Multiple sequence alignment - TraesCS3B01G212700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G212700 chr3B 100.000 4108 0 0 1 4108 252360226 252356119 0.000000e+00 7587
1 TraesCS3B01G212700 chr3D 91.696 2589 99 46 774 3314 173618560 173616040 0.000000e+00 3483
2 TraesCS3B01G212700 chr3D 93.306 493 14 4 3615 4097 173615537 173615054 0.000000e+00 710
3 TraesCS3B01G212700 chr3D 96.992 266 5 2 3317 3582 173615795 173615533 1.050000e-120 444
4 TraesCS3B01G212700 chr3D 89.259 270 29 0 99 368 24569704 24569435 5.090000e-89 339
5 TraesCS3B01G212700 chr3D 89.354 263 28 0 99 361 452487078 452487340 8.510000e-87 331
6 TraesCS3B01G212700 chr3D 87.013 154 18 2 589 742 595079485 595079636 5.460000e-39 172
7 TraesCS3B01G212700 chr3A 94.305 1791 67 12 1800 3581 212089434 212087670 0.000000e+00 2710
8 TraesCS3B01G212700 chr3A 93.576 825 36 8 811 1622 212090280 212089460 0.000000e+00 1214
9 TraesCS3B01G212700 chr3A 91.566 249 12 2 3646 3885 212087670 212087422 6.580000e-88 335
10 TraesCS3B01G212700 chr3A 88.519 270 30 1 99 368 49327375 49327107 3.960000e-85 326
11 TraesCS3B01G212700 chr3A 94.286 210 6 1 3887 4096 212087362 212087159 2.380000e-82 316
12 TraesCS3B01G212700 chr3A 92.179 179 14 0 1610 1788 197436144 197436322 1.900000e-63 254
13 TraesCS3B01G212700 chr5A 91.255 263 23 0 99 361 569527245 569527507 3.900000e-95 359
14 TraesCS3B01G212700 chr5A 84.393 173 22 2 1259 1426 32745905 32745733 9.140000e-37 165
15 TraesCS3B01G212700 chr5A 83.553 152 15 5 471 613 623576247 623576397 2.580000e-27 134
16 TraesCS3B01G212700 chr7A 89.630 270 28 0 99 368 10359747 10359478 1.090000e-90 344
17 TraesCS3B01G212700 chr7A 87.218 133 11 3 486 613 104650578 104650709 3.310000e-31 147
18 TraesCS3B01G212700 chr6D 89.259 270 29 0 99 368 454064146 454064415 5.090000e-89 339
19 TraesCS3B01G212700 chr6D 93.567 171 10 1 1613 1783 404594588 404594757 1.900000e-63 254
20 TraesCS3B01G212700 chr6D 87.786 131 10 3 491 615 161146469 161146339 9.200000e-32 148
21 TraesCS3B01G212700 chr6D 86.567 134 14 1 486 615 38888722 38888589 1.190000e-30 145
22 TraesCS3B01G212700 chr7D 88.561 271 29 2 99 368 475155391 475155122 1.100000e-85 327
23 TraesCS3B01G212700 chr7D 82.609 253 20 11 499 742 491797509 491797746 6.960000e-48 202
24 TraesCS3B01G212700 chr7D 88.806 134 9 3 486 613 579964236 579964103 4.250000e-35 159
25 TraesCS3B01G212700 chr1A 88.764 267 30 0 102 368 556086510 556086244 1.100000e-85 327
26 TraesCS3B01G212700 chr1D 88.519 270 30 1 99 368 466407119 466406851 3.960000e-85 326
27 TraesCS3B01G212700 chr4B 96.386 166 6 0 1618 1783 483266376 483266541 1.450000e-69 274
28 TraesCS3B01G212700 chr2D 95.732 164 7 0 1620 1783 445733670 445733833 8.760000e-67 265
29 TraesCS3B01G212700 chr2D 95.679 162 7 0 1621 1782 56540995 56541156 1.130000e-65 261
30 TraesCS3B01G212700 chr2D 86.290 248 25 4 503 742 72575852 72575606 1.130000e-65 261
31 TraesCS3B01G212700 chr2D 91.005 189 13 4 1611 1798 478874302 478874117 6.820000e-63 252
32 TraesCS3B01G212700 chr2D 87.662 154 17 2 589 742 40942680 40942831 1.170000e-40 178
33 TraesCS3B01G212700 chr2D 85.465 172 19 3 1260 1426 52693594 52693424 1.520000e-39 174
34 TraesCS3B01G212700 chr2D 84.302 172 22 2 1260 1426 479769 479940 3.290000e-36 163
35 TraesCS3B01G212700 chr2D 86.822 129 12 2 486 609 261169467 261169339 5.540000e-29 139
36 TraesCS3B01G212700 chr5D 95.152 165 8 0 1618 1782 537178185 537178349 1.130000e-65 261
37 TraesCS3B01G212700 chr5D 87.662 154 17 2 589 742 484404783 484404632 1.170000e-40 178
38 TraesCS3B01G212700 chr5D 83.815 173 24 1 1258 1426 526758941 526758769 1.180000e-35 161
39 TraesCS3B01G212700 chr5D 83.721 172 23 2 1260 1426 60078566 60078395 1.530000e-34 158
40 TraesCS3B01G212700 chr5D 85.294 136 14 3 484 613 281009441 281009306 7.160000e-28 135
41 TraesCS3B01G212700 chr1B 93.678 174 11 0 1619 1792 438040342 438040515 1.130000e-65 261
42 TraesCS3B01G212700 chr1B 90.909 154 12 2 589 742 634236820 634236971 5.380000e-49 206
43 TraesCS3B01G212700 chr1B 85.811 148 16 4 470 613 630246448 630246302 7.110000e-33 152
44 TraesCS3B01G212700 chr4A 89.744 195 17 2 1617 1810 657100994 657101186 3.170000e-61 246
45 TraesCS3B01G212700 chr4A 85.465 172 19 4 1260 1426 605088120 605087950 1.520000e-39 174
46 TraesCS3B01G212700 chr6A 90.780 141 13 0 602 742 61383946 61384086 5.420000e-44 189
47 TraesCS3B01G212700 chr6A 88.312 154 16 1 589 742 532712248 532712097 2.520000e-42 183
48 TraesCS3B01G212700 chr5B 89.394 132 13 1 611 742 477608490 477608360 9.140000e-37 165
49 TraesCS3B01G212700 chr7B 80.503 159 24 4 1260 1412 677357321 677357478 9.330000e-22 115


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G212700 chr3B 252356119 252360226 4107 True 7587.000000 7587 100.00000 1 4108 1 chr3B.!!$R1 4107
1 TraesCS3B01G212700 chr3D 173615054 173618560 3506 True 1545.666667 3483 93.99800 774 4097 3 chr3D.!!$R2 3323
2 TraesCS3B01G212700 chr3A 212087159 212090280 3121 True 1143.750000 2710 93.43325 811 4096 4 chr3A.!!$R2 3285

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
323 324 0.034059 GCACCATAGGACTAGCGCAT 59.966 55.0 11.47 0.0 0.00 4.73 F
342 343 0.038892 TCAGAACAGTAACCGTCGCC 60.039 55.0 0.00 0.0 0.00 5.54 F
351 352 0.099968 TAACCGTCGCCGATGAAGAG 59.900 55.0 8.12 0.0 35.63 2.85 F
442 443 0.106894 CTAGGCGGTGGATCTTTCCC 59.893 60.0 0.00 0.0 41.83 3.97 F
539 540 0.109723 TTTCTTCCCACCACCCTTCG 59.890 55.0 0.00 0.0 0.00 3.79 F
823 831 0.168788 AATTGCGCGTCAATGTCCAG 59.831 50.0 22.95 0.0 44.23 3.86 F
1537 1561 0.255890 TTGAGCACCCTTATCCAGGC 59.744 55.0 0.00 0.0 42.29 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1537 1561 1.005394 AACTCCGCAACCCTGTACG 60.005 57.895 0.00 0.00 0.00 3.67 R
2129 2162 1.201987 GGTGTAGCGTGCATTTTACCG 60.202 52.381 0.00 0.00 0.00 4.02 R
2271 2304 9.057089 GTGGTGGATATATAAAACTCTGGAAAG 57.943 37.037 0.00 0.00 0.00 2.62 R
2505 2541 4.207165 AGCAAACCTTTAGACAAGAGCAA 58.793 39.130 0.00 0.00 0.00 3.91 R
2546 2582 5.010617 TCCAGCAGAATACTGATAATACGCA 59.989 40.000 0.00 0.00 46.03 5.24 R
2800 2836 2.002586 GACTCACAGCGTATGCAATGT 58.997 47.619 10.11 2.65 46.23 2.71 R
3289 3338 1.751927 AGTACCAGTACTCGGGCCG 60.752 63.158 22.51 22.51 42.30 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 7.538303 AATAGGTTTTGCAACAAAGAACTTG 57.462 32.000 0.00 0.00 41.19 3.16
27 28 3.684305 AGGTTTTGCAACAAAGAACTTGC 59.316 39.130 0.00 0.00 42.67 4.01
28 29 3.684305 GGTTTTGCAACAAAGAACTTGCT 59.316 39.130 0.00 0.00 42.77 3.91
29 30 4.435917 GGTTTTGCAACAAAGAACTTGCTG 60.436 41.667 0.00 0.00 42.77 4.41
30 31 3.591196 TTGCAACAAAGAACTTGCTGT 57.409 38.095 0.00 0.00 42.77 4.40
31 32 4.710423 TTGCAACAAAGAACTTGCTGTA 57.290 36.364 0.00 0.00 42.77 2.74
32 33 4.291540 TGCAACAAAGAACTTGCTGTAG 57.708 40.909 4.19 0.00 42.77 2.74
33 34 3.944650 TGCAACAAAGAACTTGCTGTAGA 59.055 39.130 4.19 0.00 42.77 2.59
34 35 4.397730 TGCAACAAAGAACTTGCTGTAGAA 59.602 37.500 4.19 0.00 42.77 2.10
35 36 5.105957 TGCAACAAAGAACTTGCTGTAGAAA 60.106 36.000 4.19 0.00 42.77 2.52
36 37 5.804979 GCAACAAAGAACTTGCTGTAGAAAA 59.195 36.000 0.00 0.00 39.79 2.29
37 38 6.476706 GCAACAAAGAACTTGCTGTAGAAAAT 59.523 34.615 0.00 0.00 39.79 1.82
38 39 7.010460 GCAACAAAGAACTTGCTGTAGAAAATT 59.990 33.333 0.00 0.00 39.79 1.82
39 40 9.515020 CAACAAAGAACTTGCTGTAGAAAATTA 57.485 29.630 0.00 0.00 38.75 1.40
40 41 9.736023 AACAAAGAACTTGCTGTAGAAAATTAG 57.264 29.630 0.00 0.00 38.75 1.73
41 42 9.120538 ACAAAGAACTTGCTGTAGAAAATTAGA 57.879 29.630 0.00 0.00 38.75 2.10
42 43 9.950680 CAAAGAACTTGCTGTAGAAAATTAGAA 57.049 29.630 0.00 0.00 0.00 2.10
72 73 9.533253 AAAGGTTTCACAATAAAGATCTTGTTG 57.467 29.630 22.62 22.62 33.45 3.33
73 74 7.147976 AGGTTTCACAATAAAGATCTTGTTGC 58.852 34.615 23.52 12.88 33.45 4.17
74 75 6.922957 GGTTTCACAATAAAGATCTTGTTGCA 59.077 34.615 23.52 13.70 33.45 4.08
75 76 7.096065 GGTTTCACAATAAAGATCTTGTTGCAC 60.096 37.037 23.52 17.29 33.45 4.57
76 77 5.688823 TCACAATAAAGATCTTGTTGCACG 58.311 37.500 23.52 16.27 33.45 5.34
77 78 5.468409 TCACAATAAAGATCTTGTTGCACGA 59.532 36.000 23.52 17.58 33.45 4.35
78 79 6.017523 TCACAATAAAGATCTTGTTGCACGAA 60.018 34.615 23.52 9.86 33.45 3.85
79 80 6.636447 CACAATAAAGATCTTGTTGCACGAAA 59.364 34.615 23.52 0.00 33.45 3.46
80 81 7.326789 CACAATAAAGATCTTGTTGCACGAAAT 59.673 33.333 23.52 8.44 33.45 2.17
81 82 7.867403 ACAATAAAGATCTTGTTGCACGAAATT 59.133 29.630 23.52 7.93 31.74 1.82
82 83 9.340695 CAATAAAGATCTTGTTGCACGAAATTA 57.659 29.630 9.17 0.00 0.00 1.40
83 84 9.559958 AATAAAGATCTTGTTGCACGAAATTAG 57.440 29.630 9.17 0.00 0.00 1.73
84 85 6.801539 AAGATCTTGTTGCACGAAATTAGA 57.198 33.333 7.30 0.00 0.00 2.10
85 86 6.414408 AGATCTTGTTGCACGAAATTAGAG 57.586 37.500 0.00 0.00 0.00 2.43
86 87 6.166279 AGATCTTGTTGCACGAAATTAGAGA 58.834 36.000 0.00 0.00 0.00 3.10
87 88 6.650807 AGATCTTGTTGCACGAAATTAGAGAA 59.349 34.615 0.00 0.00 0.00 2.87
88 89 6.228273 TCTTGTTGCACGAAATTAGAGAAG 57.772 37.500 0.00 0.00 0.00 2.85
89 90 5.179368 TCTTGTTGCACGAAATTAGAGAAGG 59.821 40.000 0.00 0.00 0.00 3.46
90 91 3.751175 TGTTGCACGAAATTAGAGAAGGG 59.249 43.478 0.00 0.00 0.00 3.95
91 92 2.985896 TGCACGAAATTAGAGAAGGGG 58.014 47.619 0.00 0.00 0.00 4.79
92 93 2.569853 TGCACGAAATTAGAGAAGGGGA 59.430 45.455 0.00 0.00 0.00 4.81
93 94 3.008594 TGCACGAAATTAGAGAAGGGGAA 59.991 43.478 0.00 0.00 0.00 3.97
94 95 4.007659 GCACGAAATTAGAGAAGGGGAAA 58.992 43.478 0.00 0.00 0.00 3.13
95 96 4.457949 GCACGAAATTAGAGAAGGGGAAAA 59.542 41.667 0.00 0.00 0.00 2.29
96 97 5.048294 GCACGAAATTAGAGAAGGGGAAAAA 60.048 40.000 0.00 0.00 0.00 1.94
118 119 8.424274 AAAAATTGCGAGAAAACTTTCAATCT 57.576 26.923 5.07 0.00 39.61 2.40
119 120 9.528018 AAAAATTGCGAGAAAACTTTCAATCTA 57.472 25.926 5.07 0.00 39.61 1.98
120 121 9.696917 AAAATTGCGAGAAAACTTTCAATCTAT 57.303 25.926 5.07 0.00 39.61 1.98
121 122 9.696917 AAATTGCGAGAAAACTTTCAATCTATT 57.303 25.926 5.07 0.40 39.61 1.73
122 123 8.902040 ATTGCGAGAAAACTTTCAATCTATTC 57.098 30.769 5.07 0.00 39.61 1.75
123 124 7.433708 TGCGAGAAAACTTTCAATCTATTCA 57.566 32.000 5.07 0.00 39.61 2.57
124 125 8.044060 TGCGAGAAAACTTTCAATCTATTCAT 57.956 30.769 5.07 0.00 39.61 2.57
125 126 8.177663 TGCGAGAAAACTTTCAATCTATTCATC 58.822 33.333 5.07 0.00 39.61 2.92
126 127 8.177663 GCGAGAAAACTTTCAATCTATTCATCA 58.822 33.333 5.07 0.00 39.61 3.07
132 133 9.903682 AAACTTTCAATCTATTCATCAACTGTG 57.096 29.630 0.00 0.00 0.00 3.66
133 134 8.853077 ACTTTCAATCTATTCATCAACTGTGA 57.147 30.769 0.00 0.00 38.41 3.58
134 135 9.288576 ACTTTCAATCTATTCATCAACTGTGAA 57.711 29.630 0.00 0.00 39.65 3.18
