.289834	TGGTCGTATGGAAAAGAAAGTACAA	58.710	36.000	0.00	0.00	0.00	2.41
5647	7322	5.856156	TGGTCGTATGGAAAAGAAAGTACA	58.144	37.500	0.00	0.00	0.00	2.90
5648	7323	6.790285	TTGGTCGTATGGAAAAGAAAGTAC	57.210	37.500	0.00	0.00	0.00	2.73
5691	7366	3.799753	CCAAGTCTGGATTCGGCG	58.200	61.111	0.00	0.00	46.92	6.46
5780	7463	2.282462	CGGCCCTTTGGAGTTGCT	60.282	61.111	0.00	0.00	0.00	3.91
5781	7464	2.282180	TCGGCCCTTTGGAGTTGC	60.282	61.111	0.00	0.00	0.00	4.17
5782	7465	1.971695	GGTCGGCCCTTTGGAGTTG	60.972	63.158	0.00	0.00	0.00	3.16
5783	7466	2.434774	GGTCGGCCCTTTGGAGTT	59.565	61.111	0.00	0.00	0.00	3.01
5795	7478	3.192922	GCGGACGAAATGGGTCGG	61.193	66.667	0.00	0.00	45.40	4.79
5796	7479	3.192922	GGCGGACGAAATGGGTCG	61.193	66.667	0.00	0.00	46.54	4.79
5797	7480	2.106683	CAGGCGGACGAAATGGGTC	61.107	63.158	0.00	0.00	0.00	4.46
5798	7481	2.046314	CAGGCGGACGAAATGGGT	60.046	61.111	0.00	0.00	0.00	4.51
5799	7482	3.508840	GCAGGCGGACGAAATGGG	61.509	66.667	0.00	0.00	0.00	4.00
5800	7483	2.051804	GATGCAGGCGGACGAAATGG	62.052	60.000	0.00	0.00	0.00	3.16
5801	7484	1.353103	GATGCAGGCGGACGAAATG	59.647	57.895	0.00	0.00	0.00	2.32
5802	7485	1.819632	GGATGCAGGCGGACGAAAT	60.820	57.895	0.00	0.00	0.00	2.17
5803	7486	2.435938	GGATGCAGGCGGACGAAA	60.436	61.111	0.00	0.00	0.00	3.46
5804	7487	4.812476	CGGATGCAGGCGGACGAA	62.812	66.667	0.00	0.00	0.00	3.85
5807	7490	2.746277	AAACGGATGCAGGCGGAC	60.746	61.111	0.00	0.00	0.00	4.79
5808	7491	2.745884	CAAACGGATGCAGGCGGA	60.746	61.111	0.00	0.00	0.00	5.54
5809	7492	3.814268	CCAAACGGATGCAGGCGG	61.814	66.667	0.00	0.00	0.00	6.13
5810	7493	3.814268	CCCAAACGGATGCAGGCG	61.814	66.667	0.00	0.00	0.00	5.52
5811	7494	2.676471	ACCCAAACGGATGCAGGC	60.676	61.111	0.00	0.00	34.64	4.85
5812	7495	2.398554	CGACCCAAACGGATGCAGG	61.399	63.158	0.00	0.00	34.64	4.85
5813	7496	3.177600	CGACCCAAACGGATGCAG	58.822	61.111	0.00	0.00	34.64	4.41
5820	7503	2.359354	TCCATGCCGACCCAAACG	60.359	61.111	0.00	0.00	0.00	3.60
5821	7504	1.175983	TTGTCCATGCCGACCCAAAC	61.176	55.000	0.38	0.00	31.35	2.93
5822	7505	0.468214	TTTGTCCATGCCGACCCAAA	60.468	50.000	0.38	0.00	31.35	3.28
5823	7506	0.468214	TTTTGTCCATGCCGACCCAA	60.468	50.000	0.38	0.00	31.35	4.12
5824	7507	0.893270	CTTTTGTCCATGCCGACCCA	60.893	55.000	0.38	0.00	31.35	4.51
5825	7508	0.893727	ACTTTTGTCCATGCCGACCC	60.894	55.000	0.38	0.00	31.35	4.46
5826	7509	0.240945	CACTTTTGTCCATGCCGACC	59.759	55.000	0.38	0.00	31.35	4.79
5827	7510	1.069227	GTCACTTTTGTCCATGCCGAC	60.069	52.381	0.00	0.00	0.00	4.79
