AutoCloner

Multiple sequence alignment - TraesCS3B01G211500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS3B01G211500	chr3B	100.000	5401	0	0	1	5401	250578990	250573590	0.000000e+00	9974.0
1	TraesCS3B01G211500	chr3D	93.728	2264	90	24	750	2977	172032887	172030640	0.000000e+00	3347.0
2	TraesCS3B01G211500	chr3D	94.242	2032	89	18	3059	5082	172030642	172028631	0.000000e+00	3079.0
3	TraesCS3B01G211500	chr3A	92.060	2141	105	29	869	2977	209656799	209654692	0.000000e+00	2952.0
4	TraesCS3B01G211500	chr3A	95.190	1788	76	7	3059	4839	209654694	209652910	0.000000e+00	2817.0
5	TraesCS3B01G211500	chr3A	85.714	154	18	4	667	817	209656959	209656807	5.600000e-35	159.0
6	TraesCS3B01G211500	chrUn	98.730	551	7	0	1	551	14004695	14005245	0.000000e+00	979.0
7	TraesCS3B01G211500	chrUn	98.375	554	9	0	1	554	166753471	166752918	0.000000e+00	974.0
8	TraesCS3B01G211500	chrUn	100.000	87	0	0	579	665	186169588	186169502	1.560000e-35	161.0
9	TraesCS3B01G211500	chrUn	100.000	87	0	0	579	665	247562290	247562376	1.560000e-35	161.0
10	TraesCS3B01G211500	chrUn	100.000	87	0	0	579	665	404402371	404402457	1.560000e-35	161.0
11	TraesCS3B01G211500	chrUn	100.000	87	0	0	579	665	438678402	438678488	1.560000e-35	161.0
12	TraesCS3B01G211500	chrUn	100.000	87	0	0	579	665	438816104	438816190	1.560000e-35	161.0
13	TraesCS3B01G211500	chrUn	100.000	87	0	0	579	665	438858804	438858718	1.560000e-35	161.0
14	TraesCS3B01G211500	chrUn	89.130	46	3	2	5355	5399	461112529	461112485	7.560000e-04	56.5
15	TraesCS3B01G211500	chr5B	98.548	551	7	1	1	551	202155490	202154941	0.000000e+00	972.0
16	TraesCS3B01G211500	chr5B	98.364	550	9	0	2	551	201259111	201258562	0.000000e+00	966.0
17	TraesCS3B01G211500	chr5B	98.192	553	8	1	1	551	217668034	217668586	0.000000e+00	965.0
18	TraesCS3B01G211500	chr5B	98.188	552	9	1	1	552	152533444	152533994	0.000000e+00	963.0
19	TraesCS3B01G211500	chr5B	98.185	551	9	1	1	551	152526604	152527153	0.000000e+00	961.0
20	TraesCS3B01G211500	chr5B	96.000	100	2	1	2963	3062	556628613	556628710	1.560000e-35	161.0
21	TraesCS3B01G211500	chr6B	98.185	551	9	1	1	551	311030461	311031010	0.000000e+00	961.0
22	TraesCS3B01G211500	chr6B	94.393	107	3	3	2963	3066	132894366	132894260	1.560000e-35	161.0
23	TraesCS3B01G211500	chr2B	97.842	556	11	1	3	558	347889861	347889307	0.000000e+00	959.0
24	TraesCS3B01G211500	chr2B	96.907	97	3	0	2966	3062	593680736	593680832	4.330000e-36	163.0
25	TraesCS3B01G211500	chr2B	96.875	96	3	0	2968	3063	77856056	77856151	1.560000e-35	161.0
26	TraesCS3B01G211500	chr2B	89.130	46	3	2	5355	5399	135777443	135777399	7.560000e-04	56.5
27	TraesCS3B01G211500	chr2B	100.000	28	0	0	5179	5206	494858087	494858060	1.000000e-02	52.8
28	TraesCS3B01G211500	chr2B	96.875	32	0	1	5209	5240	566614109	566614079	1.000000e-02	52.8
29	TraesCS3B01G211500	chr7D	97.917	96	2	0	2967	3062	311872943	311872848	3.350000e-37	167.0
30	TraesCS3B01G211500	chr6D	100.000	87	0	0	579	665	283163006	283162920	1.560000e-35	161.0
31	TraesCS3B01G211500	chr6D	100.000	87	0	0	579	665	425969751	425969837	1.560000e-35	161.0
32	TraesCS3B01G211500	chr6D	92.593	108	7	1	2962	3068	459173402	459173509	2.610000e-33	154.0
33	TraesCS3B01G211500	chr6D	97.059	34	0	1	5208	5241	49269680	49269712	7.560000e-04	56.5
34	TraesCS3B01G211500	chr6D	90.698	43	2	2	5355	5396	377452036	377452077	7.560000e-04	56.5
35	TraesCS3B01G211500	chr4D	100.000	87	0	0	579	665	6633497	6633583	1.560000e-35	161.0
36	TraesCS3B01G211500	chr4D	100.000	30	0	0	5205	5234	325747011	325747040	7.560000e-04	56.5
37	TraesCS3B01G211500	chr2D	98.889	90	1	0	2974	3063	113490494	113490405	1.560000e-35	161.0
38	TraesCS3B01G211500	chr7B	95.918	98	2	2	2965	3060	627055484	627055581	2.010000e-34	158.0
39	TraesCS3B01G211500	chr7B	90.909	121	5	6	2945	3062	715302051	715301934	2.010000e-34	158.0
40	TraesCS3B01G211500	chr5A	97.143	35	1	0	5206	5240	12196744	12196778	5.840000e-05	60.2
41	TraesCS3B01G211500	chr5A	89.130	46	3	2	5352	5396	597081482	597081526	7.560000e-04	56.5
42	TraesCS3B01G211500	chr5D	97.059	34	1	0	5205	5238	452674636	452674669	2.100000e-04	58.4
43	TraesCS3B01G211500	chr1D	90.909	44	2	2	5354	5396	255347348	255347390	2.100000e-04	58.4
44	TraesCS3B01G211500	chr4B	89.130	46	3	2	5352	5396	85706585	85706629	7.560000e-04	56.5
45	TraesCS3B01G211500	chr4B	89.130	46	3	2	5355	5399	625856344	625856300	7.560000e-04	56.5
46	TraesCS3B01G211500	chr4A	89.130	46	3	2	5355	5399	490857499	490857455	7.560000e-04	56.5
47	TraesCS3B01G211500	chr2A	100.000	30	0	0	5205	5234	764857585	764857614	7.560000e-04	56.5
48	TraesCS3B01G211500	chr2A	100.000	29	0	0	5179	5207	386009044	386009072	3.000000e-03	54.7
49	TraesCS3B01G211500	chr1A	89.130	46	3	2	5355	5399	481760557	481760513	7.560000e-04	56.5

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS3B01G211500	chr3B	250573590	250578990	5400	True	9974	9974	100.000	1	5401	1	chr3B.!!$R1	5400
1	TraesCS3B01G211500	chr3D	172028631	172032887	4256	True	3213	3347	93.985	750	5082	2	chr3D.!!$R1	4332
2	TraesCS3B01G211500	chr3A	209652910	209656959	4049	True	1976	2952	90.988	667	4839	3	chr3A.!!$R1	4172
3	TraesCS3B01G211500	chrUn	14004695	14005245	550	False	979	979	98.730	1	551	1	chrUn.!!$F1	550
4	TraesCS3B01G211500	chrUn	166752918	166753471	553	True	974	974	98.375	1	554	1	chrUn.!!$R1	553
5	TraesCS3B01G211500	chr5B	202154941	202155490	549	True	972	972	98.548	1	551	1	chr5B.!!$R2	550
6	TraesCS3B01G211500	chr5B	201258562	201259111	549	True	966	966	98.364	2	551	1	chr5B.!!$R1	549
7	TraesCS3B01G211500	chr5B	217668034	217668586	552	False	965	965	98.192	1	551	1	chr5B.!!$F3	550
8	TraesCS3B01G211500	chr5B	152533444	152533994	550	False	963	963	98.188	1	552	1	chr5B.!!$F2	551
9	TraesCS3B01G211500	chr5B	152526604	152527153	549	False	961	961	98.185	1	551	1	chr5B.!!$F1	550
10	TraesCS3B01G211500	chr6B	311030461	311031010	549	False	961	961	98.185	1	551	1	chr6B.!!$F1	550
11	TraesCS3B01G211500	chr2B	347889307	347889861	554	True	959	959	97.842	3	558	1	chr2B.!!$R2	555

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
624	628	0.034477	TTTTCATCGAGCCTTCCCCC	60.034	55.0	0.00	0.00	0.00	5.40	F
658	662	0.035439	CCAAGTGGTAAGGCATCGGT	60.035	55.0	0.00	0.00	0.00	4.69	F
771	777	0.099436	GGTGCTTAAAGGCTCATGCG	59.901	55.0	0.00	0.00	40.82	4.73	F
2296	2338	0.308993	GCCTTGCCGATGATACTTGC	59.691	55.0	0.00	0.00	0.00	4.01	F
3553	3598	0.110295	TACCCTTGCATATGCGGCAT	59.890	50.0	22.21	20.57	45.83	4.40	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
2440	2482	1.203052	CCATGCACGAGCCTCAAAATT	59.797	47.619	1.39	0.00	41.13	1.82	R
2535	2577	2.693797	ATGAGAAAAGTTGCACTGCG	57.306	45.000	0.00	0.00	0.00	5.18	R
2710	2753	5.246307	GCAAGTCTCCCAAATACAGTAAGT	58.754	41.667	0.00	0.00	0.00	2.24	R
4021	4071	1.069227	CGAGCCTTAAGGTTGTGCAAC	60.069	52.381	22.55	6.52	40.45	4.17	R
5236	5293	0.027716	TACAAAGCAAAAACGCGCGA	59.972	45.000	39.36	5.70	36.85	5.87	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
97	101	3.203040	CCCTATCTCTTGTTTCCCCACAT	59.797	47.826	0.00	0.00	0.00	3.21
233	237	5.444122	GCATCTTGTATATTTCGTCCAAGC	58.556	41.667	0.00	0.00	34.07	4.01
559	563	4.590400	GATGTCCTCATCAGAAACAACG	57.410	45.455	3.72	0.00	46.78	4.10
560	564	2.143122	TGTCCTCATCAGAAACAACGC	58.857	47.619	0.00	0.00	0.00	4.84
561	565	1.126846	GTCCTCATCAGAAACAACGCG	59.873	52.381	3.53	3.53	0.00	6.01
562	566	1.000394	TCCTCATCAGAAACAACGCGA	60.000	47.619	15.93	0.00	0.00	5.87
563	567	1.126846	CCTCATCAGAAACAACGCGAC	59.873	52.381	15.93	0.00	0.00	5.19
564	568	2.061773	CTCATCAGAAACAACGCGACT	58.938	47.619	15.93	0.00	0.00	4.18
565	569	2.476619	CTCATCAGAAACAACGCGACTT	59.523	45.455	15.93	0.00	0.00	3.01
566	570	2.475111	TCATCAGAAACAACGCGACTTC	59.525	45.455	15.93	9.54	0.00	3.01
567	571	2.218953	TCAGAAACAACGCGACTTCT	57.781	45.000	15.93	11.77	0.00	2.85
568	572	2.124903	TCAGAAACAACGCGACTTCTC	58.875	47.619	15.93	3.41	0.00	2.87
569	573	1.129326	AGAAACAACGCGACTTCTCG	58.871	50.000	15.93	0.00	43.28	4.04
570	574	1.126079	GAAACAACGCGACTTCTCGA	58.874	50.000	15.93	0.00	43.06	4.04
571	575	1.122680	GAAACAACGCGACTTCTCGAG	59.877	52.381	15.93	5.93	43.06	4.04
572	576	0.309922	AACAACGCGACTTCTCGAGA	59.690	50.000	15.93	12.08	41.82	4.04
573	577	0.385723	ACAACGCGACTTCTCGAGAC	60.386	55.000	16.36	2.69	41.82	3.36
574	578	1.066114	CAACGCGACTTCTCGAGACC	61.066	60.000	16.36	6.61	41.82	3.85
575	579	2.276743	CGCGACTTCTCGAGACCG	60.277	66.667	16.36	18.85	41.82	4.79
576	580	2.868920	GCGACTTCTCGAGACCGT	59.131	61.111	16.36	15.25	43.06	4.83
577	581	1.512310	GCGACTTCTCGAGACCGTG	60.512	63.158	16.36	7.08	43.06	4.94
