Multiple sequence alignment - TraesCS3B01G210900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G210900 chr3B 100.000 4788 0 0 4869 9656 250003600 250008387 0.000000e+00 8842.0
1 TraesCS3B01G210900 chr3B 100.000 4499 0 0 1 4499 249998732 250003230 0.000000e+00 8309.0
2 TraesCS3B01G210900 chr3B 98.487 727 9 2 1 726 787192061 787191336 0.000000e+00 1280.0
3 TraesCS3B01G210900 chr3B 82.650 951 145 17 5217 6156 43612696 43613637 0.000000e+00 824.0
4 TraesCS3B01G210900 chr3B 80.723 581 83 16 6501 7058 214441904 214442478 8.960000e-115 425.0
5 TraesCS3B01G210900 chr3B 82.073 463 63 8 6501 6943 671380231 671380693 2.550000e-100 377.0
6 TraesCS3B01G210900 chr3B 93.750 144 9 0 3123 3266 805464542 805464685 5.870000e-52 217.0
7 TraesCS3B01G210900 chr3B 93.103 145 9 1 3123 3266 727961834 727961978 2.730000e-50 211.0
8 TraesCS3B01G210900 chr3B 79.874 159 27 4 6344 6502 687791962 687791809 2.850000e-20 111.0
9 TraesCS3B01G210900 chr3B 87.778 90 6 4 8919 9004 215594390 215594302 6.170000e-17 100.0
10 TraesCS3B01G210900 chr3D 90.261 1684 63 29 919 2544 171124696 171126336 0.000000e+00 2108.0
11 TraesCS3B01G210900 chr3D 94.540 1227 59 3 4937 6158 171129663 171130886 0.000000e+00 1888.0
12 TraesCS3B01G210900 chr3D 95.571 1129 33 6 3259 4381 171128121 171129238 0.000000e+00 1792.0
13 TraesCS3B01G210900 chr3D 93.352 1053 43 9 6501 7527 171131070 171132121 0.000000e+00 1531.0
14 TraesCS3B01G210900 chr3D 95.707 955 18 13 7515 8462 171138813 171139751 0.000000e+00 1515.0
15 TraesCS3B01G210900 chr3D 97.797 590 13 0 2534 3123 171127537 171128126 0.000000e+00 1018.0
16 TraesCS3B01G210900 chr3D 92.619 420 19 4 8517 8924 171139917 171140336 2.320000e-165 593.0
17 TraesCS3B01G210900 chr3D 80.000 580 88 20 6501 7058 147922478 147921905 4.200000e-108 403.0
18 TraesCS3B01G210900 chr3D 94.737 171 7 2 6336 6506 171130879 171131047 2.070000e-66 265.0
19 TraesCS3B01G210900 chr3D 95.973 149 6 0 735 883 171124561 171124709 9.690000e-60 243.0
20 TraesCS3B01G210900 chr3D 93.506 77 5 0 4388 4464 171129273 171129349 2.200000e-21 115.0
21 TraesCS3B01G210900 chr3D 79.310 145 27 2 6344 6488 116049057 116048916 2.220000e-16 99.0
22 TraesCS3B01G210900 chr3A 95.805 1311 36 10 7628 8924 208648881 208650186 0.000000e+00 2098.0
23 TraesCS3B01G210900 chr3A 94.622 1283 55 10 4877 6155 208642575 208643847 0.000000e+00 1975.0
24 TraesCS3B01G210900 chr3A 93.286 1266 48 5 3259 4491 208641009 208642270 0.000000e+00 1832.0
25 TraesCS3B01G210900 chr3A 90.990 1343 42 17 6336 7632 208643843 208645152 0.000000e+00 1736.0
26 TraesCS3B01G210900 chr3A 96.416 865 30 1 2259 3123 208640151 208641014 0.000000e+00 1424.0
27 TraesCS3B01G210900 chr3A 98.912 735 7 1 1 734 171241013 171241747 0.000000e+00 1312.0
28 TraesCS3B01G210900 chr3A 91.979 960 29 22 919 1847 208637825 208638767 0.000000e+00 1303.0
29 TraesCS3B01G210900 chr3A 77.465 1136 196 29 5028 6149 165090011 165091100 8.230000e-175 625.0
30 TraesCS3B01G210900 chr3A 91.038 424 16 6 1854 2269 208639724 208640133 3.940000e-153 553.0
31 TraesCS3B01G210900 chr3A 80.000 580 81 17 6501 7051 165091281 165091854 7.030000e-106 396.0
32 TraesCS3B01G210900 chr3A 76.779 745 149 16 5374 6103 632772873 632772138 7.030000e-106 396.0
33 TraesCS3B01G210900 chr3A 98.438 192 2 1 6148 6339 353638878 353638688 4.320000e-88 337.0
34 TraesCS3B01G210900 chr3A 94.702 151 6 2 735 883 208637688 208637838 5.830000e-57 233.0
35 TraesCS3B01G210900 chr7A 98.901 728 7 1 1 727 460545443 460546170 0.000000e+00 1299.0
36 TraesCS3B01G210900 chr7A 98.103 738 10 4 1 735 706453824 706453088 0.000000e+00 1282.0
37 TraesCS3B01G210900 chr7A 98.222 731 12 1 1 730 649395952 649395222 0.000000e+00 1277.0
38 TraesCS3B01G210900 chr7A 76.583 1153 207 37 5000 6132 517888112 517887003 8.410000e-160 575.0
39 TraesCS3B01G210900 chr7A 98.947 190 1 1 6151 6339 593687380 593687191 1.200000e-88 339.0
40 TraesCS3B01G210900 chr7A 79.221 462 73 10 6501 6942 124367309 124366851 5.670000e-77 300.0
41 TraesCS3B01G210900 chr7A 89.189 148 15 1 3116 3262 67729678 67729531 5.960000e-42 183.0
42 TraesCS3B01G210900 chr7A 96.875 32 1 0 7380 7411 34434164 34434133 5.000000e-03 54.7
43 TraesCS3B01G210900 chr1B 98.363 733 10 2 1 731 446625454 446626186 0.000000e+00 1286.0
44 TraesCS3B01G210900 chr1B 86.461 746 80 13 8923 9652 622844700 622843960 0.000000e+00 798.0
45 TraesCS3B01G210900 chr1B 86.482 614 77 5 9040 9652 282283678 282283070 0.000000e+00 669.0
46 TraesCS3B01G210900 chr1B 97.143 140 4 0 3123 3262 26641420 26641559 4.510000e-58 237.0
47 TraesCS3B01G210900 chr1B 95.775 142 6 0 3121 3262 305272063 305271922 7.540000e-56 230.0
48 TraesCS3B01G210900 chr1B 84.141 227 33 3 6501 6725 685167037 685167262 5.870000e-52 217.0
49 TraesCS3B01G210900 chr1B 91.558 154 12 1 3116 3269 597552159 597552311 2.730000e-50 211.0
50 TraesCS3B01G210900 chr1B 89.130 92 6 2 8923 9011 567229501 567229591 2.850000e-20 111.0
51 TraesCS3B01G210900 chr7B 98.493 730 6 3 1 729 456485488 456486213 0.000000e+00 1282.0
52 TraesCS3B01G210900 chr7B 77.739 849 163 19 5284 6119 164944372 164943537 1.870000e-136 497.0
53 TraesCS3B01G210900 chr7B 78.589 411 62 11 6575 6965 337575129 337574725 2.080000e-61 248.0
54 TraesCS3B01G210900 chr7B 82.883 222 22 10 8923 9130 129908056 129908275 1.660000e-42 185.0
55 TraesCS3B01G210900 chr7B 88.667 150 17 0 3115 3264 587668870 587669019 5.960000e-42 183.0
56 TraesCS3B01G210900 chr4A 98.098 736 11 3 1 734 629946810 629946076 0.000000e+00 1279.0
57 TraesCS3B01G210900 chr4A 85.484 744 92 10 8922 9652 651227459 651228199 0.000000e+00 761.0
58 TraesCS3B01G210900 chr4A 93.750 144 8 1 3123 3266 653580000 653580142 2.110000e-51 215.0
59 TraesCS3B01G210900 chr4A 75.451 277 52 12 7174 7447 724617552 724617289 4.740000e-23 121.0
60 TraesCS3B01G210900 chr4A 85.577 104 8 5 8916 9015 599483039 599483139 1.720000e-17 102.0
61 TraesCS3B01G210900 chr6B 97.967 738 12 3 1 736 40128209 40128945 0.000000e+00 1277.0
62 TraesCS3B01G210900 chr6B 81.347 579 82 10 6501 7056 439732061 439731486 1.910000e-121 448.0
63 TraesCS3B01G210900 chr6B 98.953 191 1 1 6150 6339 583448116 583447926 3.340000e-89 340.0
64 TraesCS3B01G210900 chr2D 84.100 761 83 19 8923 9652 577445327 577446080 0.000000e+00 701.0
65 TraesCS3B01G210900 chr2D 83.841 755 84 19 8929 9652 534481329 534480582 0.000000e+00 684.0
66 TraesCS3B01G210900 chr2D 83.465 762 86 25 8923 9652 471508345 471509098 0.000000e+00 673.0
67 TraesCS3B01G210900 chr2D 83.246 764 91 22 8920 9652 222416201 222416958 0.000000e+00 667.0
68 TraesCS3B01G210900 chr2D 78.925 465 63 23 6501 6943 284574648 284574197 5.710000e-72 283.0
69 TraesCS3B01G210900 chr2D 76.438 539 96 17 6501 7018 431928992 431928464 7.440000e-66 263.0
70 TraesCS3B01G210900 chr2D 82.558 86 14 1 2544 2629 66824592 66824508 3.740000e-09 75.0
71 TraesCS3B01G210900 chr2B 86.971 614 76 3 9040 9652 329461475 329460865 0.000000e+00 688.0
72 TraesCS3B01G210900 chr2B 79.017 753 125 26 8923 9650 645508004 645507260 1.460000e-132 484.0
73 TraesCS3B01G210900 chr2B 99.465 187 1 0 6153 6339 245011094 245010908 3.340000e-89 340.0
74 TraesCS3B01G210900 chr2B 98.387 186 2 1 6154 6339 779108856 779108672 9.350000e-85 326.0
75 TraesCS3B01G210900 chr2B 97.222 144 4 0 3123 3266 566440472 566440615 2.690000e-60 244.0
76 TraesCS3B01G210900 chr2B 89.189 148 15 1 3117 3264 709848739 709848885 5.960000e-42 183.0
77 TraesCS3B01G210900 chr2B 81.481 162 24 5 6343 6502 708066959 708066802 2.830000e-25 128.0
78 TraesCS3B01G210900 chr2B 87.097 93 8 3 8916 9004 402547031 402547123 1.720000e-17 102.0
79 TraesCS3B01G210900 chr2B 76.552 145 31 2 2488 2629 104803527 104803671 1.040000e-09 76.8
80 TraesCS3B01G210900 chr5D 83.641 758 90 18 8923 9651 370027966 370027214 0.000000e+00 682.0
81 TraesCS3B01G210900 chr7D 82.353 748 115 13 5349 6087 413439460 413440199 1.370000e-177 634.0
82 TraesCS3B01G210900 chr7D 80.854 726 115 17 5260 5967 638443051 638442332 5.100000e-152 549.0
83 TraesCS3B01G210900 chr7D 79.016 772 139 16 5374 6131 199822271 199821509 3.110000e-139 507.0
84 TraesCS3B01G210900 chr7D 78.478 762 121 23 5144 5891 543601549 543600817 8.840000e-125 459.0
85 TraesCS3B01G210900 chr7D 77.375 579 101 15 6501 7058 199821295 199820726 5.630000e-82 316.0
86 TraesCS3B01G210900 chr7D 85.398 226 32 1 6501 6725 638440070 638439845 5.830000e-57 233.0
87 TraesCS3B01G210900 chr2A 77.697 825 156 20 5322 6131 593841529 593840718 6.780000e-131 479.0
88 TraesCS3B01G210900 chr2A 99.468 188 1 0 6152 6339 463183654 463183841 9.290000e-90 342.0
89 TraesCS3B01G210900 chr2A 98.947 190 1 1 6151 6339 117418915 117419104 1.200000e-88 339.0
90 TraesCS3B01G210900 chr2A 92.701 137 10 0 3126 3262 761822076 761821940 2.130000e-46 198.0
91 TraesCS3B01G210900 chr2A 81.081 148 24 3 6356 6502 12126152 12126008 2.200000e-21 115.0
92 TraesCS3B01G210900 chr2A 79.762 84 16 1 6385 6467 682949624 682949707 1.050000e-04 60.2
93 TraesCS3B01G210900 chr6A 77.083 768 135 31 8919 9649 216014123 216013360 1.170000e-108 405.0
94 TraesCS3B01G210900 chr6A 82.166 157 24 3 6335 6490 127517695 127517848 2.190000e-26 132.0
95 TraesCS3B01G210900 chr4B 98.454 194 1 2 6154 6345 249050547 249050354 3.340000e-89 340.0
96 TraesCS3B01G210900 chr4B 89.535 86 5 3 8923 9004 37568534 37568449 1.330000e-18 106.0
97 TraesCS3B01G210900 chr5A 98.942 189 2 0 6151 6339 489674133 489673945 1.200000e-88 339.0
98 TraesCS3B01G210900 chr5A 90.714 140 3 2 3123 3262 11031253 11031382 2.770000e-40 178.0
99 TraesCS3B01G210900 chr5A 87.671 146 18 0 3121 3266 634053728 634053873 4.640000e-38 171.0
100 TraesCS3B01G210900 chr5A 75.194 387 61 27 7068 7434 682924661 682925032 6.040000e-32 150.0
101 TraesCS3B01G210900 chr5A 88.462 52 6 0 7391 7442 563442203 563442152 8.100000e-06 63.9
102 TraesCS3B01G210900 chr1D 86.344 227 28 3 6501 6725 492498733 492498958 2.690000e-60 244.0
