Multiple sequence alignment - TraesCS3B01G211500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G211500 chr3B 100.000 5401 0 0 1 5401 250578990 250573590 0.000000e+00 9974.0
1 TraesCS3B01G211500 chr3D 93.728 2264 90 24 750 2977 172032887 172030640 0.000000e+00 3347.0
2 TraesCS3B01G211500 chr3D 94.242 2032 89 18 3059 5082 172030642 172028631 0.000000e+00 3079.0
3 TraesCS3B01G211500 chr3A 92.060 2141 105 29 869 2977 209656799 209654692 0.000000e+00 2952.0
4 TraesCS3B01G211500 chr3A 95.190 1788 76 7 3059 4839 209654694 209652910 0.000000e+00 2817.0
5 TraesCS3B01G211500 chr3A 85.714 154 18 4 667 817 209656959 209656807 5.600000e-35 159.0
6 TraesCS3B01G211500 chrUn 98.730 551 7 0 1 551 14004695 14005245 0.000000e+00 979.0
7 TraesCS3B01G211500 chrUn 98.375 554 9 0 1 554 166753471 166752918 0.000000e+00 974.0
8 TraesCS3B01G211500 chrUn 100.000 87 0 0 579 665 186169588 186169502 1.560000e-35 161.0
9 TraesCS3B01G211500 chrUn 100.000 87 0 0 579 665 247562290 247562376 1.560000e-35 161.0
10 TraesCS3B01G211500 chrUn 100.000 87 0 0 579 665 404402371 404402457 1.560000e-35 161.0
11 TraesCS3B01G211500 chrUn 100.000 87 0 0 579 665 438678402 438678488 1.560000e-35 161.0
12 TraesCS3B01G211500 chrUn 100.000 87 0 0 579 665 438816104 438816190 1.560000e-35 161.0
13 TraesCS3B01G211500 chrUn 100.000 87 0 0 579 665 438858804 438858718 1.560000e-35 161.0
14 TraesCS3B01G211500 chrUn 89.130 46 3 2 5355 5399 461112529 461112485 7.560000e-04 56.5
15 TraesCS3B01G211500 chr5B 98.548 551 7 1 1 551 202155490 202154941 0.000000e+00 972.0
16 TraesCS3B01G211500 chr5B 98.364 550 9 0 2 551 201259111 201258562 0.000000e+00 966.0
17 TraesCS3B01G211500 chr5B 98.192 553 8 1 1 551 217668034 217668586 0.000000e+00 965.0
18 TraesCS3B01G211500 chr5B 98.188 552 9 1 1 552 152533444 152533994 0.000000e+00 963.0
19 TraesCS3B01G211500 chr5B 98.185 551 9 1 1 551 152526604 152527153 0.000000e+00 961.0
20 TraesCS3B01G211500 chr5B 96.000 100 2 1 2963 3062 556628613 556628710 1.560000e-35 161.0
21 TraesCS3B01G211500 chr6B 98.185 551 9 1 1 551 311030461 311031010 0.000000e+00 961.0
22 TraesCS3B01G211500 chr6B 94.393 107 3 3 2963 3066 132894366 132894260 1.560000e-35 161.0
23 TraesCS3B01G211500 chr2B 97.842 556 11 1 3 558 347889861 347889307 0.000000e+00 959.0
24 TraesCS3B01G211500 chr2B 96.907 97 3 0 2966 3062 593680736 593680832 4.330000e-36 163.0
25 TraesCS3B01G211500 chr2B 96.875 96 3 0 2968 3063 77856056 77856151 1.560000e-35 161.0
26 TraesCS3B01G211500 chr2B 89.130 46 3 2 5355 5399 135777443 135777399 7.560000e-04 56.5
27 TraesCS3B01G211500 chr2B 100.000 28 0 0 5179 5206 494858087 494858060 1.000000e-02 52.8
28 TraesCS3B01G211500 chr2B 96.875 32 0 1 5209 5240 566614109 566614079 1.000000e-02 52.8
29 TraesCS3B01G211500 chr7D 97.917 96 2 0 2967 3062 311872943 311872848 3.350000e-37 167.0
30 TraesCS3B01G211500 chr6D 100.000 87 0 0 579 665 283163006 283162920 1.560000e-35 161.0
31 TraesCS3B01G211500 chr6D 100.000 87 0 0 579 665 425969751 425969837 1.560000e-35 161.0
32 TraesCS3B01G211500 chr6D 92.593 108 7 1 2962 3068 459173402 459173509 2.610000e-33 154.0
33 TraesCS3B01G211500 chr6D 97.059 34 0 1 5208 5241 49269680 49269712 7.560000e-04 56.5
34 TraesCS3B01G211500 chr6D 90.698 43 2 2 5355 5396 377452036 377452077 7.560000e-04 56.5
35 TraesCS3B01G211500 chr4D 100.000 87 0 0 579 665 6633497 6633583 1.560000e-35 161.0
36 TraesCS3B01G211500 chr4D 100.000 30 0 0 5205 5234 325747011 325747040 7.560000e-04 56.5
37 TraesCS3B01G211500 chr2D 98.889 90 1 0 2974 3063 113490494 113490405 1.560000e-35 161.0
38 TraesCS3B01G211500 chr7B 95.918 98 2 2 2965 3060 627055484 627055581 2.010000e-34 158.0
39 TraesCS3B01G211500 chr7B 90.909 121 5 6 2945 3062 715302051 715301934 2.010000e-34 158.0
40 TraesCS3B01G211500 chr5A 97.143 35 1 0 5206 5240 12196744 12196778 5.840000e-05 60.2
41 TraesCS3B01G211500 chr5A 89.130 46 3 2 5352 5396 597081482 597081526 7.560000e-04 56.5
42 TraesCS3B01G211500 chr5D 97.059 34 1 0 5205 5238 452674636 452674669 2.100000e-04 58.4
43 TraesCS3B01G211500 chr1D 90.909 44 2 2 5354 5396 255347348 255347390 2.100000e-04 58.4
44 TraesCS3B01G211500 chr4B 89.130 46 3 2 5352 5396 85706585 85706629 7.560000e-04 56.5
45 TraesCS3B01G211500 chr4B 89.130 46 3 2 5355 5399 625856344 625856300 7.560000e-04 56.5
46 TraesCS3B01G211500 chr4A 89.130 46 3 2 5355 5399 490857499 490857455 7.560000e-04 56.5
47 TraesCS3B01G211500 chr2A 100.000 30 0 0 5205 5234 764857585 764857614 7.560000e-04 56.5
48 TraesCS3B01G211500 chr2A 100.000 29 0 0 5179 5207 386009044 386009072 3.000000e-03 54.7
49 TraesCS3B01G211500 chr1A 89.130 46 3 2 5355 5399 481760557 481760513 7.560000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G211500 chr3B 250573590 250578990 5400 True 9974 9974 100.000 1 5401 1 chr3B.!!$R1 5400
1 TraesCS3B01G211500 chr3D 172028631 172032887 4256 True 3213 3347 93.985 750 5082 2 chr3D.!!$R1 4332
2 TraesCS3B01G211500 chr3A 209652910 209656959 4049 True 1976 2952 90.988 667 4839 3 chr3A.!!$R1 4172
3 TraesCS3B01G211500 chrUn 14004695 14005245 550 False 979 979 98.730 1 551 1 chrUn.!!$F1 550
4 TraesCS3B01G211500 chrUn 166752918 166753471 553 True 974 974 98.375 1 554 1 chrUn.!!$R1 553
5 TraesCS3B01G211500 chr5B 202154941 202155490 549 True 972 972 98.548 1 551 1 chr5B.!!$R2 550
6 TraesCS3B01G211500 chr5B 201258562 201259111 549 True 966 966 98.364 2 551 1 chr5B.!!$R1 549
7 TraesCS3B01G211500 chr5B 217668034 217668586 552 False 965 965 98.192 1 551 1 chr5B.!!$F3 550
8 TraesCS3B01G211500 chr5B 152533444 152533994 550 False 963 963 98.188 1 552 1 chr5B.!!$F2 551
9 TraesCS3B01G211500 chr5B 152526604 152527153 549 False 961 961 98.185 1 551 1 chr5B.!!$F1 550
10 TraesCS3B01G211500 chr6B 311030461 311031010 549 False 961 961 98.185 1 551 1 chr6B.!!$F1 550
11 TraesCS3B01G211500 chr2B 347889307 347889861 554 True 959 959 97.842 3 558 1 chr2B.!!$R2 555

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
624 628 0.034477 TTTTCATCGAGCCTTCCCCC 60.034 55.0 0.00 0.00 0.00 5.40 F
658 662 0.035439 CCAAGTGGTAAGGCATCGGT 60.035 55.0 0.00 0.00 0.00 4.69 F
771 777 0.099436 GGTGCTTAAAGGCTCATGCG 59.901 55.0 0.00 0.00 40.82 4.73 F
2296 2338 0.308993 GCCTTGCCGATGATACTTGC 59.691 55.0 0.00 0.00 0.00 4.01 F
3553 3598 0.110295 TACCCTTGCATATGCGGCAT 59.890 50.0 22.21 20.57 45.83 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2440 2482 1.203052 CCATGCACGAGCCTCAAAATT 59.797 47.619 1.39 0.00 41.13 1.82 R
2535 2577 2.693797 ATGAGAAAAGTTGCACTGCG 57.306 45.000 0.00 0.00 0.00 5.18 R
2710 2753 5.246307 GCAAGTCTCCCAAATACAGTAAGT 58.754 41.667 0.00 0.00 0.00 2.24 R
4021 4071 1.069227 CGAGCCTTAAGGTTGTGCAAC 60.069 52.381 22.55 6.52 40.45 4.17 R
5236 5293 0.027716 TACAAAGCAAAAACGCGCGA 59.972 45.000 39.36 5.70 36.85 5.87 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
97 101 3.203040 CCCTATCTCTTGTTTCCCCACAT 59.797 47.826 0.00 0.00 0.00 3.21
233 237 5.444122 GCATCTTGTATATTTCGTCCAAGC 58.556 41.667 0.00 0.00 34.07 4.01
559 563 4.590400 GATGTCCTCATCAGAAACAACG 57.410 45.455 3.72 0.00 46.78 4.10
560 564 2.143122 TGTCCTCATCAGAAACAACGC 58.857 47.619 0.00 0.00 0.00 4.84
561 565 1.126846 GTCCTCATCAGAAACAACGCG 59.873 52.381 3.53 3.53 0.00 6.01
562 566 1.000394 TCCTCATCAGAAACAACGCGA 60.000 47.619 15.93 0.00 0.00 5.87
563 567 1.126846 CCTCATCAGAAACAACGCGAC 59.873 52.381 15.93 0.00 0.00 5.19
564 568 2.061773 CTCATCAGAAACAACGCGACT 58.938 47.619 15.93 0.00 0.00 4.18
565 569 2.476619 CTCATCAGAAACAACGCGACTT 59.523 45.455 15.93 0.00 0.00 3.01
566 570 2.475111 TCATCAGAAACAACGCGACTTC 59.525 45.455 15.93 9.54 0.00 3.01
567 571 2.218953 TCAGAAACAACGCGACTTCT 57.781 45.000 15.93 11.77 0.00 2.85
568 572 2.124903 TCAGAAACAACGCGACTTCTC 58.875 47.619 15.93 3.41 0.00 2.87
569 573 1.129326 AGAAACAACGCGACTTCTCG 58.871 50.000 15.93 0.00 43.28 4.04
570 574 1.126079 GAAACAACGCGACTTCTCGA 58.874 50.000 15.93 0.00 43.06 4.04
571 575 1.122680 GAAACAACGCGACTTCTCGAG 59.877 52.381 15.93 5.93 43.06 4.04
572 576 0.309922 AACAACGCGACTTCTCGAGA 59.690 50.000 15.93 12.08 41.82 4.04
573 577 0.385723 ACAACGCGACTTCTCGAGAC 60.386 55.000 16.36 2.69 41.82 3.36
574 578 1.066114 CAACGCGACTTCTCGAGACC 61.066 60.000 16.36 6.61 41.82 3.85
575 579 2.276743 CGCGACTTCTCGAGACCG 60.277 66.667 16.36 18.85 41.82 4.79
576 580 2.868920 GCGACTTCTCGAGACCGT 59.131 61.111 16.36 15.25 43.06 4.83
577 581 1.512310 GCGACTTCTCGAGACCGTG 60.512 63.158 16.36 7.08 43.06 4.94