578	582	1.512310	CGACTTCTCGAGACCGTGC	60.512	63.158	16.36	8.55	43.06	5.34
579	583	1.877367	GACTTCTCGAGACCGTGCT	59.123	57.895	16.36	0.00	37.05	4.40
580	584	0.241481	GACTTCTCGAGACCGTGCTT	59.759	55.000	16.36	0.00	37.05	3.91
581	585	0.241481	ACTTCTCGAGACCGTGCTTC	59.759	55.000	16.36	0.00	37.05	3.86
582	586	0.523966	CTTCTCGAGACCGTGCTTCT	59.476	55.000	16.36	0.00	37.05	2.85
583	587	0.241213	TTCTCGAGACCGTGCTTCTG	59.759	55.000	16.36	0.00	37.05	3.02
584	588	0.605589	TCTCGAGACCGTGCTTCTGA	60.606	55.000	12.08	0.00	37.05	3.27
585	589	0.241213	CTCGAGACCGTGCTTCTGAA	59.759	55.000	6.58	0.00	37.05	3.02
586	590	0.671796	TCGAGACCGTGCTTCTGAAA	59.328	50.000	0.00	0.00	37.05	2.69
587	591	1.067974	TCGAGACCGTGCTTCTGAAAA	59.932	47.619	0.00	0.00	37.05	2.29
588	592	1.864711	CGAGACCGTGCTTCTGAAAAA	59.135	47.619	0.00	0.00	0.00	1.94
589	593	2.480419	CGAGACCGTGCTTCTGAAAAAT	59.520	45.455	0.00	0.00	0.00	1.82
590	594	3.423645	CGAGACCGTGCTTCTGAAAAATC	60.424	47.826	0.00	0.00	0.00	2.17
591	595	3.744660	AGACCGTGCTTCTGAAAAATCT	58.255	40.909	0.00	0.00	0.00	2.40
592	596	4.894784	AGACCGTGCTTCTGAAAAATCTA	58.105	39.130	0.00	0.00	0.00	1.98
593	597	5.491982	AGACCGTGCTTCTGAAAAATCTAT	58.508	37.500	0.00	0.00	0.00	1.98
594	598	6.640518	AGACCGTGCTTCTGAAAAATCTATA	58.359	36.000	0.00	0.00	0.00	1.31
595	599	7.275920	AGACCGTGCTTCTGAAAAATCTATAT	58.724	34.615	0.00	0.00	0.00	0.86
596	600	7.439655	AGACCGTGCTTCTGAAAAATCTATATC	59.560	37.037	0.00	0.00	0.00	1.63
597	601	6.483640	ACCGTGCTTCTGAAAAATCTATATCC	59.516	38.462	0.00	0.00	0.00	2.59
598	602	6.073003	CCGTGCTTCTGAAAAATCTATATCCC	60.073	42.308	0.00	0.00	0.00	3.85
599	603	6.483307	CGTGCTTCTGAAAAATCTATATCCCA	59.517	38.462	0.00	0.00	0.00	4.37
600	604	7.307632	CGTGCTTCTGAAAAATCTATATCCCAG	60.308	40.741	0.00	0.00	0.00	4.45
601	605	6.488006	TGCTTCTGAAAAATCTATATCCCAGC	59.512	38.462	0.00	0.00	0.00	4.85
602	606	6.714356	GCTTCTGAAAAATCTATATCCCAGCT	59.286	38.462	0.00	0.00	0.00	4.24
603	607	7.094848	GCTTCTGAAAAATCTATATCCCAGCTC	60.095	40.741	0.00	0.00	0.00	4.09
604	608	6.459066	TCTGAAAAATCTATATCCCAGCTCG	58.541	40.000	0.00	0.00	0.00	5.03
605	609	6.042093	TCTGAAAAATCTATATCCCAGCTCGT	59.958	38.462	0.00	0.00	0.00	4.18
606	610	6.591935	TGAAAAATCTATATCCCAGCTCGTT	58.408	36.000	0.00	0.00	0.00	3.85
607	611	7.054124	TGAAAAATCTATATCCCAGCTCGTTT	58.946	34.615	0.00	0.00	0.00	3.60
608	612	7.556275	TGAAAAATCTATATCCCAGCTCGTTTT	59.444	33.333	0.00	0.00	0.00	2.43
609	613	7.497925	AAAATCTATATCCCAGCTCGTTTTC	57.502	36.000	0.00	0.00	0.00	2.29
610	614	5.808366	ATCTATATCCCAGCTCGTTTTCA	57.192	39.130	0.00	0.00	0.00	2.69
611	615	5.808366	TCTATATCCCAGCTCGTTTTCAT	57.192	39.130	0.00	0.00	0.00	2.57
612	616	5.784177	TCTATATCCCAGCTCGTTTTCATC	58.216	41.667	0.00	0.00	0.00	2.92
613	617	1.656652	ATCCCAGCTCGTTTTCATCG	58.343	50.000	0.00	0.00	0.00	3.84
614	618	0.606096	TCCCAGCTCGTTTTCATCGA	59.394	50.000	0.00	0.00	35.96	3.59
621	625	1.661112	CTCGTTTTCATCGAGCCTTCC	59.339	52.381	2.59	0.00	45.77	3.46
622	626	0.727398	CGTTTTCATCGAGCCTTCCC	59.273	55.000	0.00	0.00	0.00	3.97
623	627	1.095600	GTTTTCATCGAGCCTTCCCC	58.904	55.000	0.00	0.00	0.00	4.81
624	628	0.034477	TTTTCATCGAGCCTTCCCCC	60.034	55.000	0.00	0.00	0.00	5.40
639	643	3.700198	CCCCCGTTTGGAGTATAGC	57.300	57.895	0.00	0.00	37.49	2.97
640	644	0.108019	CCCCCGTTTGGAGTATAGCC	59.892	60.000	0.00	0.00	37.49	3.93
641	645	0.834612	CCCCGTTTGGAGTATAGCCA	59.165	55.000	0.00	0.00	37.49	4.75
642	646	1.210967	CCCCGTTTGGAGTATAGCCAA	59.789	52.381	3.45	3.45	43.31	4.52
643	647	2.561569	CCCGTTTGGAGTATAGCCAAG	58.438	52.381	6.99	0.00	45.39	3.61
644	648	2.093128	CCCGTTTGGAGTATAGCCAAGT	60.093	50.000	6.99	0.00	45.39	3.16
645	649	2.936498	CCGTTTGGAGTATAGCCAAGTG	59.064	50.000	6.99	4.79	45.39	3.16
646	650	2.936498	CGTTTGGAGTATAGCCAAGTGG	59.064	50.000	6.99	0.00	45.39	4.00
647	651	3.618997	CGTTTGGAGTATAGCCAAGTGGT	60.619	47.826	6.99	0.00	45.39	4.16
648	652	4.382254	CGTTTGGAGTATAGCCAAGTGGTA	60.382	45.833	6.99	0.00	45.39	3.25
649	653	5.493809	GTTTGGAGTATAGCCAAGTGGTAA	58.506	41.667	6.99	0.00	45.39	2.85
650	654	5.353394	TTGGAGTATAGCCAAGTGGTAAG	57.647	43.478	0.00	0.00	40.32	2.34
651	655	3.709653	TGGAGTATAGCCAAGTGGTAAGG	59.290	47.826	0.00	0.00	37.57	2.69
652	656	8.762559	TTTGGAGTATAGCCAAGTGGTAAGGC	62.763	46.154	6.99	0.00	45.39	4.35
657	661	2.780595	CCAAGTGGTAAGGCATCGG	58.219	57.895	0.00	0.00	0.00	4.18
658	662	0.035439	CCAAGTGGTAAGGCATCGGT	60.035	55.000	0.00	0.00	0.00	4.69
659	663	1.613255	CCAAGTGGTAAGGCATCGGTT	60.613	52.381	0.00	0.00	0.00	4.44
660	664	2.159382	CAAGTGGTAAGGCATCGGTTT	58.841	47.619	0.00	0.00	0.00	3.27
661	665	2.556622	CAAGTGGTAAGGCATCGGTTTT	59.443	45.455	0.00	0.00	0.00	2.43
662	666	2.871453	AGTGGTAAGGCATCGGTTTTT	58.129	42.857	0.00	0.00	0.00	1.94
663	667	2.556622	AGTGGTAAGGCATCGGTTTTTG	59.443	45.455	0.00	0.00	0.00	2.44
664	668	1.889829	TGGTAAGGCATCGGTTTTTGG	59.110	47.619	0.00	0.00	0.00	3.28
665	669	1.203758	GGTAAGGCATCGGTTTTTGGG	59.796	52.381	0.00	0.00	0.00	4.12
675	679	2.517402	TTTTTGGGCCTCGCGTGT	60.517	55.556	5.77	0.00	0.00	4.49
683	687	4.554363	CCTCGCGTGTAGCCTCCG	62.554	72.222	5.77	0.00	44.76	4.63
691	695	4.752879	GTAGCCTCCGCCACGCAA	62.753	66.667	0.00	0.00	34.57	4.85
692	696	3.781307	TAGCCTCCGCCACGCAAT	61.781	61.111	0.00	0.00	34.57	3.56
710	714	2.216750	ATTGCCACAAGGTGCATCGC	62.217	55.000	0.00	0.00	37.19	4.58
715	719	3.869272	CAAGGTGCATCGCTCGGC	61.869	66.667	0.00	0.00	0.00	5.54
722	726	2.664185	CATCGCTCGGCCTGGATG	60.664	66.667	0.00	4.52	0.00	3.51
723	727	4.615815	ATCGCTCGGCCTGGATGC	62.616	66.667	0.00	0.00	0.00	3.91
729	733	2.516930	CGGCCTGGATGCGGAAAT	60.517	61.111	0.00	0.00	33.80	2.17
759	765	0.833287	GCCAGATCCAGAGGTGCTTA	59.167	55.000	0.00	0.00	0.00	3.09
764	770	2.092699	AGATCCAGAGGTGCTTAAAGGC	60.093	50.000	0.00	0.00	0.00	4.35
771	777	0.099436	GGTGCTTAAAGGCTCATGCG	59.901	55.000	0.00	0.00	40.82	4.73
841	848	2.496297	AGAGTTCATGGATGGGATGGT	58.504	47.619	0.00	0.00	0.00	3.55
842	849	2.174210	AGAGTTCATGGATGGGATGGTG	59.826	50.000	0.00	0.00	0.00	4.17
843	850	1.925255	AGTTCATGGATGGGATGGTGT	59.075	47.619	0.00	0.00	0.00	4.16
844	851	2.092212	AGTTCATGGATGGGATGGTGTC	60.092	50.000	0.00	0.00	0.00	3.67
846	853	0.848735	CATGGATGGGATGGTGTCCT	59.151	55.000	0.00	0.00	46.91	3.85
847	854	1.216175	CATGGATGGGATGGTGTCCTT	59.784	52.381	0.00	0.00	46.91	3.36
848	855	1.381867	TGGATGGGATGGTGTCCTTT	58.618	50.000	0.00	0.00	46.91	3.11
849	856	1.715931	TGGATGGGATGGTGTCCTTTT	59.284	47.619	0.00	0.00	46.91	2.27
850	857	2.111613	TGGATGGGATGGTGTCCTTTTT	59.888	45.455	0.00	0.00	46.91	1.94
1073	1082	1.392589	CATCCCCACTCCCAAATTCG	58.607	55.000	0.00	0.00	0.00	3.34
1112	1121	3.092511	GATCCAGGCAGCCTCCCA	61.093	66.667	12.53	0.00	0.00	4.37
1330	1348	2.817396	GAGAACGCTGGCTCAGGC	60.817	66.667	0.00	0.00	37.82	4.85
1628	1657	1.675641	GATGGCGGGTGAAAGCACT	60.676	57.895	0.00	0.00	44.52	4.40
1814	1847	9.013490	CCATCGTTGATTATTTTTCAGAACATC	57.987	33.333	0.00	0.00	0.00	3.06
1834	1867	7.830099	ACATCCTTTTCTTGAATGTTCTTCT	57.170	32.000	0.00	0.00	0.00	2.85
1856	1889	7.273320	TCTATACACCTGCAGTCTATGTTAC	57.727	40.000	13.81	0.00	0.00	2.50
2240	2282	6.094603	GGATGCATTTTAGAGTTGACAGTCAT	59.905	38.462	3.45	0.00	0.00	3.06
2283	2325	5.456822	CGATAGCTTTCTTTTAATGCCTTGC	59.543	40.000	0.00	0.00	0.00	4.01
2296	2338	0.308993	GCCTTGCCGATGATACTTGC	59.691	55.000	0.00	0.00	0.00	4.01
2298	2340	2.224606	CCTTGCCGATGATACTTGCAT	58.775	47.619	0.00	0.00	0.00	3.96
2370	2412	2.568546	TGGCAGAGATAGGGAAGGAA	57.431	50.000	0.00	0.00	0.00	3.36
2420	2462	3.334583	TCTTCCACAGGTGCTTGATAC	57.665	47.619	0.00	0.00	0.00	2.24
2440	2482	7.342581	TGATACTACCCATCTTGCAAATTGTA	58.657	34.615	0.00	0.00	0.00	2.41
2535	2577	5.163754	GGTTATCCGCATAATTCCATACAGC	60.164	44.000	0.00	0.00	0.00	4.40
2600	2642	3.451178	TCTCCTTGCTACCAATAGTCACC	59.549	47.826	0.00	0.00	0.00	4.02
2710	2753	2.247699	TCCGGAGAAAGGATGGAGAA	57.752	50.000	0.00	0.00	31.86	2.87
2825	2868	5.240623	TGGCTGTTCGTTTTCAGTTTCATAT	59.759	36.000	0.00	0.00	34.57	1.78
2847	2890	5.152623	TGTCAAAATTGGTTGTGTTTCCA	57.847	34.783	0.00	0.00	0.00	3.53
2980	3023	8.015185	TGTCACAGGTAATAACTATTACTCCC	57.985	38.462	15.73	3.99	44.55	4.30
2981	3024	7.842743	TGTCACAGGTAATAACTATTACTCCCT	59.157	37.037	15.73	5.77	44.55	4.20
2982	3025	8.358895	GTCACAGGTAATAACTATTACTCCCTC	58.641	40.741	15.73	3.43	44.55	4.30
2983	3026	7.508296	TCACAGGTAATAACTATTACTCCCTCC	59.492	40.741	15.73	2.88	44.55	4.30
2984	3027	6.492772	ACAGGTAATAACTATTACTCCCTCCG	59.507	42.308	15.73	2.19	44.55	4.63
2985	3028	6.492772	CAGGTAATAACTATTACTCCCTCCGT	59.507	42.308	15.73	0.00	44.55	4.69
2986	3029	7.015001	CAGGTAATAACTATTACTCCCTCCGTT	59.985	40.741	15.73	0.00	44.55	4.44