103 TraesCS3B01G210900 chr1D 81.724 290 38 10 6772 7051 433780161 433780445 2.710000e-55 228.0
104 TraesCS3B01G210900 chr5B 95.205 146 6 1 3121 3266 369609101 369609245 7.540000e-56 230.0
105 TraesCS3B01G210900 chr5B 87.778 90 7 3 8919 9004 97826291 97826380 1.720000e-17 102.0
106 TraesCS3B01G210900 chrUn 79.791 287 44 10 6772 7051 294952393 294952672 7.650000e-46 196.0
107 TraesCS3B01G210900 chrUn 76.157 281 43 14 7174 7444 89528057 89528323 1.020000e-24 126.0
108 TraesCS3B01G210900 chr1A 88.235 153 15 2 3113 3265 49523908 49523759 7.700000e-41 180.0
109 TraesCS3B01G210900 chr6D 82.353 68 11 1 6385 6451 11927078 11927011 3.770000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G210900 chr3B 249998732 250008387 9655 False 8575.50 8842 100.000000 1 9656 2 chr3B.!!$F6 9655
1 TraesCS3B01G210900 chr3B 787191336 787192061 725 True 1280.00 1280 98.487000 1 726 1 chr3B.!!$R3 725
2 TraesCS3B01G210900 chr3B 43612696 43613637 941 False 824.00 824 82.650000 5217 6156 1 chr3B.!!$F1 939
3 TraesCS3B01G210900 chr3B 214441904 214442478 574 False 425.00 425 80.723000 6501 7058 1 chr3B.!!$F2 557
4 TraesCS3B01G210900 chr3D 171124561 171132121 7560 False 1120.00 2108 94.467125 735 7527 8 chr3D.!!$F1 6792
5 TraesCS3B01G210900 chr3D 171138813 171140336 1523 False 1054.00 1515 94.163000 7515 8924 2 chr3D.!!$F2 1409
6 TraesCS3B01G210900 chr3D 147921905 147922478 573 True 403.00 403 80.000000 6501 7058 1 chr3D.!!$R2 557
7 TraesCS3B01G210900 chr3A 208637688 208650186 12498 False 1394.25 2098 93.604750 735 8924 8 chr3A.!!$F3 8189
8 TraesCS3B01G210900 chr3A 171241013 171241747 734 False 1312.00 1312 98.912000 1 734 1 chr3A.!!$F1 733
9 TraesCS3B01G210900 chr3A 165090011 165091854 1843 False 510.50 625 78.732500 5028 7051 2 chr3A.!!$F2 2023
10 TraesCS3B01G210900 chr3A 632772138 632772873 735 True 396.00 396 76.779000 5374 6103 1 chr3A.!!$R2 729
11 TraesCS3B01G210900 chr7A 460545443 460546170 727 False 1299.00 1299 98.901000 1 727 1 chr7A.!!$F1 726
12 TraesCS3B01G210900 chr7A 706453088 706453824 736 True 1282.00 1282 98.103000 1 735 1 chr7A.!!$R7 734
13 TraesCS3B01G210900 chr7A 649395222 649395952 730 True 1277.00 1277 98.222000 1 730 1 chr7A.!!$R6 729
14 TraesCS3B01G210900 chr7A 517887003 517888112 1109 True 575.00 575 76.583000 5000 6132 1 chr7A.!!$R4 1132
15 TraesCS3B01G210900 chr1B 446625454 446626186 732 False 1286.00 1286 98.363000 1 731 1 chr1B.!!$F2 730
16 TraesCS3B01G210900 chr1B 622843960 622844700 740 True 798.00 798 86.461000 8923 9652 1 chr1B.!!$R3 729
17 TraesCS3B01G210900 chr1B 282283070 282283678 608 True 669.00 669 86.482000 9040 9652 1 chr1B.!!$R1 612
18 TraesCS3B01G210900 chr7B 456485488 456486213 725 False 1282.00 1282 98.493000 1 729 1 chr7B.!!$F2 728
19 TraesCS3B01G210900 chr7B 164943537 164944372 835 True 497.00 497 77.739000 5284 6119 1 chr7B.!!$R1 835
20 TraesCS3B01G210900 chr4A 629946076 629946810 734 True 1279.00 1279 98.098000 1 734 1 chr4A.!!$R1 733
21 TraesCS3B01G210900 chr4A 651227459 651228199 740 False 761.00 761 85.484000 8922 9652 1 chr4A.!!$F2 730
22 TraesCS3B01G210900 chr6B 40128209 40128945 736 False 1277.00 1277 97.967000 1 736 1 chr6B.!!$F1 735
23 TraesCS3B01G210900 chr6B 439731486 439732061 575 True 448.00 448 81.347000 6501 7056 1 chr6B.!!$R1 555
24 TraesCS3B01G210900 chr2D 577445327 577446080 753 False 701.00 701 84.100000 8923 9652 1 chr2D.!!$F3 729
25 TraesCS3B01G210900 chr2D 534480582 534481329 747 True 684.00 684 83.841000 8929 9652 1 chr2D.!!$R4 723
26 TraesCS3B01G210900 chr2D 471508345 471509098 753 False 673.00 673 83.465000 8923 9652 1 chr2D.!!$F2 729
27 TraesCS3B01G210900 chr2D 222416201 222416958 757 False 667.00 667 83.246000 8920 9652 1 chr2D.!!$F1 732
28 TraesCS3B01G210900 chr2D 431928464 431928992 528 True 263.00 263 76.438000 6501 7018 1 chr2D.!!$R3 517
29 TraesCS3B01G210900 chr2B 329460865 329461475 610 True 688.00 688 86.971000 9040 9652 1 chr2B.!!$R2 612
30 TraesCS3B01G210900 chr2B 645507260 645508004 744 True 484.00 484 79.017000 8923 9650 1 chr2B.!!$R3 727
31 TraesCS3B01G210900 chr5D 370027214 370027966 752 True 682.00 682 83.641000 8923 9651 1 chr5D.!!$R1 728
32 TraesCS3B01G210900 chr7D 413439460 413440199 739 False 634.00 634 82.353000 5349 6087 1 chr7D.!!$F1 738
33 TraesCS3B01G210900 chr7D 543600817 543601549 732 True 459.00 459 78.478000 5144 5891 1 chr7D.!!$R1 747
34 TraesCS3B01G210900 chr7D 199820726 199822271 1545 True 411.50 507 78.195500 5374 7058 2 chr7D.!!$R2 1684
35 TraesCS3B01G210900 chr7D 638439845 638443051 3206 True 391.00 549 83.126000 5260 6725 2 chr7D.!!$R3 1465
36 TraesCS3B01G210900 chr2A 593840718 593841529 811 True 479.00 479 77.697000 5322 6131 1 chr2A.!!$R2 809
37 TraesCS3B01G210900 chr6A 216013360 216014123 763 True 405.00 405 77.083000 8919 9649 1 chr6A.!!$R1 730

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
980 988 0.108329 TCGTCAATTCGCCTTCCTCC 60.108 55.0 0.00 0.0 0.00 4.30 F
1596 1649 0.889994 GGCCATTCATCTGCAACACA 59.110 50.0 0.00 0.0 0.00 3.72 F
3163 5422 0.030705 TCCTGGAGAGGATTGGGGAG 60.031 60.0 0.00 0.0 44.13 4.30 F
3226 5485 0.046242 ATCCTCCCCAATCCACTCCA 59.954 55.0 0.00 0.0 0.00 3.86 F
5119 7417 0.025001 CGTCGTTATTGCGCCAAGAG 59.975 55.0 4.18 0.0 0.00 2.85 F
6166 10443 0.037882 GCTTTTTGCTGAAGGGGAGC 60.038 55.0 0.00 0.0 38.95 4.70 F
6187 10464 0.035598 TTGGCGCAGTGGTAAAGCTA 59.964 50.0 10.83 0.0 0.00 3.32 F
6206 10483 0.037303 ACTGCCTTGTGACCATGAGG 59.963 55.0 0.00 0.0 42.21 3.86 F
6264 10541 0.248289 TGTAGGGAAAGGCTGCGTAC 59.752 55.0 0.00 0.0 37.28 3.67 F
7501 11859 0.394899 GCCCTGAGTGAAATGGAGGG 60.395 60.0 0.00 0.0 45.59 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1852 2865 1.094785 CTTTATGGACAAGGCACGGG 58.905 55.000 0.00 0.0 0.00 5.28 R
3207 5466 0.046242 TGGAGTGGATTGGGGAGGAT 59.954 55.000 0.00 0.0 0.00 3.24 R
5119 7417 0.109504 TTGCCTACAAAAATCGCCGC 60.110 50.000 0.00 0.0 31.21 6.53 R
5212 7510 0.834687 AAGCTAGGGGTGGACGACAA 60.835 55.000 0.00 0.0 0.00 3.18 R
6168 10445 0.035598 TAGCTTTACCACTGCGCCAA 59.964 50.000 4.18 0.0 0.00 4.52 R
7850 15943 2.276732 AGCAGCCTTCAAGCAAGTTA 57.723 45.000 0.00 0.0 34.23 2.24 R
8094 16196 3.488778 AGCATCTTTGAGAGCCATAGG 57.511 47.619 0.00 0.0 0.00 2.57 R
8203 16305 9.350357 TCGTACAAGATTGAACATAACTACTTC 57.650 33.333 0.00 0.0 0.00 3.01 R
8245 16347 7.578310 TCGTAGTCCTATAAGTAAACAGCAT 57.422 36.000 0.00 0.0 0.00 3.79 R
9264 17549 0.173708 CCTCTCACCCAGCTAACGTC 59.826 60.000 0.00 0.0 0.00 4.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
67 68 5.246203 TCTCTCTATGTTGTAACAAGCCTGT 59.754 40.000 1.10 0.00 43.03 4.00
173 174 2.802787 ATCTGAGCGTATGTAGGCAC 57.197 50.000 7.37 2.06 39.38 5.01
336 339 1.237533 TGTGAAGTCGTGCATTGCAT 58.762 45.000 15.49 0.00 41.91 3.96
756 762 9.460906 GTAGAGGTTAGGTTTATCGTATTTGAG 57.539 37.037 0.00 0.00 0.00 3.02
783 791 2.328051 TCCATTAGGAAAGGCCCCC 58.672 57.895 0.00 0.00 42.23 5.40
869 877 5.068636 ACGGCGTAGATCCTCTATTCTTTA 58.931 41.667 12.58 0.00 30.76 1.85
870 878 5.533903 ACGGCGTAGATCCTCTATTCTTTAA 59.466 40.000 12.58 0.00 30.76 1.52
871 879 5.857517 CGGCGTAGATCCTCTATTCTTTAAC 59.142 44.000 0.00 0.00 30.76 2.01
872 880 6.294065 CGGCGTAGATCCTCTATTCTTTAACT 60.294 42.308 0.00 0.00 30.76 2.24
873 881 6.864165 GGCGTAGATCCTCTATTCTTTAACTG 59.136 42.308 0.00 0.00 30.76 3.16
874 882 7.255520 GGCGTAGATCCTCTATTCTTTAACTGA 60.256 40.741 0.00 0.00 30.76 3.41
875 883 7.592164 GCGTAGATCCTCTATTCTTTAACTGAC 59.408 40.741 0.00 0.00 30.76 3.51
876 884 8.077386 CGTAGATCCTCTATTCTTTAACTGACC 58.923 40.741 0.00 0.00 30.76 4.02
877 885 7.979786 AGATCCTCTATTCTTTAACTGACCA 57.020 36.000 0.00 0.00 0.00 4.02
878 886 8.017418 AGATCCTCTATTCTTTAACTGACCAG 57.983 38.462 0.00 0.00 0.00 4.00
879 887 6.546428 TCCTCTATTCTTTAACTGACCAGG 57.454 41.667 1.82 0.00 0.00 4.45
880 888 6.261435 TCCTCTATTCTTTAACTGACCAGGA 58.739 40.000 0.00 0.00 0.00 3.86
881 889 6.381420 TCCTCTATTCTTTAACTGACCAGGAG 59.619 42.308 0.00 0.00 0.00 3.69
882 890 6.155393 CCTCTATTCTTTAACTGACCAGGAGT 59.845 42.308 0.00 0.00 0.00 3.85
883 891 7.310734 CCTCTATTCTTTAACTGACCAGGAGTT 60.311 40.741 0.00 0.00 37.43 3.01
884 892 8.660295 TCTATTCTTTAACTGACCAGGAGTTA 57.340 34.615 0.00 0.00 35.30 2.24
885 893 8.750298 TCTATTCTTTAACTGACCAGGAGTTAG 58.250 37.037 0.00 0.00 37.25 2.34
886 894 6.742559 TTCTTTAACTGACCAGGAGTTAGT 57.257 37.500 0.00 0.00 46.66 2.24
892 900 5.367945 ACTGACCAGGAGTTAGTTTCAAA 57.632 39.130 0.00 0.00 42.35 2.69
893 901 5.751586 ACTGACCAGGAGTTAGTTTCAAAA 58.248 37.500 0.00 0.00 42.35 2.44
894 902 5.589050 ACTGACCAGGAGTTAGTTTCAAAAC 59.411 40.000 0.00 0.00 42.35 2.43
895 903 5.502079 TGACCAGGAGTTAGTTTCAAAACA 58.498 37.500 8.23 0.00 41.30 2.83
896 904 5.946972 TGACCAGGAGTTAGTTTCAAAACAA 59.053 36.000 8.23 0.00 41.30 2.83
897 905 6.434652 TGACCAGGAGTTAGTTTCAAAACAAA 59.565 34.615 8.23 0.00 41.30 2.83
898 906 7.039644 TGACCAGGAGTTAGTTTCAAAACAAAA 60.040 33.333 8.23 0.01 41.30 2.44
899 907 7.672240 ACCAGGAGTTAGTTTCAAAACAAAAA 58.328 30.769 8.23 0.00 41.30 1.94
966 974 0.943673 CACTTGCATTGGTGTCGTCA 59.056 50.000 0.00 0.00 0.00 4.35
977 985 0.442699 GTGTCGTCAATTCGCCTTCC 59.557 55.000 0.00 0.00 0.00 3.46
978 986 0.320374 TGTCGTCAATTCGCCTTCCT 59.680 50.000 0.00 0.00 0.00 3.36
979 987 1.000145 GTCGTCAATTCGCCTTCCTC 59.000 55.000 0.00 0.00 0.00 3.71
980 988 0.108329 TCGTCAATTCGCCTTCCTCC 60.108 55.000 0.00 0.00 0.00 4.30
981 989 1.421410 CGTCAATTCGCCTTCCTCCG 61.421 60.000 0.00 0.00 0.00 4.63
982 990 1.449601 TCAATTCGCCTTCCTCCGC 60.450 57.895 0.00 0.00 0.00 5.54
983 991 2.124695 AATTCGCCTTCCTCCGCC 60.125 61.111 0.00 0.00 0.00 6.13
984 992 2.670148 AATTCGCCTTCCTCCGCCT 61.670 57.895 0.00 0.00 0.00 5.52
985 993 1.335132 AATTCGCCTTCCTCCGCCTA 61.335 55.000 0.00 0.00 0.00 3.93
986 994 1.335132 ATTCGCCTTCCTCCGCCTAA 61.335 55.000 0.00 0.00 0.00 2.69
987 995 2.202892 CGCCTTCCTCCGCCTAAC 60.203 66.667 0.00 0.00 0.00 2.34