135 136 9.770503 CTTTCAATCTATTCATCAACTGTGAAG 57.229 33.333 0.00 0.00 38.81 3.02
136 137 7.854557 TCAATCTATTCATCAACTGTGAAGG 57.145 36.000 0.00 0.00 38.81 3.46
137 138 7.397221 TCAATCTATTCATCAACTGTGAAGGT 58.603 34.615 0.00 0.00 38.81 3.50
138 139 8.539544 TCAATCTATTCATCAACTGTGAAGGTA 58.460 33.333 0.00 0.00 38.81 3.08
139 140 8.824781 CAATCTATTCATCAACTGTGAAGGTAG 58.175 37.037 0.00 0.00 38.81 3.18
140 141 7.482169 TCTATTCATCAACTGTGAAGGTAGT 57.518 36.000 0.00 0.00 38.81 2.73
141 142 8.589701 TCTATTCATCAACTGTGAAGGTAGTA 57.410 34.615 0.00 0.00 38.81 1.82
142 143 8.467598 TCTATTCATCAACTGTGAAGGTAGTAC 58.532 37.037 0.00 0.00 38.81 2.73
143 144 6.413783 TTCATCAACTGTGAAGGTAGTACA 57.586 37.500 2.06 0.00 37.30 2.90
144 145 6.413783 TCATCAACTGTGAAGGTAGTACAA 57.586 37.500 2.06 0.00 37.30 2.41
145 146 6.822442 TCATCAACTGTGAAGGTAGTACAAA 58.178 36.000 2.06 0.00 37.30 2.83
146 147 6.929049 TCATCAACTGTGAAGGTAGTACAAAG 59.071 38.462 2.06 0.00 37.30 2.77
147 148 6.474140 TCAACTGTGAAGGTAGTACAAAGA 57.526 37.500 2.06 0.00 0.00 2.52
148 149 6.880484 TCAACTGTGAAGGTAGTACAAAGAA 58.120 36.000 2.06 0.00 0.00 2.52
149 150 6.759827 TCAACTGTGAAGGTAGTACAAAGAAC 59.240 38.462 2.06 0.00 0.00 3.01
150 151 6.229936 ACTGTGAAGGTAGTACAAAGAACA 57.770 37.500 2.06 0.00 0.00 3.18
151 152 6.047231 ACTGTGAAGGTAGTACAAAGAACAC 58.953 40.000 2.06 0.00 0.00 3.32
152 153 6.127140 ACTGTGAAGGTAGTACAAAGAACACT 60.127 38.462 2.06 0.00 0.00 3.55
153 154 7.069085 ACTGTGAAGGTAGTACAAAGAACACTA 59.931 37.037 2.06 0.00 0.00 2.74
154 155 7.431249 TGTGAAGGTAGTACAAAGAACACTAG 58.569 38.462 2.06 0.00 0.00 2.57
155 156 7.286087 TGTGAAGGTAGTACAAAGAACACTAGA 59.714 37.037 2.06 0.00 0.00 2.43
156 157 8.139989 GTGAAGGTAGTACAAAGAACACTAGAA 58.860 37.037 2.06 0.00 0.00 2.10
157 158 8.358148 TGAAGGTAGTACAAAGAACACTAGAAG 58.642 37.037 2.06 0.00 0.00 2.85
158 159 7.836479 AGGTAGTACAAAGAACACTAGAAGT 57.164 36.000 2.06 0.00 0.00 3.01
159 160 8.930846 AGGTAGTACAAAGAACACTAGAAGTA 57.069 34.615 2.06 0.00 0.00 2.24
160 161 9.359653 AGGTAGTACAAAGAACACTAGAAGTAA 57.640 33.333 2.06 0.00 0.00 2.24
161 162 9.971922 GGTAGTACAAAGAACACTAGAAGTAAA 57.028 33.333 2.06 0.00 0.00 2.01
174 175 9.449719 ACACTAGAAGTAAAATTTACATCCAGG 57.550 33.333 17.00 9.72 0.00 4.45
175 176 9.449719 CACTAGAAGTAAAATTTACATCCAGGT 57.550 33.333 17.00 10.50 0.00 4.00
176 177 9.668497 ACTAGAAGTAAAATTTACATCCAGGTC 57.332 33.333 17.00 4.09 0.00 3.85
177 178 7.939784 AGAAGTAAAATTTACATCCAGGTCC 57.060 36.000 17.00 0.00 0.00 4.46
178 179 6.598064 AGAAGTAAAATTTACATCCAGGTCCG 59.402 38.462 17.00 0.00 0.00 4.79
179 180 5.812286 AGTAAAATTTACATCCAGGTCCGT 58.188 37.500 17.00 0.00 0.00 4.69
180 181 6.949715 AGTAAAATTTACATCCAGGTCCGTA 58.050 36.000 17.00 0.00 0.00 4.02
181 182 7.046033 AGTAAAATTTACATCCAGGTCCGTAG 58.954 38.462 17.00 0.00 0.00 3.51
182 183 5.687166 AAATTTACATCCAGGTCCGTAGA 57.313 39.130 0.00 0.00 0.00 2.59
183 184 4.667519 ATTTACATCCAGGTCCGTAGAC 57.332 45.455 0.00 0.00 42.73 2.59
192 193 2.877975 GTCCGTAGACCACCTAGCA 58.122 57.895 0.00 0.00 37.00 3.49
193 194 1.180029 GTCCGTAGACCACCTAGCAA 58.820 55.000 0.00 0.00 37.00 3.91
194 195 1.755380 GTCCGTAGACCACCTAGCAAT 59.245 52.381 0.00 0.00 37.00 3.56
195 196 1.754803 TCCGTAGACCACCTAGCAATG 59.245 52.381 0.00 0.00 0.00 2.82
196 197 1.754803 CCGTAGACCACCTAGCAATGA 59.245 52.381 0.00 0.00 0.00 2.57
197 198 2.481449 CCGTAGACCACCTAGCAATGAC 60.481 54.545 0.00 0.00 0.00 3.06
198 199 2.427453 CGTAGACCACCTAGCAATGACT 59.573 50.000 0.00 0.00 0.00 3.41
199 200 3.630769 CGTAGACCACCTAGCAATGACTA 59.369 47.826 0.00 0.00 0.00 2.59
200 201 4.497674 CGTAGACCACCTAGCAATGACTAC 60.498 50.000 0.00 0.00 0.00 2.73
201 202 3.441101 AGACCACCTAGCAATGACTACA 58.559 45.455 0.00 0.00 0.00 2.74
202 203 4.033709 AGACCACCTAGCAATGACTACAT 58.966 43.478 0.00 0.00 38.50 2.29
203 204 4.122776 GACCACCTAGCAATGACTACATG 58.877 47.826 0.00 0.00 36.79 3.21
204 205 2.874701 CCACCTAGCAATGACTACATGC 59.125 50.000 0.00 0.00 36.79 4.06
205 206 3.534554 CACCTAGCAATGACTACATGCA 58.465 45.455 0.00 0.00 36.79 3.96
206 207 3.310774 CACCTAGCAATGACTACATGCAC 59.689 47.826 0.00 0.00 36.79 4.57
207 208 3.198635 ACCTAGCAATGACTACATGCACT 59.801 43.478 0.00 0.00 36.79 4.40
208 209 3.558829 CCTAGCAATGACTACATGCACTG 59.441 47.826 0.00 0.00 36.79 3.66
209 210 2.362736 AGCAATGACTACATGCACTGG 58.637 47.619 0.00 0.00 36.79 4.00
210 211 2.026915 AGCAATGACTACATGCACTGGA 60.027 45.455 0.00 0.00 36.79 3.86
211 212 2.353889 GCAATGACTACATGCACTGGAG 59.646 50.000 6.78 6.78 42.13 3.86
212 213 2.322355 ATGACTACATGCACTGGAGC 57.678 50.000 7.92 3.40 39.74 4.70
213 214 0.108662 TGACTACATGCACTGGAGCG 60.109 55.000 7.92 0.00 39.74 5.03
214 215 0.173481 GACTACATGCACTGGAGCGA 59.827 55.000 7.92 0.00 39.74 4.93
215 216 0.608130 ACTACATGCACTGGAGCGAA 59.392 50.000 7.92 0.00 39.74 4.70
216 217 1.002366 CTACATGCACTGGAGCGAAC 58.998 55.000 0.00 0.00 37.31 3.95
217 218 0.391130 TACATGCACTGGAGCGAACC 60.391 55.000 0.00 0.00 37.31 3.62
218 219 2.434884 ATGCACTGGAGCGAACCG 60.435 61.111 0.00 0.00 37.31 4.44
219 220 2.942796 ATGCACTGGAGCGAACCGA 61.943 57.895 0.00 0.00 37.31 4.69
220 221 2.357034 GCACTGGAGCGAACCGAA 60.357 61.111 0.00 0.00 0.00 4.30
221 222 2.383527 GCACTGGAGCGAACCGAAG 61.384 63.158 0.00 0.00 0.00 3.79
240 241 3.545481 CGCACCGCTGTCATCGTC 61.545 66.667 0.00 0.00 0.00 4.20
241 242 2.125912 GCACCGCTGTCATCGTCT 60.126 61.111 0.00 0.00 0.00 4.18
242 243 2.161486 GCACCGCTGTCATCGTCTC 61.161 63.158 0.00 0.00 0.00 3.36
243 244 1.508545 CACCGCTGTCATCGTCTCT 59.491 57.895 0.00 0.00 0.00 3.10
244 245 0.524392 CACCGCTGTCATCGTCTCTC 60.524 60.000 0.00 0.00 0.00 3.20
245 246 1.297967 CCGCTGTCATCGTCTCTCG 60.298 63.158 0.00 0.00 41.41 4.04
246 247 1.936880 CGCTGTCATCGTCTCTCGC 60.937 63.158 0.00 0.00 39.67 5.03
247 248 1.431440 GCTGTCATCGTCTCTCGCT 59.569 57.895 0.00 0.00 39.67 4.93
248 249 0.591236 GCTGTCATCGTCTCTCGCTC 60.591 60.000 0.00 0.00 39.67 5.03
249 250 0.729690 CTGTCATCGTCTCTCGCTCA 59.270 55.000 0.00 0.00 39.67 4.26
250 251 0.448197 TGTCATCGTCTCTCGCTCAC 59.552 55.000 0.00 0.00 39.67 3.51
251 252 0.248296 GTCATCGTCTCTCGCTCACC 60.248 60.000 0.00 0.00 39.67 4.02
252 253 1.297967 CATCGTCTCTCGCTCACCG 60.298 63.158 0.00 0.00 39.67 4.94
253 254 2.473760 ATCGTCTCTCGCTCACCGG 61.474 63.158 0.00 0.00 39.67 5.28
254 255 2.871216 ATCGTCTCTCGCTCACCGGA 62.871 60.000 9.46 0.00 39.67 5.14
255 256 2.795297 GTCTCTCGCTCACCGGAG 59.205 66.667 9.46 0.00 44.33 4.63
256 257 2.041686 GTCTCTCGCTCACCGGAGT 61.042 63.158 9.46 0.00 43.37 3.85
257 258 1.745864 TCTCTCGCTCACCGGAGTC 60.746 63.158 9.46 0.00 43.37 3.36
258 259 3.102107 CTCTCGCTCACCGGAGTCG 62.102 68.421 9.46 9.26 43.37 4.18
268 269 2.030562 CGGAGTCGGGCAAACACT 59.969 61.111 0.00 0.00 0.00 3.55
269 270 2.317609 CGGAGTCGGGCAAACACTG 61.318 63.158 0.00 0.00 0.00 3.66
270 271 1.227853 GGAGTCGGGCAAACACTGT 60.228 57.895 0.00 0.00 0.00 3.55
271 272 0.818040 GGAGTCGGGCAAACACTGTT 60.818 55.000 0.00 0.00 0.00 3.16
272 273 0.307760 GAGTCGGGCAAACACTGTTG 59.692 55.000 0.00 0.00 0.00 3.33
273 274 0.393808 AGTCGGGCAAACACTGTTGT 60.394 50.000 0.00 0.00 37.67 3.32
274 275 1.134340 AGTCGGGCAAACACTGTTGTA 60.134 47.619 0.00 0.00 33.55 2.41
275 276 1.263217 GTCGGGCAAACACTGTTGTAG 59.737 52.381 0.00 0.00 33.55 2.74
276 277 1.134340 TCGGGCAAACACTGTTGTAGT 60.134 47.619 0.00 0.00 41.36 2.73
277 278 2.102757 TCGGGCAAACACTGTTGTAGTA 59.897 45.455 0.00 0.00 37.60 1.82
278 279 2.478894 CGGGCAAACACTGTTGTAGTAG 59.521 50.000 0.00 0.00 37.60 2.57
279 280 3.735591 GGGCAAACACTGTTGTAGTAGA 58.264 45.455 0.00 0.00 37.60 2.59
280 281 3.497262 GGGCAAACACTGTTGTAGTAGAC 59.503 47.826 0.00 0.00 37.60 2.59
281 282 4.124238 GGCAAACACTGTTGTAGTAGACA 58.876 43.478 0.00 0.00 37.60 3.41
282 283 4.211374 GGCAAACACTGTTGTAGTAGACAG 59.789 45.833 10.59 10.59 46.65 3.51
288 289 4.761235 CTGTTGTAGTAGACAGTCGGAA 57.239 45.455 0.00 0.00 39.88 4.30
289 290 5.117355 CTGTTGTAGTAGACAGTCGGAAA 57.883 43.478 0.00 0.00 39.88 3.13
290 291 5.117355 TGTTGTAGTAGACAGTCGGAAAG 57.883 43.478 0.00 0.00 39.88 2.62
291 292 4.581824 TGTTGTAGTAGACAGTCGGAAAGT 59.418 41.667 0.00 0.00 39.88 2.66
292 293 5.152804 GTTGTAGTAGACAGTCGGAAAGTC 58.847 45.833 0.00 3.60 39.88 3.01
293 294 4.392047 TGTAGTAGACAGTCGGAAAGTCA 58.608 43.478 11.98 0.00 34.80 3.41
294 295 5.008331 TGTAGTAGACAGTCGGAAAGTCAT 58.992 41.667 11.98 2.86 34.80 3.06
295 296 4.705337 AGTAGACAGTCGGAAAGTCATC 57.295 45.455 11.98 5.94 34.80 2.92
296 297 2.638556 AGACAGTCGGAAAGTCATCG 57.361 50.000 11.98 0.00 34.80 3.84
297 298 1.887198 AGACAGTCGGAAAGTCATCGT 59.113 47.619 11.98 0.00 34.80 3.73
298 299 1.986378 GACAGTCGGAAAGTCATCGTG 59.014 52.381 6.29 0.00 32.68 4.35
299 300 0.716108 CAGTCGGAAAGTCATCGTGC 59.284 55.000 0.00 0.00 0.00 5.34
300 301 0.603569 AGTCGGAAAGTCATCGTGCT 59.396 50.000 0.00 0.00 0.00 4.40
301 302 1.816835 AGTCGGAAAGTCATCGTGCTA 59.183 47.619 0.00 0.00 0.00 3.49
302 303 2.230508 AGTCGGAAAGTCATCGTGCTAA 59.769 45.455 0.00 0.00 0.00 3.09
303 304 2.599082 GTCGGAAAGTCATCGTGCTAAG 59.401 50.000 0.00 0.00 0.00 2.18
304 305 1.927174 CGGAAAGTCATCGTGCTAAGG 59.073 52.381 0.00 0.00 0.00 2.69
305 306 1.666189 GGAAAGTCATCGTGCTAAGGC 59.334 52.381 0.00 0.00 39.26 4.35
316 317 1.879575 TGCTAAGGCACCATAGGACT 58.120 50.000 1.46 0.00 44.28 3.85
317 318 3.040655 TGCTAAGGCACCATAGGACTA 57.959 47.619 1.46 0.00 44.28 2.59
318 319 2.965831 TGCTAAGGCACCATAGGACTAG 59.034 50.000 1.46 0.00 44.28 2.57
319 320 2.289133 GCTAAGGCACCATAGGACTAGC 60.289 54.545 1.46 0.00 38.54 3.42
320 321 0.753262 AAGGCACCATAGGACTAGCG 59.247 55.000 0.00 0.00 0.00 4.26
321 322 1.301009 GGCACCATAGGACTAGCGC 60.301 63.158 0.00 0.00 0.00 5.92
322 323 1.441729 GCACCATAGGACTAGCGCA 59.558 57.895 11.47 0.00 0.00 6.09
323 324 0.034059 GCACCATAGGACTAGCGCAT 59.966 55.000 11.47 0.00 0.00 4.73
324 325 1.937108 GCACCATAGGACTAGCGCATC 60.937 57.143 11.47 3.64 0.00 3.91
325 326 1.341209 CACCATAGGACTAGCGCATCA 59.659 52.381 11.47 0.00 0.00 3.07
326 327 1.615883 ACCATAGGACTAGCGCATCAG 59.384 52.381 11.47 6.11 0.00 2.90
327 328 1.889170 CCATAGGACTAGCGCATCAGA 59.111 52.381 11.47 0.00 0.00 3.27
328 329 2.297315 CCATAGGACTAGCGCATCAGAA 59.703 50.000 11.47 0.00 0.00 3.02
329 330 3.312828 CATAGGACTAGCGCATCAGAAC 58.687 50.000 11.47 2.55 0.00 3.01
330 331 1.186200 AGGACTAGCGCATCAGAACA 58.814 50.000 11.47 0.00 0.00 3.18
331 332 1.135915 AGGACTAGCGCATCAGAACAG 59.864 52.381 11.47 0.00 0.00 3.16
332 333 1.134965 GGACTAGCGCATCAGAACAGT 60.135 52.381 11.47 0.00 0.00 3.55