2987	3030	7.232330	AGGTAATAACTATTACTCCCTCCGTTC	59.768	40.741	15.73	0.77	44.55	3.95
2988	3031	6.416631	AATAACTATTACTCCCTCCGTTCC	57.583	41.667	0.00	0.00	0.00	3.62
2989	3032	3.393426	ACTATTACTCCCTCCGTTCCA	57.607	47.619	0.00	0.00	0.00	3.53
2990	3033	3.716431	ACTATTACTCCCTCCGTTCCAA	58.284	45.455	0.00	0.00	0.00	3.53
2991	3034	4.098894	ACTATTACTCCCTCCGTTCCAAA	58.901	43.478	0.00	0.00	0.00	3.28
2992	3035	4.533311	ACTATTACTCCCTCCGTTCCAAAA	59.467	41.667	0.00	0.00	0.00	2.44
2993	3036	4.586306	ATTACTCCCTCCGTTCCAAAAT	57.414	40.909	0.00	0.00	0.00	1.82
2994	3037	5.703730	ATTACTCCCTCCGTTCCAAAATA	57.296	39.130	0.00	0.00	0.00	1.40
2995	3038	3.629142	ACTCCCTCCGTTCCAAAATAG	57.371	47.619	0.00	0.00	0.00	1.73
2996	3039	3.178865	ACTCCCTCCGTTCCAAAATAGA	58.821	45.455	0.00	0.00	0.00	1.98
2997	3040	3.780850	ACTCCCTCCGTTCCAAAATAGAT	59.219	43.478	0.00	0.00	0.00	1.98
2998	3041	4.130118	CTCCCTCCGTTCCAAAATAGATG	58.870	47.826	0.00	0.00	0.00	2.90
2999	3042	3.778075	TCCCTCCGTTCCAAAATAGATGA	59.222	43.478	0.00	0.00	0.00	2.92
3000	3043	3.877508	CCCTCCGTTCCAAAATAGATGAC	59.122	47.826	0.00	0.00	0.00	3.06
3001	3044	4.384208	CCCTCCGTTCCAAAATAGATGACT	60.384	45.833	0.00	0.00	0.00	3.41
3002	3045	4.811557	CCTCCGTTCCAAAATAGATGACTC	59.188	45.833	0.00	0.00	0.00	3.36
3003	3046	5.414789	TCCGTTCCAAAATAGATGACTCA	57.585	39.130	0.00	0.00	0.00	3.41
3004	3047	5.800296	TCCGTTCCAAAATAGATGACTCAA	58.200	37.500	0.00	0.00	0.00	3.02
3005	3048	5.642063	TCCGTTCCAAAATAGATGACTCAAC	59.358	40.000	0.00	0.00	0.00	3.18
3006	3049	5.643777	CCGTTCCAAAATAGATGACTCAACT	59.356	40.000	0.00	0.00	0.00	3.16
3007	3050	6.149474	CCGTTCCAAAATAGATGACTCAACTT	59.851	38.462	0.00	0.00	0.00	2.66
3008	3051	7.308589	CCGTTCCAAAATAGATGACTCAACTTT	60.309	37.037	0.00	0.00	0.00	2.66
3009	3052	8.717821	CGTTCCAAAATAGATGACTCAACTTTA	58.282	33.333	0.00	0.00	0.00	1.85
3035	3078	9.716531	ATACTAACTTTAGTACAAAGTTGGGTC	57.283	33.333	28.62	0.00	46.38	4.46
3036	3079	7.567458	ACTAACTTTAGTACAAAGTTGGGTCA	58.433	34.615	28.62	17.50	46.38	4.02
3037	3080	8.215736	ACTAACTTTAGTACAAAGTTGGGTCAT	58.784	33.333	28.62	17.19	46.38	3.06
3038	3081	7.506328	AACTTTAGTACAAAGTTGGGTCATC	57.494	36.000	23.48	0.00	45.58	2.92
3039	3082	6.838382	ACTTTAGTACAAAGTTGGGTCATCT	58.162	36.000	14.04	0.00	37.18	2.90
3040	3083	7.970102	ACTTTAGTACAAAGTTGGGTCATCTA	58.030	34.615	14.04	0.00	37.18	1.98
3041	3084	8.603304	ACTTTAGTACAAAGTTGGGTCATCTAT	58.397	33.333	14.04	0.00	37.18	1.98
3042	3085	9.449719	CTTTAGTACAAAGTTGGGTCATCTATT	57.550	33.333	0.00	0.00	0.00	1.73
3043	3086	9.802039	TTTAGTACAAAGTTGGGTCATCTATTT	57.198	29.630	0.00	0.00	0.00	1.40
3044	3087	9.802039	TTAGTACAAAGTTGGGTCATCTATTTT	57.198	29.630	0.00	0.00	0.00	1.82
3045	3088	8.110860	AGTACAAAGTTGGGTCATCTATTTTG	57.889	34.615	0.00	0.00	0.00	2.44
3046	3089	6.345096	ACAAAGTTGGGTCATCTATTTTGG	57.655	37.500	0.00	0.00	0.00	3.28
3047	3090	6.074648	ACAAAGTTGGGTCATCTATTTTGGA	58.925	36.000	0.00	0.00	0.00	3.53
3048	3091	6.553100	ACAAAGTTGGGTCATCTATTTTGGAA	59.447	34.615	0.00	0.00	0.00	3.53
3049	3092	6.590234	AAGTTGGGTCATCTATTTTGGAAC	57.410	37.500	0.00	0.00	0.00	3.62
3050	3093	4.700213	AGTTGGGTCATCTATTTTGGAACG	59.300	41.667	0.00	0.00	0.00	3.95
3051	3094	3.616219	TGGGTCATCTATTTTGGAACGG	58.384	45.455	0.00	0.00	0.00	4.44
3052	3095	3.264706	TGGGTCATCTATTTTGGAACGGA	59.735	43.478	0.00	0.00	0.00	4.69
3053	3096	3.877508	GGGTCATCTATTTTGGAACGGAG	59.122	47.826	0.00	0.00	0.00	4.63
3054	3097	3.877508	GGTCATCTATTTTGGAACGGAGG	59.122	47.826	0.00	0.00	0.00	4.30
3055	3098	3.877508	GTCATCTATTTTGGAACGGAGGG	59.122	47.826	0.00	0.00	0.00	4.30
3056	3099	3.778075	TCATCTATTTTGGAACGGAGGGA	59.222	43.478	0.00	0.00	0.00	4.20
3057	3100	3.906720	TCTATTTTGGAACGGAGGGAG	57.093	47.619	0.00	0.00	0.00	4.30
3058	3101	3.178865	TCTATTTTGGAACGGAGGGAGT	58.821	45.455	0.00	0.00	0.00	3.85
3059	3102	4.355549	TCTATTTTGGAACGGAGGGAGTA	58.644	43.478	0.00	0.00	0.00	2.59
3060	3103	2.845363	TTTTGGAACGGAGGGAGTAC	57.155	50.000	0.00	0.00	0.00	2.73
3066	3109	2.027469	GGAACGGAGGGAGTACAAACAT	60.027	50.000	0.00	0.00	0.00	2.71
3078	3121	9.975218	AGGGAGTACAAACATAAATTTCTGTAT	57.025	29.630	9.37	2.51	0.00	2.29
3102	3146	3.374988	TCGAACTGGCATTTCATGATGAC	59.625	43.478	16.46	0.00	35.53	3.06
3143	3187	2.399916	ACATGCTGAGAGAAGAAGGC	57.600	50.000	0.00	0.00	0.00	4.35
3245	3289	4.421131	ACCTGTGAGATCCTTTCTACTGT	58.579	43.478	0.00	0.00	33.74	3.55
3489	3534	3.514706	TGCAAATGAAAGGCACACCATAT	59.485	39.130	0.00	0.00	39.06	1.78
3520	3565	0.886490	CGATGCCATTCCAGGTAGCC	60.886	60.000	0.00	0.00	0.00	3.93
3531	3576	2.093658	TCCAGGTAGCCGAGTGAATTTC	60.094	50.000	0.00	0.00	0.00	2.17
3553	3598	0.110295	TACCCTTGCATATGCGGCAT	59.890	50.000	22.21	20.57	45.83	4.40
3623	3668	8.414003	TGTGTACAATGTTATTTGCCACTTTTA	58.586	29.630	0.00	0.00	34.95	1.52
3633	3678	9.869757	GTTATTTGCCACTTTTAACCATTCTAT	57.130	29.630	0.00	0.00	0.00	1.98
3652	3697	6.715347	TCTATGTACTCATTAGCAGCTTGA	57.285	37.500	0.00	0.00	35.70	3.02
3871	3921	3.836949	AGCATCATGTTTTAACTTGCCG	58.163	40.909	0.00	0.43	34.95	5.69
4178	4230	7.446319	GGTCCTAACTTACAGTGGTTTTTGTAT	59.554	37.037	0.00	0.00	30.53	2.29
4275	4328	4.866486	GGCTTTAGCTAGCGTTAGTACAAA	59.134	41.667	9.55	5.36	42.15	2.83
4357	4410	9.681062	CTCCAGAAAGTTTATCCCTATGTTTTA	57.319	33.333	0.00	0.00	0.00	1.52
4396	4449	3.567478	ACAATGGAGAGCTTGGATACC	57.433	47.619	0.00	0.00	0.00	2.73
4430	4486	4.101119	AGGTACACCCTGAGCATAATACAC	59.899	45.833	0.00	0.00	44.08	2.90
4491	4547	4.056050	CTGTAATACCGGTCTTGTATGCC	58.944	47.826	12.40	0.00	0.00	4.40
4531	4587	5.180868	GCCGATGAATGATTCTTAGCTTCAT	59.819	40.000	6.73	0.00	38.80	2.57
4589	4645	1.511305	CTTGAGCTGCATGGCCTTG	59.489	57.895	14.22	14.22	0.00	3.61
4653	4709	2.319438	AGGGAGAGGAGGGTATTTCTGT	59.681	50.000	0.00	0.00	0.00	3.41
4654	4710	3.116174	GGGAGAGGAGGGTATTTCTGTT	58.884	50.000	0.00	0.00	0.00	3.16
4705	4761	7.931275	AGTATTTGTTTGTCCTTCTTCAAGAC	58.069	34.615	0.00	0.00	0.00	3.01
4711	4767	6.126883	TGTTTGTCCTTCTTCAAGACCTAGAA	60.127	38.462	0.00	0.00	0.00	2.10
4815	4871	5.640357	GCATGTCAATTGTCATGGTGAAATT	59.360	36.000	32.44	5.98	40.33	1.82
4847	4903	8.115384	CCAGATCATATTATGAAATGGGGGTTA	58.885	37.037	21.78	0.00	43.50	2.85
4857	4914	5.630121	TGAAATGGGGGTTATATACTGCTG	58.370	41.667	0.00	0.00	0.00	4.41
4872	4929	0.040058	TGCTGGAATTGGATGCCACT	59.960	50.000	0.00	0.00	30.78	4.00
4873	4930	1.188863	GCTGGAATTGGATGCCACTT	58.811	50.000	0.00	0.00	30.78	3.16
4874	4931	1.134907	GCTGGAATTGGATGCCACTTG	60.135	52.381	0.00	0.00	30.78	3.16
4875	4932	2.449464	CTGGAATTGGATGCCACTTGA	58.551	47.619	0.00	0.00	30.78	3.02
4876	4933	2.165030	CTGGAATTGGATGCCACTTGAC	59.835	50.000	0.00	0.00	30.78	3.18
4877	4934	2.225091	TGGAATTGGATGCCACTTGACT	60.225	45.455	0.00	0.00	30.78	3.41
4894	4951	6.825213	CACTTGACTGGATGATCTGGAATAAA	59.175	38.462	0.00	0.00	0.00	1.40
4901	4958	7.291885	ACTGGATGATCTGGAATAAATCTCTCA	59.708	37.037	0.00	0.00	0.00	3.27
4909	4966	4.102210	TGGAATAAATCTCTCAGGCCTCAG	59.898	45.833	0.00	0.00	0.00	3.35
4912	4969	1.494960	AATCTCTCAGGCCTCAGTCC	58.505	55.000	0.00	0.00	0.00	3.85
4922	4979	1.606601	CCTCAGTCCCACCTGACGA	60.607	63.158	0.00	0.00	40.26	4.20
4932	4989	3.250323	CCTGACGATGTGCGCTCG	61.250	66.667	15.03	15.03	46.04	5.03
4939	4996	1.617755	CGATGTGCGCTCGAACACTT	61.618	55.000	11.68	7.46	36.34	3.16
4943	5000	2.243957	TGCGCTCGAACACTTGTGG	61.244	57.895	9.73	0.00	0.00	4.17
4944	5001	2.551270	CGCTCGAACACTTGTGGC	59.449	61.111	5.72	0.00	0.00	5.01
4945	5002	2.243957	CGCTCGAACACTTGTGGCA	61.244	57.895	5.72	0.00	0.00	4.92
4947	5004	1.845809	GCTCGAACACTTGTGGCAGG	61.846	60.000	5.72	0.00	0.00	4.85
4948	5005	1.845809	CTCGAACACTTGTGGCAGGC	61.846	60.000	5.72	0.00	0.00	4.85
4949	5006	1.893808	CGAACACTTGTGGCAGGCT	60.894	57.895	5.72	0.00	0.00	4.58
4950	5007	0.602638	CGAACACTTGTGGCAGGCTA	60.603	55.000	5.72	0.00	0.00	3.93
4951	5008	1.160137	GAACACTTGTGGCAGGCTAG	58.840	55.000	5.72	0.00	0.00	3.42
4952	5009	0.474184	AACACTTGTGGCAGGCTAGT	59.526	50.000	5.72	0.00	0.00	2.57
4953	5010	0.250467	ACACTTGTGGCAGGCTAGTG	60.250	55.000	14.78	14.78	42.43	2.74
4954	5011	0.035317	CACTTGTGGCAGGCTAGTGA	59.965	55.000	12.18	0.00	40.39	3.41
4955	5012	0.322975	ACTTGTGGCAGGCTAGTGAG	59.677	55.000	0.00	0.00	0.00	3.51
4956	5013	0.392193	CTTGTGGCAGGCTAGTGAGG	60.392	60.000	0.00	0.00	0.00	3.86
4968	5025	0.907704	TAGTGAGGCCGTGGTTCCAT	60.908	55.000	0.00	0.00	0.00	3.41
5008	5065	3.924918	GAGCATCTCCAATAGCTCGTA	57.075	47.619	0.00	0.00	43.27	3.43
5009	5066	3.570559	GAGCATCTCCAATAGCTCGTAC	58.429	50.000	0.00	0.00	43.27	3.67
5010	5067	2.959030	AGCATCTCCAATAGCTCGTACA	59.041	45.455	0.00	0.00	30.05	2.90