5828	7511	1.234821	GTCACTTTTGTCCATGCCGA	58.765	50.000	0.00	0.00	0.00	5.54
5829	7512	0.110238	CGTCACTTTTGTCCATGCCG	60.110	55.000	0.00	0.00	0.00	5.69
5830	7513	0.240945	CCGTCACTTTTGTCCATGCC	59.759	55.000	0.00	0.00	0.00	4.40
5831	7514	0.387239	GCCGTCACTTTTGTCCATGC	60.387	55.000	0.00	0.00	0.00	4.06
5832	7515	0.240945	GGCCGTCACTTTTGTCCATG	59.759	55.000	0.00	0.00	0.00	3.66
5833	7516	0.893727	GGGCCGTCACTTTTGTCCAT	60.894	55.000	0.00	0.00	0.00	3.41
5834	7517	1.527380	GGGCCGTCACTTTTGTCCA	60.527	57.895	0.00	0.00	0.00	4.02
5835	7518	1.104577	TTGGGCCGTCACTTTTGTCC	61.105	55.000	0.00	0.00	0.00	4.02
5836	7519	0.030235	GTTGGGCCGTCACTTTTGTC	59.970	55.000	0.00	0.00	0.00	3.18
5837	7520	1.720694	CGTTGGGCCGTCACTTTTGT	61.721	55.000	0.00	0.00	0.00	2.83
5838	7521	1.008995	CGTTGGGCCGTCACTTTTG	60.009	57.895	0.00	0.00	0.00	2.44
5839	7522	1.452470	ACGTTGGGCCGTCACTTTT	60.452	52.632	0.00	0.00	35.95	2.27
5840	7523	2.184167	CACGTTGGGCCGTCACTTT	61.184	57.895	0.00	0.00	39.45	2.66
5841	7524	2.590575	CACGTTGGGCCGTCACTT	60.591	61.111	0.00	0.00	39.45	3.16
5856	7539	1.468506	ATTTGGGTTTGGGTCGGCAC	61.469	55.000	0.00	0.00	0.00	5.01
5857	7540	1.152440	ATTTGGGTTTGGGTCGGCA	60.152	52.632	0.00	0.00	0.00	5.69
5858	7541	1.182385	TGATTTGGGTTTGGGTCGGC	61.182	55.000	0.00	0.00	0.00	5.54
5859	7542	0.601057	GTGATTTGGGTTTGGGTCGG	59.399	55.000	0.00	0.00	0.00	4.79
5860	7543	0.239879	CGTGATTTGGGTTTGGGTCG	59.760	55.000	0.00	0.00	0.00	4.79
5861	7544	1.268625	GACGTGATTTGGGTTTGGGTC	59.731	52.381	0.00	0.00	0.00	4.46
5862	7545	1.324383	GACGTGATTTGGGTTTGGGT	58.676	50.000	0.00	0.00	0.00	4.51
5863	7546	1.269448	CTGACGTGATTTGGGTTTGGG	59.731	52.381	0.00	0.00	0.00	4.12
5864	7547	1.335872	GCTGACGTGATTTGGGTTTGG	60.336	52.381	0.00	0.00	0.00	3.28
5865	7548	1.608590	AGCTGACGTGATTTGGGTTTG	59.391	47.619	0.00	0.00	0.00	2.93
5866	7549	1.981256	AGCTGACGTGATTTGGGTTT	58.019	45.000	0.00	0.00	0.00	3.27
5867	7550	1.880027	GAAGCTGACGTGATTTGGGTT	59.120	47.619	0.00	0.00	0.00	4.11
5868	7551	1.523758	GAAGCTGACGTGATTTGGGT	58.476	50.000	0.00	0.00	0.00	4.51
5869	7552	0.443869	CGAAGCTGACGTGATTTGGG	59.556	55.000	0.00	0.00	0.00	4.12
5870	7553	3.955429	CGAAGCTGACGTGATTTGG	57.045	52.632	0.00	0.00	0.00	3.28
5902	7585	3.488573	CATTTGGGCCGCAAATGC	58.511	55.556	30.16	6.40	41.27	3.56
5903	7586	2.454464	CGCATTTGGGCCGCAAATG	61.454	57.895	33.34	33.34	46.82	2.32
5904	7587	2.125592	CGCATTTGGGCCGCAAAT	60.126	55.556	20.27	20.27	33.03	2.32