333 334 2.099263 GGACTAGCGCATCAGAACAGTA 59.901 50.000 11.47 0.00 0.00 2.74
334 335 3.428999 GGACTAGCGCATCAGAACAGTAA 60.429 47.826 11.47 0.00 0.00 2.24
335 336 3.512680 ACTAGCGCATCAGAACAGTAAC 58.487 45.455 11.47 0.00 0.00 2.50
336 337 1.726853 AGCGCATCAGAACAGTAACC 58.273 50.000 11.47 0.00 0.00 2.85
337 338 0.370273 GCGCATCAGAACAGTAACCG 59.630 55.000 0.30 0.00 0.00 4.44
338 339 1.710013 CGCATCAGAACAGTAACCGT 58.290 50.000 0.00 0.00 0.00 4.83
339 340 1.654105 CGCATCAGAACAGTAACCGTC 59.346 52.381 0.00 0.00 0.00 4.79
340 341 1.654105 GCATCAGAACAGTAACCGTCG 59.346 52.381 0.00 0.00 0.00 5.12
341 342 1.654105 CATCAGAACAGTAACCGTCGC 59.346 52.381 0.00 0.00 0.00 5.19
342 343 0.038892 TCAGAACAGTAACCGTCGCC 60.039 55.000 0.00 0.00 0.00 5.54
343 344 1.080974 AGAACAGTAACCGTCGCCG 60.081 57.895 0.00 0.00 0.00 6.46
344 345 1.081242 GAACAGTAACCGTCGCCGA 60.081 57.895 0.00 0.00 35.63 5.54
345 346 0.457337 GAACAGTAACCGTCGCCGAT 60.457 55.000 0.00 0.00 35.63 4.18
346 347 0.734942 AACAGTAACCGTCGCCGATG 60.735 55.000 0.00 0.00 35.63 3.84
347 348 1.138036 CAGTAACCGTCGCCGATGA 59.862 57.895 8.12 0.00 35.63 2.92
348 349 0.457166 CAGTAACCGTCGCCGATGAA 60.457 55.000 8.12 0.00 35.63 2.57
349 350 0.179145 AGTAACCGTCGCCGATGAAG 60.179 55.000 8.12 0.00 35.63 3.02
350 351 0.179156 GTAACCGTCGCCGATGAAGA 60.179 55.000 8.12 0.00 35.63 2.87
351 352 0.099968 TAACCGTCGCCGATGAAGAG 59.900 55.000 8.12 0.00 35.63 2.85
352 353 1.592400 AACCGTCGCCGATGAAGAGA 61.592 55.000 8.12 0.00 35.63 3.10
353 354 1.138883 CCGTCGCCGATGAAGAGAA 59.861 57.895 8.12 0.00 35.63 2.87
354 355 0.457853 CCGTCGCCGATGAAGAGAAA 60.458 55.000 8.12 0.00 35.63 2.52
355 356 0.640768 CGTCGCCGATGAAGAGAAAC 59.359 55.000 0.00 0.00 35.63 2.78
356 357 0.640768 GTCGCCGATGAAGAGAAACG 59.359 55.000 0.00 0.00 0.00 3.60
357 358 0.242825 TCGCCGATGAAGAGAAACGT 59.757 50.000 0.00 0.00 0.00 3.99
358 359 1.469703 TCGCCGATGAAGAGAAACGTA 59.530 47.619 0.00 0.00 0.00 3.57
359 360 1.846782 CGCCGATGAAGAGAAACGTAG 59.153 52.381 0.00 0.00 0.00 3.51
360 361 2.477357 CGCCGATGAAGAGAAACGTAGA 60.477 50.000 0.00 0.00 0.00 2.59
361 362 3.707793 GCCGATGAAGAGAAACGTAGAT 58.292 45.455 0.00 0.00 0.00 1.98
362 363 3.731717 GCCGATGAAGAGAAACGTAGATC 59.268 47.826 0.00 0.00 0.00 2.75
363 364 3.969352 CCGATGAAGAGAAACGTAGATCG 59.031 47.826 0.00 0.00 46.00 3.69
364 365 3.969352 CGATGAAGAGAAACGTAGATCGG 59.031 47.826 0.00 0.00 44.69 4.18
365 366 4.260661 CGATGAAGAGAAACGTAGATCGGA 60.261 45.833 0.00 0.00 44.69 4.55
366 367 5.578005 ATGAAGAGAAACGTAGATCGGAA 57.422 39.130 0.00 0.00 44.69 4.30
367 368 4.982999 TGAAGAGAAACGTAGATCGGAAG 58.017 43.478 0.00 0.00 44.69 3.46
368 369 4.458295 TGAAGAGAAACGTAGATCGGAAGT 59.542 41.667 0.00 0.00 44.69 3.01
369 370 4.619437 AGAGAAACGTAGATCGGAAGTC 57.381 45.455 0.00 0.00 44.69 3.01
370 371 4.008330 AGAGAAACGTAGATCGGAAGTCA 58.992 43.478 0.00 0.00 44.69 3.41
371 372 4.458295 AGAGAAACGTAGATCGGAAGTCAA 59.542 41.667 0.00 0.00 44.69 3.18
372 373 5.048224 AGAGAAACGTAGATCGGAAGTCAAA 60.048 40.000 0.00 0.00 44.69 2.69
373 374 5.535333 AGAAACGTAGATCGGAAGTCAAAA 58.465 37.500 0.00 0.00 44.69 2.44
374 375 5.987347 AGAAACGTAGATCGGAAGTCAAAAA 59.013 36.000 0.00 0.00 44.69 1.94
395 396 6.803154 AAAATTAAAGAAGAGGGACTGACG 57.197 37.500 0.00 0.00 41.55 4.35
396 397 5.740290 AATTAAAGAAGAGGGACTGACGA 57.260 39.130 0.00 0.00 41.55 4.20
397 398 4.516365 TTAAAGAAGAGGGACTGACGAC 57.484 45.455 0.00 0.00 41.55 4.34
398 399 2.296073 AAGAAGAGGGACTGACGACT 57.704 50.000 0.00 0.00 41.55 4.18
399 400 2.296073 AGAAGAGGGACTGACGACTT 57.704 50.000 0.00 0.00 41.55 3.01
400 401 1.889829 AGAAGAGGGACTGACGACTTG 59.110 52.381 0.00 0.00 41.55 3.16
401 402 1.614413 GAAGAGGGACTGACGACTTGT 59.386 52.381 0.00 0.00 41.55 3.16
402 403 0.962489 AGAGGGACTGACGACTTGTG 59.038 55.000 0.00 0.00 41.55 3.33
403 404 0.674534 GAGGGACTGACGACTTGTGT 59.325 55.000 0.00 0.00 41.55 3.72
404 405 0.674534 AGGGACTGACGACTTGTGTC 59.325 55.000 0.00 0.00 37.18 3.67
405 406 0.387929 GGGACTGACGACTTGTGTCA 59.612 55.000 0.00 0.00 43.68 3.58
406 407 1.488527 GGACTGACGACTTGTGTCAC 58.511 55.000 0.00 0.00 41.20 3.67
407 408 1.067212 GGACTGACGACTTGTGTCACT 59.933 52.381 4.27 0.00 41.20 3.41
408 409 2.386249 GACTGACGACTTGTGTCACTC 58.614 52.381 4.27 0.00 41.20 3.51
409 410 1.749063 ACTGACGACTTGTGTCACTCA 59.251 47.619 4.27 0.00 41.20 3.41
410 411 2.165641 ACTGACGACTTGTGTCACTCAA 59.834 45.455 4.27 0.00 41.20 3.02
411 412 3.181475 ACTGACGACTTGTGTCACTCAAT 60.181 43.478 4.27 0.00 41.20 2.57
412 413 3.792401 TGACGACTTGTGTCACTCAATT 58.208 40.909 4.27 0.00 41.20 2.32
413 414 3.555547 TGACGACTTGTGTCACTCAATTG 59.444 43.478 4.27 0.00 41.20 2.32
414 415 2.872245 ACGACTTGTGTCACTCAATTGG 59.128 45.455 5.42 0.00 43.06 3.16
415 416 3.130633 CGACTTGTGTCACTCAATTGGA 58.869 45.455 5.42 0.00 43.06 3.53
416 417 3.059597 CGACTTGTGTCACTCAATTGGAC 60.060 47.826 5.42 6.02 43.06 4.02
417 418 2.872245 ACTTGTGTCACTCAATTGGACG 59.128 45.455 5.42 0.00 34.32 4.79
418 419 1.877637 TGTGTCACTCAATTGGACGG 58.122 50.000 5.42 0.00 34.32 4.79
419 420 0.517316 GTGTCACTCAATTGGACGGC 59.483 55.000 5.42 0.00 34.32 5.68
420 421 0.396435 TGTCACTCAATTGGACGGCT 59.604 50.000 5.42 0.00 34.32 5.52
421 422 1.079503 GTCACTCAATTGGACGGCTC 58.920 55.000 5.42 0.00 0.00 4.70
422 423 0.389817 TCACTCAATTGGACGGCTCG 60.390 55.000 5.42 0.00 0.00 5.03
423 424 1.741770 ACTCAATTGGACGGCTCGC 60.742 57.895 5.42 0.00 0.00 5.03
424 425 1.448540 CTCAATTGGACGGCTCGCT 60.449 57.895 5.42 0.00 0.00 4.93
425 426 0.179111 CTCAATTGGACGGCTCGCTA 60.179 55.000 5.42 0.00 0.00 4.26
426 427 0.179111 TCAATTGGACGGCTCGCTAG 60.179 55.000 5.42 0.00 0.00 3.42
427 428 1.144057 AATTGGACGGCTCGCTAGG 59.856 57.895 0.00 0.00 0.00 3.02
428 429 2.925162 AATTGGACGGCTCGCTAGGC 62.925 60.000 1.15 1.15 44.69 3.93
440 441 2.993539 GCTAGGCGGTGGATCTTTC 58.006 57.895 0.00 0.00 0.00 2.62
441 442 0.533085 GCTAGGCGGTGGATCTTTCC 60.533 60.000 0.00 0.00 42.94 3.13
442 443 0.106894 CTAGGCGGTGGATCTTTCCC 59.893 60.000 0.00 0.00 41.83 3.97
443 444 1.342672 TAGGCGGTGGATCTTTCCCC 61.343 60.000 0.00 0.00 41.83 4.81
445 446 2.189521 CGGTGGATCTTTCCCCGG 59.810 66.667 0.00 0.00 45.06 5.73
446 447 2.124278 GGTGGATCTTTCCCCGGC 60.124 66.667 0.00 0.00 41.83 6.13
447 448 2.513897 GTGGATCTTTCCCCGGCG 60.514 66.667 0.00 0.00 41.83 6.46
448 449 4.483243 TGGATCTTTCCCCGGCGC 62.483 66.667 0.00 0.00 41.83 6.53
471 472 4.261888 CGTAGCACGCCCCATATC 57.738 61.111 0.00 0.00 33.65 1.63
472 473 1.666011 CGTAGCACGCCCCATATCT 59.334 57.895 0.00 0.00 33.65 1.98
473 474 0.388649 CGTAGCACGCCCCATATCTC 60.389 60.000 0.00 0.00 33.65 2.75
474 475 0.969894 GTAGCACGCCCCATATCTCT 59.030 55.000 0.00 0.00 0.00 3.10
475 476 2.168496 GTAGCACGCCCCATATCTCTA 58.832 52.381 0.00 0.00 0.00 2.43
476 477 0.969894 AGCACGCCCCATATCTCTAC 59.030 55.000 0.00 0.00 0.00 2.59
477 478 0.969894 GCACGCCCCATATCTCTACT 59.030 55.000 0.00 0.00 0.00 2.57
478 479 1.344763 GCACGCCCCATATCTCTACTT 59.655 52.381 0.00 0.00 0.00 2.24
479 480 2.610727 GCACGCCCCATATCTCTACTTC 60.611 54.545 0.00 0.00 0.00 3.01
480 481 2.894126 CACGCCCCATATCTCTACTTCT 59.106 50.000 0.00 0.00 0.00 2.85
481 482 3.057174 CACGCCCCATATCTCTACTTCTC 60.057 52.174 0.00 0.00 0.00 2.87
482 483 3.181427 ACGCCCCATATCTCTACTTCTCT 60.181 47.826 0.00 0.00 0.00 3.10
483 484 3.829601 CGCCCCATATCTCTACTTCTCTT 59.170 47.826 0.00 0.00 0.00 2.85
484 485 5.010933 CGCCCCATATCTCTACTTCTCTTA 58.989 45.833 0.00 0.00 0.00 2.10
485 486 5.654650 CGCCCCATATCTCTACTTCTCTTAT 59.345 44.000 0.00 0.00 0.00 1.73
486 487 6.829298 CGCCCCATATCTCTACTTCTCTTATA 59.171 42.308 0.00 0.00 0.00 0.98
487 488 7.201750 CGCCCCATATCTCTACTTCTCTTATAC 60.202 44.444 0.00 0.00 0.00 1.47
488 489 7.837187 GCCCCATATCTCTACTTCTCTTATACT 59.163 40.741 0.00 0.00 0.00 2.12
522 523 9.733556 AAAAAGTAAGGTTTTCATTTCACCTTT 57.266 25.926 8.08 0.00 46.85 3.11
523 524 8.942338 AAAGTAAGGTTTTCATTTCACCTTTC 57.058 30.769 8.08 3.81 46.85 2.62
524 525 7.898014 AGTAAGGTTTTCATTTCACCTTTCT 57.102 32.000 8.08 5.97 46.85 2.52
525 526 8.306313 AGTAAGGTTTTCATTTCACCTTTCTT 57.694 30.769 8.08 0.00 46.85 2.52
526 527 8.414003 AGTAAGGTTTTCATTTCACCTTTCTTC 58.586 33.333 8.08 0.00 46.85 2.87
527 528 6.161855 AGGTTTTCATTTCACCTTTCTTCC 57.838 37.500 0.00 0.00 37.70 3.46
528 529 5.070446 AGGTTTTCATTTCACCTTTCTTCCC 59.930 40.000 0.00 0.00 37.70 3.97
529 530 5.163353 GGTTTTCATTTCACCTTTCTTCCCA 60.163 40.000 0.00 0.00 0.00 4.37
530 531 5.529581 TTTCATTTCACCTTTCTTCCCAC 57.470 39.130 0.00 0.00 0.00 4.61
531 532 3.496331 TCATTTCACCTTTCTTCCCACC 58.504 45.455 0.00 0.00 0.00 4.61
532 533 3.117322 TCATTTCACCTTTCTTCCCACCA 60.117 43.478 0.00 0.00 0.00 4.17
533 534 2.358322 TTCACCTTTCTTCCCACCAC 57.642 50.000 0.00 0.00 0.00 4.16
534 535 0.476771 TCACCTTTCTTCCCACCACC 59.523 55.000 0.00 0.00 0.00 4.61
535 536 0.539669 CACCTTTCTTCCCACCACCC 60.540 60.000 0.00 0.00 0.00 4.61
536 537 0.701310 ACCTTTCTTCCCACCACCCT 60.701 55.000 0.00 0.00 0.00 4.34
537 538 0.482887 CCTTTCTTCCCACCACCCTT 59.517 55.000 0.00 0.00 0.00 3.95
538 539 1.547901 CCTTTCTTCCCACCACCCTTC 60.548 57.143 0.00 0.00 0.00 3.46
539 540 0.109723 TTTCTTCCCACCACCCTTCG 59.890 55.000 0.00 0.00 0.00 3.79
540 541 1.057851 TTCTTCCCACCACCCTTCGT 61.058 55.000 0.00 0.00 0.00 3.85
541 542 1.003718 CTTCCCACCACCCTTCGTC 60.004 63.158 0.00 0.00 0.00 4.20
542 543 2.465055 CTTCCCACCACCCTTCGTCC 62.465 65.000 0.00 0.00 0.00 4.79
543 544 3.246112 CCCACCACCCTTCGTCCA 61.246 66.667 0.00 0.00 0.00 4.02
544 545 2.824880 CCCACCACCCTTCGTCCAA 61.825 63.158 0.00 0.00 0.00 3.53
545 546 1.599797 CCACCACCCTTCGTCCAAC 60.600 63.158 0.00 0.00 0.00 3.77
546 547 1.599797 CACCACCCTTCGTCCAACC 60.600 63.158 0.00 0.00 0.00 3.77
547 548 1.768888 ACCACCCTTCGTCCAACCT 60.769 57.895 0.00 0.00 0.00 3.50
548 549 1.350310 ACCACCCTTCGTCCAACCTT 61.350 55.000 0.00 0.00 0.00 3.50
549 550 0.179001 CCACCCTTCGTCCAACCTTT 60.179 55.000 0.00 0.00 0.00 3.11
550 551 1.235724 CACCCTTCGTCCAACCTTTC 58.764 55.000 0.00 0.00 0.00 2.62
551 552 0.841289 ACCCTTCGTCCAACCTTTCA 59.159 50.000 0.00 0.00 0.00 2.69
552 553 1.423921 ACCCTTCGTCCAACCTTTCAT 59.576 47.619 0.00 0.00 0.00 2.57
553 554 1.812571 CCCTTCGTCCAACCTTTCATG 59.187 52.381 0.00 0.00 0.00 3.07
554 555 2.504367 CCTTCGTCCAACCTTTCATGT 58.496 47.619 0.00 0.00 0.00 3.21
555 556 2.226437 CCTTCGTCCAACCTTTCATGTG 59.774 50.000 0.00 0.00 0.00 3.21
556 557 2.920724 TCGTCCAACCTTTCATGTGA 57.079 45.000 0.00 0.00 0.00 3.58
557 558 3.417069 TCGTCCAACCTTTCATGTGAT 57.583 42.857 0.00 0.00 0.00 3.06