5012	5069	4.119862	GCATCTCCAATAGCTCGTACAAA	58.880	43.478	0.00	0.00	0.00	2.83
5038	5095	7.610305	ACGGGTTGTTTATGAGATAAAGACAAT	59.390	33.333	0.00	0.00	35.56	2.71
5078	5135	6.398234	TCTTCAGCAGATTGTCTATAGGAC	57.602	41.667	0.00	0.00	44.70	3.85
5094	5151	9.988815	GTCTATAGGACAATACATTTGATCAGT	57.011	33.333	0.00	0.00	43.94	3.41
5098	5155	7.383102	AGGACAATACATTTGATCAGTTGTC	57.617	36.000	13.91	16.29	41.74	3.18
5100	5157	7.383102	GACAATACATTTGATCAGTTGTCCT	57.617	36.000	13.91	3.63	38.50	3.85
5101	5158	7.765695	ACAATACATTTGATCAGTTGTCCTT	57.234	32.000	13.91	8.22	0.00	3.36
5102	5159	7.596494	ACAATACATTTGATCAGTTGTCCTTG	58.404	34.615	20.00	20.00	0.00	3.61
5103	5160	7.231317	ACAATACATTTGATCAGTTGTCCTTGT	59.769	33.333	20.73	20.73	0.00	3.16
5104	5161	5.695851	ACATTTGATCAGTTGTCCTTGTC	57.304	39.130	6.75	0.00	0.00	3.18
5105	5162	4.520492	ACATTTGATCAGTTGTCCTTGTCC	59.480	41.667	6.75	0.00	0.00	4.02
5106	5163	2.859165	TGATCAGTTGTCCTTGTCCC	57.141	50.000	0.00	0.00	0.00	4.46
5107	5164	2.338809	TGATCAGTTGTCCTTGTCCCT	58.661	47.619	0.00	0.00	0.00	4.20
5108	5165	3.516586	TGATCAGTTGTCCTTGTCCCTA	58.483	45.455	0.00	0.00	0.00	3.53
5109	5166	4.104086	TGATCAGTTGTCCTTGTCCCTAT	58.896	43.478	0.00	0.00	0.00	2.57
5110	5167	5.277250	TGATCAGTTGTCCTTGTCCCTATA	58.723	41.667	0.00	0.00	0.00	1.31
5111	5168	5.128827	TGATCAGTTGTCCTTGTCCCTATAC	59.871	44.000	0.00	0.00	0.00	1.47
5112	5169	3.773119	TCAGTTGTCCTTGTCCCTATACC	59.227	47.826	0.00	0.00	0.00	2.73
5113	5170	3.775316	CAGTTGTCCTTGTCCCTATACCT	59.225	47.826	0.00	0.00	0.00	3.08
5114	5171	4.960469	CAGTTGTCCTTGTCCCTATACCTA	59.040	45.833	0.00	0.00	0.00	3.08
5115	5172	5.602978	CAGTTGTCCTTGTCCCTATACCTAT	59.397	44.000	0.00	0.00	0.00	2.57
5116	5173	5.602978	AGTTGTCCTTGTCCCTATACCTATG	59.397	44.000	0.00	0.00	0.00	2.23
5117	5174	5.412617	TGTCCTTGTCCCTATACCTATGA	57.587	43.478	0.00	0.00	0.00	2.15
5118	5175	5.394738	TGTCCTTGTCCCTATACCTATGAG	58.605	45.833	0.00	0.00	0.00	2.90
5119	5176	4.221041	GTCCTTGTCCCTATACCTATGAGC	59.779	50.000	0.00	0.00	0.00	4.26
5120	5177	4.140782	TCCTTGTCCCTATACCTATGAGCA	60.141	45.833	0.00	0.00	0.00	4.26
5121	5178	4.021016	CCTTGTCCCTATACCTATGAGCAC	60.021	50.000	0.00	0.00	0.00	4.40
5122	5179	3.507411	TGTCCCTATACCTATGAGCACC	58.493	50.000	0.00	0.00	0.00	5.01
5123	5180	3.142217	TGTCCCTATACCTATGAGCACCT	59.858	47.826	0.00	0.00	0.00	4.00
5124	5181	4.161102	GTCCCTATACCTATGAGCACCTT	58.839	47.826	0.00	0.00	0.00	3.50
5125	5182	5.162914	TGTCCCTATACCTATGAGCACCTTA	60.163	44.000	0.00	0.00	0.00	2.69
5126	5183	5.419471	GTCCCTATACCTATGAGCACCTTAG	59.581	48.000	0.00	0.00	0.00	2.18
5127	5184	5.315109	TCCCTATACCTATGAGCACCTTAGA	59.685	44.000	0.00	0.00	0.00	2.10
5128	5185	5.654650	CCCTATACCTATGAGCACCTTAGAG	59.345	48.000	0.00	0.00	0.00	2.43
5129	5186	6.486056	CCTATACCTATGAGCACCTTAGAGA	58.514	44.000	0.00	0.00	0.00	3.10
5130	5187	6.601613	CCTATACCTATGAGCACCTTAGAGAG	59.398	46.154	0.00	0.00	0.00	3.20
5131	5188	4.528076	ACCTATGAGCACCTTAGAGAGA	57.472	45.455	0.00	0.00	0.00	3.10
5132	5189	4.211920	ACCTATGAGCACCTTAGAGAGAC	58.788	47.826	0.00	0.00	0.00	3.36
5133	5190	4.079443	ACCTATGAGCACCTTAGAGAGACT	60.079	45.833	0.00	0.00	0.00	3.24
5134	5191	5.132985	ACCTATGAGCACCTTAGAGAGACTA	59.867	44.000	0.00	0.00	0.00	2.59
5135	5192	6.065374	CCTATGAGCACCTTAGAGAGACTAA	58.935	44.000	0.00	0.00	38.56	2.24
5145	5202	1.944024	AGAGAGACTAAGCCATCGTCG	59.056	52.381	0.00	0.00	33.10	5.12
5146	5203	1.941294	GAGAGACTAAGCCATCGTCGA	59.059	52.381	0.00	0.00	33.10	4.20
5147	5204	2.355132	GAGAGACTAAGCCATCGTCGAA	59.645	50.000	0.00	0.00	33.10	3.71
5148	5205	2.753452	AGAGACTAAGCCATCGTCGAAA	59.247	45.455	0.00	0.00	33.10	3.46
5149	5206	3.192844	AGAGACTAAGCCATCGTCGAAAA	59.807	43.478	0.00	0.00	33.10	2.29
5150	5207	3.512680	AGACTAAGCCATCGTCGAAAAG	58.487	45.455	0.00	0.00	33.10	2.27
5151	5208	3.056749	AGACTAAGCCATCGTCGAAAAGT	60.057	43.478	0.00	0.00	33.10	2.66
5152	5209	3.251571	ACTAAGCCATCGTCGAAAAGTC	58.748	45.455	0.00	0.00	0.00	3.01
5153	5210	2.457366	AAGCCATCGTCGAAAAGTCT	57.543	45.000	0.00	0.00	0.00	3.24
5154	5211	1.714794	AGCCATCGTCGAAAAGTCTG	58.285	50.000	0.00	0.00	0.00	3.51
5155	5212	1.272490	AGCCATCGTCGAAAAGTCTGA	59.728	47.619	0.00	0.00	0.00	3.27
5156	5213	2.066262	GCCATCGTCGAAAAGTCTGAA	58.934	47.619	0.00	0.00	0.00	3.02
5157	5214	2.478894	GCCATCGTCGAAAAGTCTGAAA	59.521	45.455	0.00	0.00	0.00	2.69
5158	5215	3.125316	GCCATCGTCGAAAAGTCTGAAAT	59.875	43.478	0.00	0.00	0.00	2.17
5159	5216	4.328983	GCCATCGTCGAAAAGTCTGAAATA	59.671	41.667	0.00	0.00	0.00	1.40
5160	5217	5.163893	GCCATCGTCGAAAAGTCTGAAATAA	60.164	40.000	0.00	0.00	0.00	1.40
5161	5218	6.619874	GCCATCGTCGAAAAGTCTGAAATAAA	60.620	38.462	0.00	0.00	0.00	1.40
5162	5219	7.464358	CCATCGTCGAAAAGTCTGAAATAAAT	58.536	34.615	0.00	0.00	0.00	1.40
5163	5220	7.962918	CCATCGTCGAAAAGTCTGAAATAAATT	59.037	33.333	0.00	0.00	0.00	1.82
5164	5221	8.989767	CATCGTCGAAAAGTCTGAAATAAATTC	58.010	33.333	0.00	0.00	38.60	2.17
5165	5222	8.078959	TCGTCGAAAAGTCTGAAATAAATTCA	57.921	30.769	0.00	0.00	45.71	2.57
5188	5245	9.909644	TTCAAATGTCAAGTCTAAGTCTAGTAC	57.090	33.333	0.00	0.00	0.00	2.73
5189	5246	9.298250	TCAAATGTCAAGTCTAAGTCTAGTACT	57.702	33.333	0.00	0.00	41.49	2.73
5200	5257	4.129317	AGTCTAGTACTTGAACCCTGGT	57.871	45.455	8.65	0.00	33.35	4.00
5201	5258	3.833070	AGTCTAGTACTTGAACCCTGGTG	59.167	47.826	8.65	0.00	33.35	4.17
5202	5259	3.056035	GTCTAGTACTTGAACCCTGGTGG	60.056	52.174	8.65	0.00	41.37	4.61
5212	5269	3.568578	CCTGGTGGGCTATCCTCC	58.431	66.667	0.00	0.00	46.71	4.30
5213	5270	1.074167	CCTGGTGGGCTATCCTCCT	60.074	63.158	4.99	0.00	46.67	3.69
5214	5271	0.191064	CCTGGTGGGCTATCCTCCTA	59.809	60.000	4.99	0.00	46.67	2.94
5215	5272	1.414538	CCTGGTGGGCTATCCTCCTAA	60.415	57.143	4.99	0.00	46.67	2.69
5216	5273	1.694696	CTGGTGGGCTATCCTCCTAAC	59.305	57.143	4.99	0.00	46.67	2.34
5217	5274	1.057471	GGTGGGCTATCCTCCTAACC	58.943	60.000	0.00	0.00	43.95	2.85
5218	5275	1.694693	GGTGGGCTATCCTCCTAACCA	60.695	57.143	0.00	0.00	43.95	3.67
5219	5276	2.339769	GTGGGCTATCCTCCTAACCAT	58.660	52.381	0.00	0.00	36.20	3.55
5220	5277	2.303311	GTGGGCTATCCTCCTAACCATC	59.697	54.545	0.00	0.00	36.20	3.51
5221	5278	1.909986	GGGCTATCCTCCTAACCATCC	59.090	57.143	0.00	0.00	0.00	3.51
5222	5279	2.621070	GGCTATCCTCCTAACCATCCA	58.379	52.381	0.00	0.00	0.00	3.41
5223	5280	2.979678	GGCTATCCTCCTAACCATCCAA	59.020	50.000	0.00	0.00	0.00	3.53
5224	5281	3.244596	GGCTATCCTCCTAACCATCCAAC	60.245	52.174	0.00	0.00	0.00	3.77
5225	5282	3.244596	GCTATCCTCCTAACCATCCAACC	60.245	52.174	0.00	0.00	0.00	3.77
5226	5283	2.352561	TCCTCCTAACCATCCAACCA	57.647	50.000	0.00	0.00	0.00	3.67
5227	5284	1.913419	TCCTCCTAACCATCCAACCAC	59.087	52.381	0.00	0.00	0.00	4.16
5228	5285	1.633432	CCTCCTAACCATCCAACCACA	59.367	52.381	0.00	0.00	0.00	4.17
5229	5286	2.041081	CCTCCTAACCATCCAACCACAA	59.959	50.000	0.00	0.00	0.00	3.33
5230	5287	3.347216	CTCCTAACCATCCAACCACAAG	58.653	50.000	0.00	0.00	0.00	3.16
5231	5288	2.714250	TCCTAACCATCCAACCACAAGT	59.286	45.455	0.00	0.00	0.00	3.16
5232	5289	3.139397	TCCTAACCATCCAACCACAAGTT	59.861	43.478	0.00	0.00	40.16	2.66
5240	5297	3.615099	AACCACAAGTTGTTTCGCG	57.385	47.368	5.57	0.00	37.29	5.87
5241	5298	0.524604	AACCACAAGTTGTTTCGCGC	60.525	50.000	5.57	0.00	37.29	6.86
5242	5299	2.003443	CCACAAGTTGTTTCGCGCG	61.003	57.895	26.76	26.76	0.00	6.86
5243	5300	1.297304	CACAAGTTGTTTCGCGCGT	60.297	52.632	30.98	5.11	0.00	6.01
5244	5301	0.859788	CACAAGTTGTTTCGCGCGTT	60.860	50.000	30.98	12.06	0.00	4.84
5245	5302	0.179184	ACAAGTTGTTTCGCGCGTTT	60.179	45.000	30.98	10.70	0.00	3.60
5246	5303	0.911184	CAAGTTGTTTCGCGCGTTTT	59.089	45.000	30.98	11.39	0.00	2.43
5247	5304	1.319079	CAAGTTGTTTCGCGCGTTTTT	59.681	42.857	30.98	12.42	0.00	1.94
5248	5305	0.911184	AGTTGTTTCGCGCGTTTTTG	59.089	45.000	30.98	0.00	0.00	2.44
5249	5306	0.646547	GTTGTTTCGCGCGTTTTTGC	60.647	50.000	30.98	14.95	0.00	3.68
5250	5307	0.798771	TTGTTTCGCGCGTTTTTGCT	60.799	45.000	30.98	0.00	0.00	3.91
5251	5308	0.798771	TGTTTCGCGCGTTTTTGCTT	60.799	45.000	30.98	0.00	0.00	3.91
5252	5309	0.296349	GTTTCGCGCGTTTTTGCTTT	59.704	45.000	30.98	0.00	0.00	3.51
5253	5310	0.296056	TTTCGCGCGTTTTTGCTTTG	59.704	45.000	30.98	0.00	0.00	2.77
5254	5311	0.798771	TTCGCGCGTTTTTGCTTTGT	60.799	45.000	30.98	0.00	0.00	2.83
5255	5312	0.027716	TCGCGCGTTTTTGCTTTGTA	59.972	45.000	30.98	1.54	0.00	2.41
5256	5313	1.049251	CGCGCGTTTTTGCTTTGTAT	58.951	45.000	24.19	0.00	0.00	2.29
5257	5314	1.450161	CGCGCGTTTTTGCTTTGTATT	59.550	42.857	24.19	0.00	0.00	1.89
5258	5315	2.714340	CGCGCGTTTTTGCTTTGTATTG	60.714	45.455	24.19	0.00	0.00	1.90
5259	5316	2.217620	GCGCGTTTTTGCTTTGTATTGT	59.782	40.909	8.43	0.00	0.00	2.71