578 582 1.512310 CGACTTCTCGAGACCGTGC 60.512 63.158 16.36 8.55 43.06 5.34
579 583 1.877367 GACTTCTCGAGACCGTGCT 59.123 57.895 16.36 0.00 37.05 4.40
580 584 0.241481 GACTTCTCGAGACCGTGCTT 59.759 55.000 16.36 0.00 37.05 3.91
581 585 0.241481 ACTTCTCGAGACCGTGCTTC 59.759 55.000 16.36 0.00 37.05 3.86
582 586 0.523966 CTTCTCGAGACCGTGCTTCT 59.476 55.000 16.36 0.00 37.05 2.85
583 587 0.241213 TTCTCGAGACCGTGCTTCTG 59.759 55.000 16.36 0.00 37.05 3.02
584 588 0.605589 TCTCGAGACCGTGCTTCTGA 60.606 55.000 12.08 0.00 37.05 3.27
585 589 0.241213 CTCGAGACCGTGCTTCTGAA 59.759 55.000 6.58 0.00 37.05 3.02
586 590 0.671796 TCGAGACCGTGCTTCTGAAA 59.328 50.000 0.00 0.00 37.05 2.69
587 591 1.067974 TCGAGACCGTGCTTCTGAAAA 59.932 47.619 0.00 0.00 37.05 2.29
588 592 1.864711 CGAGACCGTGCTTCTGAAAAA 59.135 47.619 0.00 0.00 0.00 1.94
589 593 2.480419 CGAGACCGTGCTTCTGAAAAAT 59.520 45.455 0.00 0.00 0.00 1.82
590 594 3.423645 CGAGACCGTGCTTCTGAAAAATC 60.424 47.826 0.00 0.00 0.00 2.17
591 595 3.744660 AGACCGTGCTTCTGAAAAATCT 58.255 40.909 0.00 0.00 0.00 2.40
592 596 4.894784 AGACCGTGCTTCTGAAAAATCTA 58.105 39.130 0.00 0.00 0.00 1.98
593 597 5.491982 AGACCGTGCTTCTGAAAAATCTAT 58.508 37.500 0.00 0.00 0.00 1.98
594 598 6.640518 AGACCGTGCTTCTGAAAAATCTATA 58.359 36.000 0.00 0.00 0.00 1.31
595 599 7.275920 AGACCGTGCTTCTGAAAAATCTATAT 58.724 34.615 0.00 0.00 0.00 0.86
596 600 7.439655 AGACCGTGCTTCTGAAAAATCTATATC 59.560 37.037 0.00 0.00 0.00 1.63
597 601 6.483640 ACCGTGCTTCTGAAAAATCTATATCC 59.516 38.462 0.00 0.00 0.00 2.59
598 602 6.073003 CCGTGCTTCTGAAAAATCTATATCCC 60.073 42.308 0.00 0.00 0.00 3.85
599 603 6.483307 CGTGCTTCTGAAAAATCTATATCCCA 59.517 38.462 0.00 0.00 0.00 4.37
600 604 7.307632 CGTGCTTCTGAAAAATCTATATCCCAG 60.308 40.741 0.00 0.00 0.00 4.45
601 605 6.488006 TGCTTCTGAAAAATCTATATCCCAGC 59.512 38.462 0.00 0.00 0.00 4.85
602 606 6.714356 GCTTCTGAAAAATCTATATCCCAGCT 59.286 38.462 0.00 0.00 0.00 4.24
603 607 7.094848 GCTTCTGAAAAATCTATATCCCAGCTC 60.095 40.741 0.00 0.00 0.00 4.09
604 608 6.459066 TCTGAAAAATCTATATCCCAGCTCG 58.541 40.000 0.00 0.00 0.00 5.03
605 609 6.042093 TCTGAAAAATCTATATCCCAGCTCGT 59.958 38.462 0.00 0.00 0.00 4.18
606 610 6.591935 TGAAAAATCTATATCCCAGCTCGTT 58.408 36.000 0.00 0.00 0.00 3.85
607 611 7.054124 TGAAAAATCTATATCCCAGCTCGTTT 58.946 34.615 0.00 0.00 0.00 3.60
608 612 7.556275 TGAAAAATCTATATCCCAGCTCGTTTT 59.444 33.333 0.00 0.00 0.00 2.43
609 613 7.497925 AAAATCTATATCCCAGCTCGTTTTC 57.502 36.000 0.00 0.00 0.00 2.29
610 614 5.808366 ATCTATATCCCAGCTCGTTTTCA 57.192 39.130 0.00 0.00 0.00 2.69
611 615 5.808366 TCTATATCCCAGCTCGTTTTCAT 57.192 39.130 0.00 0.00 0.00 2.57
612 616 5.784177 TCTATATCCCAGCTCGTTTTCATC 58.216 41.667 0.00 0.00 0.00 2.92
613 617 1.656652 ATCCCAGCTCGTTTTCATCG 58.343 50.000 0.00 0.00 0.00 3.84
614 618 0.606096 TCCCAGCTCGTTTTCATCGA 59.394 50.000 0.00 0.00 35.96 3.59
621 625 1.661112 CTCGTTTTCATCGAGCCTTCC 59.339 52.381 2.59 0.00 45.77 3.46
622 626 0.727398 CGTTTTCATCGAGCCTTCCC 59.273 55.000 0.00 0.00 0.00 3.97
623 627 1.095600 GTTTTCATCGAGCCTTCCCC 58.904 55.000 0.00 0.00 0.00 4.81
624 628 0.034477 TTTTCATCGAGCCTTCCCCC 60.034 55.000 0.00 0.00 0.00 5.40
639 643 3.700198 CCCCCGTTTGGAGTATAGC 57.300 57.895 0.00 0.00 37.49 2.97
640 644 0.108019 CCCCCGTTTGGAGTATAGCC 59.892 60.000 0.00 0.00 37.49 3.93
641 645 0.834612 CCCCGTTTGGAGTATAGCCA 59.165 55.000 0.00 0.00 37.49 4.75
642 646 1.210967 CCCCGTTTGGAGTATAGCCAA 59.789 52.381 3.45 3.45 43.31 4.52
643 647 2.561569 CCCGTTTGGAGTATAGCCAAG 58.438 52.381 6.99 0.00 45.39 3.61
644 648 2.093128 CCCGTTTGGAGTATAGCCAAGT 60.093 50.000 6.99 0.00 45.39 3.16
645 649 2.936498 CCGTTTGGAGTATAGCCAAGTG 59.064 50.000 6.99 4.79 45.39 3.16
646 650 2.936498 CGTTTGGAGTATAGCCAAGTGG 59.064 50.000 6.99 0.00 45.39 4.00
647 651 3.618997 CGTTTGGAGTATAGCCAAGTGGT 60.619 47.826 6.99 0.00 45.39 4.16
648 652 4.382254 CGTTTGGAGTATAGCCAAGTGGTA 60.382 45.833 6.99 0.00 45.39 3.25
649 653 5.493809 GTTTGGAGTATAGCCAAGTGGTAA 58.506 41.667 6.99 0.00 45.39 2.85
650 654 5.353394 TTGGAGTATAGCCAAGTGGTAAG 57.647 43.478 0.00 0.00 40.32 2.34
651 655 3.709653 TGGAGTATAGCCAAGTGGTAAGG 59.290 47.826 0.00 0.00 37.57 2.69
652 656 8.762559 TTTGGAGTATAGCCAAGTGGTAAGGC 62.763 46.154 6.99 0.00 45.39 4.35
657 661 2.780595 CCAAGTGGTAAGGCATCGG 58.219 57.895 0.00 0.00 0.00 4.18
658 662 0.035439 CCAAGTGGTAAGGCATCGGT 60.035 55.000 0.00 0.00 0.00 4.69
659 663 1.613255 CCAAGTGGTAAGGCATCGGTT 60.613 52.381 0.00 0.00 0.00 4.44
660 664 2.159382 CAAGTGGTAAGGCATCGGTTT 58.841 47.619 0.00 0.00 0.00 3.27
661 665 2.556622 CAAGTGGTAAGGCATCGGTTTT 59.443 45.455 0.00 0.00 0.00 2.43
662 666 2.871453 AGTGGTAAGGCATCGGTTTTT 58.129 42.857 0.00 0.00 0.00 1.94
663 667 2.556622 AGTGGTAAGGCATCGGTTTTTG 59.443 45.455 0.00 0.00 0.00 2.44
664 668 1.889829 TGGTAAGGCATCGGTTTTTGG 59.110 47.619 0.00 0.00 0.00 3.28
665 669 1.203758 GGTAAGGCATCGGTTTTTGGG 59.796 52.381 0.00 0.00 0.00 4.12
675 679 2.517402 TTTTTGGGCCTCGCGTGT 60.517 55.556 5.77 0.00 0.00 4.49
683 687 4.554363 CCTCGCGTGTAGCCTCCG 62.554 72.222 5.77 0.00 44.76 4.63
691 695 4.752879 GTAGCCTCCGCCACGCAA 62.753 66.667 0.00 0.00 34.57 4.85
692 696 3.781307 TAGCCTCCGCCACGCAAT 61.781 61.111 0.00 0.00 34.57 3.56
710 714 2.216750 ATTGCCACAAGGTGCATCGC 62.217 55.000 0.00 0.00 37.19 4.58
715 719 3.869272 CAAGGTGCATCGCTCGGC 61.869 66.667 0.00 0.00 0.00 5.54
722 726 2.664185 CATCGCTCGGCCTGGATG 60.664 66.667 0.00 4.52 0.00 3.51
723 727 4.615815 ATCGCTCGGCCTGGATGC 62.616 66.667 0.00 0.00 0.00 3.91
729 733 2.516930 CGGCCTGGATGCGGAAAT 60.517 61.111 0.00 0.00 33.80 2.17
759 765 0.833287 GCCAGATCCAGAGGTGCTTA 59.167 55.000 0.00 0.00 0.00 3.09
764 770 2.092699 AGATCCAGAGGTGCTTAAAGGC 60.093 50.000 0.00 0.00 0.00 4.35
771 777 0.099436 GGTGCTTAAAGGCTCATGCG 59.901 55.000 0.00 0.00 40.82 4.73
841 848 2.496297 AGAGTTCATGGATGGGATGGT 58.504 47.619 0.00 0.00 0.00 3.55
842 849 2.174210 AGAGTTCATGGATGGGATGGTG 59.826 50.000 0.00 0.00 0.00 4.17
843 850 1.925255 AGTTCATGGATGGGATGGTGT 59.075 47.619 0.00 0.00 0.00 4.16
844 851 2.092212 AGTTCATGGATGGGATGGTGTC 60.092 50.000 0.00 0.00 0.00 3.67
846 853 0.848735 CATGGATGGGATGGTGTCCT 59.151 55.000 0.00 0.00 46.91 3.85
847 854 1.216175 CATGGATGGGATGGTGTCCTT 59.784 52.381 0.00 0.00 46.91 3.36
848 855 1.381867 TGGATGGGATGGTGTCCTTT 58.618 50.000 0.00 0.00 46.91 3.11
849 856 1.715931 TGGATGGGATGGTGTCCTTTT 59.284 47.619 0.00 0.00 46.91 2.27
850 857 2.111613 TGGATGGGATGGTGTCCTTTTT 59.888 45.455 0.00 0.00 46.91 1.94
1073 1082 1.392589 CATCCCCACTCCCAAATTCG 58.607 55.000 0.00 0.00 0.00 3.34
1112 1121 3.092511 GATCCAGGCAGCCTCCCA 61.093 66.667 12.53 0.00 0.00 4.37
1330 1348 2.817396 GAGAACGCTGGCTCAGGC 60.817 66.667 0.00 0.00 37.82 4.85
1628 1657 1.675641 GATGGCGGGTGAAAGCACT 60.676 57.895 0.00 0.00 44.52 4.40
1814 1847 9.013490 CCATCGTTGATTATTTTTCAGAACATC 57.987 33.333 0.00 0.00 0.00 3.06
1834 1867 7.830099 ACATCCTTTTCTTGAATGTTCTTCT 57.170 32.000 0.00 0.00 0.00 2.85
1856 1889 7.273320 TCTATACACCTGCAGTCTATGTTAC 57.727 40.000 13.81 0.00 0.00 2.50
2240 2282 6.094603 GGATGCATTTTAGAGTTGACAGTCAT 59.905 38.462 3.45 0.00 0.00 3.06
2283 2325 5.456822 CGATAGCTTTCTTTTAATGCCTTGC 59.543 40.000 0.00 0.00 0.00 4.01
2296 2338 0.308993 GCCTTGCCGATGATACTTGC 59.691 55.000 0.00 0.00 0.00 4.01
2298 2340 2.224606 CCTTGCCGATGATACTTGCAT 58.775 47.619 0.00 0.00 0.00 3.96
2370 2412 2.568546 TGGCAGAGATAGGGAAGGAA 57.431 50.000 0.00 0.00 0.00 3.36
2420 2462 3.334583 TCTTCCACAGGTGCTTGATAC 57.665 47.619 0.00 0.00 0.00 2.24
2440 2482 7.342581 TGATACTACCCATCTTGCAAATTGTA 58.657 34.615 0.00 0.00 0.00 2.41
2535 2577 5.163754 GGTTATCCGCATAATTCCATACAGC 60.164 44.000 0.00 0.00 0.00 4.40
2600 2642 3.451178 TCTCCTTGCTACCAATAGTCACC 59.549 47.826 0.00 0.00 0.00 4.02
2710 2753 2.247699 TCCGGAGAAAGGATGGAGAA 57.752 50.000 0.00 0.00 31.86 2.87
2825 2868 5.240623 TGGCTGTTCGTTTTCAGTTTCATAT 59.759 36.000 0.00 0.00 34.57 1.78
2847 2890 5.152623 TGTCAAAATTGGTTGTGTTTCCA 57.847 34.783 0.00 0.00 0.00 3.53
2980 3023 8.015185 TGTCACAGGTAATAACTATTACTCCC 57.985 38.462 15.73 3.99 44.55 4.30
2981 3024 7.842743 TGTCACAGGTAATAACTATTACTCCCT 59.157 37.037 15.73 5.77 44.55 4.20
2982 3025 8.358895 GTCACAGGTAATAACTATTACTCCCTC 58.641 40.741 15.73 3.43 44.55 4.30
2983 3026 7.508296 TCACAGGTAATAACTATTACTCCCTCC 59.492 40.741 15.73 2.88 44.55 4.30
2984 3027 6.492772 ACAGGTAATAACTATTACTCCCTCCG 59.507 42.308 15.73 2.19 44.55 4.63
2985 3028 6.492772 CAGGTAATAACTATTACTCCCTCCGT 59.507 42.308 15.73 0.00 44.55 4.69