988 996 2.189784 GCCTTCCTCCGCCTAACC 59.810 66.667 0.00 0.00 0.00 2.85
989 997 2.499685 CCTTCCTCCGCCTAACCG 59.500 66.667 0.00 0.00 0.00 4.44
990 998 2.056223 CCTTCCTCCGCCTAACCGA 61.056 63.158 0.00 0.00 0.00 4.69
991 999 1.400530 CCTTCCTCCGCCTAACCGAT 61.401 60.000 0.00 0.00 0.00 4.18
1101 1124 3.438360 CAAGCTCGTGTTTGCTCTTTTT 58.562 40.909 1.13 0.00 38.75 1.94
1102 1125 4.497340 CCAAGCTCGTGTTTGCTCTTTTTA 60.497 41.667 8.35 0.00 38.75 1.52
1103 1126 5.215160 CAAGCTCGTGTTTGCTCTTTTTAT 58.785 37.500 1.13 0.00 38.75 1.40
1104 1127 5.035784 AGCTCGTGTTTGCTCTTTTTATC 57.964 39.130 0.00 0.00 33.90 1.75
1416 1465 3.633418 AGTTATACGGCCTGAAGAGAGT 58.367 45.455 0.00 0.00 0.00 3.24
1429 1478 5.276461 TGAAGAGAGTGTTCTGCAACTTA 57.724 39.130 0.00 0.00 29.60 2.24
1576 1629 8.633075 TTTCTGTGAAATTCAATGAAAGTGAC 57.367 30.769 15.56 0.00 42.58 3.67
1596 1649 0.889994 GGCCATTCATCTGCAACACA 59.110 50.000 0.00 0.00 0.00 3.72
1648 1701 8.548721 GCTGCATACACTTATACTTAAATTCGT 58.451 33.333 0.00 0.00 0.00 3.85
1827 1890 1.448985 AATGATGTTCCGGTTCCACG 58.551 50.000 0.00 0.00 0.00 4.94
1852 2865 8.889000 CGTTTAGCACTTTTAACAGTAATTGAC 58.111 33.333 0.00 0.00 0.00 3.18
1916 2929 3.005155 AGGTTTGATTTTGTGCTGAGCTC 59.995 43.478 6.82 6.82 0.00 4.09
1970 2983 4.800471 CCGCTATTCCTTTCTGCATTTTTC 59.200 41.667 0.00 0.00 0.00 2.29
2077 3090 2.036992 CTGCACACAAAGGTCTCTCTCT 59.963 50.000 0.00 0.00 0.00 3.10
2078 3091 2.036475 TGCACACAAAGGTCTCTCTCTC 59.964 50.000 0.00 0.00 0.00 3.20
2079 3092 2.298729 GCACACAAAGGTCTCTCTCTCT 59.701 50.000 0.00 0.00 0.00 3.10
2080 3093 3.613910 GCACACAAAGGTCTCTCTCTCTC 60.614 52.174 0.00 0.00 0.00 3.20
2081 3094 3.826157 CACACAAAGGTCTCTCTCTCTCT 59.174 47.826 0.00 0.00 0.00 3.10
2082 3095 4.079253 ACACAAAGGTCTCTCTCTCTCTC 58.921 47.826 0.00 0.00 0.00 3.20
2083 3096 4.202567 ACACAAAGGTCTCTCTCTCTCTCT 60.203 45.833 0.00 0.00 0.00 3.10
2084 3097 4.396166 CACAAAGGTCTCTCTCTCTCTCTC 59.604 50.000 0.00 0.00 0.00 3.20
2085 3098 4.042809 ACAAAGGTCTCTCTCTCTCTCTCA 59.957 45.833 0.00 0.00 0.00 3.27
2086 3099 3.914426 AGGTCTCTCTCTCTCTCTCAC 57.086 52.381 0.00 0.00 0.00 3.51
2087 3100 3.454858 AGGTCTCTCTCTCTCTCTCACT 58.545 50.000 0.00 0.00 0.00 3.41
2088 3101 3.452627 AGGTCTCTCTCTCTCTCTCACTC 59.547 52.174 0.00 0.00 0.00 3.51
2089 3102 3.452627 GGTCTCTCTCTCTCTCTCACTCT 59.547 52.174 0.00 0.00 0.00 3.24
2090 3103 4.442192 GGTCTCTCTCTCTCTCTCACTCTC 60.442 54.167 0.00 0.00 0.00 3.20
2110 3123 7.062722 CACTCTCTCATGTACACACACAAATAG 59.937 40.741 0.00 0.00 37.54 1.73
2405 3453 2.501723 GAGGTATGGTCAGGTGTCATGT 59.498 50.000 0.00 0.00 0.00 3.21
2527 3575 5.414789 TTCAAGAGGAATTGACGTGGATA 57.585 39.130 0.00 0.00 38.87 2.59
2649 4908 2.597578 TCTCTGTACACACTGGGCTA 57.402 50.000 0.00 0.00 0.00 3.93
2686 4945 5.831525 AGAAAAATCGGGTTTGTTAAGACCT 59.168 36.000 0.00 0.00 36.18 3.85
2903 5162 7.718272 AATTTCTTTGTGAACATCACCAATG 57.282 32.000 7.94 5.55 46.40 2.82
3028 5287 3.459828 TCTCAACCTTGATGATACCCCA 58.540 45.455 0.00 0.00 36.46 4.96
3122 5381 2.133281 TCCTTCGTGGATCTCCGTTA 57.867 50.000 0.00 0.00 40.56 3.18
3123 5382 2.022195 TCCTTCGTGGATCTCCGTTAG 58.978 52.381 0.00 0.00 40.56 2.34
3124 5383 1.067212 CCTTCGTGGATCTCCGTTAGG 59.933 57.143 0.00 3.94 39.43 2.69
3125 5384 0.458669 TTCGTGGATCTCCGTTAGGC 59.541 55.000 0.00 0.00 39.43 3.93
3126 5385 0.395311 TCGTGGATCTCCGTTAGGCT 60.395 55.000 0.00 0.00 39.43 4.58
3127 5386 1.134007 TCGTGGATCTCCGTTAGGCTA 60.134 52.381 0.00 0.00 39.43 3.93
3128 5387 1.887198 CGTGGATCTCCGTTAGGCTAT 59.113 52.381 0.00 0.00 39.43 2.97
3129 5388 2.351835 CGTGGATCTCCGTTAGGCTATG 60.352 54.545 0.00 0.00 39.43 2.23
3130 5389 2.628657 GTGGATCTCCGTTAGGCTATGT 59.371 50.000 0.00 0.00 39.43 2.29
3131 5390 3.069729 GTGGATCTCCGTTAGGCTATGTT 59.930 47.826 0.00 0.00 39.43 2.71
3132 5391 3.321111 TGGATCTCCGTTAGGCTATGTTC 59.679 47.826 0.00 0.00 39.43 3.18
3133 5392 3.566523 GATCTCCGTTAGGCTATGTTCG 58.433 50.000 0.00 0.00 37.47 3.95
3134 5393 1.679680 TCTCCGTTAGGCTATGTTCGG 59.320 52.381 16.23 16.23 39.40 4.30
3135 5394 1.407979 CTCCGTTAGGCTATGTTCGGT 59.592 52.381 19.32 0.00 39.14 4.69
3136 5395 1.826720 TCCGTTAGGCTATGTTCGGTT 59.173 47.619 19.32 0.00 39.14 4.44
3137 5396 3.023119 TCCGTTAGGCTATGTTCGGTTA 58.977 45.455 19.32 6.58 39.14 2.85
3138 5397 3.446873 TCCGTTAGGCTATGTTCGGTTAA 59.553 43.478 19.32 6.09 39.14 2.01
3139 5398 4.081752 TCCGTTAGGCTATGTTCGGTTAAA 60.082 41.667 19.32 5.85 39.14 1.52
3140 5399 4.033243 CCGTTAGGCTATGTTCGGTTAAAC 59.967 45.833 14.96 0.75 34.38 2.01
3141 5400 4.033243 CGTTAGGCTATGTTCGGTTAAACC 59.967 45.833 0.00 0.00 34.05 3.27
3142 5401 3.994931 AGGCTATGTTCGGTTAAACCT 57.005 42.857 0.00 0.00 35.66 3.50
3143 5402 3.870274 AGGCTATGTTCGGTTAAACCTC 58.130 45.455 0.00 0.00 35.66 3.85
3144 5403 3.518303 AGGCTATGTTCGGTTAAACCTCT 59.482 43.478 0.00 0.00 35.66 3.69
3145 5404 3.869832 GGCTATGTTCGGTTAAACCTCTC 59.130 47.826 0.00 0.00 35.66 3.20
3146 5405 3.869832 GCTATGTTCGGTTAAACCTCTCC 59.130 47.826 0.00 0.00 35.66 3.71
3147 5406 4.382793 GCTATGTTCGGTTAAACCTCTCCT 60.383 45.833 0.00 0.00 35.66 3.69
3148 5407 3.396260 TGTTCGGTTAAACCTCTCCTG 57.604 47.619 0.00 0.00 35.66 3.86
3149 5408 2.038033 TGTTCGGTTAAACCTCTCCTGG 59.962 50.000 0.00 0.00 35.66 4.45
3150 5409 2.301009 GTTCGGTTAAACCTCTCCTGGA 59.699 50.000 0.00 0.00 35.66 3.86
3151 5410 2.176889 TCGGTTAAACCTCTCCTGGAG 58.823 52.381 17.84 17.84 41.51 3.86
3152 5411 2.176889 CGGTTAAACCTCTCCTGGAGA 58.823 52.381 24.27 24.27 44.45 3.71
3161 5420 4.838307 TCCTGGAGAGGATTGGGG 57.162 61.111 0.00 0.00 44.13 4.96
3162 5421 2.114388 TCCTGGAGAGGATTGGGGA 58.886 57.895 0.00 0.00 44.13 4.81
3163 5422 0.030705 TCCTGGAGAGGATTGGGGAG 60.031 60.000 0.00 0.00 44.13 4.30
3164 5423 1.059006 CCTGGAGAGGATTGGGGAGG 61.059 65.000 0.00 0.00 42.93 4.30
3165 5424 0.327000 CTGGAGAGGATTGGGGAGGT 60.327 60.000 0.00 0.00 0.00 3.85
3166 5425 0.121197 TGGAGAGGATTGGGGAGGTT 59.879 55.000 0.00 0.00 0.00 3.50
3167 5426 1.299939 GGAGAGGATTGGGGAGGTTT 58.700 55.000 0.00 0.00 0.00 3.27
3168 5427 1.064389 GGAGAGGATTGGGGAGGTTTG 60.064 57.143 0.00 0.00 0.00 2.93
3169 5428 1.002857 AGAGGATTGGGGAGGTTTGG 58.997 55.000 0.00 0.00 0.00 3.28
3170 5429 0.999712 GAGGATTGGGGAGGTTTGGA 59.000 55.000 0.00 0.00 0.00 3.53
3171 5430 0.704664 AGGATTGGGGAGGTTTGGAC 59.295 55.000 0.00 0.00 0.00 4.02
3172 5431 0.679960 GGATTGGGGAGGTTTGGACG 60.680 60.000 0.00 0.00 0.00 4.79
3173 5432 0.679960 GATTGGGGAGGTTTGGACGG 60.680 60.000 0.00 0.00 0.00 4.79
3174 5433 2.150014 ATTGGGGAGGTTTGGACGGG 62.150 60.000 0.00 0.00 0.00 5.28
3175 5434 2.931649 GGGGAGGTTTGGACGGGA 60.932 66.667 0.00 0.00 0.00 5.14
3176 5435 2.306384 GGGGAGGTTTGGACGGGAT 61.306 63.158 0.00 0.00 0.00 3.85
3177 5436 1.689412 GGGAGGTTTGGACGGGATT 59.311 57.895 0.00 0.00 0.00 3.01
3178 5437 0.679960 GGGAGGTTTGGACGGGATTG 60.680 60.000 0.00 0.00 0.00 2.67
3179 5438 0.326927 GGAGGTTTGGACGGGATTGA 59.673 55.000 0.00 0.00 0.00 2.57
3180 5439 1.450025 GAGGTTTGGACGGGATTGAC 58.550 55.000 0.00 0.00 0.00 3.18
3181 5440 0.321298 AGGTTTGGACGGGATTGACG 60.321 55.000 0.00 0.00 37.36 4.35
3183 5442 0.515564 GTTTGGACGGGATTGACGTG 59.484 55.000 0.00 0.00 45.68 4.49
3184 5443 0.604243 TTTGGACGGGATTGACGTGG 60.604 55.000 0.00 0.00 45.68 4.94
3185 5444 1.473497 TTGGACGGGATTGACGTGGA 61.473 55.000 0.00 0.00 45.68 4.02
3186 5445 1.261938 TGGACGGGATTGACGTGGAT 61.262 55.000 0.00 0.00 45.68 3.41
3187 5446 0.107848 GGACGGGATTGACGTGGATT 60.108 55.000 0.00 0.00 45.68 3.01
3188 5447 1.677820 GGACGGGATTGACGTGGATTT 60.678 52.381 0.00 0.00 45.68 2.17
3189 5448 2.081462 GACGGGATTGACGTGGATTTT 58.919 47.619 0.00 0.00 45.68 1.82
3190 5449 3.264104 GACGGGATTGACGTGGATTTTA 58.736 45.455 0.00 0.00 45.68 1.52
3191 5450 3.267483 ACGGGATTGACGTGGATTTTAG 58.733 45.455 0.00 0.00 43.78 1.85
3192 5451 2.031683 CGGGATTGACGTGGATTTTAGC 59.968 50.000 0.00 0.00 0.00 3.09
3193 5452 3.279434 GGGATTGACGTGGATTTTAGCT 58.721 45.455 0.00 0.00 0.00 3.32
3194 5453 3.694566 GGGATTGACGTGGATTTTAGCTT 59.305 43.478 0.00 0.00 0.00 3.74
3195 5454 4.879545 GGGATTGACGTGGATTTTAGCTTA 59.120 41.667 0.00 0.00 0.00 3.09
3196 5455 5.007724 GGGATTGACGTGGATTTTAGCTTAG 59.992 44.000 0.00 0.00 0.00 2.18
3197 5456 4.939509 TTGACGTGGATTTTAGCTTAGC 57.060 40.909 0.00 0.00 0.00 3.09
3198 5457 2.927477 TGACGTGGATTTTAGCTTAGCG 59.073 45.455 0.00 0.00 0.00 4.26
3199 5458 2.277084 ACGTGGATTTTAGCTTAGCGG 58.723 47.619 0.00 0.00 0.00 5.52
3200 5459 1.597663 CGTGGATTTTAGCTTAGCGGG 59.402 52.381 0.00 0.00 0.00 6.13
3201 5460 1.947456 GTGGATTTTAGCTTAGCGGGG 59.053 52.381 0.00 0.00 0.00 5.73
3202 5461 1.841277 TGGATTTTAGCTTAGCGGGGA 59.159 47.619 0.00 0.00 0.00 4.81
3203 5462 2.240160 TGGATTTTAGCTTAGCGGGGAA 59.760 45.455 0.00 0.00 0.00 3.97
3204 5463 3.117663 TGGATTTTAGCTTAGCGGGGAAT 60.118 43.478 0.00 0.00 0.00 3.01
3205 5464 3.253432 GGATTTTAGCTTAGCGGGGAATG 59.747 47.826 0.00 0.00 0.00 2.67
3206 5465 3.637911 TTTTAGCTTAGCGGGGAATGA 57.362 42.857 0.00 0.00 0.00 2.57
3207 5466 3.637911 TTTAGCTTAGCGGGGAATGAA 57.362 42.857 0.00 0.00 0.00 2.57
3208 5467 3.857157 TTAGCTTAGCGGGGAATGAAT 57.143 42.857 0.00 0.00 0.00 2.57
3209 5468 2.262423 AGCTTAGCGGGGAATGAATC 57.738 50.000 0.00 0.00 0.00 2.52
3220 5479 2.881734 GGAATGAATCCTCCCCAATCC 58.118 52.381 0.00 0.00 45.56 3.01
3221 5480 2.177669 GGAATGAATCCTCCCCAATCCA 59.822 50.000 0.00 0.00 45.56 3.41
3222 5481 3.225940 GAATGAATCCTCCCCAATCCAC 58.774 50.000 0.00 0.00 0.00 4.02
3223 5482 1.985622 TGAATCCTCCCCAATCCACT 58.014 50.000 0.00 0.00 0.00 4.00
3224 5483 1.846439 TGAATCCTCCCCAATCCACTC 59.154 52.381 0.00 0.00 0.00 3.51
3225 5484 1.143889 GAATCCTCCCCAATCCACTCC 59.856 57.143 0.00 0.00 0.00 3.85
3226 5485 0.046242 ATCCTCCCCAATCCACTCCA 59.954 55.000 0.00 0.00 0.00 3.86
3227 5486 0.178846 TCCTCCCCAATCCACTCCAA 60.179 55.000 0.00 0.00 0.00 3.53
3228 5487 0.929244 CCTCCCCAATCCACTCCAAT 59.071 55.000 0.00 0.00 0.00 3.16