5260	5317	3.658088	GCGCGTTTTTGCTTTGTATTGTC	60.658	43.478	8.43	0.00	0.00	3.18
5261	5318	3.728718	CGCGTTTTTGCTTTGTATTGTCT	59.271	39.130	0.00	0.00	0.00	3.41
5262	5319	4.907010	CGCGTTTTTGCTTTGTATTGTCTA	59.093	37.500	0.00	0.00	0.00	2.59
5263	5320	5.567534	CGCGTTTTTGCTTTGTATTGTCTAT	59.432	36.000	0.00	0.00	0.00	1.98
5264	5321	6.739100	CGCGTTTTTGCTTTGTATTGTCTATA	59.261	34.615	0.00	0.00	0.00	1.31
5265	5322	7.428183	CGCGTTTTTGCTTTGTATTGTCTATAT	59.572	33.333	0.00	0.00	0.00	0.86
5266	5323	9.072294	GCGTTTTTGCTTTGTATTGTCTATATT	57.928	29.630	0.00	0.00	0.00	1.28
5288	5345	9.959749	ATATTTTGTAACACAGTTTCAATCGTT	57.040	25.926	3.41	0.00	0.00	3.85
5290	5347	9.959749	ATTTTGTAACACAGTTTCAATCGTTAT	57.040	25.926	3.41	0.00	0.00	1.89
5294	5351	9.478768	TGTAACACAGTTTCAATCGTTATAAGA	57.521	29.630	0.00	0.00	0.00	2.10
5317	5374	8.632906	AGATATTGCAAAAATATGGGAGAGAG	57.367	34.615	1.71	0.00	0.00	3.20
5318	5375	8.443176	AGATATTGCAAAAATATGGGAGAGAGA	58.557	33.333	1.71	0.00	0.00	3.10
5319	5376	9.071276	GATATTGCAAAAATATGGGAGAGAGAA	57.929	33.333	1.71	0.00	0.00	2.87
5320	5377	7.909485	ATTGCAAAAATATGGGAGAGAGAAT	57.091	32.000	1.71	0.00	0.00	2.40
5322	5379	9.597681	ATTGCAAAAATATGGGAGAGAGAATAT	57.402	29.630	1.71	0.00	0.00	1.28
5331	5388	9.796242	ATATGGGAGAGAGAATATAAACATCCT	57.204	33.333	0.00	0.00	0.00	3.24
5333	5390	9.796242	ATGGGAGAGAGAATATAAACATCCTAT	57.204	33.333	0.00	0.00	0.00	2.57
5351	5408	9.896645	ACATCCTATATATAGACCATTTGCTTG	57.103	33.333	19.51	6.35	32.05	4.01
5354	5411	9.100197	TCCTATATATAGACCATTTGCTTGACA	57.900	33.333	19.51	0.00	32.05	3.58
5355	5412	9.725019	CCTATATATAGACCATTTGCTTGACAA	57.275	33.333	19.51	0.00	32.28	3.18
5359	5416	8.757982	ATATAGACCATTTGCTTGACAATCTT	57.242	30.769	0.00	0.00	38.31	2.40
5360	5417	5.796424	AGACCATTTGCTTGACAATCTTT	57.204	34.783	0.00	0.00	38.31	2.52
5361	5418	6.165700	AGACCATTTGCTTGACAATCTTTT	57.834	33.333	0.00	0.00	38.31	2.27
5362	5419	6.585416	AGACCATTTGCTTGACAATCTTTTT	58.415	32.000	0.00	0.00	38.31	1.94
5363	5420	7.725251	AGACCATTTGCTTGACAATCTTTTTA	58.275	30.769	0.00	0.00	38.31	1.52
5364	5421	7.869429	AGACCATTTGCTTGACAATCTTTTTAG	59.131	33.333	0.00	0.00	38.31	1.85
5365	5422	7.725251	ACCATTTGCTTGACAATCTTTTTAGA	58.275	30.769	0.00	0.00	38.31	2.10
5366	5423	7.653311	ACCATTTGCTTGACAATCTTTTTAGAC	59.347	33.333	0.00	0.00	38.31	2.59
5367	5424	7.116805	CCATTTGCTTGACAATCTTTTTAGACC	59.883	37.037	0.00	0.00	38.31	3.85
5368	5425	6.707440	TTGCTTGACAATCTTTTTAGACCA	57.293	33.333	0.00	0.00	31.73	4.02
5369	5426	6.899393	TGCTTGACAATCTTTTTAGACCAT	57.101	33.333	0.00	0.00	0.00	3.55
5370	5427	7.288810	TGCTTGACAATCTTTTTAGACCATT	57.711	32.000	0.00	0.00	0.00	3.16
5371	5428	7.147312	TGCTTGACAATCTTTTTAGACCATTG	58.853	34.615	0.00	0.00	0.00	2.82
5372	5429	7.147976	GCTTGACAATCTTTTTAGACCATTGT	58.852	34.615	0.00	0.00	39.76	2.71
5391	5448	9.685276	ACCATTGTCTATATGAAATTTCAGACA	57.315	29.630	25.43	25.43	41.08	3.41
5393	5450	9.661187	CATTGTCTATATGAAATTTCAGACAGC	57.339	33.333	26.61	17.91	38.79	4.40
5394	5451	7.792374	TGTCTATATGAAATTTCAGACAGCC	57.208	36.000	25.43	13.77	41.08	4.85
5395	5452	7.337938	TGTCTATATGAAATTTCAGACAGCCA	58.662	34.615	25.43	15.80	41.08	4.75
5396	5453	7.280876	TGTCTATATGAAATTTCAGACAGCCAC	59.719	37.037	25.43	16.46	41.08	5.01
5397	5454	7.280876	GTCTATATGAAATTTCAGACAGCCACA	59.719	37.037	24.17	2.03	41.08	4.17
5398	5455	7.994911	TCTATATGAAATTTCAGACAGCCACAT	59.005	33.333	24.17	7.75	41.08	3.21
5399	5456	5.733620	ATGAAATTTCAGACAGCCACATT	57.266	34.783	24.17	2.21	41.08	2.71
5400	5457	5.534207	TGAAATTTCAGACAGCCACATTT	57.466	34.783	16.91	0.00	32.50	2.32

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
204	208	6.038271	GGACGAAATATACAAGATGCCACTTT	59.962	38.462	0.00	0.00	0.00	2.66
233	237	2.669781	ACCATAATGGGTGCATGAAGG	58.330	47.619	0.00	0.00	43.37	3.46
457	461	1.267832	CGCGCACGCCAACTAAATTAT	60.268	47.619	8.75	0.00	37.98	1.28
558	562	2.276743	CGGTCTCGAGAAGTCGCG	60.277	66.667	18.55	0.00	46.39	5.87
559	563	1.512310	CACGGTCTCGAGAAGTCGC	60.512	63.158	18.55	3.85	46.39	5.19
561	565	0.241481	AAGCACGGTCTCGAGAAGTC	59.759	55.000	18.55	13.29	40.11	3.01
562	566	0.241481	GAAGCACGGTCTCGAGAAGT	59.759	55.000	18.55	17.21	40.11	3.01
563	567	0.523966	AGAAGCACGGTCTCGAGAAG	59.476	55.000	18.55	16.53	40.11	2.85
564	568	0.241213	CAGAAGCACGGTCTCGAGAA	59.759	55.000	18.55	0.00	40.11	2.87
565	569	0.605589	TCAGAAGCACGGTCTCGAGA	60.606	55.000	12.08	12.08	40.11	4.04
566	570	0.241213	TTCAGAAGCACGGTCTCGAG	59.759	55.000	5.93	5.93	40.11	4.04
567	571	0.671796	TTTCAGAAGCACGGTCTCGA	59.328	50.000	0.00	0.00	40.11	4.04
568	572	1.497991	TTTTCAGAAGCACGGTCTCG	58.502	50.000	0.00	0.00	43.02	4.04
569	573	3.748568	AGATTTTTCAGAAGCACGGTCTC	59.251	43.478	0.00	0.00	0.00	3.36
570	574	3.744660	AGATTTTTCAGAAGCACGGTCT	58.255	40.909	0.00	0.00	0.00	3.85
571	575	5.803020	ATAGATTTTTCAGAAGCACGGTC	57.197	39.130	0.00	0.00	0.00	4.79
572	576	6.483640	GGATATAGATTTTTCAGAAGCACGGT	59.516	38.462	0.00	0.00	0.00	4.83
573	577	6.073003	GGGATATAGATTTTTCAGAAGCACGG	60.073	42.308	0.00	0.00	0.00	4.94
574	578	6.483307	TGGGATATAGATTTTTCAGAAGCACG	59.517	38.462	0.00	0.00	0.00	5.34
575	579	7.521261	GCTGGGATATAGATTTTTCAGAAGCAC	60.521	40.741	0.00	0.00	0.00	4.40
576	580	6.488006	GCTGGGATATAGATTTTTCAGAAGCA	59.512	38.462	0.00	0.00	0.00	3.91
577	581	6.714356	AGCTGGGATATAGATTTTTCAGAAGC	59.286	38.462	0.00	0.00	0.00	3.86
578	582	7.117523	CGAGCTGGGATATAGATTTTTCAGAAG	59.882	40.741	0.00	0.00	0.00	2.85
579	583	6.931281	CGAGCTGGGATATAGATTTTTCAGAA	59.069	38.462	0.00	0.00	0.00	3.02
580	584	6.042093	ACGAGCTGGGATATAGATTTTTCAGA	59.958	38.462	0.00	0.00	0.00	3.27
581	585	6.226787	ACGAGCTGGGATATAGATTTTTCAG	58.773	40.000	0.00	0.00	0.00	3.02
582	586	6.174720	ACGAGCTGGGATATAGATTTTTCA	57.825	37.500	0.00	0.00	0.00	2.69
583	587	7.497925	AAACGAGCTGGGATATAGATTTTTC	57.502	36.000	0.00	0.00	0.00	2.29
584	588	7.556275	TGAAAACGAGCTGGGATATAGATTTTT	59.444	33.333	0.00	0.00	0.00	1.94
585	589	7.054124	TGAAAACGAGCTGGGATATAGATTTT	58.946	34.615	0.00	0.00	0.00	1.82
586	590	6.591935	TGAAAACGAGCTGGGATATAGATTT	58.408	36.000	0.00	0.00	0.00	2.17
587	591	6.174720	TGAAAACGAGCTGGGATATAGATT	57.825	37.500	0.00	0.00	0.00	2.40
588	592	5.808366	TGAAAACGAGCTGGGATATAGAT	57.192	39.130	0.00	0.00	0.00	1.98
589	593	5.564848	CGATGAAAACGAGCTGGGATATAGA	60.565	44.000	0.00	0.00	31.90	1.98
590	594	4.623167	CGATGAAAACGAGCTGGGATATAG	59.377	45.833	0.00	0.00	31.90	1.31
591	595	4.279922	TCGATGAAAACGAGCTGGGATATA	59.720	41.667	0.00	0.00	35.75	0.86
592	596	3.069586	TCGATGAAAACGAGCTGGGATAT	59.930	43.478	0.00	0.00	35.75	1.63
593	597	2.429250	TCGATGAAAACGAGCTGGGATA	59.571	45.455	0.00	0.00	35.75	2.59
594	598	1.207089	TCGATGAAAACGAGCTGGGAT	59.793	47.619	0.00	0.00	35.75	3.85
595	599	0.606096	TCGATGAAAACGAGCTGGGA	59.394	50.000	0.00	0.00	35.75	4.37
596	600	3.137484	TCGATGAAAACGAGCTGGG	57.863	52.632	0.00	0.00	35.75	4.45
602	606	1.674817	GGGAAGGCTCGATGAAAACGA	60.675	52.381	0.00	0.00	39.40	3.85
603	607	0.727398	GGGAAGGCTCGATGAAAACG	59.273	55.000	0.00	0.00	0.00	3.60
604	608	1.095600	GGGGAAGGCTCGATGAAAAC	58.904	55.000	0.00	0.00	0.00	2.43
605	609	0.034477	GGGGGAAGGCTCGATGAAAA	60.034	55.000	0.00	0.00	0.00	2.29
606	610	1.607612	GGGGGAAGGCTCGATGAAA	59.392	57.895	0.00	0.00	0.00	2.69
607	611	3.320359	GGGGGAAGGCTCGATGAA	58.680	61.111	0.00	0.00	0.00	2.57
621	625	0.108019	GGCTATACTCCAAACGGGGG	59.892	60.000	0.00	0.00	45.74	5.40
622	626	0.834612	TGGCTATACTCCAAACGGGG	59.165	55.000	0.00	0.00	37.22	5.73
623	627	2.093128	ACTTGGCTATACTCCAAACGGG	60.093	50.000	3.96	0.00	42.45	5.28
624	628	2.936498	CACTTGGCTATACTCCAAACGG	59.064	50.000	3.96	0.00	42.45	4.44
625	629	2.936498	CCACTTGGCTATACTCCAAACG	59.064	50.000	3.96	0.00	42.45	3.60
626	630	3.951663	ACCACTTGGCTATACTCCAAAC	58.048	45.455	0.00	0.00	42.45	2.93
627	631	5.338871	CCTTACCACTTGGCTATACTCCAAA	60.339	44.000	0.00	0.00	42.45	3.28
628	632	4.163458	CCTTACCACTTGGCTATACTCCAA	59.837	45.833	0.00	0.00	40.98	3.53
629	633	3.709653	CCTTACCACTTGGCTATACTCCA	59.290	47.826	0.00	0.00	39.32	3.86
630	634	3.494573	GCCTTACCACTTGGCTATACTCC	60.495	52.174	0.00	0.00	43.05	3.85
631	635	3.134081	TGCCTTACCACTTGGCTATACTC	59.866	47.826	0.00	0.00	46.23	2.59
632	636	3.112263	TGCCTTACCACTTGGCTATACT	58.888	45.455	0.00	0.00	46.23	2.12
633	637	3.553828	TGCCTTACCACTTGGCTATAC	57.446	47.619	0.00	0.00	46.23	1.47
634	638	3.244078	CGATGCCTTACCACTTGGCTATA	60.244	47.826	0.00	0.00	46.23	1.31
635	639	2.485479	CGATGCCTTACCACTTGGCTAT	60.485	50.000	0.00	0.00	46.23	2.97
636	640	1.134521	CGATGCCTTACCACTTGGCTA	60.135	52.381	0.00	0.00	46.23	3.93