558 559 4.545208 TCGTCCAACCTTTCATGTGATA 57.455 40.909 0.00 0.00 0.00 2.15
559 560 4.900684 TCGTCCAACCTTTCATGTGATAA 58.099 39.130 0.00 0.00 0.00 1.75
560 561 5.496556 TCGTCCAACCTTTCATGTGATAAT 58.503 37.500 0.00 0.00 0.00 1.28
561 562 5.584649 TCGTCCAACCTTTCATGTGATAATC 59.415 40.000 0.00 0.00 0.00 1.75
562 563 5.353956 CGTCCAACCTTTCATGTGATAATCA 59.646 40.000 0.00 0.00 0.00 2.57
563 564 6.128035 CGTCCAACCTTTCATGTGATAATCAA 60.128 38.462 0.00 0.00 0.00 2.57
564 565 7.415541 CGTCCAACCTTTCATGTGATAATCAAT 60.416 37.037 0.00 0.00 0.00 2.57
565 566 7.917505 GTCCAACCTTTCATGTGATAATCAATC 59.082 37.037 0.00 0.00 34.93 2.67
566 567 7.614974 TCCAACCTTTCATGTGATAATCAATCA 59.385 33.333 0.00 0.00 42.48 2.57
599 600 9.965824 TTTTCTTACTTTCTGAATCAATTCCAC 57.034 29.630 0.48 0.00 35.97 4.02
600 601 8.924511 TTCTTACTTTCTGAATCAATTCCACT 57.075 30.769 0.48 0.00 35.97 4.00
601 602 8.924511 TCTTACTTTCTGAATCAATTCCACTT 57.075 30.769 0.48 0.00 35.97 3.16
602 603 9.354673 TCTTACTTTCTGAATCAATTCCACTTT 57.645 29.630 0.48 0.00 35.97 2.66
715 716 7.881643 TGAACATTTATTTACACAATGGCAC 57.118 32.000 0.00 0.00 33.00 5.01
716 717 7.665690 TGAACATTTATTTACACAATGGCACT 58.334 30.769 0.00 0.00 33.00 4.40
717 718 8.797438 TGAACATTTATTTACACAATGGCACTA 58.203 29.630 0.00 0.00 33.00 2.74
718 719 9.801873 GAACATTTATTTACACAATGGCACTAT 57.198 29.630 0.00 0.00 33.00 2.12
726 727 7.929941 TTACACAATGGCACTATTATTGACA 57.070 32.000 3.47 0.00 36.09 3.58
727 728 6.441093 ACACAATGGCACTATTATTGACAG 57.559 37.500 3.47 0.00 34.74 3.51
728 729 5.357878 ACACAATGGCACTATTATTGACAGG 59.642 40.000 3.47 0.00 34.74 4.00
729 730 5.357878 CACAATGGCACTATTATTGACAGGT 59.642 40.000 3.47 0.00 34.74 4.00
730 731 6.542005 CACAATGGCACTATTATTGACAGGTA 59.458 38.462 3.47 0.00 34.74 3.08
731 732 7.066887 CACAATGGCACTATTATTGACAGGTAA 59.933 37.037 3.47 0.00 34.74 2.85
732 733 7.613801 ACAATGGCACTATTATTGACAGGTAAA 59.386 33.333 3.47 0.00 34.74 2.01
733 734 8.632679 CAATGGCACTATTATTGACAGGTAAAT 58.367 33.333 0.00 0.00 34.74 1.40
734 735 7.801716 TGGCACTATTATTGACAGGTAAATC 57.198 36.000 0.00 0.00 0.00 2.17
735 736 7.342581 TGGCACTATTATTGACAGGTAAATCA 58.657 34.615 0.00 0.00 0.00 2.57
736 737 7.282224 TGGCACTATTATTGACAGGTAAATCAC 59.718 37.037 0.00 0.00 0.00 3.06
737 738 7.282224 GGCACTATTATTGACAGGTAAATCACA 59.718 37.037 0.00 0.00 0.00 3.58
738 739 8.673711 GCACTATTATTGACAGGTAAATCACAA 58.326 33.333 0.00 0.00 0.00 3.33
740 741 8.893727 ACTATTATTGACAGGTAAATCACAAGC 58.106 33.333 0.00 0.00 0.00 4.01
741 742 7.944729 ATTATTGACAGGTAAATCACAAGCT 57.055 32.000 0.00 0.00 0.00 3.74
742 743 5.886960 ATTGACAGGTAAATCACAAGCTC 57.113 39.130 0.00 0.00 0.00 4.09
743 744 4.623932 TGACAGGTAAATCACAAGCTCT 57.376 40.909 0.00 0.00 0.00 4.09
744 745 4.569943 TGACAGGTAAATCACAAGCTCTC 58.430 43.478 0.00 0.00 0.00 3.20
745 746 3.935828 GACAGGTAAATCACAAGCTCTCC 59.064 47.826 0.00 0.00 0.00 3.71
746 747 3.274288 CAGGTAAATCACAAGCTCTCCC 58.726 50.000 0.00 0.00 0.00 4.30
747 748 2.093447 AGGTAAATCACAAGCTCTCCCG 60.093 50.000 0.00 0.00 0.00 5.14
748 749 2.354805 GGTAAATCACAAGCTCTCCCGT 60.355 50.000 0.00 0.00 0.00 5.28
749 750 2.568623 AAATCACAAGCTCTCCCGTT 57.431 45.000 0.00 0.00 0.00 4.44
750 751 3.695830 AAATCACAAGCTCTCCCGTTA 57.304 42.857 0.00 0.00 0.00 3.18
751 752 3.914426 AATCACAAGCTCTCCCGTTAT 57.086 42.857 0.00 0.00 0.00 1.89
752 753 5.353394 AAATCACAAGCTCTCCCGTTATA 57.647 39.130 0.00 0.00 0.00 0.98
753 754 5.353394 AATCACAAGCTCTCCCGTTATAA 57.647 39.130 0.00 0.00 0.00 0.98
754 755 4.119442 TCACAAGCTCTCCCGTTATAAC 57.881 45.455 5.47 5.47 0.00 1.89
765 766 2.990774 CGTTATAACGCACGAGCATT 57.009 45.000 23.72 0.00 46.06 3.56
767 768 4.624721 CGTTATAACGCACGAGCATTAT 57.375 40.909 23.72 10.76 46.06 1.28
768 769 5.001867 CGTTATAACGCACGAGCATTATT 57.998 39.130 23.72 0.00 46.06 1.40
769 770 5.064367 CGTTATAACGCACGAGCATTATTC 58.936 41.667 23.72 5.33 46.06 1.75
770 771 5.107989 CGTTATAACGCACGAGCATTATTCT 60.108 40.000 23.72 0.00 46.06 2.40
771 772 6.087159 CGTTATAACGCACGAGCATTATTCTA 59.913 38.462 23.72 0.00 46.06 2.10
772 773 7.437912 GTTATAACGCACGAGCATTATTCTAG 58.562 38.462 11.18 0.00 35.79 2.43
773 774 3.438297 ACGCACGAGCATTATTCTAGT 57.562 42.857 5.50 0.00 42.27 2.57
774 775 3.782046 ACGCACGAGCATTATTCTAGTT 58.218 40.909 5.50 0.00 42.27 2.24
775 776 4.181578 ACGCACGAGCATTATTCTAGTTT 58.818 39.130 5.50 0.00 42.27 2.66
776 777 4.630069 ACGCACGAGCATTATTCTAGTTTT 59.370 37.500 5.50 0.00 42.27 2.43
777 778 5.808540 ACGCACGAGCATTATTCTAGTTTTA 59.191 36.000 5.50 0.00 42.27 1.52
778 779 6.311935 ACGCACGAGCATTATTCTAGTTTTAA 59.688 34.615 5.50 0.00 42.27 1.52
779 780 7.011109 ACGCACGAGCATTATTCTAGTTTTAAT 59.989 33.333 5.50 0.00 42.27 1.40
780 781 8.484799 CGCACGAGCATTATTCTAGTTTTAATA 58.515 33.333 5.50 0.00 42.27 0.98
823 831 0.168788 AATTGCGCGTCAATGTCCAG 59.831 50.000 22.95 0.00 44.23 3.86
837 845 3.953712 TGTCCAGAGCGATGTTTTCTA 57.046 42.857 0.00 0.00 0.00 2.10
840 848 1.590238 CCAGAGCGATGTTTTCTAGCG 59.410 52.381 0.00 0.00 0.00 4.26
848 856 4.958563 GCGATGTTTTCTAGCGAAAGAATC 59.041 41.667 1.32 0.00 40.04 2.52
934 942 4.301505 GCCTTCGCCAAGTCATCA 57.698 55.556 0.00 0.00 0.00 3.07
935 943 2.093216 GCCTTCGCCAAGTCATCAG 58.907 57.895 0.00 0.00 0.00 2.90
941 964 4.215399 CCTTCGCCAAGTCATCAGTAAAAA 59.785 41.667 0.00 0.00 0.00 1.94
1137 1160 3.204827 GCACTGATCGCCGCCAAT 61.205 61.111 0.00 0.00 0.00 3.16
1155 1178 2.813908 GCGCTGGTGTACTTCCGG 60.814 66.667 0.00 0.00 34.70 5.14
1286 1310 1.222113 GGCTAGTGGAAGGTGCTCC 59.778 63.158 0.00 0.00 35.88 4.70
1349 1373 3.324713 CCCTAAGGCAGACAGGGG 58.675 66.667 4.42 0.00 44.66 4.79
1537 1561 0.255890 TTGAGCACCCTTATCCAGGC 59.744 55.000 0.00 0.00 42.29 4.85
1607 1631 3.039202 CTCCGGTTGCCGCATTGTC 62.039 63.158 0.00 0.00 46.86 3.18
1629 1653 3.006644 CGGGTTTAGCTAATACTCCCTCC 59.993 52.174 22.40 13.08 0.00 4.30
1632 1656 4.100653 GGTTTAGCTAATACTCCCTCCGTT 59.899 45.833 7.08 0.00 0.00 4.44
1635 1659 2.091222 AGCTAATACTCCCTCCGTTCCT 60.091 50.000 0.00 0.00 0.00 3.36
1639 1663 5.163374 GCTAATACTCCCTCCGTTCCTAAAA 60.163 44.000 0.00 0.00 0.00 1.52
1640 1664 5.767277 AATACTCCCTCCGTTCCTAAAAA 57.233 39.130 0.00 0.00 0.00 1.94
1641 1665 5.970501 ATACTCCCTCCGTTCCTAAAAAT 57.029 39.130 0.00 0.00 0.00 1.82
1642 1666 7.441903 AATACTCCCTCCGTTCCTAAAAATA 57.558 36.000 0.00 0.00 0.00 1.40
1643 1667 5.767277 ACTCCCTCCGTTCCTAAAAATAA 57.233 39.130 0.00 0.00 0.00 1.40
1649 1673 6.657966 CCCTCCGTTCCTAAAAATAAGTCTTT 59.342 38.462 0.00 0.00 0.00 2.52
1651 1675 7.174426 CCTCCGTTCCTAAAAATAAGTCTTTGT 59.826 37.037 0.00 0.00 0.00 2.83
1652 1676 9.211485 CTCCGTTCCTAAAAATAAGTCTTTGTA 57.789 33.333 0.00 0.00 0.00 2.41
1653 1677 9.211485 TCCGTTCCTAAAAATAAGTCTTTGTAG 57.789 33.333 0.00 0.00 0.00 2.74
1654 1678 9.211485 CCGTTCCTAAAAATAAGTCTTTGTAGA 57.789 33.333 0.00 0.00 30.50 2.59
1668 1692 8.367660 AGTCTTTGTAGAGATTTCACTATGGA 57.632 34.615 0.00 0.00 0.00 3.41
1669 1693 8.986991 AGTCTTTGTAGAGATTTCACTATGGAT 58.013 33.333 0.00 0.00 0.00 3.41
1681 1705 9.250624 GATTTCACTATGGATTATATACGGAGC 57.749 37.037 0.00 0.00 0.00 4.70
1682 1706 7.712204 TTCACTATGGATTATATACGGAGCA 57.288 36.000 0.00 0.00 0.00 4.26
1683 1707 7.712204 TCACTATGGATTATATACGGAGCAA 57.288 36.000 0.00 0.00 0.00 3.91
1684 1708 8.129496 TCACTATGGATTATATACGGAGCAAA 57.871 34.615 0.00 0.00 0.00 3.68
1685 1709 8.590204 TCACTATGGATTATATACGGAGCAAAA 58.410 33.333 0.00 0.00 0.00 2.44
1686 1710 9.383519 CACTATGGATTATATACGGAGCAAAAT 57.616 33.333 0.00 0.00 0.00 1.82
1687 1711 9.383519 ACTATGGATTATATACGGAGCAAAATG 57.616 33.333 0.00 0.00 0.00 2.32
1688 1712 9.599866 CTATGGATTATATACGGAGCAAAATGA 57.400 33.333 0.00 0.00 0.00 2.57
1689 1713 7.905604 TGGATTATATACGGAGCAAAATGAG 57.094 36.000 0.00 0.00 0.00 2.90
1690 1714 7.450074 TGGATTATATACGGAGCAAAATGAGT 58.550 34.615 0.00 0.00 0.00 3.41
1691 1715 7.387673 TGGATTATATACGGAGCAAAATGAGTG 59.612 37.037 0.00 0.00 0.00 3.51
1692 1716 7.602644 GGATTATATACGGAGCAAAATGAGTGA 59.397 37.037 0.00 0.00 0.00 3.41
1693 1717 8.902540 ATTATATACGGAGCAAAATGAGTGAA 57.097 30.769 0.00 0.00 0.00 3.18
1694 1718 8.902540 TTATATACGGAGCAAAATGAGTGAAT 57.097 30.769 0.00 0.00 0.00 2.57
1695 1719 5.741388 ATACGGAGCAAAATGAGTGAATC 57.259 39.130 0.00 0.00 0.00 2.52
1696 1720 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
1697 1721 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
1698 1722 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
1731 1755 8.877808 AATGCATCTATATACATCCGTATGTG 57.122 34.615 3.56 0.00 45.99 3.21
1733 1757 6.379988 TGCATCTATATACATCCGTATGTGGT 59.620 38.462 3.56 0.00 45.99 4.16
1735 1759 7.426410 CATCTATATACATCCGTATGTGGTCC 58.574 42.308 3.56 0.00 45.99 4.46
1737 1761 7.123383 TCTATATACATCCGTATGTGGTCCAT 58.877 38.462 3.56 0.00 45.99 3.41
1738 1762 8.276477 TCTATATACATCCGTATGTGGTCCATA 58.724 37.037 3.56 0.00 45.99 2.74
1749 1773 5.965033 ATGTGGTCCATACTGAAATCTCT 57.035 39.130 0.00 0.00 29.82 3.10
1751 1775 6.222038 TGTGGTCCATACTGAAATCTCTAC 57.778 41.667 0.00 0.00 0.00 2.59
1752 1776 5.719563 TGTGGTCCATACTGAAATCTCTACA 59.280 40.000 0.00 0.00 0.00 2.74
1753 1777 6.212589 TGTGGTCCATACTGAAATCTCTACAA 59.787 38.462 0.00 0.00 0.00 2.41
1754 1778 7.103641 GTGGTCCATACTGAAATCTCTACAAA 58.896 38.462 0.00 0.00 0.00 2.83
1755 1779 7.278868 GTGGTCCATACTGAAATCTCTACAAAG 59.721 40.741 0.00 0.00 0.00 2.77
1756 1780 7.180229 TGGTCCATACTGAAATCTCTACAAAGA 59.820 37.037 0.00 0.00 0.00 2.52
1757 1781 7.492994 GGTCCATACTGAAATCTCTACAAAGAC 59.507 40.741 0.00 0.00 0.00 3.01
1758 1782 8.254508 GTCCATACTGAAATCTCTACAAAGACT 58.745 37.037 0.00 0.00 0.00 3.24
1759 1783 8.816894 TCCATACTGAAATCTCTACAAAGACTT 58.183 33.333 0.00 0.00 0.00 3.01
1990 2022 6.458751 GCACAGATTGACCCTATGTTTGTATG 60.459 42.308 0.00 0.00 0.00 2.39
1995 2027 3.694072 TGACCCTATGTTTGTATGCAAGC 59.306 43.478 3.44 3.44 35.82 4.01
2027 2059 4.082733 TCACTTGTCCAGTTGTCTAGATCG 60.083 45.833 0.00 0.00 30.92 3.69
2061 2094 4.325741 TGACATTTTCGCACACACAAAAAG 59.674 37.500 0.00 0.00 0.00 2.27
2119 2152 0.811281 GCCCATGGCTCACTTTACAC 59.189 55.000 6.09 0.00 46.69 2.90
2120 2153 1.086696 CCCATGGCTCACTTTACACG 58.913 55.000 6.09 0.00 0.00 4.49
2121 2154 0.447801 CCATGGCTCACTTTACACGC 59.552 55.000 0.00 0.00 0.00 5.34
2122 2155 1.155889 CATGGCTCACTTTACACGCA 58.844 50.000 0.00 0.00 0.00 5.24
2123 2156 1.739466 CATGGCTCACTTTACACGCAT 59.261 47.619 0.00 0.00 0.00 4.73
2124 2157 2.753055 TGGCTCACTTTACACGCATA 57.247 45.000 0.00 0.00 0.00 3.14
2129 2162 4.025647 GGCTCACTTTACACGCATAGAATC 60.026 45.833 0.00 0.00 0.00 2.52