3229 5488 1.133668 CCTCCCCAATCCACTCCAATC 60.134 57.143 0.00 0.00 0.00 2.67
3230 5489 0.926293 TCCCCAATCCACTCCAATCC 59.074 55.000 0.00 0.00 0.00 3.01
3231 5490 0.929244 CCCCAATCCACTCCAATCCT 59.071 55.000 0.00 0.00 0.00 3.24
3232 5491 1.133668 CCCCAATCCACTCCAATCCTC 60.134 57.143 0.00 0.00 0.00 3.71
3233 5492 1.849039 CCCAATCCACTCCAATCCTCT 59.151 52.381 0.00 0.00 0.00 3.69
3234 5493 2.243221 CCCAATCCACTCCAATCCTCTT 59.757 50.000 0.00 0.00 0.00 2.85
3235 5494 3.549794 CCAATCCACTCCAATCCTCTTC 58.450 50.000 0.00 0.00 0.00 2.87
3236 5495 3.054139 CCAATCCACTCCAATCCTCTTCA 60.054 47.826 0.00 0.00 0.00 3.02
3237 5496 4.568380 CCAATCCACTCCAATCCTCTTCAA 60.568 45.833 0.00 0.00 0.00 2.69
3238 5497 4.934797 ATCCACTCCAATCCTCTTCAAA 57.065 40.909 0.00 0.00 0.00 2.69
3239 5498 4.722526 TCCACTCCAATCCTCTTCAAAA 57.277 40.909 0.00 0.00 0.00 2.44
3240 5499 4.398319 TCCACTCCAATCCTCTTCAAAAC 58.602 43.478 0.00 0.00 0.00 2.43
3241 5500 4.104738 TCCACTCCAATCCTCTTCAAAACT 59.895 41.667 0.00 0.00 0.00 2.66
3242 5501 4.457257 CCACTCCAATCCTCTTCAAAACTC 59.543 45.833 0.00 0.00 0.00 3.01
3243 5502 5.065914 CACTCCAATCCTCTTCAAAACTCA 58.934 41.667 0.00 0.00 0.00 3.41
3244 5503 5.709164 CACTCCAATCCTCTTCAAAACTCAT 59.291 40.000 0.00 0.00 0.00 2.90
3245 5504 5.709164 ACTCCAATCCTCTTCAAAACTCATG 59.291 40.000 0.00 0.00 0.00 3.07
3246 5505 4.460382 TCCAATCCTCTTCAAAACTCATGC 59.540 41.667 0.00 0.00 0.00 4.06
3247 5506 4.219070 CCAATCCTCTTCAAAACTCATGCA 59.781 41.667 0.00 0.00 0.00 3.96
3248 5507 5.279106 CCAATCCTCTTCAAAACTCATGCAA 60.279 40.000 0.00 0.00 0.00 4.08
3249 5508 4.836125 TCCTCTTCAAAACTCATGCAAC 57.164 40.909 0.00 0.00 0.00 4.17
3250 5509 3.569701 TCCTCTTCAAAACTCATGCAACC 59.430 43.478 0.00 0.00 0.00 3.77
3251 5510 3.558505 CTCTTCAAAACTCATGCAACCG 58.441 45.455 0.00 0.00 0.00 4.44
3252 5511 3.210227 TCTTCAAAACTCATGCAACCGA 58.790 40.909 0.00 0.00 0.00 4.69
3253 5512 3.629855 TCTTCAAAACTCATGCAACCGAA 59.370 39.130 0.00 0.00 0.00 4.30
3254 5513 3.347958 TCAAAACTCATGCAACCGAAC 57.652 42.857 0.00 0.00 0.00 3.95
3255 5514 2.685388 TCAAAACTCATGCAACCGAACA 59.315 40.909 0.00 0.00 0.00 3.18
3256 5515 3.129462 TCAAAACTCATGCAACCGAACAA 59.871 39.130 0.00 0.00 0.00 2.83
3257 5516 3.354089 AAACTCATGCAACCGAACAAG 57.646 42.857 0.00 0.00 0.00 3.16
3258 5517 0.593128 ACTCATGCAACCGAACAAGC 59.407 50.000 0.00 0.00 0.00 4.01
3259 5518 0.109597 CTCATGCAACCGAACAAGCC 60.110 55.000 0.00 0.00 0.00 4.35
3260 5519 1.080569 CATGCAACCGAACAAGCCC 60.081 57.895 0.00 0.00 0.00 5.19
3261 5520 1.228552 ATGCAACCGAACAAGCCCT 60.229 52.632 0.00 0.00 0.00 5.19
3262 5521 0.827507 ATGCAACCGAACAAGCCCTT 60.828 50.000 0.00 0.00 0.00 3.95
3303 5562 8.571336 GGACAATTTTATCCCATCATGAGTAAG 58.429 37.037 0.09 0.00 0.00 2.34
3317 5576 9.764870 CATCATGAGTAAGTTGTCTTTGTATTG 57.235 33.333 0.09 0.00 35.36 1.90
3550 5812 5.316770 GCTCTACTTTTCATGCGTACTTTG 58.683 41.667 0.00 0.00 0.00 2.77
3566 5832 6.595794 CGTACTTTGTGTTGGTATTTACCTG 58.404 40.000 8.19 0.00 46.58 4.00
3567 5833 6.424509 CGTACTTTGTGTTGGTATTTACCTGA 59.575 38.462 8.19 0.00 46.58 3.86
3568 5834 7.118680 CGTACTTTGTGTTGGTATTTACCTGAT 59.881 37.037 8.19 0.00 46.58 2.90
3569 5835 7.448748 ACTTTGTGTTGGTATTTACCTGATC 57.551 36.000 8.19 0.00 46.58 2.92
3645 5911 7.095397 CCCCCATTTGTTCTTTTCGTAAATTTC 60.095 37.037 0.00 0.00 0.00 2.17
3764 6030 1.133668 GGTGAGGGCATCAGGCTATTT 60.134 52.381 0.25 0.00 44.01 1.40
3778 6044 7.031226 TCAGGCTATTTCATAATTGCTTCAC 57.969 36.000 0.00 0.00 40.73 3.18
3835 6101 6.645700 TTGTTTGAAATGTGCTGAGTTTTC 57.354 33.333 0.00 0.00 0.00 2.29
3846 6112 6.623486 TGTGCTGAGTTTTCAATCATATTGG 58.377 36.000 0.12 0.00 31.69 3.16
3970 6236 1.457267 TTGCTGCTTCCCAAGGCAA 60.457 52.632 0.00 0.00 39.99 4.52
4110 6376 8.247562 GTGTCTCTTTCTATGATCACTTGTAGT 58.752 37.037 0.00 0.00 0.00 2.73
4163 6429 3.008704 TGCCATCAGCTCACTATGCATAT 59.991 43.478 6.92 0.00 44.23 1.78
4372 6640 5.316167 AGATTTCAAGGCATGTGACAGTTA 58.684 37.500 0.00 0.00 0.00 2.24
4373 6641 5.769662 AGATTTCAAGGCATGTGACAGTTAA 59.230 36.000 0.00 0.00 0.00 2.01
4381 6649 4.559153 GCATGTGACAGTTAAAAGGCATT 58.441 39.130 0.00 0.00 0.00 3.56
4382 6650 5.336372 GGCATGTGACAGTTAAAAGGCATTA 60.336 40.000 0.00 0.00 0.00 1.90
4383 6651 6.155827 GCATGTGACAGTTAAAAGGCATTAA 58.844 36.000 0.00 0.00 0.00 1.40
4423 6719 3.248888 AGGAGTAAAACCACACCTAGCT 58.751 45.455 0.00 0.00 37.69 3.32
4491 6787 6.097915 TCTTTAGGCCCTCAAATATACTCG 57.902 41.667 0.00 0.00 0.00 4.18
4492 6788 5.836898 TCTTTAGGCCCTCAAATATACTCGA 59.163 40.000 0.00 0.00 0.00 4.04
4493 6789 6.325545 TCTTTAGGCCCTCAAATATACTCGAA 59.674 38.462 0.00 0.00 0.00 3.71
4494 6790 4.338379 AGGCCCTCAAATATACTCGAAC 57.662 45.455 0.00 0.00 0.00 3.95
4495 6791 3.057734 GGCCCTCAAATATACTCGAACG 58.942 50.000 0.00 0.00 0.00 3.95
4496 6792 3.057734 GCCCTCAAATATACTCGAACGG 58.942 50.000 0.00 0.00 0.00 4.44
4497 6793 3.057734 CCCTCAAATATACTCGAACGGC 58.942 50.000 0.00 0.00 0.00 5.68
4498 6794 3.491964 CCCTCAAATATACTCGAACGGCA 60.492 47.826 0.00 0.00 0.00 5.69
4901 7197 4.681978 GACGCCGGTGTTGCCTCT 62.682 66.667 23.85 0.00 34.25 3.69
4914 7210 3.314331 CCTCTGGCGTCCACCTGT 61.314 66.667 0.00 0.00 0.00 4.00
4962 7260 2.606213 TGATCCACCCGCCAGTCA 60.606 61.111 0.00 0.00 0.00 3.41
5003 7301 2.203070 CGCTGCCGCCTTTATCCT 60.203 61.111 0.00 0.00 0.00 3.24
5045 7343 4.037923 AGACATGCTTCGTTTGTTCCAAAT 59.962 37.500 0.00 0.00 0.00 2.32
5081 7379 2.025155 ACGGAGATGATGTAGAACGCT 58.975 47.619 0.00 0.00 0.00 5.07
5119 7417 0.025001 CGTCGTTATTGCGCCAAGAG 59.975 55.000 4.18 0.00 0.00 2.85
5169 7467 1.131303 TGTCATCACCCGGGGAGTTT 61.131 55.000 27.92 0.00 0.00 2.66
5212 7510 2.266055 GCCGTCTACTGCCTTGCT 59.734 61.111 0.00 0.00 0.00 3.91
5344 7648 5.362987 TTTCATTACGTGTTGTTTTTGCG 57.637 34.783 0.00 0.00 0.00 4.85
5367 7671 6.980397 GCGATCAAATTCAACCCAGAATATTT 59.020 34.615 0.00 0.00 37.24 1.40
5368 7672 8.134895 GCGATCAAATTCAACCCAGAATATTTA 58.865 33.333 0.00 0.00 37.24 1.40
5389 7693 7.618019 TTTATGCATAGGGTAGATGAAGAGT 57.382 36.000 6.50 0.00 0.00 3.24
5632 7954 1.791103 CGTGGTTTTGGATGCACCGT 61.791 55.000 0.00 0.00 42.61 4.83
5744 8066 2.415168 CCATTAATGAAGTGTGTCGCGT 59.585 45.455 17.23 0.00 0.00 6.01
5751 8073 0.179121 AAGTGTGTCGCGTCTGTTCA 60.179 50.000 5.77 0.00 0.00 3.18
5864 8191 1.422781 GAGCCATGATTGAGATGGGGA 59.577 52.381 0.00 0.00 40.80 4.81
6060 10009 1.822990 CTTGAGGCAGTTGCATTGGAT 59.177 47.619 6.43 0.00 44.36 3.41
6156 10433 4.588528 TCACTATTTGGAAGGCTTTTTGCT 59.411 37.500 0.00 0.00 42.39 3.91
6157 10434 4.687483 CACTATTTGGAAGGCTTTTTGCTG 59.313 41.667 0.00 0.00 42.39 4.41
6158 10435 4.588528 ACTATTTGGAAGGCTTTTTGCTGA 59.411 37.500 0.00 0.00 42.39 4.26
6159 10436 3.902881 TTTGGAAGGCTTTTTGCTGAA 57.097 38.095 0.00 0.00 42.39 3.02
6160 10437 3.457610 TTGGAAGGCTTTTTGCTGAAG 57.542 42.857 0.00 0.00 42.39 3.02
6161 10438 1.688197 TGGAAGGCTTTTTGCTGAAGG 59.312 47.619 0.00 0.00 42.39 3.46
6162 10439 1.001293 GGAAGGCTTTTTGCTGAAGGG 59.999 52.381 0.00 0.00 42.39 3.95
6163 10440 1.001293 GAAGGCTTTTTGCTGAAGGGG 59.999 52.381 0.00 0.00 42.39 4.79
6164 10441 0.188342 AGGCTTTTTGCTGAAGGGGA 59.812 50.000 0.00 0.00 42.39 4.81
6165 10442 0.605083 GGCTTTTTGCTGAAGGGGAG 59.395 55.000 0.00 0.00 42.39 4.30
6166 10443 0.037882 GCTTTTTGCTGAAGGGGAGC 60.038 55.000 0.00 0.00 38.95 4.70
6167 10444 0.605083 CTTTTTGCTGAAGGGGAGCC 59.395 55.000 0.00 0.00 35.43 4.70
6168 10445 0.188342 TTTTTGCTGAAGGGGAGCCT 59.812 50.000 0.00 0.00 35.43 4.58
6169 10446 0.188342 TTTTGCTGAAGGGGAGCCTT 59.812 50.000 0.00 0.00 35.43 4.35
6170 10447 0.540365 TTTGCTGAAGGGGAGCCTTG 60.540 55.000 0.00 0.00 35.43 3.61
6171 10448 2.044551 GCTGAAGGGGAGCCTTGG 60.045 66.667 0.00 0.00 0.00 3.61
6172 10449 2.044551 CTGAAGGGGAGCCTTGGC 60.045 66.667 2.97 2.97 0.00 4.52
6173 10450 3.984193 CTGAAGGGGAGCCTTGGCG 62.984 68.421 5.95 0.00 0.00 5.69
6181 10458 3.605749 GAGCCTTGGCGCAGTGGTA 62.606 63.158 10.83 0.00 0.00 3.25
6182 10459 2.671619 GCCTTGGCGCAGTGGTAA 60.672 61.111 10.83 0.00 0.00 2.85
6183 10460 2.265182 GCCTTGGCGCAGTGGTAAA 61.265 57.895 10.83 0.00 0.00 2.01
6184 10461 1.875963 CCTTGGCGCAGTGGTAAAG 59.124 57.895 10.83 0.71 0.00 1.85
6185 10462 1.210155 CTTGGCGCAGTGGTAAAGC 59.790 57.895 10.83 0.00 0.00 3.51
6186 10463 1.228124 TTGGCGCAGTGGTAAAGCT 60.228 52.632 10.83 0.00 0.00 3.74
6187 10464 0.035598 TTGGCGCAGTGGTAAAGCTA 59.964 50.000 10.83 0.00 0.00 3.32
6188 10465 0.672401 TGGCGCAGTGGTAAAGCTAC 60.672 55.000 10.83 0.00 0.00 3.58
6189 10466 0.391263 GGCGCAGTGGTAAAGCTACT 60.391 55.000 10.83 0.00 39.65 2.57
6193 10470 2.770164 CAGTGGTAAAGCTACTGCCT 57.230 50.000 0.78 0.00 46.88 4.75
6194 10471 3.059352 CAGTGGTAAAGCTACTGCCTT 57.941 47.619 0.78 0.00 46.88 4.35
6195 10472 2.744202 CAGTGGTAAAGCTACTGCCTTG 59.256 50.000 0.78 0.00 46.88 3.61
6196 10473 2.372172 AGTGGTAAAGCTACTGCCTTGT 59.628 45.455 4.78 0.00 37.53 3.16
6197 10474 2.484264 GTGGTAAAGCTACTGCCTTGTG 59.516 50.000 4.78 0.00 40.80 3.33
6198 10475 2.370519 TGGTAAAGCTACTGCCTTGTGA 59.629 45.455 4.78 0.00 40.80 3.58
6199 10476 2.742589 GGTAAAGCTACTGCCTTGTGAC 59.257 50.000 0.00 0.00 40.80 3.67
6200 10477 1.897560 AAAGCTACTGCCTTGTGACC 58.102 50.000 0.00 0.00 40.80 4.02
6201 10478 0.764890 AAGCTACTGCCTTGTGACCA 59.235 50.000 0.00 0.00 40.80 4.02
6202 10479 0.987294 AGCTACTGCCTTGTGACCAT 59.013 50.000 0.00 0.00 40.80 3.55
6203 10480 1.089920 GCTACTGCCTTGTGACCATG 58.910 55.000 0.00 0.00 0.00 3.66
6204 10481 1.339055 GCTACTGCCTTGTGACCATGA 60.339 52.381 0.00 0.00 0.00 3.07
6205 10482 2.625737 CTACTGCCTTGTGACCATGAG 58.374 52.381 0.00 0.00 0.00 2.90
6206 10483 0.037303 ACTGCCTTGTGACCATGAGG 59.963 55.000 0.00 0.00 42.21 3.86
6221 10498 2.859165 TGAGGTCATGGGTTCAAGTC 57.141 50.000 0.00 0.00 0.00 3.01
6222 10499 1.351017 TGAGGTCATGGGTTCAAGTCC 59.649 52.381 0.00 0.00 0.00 3.85
6223 10500 1.630878 GAGGTCATGGGTTCAAGTCCT 59.369 52.381 0.00 0.00 0.00 3.85
6224 10501 1.352352 AGGTCATGGGTTCAAGTCCTG 59.648 52.381 0.00 0.00 0.00 3.86