2986 3029 7.015001 CAGGTAATAACTATTACTCCCTCCGTT 59.985 40.741 15.73 0.00 44.55 4.44
2987 3030 7.232330 AGGTAATAACTATTACTCCCTCCGTTC 59.768 40.741 15.73 0.77 44.55 3.95
2988 3031 6.416631 AATAACTATTACTCCCTCCGTTCC 57.583 41.667 0.00 0.00 0.00 3.62
2989 3032 3.393426 ACTATTACTCCCTCCGTTCCA 57.607 47.619 0.00 0.00 0.00 3.53
2990 3033 3.716431 ACTATTACTCCCTCCGTTCCAA 58.284 45.455 0.00 0.00 0.00 3.53
2991 3034 4.098894 ACTATTACTCCCTCCGTTCCAAA 58.901 43.478 0.00 0.00 0.00 3.28
2992 3035 4.533311 ACTATTACTCCCTCCGTTCCAAAA 59.467 41.667 0.00 0.00 0.00 2.44
2993 3036 4.586306 ATTACTCCCTCCGTTCCAAAAT 57.414 40.909 0.00 0.00 0.00 1.82
2994 3037 5.703730 ATTACTCCCTCCGTTCCAAAATA 57.296 39.130 0.00 0.00 0.00 1.40
2995 3038 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
2996 3039 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
2997 3040 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
2998 3041 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
2999 3042 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
3000 3043 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
3001 3044 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
3002 3045 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
3003 3046 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
3004 3047 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
3005 3048 5.642063 TCCGTTCCAAAATAGATGACTCAAC 59.358 40.000 0.00 0.00 0.00 3.18
3006 3049 5.643777 CCGTTCCAAAATAGATGACTCAACT 59.356 40.000 0.00 0.00 0.00 3.16
3007 3050 6.149474 CCGTTCCAAAATAGATGACTCAACTT 59.851 38.462 0.00 0.00 0.00 2.66
3008 3051 7.308589 CCGTTCCAAAATAGATGACTCAACTTT 60.309 37.037 0.00 0.00 0.00 2.66
3009 3052 8.717821 CGTTCCAAAATAGATGACTCAACTTTA 58.282 33.333 0.00 0.00 0.00 1.85
3035 3078 9.716531 ATACTAACTTTAGTACAAAGTTGGGTC 57.283 33.333 28.62 0.00 46.38 4.46
3036 3079 7.567458 ACTAACTTTAGTACAAAGTTGGGTCA 58.433 34.615 28.62 17.50 46.38 4.02
3037 3080 8.215736 ACTAACTTTAGTACAAAGTTGGGTCAT 58.784 33.333 28.62 17.19 46.38 3.06
3038 3081 7.506328 AACTTTAGTACAAAGTTGGGTCATC 57.494 36.000 23.48 0.00 45.58 2.92
3039 3082 6.838382 ACTTTAGTACAAAGTTGGGTCATCT 58.162 36.000 14.04 0.00 37.18 2.90
3040 3083 7.970102 ACTTTAGTACAAAGTTGGGTCATCTA 58.030 34.615 14.04 0.00 37.18 1.98
3041 3084 8.603304 ACTTTAGTACAAAGTTGGGTCATCTAT 58.397 33.333 14.04 0.00 37.18 1.98
3042 3085 9.449719 CTTTAGTACAAAGTTGGGTCATCTATT 57.550 33.333 0.00 0.00 0.00 1.73
3043 3086 9.802039 TTTAGTACAAAGTTGGGTCATCTATTT 57.198 29.630 0.00 0.00 0.00 1.40
3044 3087 9.802039 TTAGTACAAAGTTGGGTCATCTATTTT 57.198 29.630 0.00 0.00 0.00 1.82
3045 3088 8.110860 AGTACAAAGTTGGGTCATCTATTTTG 57.889 34.615 0.00 0.00 0.00 2.44
3046 3089 6.345096 ACAAAGTTGGGTCATCTATTTTGG 57.655 37.500 0.00 0.00 0.00 3.28
3047 3090 6.074648 ACAAAGTTGGGTCATCTATTTTGGA 58.925 36.000 0.00 0.00 0.00 3.53
3048 3091 6.553100 ACAAAGTTGGGTCATCTATTTTGGAA 59.447 34.615 0.00 0.00 0.00 3.53
3049 3092 6.590234 AAGTTGGGTCATCTATTTTGGAAC 57.410 37.500 0.00 0.00 0.00 3.62
3050 3093 4.700213 AGTTGGGTCATCTATTTTGGAACG 59.300 41.667 0.00 0.00 0.00 3.95
3051 3094 3.616219 TGGGTCATCTATTTTGGAACGG 58.384 45.455 0.00 0.00 0.00 4.44
3052 3095 3.264706 TGGGTCATCTATTTTGGAACGGA 59.735 43.478 0.00 0.00 0.00 4.69
3053 3096 3.877508 GGGTCATCTATTTTGGAACGGAG 59.122 47.826 0.00 0.00 0.00 4.63
3054 3097 3.877508 GGTCATCTATTTTGGAACGGAGG 59.122 47.826 0.00 0.00 0.00 4.30
3055 3098 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
3056 3099 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
3057 3100 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
3058 3101 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
3059 3102 4.355549 TCTATTTTGGAACGGAGGGAGTA 58.644 43.478 0.00 0.00 0.00 2.59
3060 3103 2.845363 TTTTGGAACGGAGGGAGTAC 57.155 50.000 0.00 0.00 0.00 2.73
3066 3109 2.027469 GGAACGGAGGGAGTACAAACAT 60.027 50.000 0.00 0.00 0.00 2.71
3078 3121 9.975218 AGGGAGTACAAACATAAATTTCTGTAT 57.025 29.630 9.37 2.51 0.00 2.29
3102 3146 3.374988 TCGAACTGGCATTTCATGATGAC 59.625 43.478 16.46 0.00 35.53 3.06
3143 3187 2.399916 ACATGCTGAGAGAAGAAGGC 57.600 50.000 0.00 0.00 0.00 4.35
3245 3289 4.421131 ACCTGTGAGATCCTTTCTACTGT 58.579 43.478 0.00 0.00 33.74 3.55
3489 3534 3.514706 TGCAAATGAAAGGCACACCATAT 59.485 39.130 0.00 0.00 39.06 1.78
3520 3565 0.886490 CGATGCCATTCCAGGTAGCC 60.886 60.000 0.00 0.00 0.00 3.93
3531 3576 2.093658 TCCAGGTAGCCGAGTGAATTTC 60.094 50.000 0.00 0.00 0.00 2.17
3553 3598 0.110295 TACCCTTGCATATGCGGCAT 59.890 50.000 22.21 20.57 45.83 4.40
3623 3668 8.414003 TGTGTACAATGTTATTTGCCACTTTTA 58.586 29.630 0.00 0.00 34.95 1.52
3633 3678 9.869757 GTTATTTGCCACTTTTAACCATTCTAT 57.130 29.630 0.00 0.00 0.00 1.98
3652 3697 6.715347 TCTATGTACTCATTAGCAGCTTGA 57.285 37.500 0.00 0.00 35.70 3.02
3871 3921 3.836949 AGCATCATGTTTTAACTTGCCG 58.163 40.909 0.00 0.43 34.95 5.69
4178 4230 7.446319 GGTCCTAACTTACAGTGGTTTTTGTAT 59.554 37.037 0.00 0.00 30.53 2.29
4275 4328 4.866486 GGCTTTAGCTAGCGTTAGTACAAA 59.134 41.667 9.55 5.36 42.15 2.83
4357 4410 9.681062 CTCCAGAAAGTTTATCCCTATGTTTTA 57.319 33.333 0.00 0.00 0.00 1.52
4396 4449 3.567478 ACAATGGAGAGCTTGGATACC 57.433 47.619 0.00 0.00 0.00 2.73
4430 4486 4.101119 AGGTACACCCTGAGCATAATACAC 59.899 45.833 0.00 0.00 44.08 2.90
4491 4547 4.056050 CTGTAATACCGGTCTTGTATGCC 58.944 47.826 12.40 0.00 0.00 4.40
4531 4587 5.180868 GCCGATGAATGATTCTTAGCTTCAT 59.819 40.000 6.73 0.00 38.80 2.57
4589 4645 1.511305 CTTGAGCTGCATGGCCTTG 59.489 57.895 14.22 14.22 0.00 3.61
4653 4709 2.319438 AGGGAGAGGAGGGTATTTCTGT 59.681 50.000 0.00 0.00 0.00 3.41
4654 4710 3.116174 GGGAGAGGAGGGTATTTCTGTT 58.884 50.000 0.00 0.00 0.00 3.16
4705 4761 7.931275 AGTATTTGTTTGTCCTTCTTCAAGAC 58.069 34.615 0.00 0.00 0.00 3.01
4711 4767 6.126883 TGTTTGTCCTTCTTCAAGACCTAGAA 60.127 38.462 0.00 0.00 0.00 2.10
4815 4871 5.640357 GCATGTCAATTGTCATGGTGAAATT 59.360 36.000 32.44 5.98 40.33 1.82
4847 4903 8.115384 CCAGATCATATTATGAAATGGGGGTTA 58.885 37.037 21.78 0.00 43.50 2.85
4857 4914 5.630121 TGAAATGGGGGTTATATACTGCTG 58.370 41.667 0.00 0.00 0.00 4.41
4872 4929 0.040058 TGCTGGAATTGGATGCCACT 59.960 50.000 0.00 0.00 30.78 4.00
4873 4930 1.188863 GCTGGAATTGGATGCCACTT 58.811 50.000 0.00 0.00 30.78 3.16
4874 4931 1.134907 GCTGGAATTGGATGCCACTTG 60.135 52.381 0.00 0.00 30.78 3.16
4875 4932 2.449464 CTGGAATTGGATGCCACTTGA 58.551 47.619 0.00 0.00 30.78 3.02
4876 4933 2.165030 CTGGAATTGGATGCCACTTGAC 59.835 50.000 0.00 0.00 30.78 3.18
4877 4934 2.225091 TGGAATTGGATGCCACTTGACT 60.225 45.455 0.00 0.00 30.78 3.41
4894 4951 6.825213 CACTTGACTGGATGATCTGGAATAAA 59.175 38.462 0.00 0.00 0.00 1.40
4901 4958 7.291885 ACTGGATGATCTGGAATAAATCTCTCA 59.708 37.037 0.00 0.00 0.00 3.27
4909 4966 4.102210 TGGAATAAATCTCTCAGGCCTCAG 59.898 45.833 0.00 0.00 0.00 3.35
4912 4969 1.494960 AATCTCTCAGGCCTCAGTCC 58.505 55.000 0.00 0.00 0.00 3.85
4922 4979 1.606601 CCTCAGTCCCACCTGACGA 60.607 63.158 0.00 0.00 40.26 4.20
4932 4989 3.250323 CCTGACGATGTGCGCTCG 61.250 66.667 15.03 15.03 46.04 5.03
4939 4996 1.617755 CGATGTGCGCTCGAACACTT 61.618 55.000 11.68 7.46 36.34 3.16
4943 5000 2.243957 TGCGCTCGAACACTTGTGG 61.244 57.895 9.73 0.00 0.00 4.17
4944 5001 2.551270 CGCTCGAACACTTGTGGC 59.449 61.111 5.72 0.00 0.00 5.01
4945 5002 2.243957 CGCTCGAACACTTGTGGCA 61.244 57.895 5.72 0.00 0.00 4.92
4947 5004 1.845809 GCTCGAACACTTGTGGCAGG 61.846 60.000 5.72 0.00 0.00 4.85
4948 5005 1.845809 CTCGAACACTTGTGGCAGGC 61.846 60.000 5.72 0.00 0.00 4.85
4949 5006 1.893808 CGAACACTTGTGGCAGGCT 60.894 57.895 5.72 0.00 0.00 4.58
4950 5007 0.602638 CGAACACTTGTGGCAGGCTA 60.603 55.000 5.72 0.00 0.00 3.93
4951 5008 1.160137 GAACACTTGTGGCAGGCTAG 58.840 55.000 5.72 0.00 0.00 3.42
4952 5009 0.474184 AACACTTGTGGCAGGCTAGT 59.526 50.000 5.72 0.00 0.00 2.57
4953 5010 0.250467 ACACTTGTGGCAGGCTAGTG 60.250 55.000 14.78 14.78 42.43 2.74
4954 5011 0.035317 CACTTGTGGCAGGCTAGTGA 59.965 55.000 12.18 0.00 40.39 3.41
4955 5012 0.322975 ACTTGTGGCAGGCTAGTGAG 59.677 55.000 0.00 0.00 0.00 3.51
4956 5013 0.392193 CTTGTGGCAGGCTAGTGAGG 60.392 60.000 0.00 0.00 0.00 3.86
4968 5025 0.907704 TAGTGAGGCCGTGGTTCCAT 60.908 55.000 0.00 0.00 0.00 3.41
5008 5065 3.924918 GAGCATCTCCAATAGCTCGTA 57.075 47.619 0.00 0.00 43.27 3.43
5009 5066 3.570559 GAGCATCTCCAATAGCTCGTAC 58.429 50.000 0.00 0.00 43.27 3.67
5010 5067 2.959030 AGCATCTCCAATAGCTCGTACA 59.041 45.455 0.00 0.00 30.05 2.90
5012 5069 4.119862 GCATCTCCAATAGCTCGTACAAA 58.880 43.478 0.00 0.00 0.00 2.83