5905	7588	3.565910	GACGCATTTGGGCCGCAAA	62.566	57.895	18.05	18.05	0.00	3.68
5906	7589	4.049640	GACGCATTTGGGCCGCAA	62.050	61.111	0.00	0.00	0.00	4.85
5912	7595	4.459331	CACGCCGACGCATTTGGG	62.459	66.667	0.00	0.00	45.53	4.12
5913	7596	4.459331	CCACGCCGACGCATTTGG	62.459	66.667	0.00	0.00	45.53	3.28
5914	7597	3.418913	TCCACGCCGACGCATTTG	61.419	61.111	0.00	0.00	45.53	2.32
5915	7598	3.419759	GTCCACGCCGACGCATTT	61.420	61.111	0.00	0.00	45.53	2.32
5953	7636	1.371595	TAAATTAAGCGCGTGGGGAC	58.628	50.000	8.43	0.00	0.00	4.46
5954	7637	1.944024	CATAAATTAAGCGCGTGGGGA	59.056	47.619	8.43	0.00	0.00	4.81
5955	7638	1.944024	TCATAAATTAAGCGCGTGGGG	59.056	47.619	8.43	0.00	0.00	4.96
5956	7639	2.286772	GGTCATAAATTAAGCGCGTGGG	60.287	50.000	8.43	0.00	0.00	4.61
5957	7640	2.353269	TGGTCATAAATTAAGCGCGTGG	59.647	45.455	8.43	0.00	0.00	4.94
5958	7641	3.063452	AGTGGTCATAAATTAAGCGCGTG	59.937	43.478	8.43	0.00	0.00	5.34
5959	7642	3.063452	CAGTGGTCATAAATTAAGCGCGT	59.937	43.478	8.43	0.00	0.00	6.01
5960	7643	3.546020	CCAGTGGTCATAAATTAAGCGCG	60.546	47.826	0.00	0.00	0.00	6.86
5961	7644	3.792124	GCCAGTGGTCATAAATTAAGCGC	60.792	47.826	11.74	0.00	0.00	5.92
5962	7645	3.243068	GGCCAGTGGTCATAAATTAAGCG	60.243	47.826	9.48	0.00	0.00	4.68
5963	7646	3.068165	GGGCCAGTGGTCATAAATTAAGC	59.932	47.826	17.31	0.00	0.00	3.09
5964	7647	4.097892	GTGGGCCAGTGGTCATAAATTAAG	59.902	45.833	17.31	0.00	0.00	1.85
5965	7648	4.020543	GTGGGCCAGTGGTCATAAATTAA	58.979	43.478	17.31	0.00	0.00	1.40
5966	7649	3.626930	GTGGGCCAGTGGTCATAAATTA	58.373	45.455	17.31	0.00	0.00	1.40
5967	7650	2.456577	GTGGGCCAGTGGTCATAAATT	58.543	47.619	17.31	0.00	0.00	1.82
5968	7651	1.681780	CGTGGGCCAGTGGTCATAAAT	60.682	52.381	17.31	0.00	0.00	1.40
5969	7652	0.322098	CGTGGGCCAGTGGTCATAAA	60.322	55.000	17.31	0.00	0.00	1.40
5970	7653	1.298340	CGTGGGCCAGTGGTCATAA	59.702	57.895	17.31	0.00	0.00	1.90
5971	7654	2.986290	CGTGGGCCAGTGGTCATA	59.014	61.111	17.31	0.19	0.00	2.15
5972	7655	4.722700	GCGTGGGCCAGTGGTCAT	62.723	66.667	17.31	0.00	0.00	3.06
5995	7678	1.778027	AAAAAGGACAACCGCCGTCG	61.778	55.000	0.00	0.00	41.83	5.12
5996	7679	2.027325	AAAAAGGACAACCGCCGTC	58.973	52.632	0.00	0.00	41.83	4.79
5997	7680	4.246053	AAAAAGGACAACCGCCGT	57.754	50.000	0.00	0.00	41.83	5.68
6011	7694	1.570475	CGCACGGTCGGCTTAAAAA	59.430	52.632	0.00	0.00	0.00	1.94
6012	7695	2.319096	CCGCACGGTCGGCTTAAAA	61.319	57.895	0.00	0.00	43.18	1.52
6013	7696	2.739287	CCGCACGGTCGGCTTAAA	60.739	61.111	0.00	0.00	43.18	1.52