2150 2183 1.201987 GGTAAAATGCACGCTACACCG 60.202 52.381 0.00 0.00 0.00 4.94
2271 2304 7.440523 TCTTTTCAGACTTTTCTAAGCATCC 57.559 36.000 0.00 0.00 34.60 3.51
2505 2541 1.615384 GCCTTTCTCAGGGCTTCACAT 60.615 52.381 0.00 0.00 44.16 3.21
2522 2558 4.973168 TCACATTGCTCTTGTCTAAAGGT 58.027 39.130 0.00 0.00 0.00 3.50
2682 2718 2.614057 GCGGCATTGCTTGAACTACTAT 59.386 45.455 8.82 0.00 0.00 2.12
2685 2721 4.332543 CGGCATTGCTTGAACTACTATTCA 59.667 41.667 8.82 0.00 36.80 2.57
2800 2836 2.418746 GGCTCGCTCCTATGTTTTCAGA 60.419 50.000 0.00 0.00 0.00 3.27
2808 2844 5.163581 GCTCCTATGTTTTCAGACATTGCAT 60.164 40.000 0.00 0.00 40.54 3.96
2812 2848 3.820689 TGTTTTCAGACATTGCATACGC 58.179 40.909 0.00 0.00 39.24 4.42
3075 3111 1.490490 AGCTCTCAGTCGAGGAGATCT 59.510 52.381 15.03 13.59 40.40 2.75
3079 3115 0.034089 TCAGTCGAGGAGATCTGCCA 60.034 55.000 11.06 0.00 32.09 4.92
3128 3164 1.156736 GTAGTCTGCACCAACGCAAT 58.843 50.000 0.00 0.00 42.45 3.56
3129 3165 1.135972 GTAGTCTGCACCAACGCAATG 60.136 52.381 0.00 0.00 42.45 2.82
3164 3200 1.135575 GCAGTGCAATGTCCAAGTAGC 60.136 52.381 16.47 0.00 0.00 3.58
3169 3205 1.077716 AATGTCCAAGTAGCCCGCC 60.078 57.895 0.00 0.00 0.00 6.13
3234 3275 8.634444 AGTGATTCTTCGTTCTAGCATTAGTAT 58.366 33.333 0.00 0.00 0.00 2.12
3235 3276 9.250624 GTGATTCTTCGTTCTAGCATTAGTATT 57.749 33.333 0.00 0.00 0.00 1.89
3286 3335 5.470777 TCGAAATTGGTCTTAATCACCGTTT 59.529 36.000 0.00 6.62 36.61 3.60
3289 3338 5.622770 ATTGGTCTTAATCACCGTTTGAC 57.377 39.130 0.50 0.00 36.92 3.18
3305 3354 1.750399 GACGGCCCGAGTACTGGTA 60.750 63.158 11.71 0.00 0.00 3.25
3342 3633 6.658831 TGTTCTTTAGCTTGAATCTTTGACG 58.341 36.000 0.00 0.00 0.00 4.35
3360 3651 1.141053 ACGACCAGAAAGCAGTTTCCT 59.859 47.619 0.00 0.00 42.84 3.36
3490 3782 3.634448 ACTTCTCACCTATCTGTCCGATG 59.366 47.826 0.00 0.00 33.48 3.84
3580 3872 5.534278 TCATGCAGATATAGGGATCGATCTC 59.466 44.000 23.96 21.18 0.00 2.75
3581 3873 5.122707 TGCAGATATAGGGATCGATCTCT 57.877 43.478 29.76 29.76 41.41 3.10
3582 3874 5.129634 TGCAGATATAGGGATCGATCTCTC 58.870 45.833 30.71 16.73 38.82 3.20
3583 3875 4.213270 GCAGATATAGGGATCGATCTCTCG 59.787 50.000 30.71 14.09 46.41 4.04
3584 3876 5.364778 CAGATATAGGGATCGATCTCTCGT 58.635 45.833 30.71 21.75 45.25 4.18
3585 3877 5.465390 CAGATATAGGGATCGATCTCTCGTC 59.535 48.000 30.71 23.76 45.25 4.20
3586 3878 2.476126 TAGGGATCGATCTCTCGTCC 57.524 55.000 30.71 18.18 45.25 4.79
3588 3880 3.022940 GGATCGATCTCTCGTCCCA 57.977 57.895 23.96 0.00 45.25 4.37
3589 3881 1.540267 GGATCGATCTCTCGTCCCAT 58.460 55.000 23.96 0.00 45.25 4.00
3590 3882 1.470890 GGATCGATCTCTCGTCCCATC 59.529 57.143 23.96 0.00 45.25 3.51
3591 3883 2.155279 GATCGATCTCTCGTCCCATCA 58.845 52.381 18.29 0.00 45.25 3.07
3592 3884 2.278332 TCGATCTCTCGTCCCATCAT 57.722 50.000 0.00 0.00 45.25 2.45
3593 3885 2.155279 TCGATCTCTCGTCCCATCATC 58.845 52.381 0.00 0.00 45.25 2.92
3594 3886 1.882623 CGATCTCTCGTCCCATCATCA 59.117 52.381 0.00 0.00 40.07 3.07
3595 3887 2.095314 CGATCTCTCGTCCCATCATCAG 60.095 54.545 0.00 0.00 40.07 2.90
3596 3888 2.736670 TCTCTCGTCCCATCATCAGA 57.263 50.000 0.00 0.00 0.00 3.27
3597 3889 3.018423 TCTCTCGTCCCATCATCAGAA 57.982 47.619 0.00 0.00 0.00 3.02
3598 3890 3.365472 TCTCTCGTCCCATCATCAGAAA 58.635 45.455 0.00 0.00 0.00 2.52
3599 3891 3.769300 TCTCTCGTCCCATCATCAGAAAA 59.231 43.478 0.00 0.00 0.00 2.29
3600 3892 4.118410 CTCTCGTCCCATCATCAGAAAAG 58.882 47.826 0.00 0.00 0.00 2.27
3601 3893 2.611292 CTCGTCCCATCATCAGAAAAGC 59.389 50.000 0.00 0.00 0.00 3.51
3602 3894 2.027285 TCGTCCCATCATCAGAAAAGCA 60.027 45.455 0.00 0.00 0.00 3.91
3603 3895 2.749076 CGTCCCATCATCAGAAAAGCAA 59.251 45.455 0.00 0.00 0.00 3.91
3604 3896 3.191162 CGTCCCATCATCAGAAAAGCAAA 59.809 43.478 0.00 0.00 0.00 3.68
3605 3897 4.142315 CGTCCCATCATCAGAAAAGCAAAT 60.142 41.667 0.00 0.00 0.00 2.32
3606 3898 5.346522 GTCCCATCATCAGAAAAGCAAATC 58.653 41.667 0.00 0.00 0.00 2.17
3607 3899 5.018149 TCCCATCATCAGAAAAGCAAATCA 58.982 37.500 0.00 0.00 0.00 2.57
3608 3900 5.481122 TCCCATCATCAGAAAAGCAAATCAA 59.519 36.000 0.00 0.00 0.00 2.57
3609 3901 5.579511 CCCATCATCAGAAAAGCAAATCAAC 59.420 40.000 0.00 0.00 0.00 3.18
3610 3902 5.287752 CCATCATCAGAAAAGCAAATCAACG 59.712 40.000 0.00 0.00 0.00 4.10
3611 3903 4.797471 TCATCAGAAAAGCAAATCAACGG 58.203 39.130 0.00 0.00 0.00 4.44
3612 3904 3.641437 TCAGAAAAGCAAATCAACGGG 57.359 42.857 0.00 0.00 0.00 5.28
3613 3905 3.218453 TCAGAAAAGCAAATCAACGGGA 58.782 40.909 0.00 0.00 0.00 5.14
3674 3966 2.641305 AGCATCTCTCAGTGCCAATTC 58.359 47.619 0.00 0.00 42.20 2.17
3768 4063 1.134818 TGCCTGGTAGACATACAAGCG 60.135 52.381 0.00 0.00 32.26 4.68
3774 4069 2.159476 GGTAGACATACAAGCGACACGA 60.159 50.000 0.00 0.00 33.21 4.35
3784 4079 0.460284 AGCGACACGACATGGATTCC 60.460 55.000 0.00 0.00 0.00 3.01
3816 4111 5.452078 TTCATGGTTTGGAACTCATGAAC 57.548 39.130 20.82 0.00 44.54 3.18
3837 4142 7.192913 TGAACTTGCACAATTTTGTACTACTG 58.807 34.615 0.00 0.00 39.91 2.74
3935 4304 7.118101 GTCGTACAATTTTAGTATCACACCCAA 59.882 37.037 0.00 0.00 0.00 4.12
3936 4305 7.660617 TCGTACAATTTTAGTATCACACCCAAA 59.339 33.333 0.00 0.00 0.00 3.28
3937 4306 8.291032 CGTACAATTTTAGTATCACACCCAAAA 58.709 33.333 0.00 0.00 0.00 2.44
3938 4307 9.401873 GTACAATTTTAGTATCACACCCAAAAC 57.598 33.333 0.00 0.00 29.30 2.43
3939 4308 8.012957 ACAATTTTAGTATCACACCCAAAACA 57.987 30.769 0.00 0.00 29.30 2.83
3940 4309 8.141268 ACAATTTTAGTATCACACCCAAAACAG 58.859 33.333 0.00 0.00 29.30 3.16
4092 4461 1.741770 GATTGCCTTCGCCGTCACT 60.742 57.895 0.00 0.00 0.00 3.41
4102 4471 2.889617 CCGTCACTGGCATCGGTA 59.110 61.111 10.72 0.00 38.45 4.02
4103 4472 1.518572 CCGTCACTGGCATCGGTAC 60.519 63.158 10.72 0.00 38.45 3.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.260002 CAAGTTCTTTGTTGCAAAACCTATTAT 57.740 29.630 0.00 0.00 31.92 1.28
2 3 6.037062 GCAAGTTCTTTGTTGCAAAACCTATT 59.963 34.615 0.00 0.00 46.83 1.73
3 4 5.523552 GCAAGTTCTTTGTTGCAAAACCTAT 59.476 36.000 0.00 0.00 46.83 2.57
6 7 4.002267 GCAAGTTCTTTGTTGCAAAACC 57.998 40.909 0.00 0.00 46.83 3.27
14 15 9.736023 CTAATTTTCTACAGCAAGTTCTTTGTT 57.264 29.630 0.00 0.00 39.08 2.83
15 16 9.120538 TCTAATTTTCTACAGCAAGTTCTTTGT 57.879 29.630 0.00 0.00 39.08 2.83
16 17 9.950680 TTCTAATTTTCTACAGCAAGTTCTTTG 57.049 29.630 0.00 0.00 39.88 2.77
46 47 9.533253 CAACAAGATCTTTATTGTGAAACCTTT 57.467 29.630 4.86 0.00 39.50 3.11
47 48 7.653311 GCAACAAGATCTTTATTGTGAAACCTT 59.347 33.333 21.88 0.00 39.50 3.50
48 49 7.147976 GCAACAAGATCTTTATTGTGAAACCT 58.852 34.615 21.88 0.00 39.50 3.50
49 50 6.922957 TGCAACAAGATCTTTATTGTGAAACC 59.077 34.615 21.88 10.73 39.50 3.27
50 51 7.357532 CGTGCAACAAGATCTTTATTGTGAAAC 60.358 37.037 21.88 16.14 39.50 2.78
51 52 6.636447 CGTGCAACAAGATCTTTATTGTGAAA 59.364 34.615 21.88 9.63 39.50 2.69
52 53 6.017523 TCGTGCAACAAGATCTTTATTGTGAA 60.018 34.615 21.88 11.31 39.50 3.18
53 54 5.468409 TCGTGCAACAAGATCTTTATTGTGA 59.532 36.000 21.88 16.69 39.50 3.58
54 55 5.688823 TCGTGCAACAAGATCTTTATTGTG 58.311 37.500 21.88 15.36 39.50 3.33
55 56 5.940192 TCGTGCAACAAGATCTTTATTGT 57.060 34.783 21.88 10.45 41.28 2.71
56 57 7.801547 ATTTCGTGCAACAAGATCTTTATTG 57.198 32.000 18.84 18.84 35.74 1.90
57 58 9.559958 CTAATTTCGTGCAACAAGATCTTTATT 57.440 29.630 4.86 0.27 35.74 1.40
58 59 8.946085 TCTAATTTCGTGCAACAAGATCTTTAT 58.054 29.630 4.86 0.00 35.74 1.40
59 60 8.317891 TCTAATTTCGTGCAACAAGATCTTTA 57.682 30.769 4.86 0.00 35.74 1.85
60 61 7.173218 TCTCTAATTTCGTGCAACAAGATCTTT 59.827 33.333 4.86 0.00 35.74 2.52
61 62 6.650807 TCTCTAATTTCGTGCAACAAGATCTT 59.349 34.615 0.88 0.88 35.74 2.40
62 63 6.166279 TCTCTAATTTCGTGCAACAAGATCT 58.834 36.000 0.00 0.00 35.74 2.75
63 64 6.408858 TCTCTAATTTCGTGCAACAAGATC 57.591 37.500 0.00 0.00 35.74 2.75
64 65 6.128172 CCTTCTCTAATTTCGTGCAACAAGAT 60.128 38.462 0.00 0.00 35.74 2.40
65 66 5.179368 CCTTCTCTAATTTCGTGCAACAAGA 59.821 40.000 0.00 0.00 35.74 3.02
66 67 5.385617 CCTTCTCTAATTTCGTGCAACAAG 58.614 41.667 0.00 0.00 35.74 3.16
67 68 4.215399 CCCTTCTCTAATTTCGTGCAACAA 59.785 41.667 0.00 0.00 35.74 2.83
68 69 3.751175 CCCTTCTCTAATTTCGTGCAACA 59.249 43.478 0.00 0.00 35.74 3.33
69 70 3.127030 CCCCTTCTCTAATTTCGTGCAAC 59.873 47.826 0.00 0.00 0.00 4.17
70 71 3.008594 TCCCCTTCTCTAATTTCGTGCAA 59.991 43.478 0.00 0.00 0.00 4.08
71 72 2.569853 TCCCCTTCTCTAATTTCGTGCA 59.430 45.455 0.00 0.00 0.00 4.57
72 73 3.261981 TCCCCTTCTCTAATTTCGTGC 57.738 47.619 0.00 0.00 0.00 5.34
73 74 6.569179 TTTTTCCCCTTCTCTAATTTCGTG 57.431 37.500 0.00 0.00 0.00 4.35
93 94 8.424274 AGATTGAAAGTTTTCTCGCAATTTTT 57.576 26.923 6.21 0.00 38.02 1.94
94 95 9.696917 ATAGATTGAAAGTTTTCTCGCAATTTT 57.303 25.926 6.21 0.00 38.02 1.82
95 96 9.696917 AATAGATTGAAAGTTTTCTCGCAATTT 57.303 25.926 6.21 0.00 38.02 1.82
96 97 9.346725 GAATAGATTGAAAGTTTTCTCGCAATT 57.653 29.630 6.21 2.02 38.02 2.32
97 98 8.514594 TGAATAGATTGAAAGTTTTCTCGCAAT 58.485 29.630 6.21 0.00 38.02 3.56
98 99 7.870826 TGAATAGATTGAAAGTTTTCTCGCAA 58.129 30.769 6.21 0.00 38.02 4.85
99 100 7.433708 TGAATAGATTGAAAGTTTTCTCGCA 57.566 32.000 6.21 0.00 38.02 5.10
100 101 8.177663 TGATGAATAGATTGAAAGTTTTCTCGC 58.822 33.333 6.21 0.00 38.02 5.03
106 107 9.903682 CACAGTTGATGAATAGATTGAAAGTTT 57.096 29.630 0.00 0.00 0.00 2.66
107 108 9.288576 TCACAGTTGATGAATAGATTGAAAGTT 57.711 29.630 0.00 0.00 0.00 2.66
108 109 8.853077 TCACAGTTGATGAATAGATTGAAAGT 57.147 30.769 0.00 0.00 0.00 2.66
109 110 9.770503 CTTCACAGTTGATGAATAGATTGAAAG 57.229 33.333 0.00 0.00 35.57 2.62
110 111 8.733458 CCTTCACAGTTGATGAATAGATTGAAA 58.267 33.333 0.00 0.00 35.57 2.69
111 112 7.884877 ACCTTCACAGTTGATGAATAGATTGAA 59.115 33.333 0.00 0.00 35.57 2.69
112 113 7.397221 ACCTTCACAGTTGATGAATAGATTGA 58.603 34.615 0.00 0.00 35.57 2.57
113 114 7.621428 ACCTTCACAGTTGATGAATAGATTG 57.379 36.000 0.00 0.00 35.57 2.67
114 115 8.543774 ACTACCTTCACAGTTGATGAATAGATT 58.456 33.333 0.00 0.00 35.57 2.40
115 116 8.083828 ACTACCTTCACAGTTGATGAATAGAT 57.916 34.615 0.00 0.00 35.57 1.98
116 117 7.482169 ACTACCTTCACAGTTGATGAATAGA 57.518 36.000 0.00 0.00 35.57 1.98
117 118 8.251026 TGTACTACCTTCACAGTTGATGAATAG 58.749 37.037 0.00 0.00 35.57 1.73
118 119 8.129496 TGTACTACCTTCACAGTTGATGAATA 57.871 34.615 0.00 0.00 35.57 1.75
119 120 7.004555 TGTACTACCTTCACAGTTGATGAAT 57.995 36.000 0.00 0.00 35.57 2.57
120 121 6.413783 TGTACTACCTTCACAGTTGATGAA 57.586 37.500 0.00 0.00 34.89 2.57
121 122 6.413783 TTGTACTACCTTCACAGTTGATGA 57.586 37.500 0.00 0.00 0.00 2.92
122 123 6.929049 TCTTTGTACTACCTTCACAGTTGATG 59.071 38.462 0.00 0.00 0.00 3.07
123 124 7.062749 TCTTTGTACTACCTTCACAGTTGAT 57.937 36.000 0.00 0.00 0.00 2.57