637	641	0.392998	CGATGCCTTACCACTTGGCT	60.393	55.000	0.00	0.00	46.23	4.75
638	642	1.376609	CCGATGCCTTACCACTTGGC	61.377	60.000	0.00	0.00	46.26	4.52
639	643	0.035439	ACCGATGCCTTACCACTTGG	60.035	55.000	0.00	0.00	42.17	3.61
640	644	1.821216	AACCGATGCCTTACCACTTG	58.179	50.000	0.00	0.00	0.00	3.16
641	645	2.579410	AAACCGATGCCTTACCACTT	57.421	45.000	0.00	0.00	0.00	3.16
642	646	2.556622	CAAAAACCGATGCCTTACCACT	59.443	45.455	0.00	0.00	0.00	4.00
643	647	2.352323	CCAAAAACCGATGCCTTACCAC	60.352	50.000	0.00	0.00	0.00	4.16
644	648	1.889829	CCAAAAACCGATGCCTTACCA	59.110	47.619	0.00	0.00	0.00	3.25
645	649	1.203758	CCCAAAAACCGATGCCTTACC	59.796	52.381	0.00	0.00	0.00	2.85
646	650	1.403647	GCCCAAAAACCGATGCCTTAC	60.404	52.381	0.00	0.00	0.00	2.34
647	651	0.892063	GCCCAAAAACCGATGCCTTA	59.108	50.000	0.00	0.00	0.00	2.69
648	652	1.671166	GCCCAAAAACCGATGCCTT	59.329	52.632	0.00	0.00	0.00	4.35
649	653	2.282783	GGCCCAAAAACCGATGCCT	61.283	57.895	0.00	0.00	35.99	4.75
650	654	2.225791	GAGGCCCAAAAACCGATGCC	62.226	60.000	0.00	0.00	39.17	4.40
651	655	1.215382	GAGGCCCAAAAACCGATGC	59.785	57.895	0.00	0.00	0.00	3.91
652	656	1.506262	CGAGGCCCAAAAACCGATG	59.494	57.895	0.00	0.00	0.00	3.84
653	657	2.340328	GCGAGGCCCAAAAACCGAT	61.340	57.895	0.00	0.00	0.00	4.18
654	658	2.981350	GCGAGGCCCAAAAACCGA	60.981	61.111	0.00	0.00	0.00	4.69
655	659	4.398598	CGCGAGGCCCAAAAACCG	62.399	66.667	0.00	0.00	0.00	4.44
656	660	3.292159	ACGCGAGGCCCAAAAACC	61.292	61.111	15.93	0.00	0.00	3.27
657	661	1.508808	TACACGCGAGGCCCAAAAAC	61.509	55.000	15.93	0.00	0.00	2.43
658	662	1.227883	TACACGCGAGGCCCAAAAA	60.228	52.632	15.93	0.00	0.00	1.94
659	663	1.669760	CTACACGCGAGGCCCAAAA	60.670	57.895	15.93	0.00	0.00	2.44
660	664	2.047655	CTACACGCGAGGCCCAAA	60.048	61.111	15.93	0.00	0.00	3.28
661	665	4.752879	GCTACACGCGAGGCCCAA	62.753	66.667	15.93	0.00	0.00	4.12
664	668	4.874977	GAGGCTACACGCGAGGCC	62.875	72.222	15.93	19.54	44.38	5.19
665	669	4.874977	GGAGGCTACACGCGAGGC	62.875	72.222	15.93	13.11	40.44	4.70
683	687	2.023223	CTTGTGGCAATTGCGTGGC	61.023	57.895	23.48	10.64	43.26	5.01
685	689	0.940519	CACCTTGTGGCAATTGCGTG	60.941	55.000	23.48	19.28	43.26	5.34
691	695	1.885157	CGATGCACCTTGTGGCAAT	59.115	52.632	0.00	0.00	44.20	3.56
692	696	2.918345	GCGATGCACCTTGTGGCAA	61.918	57.895	0.00	0.00	44.20	4.52
710	714	2.947938	ATTTCCGCATCCAGGCCGAG	62.948	60.000	0.00	0.00	0.00	4.63
715	719	1.160329	GGTCGATTTCCGCATCCAGG	61.160	60.000	0.00	0.00	38.37	4.45
717	721	1.520564	CGGTCGATTTCCGCATCCA	60.521	57.895	0.00	0.00	41.48	3.41
718	722	0.600255	ATCGGTCGATTTCCGCATCC	60.600	55.000	8.01	0.00	46.49	3.51
722	726	0.507358	GCTAATCGGTCGATTTCCGC	59.493	55.000	21.16	17.00	46.49	5.54
724	728	2.135933	CTGGCTAATCGGTCGATTTCC	58.864	52.381	21.16	20.51	41.55	3.13
729	733	0.959553	GGATCTGGCTAATCGGTCGA	59.040	55.000	0.00	0.00	0.00	4.20
735	741	2.549778	GCACCTCTGGATCTGGCTAATC	60.550	54.545	0.00	0.00	0.00	1.75
759	765	1.377725	CTGGTCCGCATGAGCCTTT	60.378	57.895	0.00	0.00	40.88	3.11
817	824	4.506271	CCATCCCATCCATGAACTCTTAGG	60.506	50.000	0.00	0.00	0.00	2.69
818	825	4.103785	ACCATCCCATCCATGAACTCTTAG	59.896	45.833	0.00	0.00	0.00	2.18
821	828	2.174210	CACCATCCCATCCATGAACTCT	59.826	50.000	0.00	0.00	0.00	3.24
825	832	1.215173	GGACACCATCCCATCCATGAA	59.785	52.381	0.00	0.00	42.46	2.57
826	833	0.846015	GGACACCATCCCATCCATGA	59.154	55.000	0.00	0.00	42.46	3.07
827	834	3.426903	GGACACCATCCCATCCATG	57.573	57.895	0.00	0.00	42.46	3.66
858	865	1.063174	GAGACACCAAATGCTCGATGC	59.937	52.381	0.00	0.00	43.25	3.91
859	866	2.625737	AGAGACACCAAATGCTCGATG	58.374	47.619	0.00	0.00	36.88	3.84
860	867	3.340814	AAGAGACACCAAATGCTCGAT	57.659	42.857	0.00	0.00	36.88	3.59
861	868	2.839486	AAGAGACACCAAATGCTCGA	57.161	45.000	0.00	0.00	36.88	4.04
862	869	5.356882	TTTTAAGAGACACCAAATGCTCG	57.643	39.130	0.00	0.00	36.88	5.03
985	994	1.080569	CAACGGGAATTGGCAGTGC	60.081	57.895	6.55	6.55	0.00	4.40
1026	1035	1.130678	GGAGGGGATAAGGGGAGCAG	61.131	65.000	0.00	0.00	0.00	4.24
1148	1157	2.580815	CAGGAGTCGCATGCCTCA	59.419	61.111	20.96	0.89	0.00	3.86
1544	1573	4.214119	CAGAAACATCAGTTACACACCCAG	59.786	45.833	0.00	0.00	36.84	4.45
1622	1651	3.947834	CGAATCCAATTCCCTTAGTGCTT	59.052	43.478	0.00	0.00	35.89	3.91
1628	1657	3.278574	CTGCACGAATCCAATTCCCTTA	58.721	45.455	0.00	0.00	35.89	2.69
1705	1735	7.951287	TCATAAAATTCACATGTTTTGCATCG	58.049	30.769	0.00	0.00	35.19	3.84
1732	1765	9.309516	CTGCAGTTCTAAATTTATGCATTGATT	57.690	29.630	19.33	2.80	42.24	2.57
1748	1781	6.639632	AATTTTCTTTGAGCTGCAGTTCTA	57.360	33.333	27.78	19.67	0.00	2.10
1820	1853	6.595326	TGCAGGTGTATAGAAGAACATTCAAG	59.405	38.462	0.00	0.00	0.00	3.02
1834	1867	6.040504	CAGGTAACATAGACTGCAGGTGTATA	59.959	42.308	19.93	0.00	33.41	1.47
1919	1952	6.236558	AGCCCTTCATCTTAAGTTACCTAC	57.763	41.667	1.63	0.00	0.00	3.18
1920	1953	7.842743	TCTTAGCCCTTCATCTTAAGTTACCTA	59.157	37.037	1.63	0.00	0.00	3.08
2101	2142	7.630082	TGGTTAAGCTTATCCAGTTAGTCAAT	58.370	34.615	25.85	0.00	30.94	2.57
2240	2282	3.116959	TCGCCCTTTCTCCCCTATTTTA	58.883	45.455	0.00	0.00	0.00	1.52
2282	2324	2.613595	TGTGAATGCAAGTATCATCGGC	59.386	45.455	0.00	0.00	0.00	5.54
2283	2325	6.732531	ATATGTGAATGCAAGTATCATCGG	57.267	37.500	0.00	0.00	0.00	4.18
2323	2365	1.315257	ACAATTGGAGGTGCATCGGC	61.315	55.000	10.83	0.00	41.68	5.54
2370	2412	5.230746	TCCAGTAACCCTTTATACCCTCT	57.769	43.478	0.00	0.00	0.00	3.69
2420	2462	8.658609	CAAAATTACAATTTGCAAGATGGGTAG	58.341	33.333	15.37	0.00	38.53	3.18
2440	2482	1.203052	CCATGCACGAGCCTCAAAATT	59.797	47.619	1.39	0.00	41.13	1.82
2535	2577	2.693797	ATGAGAAAAGTTGCACTGCG	57.306	45.000	0.00	0.00	0.00	5.18
2674	2717	6.472887	TCTCCGGAATACTTTCTGAAAACAT	58.527	36.000	5.23	0.00	40.14	2.71
2710	2753	5.246307	GCAAGTCTCCCAAATACAGTAAGT	58.754	41.667	0.00	0.00	0.00	2.24
2814	2857	8.420222	ACAACCAATTTTGACATATGAAACTGA	58.580	29.630	10.38	0.00	0.00	3.41
2815	2858	8.489559	CACAACCAATTTTGACATATGAAACTG	58.510	33.333	10.38	0.00	0.00	3.16
2825	2868	5.152623	TGGAAACACAACCAATTTTGACA	57.847	34.783	0.00	0.00	33.40	3.58
2847	2890	9.525826	AAAGTTCAGACCAGAATAAGAATGAAT	57.474	29.630	0.00	0.00	0.00	2.57
2977	3020	3.778075	TCATCTATTTTGGAACGGAGGGA	59.222	43.478	0.00	0.00	0.00	4.20
2978	3021	3.877508	GTCATCTATTTTGGAACGGAGGG	59.122	47.826	0.00	0.00	0.00	4.30
2979	3022	4.770795	AGTCATCTATTTTGGAACGGAGG	58.229	43.478	0.00	0.00	0.00	4.30
2980	3023	5.419542	TGAGTCATCTATTTTGGAACGGAG	58.580	41.667	0.00	0.00	0.00	4.63
2981	3024	5.414789	TGAGTCATCTATTTTGGAACGGA	57.585	39.130	0.00	0.00	0.00	4.69
2982	3025	5.643777	AGTTGAGTCATCTATTTTGGAACGG	59.356	40.000	1.70	0.00	0.00	4.44
2983	3026	6.727824	AGTTGAGTCATCTATTTTGGAACG	57.272	37.500	1.70	0.00	0.00	3.95
3009	3052	9.716531	GACCCAACTTTGTACTAAAGTTAGTAT	57.283	33.333	23.56	15.20	45.57	2.12
3010	3053	8.703743	TGACCCAACTTTGTACTAAAGTTAGTA	58.296	33.333	23.56	6.81	45.57	1.82
3011	3054	7.567458	TGACCCAACTTTGTACTAAAGTTAGT	58.433	34.615	23.56	22.58	45.57	2.24
3012	3055	8.617290	ATGACCCAACTTTGTACTAAAGTTAG	57.383	34.615	23.56	20.79	45.57	2.34
3013	3056	8.434392	AGATGACCCAACTTTGTACTAAAGTTA	58.566	33.333	23.56	14.79	45.57	2.24
3015	3058	6.838382	AGATGACCCAACTTTGTACTAAAGT	58.162	36.000	14.04	14.04	41.82	2.66
3016	3059	9.449719	AATAGATGACCCAACTTTGTACTAAAG	57.550	33.333	13.08	13.08	0.00	1.85
3017	3060	9.802039	AAATAGATGACCCAACTTTGTACTAAA	57.198	29.630	0.00	0.00	0.00	1.85
3018	3061	9.802039	AAAATAGATGACCCAACTTTGTACTAA	57.198	29.630	0.00	0.00	0.00	2.24
3019	3062	9.226606	CAAAATAGATGACCCAACTTTGTACTA	57.773	33.333	0.00	0.00	0.00	1.82
3020	3063	7.176690	CCAAAATAGATGACCCAACTTTGTACT	59.823	37.037	0.00	0.00	0.00	2.73
3021	3064	7.175990	TCCAAAATAGATGACCCAACTTTGTAC	59.824	37.037	0.00	0.00	0.00	2.90
3022	3065	7.235079	TCCAAAATAGATGACCCAACTTTGTA	58.765	34.615	0.00	0.00	0.00	2.41
3023	3066	6.074648	TCCAAAATAGATGACCCAACTTTGT	58.925	36.000	0.00	0.00	0.00	2.83
3024	3067	6.588719	TCCAAAATAGATGACCCAACTTTG	57.411	37.500	0.00	0.00	0.00	2.77
3025	3068	6.294508	CGTTCCAAAATAGATGACCCAACTTT	60.295	38.462	0.00	0.00	0.00	2.66
3026	3069	5.183140	CGTTCCAAAATAGATGACCCAACTT	59.817	40.000	0.00	0.00	0.00	2.66
3027	3070	4.700213	CGTTCCAAAATAGATGACCCAACT	59.300	41.667	0.00	0.00	0.00	3.16
3028	3071	4.142469	CCGTTCCAAAATAGATGACCCAAC	60.142	45.833	0.00	0.00	0.00	3.77
3029	3072	4.013728	CCGTTCCAAAATAGATGACCCAA	58.986	43.478	0.00	0.00	0.00	4.12
3030	3073	3.264706	TCCGTTCCAAAATAGATGACCCA	59.735	43.478	0.00	0.00	0.00	4.51
3031	3074	3.877508	CTCCGTTCCAAAATAGATGACCC	59.122	47.826	0.00	0.00	0.00	4.46
3032	3075	3.877508	CCTCCGTTCCAAAATAGATGACC	59.122	47.826	0.00	0.00	0.00	4.02