5038 5095 7.610305 ACGGGTTGTTTATGAGATAAAGACAAT 59.390 33.333 0.00 0.00 35.56 2.71
5078 5135 6.398234 TCTTCAGCAGATTGTCTATAGGAC 57.602 41.667 0.00 0.00 44.70 3.85
5094 5151 9.988815 GTCTATAGGACAATACATTTGATCAGT 57.011 33.333 0.00 0.00 43.94 3.41
5098 5155 7.383102 AGGACAATACATTTGATCAGTTGTC 57.617 36.000 13.91 16.29 41.74 3.18
5100 5157 7.383102 GACAATACATTTGATCAGTTGTCCT 57.617 36.000 13.91 3.63 38.50 3.85
5101 5158 7.765695 ACAATACATTTGATCAGTTGTCCTT 57.234 32.000 13.91 8.22 0.00 3.36
5102 5159 7.596494 ACAATACATTTGATCAGTTGTCCTTG 58.404 34.615 20.00 20.00 0.00 3.61
5103 5160 7.231317 ACAATACATTTGATCAGTTGTCCTTGT 59.769 33.333 20.73 20.73 0.00 3.16
5104 5161 5.695851 ACATTTGATCAGTTGTCCTTGTC 57.304 39.130 6.75 0.00 0.00 3.18
5105 5162 4.520492 ACATTTGATCAGTTGTCCTTGTCC 59.480 41.667 6.75 0.00 0.00 4.02
5106 5163 2.859165 TGATCAGTTGTCCTTGTCCC 57.141 50.000 0.00 0.00 0.00 4.46
5107 5164 2.338809 TGATCAGTTGTCCTTGTCCCT 58.661 47.619 0.00 0.00 0.00 4.20
5108 5165 3.516586 TGATCAGTTGTCCTTGTCCCTA 58.483 45.455 0.00 0.00 0.00 3.53
5109 5166 4.104086 TGATCAGTTGTCCTTGTCCCTAT 58.896 43.478 0.00 0.00 0.00 2.57
5110 5167 5.277250 TGATCAGTTGTCCTTGTCCCTATA 58.723 41.667 0.00 0.00 0.00 1.31
5111 5168 5.128827 TGATCAGTTGTCCTTGTCCCTATAC 59.871 44.000 0.00 0.00 0.00 1.47
5112 5169 3.773119 TCAGTTGTCCTTGTCCCTATACC 59.227 47.826 0.00 0.00 0.00 2.73
5113 5170 3.775316 CAGTTGTCCTTGTCCCTATACCT 59.225 47.826 0.00 0.00 0.00 3.08
5114 5171 4.960469 CAGTTGTCCTTGTCCCTATACCTA 59.040 45.833 0.00 0.00 0.00 3.08
5115 5172 5.602978 CAGTTGTCCTTGTCCCTATACCTAT 59.397 44.000 0.00 0.00 0.00 2.57
5116 5173 5.602978 AGTTGTCCTTGTCCCTATACCTATG 59.397 44.000 0.00 0.00 0.00 2.23
5117 5174 5.412617 TGTCCTTGTCCCTATACCTATGA 57.587 43.478 0.00 0.00 0.00 2.15
5118 5175 5.394738 TGTCCTTGTCCCTATACCTATGAG 58.605 45.833 0.00 0.00 0.00 2.90
5119 5176 4.221041 GTCCTTGTCCCTATACCTATGAGC 59.779 50.000 0.00 0.00 0.00 4.26
5120 5177 4.140782 TCCTTGTCCCTATACCTATGAGCA 60.141 45.833 0.00 0.00 0.00 4.26
5121 5178 4.021016 CCTTGTCCCTATACCTATGAGCAC 60.021 50.000 0.00 0.00 0.00 4.40
5122 5179 3.507411 TGTCCCTATACCTATGAGCACC 58.493 50.000 0.00 0.00 0.00 5.01
5123 5180 3.142217 TGTCCCTATACCTATGAGCACCT 59.858 47.826 0.00 0.00 0.00 4.00
5124 5181 4.161102 GTCCCTATACCTATGAGCACCTT 58.839 47.826 0.00 0.00 0.00 3.50
5125 5182 5.162914 TGTCCCTATACCTATGAGCACCTTA 60.163 44.000 0.00 0.00 0.00 2.69
5126 5183 5.419471 GTCCCTATACCTATGAGCACCTTAG 59.581 48.000 0.00 0.00 0.00 2.18
5127 5184 5.315109 TCCCTATACCTATGAGCACCTTAGA 59.685 44.000 0.00 0.00 0.00 2.10
5128 5185 5.654650 CCCTATACCTATGAGCACCTTAGAG 59.345 48.000 0.00 0.00 0.00 2.43
5129 5186 6.486056 CCTATACCTATGAGCACCTTAGAGA 58.514 44.000 0.00 0.00 0.00 3.10
5130 5187 6.601613 CCTATACCTATGAGCACCTTAGAGAG 59.398 46.154 0.00 0.00 0.00 3.20
5131 5188 4.528076 ACCTATGAGCACCTTAGAGAGA 57.472 45.455 0.00 0.00 0.00 3.10
5132 5189 4.211920 ACCTATGAGCACCTTAGAGAGAC 58.788 47.826 0.00 0.00 0.00 3.36
5133 5190 4.079443 ACCTATGAGCACCTTAGAGAGACT 60.079 45.833 0.00 0.00 0.00 3.24
5134 5191 5.132985 ACCTATGAGCACCTTAGAGAGACTA 59.867 44.000 0.00 0.00 0.00 2.59
5135 5192 6.065374 CCTATGAGCACCTTAGAGAGACTAA 58.935 44.000 0.00 0.00 38.56 2.24
5145 5202 1.944024 AGAGAGACTAAGCCATCGTCG 59.056 52.381 0.00 0.00 33.10 5.12
5146 5203 1.941294 GAGAGACTAAGCCATCGTCGA 59.059 52.381 0.00 0.00 33.10 4.20
5147 5204 2.355132 GAGAGACTAAGCCATCGTCGAA 59.645 50.000 0.00 0.00 33.10 3.71
5148 5205 2.753452 AGAGACTAAGCCATCGTCGAAA 59.247 45.455 0.00 0.00 33.10 3.46
5149 5206 3.192844 AGAGACTAAGCCATCGTCGAAAA 59.807 43.478 0.00 0.00 33.10 2.29
5150 5207 3.512680 AGACTAAGCCATCGTCGAAAAG 58.487 45.455 0.00 0.00 33.10 2.27
5151 5208 3.056749 AGACTAAGCCATCGTCGAAAAGT 60.057 43.478 0.00 0.00 33.10 2.66
5152 5209 3.251571 ACTAAGCCATCGTCGAAAAGTC 58.748 45.455 0.00 0.00 0.00 3.01
5153 5210 2.457366 AAGCCATCGTCGAAAAGTCT 57.543 45.000 0.00 0.00 0.00 3.24
5154 5211 1.714794 AGCCATCGTCGAAAAGTCTG 58.285 50.000 0.00 0.00 0.00 3.51
5155 5212 1.272490 AGCCATCGTCGAAAAGTCTGA 59.728 47.619 0.00 0.00 0.00 3.27
5156 5213 2.066262 GCCATCGTCGAAAAGTCTGAA 58.934 47.619 0.00 0.00 0.00 3.02
5157 5214 2.478894 GCCATCGTCGAAAAGTCTGAAA 59.521 45.455 0.00 0.00 0.00 2.69
5158 5215 3.125316 GCCATCGTCGAAAAGTCTGAAAT 59.875 43.478 0.00 0.00 0.00 2.17
5159 5216 4.328983 GCCATCGTCGAAAAGTCTGAAATA 59.671 41.667 0.00 0.00 0.00 1.40
5160 5217 5.163893 GCCATCGTCGAAAAGTCTGAAATAA 60.164 40.000 0.00 0.00 0.00 1.40
5161 5218 6.619874 GCCATCGTCGAAAAGTCTGAAATAAA 60.620 38.462 0.00 0.00 0.00 1.40
5162 5219 7.464358 CCATCGTCGAAAAGTCTGAAATAAAT 58.536 34.615 0.00 0.00 0.00 1.40
5163 5220 7.962918 CCATCGTCGAAAAGTCTGAAATAAATT 59.037 33.333 0.00 0.00 0.00 1.82
5164 5221 8.989767 CATCGTCGAAAAGTCTGAAATAAATTC 58.010 33.333 0.00 0.00 38.60 2.17
5165 5222 8.078959 TCGTCGAAAAGTCTGAAATAAATTCA 57.921 30.769 0.00 0.00 45.71 2.57
5188 5245 9.909644 TTCAAATGTCAAGTCTAAGTCTAGTAC 57.090 33.333 0.00 0.00 0.00 2.73
5189 5246 9.298250 TCAAATGTCAAGTCTAAGTCTAGTACT 57.702 33.333 0.00 0.00 41.49 2.73
5200 5257 4.129317 AGTCTAGTACTTGAACCCTGGT 57.871 45.455 8.65 0.00 33.35 4.00
5201 5258 3.833070 AGTCTAGTACTTGAACCCTGGTG 59.167 47.826 8.65 0.00 33.35 4.17
5202 5259 3.056035 GTCTAGTACTTGAACCCTGGTGG 60.056 52.174 8.65 0.00 41.37 4.61
5212 5269 3.568578 CCTGGTGGGCTATCCTCC 58.431 66.667 0.00 0.00 46.71 4.30
5213 5270 1.074167 CCTGGTGGGCTATCCTCCT 60.074 63.158 4.99 0.00 46.67 3.69
5214 5271 0.191064 CCTGGTGGGCTATCCTCCTA 59.809 60.000 4.99 0.00 46.67 2.94
5215 5272 1.414538 CCTGGTGGGCTATCCTCCTAA 60.415 57.143 4.99 0.00 46.67 2.69
5216 5273 1.694696 CTGGTGGGCTATCCTCCTAAC 59.305 57.143 4.99 0.00 46.67 2.34
5217 5274 1.057471 GGTGGGCTATCCTCCTAACC 58.943 60.000 0.00 0.00 43.95 2.85
5218 5275 1.694693 GGTGGGCTATCCTCCTAACCA 60.695 57.143 0.00 0.00 43.95 3.67
5219 5276 2.339769 GTGGGCTATCCTCCTAACCAT 58.660 52.381 0.00 0.00 36.20 3.55
5220 5277 2.303311 GTGGGCTATCCTCCTAACCATC 59.697 54.545 0.00 0.00 36.20 3.51
5221 5278 1.909986 GGGCTATCCTCCTAACCATCC 59.090 57.143 0.00 0.00 0.00 3.51
5222 5279 2.621070 GGCTATCCTCCTAACCATCCA 58.379 52.381 0.00 0.00 0.00 3.41
5223 5280 2.979678 GGCTATCCTCCTAACCATCCAA 59.020 50.000 0.00 0.00 0.00 3.53
5224 5281 3.244596 GGCTATCCTCCTAACCATCCAAC 60.245 52.174 0.00 0.00 0.00 3.77
5225 5282 3.244596 GCTATCCTCCTAACCATCCAACC 60.245 52.174 0.00 0.00 0.00 3.77
5226 5283 2.352561 TCCTCCTAACCATCCAACCA 57.647 50.000 0.00 0.00 0.00 3.67
5227 5284 1.913419 TCCTCCTAACCATCCAACCAC 59.087 52.381 0.00 0.00 0.00 4.16
5228 5285 1.633432 CCTCCTAACCATCCAACCACA 59.367 52.381 0.00 0.00 0.00 4.17
5229 5286 2.041081 CCTCCTAACCATCCAACCACAA 59.959 50.000 0.00 0.00 0.00 3.33
5230 5287 3.347216 CTCCTAACCATCCAACCACAAG 58.653 50.000 0.00 0.00 0.00 3.16
5231 5288 2.714250 TCCTAACCATCCAACCACAAGT 59.286 45.455 0.00 0.00 0.00 3.16
5232 5289 3.139397 TCCTAACCATCCAACCACAAGTT 59.861 43.478 0.00 0.00 40.16 2.66
5240 5297 3.615099 AACCACAAGTTGTTTCGCG 57.385 47.368 5.57 0.00 37.29 5.87
5241 5298 0.524604 AACCACAAGTTGTTTCGCGC 60.525 50.000 5.57 0.00 37.29 6.86
5242 5299 2.003443 CCACAAGTTGTTTCGCGCG 61.003 57.895 26.76 26.76 0.00 6.86
5243 5300 1.297304 CACAAGTTGTTTCGCGCGT 60.297 52.632 30.98 5.11 0.00 6.01
5244 5301 0.859788 CACAAGTTGTTTCGCGCGTT 60.860 50.000 30.98 12.06 0.00 4.84
5245 5302 0.179184 ACAAGTTGTTTCGCGCGTTT 60.179 45.000 30.98 10.70 0.00 3.60
5246 5303 0.911184 CAAGTTGTTTCGCGCGTTTT 59.089 45.000 30.98 11.39 0.00 2.43
5247 5304 1.319079 CAAGTTGTTTCGCGCGTTTTT 59.681 42.857 30.98 12.42 0.00 1.94
5248 5305 0.911184 AGTTGTTTCGCGCGTTTTTG 59.089 45.000 30.98 0.00 0.00 2.44
5249 5306 0.646547 GTTGTTTCGCGCGTTTTTGC 60.647 50.000 30.98 14.95 0.00 3.68
5250 5307 0.798771 TTGTTTCGCGCGTTTTTGCT 60.799 45.000 30.98 0.00 0.00 3.91
5251 5308 0.798771 TGTTTCGCGCGTTTTTGCTT 60.799 45.000 30.98 0.00 0.00 3.91
5252 5309 0.296349 GTTTCGCGCGTTTTTGCTTT 59.704 45.000 30.98 0.00 0.00 3.51
5253 5310 0.296056 TTTCGCGCGTTTTTGCTTTG 59.704 45.000 30.98 0.00 0.00 2.77
5254 5311 0.798771 TTCGCGCGTTTTTGCTTTGT 60.799 45.000 30.98 0.00 0.00 2.83
5255 5312 0.027716 TCGCGCGTTTTTGCTTTGTA 59.972 45.000 30.98 1.54 0.00 2.41
5256 5313 1.049251 CGCGCGTTTTTGCTTTGTAT 58.951 45.000 24.19 0.00 0.00 2.29
5257 5314 1.450161 CGCGCGTTTTTGCTTTGTATT 59.550 42.857 24.19 0.00 0.00 1.89
5258 5315 2.714340 CGCGCGTTTTTGCTTTGTATTG 60.714 45.455 24.19 0.00 0.00 1.90
5259 5316 2.217620 GCGCGTTTTTGCTTTGTATTGT 59.782 40.909 8.43 0.00 0.00 2.71