124 125 6.474140 TCTTTGTACTACCTTCACAGTTGA 57.526 37.500 0.00 0.00 0.00 3.18
125 126 6.537301 TGTTCTTTGTACTACCTTCACAGTTG 59.463 38.462 0.00 0.00 0.00 3.16
126 127 6.537660 GTGTTCTTTGTACTACCTTCACAGTT 59.462 38.462 0.00 0.00 0.00 3.16
127 128 6.047231 GTGTTCTTTGTACTACCTTCACAGT 58.953 40.000 0.00 0.00 0.00 3.55
128 129 6.281405 AGTGTTCTTTGTACTACCTTCACAG 58.719 40.000 0.00 0.00 0.00 3.66
129 130 6.229936 AGTGTTCTTTGTACTACCTTCACA 57.770 37.500 0.00 0.00 0.00 3.58
130 131 7.655490 TCTAGTGTTCTTTGTACTACCTTCAC 58.345 38.462 0.00 0.00 0.00 3.18
131 132 7.828508 TCTAGTGTTCTTTGTACTACCTTCA 57.171 36.000 0.00 0.00 0.00 3.02
132 133 8.358895 ACTTCTAGTGTTCTTTGTACTACCTTC 58.641 37.037 0.00 0.00 0.00 3.46
133 134 8.247666 ACTTCTAGTGTTCTTTGTACTACCTT 57.752 34.615 0.00 0.00 0.00 3.50
134 135 7.836479 ACTTCTAGTGTTCTTTGTACTACCT 57.164 36.000 0.00 0.00 0.00 3.08
135 136 9.971922 TTTACTTCTAGTGTTCTTTGTACTACC 57.028 33.333 0.00 0.00 0.00 3.18
148 149 9.449719 CCTGGATGTAAATTTTACTTCTAGTGT 57.550 33.333 27.69 8.19 32.32 3.55
149 150 9.449719 ACCTGGATGTAAATTTTACTTCTAGTG 57.550 33.333 27.69 23.62 32.32 2.74
150 151 9.668497 GACCTGGATGTAAATTTTACTTCTAGT 57.332 33.333 27.69 21.88 32.32 2.57
151 152 9.110502 GGACCTGGATGTAAATTTTACTTCTAG 57.889 37.037 25.58 25.58 33.26 2.43
152 153 7.767198 CGGACCTGGATGTAAATTTTACTTCTA 59.233 37.037 23.54 19.68 0.00 2.10
153 154 6.598064 CGGACCTGGATGTAAATTTTACTTCT 59.402 38.462 23.54 11.80 0.00 2.85
154 155 6.373495 ACGGACCTGGATGTAAATTTTACTTC 59.627 38.462 19.47 19.47 0.00 3.01
155 156 6.243148 ACGGACCTGGATGTAAATTTTACTT 58.757 36.000 17.70 12.59 0.00 2.24
156 157 5.812286 ACGGACCTGGATGTAAATTTTACT 58.188 37.500 17.70 6.06 0.00 2.24
157 158 7.010830 GTCTACGGACCTGGATGTAAATTTTAC 59.989 40.741 11.57 11.57 36.53 2.01
158 159 7.043565 GTCTACGGACCTGGATGTAAATTTTA 58.956 38.462 0.00 0.00 36.53 1.52
159 160 5.878669 GTCTACGGACCTGGATGTAAATTTT 59.121 40.000 0.00 0.00 36.53 1.82
160 161 5.425630 GTCTACGGACCTGGATGTAAATTT 58.574 41.667 0.00 0.00 36.53 1.82
161 162 5.019785 GTCTACGGACCTGGATGTAAATT 57.980 43.478 0.00 0.00 36.53 1.82
162 163 4.667519 GTCTACGGACCTGGATGTAAAT 57.332 45.455 0.00 0.00 36.53 1.40
174 175 1.180029 TTGCTAGGTGGTCTACGGAC 58.820 55.000 0.00 0.00 41.43 4.79
175 176 1.754803 CATTGCTAGGTGGTCTACGGA 59.245 52.381 0.00 0.00 0.00 4.69
176 177 1.754803 TCATTGCTAGGTGGTCTACGG 59.245 52.381 0.00 0.00 0.00 4.02
177 178 2.427453 AGTCATTGCTAGGTGGTCTACG 59.573 50.000 0.00 0.00 0.00 3.51
178 179 4.401519 TGTAGTCATTGCTAGGTGGTCTAC 59.598 45.833 0.00 0.00 0.00 2.59
179 180 4.606210 TGTAGTCATTGCTAGGTGGTCTA 58.394 43.478 0.00 0.00 0.00 2.59
180 181 3.441101 TGTAGTCATTGCTAGGTGGTCT 58.559 45.455 0.00 0.00 0.00 3.85
181 182 3.887621 TGTAGTCATTGCTAGGTGGTC 57.112 47.619 0.00 0.00 0.00 4.02
182 183 3.682718 GCATGTAGTCATTGCTAGGTGGT 60.683 47.826 0.00 0.00 31.15 4.16
183 184 2.874701 GCATGTAGTCATTGCTAGGTGG 59.125 50.000 0.00 0.00 31.15 4.61
184 185 3.310774 GTGCATGTAGTCATTGCTAGGTG 59.689 47.826 0.00 0.00 33.04 4.00
185 186 3.198635 AGTGCATGTAGTCATTGCTAGGT 59.801 43.478 0.00 0.00 33.04 3.08
186 187 3.558829 CAGTGCATGTAGTCATTGCTAGG 59.441 47.826 0.00 0.00 33.04 3.02
187 188 3.558829 CCAGTGCATGTAGTCATTGCTAG 59.441 47.826 0.00 0.00 33.04 3.42
188 189 3.197549 TCCAGTGCATGTAGTCATTGCTA 59.802 43.478 0.00 0.00 33.04 3.49
189 190 2.026915 TCCAGTGCATGTAGTCATTGCT 60.027 45.455 0.00 0.00 33.04 3.91
190 191 2.353889 CTCCAGTGCATGTAGTCATTGC 59.646 50.000 0.00 0.00 31.15 3.56
191 192 2.353889 GCTCCAGTGCATGTAGTCATTG 59.646 50.000 0.00 0.00 31.15 2.82
192 193 2.636830 GCTCCAGTGCATGTAGTCATT 58.363 47.619 0.00 0.00 31.15 2.57
193 194 1.472201 CGCTCCAGTGCATGTAGTCAT 60.472 52.381 0.00 0.00 34.21 3.06
194 195 0.108662 CGCTCCAGTGCATGTAGTCA 60.109 55.000 0.00 0.00 0.00 3.41
195 196 0.173481 TCGCTCCAGTGCATGTAGTC 59.827 55.000 0.00 0.00 0.00 2.59
196 197 0.608130 TTCGCTCCAGTGCATGTAGT 59.392 50.000 0.00 0.00 0.00 2.73
197 198 1.002366 GTTCGCTCCAGTGCATGTAG 58.998 55.000 0.00 0.00 0.00 2.74
198 199 0.391130 GGTTCGCTCCAGTGCATGTA 60.391 55.000 0.00 0.00 0.00 2.29
199 200 1.672356 GGTTCGCTCCAGTGCATGT 60.672 57.895 0.00 0.00 0.00 3.21
200 201 2.743752 CGGTTCGCTCCAGTGCATG 61.744 63.158 0.00 0.00 0.00 4.06
201 202 2.434884 CGGTTCGCTCCAGTGCAT 60.435 61.111 0.00 0.00 0.00 3.96
202 203 3.158537 TTCGGTTCGCTCCAGTGCA 62.159 57.895 0.00 0.00 0.00 4.57
203 204 2.357034 TTCGGTTCGCTCCAGTGC 60.357 61.111 0.00 0.00 0.00 4.40
204 205 1.738099 CCTTCGGTTCGCTCCAGTG 60.738 63.158 0.00 0.00 0.00 3.66
205 206 2.657237 CCTTCGGTTCGCTCCAGT 59.343 61.111 0.00 0.00 0.00 4.00
206 207 2.815647 GCCTTCGGTTCGCTCCAG 60.816 66.667 0.00 0.00 0.00 3.86
207 208 4.735132 CGCCTTCGGTTCGCTCCA 62.735 66.667 0.00 0.00 0.00 3.86
223 224 3.545481 GACGATGACAGCGGTGCG 61.545 66.667 18.40 12.53 0.00 5.34
224 225 2.125912 AGACGATGACAGCGGTGC 60.126 61.111 18.40 8.30 0.00 5.01
225 226 0.524392 GAGAGACGATGACAGCGGTG 60.524 60.000 18.40 14.13 0.00 4.94
226 227 1.803943 GAGAGACGATGACAGCGGT 59.196 57.895 18.40 3.82 0.00 5.68
227 228 1.297967 CGAGAGACGATGACAGCGG 60.298 63.158 18.40 0.00 45.77 5.52
228 229 1.936880 GCGAGAGACGATGACAGCG 60.937 63.158 12.26 12.26 45.77 5.18
229 230 0.591236 GAGCGAGAGACGATGACAGC 60.591 60.000 0.00 0.00 41.91 4.40
230 231 0.729690 TGAGCGAGAGACGATGACAG 59.270 55.000 0.00 0.00 41.91 3.51
231 232 0.448197 GTGAGCGAGAGACGATGACA 59.552 55.000 0.00 0.00 43.17 3.58
232 233 0.248296 GGTGAGCGAGAGACGATGAC 60.248 60.000 0.00 0.00 42.97 3.06
233 234 1.706287 CGGTGAGCGAGAGACGATGA 61.706 60.000 0.00 0.00 41.91 2.92
234 235 1.297967 CGGTGAGCGAGAGACGATG 60.298 63.158 0.00 0.00 41.91 3.84
235 236 2.473760 CCGGTGAGCGAGAGACGAT 61.474 63.158 5.27 0.00 45.46 3.73
236 237 3.125573 CCGGTGAGCGAGAGACGA 61.126 66.667 5.27 0.00 45.77 4.20
237 238 3.102107 CTCCGGTGAGCGAGAGACG 62.102 68.421 5.27 0.00 45.66 4.18
238 239 1.984321 GACTCCGGTGAGCGAGAGAC 61.984 65.000 22.48 15.48 42.74 3.36
239 240 1.745864 GACTCCGGTGAGCGAGAGA 60.746 63.158 22.48 5.62 42.74 3.10
240 241 2.795297 GACTCCGGTGAGCGAGAG 59.205 66.667 11.17 16.80 42.74 3.20
241 242 3.125573 CGACTCCGGTGAGCGAGA 61.126 66.667 11.17 0.00 42.74 4.04
251 252 2.030562 AGTGTTTGCCCGACTCCG 59.969 61.111 0.00 0.00 0.00 4.63
252 253 0.818040 AACAGTGTTTGCCCGACTCC 60.818 55.000 1.64 0.00 0.00 3.85
253 254 0.307760 CAACAGTGTTTGCCCGACTC 59.692 55.000 5.57 0.00 0.00 3.36
254 255 0.393808 ACAACAGTGTTTGCCCGACT 60.394 50.000 5.57 0.00 32.58 4.18
255 256 1.263217 CTACAACAGTGTTTGCCCGAC 59.737 52.381 5.57 0.00 39.30 4.79
256 257 1.134340 ACTACAACAGTGTTTGCCCGA 60.134 47.619 5.57 0.00 39.30 5.14
257 258 1.305201 ACTACAACAGTGTTTGCCCG 58.695 50.000 5.57 0.00 39.30 6.13
258 259 3.497262 GTCTACTACAACAGTGTTTGCCC 59.503 47.826 5.57 0.00 39.30 5.36
259 260 4.124238 TGTCTACTACAACAGTGTTTGCC 58.876 43.478 5.57 0.00 39.30 4.52
260 261 5.330271 CTGTCTACTACAACAGTGTTTGC 57.670 43.478 5.57 0.00 39.30 3.68
267 268 4.761235 TTCCGACTGTCTACTACAACAG 57.239 45.455 6.21 1.17 46.61 3.16
268 269 4.581824 ACTTTCCGACTGTCTACTACAACA 59.418 41.667 6.21 0.00 37.74 3.33
269 270 5.118642 ACTTTCCGACTGTCTACTACAAC 57.881 43.478 6.21 0.00 37.74 3.32
270 271 4.823442 TGACTTTCCGACTGTCTACTACAA 59.177 41.667 6.21 0.00 37.74 2.41
271 272 4.392047 TGACTTTCCGACTGTCTACTACA 58.608 43.478 6.21 0.00 36.42 2.74
272 273 5.564048 ATGACTTTCCGACTGTCTACTAC 57.436 43.478 6.21 0.00 0.00 2.73
273 274 4.331992 CGATGACTTTCCGACTGTCTACTA 59.668 45.833 6.21 0.00 0.00 1.82
274 275 3.127203 CGATGACTTTCCGACTGTCTACT 59.873 47.826 6.21 0.00 0.00 2.57
275 276 3.119919 ACGATGACTTTCCGACTGTCTAC 60.120 47.826 6.21 0.00 0.00 2.59
276 277 3.079578 ACGATGACTTTCCGACTGTCTA 58.920 45.455 6.21 0.00 0.00 2.59
277 278 1.887198 ACGATGACTTTCCGACTGTCT 59.113 47.619 6.21 0.00 0.00 3.41
278 279 1.986378 CACGATGACTTTCCGACTGTC 59.014 52.381 0.00 0.00 0.00 3.51
279 280 1.935300 GCACGATGACTTTCCGACTGT 60.935 52.381 0.00 0.00 0.00 3.55
280 281 0.716108 GCACGATGACTTTCCGACTG 59.284 55.000 0.00 0.00 0.00 3.51
281 282 0.603569 AGCACGATGACTTTCCGACT 59.396 50.000 0.00 0.00 0.00 4.18
282 283 2.273370 TAGCACGATGACTTTCCGAC 57.727 50.000 0.00 0.00 0.00 4.79
283 284 2.416836 CCTTAGCACGATGACTTTCCGA 60.417 50.000 0.00 0.00 0.00 4.55
284 285 1.927174 CCTTAGCACGATGACTTTCCG 59.073 52.381 0.00 0.00 0.00 4.30
285 286 1.666189 GCCTTAGCACGATGACTTTCC 59.334 52.381 0.00 0.00 39.53 3.13
286 287 2.346803 TGCCTTAGCACGATGACTTTC 58.653 47.619 0.00 0.00 46.52 2.62
287 288 2.472695 TGCCTTAGCACGATGACTTT 57.527 45.000 0.00 0.00 46.52 2.66
298 299 2.289133 GCTAGTCCTATGGTGCCTTAGC 60.289 54.545 5.82 0.00 40.48 3.09
299 300 2.029828 CGCTAGTCCTATGGTGCCTTAG 60.030 54.545 4.65 4.65 0.00 2.18
300 301 1.961394 CGCTAGTCCTATGGTGCCTTA 59.039 52.381 0.00 0.00 0.00 2.69
301 302 0.753262 CGCTAGTCCTATGGTGCCTT 59.247 55.000 0.00 0.00 0.00 4.35
302 303 1.749334 GCGCTAGTCCTATGGTGCCT 61.749 60.000 0.00 0.00 0.00 4.75
303 304 1.301009 GCGCTAGTCCTATGGTGCC 60.301 63.158 0.00 0.00 0.00 5.01
304 305 0.034059 ATGCGCTAGTCCTATGGTGC 59.966 55.000 9.73 0.00 35.99 5.01
305 306 1.341209 TGATGCGCTAGTCCTATGGTG 59.659 52.381 9.73 0.00 0.00 4.17
306 307 1.615883 CTGATGCGCTAGTCCTATGGT 59.384 52.381 9.73 0.00 0.00 3.55
307 308 1.889170 TCTGATGCGCTAGTCCTATGG 59.111 52.381 9.73 0.00 0.00 2.74
308 309 3.243535 TGTTCTGATGCGCTAGTCCTATG 60.244 47.826 9.73 0.00 0.00 2.23
309 310 2.959030 TGTTCTGATGCGCTAGTCCTAT 59.041 45.455 9.73 0.00 0.00 2.57
310 311 2.359214 CTGTTCTGATGCGCTAGTCCTA 59.641 50.000 9.73 0.00 0.00 2.94
311 312 1.135915 CTGTTCTGATGCGCTAGTCCT 59.864 52.381 9.73 0.00 0.00 3.85
312 313 1.134965 ACTGTTCTGATGCGCTAGTCC 60.135 52.381 9.73 1.02 0.00 3.85
313 314 2.285827 ACTGTTCTGATGCGCTAGTC 57.714 50.000 9.73 4.94 0.00 2.59
314 315 3.512680 GTTACTGTTCTGATGCGCTAGT 58.487 45.455 9.73 2.99 0.00 2.57
315 316 2.860735 GGTTACTGTTCTGATGCGCTAG 59.139 50.000 9.73 4.65 0.00 3.42
316 317 2.734175 CGGTTACTGTTCTGATGCGCTA 60.734 50.000 9.73 0.00 0.00 4.26
317 318 1.726853 GGTTACTGTTCTGATGCGCT 58.273 50.000 9.73 0.00 0.00 5.92
318 319 0.370273 CGGTTACTGTTCTGATGCGC 59.630 55.000 0.00 0.00 0.00 6.09
319 320 1.654105 GACGGTTACTGTTCTGATGCG 59.346 52.381 0.00 0.00 0.00 4.73
320 321 1.654105 CGACGGTTACTGTTCTGATGC 59.346 52.381 0.00 0.00 0.00 3.91
321 322 1.654105 GCGACGGTTACTGTTCTGATG 59.346 52.381 0.00 0.00 0.00 3.07
322 323 1.403780 GGCGACGGTTACTGTTCTGAT 60.404 52.381 0.00 0.00 0.00 2.90
323 324 0.038892 GGCGACGGTTACTGTTCTGA 60.039 55.000 0.00 0.00 0.00 3.27