6225 10502 1.614317 GGTCATGGGTTCAAGTCCTGG 60.614 57.143 0.00 0.00 0.00 4.45
6226 10503 1.351017 GTCATGGGTTCAAGTCCTGGA 59.649 52.381 0.00 0.00 0.00 3.86
6227 10504 2.061848 TCATGGGTTCAAGTCCTGGAA 58.938 47.619 0.00 0.00 0.00 3.53
6228 10505 2.445145 TCATGGGTTCAAGTCCTGGAAA 59.555 45.455 0.00 0.00 0.00 3.13
6229 10506 2.358322 TGGGTTCAAGTCCTGGAAAC 57.642 50.000 0.00 0.00 0.00 2.78
6230 10507 1.566703 TGGGTTCAAGTCCTGGAAACA 59.433 47.619 0.00 0.00 32.36 2.83
6244 10521 4.431416 TGGAAACAGCCTCTTACAGAAA 57.569 40.909 0.00 0.00 35.01 2.52
6245 10522 4.985538 TGGAAACAGCCTCTTACAGAAAT 58.014 39.130 0.00 0.00 35.01 2.17
6246 10523 4.761739 TGGAAACAGCCTCTTACAGAAATG 59.238 41.667 0.00 0.00 35.01 2.32
6247 10524 4.762251 GGAAACAGCCTCTTACAGAAATGT 59.238 41.667 0.00 0.00 0.00 2.71
6248 10525 5.938125 GGAAACAGCCTCTTACAGAAATGTA 59.062 40.000 0.00 0.00 0.00 2.29
6249 10526 6.092807 GGAAACAGCCTCTTACAGAAATGTAG 59.907 42.308 0.00 0.00 0.00 2.74
6250 10527 5.091261 ACAGCCTCTTACAGAAATGTAGG 57.909 43.478 0.00 0.00 0.00 3.18
6251 10528 4.080863 ACAGCCTCTTACAGAAATGTAGGG 60.081 45.833 0.00 0.66 0.00 3.53
6252 10529 4.162320 CAGCCTCTTACAGAAATGTAGGGA 59.838 45.833 0.00 0.00 0.00 4.20
6253 10530 4.783227 AGCCTCTTACAGAAATGTAGGGAA 59.217 41.667 0.00 0.00 0.00 3.97
6254 10531 5.250774 AGCCTCTTACAGAAATGTAGGGAAA 59.749 40.000 0.00 0.00 0.00 3.13
6255 10532 5.586643 GCCTCTTACAGAAATGTAGGGAAAG 59.413 44.000 0.00 0.00 0.00 2.62
6256 10533 6.116126 CCTCTTACAGAAATGTAGGGAAAGG 58.884 44.000 0.00 0.00 0.00 3.11
6257 10534 5.497474 TCTTACAGAAATGTAGGGAAAGGC 58.503 41.667 0.00 0.00 0.00 4.35
6258 10535 5.250774 TCTTACAGAAATGTAGGGAAAGGCT 59.749 40.000 0.00 0.00 0.00 4.58
6259 10536 3.690460 ACAGAAATGTAGGGAAAGGCTG 58.310 45.455 0.00 0.00 0.00 4.85
6260 10537 2.424956 CAGAAATGTAGGGAAAGGCTGC 59.575 50.000 0.00 0.00 0.00 5.25
6261 10538 1.401905 GAAATGTAGGGAAAGGCTGCG 59.598 52.381 0.00 0.00 0.00 5.18
6262 10539 0.328258 AATGTAGGGAAAGGCTGCGT 59.672 50.000 0.00 0.00 0.00 5.24
6263 10540 1.200519 ATGTAGGGAAAGGCTGCGTA 58.799 50.000 0.00 0.00 0.00 4.42
6264 10541 0.248289 TGTAGGGAAAGGCTGCGTAC 59.752 55.000 0.00 0.00 37.28 3.67
6265 10542 0.535797 GTAGGGAAAGGCTGCGTACT 59.464 55.000 0.00 0.00 34.81 2.73
6266 10543 1.753073 GTAGGGAAAGGCTGCGTACTA 59.247 52.381 0.00 0.00 34.81 1.82
6267 10544 1.497161 AGGGAAAGGCTGCGTACTAT 58.503 50.000 0.00 0.00 0.00 2.12
6268 10545 2.674420 AGGGAAAGGCTGCGTACTATA 58.326 47.619 0.00 0.00 0.00 1.31
6269 10546 2.628657 AGGGAAAGGCTGCGTACTATAG 59.371 50.000 0.00 0.00 0.00 1.31
6270 10547 2.626743 GGGAAAGGCTGCGTACTATAGA 59.373 50.000 6.78 0.00 0.00 1.98
6271 10548 3.552478 GGGAAAGGCTGCGTACTATAGAC 60.552 52.174 6.78 0.00 0.00 2.59
6272 10549 3.552478 GGAAAGGCTGCGTACTATAGACC 60.552 52.174 6.78 0.00 0.00 3.85
6273 10550 1.618487 AGGCTGCGTACTATAGACCC 58.382 55.000 6.78 0.00 0.00 4.46
6274 10551 1.133575 AGGCTGCGTACTATAGACCCA 60.134 52.381 6.78 0.00 0.00 4.51
6275 10552 1.684983 GGCTGCGTACTATAGACCCAA 59.315 52.381 6.78 0.00 0.00 4.12
6276 10553 2.101917 GGCTGCGTACTATAGACCCAAA 59.898 50.000 6.78 0.00 0.00 3.28
6277 10554 3.381949 GCTGCGTACTATAGACCCAAAG 58.618 50.000 6.78 0.00 0.00 2.77
6278 10555 3.181478 GCTGCGTACTATAGACCCAAAGT 60.181 47.826 6.78 0.00 0.00 2.66
6279 10556 4.360563 CTGCGTACTATAGACCCAAAGTG 58.639 47.826 6.78 0.00 0.00 3.16
6280 10557 3.131577 TGCGTACTATAGACCCAAAGTGG 59.868 47.826 6.78 0.00 37.25 4.00
6281 10558 3.131755 GCGTACTATAGACCCAAAGTGGT 59.868 47.826 6.78 0.00 42.79 4.16
6286 10563 4.373771 GACCCAAAGTGGTCGGAC 57.626 61.111 0.00 0.00 44.98 4.79
6287 10564 1.302271 GACCCAAAGTGGTCGGACC 60.302 63.158 20.36 20.36 44.98 4.46
6288 10565 2.033602 CCCAAAGTGGTCGGACCC 59.966 66.667 23.81 14.91 37.50 4.46
6289 10566 2.526046 CCCAAAGTGGTCGGACCCT 61.526 63.158 23.81 16.82 37.50 4.34
6290 10567 1.454539 CCAAAGTGGTCGGACCCTT 59.545 57.895 23.81 21.08 37.50 3.95
6291 10568 0.605589 CCAAAGTGGTCGGACCCTTC 60.606 60.000 23.81 13.97 37.50 3.46
6292 10569 0.605589 CAAAGTGGTCGGACCCTTCC 60.606 60.000 23.81 9.51 37.50 3.46
6293 10570 1.775934 AAAGTGGTCGGACCCTTCCC 61.776 60.000 23.81 7.17 38.99 3.97
6294 10571 2.606826 GTGGTCGGACCCTTCCCT 60.607 66.667 23.81 0.00 38.99 4.20
6295 10572 2.606519 TGGTCGGACCCTTCCCTG 60.607 66.667 23.81 0.00 38.99 4.45
6296 10573 3.400054 GGTCGGACCCTTCCCTGG 61.400 72.222 16.55 0.00 38.99 4.45
6297 10574 2.284405 GTCGGACCCTTCCCTGGA 60.284 66.667 0.00 0.00 38.99 3.86
6298 10575 2.284405 TCGGACCCTTCCCTGGAC 60.284 66.667 0.00 0.00 38.99 4.02
6299 10576 3.400054 CGGACCCTTCCCTGGACC 61.400 72.222 0.00 0.00 38.99 4.46
6300 10577 3.015753 GGACCCTTCCCTGGACCC 61.016 72.222 0.00 0.00 35.57 4.46
6301 10578 2.125225 GACCCTTCCCTGGACCCT 59.875 66.667 0.00 0.00 0.00 4.34
6302 10579 2.204151 ACCCTTCCCTGGACCCTG 60.204 66.667 0.00 0.00 0.00 4.45
6303 10580 3.732849 CCCTTCCCTGGACCCTGC 61.733 72.222 0.00 0.00 0.00 4.85
6304 10581 4.101448 CCTTCCCTGGACCCTGCG 62.101 72.222 0.00 0.00 0.00 5.18
6305 10582 4.785453 CTTCCCTGGACCCTGCGC 62.785 72.222 0.00 0.00 0.00 6.09
6330 10607 3.558674 GAGCTACATGCACCAGGTT 57.441 52.632 0.00 0.00 45.94 3.50
6331 10608 1.089920 GAGCTACATGCACCAGGTTG 58.910 55.000 0.00 0.00 45.94 3.77
6332 10609 0.962356 AGCTACATGCACCAGGTTGC 60.962 55.000 8.03 8.03 44.17 4.17
6333 10610 1.937546 GCTACATGCACCAGGTTGCC 61.938 60.000 10.46 0.00 39.88 4.52
6334 10611 1.304052 TACATGCACCAGGTTGCCC 60.304 57.895 10.46 0.00 42.25 5.36
6429 10709 3.072944 GCAGATGGCATCTATCTTCCAC 58.927 50.000 28.39 8.11 43.97 4.02
6677 10993 0.620556 ATCCTGTTGAGCCGGAACAT 59.379 50.000 5.05 0.00 32.96 2.71
6803 11137 4.096833 TGATTGTTGTGCTTCTATCATGCC 59.903 41.667 0.00 0.00 0.00 4.40
6807 11141 2.923121 TGTGCTTCTATCATGCCCTTC 58.077 47.619 0.00 0.00 0.00 3.46
6837 11173 1.068541 GGACCCTTGCGTGTTTGAATC 60.069 52.381 0.00 0.00 0.00 2.52
6980 11329 9.444600 AAAACTTAGAAGAATTGGCGATAGTTA 57.555 29.630 0.00 0.00 39.35 2.24
7019 11368 3.381335 TCTAAGGGTTCGGCTAGGAATT 58.619 45.455 0.00 0.00 0.00 2.17
7052 11401 5.931441 AGCGGATCAAATATAAAGAGTGC 57.069 39.130 0.00 0.00 0.00 4.40
7061 11410 7.564793 TCAAATATAAAGAGTGCAAGGAGCTA 58.435 34.615 0.00 0.00 45.94 3.32
7471 11829 4.404640 GTGGGGCTAAATTATAAGGGACC 58.595 47.826 0.00 0.00 0.00 4.46
7501 11859 0.394899 GCCCTGAGTGAAATGGAGGG 60.395 60.000 0.00 0.00 45.59 4.30
7513 11871 8.753497 AGTGAAATGGAGGGAGAATTATTTAC 57.247 34.615 0.00 0.00 0.00 2.01
7559 11918 3.882102 TGCCATATGCTTATCCTTGGT 57.118 42.857 0.00 0.00 42.00 3.67
7560 11919 4.991789 TGCCATATGCTTATCCTTGGTA 57.008 40.909 0.00 0.00 42.00 3.25
7561 11920 5.317600 TGCCATATGCTTATCCTTGGTAA 57.682 39.130 0.00 0.00 42.00 2.85
7562 11921 5.891198 TGCCATATGCTTATCCTTGGTAAT 58.109 37.500 0.00 0.00 42.00 1.89
7563 11922 5.711506 TGCCATATGCTTATCCTTGGTAATG 59.288 40.000 0.00 0.00 42.00 1.90
7564 11923 5.945784 GCCATATGCTTATCCTTGGTAATGA 59.054 40.000 0.00 0.00 36.87 2.57
7565 11924 6.434028 GCCATATGCTTATCCTTGGTAATGAA 59.566 38.462 0.00 0.00 36.87 2.57
7566 11925 7.123247 GCCATATGCTTATCCTTGGTAATGAAT 59.877 37.037 0.00 0.00 36.87 2.57
7833 15925 9.612066 ATTTCTTGAAGGCTGTTTGATTAAAAA 57.388 25.926 0.00 0.00 0.00 1.94
7872 15965 2.586425 ACTTGCTTGAAGGCTGCTTTA 58.414 42.857 0.00 0.00 35.78 1.85
7874 15967 3.575687 ACTTGCTTGAAGGCTGCTTTAAT 59.424 39.130 0.00 0.00 35.78 1.40
7875 15968 4.766891 ACTTGCTTGAAGGCTGCTTTAATA 59.233 37.500 0.00 0.00 35.78 0.98
8094 16196 1.269517 TGTTGCGCTTGGAAAATGGAC 60.270 47.619 9.73 0.00 0.00 4.02
8203 16305 4.268522 CGTCTGAAGGTAACAAAACAACG 58.731 43.478 0.00 0.00 41.41 4.10
8245 16347 5.195001 TGTACGATCATGGAATTCATCGA 57.805 39.130 24.44 11.28 40.48 3.59
8372 16474 1.202582 CGTGTTCTCCTAGTCCTGTGG 59.797 57.143 0.00 0.00 0.00 4.17
8378 16480 5.202004 GTTCTCCTAGTCCTGTGGAAGATA 58.798 45.833 0.00 0.00 31.38 1.98
8513 16682 4.160329 ACTCTAGTTGAATGTGAGGTGGA 58.840 43.478 0.00 0.00 0.00 4.02
8527 16739 3.455910 TGAGGTGGATTCTGGTTCCATAG 59.544 47.826 0.00 0.00 44.75 2.23
8655 16871 5.278463 GGAAGCAACTGCAATGAAGACTTAA 60.278 40.000 4.22 0.00 45.16 1.85
8710 16933 1.634702 GCTCTCTTGTTGCTAGGTCG 58.365 55.000 0.00 0.00 0.00 4.79
8735 16958 3.819564 TCAGGATATCCCAGTTGTTCG 57.180 47.619 18.56 0.00 37.41 3.95
8744 16967 2.069273 CCCAGTTGTTCGCTACTTCTG 58.931 52.381 0.00 0.00 31.07 3.02
8751 16974 4.530710 TGTTCGCTACTTCTGTGGTATT 57.469 40.909 0.00 0.00 0.00 1.89
8854 17077 7.168302 CGATGGATGTGTATCTAGTTTCAGTTC 59.832 40.741 0.00 0.00 33.68 3.01
8872 17096 6.397272 TCAGTTCAAAGTCAACAAAATGCTT 58.603 32.000 0.00 0.00 0.00 3.91
8994 17222 3.184541 CACATAGGTAGCGTACACAACC 58.815 50.000 0.00 0.00 0.00 3.77
9005 17234 2.282407 GTACACAACCAAACGACCAGT 58.718 47.619 0.00 0.00 0.00 4.00
9025 17277 6.436218 ACCAGTCACACAGTATAAGACATACA 59.564 38.462 0.00 0.00 0.00 2.29
9092 17372 1.440893 AGCACGCAGGCTCAGATAG 59.559 57.895 0.00 0.00 41.05 2.08
9095 17375 0.678395 CACGCAGGCTCAGATAGGAT 59.322 55.000 0.00 0.00 0.00 3.24
9130 17412 2.964803 GCCACCCTTCCCTAAGAGGTAT 60.965 54.545 0.00 0.00 35.64 2.73
9134 17416 3.275228 ACCCTTCCCTAAGAGGTATCAGT 59.725 47.826 0.00 0.00 35.64 3.41
9147 17432 0.179076 TATCAGTAGGCGACGACGGA 60.179 55.000 6.83 6.83 43.25 4.69
9264 17549 6.252869 GCAAGAACAAGATGCATTTGTAGATG 59.747 38.462 20.25 18.55 37.77 2.90
9273 17558 4.503910 TGCATTTGTAGATGACGTTAGCT 58.496 39.130 2.91 2.91 0.00 3.32
9392 17677 1.381872 ATCCCTGGACCGAGGACAG 60.382 63.158 10.58 4.04 34.69 3.51
9396 17681 1.323412 CCTGGACCGAGGACAGATAG 58.677 60.000 15.99 1.64 34.69 2.08
9430 17715 3.327404 GAGAGCGGGGGTCCCAAA 61.327 66.667 10.98 0.00 45.83 3.28
9501 17786 2.936993 GCACCGGAAGAACACATGATCT 60.937 50.000 9.46 0.00 0.00 2.75
9515 17800 0.690744 TGATCTGCATCTTCCGGGGA 60.691 55.000 0.00 0.16 0.00 4.81
9525 17810 3.190738 TTCCGGGGAGCCACACAAG 62.191 63.158 0.00 0.00 0.00 3.16
9585 17870 0.178068 TGATGGAAGTAGGAAGGCGC 59.822 55.000 0.00 0.00 0.00 6.53