5260 5317 3.658088 GCGCGTTTTTGCTTTGTATTGTC 60.658 43.478 8.43 0.00 0.00 3.18
5261 5318 3.728718 CGCGTTTTTGCTTTGTATTGTCT 59.271 39.130 0.00 0.00 0.00 3.41
5262 5319 4.907010 CGCGTTTTTGCTTTGTATTGTCTA 59.093 37.500 0.00 0.00 0.00 2.59
5263 5320 5.567534 CGCGTTTTTGCTTTGTATTGTCTAT 59.432 36.000 0.00 0.00 0.00 1.98
5264 5321 6.739100 CGCGTTTTTGCTTTGTATTGTCTATA 59.261 34.615 0.00 0.00 0.00 1.31
5265 5322 7.428183 CGCGTTTTTGCTTTGTATTGTCTATAT 59.572 33.333 0.00 0.00 0.00 0.86
5266 5323 9.072294 GCGTTTTTGCTTTGTATTGTCTATATT 57.928 29.630 0.00 0.00 0.00 1.28
5288 5345 9.959749 ATATTTTGTAACACAGTTTCAATCGTT 57.040 25.926 3.41 0.00 0.00 3.85
5290 5347 9.959749 ATTTTGTAACACAGTTTCAATCGTTAT 57.040 25.926 3.41 0.00 0.00 1.89
5294 5351 9.478768 TGTAACACAGTTTCAATCGTTATAAGA 57.521 29.630 0.00 0.00 0.00 2.10
5317 5374 8.632906 AGATATTGCAAAAATATGGGAGAGAG 57.367 34.615 1.71 0.00 0.00 3.20
5318 5375 8.443176 AGATATTGCAAAAATATGGGAGAGAGA 58.557 33.333 1.71 0.00 0.00 3.10
5319 5376 9.071276 GATATTGCAAAAATATGGGAGAGAGAA 57.929 33.333 1.71 0.00 0.00 2.87
5320 5377 7.909485 ATTGCAAAAATATGGGAGAGAGAAT 57.091 32.000 1.71 0.00 0.00 2.40
5322 5379 9.597681 ATTGCAAAAATATGGGAGAGAGAATAT 57.402 29.630 1.71 0.00 0.00 1.28
5331 5388 9.796242 ATATGGGAGAGAGAATATAAACATCCT 57.204 33.333 0.00 0.00 0.00 3.24
5333 5390 9.796242 ATGGGAGAGAGAATATAAACATCCTAT 57.204 33.333 0.00 0.00 0.00 2.57
5351 5408 9.896645 ACATCCTATATATAGACCATTTGCTTG 57.103 33.333 19.51 6.35 32.05 4.01
5354 5411 9.100197 TCCTATATATAGACCATTTGCTTGACA 57.900 33.333 19.51 0.00 32.05 3.58
5355 5412 9.725019 CCTATATATAGACCATTTGCTTGACAA 57.275 33.333 19.51 0.00 32.28 3.18
5359 5416 8.757982 ATATAGACCATTTGCTTGACAATCTT 57.242 30.769 0.00 0.00 38.31 2.40
5360 5417 5.796424 AGACCATTTGCTTGACAATCTTT 57.204 34.783 0.00 0.00 38.31 2.52
5361 5418 6.165700 AGACCATTTGCTTGACAATCTTTT 57.834 33.333 0.00 0.00 38.31 2.27
5362 5419 6.585416 AGACCATTTGCTTGACAATCTTTTT 58.415 32.000 0.00 0.00 38.31 1.94
5363 5420 7.725251 AGACCATTTGCTTGACAATCTTTTTA 58.275 30.769 0.00 0.00 38.31 1.52
5364 5421 7.869429 AGACCATTTGCTTGACAATCTTTTTAG 59.131 33.333 0.00 0.00 38.31 1.85
5365 5422 7.725251 ACCATTTGCTTGACAATCTTTTTAGA 58.275 30.769 0.00 0.00 38.31 2.10
5366 5423 7.653311 ACCATTTGCTTGACAATCTTTTTAGAC 59.347 33.333 0.00 0.00 38.31 2.59
5367 5424 7.116805 CCATTTGCTTGACAATCTTTTTAGACC 59.883 37.037 0.00 0.00 38.31 3.85
5368 5425 6.707440 TTGCTTGACAATCTTTTTAGACCA 57.293 33.333 0.00 0.00 31.73 4.02
5369 5426 6.899393 TGCTTGACAATCTTTTTAGACCAT 57.101 33.333 0.00 0.00 0.00 3.55
5370 5427 7.288810 TGCTTGACAATCTTTTTAGACCATT 57.711 32.000 0.00 0.00 0.00 3.16
5371 5428 7.147312 TGCTTGACAATCTTTTTAGACCATTG 58.853 34.615 0.00 0.00 0.00 2.82
5372 5429 7.147976 GCTTGACAATCTTTTTAGACCATTGT 58.852 34.615 0.00 0.00 39.76 2.71
5391 5448 9.685276 ACCATTGTCTATATGAAATTTCAGACA 57.315 29.630 25.43 25.43 41.08 3.41
5393 5450 9.661187 CATTGTCTATATGAAATTTCAGACAGC 57.339 33.333 26.61 17.91 38.79 4.40
5394 5451 7.792374 TGTCTATATGAAATTTCAGACAGCC 57.208 36.000 25.43 13.77 41.08 4.85
5395 5452 7.337938 TGTCTATATGAAATTTCAGACAGCCA 58.662 34.615 25.43 15.80 41.08 4.75
5396 5453 7.280876 TGTCTATATGAAATTTCAGACAGCCAC 59.719 37.037 25.43 16.46 41.08 5.01
5397 5454 7.280876 GTCTATATGAAATTTCAGACAGCCACA 59.719 37.037 24.17 2.03 41.08 4.17
5398 5455 7.994911 TCTATATGAAATTTCAGACAGCCACAT 59.005 33.333 24.17 7.75 41.08 3.21
5399 5456 5.733620 ATGAAATTTCAGACAGCCACATT 57.266 34.783 24.17 2.21 41.08 2.71
5400 5457 5.534207 TGAAATTTCAGACAGCCACATTT 57.466 34.783 16.91 0.00 32.50 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
204 208 6.038271 GGACGAAATATACAAGATGCCACTTT 59.962 38.462 0.00 0.00 0.00 2.66
233 237 2.669781 ACCATAATGGGTGCATGAAGG 58.330 47.619 0.00 0.00 43.37 3.46
457 461 1.267832 CGCGCACGCCAACTAAATTAT 60.268 47.619 8.75 0.00 37.98 1.28
558 562 2.276743 CGGTCTCGAGAAGTCGCG 60.277 66.667 18.55 0.00 46.39 5.87
559 563 1.512310 CACGGTCTCGAGAAGTCGC 60.512 63.158 18.55 3.85 46.39 5.19
561 565 0.241481 AAGCACGGTCTCGAGAAGTC 59.759 55.000 18.55 13.29 40.11 3.01
562 566 0.241481 GAAGCACGGTCTCGAGAAGT 59.759 55.000 18.55 17.21 40.11 3.01
563 567 0.523966 AGAAGCACGGTCTCGAGAAG 59.476 55.000 18.55 16.53 40.11 2.85
564 568 0.241213 CAGAAGCACGGTCTCGAGAA 59.759 55.000 18.55 0.00 40.11 2.87
565 569 0.605589 TCAGAAGCACGGTCTCGAGA 60.606 55.000 12.08 12.08 40.11 4.04
566 570 0.241213 TTCAGAAGCACGGTCTCGAG 59.759 55.000 5.93 5.93 40.11 4.04
567 571 0.671796 TTTCAGAAGCACGGTCTCGA 59.328 50.000 0.00 0.00 40.11 4.04
568 572 1.497991 TTTTCAGAAGCACGGTCTCG 58.502 50.000 0.00 0.00 43.02 4.04
569 573 3.748568 AGATTTTTCAGAAGCACGGTCTC 59.251 43.478 0.00 0.00 0.00 3.36
570 574 3.744660 AGATTTTTCAGAAGCACGGTCT 58.255 40.909 0.00 0.00 0.00 3.85
571 575 5.803020 ATAGATTTTTCAGAAGCACGGTC 57.197 39.130 0.00 0.00 0.00 4.79
572 576 6.483640 GGATATAGATTTTTCAGAAGCACGGT 59.516 38.462 0.00 0.00 0.00 4.83
573 577 6.073003 GGGATATAGATTTTTCAGAAGCACGG 60.073 42.308 0.00 0.00 0.00 4.94
574 578 6.483307 TGGGATATAGATTTTTCAGAAGCACG 59.517 38.462 0.00 0.00 0.00 5.34
575 579 7.521261 GCTGGGATATAGATTTTTCAGAAGCAC 60.521 40.741 0.00 0.00 0.00 4.40
576 580 6.488006 GCTGGGATATAGATTTTTCAGAAGCA 59.512 38.462 0.00 0.00 0.00 3.91
577 581 6.714356 AGCTGGGATATAGATTTTTCAGAAGC 59.286 38.462 0.00 0.00 0.00 3.86
578 582 7.117523 CGAGCTGGGATATAGATTTTTCAGAAG 59.882 40.741 0.00 0.00 0.00 2.85
579 583 6.931281 CGAGCTGGGATATAGATTTTTCAGAA 59.069 38.462 0.00 0.00 0.00 3.02
580 584 6.042093 ACGAGCTGGGATATAGATTTTTCAGA 59.958 38.462 0.00 0.00 0.00 3.27
581 585 6.226787 ACGAGCTGGGATATAGATTTTTCAG 58.773 40.000 0.00 0.00 0.00 3.02
582 586 6.174720 ACGAGCTGGGATATAGATTTTTCA 57.825 37.500 0.00 0.00 0.00 2.69
583 587 7.497925 AAACGAGCTGGGATATAGATTTTTC 57.502 36.000 0.00 0.00 0.00 2.29
584 588 7.556275 TGAAAACGAGCTGGGATATAGATTTTT 59.444 33.333 0.00 0.00 0.00 1.94
585 589 7.054124 TGAAAACGAGCTGGGATATAGATTTT 58.946 34.615 0.00 0.00 0.00 1.82
586 590 6.591935 TGAAAACGAGCTGGGATATAGATTT 58.408 36.000 0.00 0.00 0.00 2.17
587 591 6.174720 TGAAAACGAGCTGGGATATAGATT 57.825 37.500 0.00 0.00 0.00 2.40
588 592 5.808366 TGAAAACGAGCTGGGATATAGAT 57.192 39.130 0.00 0.00 0.00 1.98
589 593 5.564848 CGATGAAAACGAGCTGGGATATAGA 60.565 44.000 0.00 0.00 31.90 1.98
590 594 4.623167 CGATGAAAACGAGCTGGGATATAG 59.377 45.833 0.00 0.00 31.90 1.31
591 595 4.279922 TCGATGAAAACGAGCTGGGATATA 59.720 41.667 0.00 0.00 35.75 0.86
592 596 3.069586 TCGATGAAAACGAGCTGGGATAT 59.930 43.478 0.00 0.00 35.75 1.63
593 597 2.429250 TCGATGAAAACGAGCTGGGATA 59.571 45.455 0.00 0.00 35.75 2.59
594 598 1.207089 TCGATGAAAACGAGCTGGGAT 59.793 47.619 0.00 0.00 35.75 3.85
595 599 0.606096 TCGATGAAAACGAGCTGGGA 59.394 50.000 0.00 0.00 35.75 4.37
596 600 3.137484 TCGATGAAAACGAGCTGGG 57.863 52.632 0.00 0.00 35.75 4.45
602 606 1.674817 GGGAAGGCTCGATGAAAACGA 60.675 52.381 0.00 0.00 39.40 3.85
603 607 0.727398 GGGAAGGCTCGATGAAAACG 59.273 55.000 0.00 0.00 0.00 3.60
604 608 1.095600 GGGGAAGGCTCGATGAAAAC 58.904 55.000 0.00 0.00 0.00 2.43
605 609 0.034477 GGGGGAAGGCTCGATGAAAA 60.034 55.000 0.00 0.00 0.00 2.29
606 610 1.607612 GGGGGAAGGCTCGATGAAA 59.392 57.895 0.00 0.00 0.00 2.69
607 611 3.320359 GGGGGAAGGCTCGATGAA 58.680 61.111 0.00 0.00 0.00 2.57
621 625 0.108019 GGCTATACTCCAAACGGGGG 59.892 60.000 0.00 0.00 45.74 5.40
622 626 0.834612 TGGCTATACTCCAAACGGGG 59.165 55.000 0.00 0.00 37.22 5.73
623 627 2.093128 ACTTGGCTATACTCCAAACGGG 60.093 50.000 3.96 0.00 42.45 5.28
624 628 2.936498 CACTTGGCTATACTCCAAACGG 59.064 50.000 3.96 0.00 42.45 4.44
625 629 2.936498 CCACTTGGCTATACTCCAAACG 59.064 50.000 3.96 0.00 42.45 3.60
626 630 3.951663 ACCACTTGGCTATACTCCAAAC 58.048 45.455 0.00 0.00 42.45 2.93
627 631 5.338871 CCTTACCACTTGGCTATACTCCAAA 60.339 44.000 0.00 0.00 42.45 3.28
628 632 4.163458 CCTTACCACTTGGCTATACTCCAA 59.837 45.833 0.00 0.00 40.98 3.53
629 633 3.709653 CCTTACCACTTGGCTATACTCCA 59.290 47.826 0.00 0.00 39.32 3.86
630 634 3.494573 GCCTTACCACTTGGCTATACTCC 60.495 52.174 0.00 0.00 43.05 3.85
631 635 3.134081 TGCCTTACCACTTGGCTATACTC 59.866 47.826 0.00 0.00 46.23 2.59
632 636 3.112263 TGCCTTACCACTTGGCTATACT 58.888 45.455 0.00 0.00 46.23 2.12
633 637 3.553828 TGCCTTACCACTTGGCTATAC 57.446 47.619 0.00 0.00 46.23 1.47
634 638 3.244078 CGATGCCTTACCACTTGGCTATA 60.244 47.826 0.00 0.00 46.23 1.31
635 639 2.485479 CGATGCCTTACCACTTGGCTAT 60.485 50.000 0.00 0.00 46.23 2.97
636 640 1.134521 CGATGCCTTACCACTTGGCTA 60.135 52.381 0.00 0.00 46.23 3.93