324 325 2.442084 GGCGACGGTTACTGTTCTG 58.558 57.895 0.00 0.00 0.00 3.02
325 326 4.981415 GGCGACGGTTACTGTTCT 57.019 55.556 0.00 0.00 0.00 3.01
337 338 0.640768 CGTTTCTCTTCATCGGCGAC 59.359 55.000 13.76 0.00 0.00 5.19
338 339 0.242825 ACGTTTCTCTTCATCGGCGA 59.757 50.000 13.87 13.87 0.00 5.54
339 340 1.846782 CTACGTTTCTCTTCATCGGCG 59.153 52.381 0.00 0.00 0.00 6.46
340 341 3.146618 TCTACGTTTCTCTTCATCGGC 57.853 47.619 0.00 0.00 0.00 5.54
341 342 3.969352 CGATCTACGTTTCTCTTCATCGG 59.031 47.826 0.00 0.00 37.22 4.18
342 343 3.969352 CCGATCTACGTTTCTCTTCATCG 59.031 47.826 0.00 0.00 40.78 3.84
343 344 5.171147 TCCGATCTACGTTTCTCTTCATC 57.829 43.478 0.00 0.00 40.78 2.92
344 345 5.125739 ACTTCCGATCTACGTTTCTCTTCAT 59.874 40.000 0.00 0.00 40.78 2.57
345 346 4.458295 ACTTCCGATCTACGTTTCTCTTCA 59.542 41.667 0.00 0.00 40.78 3.02
346 347 4.984205 ACTTCCGATCTACGTTTCTCTTC 58.016 43.478 0.00 0.00 40.78 2.87
347 348 4.458295 TGACTTCCGATCTACGTTTCTCTT 59.542 41.667 0.00 0.00 40.78 2.85
348 349 4.008330 TGACTTCCGATCTACGTTTCTCT 58.992 43.478 0.00 0.00 40.78 3.10
349 350 4.352600 TGACTTCCGATCTACGTTTCTC 57.647 45.455 0.00 0.00 40.78 2.87
350 351 4.778534 TTGACTTCCGATCTACGTTTCT 57.221 40.909 0.00 0.00 40.78 2.52
351 352 5.834239 TTTTGACTTCCGATCTACGTTTC 57.166 39.130 0.00 0.00 40.78 2.78
371 372 6.996282 TCGTCAGTCCCTCTTCTTTAATTTTT 59.004 34.615 0.00 0.00 0.00 1.94
372 373 6.427242 GTCGTCAGTCCCTCTTCTTTAATTTT 59.573 38.462 0.00 0.00 0.00 1.82
373 374 5.932883 GTCGTCAGTCCCTCTTCTTTAATTT 59.067 40.000 0.00 0.00 0.00 1.82
374 375 5.246429 AGTCGTCAGTCCCTCTTCTTTAATT 59.754 40.000 0.00 0.00 0.00 1.40
375 376 4.773149 AGTCGTCAGTCCCTCTTCTTTAAT 59.227 41.667 0.00 0.00 0.00 1.40
376 377 4.150359 AGTCGTCAGTCCCTCTTCTTTAA 58.850 43.478 0.00 0.00 0.00 1.52
377 378 3.764218 AGTCGTCAGTCCCTCTTCTTTA 58.236 45.455 0.00 0.00 0.00 1.85
378 379 2.599677 AGTCGTCAGTCCCTCTTCTTT 58.400 47.619 0.00 0.00 0.00 2.52
379 380 2.296073 AGTCGTCAGTCCCTCTTCTT 57.704 50.000 0.00 0.00 0.00 2.52
380 381 1.889829 CAAGTCGTCAGTCCCTCTTCT 59.110 52.381 0.00 0.00 0.00 2.85
381 382 1.614413 ACAAGTCGTCAGTCCCTCTTC 59.386 52.381 0.00 0.00 0.00 2.87
382 383 1.341531 CACAAGTCGTCAGTCCCTCTT 59.658 52.381 0.00 0.00 0.00 2.85
383 384 0.962489 CACAAGTCGTCAGTCCCTCT 59.038 55.000 0.00 0.00 0.00 3.69
384 385 0.674534 ACACAAGTCGTCAGTCCCTC 59.325 55.000 0.00 0.00 0.00 4.30
385 386 0.674534 GACACAAGTCGTCAGTCCCT 59.325 55.000 0.00 0.00 34.60 4.20
386 387 3.196613 GACACAAGTCGTCAGTCCC 57.803 57.895 0.00 0.00 34.60 4.46
395 396 3.059597 CGTCCAATTGAGTGACACAAGTC 60.060 47.826 7.12 0.00 45.19 3.01
396 397 2.872245 CGTCCAATTGAGTGACACAAGT 59.128 45.455 7.12 0.00 0.00 3.16
397 398 2.224079 CCGTCCAATTGAGTGACACAAG 59.776 50.000 7.12 0.00 0.00 3.16
398 399 2.217750 CCGTCCAATTGAGTGACACAA 58.782 47.619 7.12 0.00 0.00 3.33
399 400 1.877637 CCGTCCAATTGAGTGACACA 58.122 50.000 7.12 0.00 0.00 3.72
400 401 0.517316 GCCGTCCAATTGAGTGACAC 59.483 55.000 7.12 0.00 0.00 3.67
401 402 0.396435 AGCCGTCCAATTGAGTGACA 59.604 50.000 7.12 0.00 0.00 3.58
402 403 1.079503 GAGCCGTCCAATTGAGTGAC 58.920 55.000 7.12 5.16 0.00 3.67
403 404 0.389817 CGAGCCGTCCAATTGAGTGA 60.390 55.000 7.12 0.00 0.00 3.41
404 405 1.970917 GCGAGCCGTCCAATTGAGTG 61.971 60.000 7.12 0.00 0.00 3.51
405 406 1.741770 GCGAGCCGTCCAATTGAGT 60.742 57.895 7.12 0.00 0.00 3.41
406 407 0.179111 TAGCGAGCCGTCCAATTGAG 60.179 55.000 7.12 0.00 0.00 3.02
407 408 0.179111 CTAGCGAGCCGTCCAATTGA 60.179 55.000 7.12 0.00 0.00 2.57
408 409 1.154205 CCTAGCGAGCCGTCCAATTG 61.154 60.000 0.00 0.00 0.00 2.32
409 410 1.144057 CCTAGCGAGCCGTCCAATT 59.856 57.895 0.00 0.00 0.00 2.32
410 411 2.815308 CCTAGCGAGCCGTCCAAT 59.185 61.111 0.00 0.00 0.00 3.16
411 412 4.143333 GCCTAGCGAGCCGTCCAA 62.143 66.667 0.00 0.00 0.00 3.53
422 423 0.533085 GGAAAGATCCACCGCCTAGC 60.533 60.000 0.00 0.00 45.79 3.42
423 424 3.688553 GGAAAGATCCACCGCCTAG 57.311 57.895 0.00 0.00 45.79 3.02
454 455 0.388649 GAGATATGGGGCGTGCTACG 60.389 60.000 4.61 4.61 45.88 3.51
455 456 0.969894 AGAGATATGGGGCGTGCTAC 59.030 55.000 0.00 0.00 0.00 3.58
456 457 2.168496 GTAGAGATATGGGGCGTGCTA 58.832 52.381 0.00 0.00 0.00 3.49
457 458 0.969894 GTAGAGATATGGGGCGTGCT 59.030 55.000 0.00 0.00 0.00 4.40
458 459 0.969894 AGTAGAGATATGGGGCGTGC 59.030 55.000 0.00 0.00 0.00 5.34
459 460 2.894126 AGAAGTAGAGATATGGGGCGTG 59.106 50.000 0.00 0.00 0.00 5.34
460 461 3.158676 GAGAAGTAGAGATATGGGGCGT 58.841 50.000 0.00 0.00 0.00 5.68
461 462 3.426615 AGAGAAGTAGAGATATGGGGCG 58.573 50.000 0.00 0.00 0.00 6.13
462 463 7.837187 AGTATAAGAGAAGTAGAGATATGGGGC 59.163 40.741 0.00 0.00 0.00 5.80
504 505 5.070446 GGGAAGAAAGGTGAAATGAAAACCT 59.930 40.000 0.00 0.00 46.40 3.50
505 506 5.163353 TGGGAAGAAAGGTGAAATGAAAACC 60.163 40.000 0.00 0.00 0.00 3.27
506 507 5.753438 GTGGGAAGAAAGGTGAAATGAAAAC 59.247 40.000 0.00 0.00 0.00 2.43
507 508 5.163353 GGTGGGAAGAAAGGTGAAATGAAAA 60.163 40.000 0.00 0.00 0.00 2.29
508 509 4.343814 GGTGGGAAGAAAGGTGAAATGAAA 59.656 41.667 0.00 0.00 0.00 2.69
509 510 3.895041 GGTGGGAAGAAAGGTGAAATGAA 59.105 43.478 0.00 0.00 0.00 2.57
510 511 3.117322 TGGTGGGAAGAAAGGTGAAATGA 60.117 43.478 0.00 0.00 0.00 2.57
511 512 3.005791 GTGGTGGGAAGAAAGGTGAAATG 59.994 47.826 0.00 0.00 0.00 2.32
512 513 3.230976 GTGGTGGGAAGAAAGGTGAAAT 58.769 45.455 0.00 0.00 0.00 2.17
513 514 2.661718 GTGGTGGGAAGAAAGGTGAAA 58.338 47.619 0.00 0.00 0.00 2.69
514 515 1.133606 GGTGGTGGGAAGAAAGGTGAA 60.134 52.381 0.00 0.00 0.00 3.18
515 516 0.476771 GGTGGTGGGAAGAAAGGTGA 59.523 55.000 0.00 0.00 0.00 4.02
516 517 0.539669 GGGTGGTGGGAAGAAAGGTG 60.540 60.000 0.00 0.00 0.00 4.00
517 518 0.701310 AGGGTGGTGGGAAGAAAGGT 60.701 55.000 0.00 0.00 0.00 3.50
518 519 0.482887 AAGGGTGGTGGGAAGAAAGG 59.517 55.000 0.00 0.00 0.00 3.11
519 520 1.882352 CGAAGGGTGGTGGGAAGAAAG 60.882 57.143 0.00 0.00 0.00 2.62
520 521 0.109723 CGAAGGGTGGTGGGAAGAAA 59.890 55.000 0.00 0.00 0.00 2.52
521 522 1.057851 ACGAAGGGTGGTGGGAAGAA 61.058 55.000 0.00 0.00 0.00 2.52
522 523 1.460689 ACGAAGGGTGGTGGGAAGA 60.461 57.895 0.00 0.00 0.00 2.87
523 524 1.003718 GACGAAGGGTGGTGGGAAG 60.004 63.158 0.00 0.00 0.00 3.46
524 525 2.522367 GGACGAAGGGTGGTGGGAA 61.522 63.158 0.00 0.00 0.00 3.97
525 526 2.926242 GGACGAAGGGTGGTGGGA 60.926 66.667 0.00 0.00 0.00 4.37
526 527 2.824880 TTGGACGAAGGGTGGTGGG 61.825 63.158 0.00 0.00 0.00 4.61
527 528 1.599797 GTTGGACGAAGGGTGGTGG 60.600 63.158 0.00 0.00 0.00 4.61
528 529 1.599797 GGTTGGACGAAGGGTGGTG 60.600 63.158 0.00 0.00 0.00 4.17
529 530 1.350310 AAGGTTGGACGAAGGGTGGT 61.350 55.000 0.00 0.00 0.00 4.16
530 531 0.179001 AAAGGTTGGACGAAGGGTGG 60.179 55.000 0.00 0.00 0.00 4.61
531 532 1.235724 GAAAGGTTGGACGAAGGGTG 58.764 55.000 0.00 0.00 0.00 4.61
532 533 0.841289 TGAAAGGTTGGACGAAGGGT 59.159 50.000 0.00 0.00 0.00 4.34
533 534 1.812571 CATGAAAGGTTGGACGAAGGG 59.187 52.381 0.00 0.00 0.00 3.95
534 535 2.226437 CACATGAAAGGTTGGACGAAGG 59.774 50.000 0.00 0.00 0.00 3.46
535 536 3.138304 TCACATGAAAGGTTGGACGAAG 58.862 45.455 0.00 0.00 0.00 3.79
536 537 3.201353 TCACATGAAAGGTTGGACGAA 57.799 42.857 0.00 0.00 0.00 3.85
537 538 2.920724 TCACATGAAAGGTTGGACGA 57.079 45.000 0.00 0.00 0.00 4.20
538 539 5.353956 TGATTATCACATGAAAGGTTGGACG 59.646 40.000 0.00 0.00 0.00 4.79
539 540 6.757897 TGATTATCACATGAAAGGTTGGAC 57.242 37.500 0.00 0.00 0.00 4.02
540 541 7.614974 TGATTGATTATCACATGAAAGGTTGGA 59.385 33.333 0.00 0.00 38.35 3.53
541 542 7.774134 TGATTGATTATCACATGAAAGGTTGG 58.226 34.615 0.00 0.00 38.35 3.77
573 574 9.965824 GTGGAATTGATTCAGAAAGTAAGAAAA 57.034 29.630 6.11 0.00 38.53 2.29
574 575 9.354673 AGTGGAATTGATTCAGAAAGTAAGAAA 57.645 29.630 6.11 0.00 38.53 2.52
575 576 8.924511 AGTGGAATTGATTCAGAAAGTAAGAA 57.075 30.769 6.11 0.00 38.53 2.52
576 577 8.924511 AAGTGGAATTGATTCAGAAAGTAAGA 57.075 30.769 6.11 0.00 38.53 2.10
689 690 9.579768 GTGCCATTGTGTAAATAAATGTTCATA 57.420 29.630 0.00 0.00 30.84 2.15
690 691 8.313292 AGTGCCATTGTGTAAATAAATGTTCAT 58.687 29.630 0.00 0.00 30.84 2.57
691 692 7.665690 AGTGCCATTGTGTAAATAAATGTTCA 58.334 30.769 0.00 0.00 30.84 3.18
692 693 9.801873 ATAGTGCCATTGTGTAAATAAATGTTC 57.198 29.630 0.00 0.00 30.84 3.18
700 701 8.965819 TGTCAATAATAGTGCCATTGTGTAAAT 58.034 29.630 0.00 0.00 32.64 1.40
701 702 8.341892 TGTCAATAATAGTGCCATTGTGTAAA 57.658 30.769 0.00 0.00 32.64 2.01
702 703 7.066887 CCTGTCAATAATAGTGCCATTGTGTAA 59.933 37.037 0.00 0.00 32.64 2.41
703 704 6.542005 CCTGTCAATAATAGTGCCATTGTGTA 59.458 38.462 0.00 0.00 32.64 2.90
704 705 5.357878 CCTGTCAATAATAGTGCCATTGTGT 59.642 40.000 0.00 0.00 32.64 3.72
705 706 5.357878 ACCTGTCAATAATAGTGCCATTGTG 59.642 40.000 0.00 0.00 32.64 3.33
706 707 5.509498 ACCTGTCAATAATAGTGCCATTGT 58.491 37.500 0.00 0.00 32.64 2.71
707 708 7.566760 TTACCTGTCAATAATAGTGCCATTG 57.433 36.000 0.00 0.00 0.00 2.82
708 709 8.766994 ATTTACCTGTCAATAATAGTGCCATT 57.233 30.769 0.00 0.00 0.00 3.16
709 710 7.998383 TGATTTACCTGTCAATAATAGTGCCAT 59.002 33.333 0.00 0.00 0.00 4.40
710 711 7.282224 GTGATTTACCTGTCAATAATAGTGCCA 59.718 37.037 0.00 0.00 0.00 4.92
711 712 7.282224 TGTGATTTACCTGTCAATAATAGTGCC 59.718 37.037 0.00 0.00 0.00 5.01
712 713 8.208718 TGTGATTTACCTGTCAATAATAGTGC 57.791 34.615 0.00 0.00 0.00 4.40
714 715 8.893727 GCTTGTGATTTACCTGTCAATAATAGT 58.106 33.333 0.00 0.00 0.00 2.12
715 716 9.113838 AGCTTGTGATTTACCTGTCAATAATAG 57.886 33.333 0.00 0.00 0.00 1.73
716 717 9.109393 GAGCTTGTGATTTACCTGTCAATAATA 57.891 33.333 0.00 0.00 0.00 0.98
717 718 7.831193 AGAGCTTGTGATTTACCTGTCAATAAT 59.169 33.333 0.00 0.00 0.00 1.28
718 719 7.168219 AGAGCTTGTGATTTACCTGTCAATAA 58.832 34.615 0.00 0.00 0.00 1.40
719 720 6.711277 AGAGCTTGTGATTTACCTGTCAATA 58.289 36.000 0.00 0.00 0.00 1.90
720 721 5.564550 AGAGCTTGTGATTTACCTGTCAAT 58.435 37.500 0.00 0.00 0.00 2.57
721 722 4.973168 AGAGCTTGTGATTTACCTGTCAA 58.027 39.130 0.00 0.00 0.00 3.18
722 723 4.563580 GGAGAGCTTGTGATTTACCTGTCA 60.564 45.833 0.00 0.00 0.00 3.58
723 724 3.935828 GGAGAGCTTGTGATTTACCTGTC 59.064 47.826 0.00 0.00 0.00 3.51
724 725 3.307762 GGGAGAGCTTGTGATTTACCTGT 60.308 47.826 0.00 0.00 0.00 4.00
725 726 3.274288 GGGAGAGCTTGTGATTTACCTG 58.726 50.000 0.00 0.00 0.00 4.00
726 727 2.093447 CGGGAGAGCTTGTGATTTACCT 60.093 50.000 0.00 0.00 0.00 3.08
727 728 2.280628 CGGGAGAGCTTGTGATTTACC 58.719 52.381 0.00 0.00 0.00 2.85
728 729 2.973945 ACGGGAGAGCTTGTGATTTAC 58.026 47.619 0.00 0.00 0.00 2.01
729 730 3.695830 AACGGGAGAGCTTGTGATTTA 57.304 42.857 0.00 0.00 0.00 1.40
730 731 2.568623 AACGGGAGAGCTTGTGATTT 57.431 45.000 0.00 0.00 0.00 2.17