6029	7712	4.554036	GATGAGGACAGCCCCGCC	62.554	72.222	0.00	0.00	34.66	6.13
6030	7713	4.554036	GGATGAGGACAGCCCCGC	62.554	72.222	0.00	0.00	45.68	6.13
6035	7718	1.363744	CGAGTTTGGATGAGGACAGC	58.636	55.000	0.00	0.00	0.00	4.40
6036	7719	1.363744	GCGAGTTTGGATGAGGACAG	58.636	55.000	0.00	0.00	0.00	3.51
6037	7720	0.036388	GGCGAGTTTGGATGAGGACA	60.036	55.000	0.00	0.00	0.00	4.02
6038	7721	1.084370	CGGCGAGTTTGGATGAGGAC	61.084	60.000	0.00	0.00	0.00	3.85
6039	7722	1.218047	CGGCGAGTTTGGATGAGGA	59.782	57.895	0.00	0.00	0.00	3.71
6040	7723	1.079127	ACGGCGAGTTTGGATGAGG	60.079	57.895	16.62	0.00	0.00	3.86
6041	7724	1.084370	GGACGGCGAGTTTGGATGAG	61.084	60.000	16.62	0.00	0.00	2.90
6042	7725	1.079405	GGACGGCGAGTTTGGATGA	60.079	57.895	16.62	0.00	0.00	2.92
6043	7726	1.375396	TGGACGGCGAGTTTGGATG	60.375	57.895	16.62	0.00	0.00	3.51
6044	7727	1.375523	GTGGACGGCGAGTTTGGAT	60.376	57.895	16.62	0.00	0.00	3.41
6045	7728	2.029964	GTGGACGGCGAGTTTGGA	59.970	61.111	16.62	0.00	0.00	3.53
6046	7729	1.635663	GATGTGGACGGCGAGTTTGG	61.636	60.000	16.62	0.00	0.00	3.28
6047	7730	1.787847	GATGTGGACGGCGAGTTTG	59.212	57.895	16.62	0.00	0.00	2.93
6048	7731	1.736645	CGATGTGGACGGCGAGTTT	60.737	57.895	16.62	0.00	0.00	2.66
6049	7732	2.126071	CGATGTGGACGGCGAGTT	60.126	61.111	16.62	0.00	0.00	3.01
6050	7733	3.052620	CTCGATGTGGACGGCGAGT	62.053	63.158	16.62	0.00	43.65	4.18
6051	7734	2.278206	CTCGATGTGGACGGCGAG	60.278	66.667	16.62	0.00	43.25	5.03
6052	7735	4.492160	GCTCGATGTGGACGGCGA	62.492	66.667	16.62	0.00	0.00	5.54
6053	7736	4.794439	TGCTCGATGTGGACGGCG	62.794	66.667	4.80	4.80	32.72	6.46
6054	7737	2.434185	TTGCTCGATGTGGACGGC	60.434	61.111	0.00	0.00	0.00	5.68
6055	7738	2.456119	GCTTGCTCGATGTGGACGG	61.456	63.158	0.00	0.00	0.00	4.79
6056	7739	1.016130	AAGCTTGCTCGATGTGGACG	61.016	55.000	0.00	0.00	0.00	4.79
6057	7740	1.135859	CAAAGCTTGCTCGATGTGGAC	60.136	52.381	0.00	0.00	0.00	4.02
6058	7741	1.159285	CAAAGCTTGCTCGATGTGGA	58.841	50.000	0.00	0.00	0.00	4.02
6059	7742	3.689224	CAAAGCTTGCTCGATGTGG	57.311	52.632	0.00	0.00	0.00	4.17
6069	7752	2.282462	ACGGGGGAGCAAAGCTTG	60.282	61.111	0.00	0.00	39.88	4.01
6070	7753	2.034221	GACGGGGGAGCAAAGCTT	59.966	61.111	0.00	0.00	39.88	3.74
6071	7754	4.394712	CGACGGGGGAGCAAAGCT	62.395	66.667	0.00	0.00	43.88	3.74
6085	7768	2.098831	GCTAGGGTTTGTCGGCGAC	61.099	63.158	31.68	31.68	0.00	5.19
6086	7769	2.102109	TTGCTAGGGTTTGTCGGCGA	62.102	55.000	4.99	4.99	0.00	5.54
6087	7770	1.669760	TTGCTAGGGTTTGTCGGCG	60.670	57.895	0.00	0.00	0.00	6.46