637 641 0.392998 CGATGCCTTACCACTTGGCT 60.393 55.000 0.00 0.00 46.23 4.75
638 642 1.376609 CCGATGCCTTACCACTTGGC 61.377 60.000 0.00 0.00 46.26 4.52
639 643 0.035439 ACCGATGCCTTACCACTTGG 60.035 55.000 0.00 0.00 42.17 3.61
640 644 1.821216 AACCGATGCCTTACCACTTG 58.179 50.000 0.00 0.00 0.00 3.16
641 645 2.579410 AAACCGATGCCTTACCACTT 57.421 45.000 0.00 0.00 0.00 3.16
642 646 2.556622 CAAAAACCGATGCCTTACCACT 59.443 45.455 0.00 0.00 0.00 4.00
643 647 2.352323 CCAAAAACCGATGCCTTACCAC 60.352 50.000 0.00 0.00 0.00 4.16
644 648 1.889829 CCAAAAACCGATGCCTTACCA 59.110 47.619 0.00 0.00 0.00 3.25
645 649 1.203758 CCCAAAAACCGATGCCTTACC 59.796 52.381 0.00 0.00 0.00 2.85
646 650 1.403647 GCCCAAAAACCGATGCCTTAC 60.404 52.381 0.00 0.00 0.00 2.34
647 651 0.892063 GCCCAAAAACCGATGCCTTA 59.108 50.000 0.00 0.00 0.00 2.69
648 652 1.671166 GCCCAAAAACCGATGCCTT 59.329 52.632 0.00 0.00 0.00 4.35
649 653 2.282783 GGCCCAAAAACCGATGCCT 61.283 57.895 0.00 0.00 35.99 4.75
650 654 2.225791 GAGGCCCAAAAACCGATGCC 62.226 60.000 0.00 0.00 39.17 4.40
651 655 1.215382 GAGGCCCAAAAACCGATGC 59.785 57.895 0.00 0.00 0.00 3.91
652 656 1.506262 CGAGGCCCAAAAACCGATG 59.494 57.895 0.00 0.00 0.00 3.84
653 657 2.340328 GCGAGGCCCAAAAACCGAT 61.340 57.895 0.00 0.00 0.00 4.18
654 658 2.981350 GCGAGGCCCAAAAACCGA 60.981 61.111 0.00 0.00 0.00 4.69
655 659 4.398598 CGCGAGGCCCAAAAACCG 62.399 66.667 0.00 0.00 0.00 4.44
656 660 3.292159 ACGCGAGGCCCAAAAACC 61.292 61.111 15.93 0.00 0.00 3.27
657 661 1.508808 TACACGCGAGGCCCAAAAAC 61.509 55.000 15.93 0.00 0.00 2.43
658 662 1.227883 TACACGCGAGGCCCAAAAA 60.228 52.632 15.93 0.00 0.00 1.94
659 663 1.669760 CTACACGCGAGGCCCAAAA 60.670 57.895 15.93 0.00 0.00 2.44
660 664 2.047655 CTACACGCGAGGCCCAAA 60.048 61.111 15.93 0.00 0.00 3.28
661 665 4.752879 GCTACACGCGAGGCCCAA 62.753 66.667 15.93 0.00 0.00 4.12
664 668 4.874977 GAGGCTACACGCGAGGCC 62.875 72.222 15.93 19.54 44.38 5.19
665 669 4.874977 GGAGGCTACACGCGAGGC 62.875 72.222 15.93 13.11 40.44 4.70
683 687 2.023223 CTTGTGGCAATTGCGTGGC 61.023 57.895 23.48 10.64 43.26 5.01
685 689 0.940519 CACCTTGTGGCAATTGCGTG 60.941 55.000 23.48 19.28 43.26 5.34
691 695 1.885157 CGATGCACCTTGTGGCAAT 59.115 52.632 0.00 0.00 44.20 3.56
692 696 2.918345 GCGATGCACCTTGTGGCAA 61.918 57.895 0.00 0.00 44.20 4.52
710 714 2.947938 ATTTCCGCATCCAGGCCGAG 62.948 60.000 0.00 0.00 0.00 4.63
715 719 1.160329 GGTCGATTTCCGCATCCAGG 61.160 60.000 0.00 0.00 38.37 4.45
717 721 1.520564 CGGTCGATTTCCGCATCCA 60.521 57.895 0.00 0.00 41.48 3.41
718 722 0.600255 ATCGGTCGATTTCCGCATCC 60.600 55.000 8.01 0.00 46.49 3.51
722 726 0.507358 GCTAATCGGTCGATTTCCGC 59.493 55.000 21.16 17.00 46.49 5.54
724 728 2.135933 CTGGCTAATCGGTCGATTTCC 58.864 52.381 21.16 20.51 41.55 3.13
729 733 0.959553 GGATCTGGCTAATCGGTCGA 59.040 55.000 0.00 0.00 0.00 4.20
735 741 2.549778 GCACCTCTGGATCTGGCTAATC 60.550 54.545 0.00 0.00 0.00 1.75
759 765 1.377725 CTGGTCCGCATGAGCCTTT 60.378 57.895 0.00 0.00 40.88 3.11
817 824 4.506271 CCATCCCATCCATGAACTCTTAGG 60.506 50.000 0.00 0.00 0.00 2.69
818 825 4.103785 ACCATCCCATCCATGAACTCTTAG 59.896 45.833 0.00 0.00 0.00 2.18
821 828 2.174210 CACCATCCCATCCATGAACTCT 59.826 50.000 0.00 0.00 0.00 3.24
825 832 1.215173 GGACACCATCCCATCCATGAA 59.785 52.381 0.00 0.00 42.46 2.57
826 833 0.846015 GGACACCATCCCATCCATGA 59.154 55.000 0.00 0.00 42.46 3.07
827 834 3.426903 GGACACCATCCCATCCATG 57.573 57.895 0.00 0.00 42.46 3.66
858 865 1.063174 GAGACACCAAATGCTCGATGC 59.937 52.381 0.00 0.00 43.25 3.91
859 866 2.625737 AGAGACACCAAATGCTCGATG 58.374 47.619 0.00 0.00 36.88 3.84
860 867 3.340814 AAGAGACACCAAATGCTCGAT 57.659 42.857 0.00 0.00 36.88 3.59
861 868 2.839486 AAGAGACACCAAATGCTCGA 57.161 45.000 0.00 0.00 36.88 4.04
862 869 5.356882 TTTTAAGAGACACCAAATGCTCG 57.643 39.130 0.00 0.00 36.88 5.03
985 994 1.080569 CAACGGGAATTGGCAGTGC 60.081 57.895 6.55 6.55 0.00 4.40
1026 1035 1.130678 GGAGGGGATAAGGGGAGCAG 61.131 65.000 0.00 0.00 0.00 4.24
1148 1157 2.580815 CAGGAGTCGCATGCCTCA 59.419 61.111 20.96 0.89 0.00 3.86
1544 1573 4.214119 CAGAAACATCAGTTACACACCCAG 59.786 45.833 0.00 0.00 36.84 4.45
1622 1651 3.947834 CGAATCCAATTCCCTTAGTGCTT 59.052 43.478 0.00 0.00 35.89 3.91
1628 1657 3.278574 CTGCACGAATCCAATTCCCTTA 58.721 45.455 0.00 0.00 35.89 2.69
1705 1735 7.951287 TCATAAAATTCACATGTTTTGCATCG 58.049 30.769 0.00 0.00 35.19 3.84
1732 1765 9.309516 CTGCAGTTCTAAATTTATGCATTGATT 57.690 29.630 19.33 2.80 42.24 2.57
1748 1781 6.639632 AATTTTCTTTGAGCTGCAGTTCTA 57.360 33.333 27.78 19.67 0.00 2.10
1820 1853 6.595326 TGCAGGTGTATAGAAGAACATTCAAG 59.405 38.462 0.00 0.00 0.00 3.02
1834 1867 6.040504 CAGGTAACATAGACTGCAGGTGTATA 59.959 42.308 19.93 0.00 33.41 1.47
1919 1952 6.236558 AGCCCTTCATCTTAAGTTACCTAC 57.763 41.667 1.63 0.00 0.00 3.18
1920 1953 7.842743 TCTTAGCCCTTCATCTTAAGTTACCTA 59.157 37.037 1.63 0.00 0.00 3.08
2101 2142 7.630082 TGGTTAAGCTTATCCAGTTAGTCAAT 58.370 34.615 25.85 0.00 30.94 2.57
2240 2282 3.116959 TCGCCCTTTCTCCCCTATTTTA 58.883 45.455 0.00 0.00 0.00 1.52
2282 2324 2.613595 TGTGAATGCAAGTATCATCGGC 59.386 45.455 0.00 0.00 0.00 5.54
2283 2325 6.732531 ATATGTGAATGCAAGTATCATCGG 57.267 37.500 0.00 0.00 0.00 4.18
2323 2365 1.315257 ACAATTGGAGGTGCATCGGC 61.315 55.000 10.83 0.00 41.68 5.54
2370 2412 5.230746 TCCAGTAACCCTTTATACCCTCT 57.769 43.478 0.00 0.00 0.00 3.69
2420 2462 8.658609 CAAAATTACAATTTGCAAGATGGGTAG 58.341 33.333 15.37 0.00 38.53 3.18
2440 2482 1.203052 CCATGCACGAGCCTCAAAATT 59.797 47.619 1.39 0.00 41.13 1.82
2535 2577 2.693797 ATGAGAAAAGTTGCACTGCG 57.306 45.000 0.00 0.00 0.00 5.18
2674 2717 6.472887 TCTCCGGAATACTTTCTGAAAACAT 58.527 36.000 5.23 0.00 40.14 2.71
2710 2753 5.246307 GCAAGTCTCCCAAATACAGTAAGT 58.754 41.667 0.00 0.00 0.00 2.24
2814 2857 8.420222 ACAACCAATTTTGACATATGAAACTGA 58.580 29.630 10.38 0.00 0.00 3.41
2815 2858 8.489559 CACAACCAATTTTGACATATGAAACTG 58.510 33.333 10.38 0.00 0.00 3.16
2825 2868 5.152623 TGGAAACACAACCAATTTTGACA 57.847 34.783 0.00 0.00 33.40 3.58
2847 2890 9.525826 AAAGTTCAGACCAGAATAAGAATGAAT 57.474 29.630 0.00 0.00 0.00 2.57
2977 3020 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
2978 3021 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
2979 3022 4.770795 AGTCATCTATTTTGGAACGGAGG 58.229 43.478 0.00 0.00 0.00 4.30
2980 3023 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
2981 3024 5.414789 TGAGTCATCTATTTTGGAACGGA 57.585 39.130 0.00 0.00 0.00 4.69
2982 3025 5.643777 AGTTGAGTCATCTATTTTGGAACGG 59.356 40.000 1.70 0.00 0.00 4.44
2983 3026 6.727824 AGTTGAGTCATCTATTTTGGAACG 57.272 37.500 1.70 0.00 0.00 3.95
3009 3052 9.716531 GACCCAACTTTGTACTAAAGTTAGTAT 57.283 33.333 23.56 15.20 45.57 2.12
3010 3053 8.703743 TGACCCAACTTTGTACTAAAGTTAGTA 58.296 33.333 23.56 6.81 45.57 1.82
3011 3054 7.567458 TGACCCAACTTTGTACTAAAGTTAGT 58.433 34.615 23.56 22.58 45.57 2.24
3012 3055 8.617290 ATGACCCAACTTTGTACTAAAGTTAG 57.383 34.615 23.56 20.79 45.57 2.34
3013 3056 8.434392 AGATGACCCAACTTTGTACTAAAGTTA 58.566 33.333 23.56 14.79 45.57 2.24
3015 3058 6.838382 AGATGACCCAACTTTGTACTAAAGT 58.162 36.000 14.04 14.04 41.82 2.66
3016 3059 9.449719 AATAGATGACCCAACTTTGTACTAAAG 57.550 33.333 13.08 13.08 0.00 1.85
3017 3060 9.802039 AAATAGATGACCCAACTTTGTACTAAA 57.198 29.630 0.00 0.00 0.00 1.85
3018 3061 9.802039 AAAATAGATGACCCAACTTTGTACTAA 57.198 29.630 0.00 0.00 0.00 2.24
3019 3062 9.226606 CAAAATAGATGACCCAACTTTGTACTA 57.773 33.333 0.00 0.00 0.00 1.82
3020 3063 7.176690 CCAAAATAGATGACCCAACTTTGTACT 59.823 37.037 0.00 0.00 0.00 2.73
3021 3064 7.175990 TCCAAAATAGATGACCCAACTTTGTAC 59.824 37.037 0.00 0.00 0.00 2.90
3022 3065 7.235079 TCCAAAATAGATGACCCAACTTTGTA 58.765 34.615 0.00 0.00 0.00 2.41
3023 3066 6.074648 TCCAAAATAGATGACCCAACTTTGT 58.925 36.000 0.00 0.00 0.00 2.83
3024 3067 6.588719 TCCAAAATAGATGACCCAACTTTG 57.411 37.500 0.00 0.00 0.00 2.77
3025 3068 6.294508 CGTTCCAAAATAGATGACCCAACTTT 60.295 38.462 0.00 0.00 0.00 2.66
3026 3069 5.183140 CGTTCCAAAATAGATGACCCAACTT 59.817 40.000 0.00 0.00 0.00 2.66
3027 3070 4.700213 CGTTCCAAAATAGATGACCCAACT 59.300 41.667 0.00 0.00 0.00 3.16
3028 3071 4.142469 CCGTTCCAAAATAGATGACCCAAC 60.142 45.833 0.00 0.00 0.00 3.77
3029 3072 4.013728 CCGTTCCAAAATAGATGACCCAA 58.986 43.478 0.00 0.00 0.00 4.12
3030 3073 3.264706 TCCGTTCCAAAATAGATGACCCA 59.735 43.478 0.00 0.00 0.00 4.51
3031 3074 3.877508 CTCCGTTCCAAAATAGATGACCC 59.122 47.826 0.00 0.00 0.00 4.46
3032 3075 3.877508 CCTCCGTTCCAAAATAGATGACC 59.122 47.826 0.00 0.00 0.00 4.02