731 732 3.914426 ATAACGGGAGAGCTTGTGATT 57.086 42.857 0.00 0.00 0.00 2.57
732 733 4.694339 GTTATAACGGGAGAGCTTGTGAT 58.306 43.478 0.00 0.00 0.00 3.06
733 734 4.119442 GTTATAACGGGAGAGCTTGTGA 57.881 45.455 0.00 0.00 0.00 3.58
753 754 3.438297 ACTAGAATAATGCTCGTGCGT 57.562 42.857 4.84 0.99 43.34 5.24
754 755 4.778842 AAACTAGAATAATGCTCGTGCG 57.221 40.909 4.84 0.00 43.34 5.34
788 789 5.577835 GCGCAATTACATTCTAACCATCAA 58.422 37.500 0.30 0.00 0.00 2.57
798 799 3.425404 ACATTGACGCGCAATTACATTC 58.575 40.909 20.85 3.69 44.68 2.67
800 801 2.223249 GGACATTGACGCGCAATTACAT 60.223 45.455 20.85 10.59 44.68 2.29
801 802 1.129624 GGACATTGACGCGCAATTACA 59.870 47.619 20.85 4.73 44.68 2.41
823 831 3.612860 TCTTTCGCTAGAAAACATCGCTC 59.387 43.478 0.00 0.00 44.77 5.03
891 899 9.664332 CCTTTTCTCTCTTCAGATTCAGAAATA 57.336 33.333 0.00 0.00 0.00 1.40
892 900 7.121020 GCCTTTTCTCTCTTCAGATTCAGAAAT 59.879 37.037 0.00 0.00 0.00 2.17
895 903 5.486526 GCCTTTTCTCTCTTCAGATTCAGA 58.513 41.667 0.00 0.00 0.00 3.27
941 964 2.282462 CCTGTGGCGAGGGCTTTT 60.282 61.111 0.00 0.00 39.81 2.27
956 979 1.303888 TCGGAAGACGTACAGGCCT 60.304 57.895 0.00 0.00 44.69 5.19
1122 1145 3.204827 GCATTGGCGGCGATCAGT 61.205 61.111 12.98 1.43 0.00 3.41
1137 1160 2.048597 CGGAAGTACACCAGCGCA 60.049 61.111 11.47 0.00 0.00 6.09
1286 1310 4.974591 GCCTAATCTATAATGCAAAGGCG 58.025 43.478 0.00 0.00 45.35 5.52
1349 1373 8.964420 TTTAGCTATGTAAATGTGCTGTTTTC 57.036 30.769 0.00 0.00 35.47 2.29
1394 1418 6.665992 TCAGGTCTGACTTAACATACTTGT 57.334 37.500 7.85 0.00 34.11 3.16
1537 1561 1.005394 AACTCCGCAACCCTGTACG 60.005 57.895 0.00 0.00 0.00 3.67
1607 1631 3.006644 GGAGGGAGTATTAGCTAAACCCG 59.993 52.174 23.13 0.00 40.55 5.28
1642 1666 8.816894 TCCATAGTGAAATCTCTACAAAGACTT 58.183 33.333 0.00 0.00 0.00 3.01
1643 1667 8.367660 TCCATAGTGAAATCTCTACAAAGACT 57.632 34.615 0.00 0.00 0.00 3.24
1656 1680 8.758829 TGCTCCGTATATAATCCATAGTGAAAT 58.241 33.333 0.00 0.00 0.00 2.17
1657 1681 8.129496 TGCTCCGTATATAATCCATAGTGAAA 57.871 34.615 0.00 0.00 0.00 2.69
1659 1683 7.712204 TTGCTCCGTATATAATCCATAGTGA 57.288 36.000 0.00 0.00 0.00 3.41
1660 1684 8.771920 TTTTGCTCCGTATATAATCCATAGTG 57.228 34.615 0.00 0.00 0.00 2.74
1662 1686 9.599866 TCATTTTGCTCCGTATATAATCCATAG 57.400 33.333 0.00 0.00 0.00 2.23
1663 1687 9.599866 CTCATTTTGCTCCGTATATAATCCATA 57.400 33.333 0.00 0.00 0.00 2.74
1664 1688 8.103305 ACTCATTTTGCTCCGTATATAATCCAT 58.897 33.333 0.00 0.00 0.00 3.41
1665 1689 7.387673 CACTCATTTTGCTCCGTATATAATCCA 59.612 37.037 0.00 0.00 0.00 3.41
1667 1691 8.534333 TCACTCATTTTGCTCCGTATATAATC 57.466 34.615 0.00 0.00 0.00 1.75
1668 1692 8.902540 TTCACTCATTTTGCTCCGTATATAAT 57.097 30.769 0.00 0.00 0.00 1.28
1669 1693 8.902540 ATTCACTCATTTTGCTCCGTATATAA 57.097 30.769 0.00 0.00 0.00 0.98
1671 1695 7.220030 AGATTCACTCATTTTGCTCCGTATAT 58.780 34.615 0.00 0.00 0.00 0.86
1676 1700 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
1677 1701 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
1678 1702 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
1689 1713 8.430801 AGATGCATTTTAGAGTGTAGATTCAC 57.569 34.615 0.00 0.00 38.46 3.18
1710 1734 7.068226 TGGACCACATACGGATGTATATAGATG 59.932 40.741 14.23 0.00 44.82 2.90
1711 1735 7.123383 TGGACCACATACGGATGTATATAGAT 58.877 38.462 14.23 0.00 44.82 1.98
1712 1736 6.486941 TGGACCACATACGGATGTATATAGA 58.513 40.000 14.23 0.00 44.82 1.98
1729 1753 6.222038 TGTAGAGATTTCAGTATGGACCAC 57.778 41.667 0.00 0.00 36.16 4.16
1731 1755 7.492994 GTCTTTGTAGAGATTTCAGTATGGACC 59.507 40.741 0.00 0.00 36.16 4.46
1733 1757 8.367660 AGTCTTTGTAGAGATTTCAGTATGGA 57.632 34.615 0.00 0.00 36.16 3.41
1750 1774 7.985752 CCTCCGTTCCTAAATATAAGTCTTTGT 59.014 37.037 0.00 0.00 0.00 2.83
1751 1775 7.441458 CCCTCCGTTCCTAAATATAAGTCTTTG 59.559 40.741 0.00 0.00 0.00 2.77
1752 1776 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
1753 1777 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
1754 1778 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
1755 1779 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
1756 1780 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
1757 1781 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
1758 1782 8.551682 TTTACTCCCTCCGTTCCTAAATATAA 57.448 34.615 0.00 0.00 0.00 0.98
1759 1783 8.424133 GTTTTACTCCCTCCGTTCCTAAATATA 58.576 37.037 0.00 0.00 0.00 0.86
1760 1784 7.126879 AGTTTTACTCCCTCCGTTCCTAAATAT 59.873 37.037 0.00 0.00 0.00 1.28
1761 1785 6.441604 AGTTTTACTCCCTCCGTTCCTAAATA 59.558 38.462 0.00 0.00 0.00 1.40
1766 1790 2.617658 AGTTTTACTCCCTCCGTTCCT 58.382 47.619 0.00 0.00 0.00 3.36
1769 1793 4.019591 AGCATAAGTTTTACTCCCTCCGTT 60.020 41.667 0.00 0.00 0.00 4.44
1990 2022 2.079925 CAAGTGAGTCCCTAAGCTTGC 58.920 52.381 9.86 0.00 0.00 4.01
2027 2059 5.739161 GTGCGAAAATGTCATTTAGATCCAC 59.261 40.000 11.18 10.91 0.00 4.02
2034 2066 5.175090 TGTGTGTGCGAAAATGTCATTTA 57.825 34.783 11.18 0.00 0.00 1.40
2061 2094 3.120060 GCGCATCATGTCATTTAGATCCC 60.120 47.826 0.30 0.00 0.00 3.85
2119 2152 4.211389 GTGCATTTTACCGATTCTATGCG 58.789 43.478 0.00 0.00 40.81 4.73
2120 2153 4.211389 CGTGCATTTTACCGATTCTATGC 58.789 43.478 0.00 0.00 38.97 3.14
2121 2154 4.024893 AGCGTGCATTTTACCGATTCTATG 60.025 41.667 0.00 0.00 0.00 2.23
2122 2155 4.127171 AGCGTGCATTTTACCGATTCTAT 58.873 39.130 0.00 0.00 0.00 1.98
2123 2156 3.527533 AGCGTGCATTTTACCGATTCTA 58.472 40.909 0.00 0.00 0.00 2.10
2124 2157 2.356135 AGCGTGCATTTTACCGATTCT 58.644 42.857 0.00 0.00 0.00 2.40
2129 2162 1.201987 GGTGTAGCGTGCATTTTACCG 60.202 52.381 0.00 0.00 0.00 4.02
2271 2304 9.057089 GTGGTGGATATATAAAACTCTGGAAAG 57.943 37.037 0.00 0.00 0.00 2.62
2505 2541 4.207165 AGCAAACCTTTAGACAAGAGCAA 58.793 39.130 0.00 0.00 0.00 3.91
2546 2582 5.010617 TCCAGCAGAATACTGATAATACGCA 59.989 40.000 0.00 0.00 46.03 5.24
2682 2718 2.689471 CCGGATTGAAAGCATGGATGAA 59.311 45.455 0.00 0.00 0.00 2.57
2685 2721 2.579873 CTCCGGATTGAAAGCATGGAT 58.420 47.619 3.57 0.00 0.00 3.41
2800 2836 2.002586 GACTCACAGCGTATGCAATGT 58.997 47.619 10.11 2.65 46.23 2.71
3079 3115 3.711704 TCCAAATCTTTCGAGCCTCCTAT 59.288 43.478 0.00 0.00 0.00 2.57
3128 3164 2.766263 CACTGCTACTTCCCTATGGACA 59.234 50.000 0.00 0.00 41.57 4.02
3129 3165 2.483889 GCACTGCTACTTCCCTATGGAC 60.484 54.545 0.00 0.00 41.57 4.02
3169 3205 3.741860 GCAGATGCCATTCTCCGG 58.258 61.111 0.00 0.00 34.31 5.14
3234 3275 8.951787 ACGTAAAGCATTCCACATATAACTAA 57.048 30.769 0.00 0.00 0.00 2.24
3236 3277 8.951787 TTACGTAAAGCATTCCACATATAACT 57.048 30.769 5.31 0.00 0.00 2.24
3237 3278 9.807386 GATTACGTAAAGCATTCCACATATAAC 57.193 33.333 12.81 0.00 0.00 1.89
3286 3335 2.482796 TACCAGTACTCGGGCCGTCA 62.483 60.000 27.32 6.47 32.18 4.35
3289 3338 1.751927 AGTACCAGTACTCGGGCCG 60.752 63.158 22.51 22.51 42.30 6.13
3360 3651 8.310382 CCTAAACACCAATTTAAATCATCACCA 58.690 33.333 0.10 0.00 0.00 4.17
3432 3723 5.278169 CCTCTCACAGGCAATGCATATAAAC 60.278 44.000 7.79 0.00 34.56 2.01
3490 3782 2.557490 ACTAGACGGAAAGGTCTCACAC 59.443 50.000 0.00 0.00 43.63 3.82
3580 3872 2.611292 GCTTTTCTGATGATGGGACGAG 59.389 50.000 0.00 0.00 0.00 4.18
3581 3873 2.027285 TGCTTTTCTGATGATGGGACGA 60.027 45.455 0.00 0.00 0.00 4.20
3582 3874 2.358957 TGCTTTTCTGATGATGGGACG 58.641 47.619 0.00 0.00 0.00 4.79
3583 3875 4.789012 TTTGCTTTTCTGATGATGGGAC 57.211 40.909 0.00 0.00 0.00 4.46
3584 3876 5.018149 TGATTTGCTTTTCTGATGATGGGA 58.982 37.500 0.00 0.00 0.00 4.37
3585 3877 5.333299 TGATTTGCTTTTCTGATGATGGG 57.667 39.130 0.00 0.00 0.00 4.00
3586 3878 5.287752 CGTTGATTTGCTTTTCTGATGATGG 59.712 40.000 0.00 0.00 0.00 3.51
3587 3879 5.287752 CCGTTGATTTGCTTTTCTGATGATG 59.712 40.000 0.00 0.00 0.00 3.07
3588 3880 5.404946 CCGTTGATTTGCTTTTCTGATGAT 58.595 37.500 0.00 0.00 0.00 2.45
3589 3881 4.321156 CCCGTTGATTTGCTTTTCTGATGA 60.321 41.667 0.00 0.00 0.00 2.92
3590 3882 3.922240 CCCGTTGATTTGCTTTTCTGATG 59.078 43.478 0.00 0.00 0.00 3.07
3591 3883 3.826157 TCCCGTTGATTTGCTTTTCTGAT 59.174 39.130 0.00 0.00 0.00 2.90
3592 3884 3.218453 TCCCGTTGATTTGCTTTTCTGA 58.782 40.909 0.00 0.00 0.00 3.27
3593 3885 3.641437 TCCCGTTGATTTGCTTTTCTG 57.359 42.857 0.00 0.00 0.00 3.02
3594 3886 4.871933 ATTCCCGTTGATTTGCTTTTCT 57.128 36.364 0.00 0.00 0.00 2.52
3595 3887 5.230182 AGAATTCCCGTTGATTTGCTTTTC 58.770 37.500 0.65 0.00 0.00 2.29
3596 3888 5.213891 AGAATTCCCGTTGATTTGCTTTT 57.786 34.783 0.65 0.00 0.00 2.27
3597 3889 4.871933 AGAATTCCCGTTGATTTGCTTT 57.128 36.364 0.65 0.00 0.00 3.51
3598 3890 5.975693 TTAGAATTCCCGTTGATTTGCTT 57.024 34.783 0.65 0.00 0.00 3.91
3599 3891 6.530019 AATTAGAATTCCCGTTGATTTGCT 57.470 33.333 0.65 0.00 0.00 3.91
3600 3892 7.595311 AAAATTAGAATTCCCGTTGATTTGC 57.405 32.000 0.65 0.00 0.00 3.68
3601 3893 7.956943 GCAAAAATTAGAATTCCCGTTGATTTG 59.043 33.333 0.65 7.01 0.00 2.32
3602 3894 7.148656 CGCAAAAATTAGAATTCCCGTTGATTT 60.149 33.333 0.65 0.00 0.00 2.17
3603 3895 6.310224 CGCAAAAATTAGAATTCCCGTTGATT 59.690 34.615 0.65 0.00 0.00 2.57
3604 3896 5.804979 CGCAAAAATTAGAATTCCCGTTGAT 59.195 36.000 0.65 0.00 0.00 2.57
3605 3897 5.157781 CGCAAAAATTAGAATTCCCGTTGA 58.842 37.500 0.65 0.00 0.00 3.18
3606 3898 4.920927 ACGCAAAAATTAGAATTCCCGTTG 59.079 37.500 0.65 0.36 0.00 4.10
3607 3899 4.920927 CACGCAAAAATTAGAATTCCCGTT 59.079 37.500 0.65 0.00 0.00 4.44
3608 3900 4.022676 ACACGCAAAAATTAGAATTCCCGT 60.023 37.500 0.65 0.00 0.00 5.28
3609 3901 4.323336 CACACGCAAAAATTAGAATTCCCG 59.677 41.667 0.65 0.00 0.00 5.14
3610 3902 4.091365 GCACACGCAAAAATTAGAATTCCC 59.909 41.667 0.65 0.00 38.36 3.97
3611 3903 4.923281 AGCACACGCAAAAATTAGAATTCC 59.077 37.500 0.65 0.00 42.27 3.01
3612 3904 6.291385 CAAGCACACGCAAAAATTAGAATTC 58.709 36.000 0.00 0.00 42.27 2.17
3613 3905 5.333263 GCAAGCACACGCAAAAATTAGAATT 60.333 36.000 0.00 0.00 42.27 2.17
3674 3966 4.354587 TGTCGAATCGAATCAGATGACAG 58.645 43.478 7.01 0.00 37.72 3.51
3768 4063 1.429148 GCCGGAATCCATGTCGTGTC 61.429 60.000 5.05 0.00 0.00 3.67
3774 4069 1.140312 ACCATAGCCGGAATCCATGT 58.860 50.000 5.05 0.00 0.00 3.21
3784 4079 2.159254 CCAAACCATGAAACCATAGCCG 60.159 50.000 0.00 0.00 0.00 5.52
3816 4111 5.762045 AGCAGTAGTACAAAATTGTGCAAG 58.238 37.500 15.17 4.72 44.73 4.01
3935 4304 4.273318 GGATGCTATCCCTGTTTCTGTTT 58.727 43.478 4.36 0.00 43.88 2.83
3936 4305 3.891049 GGATGCTATCCCTGTTTCTGTT 58.109 45.455 4.36 0.00 43.88 3.16
3937 4306 3.567478 GGATGCTATCCCTGTTTCTGT 57.433 47.619 4.36 0.00 43.88 3.41
4052 4421 3.009115 CCCCCTCAAGGAAGGCGA 61.009 66.667 0.00 0.00 38.24 5.54


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.