6088	7771	1.583495	GGTTGCTAGGGTTTGTCGGC	61.583	60.000	0.00	0.00	0.00	5.54
6089	7772	0.250553	TGGTTGCTAGGGTTTGTCGG	60.251	55.000	0.00	0.00	0.00	4.79
6090	7773	0.872388	GTGGTTGCTAGGGTTTGTCG	59.128	55.000	0.00	0.00	0.00	4.35
6091	7774	1.244816	GGTGGTTGCTAGGGTTTGTC	58.755	55.000	0.00	0.00	0.00	3.18
6092	7775	0.553819	TGGTGGTTGCTAGGGTTTGT	59.446	50.000	0.00	0.00	0.00	2.83
6093	7776	0.958822	GTGGTGGTTGCTAGGGTTTG	59.041	55.000	0.00	0.00	0.00	2.93
6094	7777	0.178973	GGTGGTGGTTGCTAGGGTTT	60.179	55.000	0.00	0.00	0.00	3.27
6095	7778	1.357272	TGGTGGTGGTTGCTAGGGTT	61.357	55.000	0.00	0.00	0.00	4.11
6096	7779	1.772567	TGGTGGTGGTTGCTAGGGT	60.773	57.895	0.00	0.00	0.00	4.34
6097	7780	1.303317	GTGGTGGTGGTTGCTAGGG	60.303	63.158	0.00	0.00	0.00	3.53
6098	7781	0.606401	CTGTGGTGGTGGTTGCTAGG	60.606	60.000	0.00	0.00	0.00	3.02
6099	7782	1.237285	GCTGTGGTGGTGGTTGCTAG	61.237	60.000	0.00	0.00	0.00	3.42
6100	7783	1.228124	GCTGTGGTGGTGGTTGCTA	60.228	57.895	0.00	0.00	0.00	3.49
6101	7784	2.519302	GCTGTGGTGGTGGTTGCT	60.519	61.111	0.00	0.00	0.00	3.91
6102	7785	3.964875	CGCTGTGGTGGTGGTTGC	61.965	66.667	0.00	0.00	0.00	4.17
6103	7786	2.203139	TCGCTGTGGTGGTGGTTG	60.203	61.111	0.00	0.00	0.00	3.77
6104	7787	1.768684	ATCTCGCTGTGGTGGTGGTT	61.769	55.000	0.00	0.00	0.00	3.67
6105	7788	1.768684	AATCTCGCTGTGGTGGTGGT	61.769	55.000	0.00	0.00	0.00	4.16
6106	7789	1.003355	AATCTCGCTGTGGTGGTGG	60.003	57.895	0.00	0.00	0.00	4.61
6107	7790	0.603707	ACAATCTCGCTGTGGTGGTG	60.604	55.000	0.00	0.00	0.00	4.17
6108	7791	0.603707	CACAATCTCGCTGTGGTGGT	60.604	55.000	0.00	0.00	40.44	4.16
6109	7792	0.320683	TCACAATCTCGCTGTGGTGG	60.321	55.000	3.50	0.00	43.60	4.61
6110	7793	0.792640	GTCACAATCTCGCTGTGGTG	59.207	55.000	3.50	0.00	43.60	4.17
6111	7794	0.667487	CGTCACAATCTCGCTGTGGT	60.667	55.000	3.50	0.00	43.60	4.16
6112	7795	1.959899	GCGTCACAATCTCGCTGTGG	61.960	60.000	3.50	0.00	43.60	4.17
6113	7796	1.417592	GCGTCACAATCTCGCTGTG	59.582	57.895	0.00	0.00	45.29	3.66
6114	7797	3.862124	GCGTCACAATCTCGCTGT	58.138	55.556	0.00	0.00	45.29	4.40
6118	7801	3.554692	GCGGGCGTCACAATCTCG	61.555	66.667	0.00	0.00	0.00	4.04
6119	7802	0.529773	TATGCGGGCGTCACAATCTC	60.530	55.000	0.00	0.00	0.00	2.75
6120	7803	0.107897	TTATGCGGGCGTCACAATCT	60.108	50.000	0.00	0.00	0.00	2.40
6121	7804	0.944386	ATTATGCGGGCGTCACAATC	59.056	50.000	0.00	0.00	0.00	2.67
6122	7805	1.388547	AATTATGCGGGCGTCACAAT	58.611	45.000	0.00	0.00	0.00	2.71
6123	7806	1.937223	CTAATTATGCGGGCGTCACAA	59.063	47.619	0.00	0.00	0.00	3.33