3033	3076	3.877508	CCCTCCGTTCCAAAATAGATGAC	59.122	47.826	0.00	0.00	0.00	3.06
3034	3077	3.778075	TCCCTCCGTTCCAAAATAGATGA	59.222	43.478	0.00	0.00	0.00	2.92
3035	3078	4.130118	CTCCCTCCGTTCCAAAATAGATG	58.870	47.826	0.00	0.00	0.00	2.90
3036	3079	3.780850	ACTCCCTCCGTTCCAAAATAGAT	59.219	43.478	0.00	0.00	0.00	1.98
3037	3080	3.178865	ACTCCCTCCGTTCCAAAATAGA	58.821	45.455	0.00	0.00	0.00	1.98
3038	3081	3.629142	ACTCCCTCCGTTCCAAAATAG	57.371	47.619	0.00	0.00	0.00	1.73
3039	3082	3.839490	TGTACTCCCTCCGTTCCAAAATA	59.161	43.478	0.00	0.00	0.00	1.40
3040	3083	2.640826	TGTACTCCCTCCGTTCCAAAAT	59.359	45.455	0.00	0.00	0.00	1.82
3041	3084	2.048601	TGTACTCCCTCCGTTCCAAAA	58.951	47.619	0.00	0.00	0.00	2.44
3042	3085	1.719529	TGTACTCCCTCCGTTCCAAA	58.280	50.000	0.00	0.00	0.00	3.28
3043	3086	1.719529	TTGTACTCCCTCCGTTCCAA	58.280	50.000	0.00	0.00	0.00	3.53
3044	3087	1.345415	GTTTGTACTCCCTCCGTTCCA	59.655	52.381	0.00	0.00	0.00	3.53
3045	3088	1.345415	TGTTTGTACTCCCTCCGTTCC	59.655	52.381	0.00	0.00	0.00	3.62
3046	3089	2.825861	TGTTTGTACTCCCTCCGTTC	57.174	50.000	0.00	0.00	0.00	3.95
3047	3090	4.895668	TTATGTTTGTACTCCCTCCGTT	57.104	40.909	0.00	0.00	0.00	4.44
3048	3091	4.895668	TTTATGTTTGTACTCCCTCCGT	57.104	40.909	0.00	0.00	0.00	4.69
3049	3092	6.598064	AGAAATTTATGTTTGTACTCCCTCCG	59.402	38.462	0.00	0.00	0.00	4.63
3050	3093	7.393515	ACAGAAATTTATGTTTGTACTCCCTCC	59.606	37.037	12.58	0.00	0.00	4.30
3051	3094	8.336801	ACAGAAATTTATGTTTGTACTCCCTC	57.663	34.615	12.58	0.00	0.00	4.30
3052	3095	9.975218	ATACAGAAATTTATGTTTGTACTCCCT	57.025	29.630	22.36	0.00	34.09	4.20
3066	3109	7.441890	TGCCAGTTCGAAATACAGAAATTTA	57.558	32.000	0.00	0.00	0.00	1.40
3078	3121	4.458642	TCATCATGAAATGCCAGTTCGAAA	59.541	37.500	0.00	0.00	46.21	3.46
3102	3146	7.202016	TGTTCAGAGCAACCTACAAAATTAG	57.798	36.000	0.00	0.00	0.00	1.73
3143	3187	1.981495	CCCCCATAGAAGGAAGCTAGG	59.019	57.143	0.00	0.00	0.00	3.02
3330	3375	9.695884	GATTTCTTCATTCTTCGATACAGAAAC	57.304	33.333	2.33	0.00	33.94	2.78
3429	3474	2.609459	GTCCAACGGATAGCACATCAAG	59.391	50.000	1.34	0.00	32.73	3.02
3489	3534	7.340122	TGGAATGGCATCGAAAATTGTATTA	57.660	32.000	0.00	0.00	0.00	0.98
3520	3565	2.295253	AGGGTAGCGAAATTCACTCG	57.705	50.000	0.00	0.00	39.33	4.18
3531	3576	1.568612	CCGCATATGCAAGGGTAGCG	61.569	60.000	26.52	9.66	42.21	4.26
3579	3624	2.760650	CACACTGAGGTGGCTATGTAGA	59.239	50.000	1.29	0.00	46.85	2.59
3623	3668	6.708054	GCTGCTAATGAGTACATAGAATGGTT	59.292	38.462	0.00	0.00	35.50	3.67
3633	3678	5.604758	AGATCAAGCTGCTAATGAGTACA	57.395	39.130	0.90	0.00	0.00	2.90
4021	4071	1.069227	CGAGCCTTAAGGTTGTGCAAC	60.069	52.381	22.55	6.52	40.45	4.17
4275	4328	9.273016	CGAATAAATATCAGGTAAGGTGAATGT	57.727	33.333	0.00	0.00	0.00	2.71
4396	4449	1.475682	GGGTGTACCTGTTAGAGGACG	59.524	57.143	1.26	0.00	46.33	4.79
4421	4477	6.055588	CCCTGTAGAACAAGGGTGTATTATG	58.944	44.000	0.00	0.00	36.80	1.90
4422	4478	5.729718	ACCCTGTAGAACAAGGGTGTATTAT	59.270	40.000	12.56	0.00	43.40	1.28
4430	4486	2.951229	AACACCCTGTAGAACAAGGG	57.049	50.000	6.19	6.19	40.28	3.95
4491	4547	1.924524	TCGGCGAATCTAAAGCTTTCG	59.075	47.619	16.57	13.95	43.72	3.46
4531	4587	1.484240	CAAAAGAGGTGGTGCCCAAAA	59.516	47.619	0.00	0.00	38.26	2.44
4549	4605	7.120579	TCAAGCTGAAAGAGAAACAAACTACAA	59.879	33.333	0.00	0.00	34.07	2.41
4554	4610	4.737279	GCTCAAGCTGAAAGAGAAACAAAC	59.263	41.667	9.21	0.00	38.21	2.93
4589	4645	3.104766	CATCGCCTGATGGTGCAC	58.895	61.111	8.80	8.80	46.76	4.57
4721	4777	6.892658	ATAGCAGTACACAATTTGTCCAAA	57.107	33.333	0.00	0.00	39.91	3.28
4815	4871	8.745590	CCATTTCATAATATGATCTGGAATGCA	58.254	33.333	19.05	0.00	40.73	3.96
4847	4903	4.202599	TGGCATCCAATTCCAGCAGTATAT	60.203	41.667	0.00	0.00	0.00	0.86
4857	4914	2.165030	CAGTCAAGTGGCATCCAATTCC	59.835	50.000	0.00	0.00	39.94	3.01
4872	4929	7.809238	AGATTTATTCCAGATCATCCAGTCAA	58.191	34.615	0.00	0.00	0.00	3.18
4873	4930	7.291885	AGAGATTTATTCCAGATCATCCAGTCA	59.708	37.037	0.00	0.00	0.00	3.41
4874	4931	7.678837	AGAGATTTATTCCAGATCATCCAGTC	58.321	38.462	0.00	0.00	0.00	3.51
4875	4932	7.291885	TGAGAGATTTATTCCAGATCATCCAGT	59.708	37.037	0.00	0.00	0.00	4.00
4876	4933	7.677892	TGAGAGATTTATTCCAGATCATCCAG	58.322	38.462	0.00	0.00	0.00	3.86
4877	4934	7.256583	CCTGAGAGATTTATTCCAGATCATCCA	60.257	40.741	0.00	0.00	0.00	3.41
4894	4951	0.398381	GGGACTGAGGCCTGAGAGAT	60.398	60.000	27.32	2.82	0.00	2.75
4901	4958	2.608988	CAGGTGGGACTGAGGCCT	60.609	66.667	3.86	3.86	40.97	5.19
4909	4966	1.741770	GCACATCGTCAGGTGGGAC	60.742	63.158	0.00	0.00	35.58	4.46
4912	4969	3.490759	GCGCACATCGTCAGGTGG	61.491	66.667	0.30	0.00	41.07	4.61
4922	4979	0.880278	ACAAGTGTTCGAGCGCACAT	60.880	50.000	15.37	2.59	38.02	3.21
4932	4989	1.160137	CTAGCCTGCCACAAGTGTTC	58.840	55.000	0.00	0.00	0.00	3.18
4939	4996	2.959484	GCCTCACTAGCCTGCCACA	61.959	63.158	0.00	0.00	0.00	4.17
4947	5004	1.448013	GAACCACGGCCTCACTAGC	60.448	63.158	0.00	0.00	0.00	3.42
4948	5005	1.218316	GGAACCACGGCCTCACTAG	59.782	63.158	0.00	0.00	0.00	2.57
4949	5006	0.907704	ATGGAACCACGGCCTCACTA	60.908	55.000	0.00	0.00	0.00	2.74
4950	5007	2.224159	ATGGAACCACGGCCTCACT	61.224	57.895	0.00	0.00	0.00	3.41
4951	5008	2.040544	CATGGAACCACGGCCTCAC	61.041	63.158	0.00	0.00	0.00	3.51
4952	5009	2.350895	CATGGAACCACGGCCTCA	59.649	61.111	0.00	0.00	0.00	3.86
4953	5010	2.270874	ATCCATGGAACCACGGCCTC	62.271	60.000	20.67	0.00	0.00	4.70
4954	5011	2.270874	GATCCATGGAACCACGGCCT	62.271	60.000	20.67	0.00	0.00	5.19
4955	5012	1.823899	GATCCATGGAACCACGGCC	60.824	63.158	20.67	0.00	0.00	6.13
4956	5013	1.097547	CAGATCCATGGAACCACGGC	61.098	60.000	20.67	2.58	0.00	5.68
4957	5014	0.464373	CCAGATCCATGGAACCACGG	60.464	60.000	20.67	12.95	43.57	4.94
4958	5015	0.541392	TCCAGATCCATGGAACCACG	59.459	55.000	20.67	7.58	46.45	4.94
4968	5025	1.204704	CTAACACGCTGTCCAGATCCA	59.795	52.381	0.00	0.00	0.00	3.41
5012	5069	6.469410	TGTCTTTATCTCATAAACAACCCGT	58.531	36.000	0.00	0.00	31.84	5.28
5030	5087	6.016276	AGCGTTTTTCACCTCATATTGTCTTT	60.016	34.615	0.00	0.00	0.00	2.52
5031	5088	5.473504	AGCGTTTTTCACCTCATATTGTCTT	59.526	36.000	0.00	0.00	0.00	3.01
5038	5095	4.637276	TGAAGAGCGTTTTTCACCTCATA	58.363	39.130	0.95	0.00	0.00	2.15
5072	5129	9.113838	GACAACTGATCAAATGTATTGTCCTAT	57.886	33.333	11.80	0.00	38.87	2.57
5078	5135	7.596494	ACAAGGACAACTGATCAAATGTATTG	58.404	34.615	21.64	21.64	32.81	1.90
5082	5139	4.520492	GGACAAGGACAACTGATCAAATGT	59.480	41.667	11.68	11.68	0.00	2.71
5083	5140	4.082571	GGGACAAGGACAACTGATCAAATG	60.083	45.833	0.00	1.15	0.00	2.32
5084	5141	4.082125	GGGACAAGGACAACTGATCAAAT	58.918	43.478	0.00	0.00	0.00	2.32
5085	5142	3.138283	AGGGACAAGGACAACTGATCAAA	59.862	43.478	0.00	0.00	0.00	2.69
5086	5143	2.711009	AGGGACAAGGACAACTGATCAA	59.289	45.455	0.00	0.00	0.00	2.57
5087	5144	2.338809	AGGGACAAGGACAACTGATCA	58.661	47.619	0.00	0.00	0.00	2.92
5088	5145	4.762289	ATAGGGACAAGGACAACTGATC	57.238	45.455	0.00	0.00	0.00	2.92
5089	5146	4.409247	GGTATAGGGACAAGGACAACTGAT	59.591	45.833	0.00	0.00	0.00	2.90
5090	5147	3.773119	GGTATAGGGACAAGGACAACTGA	59.227	47.826	0.00	0.00	0.00	3.41
5091	5148	3.775316	AGGTATAGGGACAAGGACAACTG	59.225	47.826	0.00	0.00	0.00	3.16
5092	5149	4.076175	AGGTATAGGGACAAGGACAACT	57.924	45.455	0.00	0.00	0.00	3.16
5093	5150	5.601313	TCATAGGTATAGGGACAAGGACAAC	59.399	44.000	0.00	0.00	0.00	3.32
5094	5151	5.784023	TCATAGGTATAGGGACAAGGACAA	58.216	41.667	0.00	0.00	0.00	3.18
5095	5152	5.394738	CTCATAGGTATAGGGACAAGGACA	58.605	45.833	0.00	0.00	0.00	4.02
5096	5153	4.221041	GCTCATAGGTATAGGGACAAGGAC	59.779	50.000	0.00	0.00	0.00	3.85
5097	5154	4.140782	TGCTCATAGGTATAGGGACAAGGA	60.141	45.833	0.00	0.00	0.00	3.36
5098	5155	4.021016	GTGCTCATAGGTATAGGGACAAGG	60.021	50.000	0.00	0.00	0.00	3.61
5099	5156	4.021016	GGTGCTCATAGGTATAGGGACAAG	60.021	50.000	0.00	0.00	0.00	3.16
5100	5157	3.901844	GGTGCTCATAGGTATAGGGACAA	59.098	47.826	0.00	0.00	0.00	3.18
5101	5158	3.142217	AGGTGCTCATAGGTATAGGGACA	59.858	47.826	0.00	0.00	0.00	4.02
5102	5159	3.780626	AGGTGCTCATAGGTATAGGGAC	58.219	50.000	0.00	0.00	0.00	4.46
5103	5160	4.487282	AAGGTGCTCATAGGTATAGGGA	57.513	45.455	0.00	0.00	0.00	4.20
5104	5161	5.580998	TCTAAGGTGCTCATAGGTATAGGG	58.419	45.833	0.00	0.00	0.00	3.53
5105	5162	6.486056	TCTCTAAGGTGCTCATAGGTATAGG	58.514	44.000	0.00	0.00	0.00	2.57
5106	5163	7.335924	GTCTCTCTAAGGTGCTCATAGGTATAG	59.664	44.444	0.00	0.00	0.00	1.31
5107	5164	7.017750	AGTCTCTCTAAGGTGCTCATAGGTATA	59.982	40.741	0.00	0.00	0.00	1.47
5108	5165	6.007703	GTCTCTCTAAGGTGCTCATAGGTAT	58.992	44.000	0.00	0.00	0.00	2.73
5109	5166	5.132985	AGTCTCTCTAAGGTGCTCATAGGTA	59.867	44.000	0.00	0.00	0.00	3.08
5110	5167	4.079443	AGTCTCTCTAAGGTGCTCATAGGT	60.079	45.833	0.00	0.00	0.00	3.08