9652 17937 4.715523 CCTTCCAAAGCCCCGCGA 62.716 66.667 8.23 0.00 0.00 5.87
9653 17938 2.438434 CTTCCAAAGCCCCGCGAT 60.438 61.111 8.23 0.00 0.00 4.58
9654 17939 1.153249 CTTCCAAAGCCCCGCGATA 60.153 57.895 8.23 0.00 0.00 2.92
9655 17940 1.153249 TTCCAAAGCCCCGCGATAG 60.153 57.895 8.23 0.00 0.00 2.08
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
67 68 6.543430 AAAATCCATTAACTATGCAGGCAA 57.457 33.333 0.00 0.00 32.60 4.52
336 339 2.594303 CCCGCTTCCAAGTGCACA 60.594 61.111 21.04 0.00 35.25 4.57
385 388 2.048503 GACGAGGTGGTTCGGGTG 60.049 66.667 0.00 0.00 44.57 4.61
778 786 3.072330 TGATTTTCTTTCCTTTTGGGGGC 59.928 43.478 0.00 0.00 40.87 5.80
869 877 5.367945 TTGAAACTAACTCCTGGTCAGTT 57.632 39.130 6.12 6.12 37.80 3.16
870 878 5.367945 TTTGAAACTAACTCCTGGTCAGT 57.632 39.130 0.00 0.00 0.00 3.41
871 879 5.588648 TGTTTTGAAACTAACTCCTGGTCAG 59.411 40.000 7.97 0.00 39.59 3.51
872 880 5.502079 TGTTTTGAAACTAACTCCTGGTCA 58.498 37.500 7.97 0.00 39.59 4.02
873 881 6.445357 TTGTTTTGAAACTAACTCCTGGTC 57.555 37.500 7.97 0.00 39.59 4.02
874 882 6.844097 TTTGTTTTGAAACTAACTCCTGGT 57.156 33.333 7.97 0.00 39.59 4.00
915 923 2.807108 GCGAGACTCCTGGTCAGTTTTT 60.807 50.000 0.00 0.00 46.72 1.94
916 924 1.270358 GCGAGACTCCTGGTCAGTTTT 60.270 52.381 0.00 0.00 46.72 2.43
917 925 0.318762 GCGAGACTCCTGGTCAGTTT 59.681 55.000 0.00 0.00 46.72 2.66
960 968 1.000145 GAGGAAGGCGAATTGACGAC 59.000 55.000 0.00 0.00 42.10 4.34
966 974 1.335132 TAGGCGGAGGAAGGCGAATT 61.335 55.000 0.00 0.00 39.33 2.17
977 985 0.109689 GATCGATCGGTTAGGCGGAG 60.110 60.000 16.41 0.00 0.00 4.63
978 986 1.848932 CGATCGATCGGTTAGGCGGA 61.849 60.000 34.54 0.00 45.93 5.54
979 987 1.442184 CGATCGATCGGTTAGGCGG 60.442 63.158 34.54 8.20 45.93 6.13
980 988 4.132426 CGATCGATCGGTTAGGCG 57.868 61.111 34.54 11.81 45.93 5.52
989 997 1.707632 CTTCTCCATGGCGATCGATC 58.292 55.000 21.57 15.68 0.00 3.69
990 998 0.320247 GCTTCTCCATGGCGATCGAT 60.320 55.000 21.57 0.00 0.00 3.59
991 999 1.068083 GCTTCTCCATGGCGATCGA 59.932 57.895 21.57 0.00 0.00 3.59
1101 1124 3.118884 GCAGACCAACGAACCCTAAGATA 60.119 47.826 0.00 0.00 0.00 1.98
1102 1125 2.354805 GCAGACCAACGAACCCTAAGAT 60.355 50.000 0.00 0.00 0.00 2.40
1103 1126 1.001633 GCAGACCAACGAACCCTAAGA 59.998 52.381 0.00 0.00 0.00 2.10
1104 1127 1.439679 GCAGACCAACGAACCCTAAG 58.560 55.000 0.00 0.00 0.00 2.18
1465 1514 8.533569 AAAAGAAGAAACCCATAGAAAGAACA 57.466 30.769 0.00 0.00 0.00 3.18
1466 1515 9.464714 GAAAAAGAAGAAACCCATAGAAAGAAC 57.535 33.333 0.00 0.00 0.00 3.01
1576 1629 0.179156 GTGTTGCAGATGAATGGCCG 60.179 55.000 0.00 0.00 0.00 6.13
1596 1649 4.947388 ACGATAACCAACAATATGCCAAGT 59.053 37.500 0.00 0.00 0.00 3.16
1669 1722 6.714810 TGCTGGTATAAATGTCCCATGAATAC 59.285 38.462 0.00 0.00 0.00 1.89
1670 1723 6.846988 TGCTGGTATAAATGTCCCATGAATA 58.153 36.000 0.00 0.00 0.00 1.75
1706 1765 8.726988 GTGCAAGAGACACCTATACATTAAAAA 58.273 33.333 0.00 0.00 31.67 1.94
1827 1890 9.177304 GGTCAATTACTGTTAAAAGTGCTAAAC 57.823 33.333 8.66 1.98 0.00 2.01
1852 2865 1.094785 CTTTATGGACAAGGCACGGG 58.905 55.000 0.00 0.00 0.00 5.28
1916 2929 5.359860 ACCTGTAAGAAAAACAAAGACCAGG 59.640 40.000 0.00 0.00 41.13 4.45
1979 2992 4.100529 CAAGAAGATATTTTGCAGCCACG 58.899 43.478 0.00 0.00 0.00 4.94
2077 3090 5.182487 GTGTACATGAGAGAGTGAGAGAGA 58.818 45.833 0.00 0.00 0.00 3.10
2078 3091 4.940654 TGTGTACATGAGAGAGTGAGAGAG 59.059 45.833 0.00 0.00 0.00 3.20
2079 3092 4.697828 GTGTGTACATGAGAGAGTGAGAGA 59.302 45.833 0.00 0.00 0.00 3.10
2080 3093 4.457257 TGTGTGTACATGAGAGAGTGAGAG 59.543 45.833 0.00 0.00 0.00 3.20
2081 3094 4.216472 GTGTGTGTACATGAGAGAGTGAGA 59.784 45.833 0.00 0.00 39.39 3.27
2082 3095 4.022849 TGTGTGTGTACATGAGAGAGTGAG 60.023 45.833 0.00 0.00 39.39 3.51
2083 3096 3.888930 TGTGTGTGTACATGAGAGAGTGA 59.111 43.478 0.00 0.00 39.39 3.41
2084 3097 4.243007 TGTGTGTGTACATGAGAGAGTG 57.757 45.455 0.00 0.00 39.39 3.51
2085 3098 4.937201 TTGTGTGTGTACATGAGAGAGT 57.063 40.909 0.00 0.00 39.39 3.24
2086 3099 7.093354 ACTATTTGTGTGTGTACATGAGAGAG 58.907 38.462 0.00 0.00 39.39 3.20
2087 3100 6.993079 ACTATTTGTGTGTGTACATGAGAGA 58.007 36.000 0.00 0.00 39.39 3.10
2088 3101 8.932945 ATACTATTTGTGTGTGTACATGAGAG 57.067 34.615 0.00 0.00 39.39 3.20
2205 3226 3.646715 CCGGGGCCACTCCTGAAA 61.647 66.667 1.96 0.00 35.18 2.69
2246 3267 2.307934 ACATTTGCGCCTGTTTTGTT 57.692 40.000 4.18 0.00 0.00 2.83
2251 3272 3.658757 AACAATACATTTGCGCCTGTT 57.341 38.095 4.18 0.00 0.00 3.16
2252 3273 3.658757 AAACAATACATTTGCGCCTGT 57.341 38.095 4.18 8.83 0.00 4.00
2405 3453 9.729023 CAACATTTAACTTGTCTTTCACACATA 57.271 29.630 0.00 0.00 33.41 2.29
2460 3508 9.618890 CCTTGATGTTCTGGAGAAGAAATTATA 57.381 33.333 0.00 0.00 46.51 0.98
2629 4888 1.944177 AGCCCAGTGTGTACAGAGAT 58.056 50.000 0.00 0.00 0.00 2.75
2649 4908 7.726216 ACCCGATTTTTCTTCTTCTTTTGAAT 58.274 30.769 0.00 0.00 37.85 2.57
2686 4945 9.051679 CGTCAATGGGATGTATACATTCTTAAA 57.948 33.333 21.11 7.68 36.57 1.52
2738 4997 4.751098 TGTACCAAAGTAAAAGTAGCCACG 59.249 41.667 0.00 0.00 0.00 4.94
3122 5381 3.518303 AGAGGTTTAACCGAACATAGCCT 59.482 43.478 8.63 0.00 44.90 4.58
3123 5382 3.869832 GAGAGGTTTAACCGAACATAGCC 59.130 47.826 8.63 0.00 44.90 3.93
3124 5383 3.869832 GGAGAGGTTTAACCGAACATAGC 59.130 47.826 8.63 0.00 44.90 2.97
3125 5384 5.109903 CAGGAGAGGTTTAACCGAACATAG 58.890 45.833 8.63 0.00 44.90 2.23
3126 5385 4.081309 CCAGGAGAGGTTTAACCGAACATA 60.081 45.833 8.63 0.00 44.90 2.29
3127 5386 3.307480 CCAGGAGAGGTTTAACCGAACAT 60.307 47.826 8.63 0.00 44.90 2.71
3128 5387 2.038033 CCAGGAGAGGTTTAACCGAACA 59.962 50.000 8.63 0.00 44.90 3.18
3129 5388 2.301009 TCCAGGAGAGGTTTAACCGAAC 59.699 50.000 8.63 4.88 44.90 3.95
3130 5389 2.565834 CTCCAGGAGAGGTTTAACCGAA 59.434 50.000 11.62 0.00 44.90 4.30
3131 5390 2.176889 CTCCAGGAGAGGTTTAACCGA 58.823 52.381 11.62 0.00 44.90 4.69
3132 5391 2.176889 TCTCCAGGAGAGGTTTAACCG 58.823 52.381 15.98 0.00 44.90 4.44
3145 5404 1.059006 CCTCCCCAATCCTCTCCAGG 61.059 65.000 0.00 0.00 42.01 4.45
3146 5405 0.327000 ACCTCCCCAATCCTCTCCAG 60.327 60.000 0.00 0.00 0.00 3.86
3147 5406 0.121197 AACCTCCCCAATCCTCTCCA 59.879 55.000 0.00 0.00 0.00 3.86
3148 5407 1.064389 CAAACCTCCCCAATCCTCTCC 60.064 57.143 0.00 0.00 0.00 3.71
3149 5408 1.064389 CCAAACCTCCCCAATCCTCTC 60.064 57.143 0.00 0.00 0.00 3.20
3150 5409 1.002857 CCAAACCTCCCCAATCCTCT 58.997 55.000 0.00 0.00 0.00 3.69
3151 5410 0.999712 TCCAAACCTCCCCAATCCTC 59.000 55.000 0.00 0.00 0.00 3.71
3152 5411 0.704664 GTCCAAACCTCCCCAATCCT 59.295 55.000 0.00 0.00 0.00 3.24
3153 5412 0.679960 CGTCCAAACCTCCCCAATCC 60.680 60.000 0.00 0.00 0.00 3.01
3154 5413 0.679960 CCGTCCAAACCTCCCCAATC 60.680 60.000 0.00 0.00 0.00 2.67
3155 5414 1.382629 CCGTCCAAACCTCCCCAAT 59.617 57.895 0.00 0.00 0.00 3.16
3156 5415 2.836187 CCCGTCCAAACCTCCCCAA 61.836 63.158 0.00 0.00 0.00 4.12
3157 5416 3.253838 CCCGTCCAAACCTCCCCA 61.254 66.667 0.00 0.00 0.00 4.96
3158 5417 1.859841 AATCCCGTCCAAACCTCCCC 61.860 60.000 0.00 0.00 0.00 4.81
3159 5418 0.679960 CAATCCCGTCCAAACCTCCC 60.680 60.000 0.00 0.00 0.00 4.30
3160 5419 0.326927 TCAATCCCGTCCAAACCTCC 59.673 55.000 0.00 0.00 0.00 4.30
3161 5420 1.450025 GTCAATCCCGTCCAAACCTC 58.550 55.000 0.00 0.00 0.00 3.85
3162 5421 0.321298 CGTCAATCCCGTCCAAACCT 60.321 55.000 0.00 0.00 0.00 3.50
3163 5422 0.604511 ACGTCAATCCCGTCCAAACC 60.605 55.000 0.00 0.00 31.97 3.27
3164 5423 0.515564 CACGTCAATCCCGTCCAAAC 59.484 55.000 0.00 0.00 36.17 2.93
3165 5424 0.604243 CCACGTCAATCCCGTCCAAA 60.604 55.000 0.00 0.00 36.17 3.28
3166 5425 1.004320 CCACGTCAATCCCGTCCAA 60.004 57.895 0.00 0.00 36.17 3.53
3167 5426 1.261938 ATCCACGTCAATCCCGTCCA 61.262 55.000 0.00 0.00 36.17 4.02
3168 5427 0.107848 AATCCACGTCAATCCCGTCC 60.108 55.000 0.00 0.00 36.17 4.79
3169 5428 1.734163 AAATCCACGTCAATCCCGTC 58.266 50.000 0.00 0.00 36.17 4.79
3170 5429 2.194201 AAAATCCACGTCAATCCCGT 57.806 45.000 0.00 0.00 39.52 5.28
3171 5430 2.031683 GCTAAAATCCACGTCAATCCCG 59.968 50.000 0.00 0.00 0.00 5.14
3172 5431 3.279434 AGCTAAAATCCACGTCAATCCC 58.721 45.455 0.00 0.00 0.00 3.85
3173 5432 4.965119 AAGCTAAAATCCACGTCAATCC 57.035 40.909 0.00 0.00 0.00 3.01
3174 5433 5.502606 GCTAAGCTAAAATCCACGTCAATC 58.497 41.667 0.00 0.00 0.00 2.67
3175 5434 4.034048 CGCTAAGCTAAAATCCACGTCAAT 59.966 41.667 0.00 0.00 0.00 2.57
3176 5435 3.369756 CGCTAAGCTAAAATCCACGTCAA 59.630 43.478 0.00 0.00 0.00 3.18
3177 5436 2.927477 CGCTAAGCTAAAATCCACGTCA 59.073 45.455 0.00 0.00 0.00 4.35
3178 5437 2.284417 CCGCTAAGCTAAAATCCACGTC 59.716 50.000 0.00 0.00 0.00 4.34
3179 5438 2.277084 CCGCTAAGCTAAAATCCACGT 58.723 47.619 0.00 0.00 0.00 4.49
3180 5439 1.597663 CCCGCTAAGCTAAAATCCACG 59.402 52.381 0.00 0.00 0.00 4.94
3181 5440 1.947456 CCCCGCTAAGCTAAAATCCAC 59.053 52.381 0.00 0.00 0.00 4.02
3182 5441 1.841277 TCCCCGCTAAGCTAAAATCCA 59.159 47.619 0.00 0.00 0.00 3.41
3183 5442 2.632987 TCCCCGCTAAGCTAAAATCC 57.367 50.000 0.00 0.00 0.00 3.01
3184 5443 4.134563 TCATTCCCCGCTAAGCTAAAATC 58.865 43.478 0.00 0.00 0.00 2.17
3185 5444 4.164843 TCATTCCCCGCTAAGCTAAAAT 57.835 40.909 0.00 0.00 0.00 1.82
3186 5445 3.637911 TCATTCCCCGCTAAGCTAAAA 57.362 42.857 0.00 0.00 0.00 1.52
3187 5446 3.637911 TTCATTCCCCGCTAAGCTAAA 57.362 42.857 0.00 0.00 0.00 1.85
3188 5447 3.496160 GGATTCATTCCCCGCTAAGCTAA 60.496 47.826 0.00 0.00 38.75 3.09
3189 5448 2.038557 GGATTCATTCCCCGCTAAGCTA 59.961 50.000 0.00 0.00 38.75 3.32
3190 5449 1.202818 GGATTCATTCCCCGCTAAGCT 60.203 52.381 0.00 0.00 38.75 3.74
3191 5450 1.202818 AGGATTCATTCCCCGCTAAGC 60.203 52.381 0.00 0.00 46.81 3.09
3192 5451 2.551071 GGAGGATTCATTCCCCGCTAAG 60.551 54.545 0.00 0.00 46.81 2.18
3193 5452 1.420138 GGAGGATTCATTCCCCGCTAA 59.580 52.381 0.00 0.00 46.81 3.09
3194 5453 1.056660 GGAGGATTCATTCCCCGCTA 58.943 55.000 0.00 0.00 46.81 4.26
3195 5454 1.709994 GGGAGGATTCATTCCCCGCT 61.710 60.000 12.35 0.00 46.81 5.52
3196 5455 1.228276 GGGAGGATTCATTCCCCGC 60.228 63.158 12.35 0.00 46.81 6.13