6124	7807	1.577468	CTAATTATGCGGGCGTCACA	58.423	50.000	0.00	0.00	0.00	3.58
6125	7808	0.865769	CCTAATTATGCGGGCGTCAC	59.134	55.000	0.00	0.00	0.00	3.67
6126	7809	0.882927	GCCTAATTATGCGGGCGTCA	60.883	55.000	0.00	0.00	35.08	4.35
6127	7810	1.866925	GCCTAATTATGCGGGCGTC	59.133	57.895	0.00	0.00	35.08	5.19
6128	7811	4.058797	GCCTAATTATGCGGGCGT	57.941	55.556	0.00	0.00	35.08	5.68
6130	7813	2.076863	CTGTAGCCTAATTATGCGGGC	58.923	52.381	7.03	6.27	44.38	6.13
6131	7814	3.402628	ACTGTAGCCTAATTATGCGGG	57.597	47.619	7.03	0.00	0.00	6.13
6132	7815	6.092259	GGAATTACTGTAGCCTAATTATGCGG	59.908	42.308	7.03	0.00	0.00	5.69
6133	7816	6.649141	TGGAATTACTGTAGCCTAATTATGCG	59.351	38.462	7.03	0.00	0.00	4.73
6134	7817	7.360101	CGTGGAATTACTGTAGCCTAATTATGC	60.360	40.741	4.70	4.70	0.00	3.14
6135	7818	7.656137	ACGTGGAATTACTGTAGCCTAATTATG	59.344	37.037	0.00	0.00	0.00	1.90
6136	7819	7.732996	ACGTGGAATTACTGTAGCCTAATTAT	58.267	34.615	0.00	0.00	0.00	1.28
6137	7820	7.116075	ACGTGGAATTACTGTAGCCTAATTA	57.884	36.000	0.00	0.00	0.00	1.40
6138	7821	5.985911	ACGTGGAATTACTGTAGCCTAATT	58.014	37.500	0.00	0.00	0.00	1.40
6139	7822	5.609533	ACGTGGAATTACTGTAGCCTAAT	57.390	39.130	0.00	0.00	0.00	1.73
6140	7823	5.410355	AACGTGGAATTACTGTAGCCTAA	57.590	39.130	0.00	0.00	0.00	2.69
6141	7824	6.332630	GTTAACGTGGAATTACTGTAGCCTA	58.667	40.000	0.00	0.00	0.00	3.93
6142	7825	3.975168	AACGTGGAATTACTGTAGCCT	57.025	42.857	0.00	0.00	0.00	4.58
6143	7826	4.032104	CGTTAACGTGGAATTACTGTAGCC	59.968	45.833	19.75	0.00	34.11	3.93
6144	7827	4.858692	TCGTTAACGTGGAATTACTGTAGC	59.141	41.667	25.98	0.00	40.80	3.58
6145	7828	6.507456	GCATCGTTAACGTGGAATTACTGTAG	60.507	42.308	25.98	1.96	40.80	2.74
6146	7829	5.289193	GCATCGTTAACGTGGAATTACTGTA	59.711	40.000	25.98	3.87	40.80	2.74
6147	7830	4.092383	GCATCGTTAACGTGGAATTACTGT	59.908	41.667	25.98	0.00	40.80	3.55
6148	7831	4.493545	GGCATCGTTAACGTGGAATTACTG	60.494	45.833	25.98	11.92	40.80	2.74
6149	7832	3.619929	GGCATCGTTAACGTGGAATTACT	59.380	43.478	25.98	0.57	40.80	2.24
6150	7833	3.371591	TGGCATCGTTAACGTGGAATTAC	59.628	43.478	25.98	10.90	40.80	1.89
6151	7834	3.597255	TGGCATCGTTAACGTGGAATTA	58.403	40.909	25.98	6.82	40.80	1.40
6152	7835	2.418628	CTGGCATCGTTAACGTGGAATT	59.581	45.455	25.98	4.55	40.80	2.17
6153	7836	2.006888	CTGGCATCGTTAACGTGGAAT	58.993	47.619	25.98	10.69	40.80	3.01
6154	7837	1.434555	CTGGCATCGTTAACGTGGAA	58.565	50.000	25.98	8.70	40.80	3.53