5111	5168	4.469657	AGTCTCTCTAAGGTGCTCATAGG	58.530	47.826	0.00	0.00	0.00	2.57
5112	5169	7.202016	CTTAGTCTCTCTAAGGTGCTCATAG	57.798	44.000	6.70	0.00	46.97	2.23
5123	5180	3.560481	CGACGATGGCTTAGTCTCTCTAA	59.440	47.826	10.90	0.00	37.15	2.10
5124	5181	3.132160	CGACGATGGCTTAGTCTCTCTA	58.868	50.000	10.90	0.00	33.10	2.43
5125	5182	1.944024	CGACGATGGCTTAGTCTCTCT	59.056	52.381	10.90	0.00	33.10	3.10
5126	5183	1.941294	TCGACGATGGCTTAGTCTCTC	59.059	52.381	10.90	0.00	33.10	3.20
5127	5184	2.039818	TCGACGATGGCTTAGTCTCT	57.960	50.000	10.90	0.00	33.10	3.10
5128	5185	2.846039	TTCGACGATGGCTTAGTCTC	57.154	50.000	0.00	0.00	33.10	3.36
5129	5186	3.056749	ACTTTTCGACGATGGCTTAGTCT	60.057	43.478	0.00	0.00	33.10	3.24
5130	5187	3.251571	ACTTTTCGACGATGGCTTAGTC	58.748	45.455	0.00	3.96	0.00	2.59
5131	5188	3.056749	AGACTTTTCGACGATGGCTTAGT	60.057	43.478	0.00	0.00	0.00	2.24
5132	5189	3.304559	CAGACTTTTCGACGATGGCTTAG	59.695	47.826	0.00	0.00	0.00	2.18
5133	5190	3.057104	TCAGACTTTTCGACGATGGCTTA	60.057	43.478	0.00	0.00	0.00	3.09
5134	5191	2.069273	CAGACTTTTCGACGATGGCTT	58.931	47.619	0.00	0.00	0.00	4.35
5135	5192	1.272490	TCAGACTTTTCGACGATGGCT	59.728	47.619	0.00	0.00	0.00	4.75
5136	5193	1.710013	TCAGACTTTTCGACGATGGC	58.290	50.000	0.00	0.00	0.00	4.40
5137	5194	4.928661	ATTTCAGACTTTTCGACGATGG	57.071	40.909	0.00	0.00	0.00	3.51
5138	5195	8.880768	AATTTATTTCAGACTTTTCGACGATG	57.119	30.769	0.00	0.00	0.00	3.84
5139	5196	8.717821	TGAATTTATTTCAGACTTTTCGACGAT	58.282	29.630	0.00	0.00	39.44	3.73
5140	5197	8.078959	TGAATTTATTTCAGACTTTTCGACGA	57.921	30.769	0.00	0.00	39.44	4.20
5141	5198	8.708075	TTGAATTTATTTCAGACTTTTCGACG	57.292	30.769	0.00	0.00	44.90	5.12
5162	5219	9.909644	GTACTAGACTTAGACTTGACATTTGAA	57.090	33.333	0.00	0.00	0.00	2.69
5163	5220	9.298250	AGTACTAGACTTAGACTTGACATTTGA	57.702	33.333	0.00	0.00	33.13	2.69
5179	5236	3.833070	CACCAGGGTTCAAGTACTAGACT	59.167	47.826	0.00	0.00	41.56	3.24
5180	5237	3.056035	CCACCAGGGTTCAAGTACTAGAC	60.056	52.174	0.00	0.00	0.00	2.59
5181	5238	3.170717	CCACCAGGGTTCAAGTACTAGA	58.829	50.000	0.00	0.00	0.00	2.43
5182	5239	3.611766	CCACCAGGGTTCAAGTACTAG	57.388	52.381	0.00	0.00	0.00	2.57
5195	5252	0.191064	TAGGAGGATAGCCCACCAGG	59.809	60.000	12.36	0.00	46.85	4.45
5196	5253	1.694696	GTTAGGAGGATAGCCCACCAG	59.305	57.143	12.36	0.00	46.85	4.00
5197	5254	1.694693	GGTTAGGAGGATAGCCCACCA	60.695	57.143	12.36	0.00	46.85	4.17
5198	5255	1.057471	GGTTAGGAGGATAGCCCACC	58.943	60.000	0.00	0.00	45.03	4.61
5199	5256	1.802553	TGGTTAGGAGGATAGCCCAC	58.197	55.000	0.00	0.00	37.41	4.61
5200	5257	2.621070	GATGGTTAGGAGGATAGCCCA	58.379	52.381	0.00	0.00	37.41	5.36
5201	5258	1.909986	GGATGGTTAGGAGGATAGCCC	59.090	57.143	0.00	0.00	33.31	5.19
5202	5259	2.621070	TGGATGGTTAGGAGGATAGCC	58.379	52.381	0.00	0.00	0.00	3.93
5203	5260	3.244596	GGTTGGATGGTTAGGAGGATAGC	60.245	52.174	0.00	0.00	0.00	2.97
5204	5261	3.973973	TGGTTGGATGGTTAGGAGGATAG	59.026	47.826	0.00	0.00	0.00	2.08
5205	5262	3.714798	GTGGTTGGATGGTTAGGAGGATA	59.285	47.826	0.00	0.00	0.00	2.59
5206	5263	2.509964	GTGGTTGGATGGTTAGGAGGAT	59.490	50.000	0.00	0.00	0.00	3.24
5207	5264	1.913419	GTGGTTGGATGGTTAGGAGGA	59.087	52.381	0.00	0.00	0.00	3.71
5208	5265	1.633432	TGTGGTTGGATGGTTAGGAGG	59.367	52.381	0.00	0.00	0.00	4.30
5209	5266	3.244911	ACTTGTGGTTGGATGGTTAGGAG	60.245	47.826	0.00	0.00	0.00	3.69
5210	5267	2.714250	ACTTGTGGTTGGATGGTTAGGA	59.286	45.455	0.00	0.00	0.00	2.94
5211	5268	3.154827	ACTTGTGGTTGGATGGTTAGG	57.845	47.619	0.00	0.00	0.00	2.69
5222	5279	0.524604	GCGCGAAACAACTTGTGGTT	60.525	50.000	12.10	0.00	40.99	3.67
5223	5280	1.063488	GCGCGAAACAACTTGTGGT	59.937	52.632	12.10	0.00	0.00	4.16
5224	5281	2.003443	CGCGCGAAACAACTTGTGG	61.003	57.895	28.94	0.00	0.00	4.17
5225	5282	0.859788	AACGCGCGAAACAACTTGTG	60.860	50.000	39.36	1.99	0.00	3.33
5226	5283	0.179184	AAACGCGCGAAACAACTTGT	60.179	45.000	39.36	6.60	0.00	3.16
5227	5284	0.911184	AAAACGCGCGAAACAACTTG	59.089	45.000	39.36	2.87	0.00	3.16
5228	5285	1.319079	CAAAAACGCGCGAAACAACTT	59.681	42.857	39.36	15.98	0.00	2.66
5229	5286	0.911184	CAAAAACGCGCGAAACAACT	59.089	45.000	39.36	9.38	0.00	3.16
5230	5287	0.646547	GCAAAAACGCGCGAAACAAC	60.647	50.000	39.36	17.47	0.00	3.32
5231	5288	0.798771	AGCAAAAACGCGCGAAACAA	60.799	45.000	39.36	0.00	36.85	2.83
5232	5289	0.798771	AAGCAAAAACGCGCGAAACA	60.799	45.000	39.36	0.00	36.85	2.83
5233	5290	0.296349	AAAGCAAAAACGCGCGAAAC	59.704	45.000	39.36	18.38	36.85	2.78
5234	5291	0.296056	CAAAGCAAAAACGCGCGAAA	59.704	45.000	39.36	0.00	36.85	3.46
5235	5292	0.798771	ACAAAGCAAAAACGCGCGAA	60.799	45.000	39.36	0.00	36.85	4.70
5236	5293	0.027716	TACAAAGCAAAAACGCGCGA	59.972	45.000	39.36	5.70	36.85	5.87
5237	5294	1.049251	ATACAAAGCAAAAACGCGCG	58.951	45.000	30.96	30.96	36.85	6.86
5238	5295	2.217620	ACAATACAAAGCAAAAACGCGC	59.782	40.909	5.73	0.00	36.85	6.86
5239	5296	3.728718	AGACAATACAAAGCAAAAACGCG	59.271	39.130	3.53	3.53	36.85	6.01
5240	5297	6.927933	ATAGACAATACAAAGCAAAAACGC	57.072	33.333	0.00	0.00	0.00	4.84
5262	5319	9.959749	AACGATTGAAACTGTGTTACAAAATAT	57.040	25.926	0.00	0.00	0.00	1.28
5264	5321	9.959749	ATAACGATTGAAACTGTGTTACAAAAT	57.040	25.926	0.00	0.00	0.00	1.82
5268	5325	9.478768	TCTTATAACGATTGAAACTGTGTTACA	57.521	29.630	0.00	0.00	0.00	2.41
5291	5348	9.075678	CTCTCTCCCATATTTTTGCAATATCTT	57.924	33.333	0.00	0.00	0.00	2.40
5292	5349	8.443176	TCTCTCTCCCATATTTTTGCAATATCT	58.557	33.333	0.00	0.00	0.00	1.98
5293	5350	8.627208	TCTCTCTCCCATATTTTTGCAATATC	57.373	34.615	0.00	0.00	0.00	1.63
5294	5351	9.597681	ATTCTCTCTCCCATATTTTTGCAATAT	57.402	29.630	0.00	0.00	0.00	1.28
5296	5353	7.909485	ATTCTCTCTCCCATATTTTTGCAAT	57.091	32.000	0.00	0.00	0.00	3.56
5305	5362	9.796242	AGGATGTTTATATTCTCTCTCCCATAT	57.204	33.333	0.00	0.00	0.00	1.78
5307	5364	9.796242	ATAGGATGTTTATATTCTCTCTCCCAT	57.204	33.333	0.00	0.00	0.00	4.00
5325	5382	9.896645	CAAGCAAATGGTCTATATATAGGATGT	57.103	33.333	17.81	3.04	0.00	3.06
5328	5385	9.100197	TGTCAAGCAAATGGTCTATATATAGGA	57.900	33.333	17.81	5.07	0.00	2.94
5329	5386	9.725019	TTGTCAAGCAAATGGTCTATATATAGG	57.275	33.333	17.81	3.40	33.53	2.57
5333	5390	9.851686	AAGATTGTCAAGCAAATGGTCTATATA	57.148	29.630	3.27	0.00	40.91	0.86
5334	5391	8.757982	AAGATTGTCAAGCAAATGGTCTATAT	57.242	30.769	3.27	0.00	40.91	0.86
5335	5392	8.579850	AAAGATTGTCAAGCAAATGGTCTATA	57.420	30.769	3.27	0.00	40.91	1.31
5336	5393	7.472334	AAAGATTGTCAAGCAAATGGTCTAT	57.528	32.000	3.27	0.00	40.91	1.98
5337	5394	6.899393	AAAGATTGTCAAGCAAATGGTCTA	57.101	33.333	3.27	0.00	40.91	2.59
5338	5395	5.796424	AAAGATTGTCAAGCAAATGGTCT	57.204	34.783	3.27	0.00	40.91	3.85
5339	5396	6.849588	AAAAAGATTGTCAAGCAAATGGTC	57.150	33.333	3.27	0.00	40.91	4.02
5340	5397	7.653311	GTCTAAAAAGATTGTCAAGCAAATGGT	59.347	33.333	3.27	0.00	40.91	3.55
5341	5398	7.116805	GGTCTAAAAAGATTGTCAAGCAAATGG	59.883	37.037	3.27	0.00	40.91	3.16
5342	5399	7.652909	TGGTCTAAAAAGATTGTCAAGCAAATG	59.347	33.333	3.27	0.00	40.91	2.32
5343	5400	7.725251	TGGTCTAAAAAGATTGTCAAGCAAAT	58.275	30.769	3.27	0.00	40.91	2.32
5344	5401	7.106439	TGGTCTAAAAAGATTGTCAAGCAAA	57.894	32.000	3.27	0.00	40.91	3.68
5345	5402	6.707440	TGGTCTAAAAAGATTGTCAAGCAA	57.293	33.333	3.27	0.00	41.89	3.91
5346	5403	6.899393	ATGGTCTAAAAAGATTGTCAAGCA	57.101	33.333	3.27	0.00	0.00	3.91
5347	5404	7.147976	ACAATGGTCTAAAAAGATTGTCAAGC	58.852	34.615	0.00	0.00	33.02	4.01
5348	5405	8.733857	GACAATGGTCTAAAAAGATTGTCAAG	57.266	34.615	15.04	0.00	46.38	3.02
5365	5422	9.685276	TGTCTGAAATTTCATATAGACAATGGT	57.315	29.630	26.33	0.00	36.41	3.55
5367	5424	9.661187	GCTGTCTGAAATTTCATATAGACAATG	57.339	33.333	27.34	21.41	37.84	2.82
5368	5425	8.844244	GGCTGTCTGAAATTTCATATAGACAAT	58.156	33.333	27.34	0.00	37.84	2.71
5369	5426	7.828717	TGGCTGTCTGAAATTTCATATAGACAA	59.171	33.333	26.36	16.40	37.51	3.18
5370	5427	7.280876	GTGGCTGTCTGAAATTTCATATAGACA	59.719	37.037	25.40	25.40	37.90	3.41
5371	5428	7.280876	TGTGGCTGTCTGAAATTTCATATAGAC	59.719	37.037	24.92	23.45	36.46	2.59
5372	5429	7.337938	TGTGGCTGTCTGAAATTTCATATAGA	58.662	34.615	24.92	15.75	36.46	1.98
5373	5430	7.558161	TGTGGCTGTCTGAAATTTCATATAG	57.442	36.000	20.76	20.07	36.46	1.31
5374	5431	8.523915	AATGTGGCTGTCTGAAATTTCATATA	57.476	30.769	20.76	11.41	36.46	0.86
5375	5432	7.414222	AATGTGGCTGTCTGAAATTTCATAT	57.586	32.000	20.76	0.00	36.46	1.78
5376	5433	6.839124	AATGTGGCTGTCTGAAATTTCATA	57.161	33.333	20.76	11.55	36.46	2.15
5377	5434	5.733620	AATGTGGCTGTCTGAAATTTCAT	57.266	34.783	20.76	0.00	36.46	2.57
5378	5435	5.534207	AAATGTGGCTGTCTGAAATTTCA	57.466	34.783	19.45	19.45	35.57	2.69

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.