3200 5459 2.177669 TGGATTGGGGAGGATTCATTCC 59.822 50.000 0.00 0.00 45.85 3.01
3201 5460 3.117360 AGTGGATTGGGGAGGATTCATTC 60.117 47.826 0.00 0.00 0.00 2.67
3202 5461 2.861317 AGTGGATTGGGGAGGATTCATT 59.139 45.455 0.00 0.00 0.00 2.57
3203 5462 2.444766 GAGTGGATTGGGGAGGATTCAT 59.555 50.000 0.00 0.00 0.00 2.57
3204 5463 1.846439 GAGTGGATTGGGGAGGATTCA 59.154 52.381 0.00 0.00 0.00 2.57
3205 5464 1.143889 GGAGTGGATTGGGGAGGATTC 59.856 57.143 0.00 0.00 0.00 2.52
3206 5465 1.226311 GGAGTGGATTGGGGAGGATT 58.774 55.000 0.00 0.00 0.00 3.01
3207 5466 0.046242 TGGAGTGGATTGGGGAGGAT 59.954 55.000 0.00 0.00 0.00 3.24
3208 5467 0.178846 TTGGAGTGGATTGGGGAGGA 60.179 55.000 0.00 0.00 0.00 3.71
3209 5468 0.929244 ATTGGAGTGGATTGGGGAGG 59.071 55.000 0.00 0.00 0.00 4.30
3210 5469 1.133668 GGATTGGAGTGGATTGGGGAG 60.134 57.143 0.00 0.00 0.00 4.30
3211 5470 0.926293 GGATTGGAGTGGATTGGGGA 59.074 55.000 0.00 0.00 0.00 4.81
3212 5471 0.929244 AGGATTGGAGTGGATTGGGG 59.071 55.000 0.00 0.00 0.00 4.96
3213 5472 1.849039 AGAGGATTGGAGTGGATTGGG 59.151 52.381 0.00 0.00 0.00 4.12
3214 5473 3.054139 TGAAGAGGATTGGAGTGGATTGG 60.054 47.826 0.00 0.00 0.00 3.16
3215 5474 4.226427 TGAAGAGGATTGGAGTGGATTG 57.774 45.455 0.00 0.00 0.00 2.67
3216 5475 4.934797 TTGAAGAGGATTGGAGTGGATT 57.065 40.909 0.00 0.00 0.00 3.01
3217 5476 4.934797 TTTGAAGAGGATTGGAGTGGAT 57.065 40.909 0.00 0.00 0.00 3.41
3218 5477 4.104738 AGTTTTGAAGAGGATTGGAGTGGA 59.895 41.667 0.00 0.00 0.00 4.02
3219 5478 4.401925 AGTTTTGAAGAGGATTGGAGTGG 58.598 43.478 0.00 0.00 0.00 4.00
3220 5479 5.065914 TGAGTTTTGAAGAGGATTGGAGTG 58.934 41.667 0.00 0.00 0.00 3.51
3221 5480 5.310409 TGAGTTTTGAAGAGGATTGGAGT 57.690 39.130 0.00 0.00 0.00 3.85
3222 5481 5.392811 GCATGAGTTTTGAAGAGGATTGGAG 60.393 44.000 0.00 0.00 0.00 3.86
3223 5482 4.460382 GCATGAGTTTTGAAGAGGATTGGA 59.540 41.667 0.00 0.00 0.00 3.53
3224 5483 4.219070 TGCATGAGTTTTGAAGAGGATTGG 59.781 41.667 0.00 0.00 0.00 3.16
3225 5484 5.381174 TGCATGAGTTTTGAAGAGGATTG 57.619 39.130 0.00 0.00 0.00 2.67
3226 5485 5.279156 GGTTGCATGAGTTTTGAAGAGGATT 60.279 40.000 0.00 0.00 0.00 3.01
3227 5486 4.219288 GGTTGCATGAGTTTTGAAGAGGAT 59.781 41.667 0.00 0.00 0.00 3.24
3228 5487 3.569701 GGTTGCATGAGTTTTGAAGAGGA 59.430 43.478 0.00 0.00 0.00 3.71
3229 5488 3.610114 CGGTTGCATGAGTTTTGAAGAGG 60.610 47.826 0.00 0.00 0.00 3.69
3230 5489 3.250762 TCGGTTGCATGAGTTTTGAAGAG 59.749 43.478 0.00 0.00 0.00 2.85
3231 5490 3.210227 TCGGTTGCATGAGTTTTGAAGA 58.790 40.909 0.00 0.00 0.00 2.87
3232 5491 3.624326 TCGGTTGCATGAGTTTTGAAG 57.376 42.857 0.00 0.00 0.00 3.02
3233 5492 3.129462 TGTTCGGTTGCATGAGTTTTGAA 59.871 39.130 0.00 0.00 0.00 2.69
3234 5493 2.685388 TGTTCGGTTGCATGAGTTTTGA 59.315 40.909 0.00 0.00 0.00 2.69
3235 5494 3.077229 TGTTCGGTTGCATGAGTTTTG 57.923 42.857 0.00 0.00 0.00 2.44
3236 5495 3.705604 CTTGTTCGGTTGCATGAGTTTT 58.294 40.909 0.00 0.00 0.00 2.43
3237 5496 2.543653 GCTTGTTCGGTTGCATGAGTTT 60.544 45.455 0.00 0.00 0.00 2.66
3238 5497 1.001378 GCTTGTTCGGTTGCATGAGTT 60.001 47.619 0.00 0.00 0.00 3.01
3239 5498 0.593128 GCTTGTTCGGTTGCATGAGT 59.407 50.000 0.00 0.00 0.00 3.41
3240 5499 0.109597 GGCTTGTTCGGTTGCATGAG 60.110 55.000 0.00 0.00 0.00 2.90
3241 5500 1.523154 GGGCTTGTTCGGTTGCATGA 61.523 55.000 0.00 0.00 0.00 3.07
3242 5501 1.080569 GGGCTTGTTCGGTTGCATG 60.081 57.895 0.00 0.00 0.00 4.06
3243 5502 0.827507 AAGGGCTTGTTCGGTTGCAT 60.828 50.000 0.00 0.00 0.00 3.96
3244 5503 0.179015 TAAGGGCTTGTTCGGTTGCA 60.179 50.000 0.00 0.00 0.00 4.08
3245 5504 0.955905 TTAAGGGCTTGTTCGGTTGC 59.044 50.000 0.00 0.00 0.00 4.17
3246 5505 2.031157 CACTTAAGGGCTTGTTCGGTTG 60.031 50.000 7.53 0.00 0.00 3.77
3247 5506 2.227194 CACTTAAGGGCTTGTTCGGTT 58.773 47.619 7.53 0.00 0.00 4.44
3248 5507 1.142262 ACACTTAAGGGCTTGTTCGGT 59.858 47.619 4.12 0.00 0.00 4.69
3249 5508 1.892209 ACACTTAAGGGCTTGTTCGG 58.108 50.000 4.12 0.00 0.00 4.30
3250 5509 4.935808 AGAATACACTTAAGGGCTTGTTCG 59.064 41.667 4.12 0.00 0.00 3.95
3251 5510 5.705905 ACAGAATACACTTAAGGGCTTGTTC 59.294 40.000 4.12 4.46 0.00 3.18
3252 5511 5.631119 ACAGAATACACTTAAGGGCTTGTT 58.369 37.500 4.12 0.00 0.00 2.83
3253 5512 5.242795 ACAGAATACACTTAAGGGCTTGT 57.757 39.130 4.12 3.12 0.00 3.16
3254 5513 5.817816 CCTACAGAATACACTTAAGGGCTTG 59.182 44.000 4.12 0.00 0.00 4.01
3255 5514 5.724854 TCCTACAGAATACACTTAAGGGCTT 59.275 40.000 4.12 0.00 0.00 4.35
3256 5515 5.128991 GTCCTACAGAATACACTTAAGGGCT 59.871 44.000 4.12 0.00 0.00 5.19
3257 5516 5.105064 TGTCCTACAGAATACACTTAAGGGC 60.105 44.000 4.12 0.00 0.00 5.19
3258 5517 6.540438 TGTCCTACAGAATACACTTAAGGG 57.460 41.667 2.27 2.27 0.00 3.95
3259 5518 9.449719 AAATTGTCCTACAGAATACACTTAAGG 57.550 33.333 7.53 0.00 0.00 2.69
3303 5562 5.570589 GCTTGAGATGCAATACAAAGACAAC 59.429 40.000 0.00 0.00 35.59 3.32
3317 5576 2.935201 CCTGAGTTAGTGCTTGAGATGC 59.065 50.000 0.00 0.00 0.00 3.91
3359 5621 4.790962 ACATCAGCGCCAGCCTGG 62.791 66.667 6.32 6.32 46.67 4.45
3566 5832 6.879993 TCATAGAGGACCAATAGTAGTCGATC 59.120 42.308 0.00 0.00 33.66 3.69
3567 5833 6.780901 TCATAGAGGACCAATAGTAGTCGAT 58.219 40.000 0.00 0.00 33.66 3.59
3568 5834 6.183810 TCATAGAGGACCAATAGTAGTCGA 57.816 41.667 0.00 0.00 33.66 4.20
3569 5835 6.489127 CTCATAGAGGACCAATAGTAGTCG 57.511 45.833 0.00 0.00 33.66 4.18
3835 6101 9.923786 CAAACAATTTACATGCCAATATGATTG 57.076 29.630 0.00 0.00 31.41 2.67
4211 6477 6.260700 TGCATGTCATTTAGTAGGGGTATT 57.739 37.500 0.00 0.00 0.00 1.89
4214 6480 4.018415 ACTTGCATGTCATTTAGTAGGGGT 60.018 41.667 0.00 0.00 0.00 4.95
4245 6511 7.870509 TTGAATGAGATTAAGTGCTAGCAAT 57.129 32.000 21.29 17.01 0.00 3.56
4246 6512 7.686438 TTTGAATGAGATTAAGTGCTAGCAA 57.314 32.000 21.29 3.68 0.00 3.91
4327 6595 7.994425 TCTCTGCTTAAAATAATTGTCCACA 57.006 32.000 0.00 0.00 0.00 4.17
4401 6697 3.651423 AGCTAGGTGTGGTTTTACTCCTT 59.349 43.478 5.03 0.00 40.61 3.36
4423 6719 4.142004 GGAGTTAAGCCGGATAAGAGTTCA 60.142 45.833 5.05 0.00 0.00 3.18
4869 7165 2.877691 GTCAATGCGGTTGGAGCC 59.122 61.111 2.32 0.00 38.39 4.70
4870 7166 2.480555 CGTCAATGCGGTTGGAGC 59.519 61.111 2.32 0.00 38.39 4.70
4871 7167 2.480555 GCGTCAATGCGGTTGGAG 59.519 61.111 2.32 0.00 38.39 3.86
4872 7168 3.053291 GGCGTCAATGCGGTTGGA 61.053 61.111 2.32 0.00 38.39 3.53
4873 7169 4.459331 CGGCGTCAATGCGGTTGG 62.459 66.667 0.00 0.00 38.39 3.77
4874 7170 4.459331 CCGGCGTCAATGCGGTTG 62.459 66.667 6.01 0.00 39.25 3.77
4901 7197 3.702048 GCCTACAGGTGGACGCCA 61.702 66.667 4.54 0.00 37.57 5.69
4914 7210 4.715130 AGGGTGTCAGCGGGCCTA 62.715 66.667 0.84 0.00 0.00 3.93
4962 7260 4.011023 CGGAGATATCTGTCTATTCCGGT 58.989 47.826 10.74 0.00 32.51 5.28
5045 7343 4.508128 GTCATCCGCCGGCTTCGA 62.508 66.667 26.68 17.29 35.61 3.71
5081 7379 1.600636 CCACAAAGCTCCTCGGCAA 60.601 57.895 0.00 0.00 34.17 4.52
5119 7417 0.109504 TTGCCTACAAAAATCGCCGC 60.110 50.000 0.00 0.00 31.21 6.53
5127 7425 1.227883 TCGCCGGTTGCCTACAAAA 60.228 52.632 1.90 0.00 37.58 2.44
5169 7467 3.969250 GACGGCGGGCCTCAAATCA 62.969 63.158 13.24 0.00 0.00 2.57
5208 7506 1.122632 TAGGGGTGGACGACAAGCAA 61.123 55.000 0.00 0.00 0.00 3.91
5212 7510 0.834687 AAGCTAGGGGTGGACGACAA 60.835 55.000 0.00 0.00 0.00 3.18
5367 7671 7.290014 TCAAACTCTTCATCTACCCTATGCATA 59.710 37.037 6.20 6.20 0.00 3.14
5368 7672 6.100279 TCAAACTCTTCATCTACCCTATGCAT 59.900 38.462 3.79 3.79 0.00 3.96
5369 7673 5.425217 TCAAACTCTTCATCTACCCTATGCA 59.575 40.000 0.00 0.00 0.00 3.96
5389 7693 2.536066 TCGAAGACCATCTCCCTCAAA 58.464 47.619 0.00 0.00 0.00 2.69
5632 7954 2.106338 TGCAATGGTGAGGAAGAGACAA 59.894 45.455 0.00 0.00 0.00 3.18
5744 8066 5.185454 CCCATATGTAAGCACTTGAACAGA 58.815 41.667 1.24 0.00 0.00 3.41
5751 8073 4.016444 CCAACACCCATATGTAAGCACTT 58.984 43.478 1.24 0.00 30.75 3.16
5826 8148 3.485877 GGCTCGTGTGTATCTTTGAATGC 60.486 47.826 0.00 0.00 0.00 3.56
5864 8191 1.203313 TGGGAGCCCTCAAGTACTCTT 60.203 52.381 7.16 0.00 36.94 2.85
6060 10009 7.464273 AGTATGAATGCCAAATCCATAGATCA 58.536 34.615 0.00 0.00 0.00 2.92
6163 10440 3.605749 TACCACTGCGCCAAGGCTC 62.606 63.158 4.18 1.20 39.32 4.70
6164 10441 2.690653 TTTACCACTGCGCCAAGGCT 62.691 55.000 4.18 0.00 39.32 4.58
6165 10442 2.200170 CTTTACCACTGCGCCAAGGC 62.200 60.000 4.18 0.00 37.85 4.35
6166 10443 1.875963 CTTTACCACTGCGCCAAGG 59.124 57.895 4.18 6.21 0.00 3.61
6167 10444 1.210155 GCTTTACCACTGCGCCAAG 59.790 57.895 4.18 0.00 0.00 3.61
6168 10445 0.035598 TAGCTTTACCACTGCGCCAA 59.964 50.000 4.18 0.00 0.00 4.52
6169 10446 0.672401 GTAGCTTTACCACTGCGCCA 60.672 55.000 4.18 0.00 0.00 5.69
6170 10447 0.391263 AGTAGCTTTACCACTGCGCC 60.391 55.000 4.18 0.00 0.00 6.53
6171 10448 0.721718 CAGTAGCTTTACCACTGCGC 59.278 55.000 0.00 0.00 33.86 6.09
6174 10451 2.744202 CAAGGCAGTAGCTTTACCACTG 59.256 50.000 8.89 8.89 38.07 3.66
6175 10452 2.372172 ACAAGGCAGTAGCTTTACCACT 59.628 45.455 0.00 0.00 38.07 4.00
6176 10453 2.484264 CACAAGGCAGTAGCTTTACCAC 59.516 50.000 0.00 0.00 38.07 4.16
6177 10454 2.370519 TCACAAGGCAGTAGCTTTACCA 59.629 45.455 0.00 0.00 38.07 3.25
6178 10455 2.742589 GTCACAAGGCAGTAGCTTTACC 59.257 50.000 0.00 0.00 38.07 2.85
6179 10456 2.742589 GGTCACAAGGCAGTAGCTTTAC 59.257 50.000 0.00 0.00 38.07 2.01
6180 10457 2.370519 TGGTCACAAGGCAGTAGCTTTA 59.629 45.455 0.00 0.00 38.07 1.85
6181 10458 1.142870 TGGTCACAAGGCAGTAGCTTT 59.857 47.619 0.00 0.00 41.17 3.51
6182 10459 0.764890 TGGTCACAAGGCAGTAGCTT 59.235 50.000 0.00 0.00 41.70 3.74
6183 10460 0.987294 ATGGTCACAAGGCAGTAGCT 59.013 50.000 0.00 0.00 41.70 3.32
6184 10461 1.089920 CATGGTCACAAGGCAGTAGC 58.910 55.000 0.00 0.00 41.10 3.58
6185 10462 2.625737 CTCATGGTCACAAGGCAGTAG 58.374 52.381 0.00 0.00 0.00 2.57
6186 10463 1.278985 CCTCATGGTCACAAGGCAGTA 59.721 52.381 0.00 0.00 0.00 2.74
6187 10464 0.037303 CCTCATGGTCACAAGGCAGT 59.963 55.000 0.00 0.00 0.00 4.40
6188 10465 0.037303 ACCTCATGGTCACAAGGCAG 59.963 55.000 0.00 0.00 44.78 4.85
6189 10466 2.154139 ACCTCATGGTCACAAGGCA 58.846 52.632 0.00 0.00 44.78 4.75