6155	7838	0.390603	CCTGGCATCGTTAACGTGGA	60.391	55.000	25.98	9.08	40.80	4.02
6156	7839	0.672401	ACCTGGCATCGTTAACGTGG	60.672	55.000	25.98	19.51	40.80	4.94
6157	7840	0.719465	GACCTGGCATCGTTAACGTG	59.281	55.000	25.98	22.24	40.80	4.49
6158	7841	0.319083	TGACCTGGCATCGTTAACGT	59.681	50.000	25.98	11.94	40.80	3.99
6159	7842	0.719465	GTGACCTGGCATCGTTAACG	59.281	55.000	21.85	21.85	41.45	3.18
6160	7843	1.084289	GGTGACCTGGCATCGTTAAC	58.916	55.000	0.00	0.00	0.00	2.01
6161	7844	0.981183	AGGTGACCTGGCATCGTTAA	59.019	50.000	1.77	0.00	29.57	2.01
6162	7845	0.535335	GAGGTGACCTGGCATCGTTA	59.465	55.000	9.89	0.00	31.76	3.18
6163	7846	1.296715	GAGGTGACCTGGCATCGTT	59.703	57.895	9.89	0.00	31.76	3.85
6164	7847	2.982130	GAGGTGACCTGGCATCGT	59.018	61.111	9.89	0.00	31.76	3.73
6165	7848	2.202797	CGAGGTGACCTGGCATCG	60.203	66.667	9.89	1.52	31.76	3.84
6166	7849	2.185310	AACCGAGGTGACCTGGCATC	62.185	60.000	9.89	0.00	31.76	3.91
6167	7850	0.907704	TAACCGAGGTGACCTGGCAT	60.908	55.000	9.89	6.56	31.76	4.40
6168	7851	1.534476	TAACCGAGGTGACCTGGCA	60.534	57.895	9.89	0.00	31.76	4.92
6169	7852	1.079336	GTAACCGAGGTGACCTGGC	60.079	63.158	9.89	0.00	31.76	4.85
6170	7853	0.246635	CAGTAACCGAGGTGACCTGG	59.753	60.000	9.89	13.65	31.76	4.45
6171	7854	0.966920	ACAGTAACCGAGGTGACCTG	59.033	55.000	9.89	0.00	31.76	4.00
6172	7855	1.343465	CAACAGTAACCGAGGTGACCT	59.657	52.381	2.41	2.41	36.03	3.85
6173	7856	1.792006	CAACAGTAACCGAGGTGACC	58.208	55.000	6.15	0.00	29.73	4.02
6174	7857	1.145803	GCAACAGTAACCGAGGTGAC	58.854	55.000	1.38	1.38	0.00	3.67
6175	7858	1.045407	AGCAACAGTAACCGAGGTGA	58.955	50.000	0.00	0.00	0.00	4.02
6176	7859	2.736144	TAGCAACAGTAACCGAGGTG	57.264	50.000	0.00	0.00	0.00	4.00
6177	7860	3.514309	AGATTAGCAACAGTAACCGAGGT	59.486	43.478	0.00	0.00	0.00	3.85
6178	7861	4.113354	GAGATTAGCAACAGTAACCGAGG	58.887	47.826	0.00	0.00	0.00	4.63
6179	7862	3.791887	CGAGATTAGCAACAGTAACCGAG	59.208	47.826	0.00	0.00	0.00	4.63
6180	7863	3.766151	CGAGATTAGCAACAGTAACCGA	58.234	45.455	0.00	0.00	0.00	4.69
6181	7864	2.281762	GCGAGATTAGCAACAGTAACCG	59.718	50.000	0.00	0.00	34.19	4.44
6182	7865	2.281762	CGCGAGATTAGCAACAGTAACC	59.718	50.000	0.00	0.00	34.19	2.85
6183	7866	2.921754	ACGCGAGATTAGCAACAGTAAC	59.078	45.455	15.93	0.00	34.19	2.50
6184	7867	3.226346	ACGCGAGATTAGCAACAGTAA	57.774	42.857	15.93	0.00	34.19	2.24
6185	7868	2.921121	CAACGCGAGATTAGCAACAGTA	59.079	45.455	15.93	0.00	34.19	2.74
6186	7869	1.726791	CAACGCGAGATTAGCAACAGT	59.273	47.619	15.93	0.00	34.19	3.55