3033 3076 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
3034 3077 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
3035 3078 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
3036 3079 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
3037 3080 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
3038 3081 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
3039 3082 3.839490 TGTACTCCCTCCGTTCCAAAATA 59.161 43.478 0.00 0.00 0.00 1.40
3040 3083 2.640826 TGTACTCCCTCCGTTCCAAAAT 59.359 45.455 0.00 0.00 0.00 1.82
3041 3084 2.048601 TGTACTCCCTCCGTTCCAAAA 58.951 47.619 0.00 0.00 0.00 2.44
3042 3085 1.719529 TGTACTCCCTCCGTTCCAAA 58.280 50.000 0.00 0.00 0.00 3.28
3043 3086 1.719529 TTGTACTCCCTCCGTTCCAA 58.280 50.000 0.00 0.00 0.00 3.53
3044 3087 1.345415 GTTTGTACTCCCTCCGTTCCA 59.655 52.381 0.00 0.00 0.00 3.53
3045 3088 1.345415 TGTTTGTACTCCCTCCGTTCC 59.655 52.381 0.00 0.00 0.00 3.62
3046 3089 2.825861 TGTTTGTACTCCCTCCGTTC 57.174 50.000 0.00 0.00 0.00 3.95
3047 3090 4.895668 TTATGTTTGTACTCCCTCCGTT 57.104 40.909 0.00 0.00 0.00 4.44
3048 3091 4.895668 TTTATGTTTGTACTCCCTCCGT 57.104 40.909 0.00 0.00 0.00 4.69
3049 3092 6.598064 AGAAATTTATGTTTGTACTCCCTCCG 59.402 38.462 0.00 0.00 0.00 4.63
3050 3093 7.393515 ACAGAAATTTATGTTTGTACTCCCTCC 59.606 37.037 12.58 0.00 0.00 4.30
3051 3094 8.336801 ACAGAAATTTATGTTTGTACTCCCTC 57.663 34.615 12.58 0.00 0.00 4.30
3052 3095 9.975218 ATACAGAAATTTATGTTTGTACTCCCT 57.025 29.630 22.36 0.00 34.09 4.20
3066 3109 7.441890 TGCCAGTTCGAAATACAGAAATTTA 57.558 32.000 0.00 0.00 0.00 1.40
3078 3121 4.458642 TCATCATGAAATGCCAGTTCGAAA 59.541 37.500 0.00 0.00 46.21 3.46
3102 3146 7.202016 TGTTCAGAGCAACCTACAAAATTAG 57.798 36.000 0.00 0.00 0.00 1.73
3143 3187 1.981495 CCCCCATAGAAGGAAGCTAGG 59.019 57.143 0.00 0.00 0.00 3.02
3330 3375 9.695884 GATTTCTTCATTCTTCGATACAGAAAC 57.304 33.333 2.33 0.00 33.94 2.78
3429 3474 2.609459 GTCCAACGGATAGCACATCAAG 59.391 50.000 1.34 0.00 32.73 3.02
3489 3534 7.340122 TGGAATGGCATCGAAAATTGTATTA 57.660 32.000 0.00 0.00 0.00 0.98
3520 3565 2.295253 AGGGTAGCGAAATTCACTCG 57.705 50.000 0.00 0.00 39.33 4.18
3531 3576 1.568612 CCGCATATGCAAGGGTAGCG 61.569 60.000 26.52 9.66 42.21 4.26
3579 3624 2.760650 CACACTGAGGTGGCTATGTAGA 59.239 50.000 1.29 0.00 46.85 2.59
3623 3668 6.708054 GCTGCTAATGAGTACATAGAATGGTT 59.292 38.462 0.00 0.00 35.50 3.67
3633 3678 5.604758 AGATCAAGCTGCTAATGAGTACA 57.395 39.130 0.90 0.00 0.00 2.90
4021 4071 1.069227 CGAGCCTTAAGGTTGTGCAAC 60.069 52.381 22.55 6.52 40.45 4.17
4275 4328 9.273016 CGAATAAATATCAGGTAAGGTGAATGT 57.727 33.333 0.00 0.00 0.00 2.71
4396 4449 1.475682 GGGTGTACCTGTTAGAGGACG 59.524 57.143 1.26 0.00 46.33 4.79
4421 4477 6.055588 CCCTGTAGAACAAGGGTGTATTATG 58.944 44.000 0.00 0.00 36.80 1.90
4422 4478 5.729718 ACCCTGTAGAACAAGGGTGTATTAT 59.270 40.000 12.56 0.00 43.40 1.28
4430 4486 2.951229 AACACCCTGTAGAACAAGGG 57.049 50.000 6.19 6.19 40.28 3.95
4491 4547 1.924524 TCGGCGAATCTAAAGCTTTCG 59.075 47.619 16.57 13.95 43.72 3.46
4531 4587 1.484240 CAAAAGAGGTGGTGCCCAAAA 59.516 47.619 0.00 0.00 38.26 2.44
4549 4605 7.120579 TCAAGCTGAAAGAGAAACAAACTACAA 59.879 33.333 0.00 0.00 34.07 2.41
4554 4610 4.737279 GCTCAAGCTGAAAGAGAAACAAAC 59.263 41.667 9.21 0.00 38.21 2.93
4589 4645 3.104766 CATCGCCTGATGGTGCAC 58.895 61.111 8.80 8.80 46.76 4.57
4721 4777 6.892658 ATAGCAGTACACAATTTGTCCAAA 57.107 33.333 0.00 0.00 39.91 3.28
4815 4871 8.745590 CCATTTCATAATATGATCTGGAATGCA 58.254 33.333 19.05 0.00 40.73 3.96
4847 4903 4.202599 TGGCATCCAATTCCAGCAGTATAT 60.203 41.667 0.00 0.00 0.00 0.86
4857 4914 2.165030 CAGTCAAGTGGCATCCAATTCC 59.835 50.000 0.00 0.00 39.94 3.01
4872 4929 7.809238 AGATTTATTCCAGATCATCCAGTCAA 58.191 34.615 0.00 0.00 0.00 3.18
4873 4930 7.291885 AGAGATTTATTCCAGATCATCCAGTCA 59.708 37.037 0.00 0.00 0.00 3.41
4874 4931 7.678837 AGAGATTTATTCCAGATCATCCAGTC 58.321 38.462 0.00 0.00 0.00 3.51
4875 4932 7.291885 TGAGAGATTTATTCCAGATCATCCAGT 59.708 37.037 0.00 0.00 0.00 4.00
4876 4933 7.677892 TGAGAGATTTATTCCAGATCATCCAG 58.322 38.462 0.00 0.00 0.00 3.86
4877 4934 7.256583 CCTGAGAGATTTATTCCAGATCATCCA 60.257 40.741 0.00 0.00 0.00 3.41
4894 4951 0.398381 GGGACTGAGGCCTGAGAGAT 60.398 60.000 27.32 2.82 0.00 2.75
4901 4958 2.608988 CAGGTGGGACTGAGGCCT 60.609 66.667 3.86 3.86 40.97 5.19
4909 4966 1.741770 GCACATCGTCAGGTGGGAC 60.742 63.158 0.00 0.00 35.58 4.46
4912 4969 3.490759 GCGCACATCGTCAGGTGG 61.491 66.667 0.30 0.00 41.07 4.61
4922 4979 0.880278 ACAAGTGTTCGAGCGCACAT 60.880 50.000 15.37 2.59 38.02 3.21
4932 4989 1.160137 CTAGCCTGCCACAAGTGTTC 58.840 55.000 0.00 0.00 0.00 3.18
4939 4996 2.959484 GCCTCACTAGCCTGCCACA 61.959 63.158 0.00 0.00 0.00 4.17
4947 5004 1.448013 GAACCACGGCCTCACTAGC 60.448 63.158 0.00 0.00 0.00 3.42
4948 5005 1.218316 GGAACCACGGCCTCACTAG 59.782 63.158 0.00 0.00 0.00 2.57
4949 5006 0.907704 ATGGAACCACGGCCTCACTA 60.908 55.000 0.00 0.00 0.00 2.74
4950 5007 2.224159 ATGGAACCACGGCCTCACT 61.224 57.895 0.00 0.00 0.00 3.41
4951 5008 2.040544 CATGGAACCACGGCCTCAC 61.041 63.158 0.00 0.00 0.00 3.51
4952 5009 2.350895 CATGGAACCACGGCCTCA 59.649 61.111 0.00 0.00 0.00 3.86
4953 5010 2.270874 ATCCATGGAACCACGGCCTC 62.271 60.000 20.67 0.00 0.00 4.70
4954 5011 2.270874 GATCCATGGAACCACGGCCT 62.271 60.000 20.67 0.00 0.00 5.19
4955 5012 1.823899 GATCCATGGAACCACGGCC 60.824 63.158 20.67 0.00 0.00 6.13
4956 5013 1.097547 CAGATCCATGGAACCACGGC 61.098 60.000 20.67 2.58 0.00 5.68
4957 5014 0.464373 CCAGATCCATGGAACCACGG 60.464 60.000 20.67 12.95 43.57 4.94
4958 5015 0.541392 TCCAGATCCATGGAACCACG 59.459 55.000 20.67 7.58 46.45 4.94
4968 5025 1.204704 CTAACACGCTGTCCAGATCCA 59.795 52.381 0.00 0.00 0.00 3.41
5012 5069 6.469410 TGTCTTTATCTCATAAACAACCCGT 58.531 36.000 0.00 0.00 31.84 5.28
5030 5087 6.016276 AGCGTTTTTCACCTCATATTGTCTTT 60.016 34.615 0.00 0.00 0.00 2.52
5031 5088 5.473504 AGCGTTTTTCACCTCATATTGTCTT 59.526 36.000 0.00 0.00 0.00 3.01
5038 5095 4.637276 TGAAGAGCGTTTTTCACCTCATA 58.363 39.130 0.95 0.00 0.00 2.15
5072 5129 9.113838 GACAACTGATCAAATGTATTGTCCTAT 57.886 33.333 11.80 0.00 38.87 2.57
5078 5135 7.596494 ACAAGGACAACTGATCAAATGTATTG 58.404 34.615 21.64 21.64 32.81 1.90
5082 5139 4.520492 GGACAAGGACAACTGATCAAATGT 59.480 41.667 11.68 11.68 0.00 2.71
5083 5140 4.082571 GGGACAAGGACAACTGATCAAATG 60.083 45.833 0.00 1.15 0.00 2.32
5084 5141 4.082125 GGGACAAGGACAACTGATCAAAT 58.918 43.478 0.00 0.00 0.00 2.32
5085 5142 3.138283 AGGGACAAGGACAACTGATCAAA 59.862 43.478 0.00 0.00 0.00 2.69
5086 5143 2.711009 AGGGACAAGGACAACTGATCAA 59.289 45.455 0.00 0.00 0.00 2.57
5087 5144 2.338809 AGGGACAAGGACAACTGATCA 58.661 47.619 0.00 0.00 0.00 2.92
5088 5145 4.762289 ATAGGGACAAGGACAACTGATC 57.238 45.455 0.00 0.00 0.00 2.92
5089 5146 4.409247 GGTATAGGGACAAGGACAACTGAT 59.591 45.833 0.00 0.00 0.00 2.90
5090 5147 3.773119 GGTATAGGGACAAGGACAACTGA 59.227 47.826 0.00 0.00 0.00 3.41
5091 5148 3.775316 AGGTATAGGGACAAGGACAACTG 59.225 47.826 0.00 0.00 0.00 3.16
5092 5149 4.076175 AGGTATAGGGACAAGGACAACT 57.924 45.455 0.00 0.00 0.00 3.16
5093 5150 5.601313 TCATAGGTATAGGGACAAGGACAAC 59.399 44.000 0.00 0.00 0.00 3.32
5094 5151 5.784023 TCATAGGTATAGGGACAAGGACAA 58.216 41.667 0.00 0.00 0.00 3.18
5095 5152 5.394738 CTCATAGGTATAGGGACAAGGACA 58.605 45.833 0.00 0.00 0.00 4.02
5096 5153 4.221041 GCTCATAGGTATAGGGACAAGGAC 59.779 50.000 0.00 0.00 0.00 3.85
5097 5154 4.140782 TGCTCATAGGTATAGGGACAAGGA 60.141 45.833 0.00 0.00 0.00 3.36
5098 5155 4.021016 GTGCTCATAGGTATAGGGACAAGG 60.021 50.000 0.00 0.00 0.00 3.61
5099 5156 4.021016 GGTGCTCATAGGTATAGGGACAAG 60.021 50.000 0.00 0.00 0.00 3.16
5100 5157 3.901844 GGTGCTCATAGGTATAGGGACAA 59.098 47.826 0.00 0.00 0.00 3.18
5101 5158 3.142217 AGGTGCTCATAGGTATAGGGACA 59.858 47.826 0.00 0.00 0.00 4.02
5102 5159 3.780626 AGGTGCTCATAGGTATAGGGAC 58.219 50.000 0.00 0.00 0.00 4.46
5103 5160 4.487282 AAGGTGCTCATAGGTATAGGGA 57.513 45.455 0.00 0.00 0.00 4.20
5104 5161 5.580998 TCTAAGGTGCTCATAGGTATAGGG 58.419 45.833 0.00 0.00 0.00 3.53
5105 5162 6.486056 TCTCTAAGGTGCTCATAGGTATAGG 58.514 44.000 0.00 0.00 0.00 2.57
5106 5163 7.335924 GTCTCTCTAAGGTGCTCATAGGTATAG 59.664 44.444 0.00 0.00 0.00 1.31
5107 5164 7.017750 AGTCTCTCTAAGGTGCTCATAGGTATA 59.982 40.741 0.00 0.00 0.00 1.47
5108 5165 6.007703 GTCTCTCTAAGGTGCTCATAGGTAT 58.992 44.000 0.00 0.00 0.00 2.73
5109 5166 5.132985 AGTCTCTCTAAGGTGCTCATAGGTA 59.867 44.000 0.00 0.00 0.00 3.08
5110 5167 4.079443 AGTCTCTCTAAGGTGCTCATAGGT 60.079 45.833 0.00 0.00 0.00 3.08