6201 10478 2.025887 GGACTTGAACCCATGACCTCAT 60.026 50.000 0.00 0.00 36.96 2.90
6202 10479 1.351017 GGACTTGAACCCATGACCTCA 59.649 52.381 0.00 0.00 32.45 3.86
6203 10480 1.630878 AGGACTTGAACCCATGACCTC 59.369 52.381 0.00 0.00 37.82 3.85
6204 10481 1.352352 CAGGACTTGAACCCATGACCT 59.648 52.381 0.00 0.00 40.96 3.85
6205 10482 1.614317 CCAGGACTTGAACCCATGACC 60.614 57.143 0.00 0.00 34.29 4.02
6206 10483 1.351017 TCCAGGACTTGAACCCATGAC 59.649 52.381 0.00 0.00 0.00 3.06
6207 10484 1.741028 TCCAGGACTTGAACCCATGA 58.259 50.000 0.00 0.00 0.00 3.07
6208 10485 2.558359 GTTTCCAGGACTTGAACCCATG 59.442 50.000 0.00 0.00 0.00 3.66
6209 10486 2.176798 TGTTTCCAGGACTTGAACCCAT 59.823 45.455 0.00 0.00 0.00 4.00
6210 10487 1.566703 TGTTTCCAGGACTTGAACCCA 59.433 47.619 0.00 0.00 0.00 4.51
6211 10488 2.230660 CTGTTTCCAGGACTTGAACCC 58.769 52.381 0.00 0.00 34.90 4.11
6212 10489 1.609072 GCTGTTTCCAGGACTTGAACC 59.391 52.381 0.00 0.00 39.22 3.62
6213 10490 1.609072 GGCTGTTTCCAGGACTTGAAC 59.391 52.381 0.00 0.00 39.22 3.18
6214 10491 1.494721 AGGCTGTTTCCAGGACTTGAA 59.505 47.619 0.00 0.00 39.22 2.69
6215 10492 1.072331 GAGGCTGTTTCCAGGACTTGA 59.928 52.381 0.00 0.00 39.22 3.02
6216 10493 1.072965 AGAGGCTGTTTCCAGGACTTG 59.927 52.381 0.00 0.00 39.22 3.16
6217 10494 1.439543 AGAGGCTGTTTCCAGGACTT 58.560 50.000 0.00 0.00 39.22 3.01
6218 10495 1.439543 AAGAGGCTGTTTCCAGGACT 58.560 50.000 0.00 0.00 39.22 3.85
6219 10496 2.038557 TGTAAGAGGCTGTTTCCAGGAC 59.961 50.000 0.90 0.00 39.22 3.85
6220 10497 2.303022 CTGTAAGAGGCTGTTTCCAGGA 59.697 50.000 0.90 0.00 35.89 3.86
6221 10498 2.303022 TCTGTAAGAGGCTGTTTCCAGG 59.697 50.000 17.71 5.83 38.67 4.45
6222 10499 3.685139 TCTGTAAGAGGCTGTTTCCAG 57.315 47.619 0.90 9.48 38.67 3.86
6234 10511 5.250774 AGCCTTTCCCTACATTTCTGTAAGA 59.749 40.000 0.00 0.00 44.68 2.10
6235 10512 5.355350 CAGCCTTTCCCTACATTTCTGTAAG 59.645 44.000 0.00 0.00 37.41 2.34
6236 10513 5.253330 CAGCCTTTCCCTACATTTCTGTAA 58.747 41.667 0.00 0.00 37.41 2.41
6237 10514 4.843728 CAGCCTTTCCCTACATTTCTGTA 58.156 43.478 0.00 0.00 36.79 2.74
6238 10515 3.690460 CAGCCTTTCCCTACATTTCTGT 58.310 45.455 0.00 0.00 39.49 3.41
6239 10516 2.424956 GCAGCCTTTCCCTACATTTCTG 59.575 50.000 0.00 0.00 0.00 3.02
6240 10517 2.728007 GCAGCCTTTCCCTACATTTCT 58.272 47.619 0.00 0.00 0.00 2.52
6241 10518 1.401905 CGCAGCCTTTCCCTACATTTC 59.598 52.381 0.00 0.00 0.00 2.17
6242 10519 1.271926 ACGCAGCCTTTCCCTACATTT 60.272 47.619 0.00 0.00 0.00 2.32
6243 10520 0.328258 ACGCAGCCTTTCCCTACATT 59.672 50.000 0.00 0.00 0.00 2.71
6244 10521 1.134491 GTACGCAGCCTTTCCCTACAT 60.134 52.381 0.00 0.00 0.00 2.29
6245 10522 0.248289 GTACGCAGCCTTTCCCTACA 59.752 55.000 0.00 0.00 0.00 2.74
6246 10523 0.535797 AGTACGCAGCCTTTCCCTAC 59.464 55.000 0.00 0.00 0.00 3.18
6247 10524 2.148446 TAGTACGCAGCCTTTCCCTA 57.852 50.000 0.00 0.00 0.00 3.53
6248 10525 1.497161 ATAGTACGCAGCCTTTCCCT 58.503 50.000 0.00 0.00 0.00 4.20
6249 10526 2.626743 TCTATAGTACGCAGCCTTTCCC 59.373 50.000 0.00 0.00 0.00 3.97
6250 10527 3.552478 GGTCTATAGTACGCAGCCTTTCC 60.552 52.174 0.00 0.00 0.00 3.13
6251 10528 3.552478 GGGTCTATAGTACGCAGCCTTTC 60.552 52.174 0.00 0.00 0.00 2.62
6252 10529 2.364647 GGGTCTATAGTACGCAGCCTTT 59.635 50.000 0.00 0.00 0.00 3.11
6253 10530 1.962100 GGGTCTATAGTACGCAGCCTT 59.038 52.381 0.00 0.00 0.00 4.35
6254 10531 1.133575 TGGGTCTATAGTACGCAGCCT 60.134 52.381 13.98 0.00 35.18 4.58
6255 10532 1.325355 TGGGTCTATAGTACGCAGCC 58.675 55.000 13.98 8.23 35.18 4.85
6256 10533 3.181478 ACTTTGGGTCTATAGTACGCAGC 60.181 47.826 16.00 2.07 40.36 5.25
6257 10534 4.360563 CACTTTGGGTCTATAGTACGCAG 58.639 47.826 16.00 11.29 40.36 5.18
6258 10535 3.131577 CCACTTTGGGTCTATAGTACGCA 59.868 47.826 13.98 13.98 37.94 5.24
6259 10536 3.131755 ACCACTTTGGGTCTATAGTACGC 59.868 47.826 0.00 6.13 43.37 4.42
6260 10537 4.996788 ACCACTTTGGGTCTATAGTACG 57.003 45.455 0.00 0.00 43.37 3.67
6270 10547 2.826003 GGGTCCGACCACTTTGGGT 61.826 63.158 19.43 0.00 43.37 4.51
6271 10548 2.033602 GGGTCCGACCACTTTGGG 59.966 66.667 19.43 0.00 43.37 4.12
6272 10549 0.605589 GAAGGGTCCGACCACTTTGG 60.606 60.000 19.43 0.00 41.02 3.28
6273 10550 0.605589 GGAAGGGTCCGACCACTTTG 60.606 60.000 19.43 0.00 41.02 2.77
6274 10551 1.759236 GGAAGGGTCCGACCACTTT 59.241 57.895 19.43 9.96 41.02 2.66
6275 10552 2.222013 GGGAAGGGTCCGACCACTT 61.222 63.158 19.43 17.88 46.04 3.16
6276 10553 2.606826 GGGAAGGGTCCGACCACT 60.607 66.667 19.43 10.80 46.04 4.00
6277 10554 2.606826 AGGGAAGGGTCCGACCAC 60.607 66.667 19.43 8.70 46.04 4.16
6278 10555 2.606519 CAGGGAAGGGTCCGACCA 60.607 66.667 19.43 0.00 46.04 4.02
6279 10556 3.400054 CCAGGGAAGGGTCCGACC 61.400 72.222 9.30 9.30 46.04 4.79
6280 10557 2.284405 TCCAGGGAAGGGTCCGAC 60.284 66.667 0.00 0.00 46.04 4.79
6281 10558 2.284405 GTCCAGGGAAGGGTCCGA 60.284 66.667 0.00 0.00 46.04 4.55
6282 10559 3.400054 GGTCCAGGGAAGGGTCCG 61.400 72.222 0.00 0.00 46.04 4.79
6283 10560 3.015753 GGGTCCAGGGAAGGGTCC 61.016 72.222 0.00 0.00 44.10 4.46
6284 10561 2.125225 AGGGTCCAGGGAAGGGTC 59.875 66.667 0.00 0.00 0.00 4.46
6285 10562 2.204151 CAGGGTCCAGGGAAGGGT 60.204 66.667 0.00 0.00 0.00 4.34
6286 10563 3.732849 GCAGGGTCCAGGGAAGGG 61.733 72.222 0.00 0.00 0.00 3.95
6287 10564 4.101448 CGCAGGGTCCAGGGAAGG 62.101 72.222 0.00 0.00 0.00 3.46
6288 10565 4.785453 GCGCAGGGTCCAGGGAAG 62.785 72.222 0.30 0.00 0.00 3.46
6300 10577 4.819761 TAGCTCCCGCTTGCGCAG 62.820 66.667 11.31 6.32 46.47 5.18
6303 10580 2.202932 ATGTAGCTCCCGCTTGCG 60.203 61.111 8.14 8.14 46.47 4.85
6304 10581 2.828128 GCATGTAGCTCCCGCTTGC 61.828 63.158 0.00 0.00 46.47 4.01
6305 10582 1.450134 TGCATGTAGCTCCCGCTTG 60.450 57.895 0.00 0.00 46.47 4.01
6306 10583 1.450312 GTGCATGTAGCTCCCGCTT 60.450 57.895 0.00 0.00 46.47 4.68
6312 10589 1.089920 CAACCTGGTGCATGTAGCTC 58.910 55.000 14.15 0.00 45.94 4.09
6313 10590 0.962356 GCAACCTGGTGCATGTAGCT 60.962 55.000 14.15 0.00 44.29 3.32
6314 10591 1.508088 GCAACCTGGTGCATGTAGC 59.492 57.895 6.00 6.00 44.29 3.58
6315 10592 2.183409 GGCAACCTGGTGCATGTAG 58.817 57.895 18.44 0.00 46.81 2.74
6316 10593 4.413928 GGCAACCTGGTGCATGTA 57.586 55.556 18.44 0.00 46.81 2.29
6328 10605 1.067354 CATCTCCAGCAAAAGGGCAAC 60.067 52.381 0.00 0.00 35.83 4.17
6329 10606 1.259609 CATCTCCAGCAAAAGGGCAA 58.740 50.000 0.00 0.00 35.83 4.52
6330 10607 1.252904 GCATCTCCAGCAAAAGGGCA 61.253 55.000 0.00 0.00 35.83 5.36
6331 10608 0.969409 AGCATCTCCAGCAAAAGGGC 60.969 55.000 0.00 0.00 0.00 5.19
6332 10609 1.101331 GAGCATCTCCAGCAAAAGGG 58.899 55.000 0.00 0.00 0.00 3.95
6429 10709 2.217750 TGTCTTCACAAATGTGGTCCG 58.782 47.619 13.22 1.01 45.65 4.79
6803 11137 3.091633 AGGGTCCAAATGATGTGAAGG 57.908 47.619 0.00 0.00 0.00 3.46
6807 11141 1.135315 CGCAAGGGTCCAAATGATGTG 60.135 52.381 0.00 0.00 0.00 3.21
7046 11395 2.419851 GCTCAATAGCTCCTTGCACTCT 60.420 50.000 0.00 0.00 45.85 3.24
7061 11410 3.382546 CCCGAATTGGATTTCTGCTCAAT 59.617 43.478 0.00 0.00 42.00 2.57
7150 11500 5.432885 ACGTGTGATGATGTACATATCGA 57.567 39.130 8.71 0.00 39.56 3.59
7151 11501 7.490868 GTTTACGTGTGATGATGTACATATCG 58.509 38.462 8.71 8.38 39.56 2.92
7152 11502 7.490868 CGTTTACGTGTGATGATGTACATATC 58.509 38.462 8.71 12.11 35.45 1.63
7513 11871 4.572389 AGAACAGGCGATTAATAGCAACTG 59.428 41.667 20.18 19.19 34.54 3.16
7834 15926 6.220201 AGCAAGTTACGTAATTGGCATTTTT 58.780 32.000 26.30 7.76 0.00 1.94
7850 15943 2.276732 AGCAGCCTTCAAGCAAGTTA 57.723 45.000 0.00 0.00 34.23 2.24
7949 16048 3.751518 ACAGAGTTCCGGCAGTAAAAAT 58.248 40.909 0.00 0.00 0.00 1.82
8094 16196 3.488778 AGCATCTTTGAGAGCCATAGG 57.511 47.619 0.00 0.00 0.00 2.57
8203 16305 9.350357 TCGTACAAGATTGAACATAACTACTTC 57.650 33.333 0.00 0.00 0.00 3.01
8245 16347 7.578310 TCGTAGTCCTATAAGTAAACAGCAT 57.422 36.000 0.00 0.00 0.00 3.79
8294 16396 0.774491 TGGGGTCCAACTTTAGGCCT 60.774 55.000 11.78 11.78 0.00 5.19
8351 16453 1.887198 CACAGGACTAGGAGAACACGT 59.113 52.381 0.00 0.00 0.00 4.49
8416 16518 4.097741 TCACTTGCACTGCATAAACACTTT 59.902 37.500 4.10 0.00 38.76 2.66
8421 16523 3.250762 TCACTCACTTGCACTGCATAAAC 59.749 43.478 4.10 0.00 38.76 2.01
8655 16871 4.344102 AGGTATCATGTAATGCGTGTAGGT 59.656 41.667 0.00 0.00 46.21 3.08
8710 16933 3.906846 ACAACTGGGATATCCTGATCCTC 59.093 47.826 21.18 3.46 44.35 3.71
8744 16967 8.263956 GCACTGTTGCTGTAGGTAAATACCAC 62.264 46.154 11.98 8.34 46.19 4.16
8801 17024 5.785243 TCAGTAATGTTTACACACGATGGA 58.215 37.500 0.00 0.00 35.03 3.41
8854 17077 9.033481 TCAATCTAAAGCATTTTGTTGACTTTG 57.967 29.630 0.00 0.00 40.09 2.77
8872 17096 7.957002 AGAAGACAGACAAGAACTCAATCTAA 58.043 34.615 0.00 0.00 0.00 2.10
8981 17208 2.126467 GTCGTTTGGTTGTGTACGCTA 58.874 47.619 8.10 0.00 34.24 4.26
8994 17222 1.651987 ACTGTGTGACTGGTCGTTTG 58.348 50.000 0.00 0.00 0.00 2.93
9005 17234 5.648960 TCGGTGTATGTCTTATACTGTGTGA 59.351 40.000 0.00 0.00 31.91 3.58
9025 17277 0.682852 TGGACTCCATTTTCGTCGGT 59.317 50.000 0.00 0.00 0.00 4.69
9055 17333 2.681097 GCTCTTTAGTTCCGGCTGGATT 60.681 50.000 16.96 9.74 45.91 3.01
9065 17343 0.444260 GCCTGCGTGCTCTTTAGTTC 59.556 55.000 0.00 0.00 0.00 3.01
9095 17375 0.541764 GGTGGCCCTTTTGGATGTGA 60.542 55.000 0.00 0.00 44.07 3.58
9130 17412 2.046988 TCCGTCGTCGCCTACTGA 60.047 61.111 0.00 0.00 35.54 3.41
9134 17416 3.200593 GAGCTCCGTCGTCGCCTA 61.201 66.667 0.87 0.00 35.54 3.93
9153 17438 2.360726 TCTGTCTACTCCGCGGCA 60.361 61.111 23.51 10.80 0.00 5.69
9195 17480 2.344950 CAACAGGACTCTGATCTGCAC 58.655 52.381 0.00 0.00 43.49 4.57
9264 17549 0.173708 CCTCTCACCCAGCTAACGTC 59.826 60.000 0.00 0.00 0.00 4.34
9273 17558 2.214216 CGTGTTCCCCTCTCACCCA 61.214 63.158 0.00 0.00 0.00 4.51
9392 17677 1.112113 TCCCGAGCTTGTGTCCTATC 58.888 55.000 0.00 0.00 0.00 2.08
9396 17681 2.432628 CGTCCCGAGCTTGTGTCC 60.433 66.667 0.00 0.00 0.00 4.02
9501 17786 3.797353 GGCTCCCCGGAAGATGCA 61.797 66.667 0.73 0.00 0.00 3.96
9585 17870 2.551459 CCTCTGGCAACTTTGTCAAGAG 59.449 50.000 12.40 12.40 42.96 2.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.