6187	7870	1.061131	CCAACGCGAGATTAGCAACAG	59.939	52.381	15.93	0.00	34.19	3.16
6188	7871	1.075542	CCAACGCGAGATTAGCAACA	58.924	50.000	15.93	0.00	34.19	3.33
6189	7872	1.355971	TCCAACGCGAGATTAGCAAC	58.644	50.000	15.93	0.00	34.19	4.17
6190	7873	2.201732	GATCCAACGCGAGATTAGCAA	58.798	47.619	15.93	0.00	34.19	3.91
6191	7874	1.136110	TGATCCAACGCGAGATTAGCA	59.864	47.619	15.93	3.88	34.19	3.49
6192	7875	1.852942	TGATCCAACGCGAGATTAGC	58.147	50.000	15.93	1.21	0.00	3.09
6193	7876	4.578601	GTTTTGATCCAACGCGAGATTAG	58.421	43.478	15.93	0.00	0.00	1.73
6194	7877	3.061563	CGTTTTGATCCAACGCGAGATTA	59.938	43.478	15.93	6.00	40.49	1.75
6195	7878	2.159707	CGTTTTGATCCAACGCGAGATT	60.160	45.455	15.93	0.00	40.49	2.40
6196	7879	1.393539	CGTTTTGATCCAACGCGAGAT	59.606	47.619	15.93	12.20	40.49	2.75
6197	7880	0.787787	CGTTTTGATCCAACGCGAGA	59.212	50.000	15.93	6.95	40.49	4.04
6198	7881	3.274196	CGTTTTGATCCAACGCGAG	57.726	52.632	15.93	4.40	40.49	5.03
6203	7886	7.227992	TGATTTTGAAACGTTTTGATCCAAC	57.772	32.000	15.89	0.00	0.00	3.77
6204	7887	7.834068	TTGATTTTGAAACGTTTTGATCCAA	57.166	28.000	15.89	11.15	0.00	3.53
6205	7888	7.834068	TTTGATTTTGAAACGTTTTGATCCA	57.166	28.000	15.89	5.09	0.00	3.41
6206	7889	9.715123	AAATTTGATTTTGAAACGTTTTGATCC	57.285	25.926	15.89	2.21	0.00	3.36
6267	7950	6.899243	GTCACATTCCGAACATTTTTGTTTTG	59.101	34.615	0.00	0.00	31.35	2.44
6268	7951	6.591834	TGTCACATTCCGAACATTTTTGTTTT	59.408	30.769	0.00	0.00	31.35	2.43
6270	7953	5.655488	TGTCACATTCCGAACATTTTTGTT	58.345	33.333	0.00	0.00	34.29	2.83
6272	7955	7.865875	TTATGTCACATTCCGAACATTTTTG	57.134	32.000	0.00	0.00	34.39	2.44
6274	7957	9.787532	CTAATTATGTCACATTCCGAACATTTT	57.212	29.630	0.00	0.00	34.39	1.82
6275	7958	8.405531	CCTAATTATGTCACATTCCGAACATTT	58.594	33.333	0.00	0.00	34.39	2.32
6277	7960	7.054124	ACCTAATTATGTCACATTCCGAACAT	58.946	34.615	0.00	0.00	36.40	2.71
6278	7961	6.411376	ACCTAATTATGTCACATTCCGAACA	58.589	36.000	0.00	0.00	0.00	3.18
6279	7962	6.920569	ACCTAATTATGTCACATTCCGAAC	57.079	37.500	0.00	0.00	0.00	3.95
6280	7963	7.931578	AAACCTAATTATGTCACATTCCGAA	57.068	32.000	0.00	0.00	0.00	4.30
6282	7965	8.433421	AGTAAACCTAATTATGTCACATTCCG	57.567	34.615	0.00	0.00	0.00	4.30
6292	7975	9.821662	GCGCCTAATTTAGTAAACCTAATTATG	57.178	33.333	0.00	0.00	35.59	1.90
6293	7976	9.563748	TGCGCCTAATTTAGTAAACCTAATTAT	57.436	29.630	4.18	0.00	35.59	1.28
6294	7977	8.961294	TGCGCCTAATTTAGTAAACCTAATTA	57.039	30.769	4.18	0.00	35.59	1.40

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.