5111 5168 4.469657 AGTCTCTCTAAGGTGCTCATAGG 58.530 47.826 0.00 0.00 0.00 2.57
5112 5169 7.202016 CTTAGTCTCTCTAAGGTGCTCATAG 57.798 44.000 6.70 0.00 46.97 2.23
5123 5180 3.560481 CGACGATGGCTTAGTCTCTCTAA 59.440 47.826 10.90 0.00 37.15 2.10
5124 5181 3.132160 CGACGATGGCTTAGTCTCTCTA 58.868 50.000 10.90 0.00 33.10 2.43
5125 5182 1.944024 CGACGATGGCTTAGTCTCTCT 59.056 52.381 10.90 0.00 33.10 3.10
5126 5183 1.941294 TCGACGATGGCTTAGTCTCTC 59.059 52.381 10.90 0.00 33.10 3.20
5127 5184 2.039818 TCGACGATGGCTTAGTCTCT 57.960 50.000 10.90 0.00 33.10 3.10
5128 5185 2.846039 TTCGACGATGGCTTAGTCTC 57.154 50.000 0.00 0.00 33.10 3.36
5129 5186 3.056749 ACTTTTCGACGATGGCTTAGTCT 60.057 43.478 0.00 0.00 33.10 3.24
5130 5187 3.251571 ACTTTTCGACGATGGCTTAGTC 58.748 45.455 0.00 3.96 0.00 2.59
5131 5188 3.056749 AGACTTTTCGACGATGGCTTAGT 60.057 43.478 0.00 0.00 0.00 2.24
5132 5189 3.304559 CAGACTTTTCGACGATGGCTTAG 59.695 47.826 0.00 0.00 0.00 2.18
5133 5190 3.057104 TCAGACTTTTCGACGATGGCTTA 60.057 43.478 0.00 0.00 0.00 3.09
5134 5191 2.069273 CAGACTTTTCGACGATGGCTT 58.931 47.619 0.00 0.00 0.00 4.35
5135 5192 1.272490 TCAGACTTTTCGACGATGGCT 59.728 47.619 0.00 0.00 0.00 4.75
5136 5193 1.710013 TCAGACTTTTCGACGATGGC 58.290 50.000 0.00 0.00 0.00 4.40
5137 5194 4.928661 ATTTCAGACTTTTCGACGATGG 57.071 40.909 0.00 0.00 0.00 3.51
5138 5195 8.880768 AATTTATTTCAGACTTTTCGACGATG 57.119 30.769 0.00 0.00 0.00 3.84
5139 5196 8.717821 TGAATTTATTTCAGACTTTTCGACGAT 58.282 29.630 0.00 0.00 39.44 3.73
5140 5197 8.078959 TGAATTTATTTCAGACTTTTCGACGA 57.921 30.769 0.00 0.00 39.44 4.20
5141 5198 8.708075 TTGAATTTATTTCAGACTTTTCGACG 57.292 30.769 0.00 0.00 44.90 5.12
5162 5219 9.909644 GTACTAGACTTAGACTTGACATTTGAA 57.090 33.333 0.00 0.00 0.00 2.69
5163 5220 9.298250 AGTACTAGACTTAGACTTGACATTTGA 57.702 33.333 0.00 0.00 33.13 2.69
5179 5236 3.833070 CACCAGGGTTCAAGTACTAGACT 59.167 47.826 0.00 0.00 41.56 3.24
5180 5237 3.056035 CCACCAGGGTTCAAGTACTAGAC 60.056 52.174 0.00 0.00 0.00 2.59
5181 5238 3.170717 CCACCAGGGTTCAAGTACTAGA 58.829 50.000 0.00 0.00 0.00 2.43
5182 5239 3.611766 CCACCAGGGTTCAAGTACTAG 57.388 52.381 0.00 0.00 0.00 2.57
5195 5252 0.191064 TAGGAGGATAGCCCACCAGG 59.809 60.000 12.36 0.00 46.85 4.45
5196 5253 1.694696 GTTAGGAGGATAGCCCACCAG 59.305 57.143 12.36 0.00 46.85 4.00
5197 5254 1.694693 GGTTAGGAGGATAGCCCACCA 60.695 57.143 12.36 0.00 46.85 4.17
5198 5255 1.057471 GGTTAGGAGGATAGCCCACC 58.943 60.000 0.00 0.00 45.03 4.61
5199 5256 1.802553 TGGTTAGGAGGATAGCCCAC 58.197 55.000 0.00 0.00 37.41 4.61
5200 5257 2.621070 GATGGTTAGGAGGATAGCCCA 58.379 52.381 0.00 0.00 37.41 5.36
5201 5258 1.909986 GGATGGTTAGGAGGATAGCCC 59.090 57.143 0.00 0.00 33.31 5.19
5202 5259 2.621070 TGGATGGTTAGGAGGATAGCC 58.379 52.381 0.00 0.00 0.00 3.93
5203 5260 3.244596 GGTTGGATGGTTAGGAGGATAGC 60.245 52.174 0.00 0.00 0.00 2.97
5204 5261 3.973973 TGGTTGGATGGTTAGGAGGATAG 59.026 47.826 0.00 0.00 0.00 2.08
5205 5262 3.714798 GTGGTTGGATGGTTAGGAGGATA 59.285 47.826 0.00 0.00 0.00 2.59
5206 5263 2.509964 GTGGTTGGATGGTTAGGAGGAT 59.490 50.000 0.00 0.00 0.00 3.24
5207 5264 1.913419 GTGGTTGGATGGTTAGGAGGA 59.087 52.381 0.00 0.00 0.00 3.71
5208 5265 1.633432 TGTGGTTGGATGGTTAGGAGG 59.367 52.381 0.00 0.00 0.00 4.30
5209 5266 3.244911 ACTTGTGGTTGGATGGTTAGGAG 60.245 47.826 0.00 0.00 0.00 3.69
5210 5267 2.714250 ACTTGTGGTTGGATGGTTAGGA 59.286 45.455 0.00 0.00 0.00 2.94
5211 5268 3.154827 ACTTGTGGTTGGATGGTTAGG 57.845 47.619 0.00 0.00 0.00 2.69
5222 5279 0.524604 GCGCGAAACAACTTGTGGTT 60.525 50.000 12.10 0.00 40.99 3.67
5223 5280 1.063488 GCGCGAAACAACTTGTGGT 59.937 52.632 12.10 0.00 0.00 4.16
5224 5281 2.003443 CGCGCGAAACAACTTGTGG 61.003 57.895 28.94 0.00 0.00 4.17
5225 5282 0.859788 AACGCGCGAAACAACTTGTG 60.860 50.000 39.36 1.99 0.00 3.33
5226 5283 0.179184 AAACGCGCGAAACAACTTGT 60.179 45.000 39.36 6.60 0.00 3.16
5227 5284 0.911184 AAAACGCGCGAAACAACTTG 59.089 45.000 39.36 2.87 0.00 3.16
5228 5285 1.319079 CAAAAACGCGCGAAACAACTT 59.681 42.857 39.36 15.98 0.00 2.66
5229 5286 0.911184 CAAAAACGCGCGAAACAACT 59.089 45.000 39.36 9.38 0.00 3.16
5230 5287 0.646547 GCAAAAACGCGCGAAACAAC 60.647 50.000 39.36 17.47 0.00 3.32
5231 5288 0.798771 AGCAAAAACGCGCGAAACAA 60.799 45.000 39.36 0.00 36.85 2.83
5232 5289 0.798771 AAGCAAAAACGCGCGAAACA 60.799 45.000 39.36 0.00 36.85 2.83
5233 5290 0.296349 AAAGCAAAAACGCGCGAAAC 59.704 45.000 39.36 18.38 36.85 2.78
5234 5291 0.296056 CAAAGCAAAAACGCGCGAAA 59.704 45.000 39.36 0.00 36.85 3.46
5235 5292 0.798771 ACAAAGCAAAAACGCGCGAA 60.799 45.000 39.36 0.00 36.85 4.70
5236 5293 0.027716 TACAAAGCAAAAACGCGCGA 59.972 45.000 39.36 5.70 36.85 5.87
5237 5294 1.049251 ATACAAAGCAAAAACGCGCG 58.951 45.000 30.96 30.96 36.85 6.86
5238 5295 2.217620 ACAATACAAAGCAAAAACGCGC 59.782 40.909 5.73 0.00 36.85 6.86
5239 5296 3.728718 AGACAATACAAAGCAAAAACGCG 59.271 39.130 3.53 3.53 36.85 6.01
5240 5297 6.927933 ATAGACAATACAAAGCAAAAACGC 57.072 33.333 0.00 0.00 0.00 4.84
5262 5319 9.959749 AACGATTGAAACTGTGTTACAAAATAT 57.040 25.926 0.00 0.00 0.00 1.28
5264 5321 9.959749 ATAACGATTGAAACTGTGTTACAAAAT 57.040 25.926 0.00 0.00 0.00 1.82
5268 5325 9.478768 TCTTATAACGATTGAAACTGTGTTACA 57.521 29.630 0.00 0.00 0.00 2.41
5291 5348 9.075678 CTCTCTCCCATATTTTTGCAATATCTT 57.924 33.333 0.00 0.00 0.00 2.40
5292 5349 8.443176 TCTCTCTCCCATATTTTTGCAATATCT 58.557 33.333 0.00 0.00 0.00 1.98
5293 5350 8.627208 TCTCTCTCCCATATTTTTGCAATATC 57.373 34.615 0.00 0.00 0.00 1.63
5294 5351 9.597681 ATTCTCTCTCCCATATTTTTGCAATAT 57.402 29.630 0.00 0.00 0.00 1.28
5296 5353 7.909485 ATTCTCTCTCCCATATTTTTGCAAT 57.091 32.000 0.00 0.00 0.00 3.56
5305 5362 9.796242 AGGATGTTTATATTCTCTCTCCCATAT 57.204 33.333 0.00 0.00 0.00 1.78
5307 5364 9.796242 ATAGGATGTTTATATTCTCTCTCCCAT 57.204 33.333 0.00 0.00 0.00 4.00
5325 5382 9.896645 CAAGCAAATGGTCTATATATAGGATGT 57.103 33.333 17.81 3.04 0.00 3.06
5328 5385 9.100197 TGTCAAGCAAATGGTCTATATATAGGA 57.900 33.333 17.81 5.07 0.00 2.94
5329 5386 9.725019 TTGTCAAGCAAATGGTCTATATATAGG 57.275 33.333 17.81 3.40 33.53 2.57
5333 5390 9.851686 AAGATTGTCAAGCAAATGGTCTATATA 57.148 29.630 3.27 0.00 40.91 0.86
5334 5391 8.757982 AAGATTGTCAAGCAAATGGTCTATAT 57.242 30.769 3.27 0.00 40.91 0.86
5335 5392 8.579850 AAAGATTGTCAAGCAAATGGTCTATA 57.420 30.769 3.27 0.00 40.91 1.31
5336 5393 7.472334 AAAGATTGTCAAGCAAATGGTCTAT 57.528 32.000 3.27 0.00 40.91 1.98
5337 5394 6.899393 AAAGATTGTCAAGCAAATGGTCTA 57.101 33.333 3.27 0.00 40.91 2.59
5338 5395 5.796424 AAAGATTGTCAAGCAAATGGTCT 57.204 34.783 3.27 0.00 40.91 3.85
5339 5396 6.849588 AAAAAGATTGTCAAGCAAATGGTC 57.150 33.333 3.27 0.00 40.91 4.02
5340 5397 7.653311 GTCTAAAAAGATTGTCAAGCAAATGGT 59.347 33.333 3.27 0.00 40.91 3.55
5341 5398 7.116805 GGTCTAAAAAGATTGTCAAGCAAATGG 59.883 37.037 3.27 0.00 40.91 3.16
5342 5399 7.652909 TGGTCTAAAAAGATTGTCAAGCAAATG 59.347 33.333 3.27 0.00 40.91 2.32
5343 5400 7.725251 TGGTCTAAAAAGATTGTCAAGCAAAT 58.275 30.769 3.27 0.00 40.91 2.32
5344 5401 7.106439 TGGTCTAAAAAGATTGTCAAGCAAA 57.894 32.000 3.27 0.00 40.91 3.68
5345 5402 6.707440 TGGTCTAAAAAGATTGTCAAGCAA 57.293 33.333 3.27 0.00 41.89 3.91
5346 5403 6.899393 ATGGTCTAAAAAGATTGTCAAGCA 57.101 33.333 3.27 0.00 0.00 3.91
5347 5404 7.147976 ACAATGGTCTAAAAAGATTGTCAAGC 58.852 34.615 0.00 0.00 33.02 4.01
5348 5405 8.733857 GACAATGGTCTAAAAAGATTGTCAAG 57.266 34.615 15.04 0.00 46.38 3.02
5365 5422 9.685276 TGTCTGAAATTTCATATAGACAATGGT 57.315 29.630 26.33 0.00 36.41 3.55
5367 5424 9.661187 GCTGTCTGAAATTTCATATAGACAATG 57.339 33.333 27.34 21.41 37.84 2.82
5368 5425 8.844244 GGCTGTCTGAAATTTCATATAGACAAT 58.156 33.333 27.34 0.00 37.84 2.71
5369 5426 7.828717 TGGCTGTCTGAAATTTCATATAGACAA 59.171 33.333 26.36 16.40 37.51 3.18
5370 5427 7.280876 GTGGCTGTCTGAAATTTCATATAGACA 59.719 37.037 25.40 25.40 37.90 3.41
5371 5428 7.280876 TGTGGCTGTCTGAAATTTCATATAGAC 59.719 37.037 24.92 23.45 36.46 2.59
5372 5429 7.337938 TGTGGCTGTCTGAAATTTCATATAGA 58.662 34.615 24.92 15.75 36.46 1.98
5373 5430 7.558161 TGTGGCTGTCTGAAATTTCATATAG 57.442 36.000 20.76 20.07 36.46 1.31
5374 5431 8.523915 AATGTGGCTGTCTGAAATTTCATATA 57.476 30.769 20.76 11.41 36.46 0.86
5375 5432 7.414222 AATGTGGCTGTCTGAAATTTCATAT 57.586 32.000 20.76 0.00 36.46 1.78
5376 5433 6.839124 AATGTGGCTGTCTGAAATTTCATA 57.161 33.333 20.76 11.55 36.46 2.15
5377 5434 5.733620 AATGTGGCTGTCTGAAATTTCAT 57.266 34.783 20.76 0.00 36.46 2.57
5378 5435 5.534207 AAATGTGGCTGTCTGAAATTTCA 57.466 34.783 19.45 19.45 35.57 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.