Multiple sequence alignment - TraesCS3B01G207000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G207000 chr3B 100.000 9397 0 0 1 9397 242660487 242669883 0.000000e+00 17354.0
1 TraesCS3B01G207000 chr3B 85.556 450 57 6 51 495 685432792 685433238 1.850000e-126 464.0
2 TraesCS3B01G207000 chr3B 83.333 120 13 1 670 782 117941031 117941150 4.640000e-18 104.0
3 TraesCS3B01G207000 chr7B 99.026 5338 49 3 2343 7678 741260659 741255323 0.000000e+00 9566.0
4 TraesCS3B01G207000 chr7B 83.082 597 46 23 8839 9397 721394874 721394295 8.480000e-135 492.0
5 TraesCS3B01G207000 chr7B 92.208 77 6 0 8118 8194 721395022 721394946 9.980000e-20 110.0
6 TraesCS3B01G207000 chr5B 99.080 5325 47 2 2343 7666 224614631 224609308 0.000000e+00 9561.0
7 TraesCS3B01G207000 chr5B 99.061 5325 48 2 2343 7666 519248036 519242713 0.000000e+00 9555.0
8 TraesCS3B01G207000 chr2A 99.061 5326 44 4 2342 7666 456651269 456645949 0.000000e+00 9553.0
9 TraesCS3B01G207000 chr2A 99.024 5326 48 3 2343 7667 762872902 762878224 0.000000e+00 9544.0
10 TraesCS3B01G207000 chr4A 98.951 5339 49 3 2343 7680 16029670 16024338 0.000000e+00 9542.0
11 TraesCS3B01G207000 chr6B 98.986 5326 48 2 2345 7669 118857239 118851919 0.000000e+00 9531.0
12 TraesCS3B01G207000 chr6B 98.822 5350 54 7 2330 7674 22703577 22708922 0.000000e+00 9522.0
13 TraesCS3B01G207000 chr6B 86.544 706 73 12 1651 2342 216875059 216875756 0.000000e+00 758.0
14 TraesCS3B01G207000 chr6B 90.583 446 41 1 7667 8112 216875752 216876196 2.920000e-164 590.0
15 TraesCS3B01G207000 chr6B 86.486 481 57 6 1 479 162565804 162566278 1.080000e-143 521.0
16 TraesCS3B01G207000 chr6B 88.785 428 42 6 1 424 669553087 669553512 3.890000e-143 520.0
17 TraesCS3B01G207000 chr6B 87.436 390 35 10 1 387 135132041 135132419 4.030000e-118 436.0
18 TraesCS3B01G207000 chr6B 90.058 171 14 2 1060 1230 216870238 216870405 1.590000e-52 219.0
19 TraesCS3B01G207000 chr6B 85.119 168 17 2 623 783 162566340 162566506 2.100000e-36 165.0
20 TraesCS3B01G207000 chr6B 96.591 88 3 0 912 999 216870123 216870210 7.600000e-31 147.0
21 TraesCS3B01G207000 chr7A 98.930 5329 53 3 2343 7670 317174179 317168854 0.000000e+00 9522.0
22 TraesCS3B01G207000 chr7A 87.152 467 52 7 1 464 26787335 26786874 3.010000e-144 523.0
23 TraesCS3B01G207000 chr7A 81.619 593 68 17 8204 8777 598328278 598328848 4.000000e-123 453.0
24 TraesCS3B01G207000 chr7A 89.172 314 18 2 8206 8503 9479719 9480032 2.480000e-100 377.0
25 TraesCS3B01G207000 chr7A 88.396 293 24 4 8491 8780 9480049 9480334 2.510000e-90 344.0
26 TraesCS3B01G207000 chr7A 93.798 129 7 1 8341 8468 269275295 269275167 9.630000e-45 193.0
27 TraesCS3B01G207000 chr7A 90.000 60 6 0 8124 8183 644005910 644005851 2.810000e-10 78.7
28 TraesCS3B01G207000 chr3A 92.975 1765 73 16 7667 9397 202599278 202597531 0.000000e+00 2525.0
29 TraesCS3B01G207000 chr3A 94.821 1120 44 7 1005 2113 202602026 202600910 0.000000e+00 1735.0
30 TraesCS3B01G207000 chr3A 83.778 487 68 8 4 485 672071133 672070653 1.440000e-122 451.0
31 TraesCS3B01G207000 chr3A 81.724 580 65 19 8219 8780 9050327 9049771 6.690000e-121 446.0
32 TraesCS3B01G207000 chr3A 95.339 236 7 1 2111 2342 202599509 202599274 1.150000e-98 372.0
33 TraesCS3B01G207000 chr3A 93.013 229 14 2 783 1010 202655673 202655446 5.440000e-87 333.0
34 TraesCS3B01G207000 chr3A 94.783 115 6 0 8814 8928 595960233 595960347 7.500000e-41 180.0
35 TraesCS3B01G207000 chr6A 90.226 1463 105 13 902 2342 158069388 158067942 0.000000e+00 1875.0
36 TraesCS3B01G207000 chr6A 94.678 451 22 1 7667 8117 158067946 158067498 0.000000e+00 699.0
37 TraesCS3B01G207000 chr6A 84.091 484 65 9 4 480 597453531 597453053 3.090000e-124 457.0
38 TraesCS3B01G207000 chr3D 94.511 1166 45 4 8250 9397 167381090 167382254 0.000000e+00 1781.0
39 TraesCS3B01G207000 chr3D 88.908 586 45 7 965 1532 167354915 167355498 0.000000e+00 704.0
40 TraesCS3B01G207000 chr3D 96.635 416 14 0 7703 8118 167380563 167380978 0.000000e+00 691.0
41 TraesCS3B01G207000 chr3D 93.114 334 23 0 1526 1859 167379237 167379570 3.050000e-134 490.0
42 TraesCS3B01G207000 chr3D 92.515 334 25 0 1526 1859 167378574 167378907 6.600000e-131 479.0
43 TraesCS3B01G207000 chr3D 92.216 334 26 0 1526 1859 167377912 167378245 3.070000e-129 473.0
44 TraesCS3B01G207000 chr3D 86.920 237 22 3 1853 2080 167380076 167380312 3.370000e-64 257.0
45 TraesCS3B01G207000 chr3D 89.888 178 17 1 2166 2342 167380363 167380540 2.640000e-55 228.0
46 TraesCS3B01G207000 chr6D 89.601 1404 96 19 973 2342 123116546 123117933 0.000000e+00 1738.0
47 TraesCS3B01G207000 chr6D 93.126 451 30 1 7667 8117 123117929 123118378 0.000000e+00 660.0
48 TraesCS3B01G207000 chr6D 94.068 118 5 1 9048 9163 426479683 426479800 2.700000e-40 178.0
49 TraesCS3B01G207000 chr6D 95.122 82 4 0 899 980 123116290 123116371 7.660000e-26 130.0
50 TraesCS3B01G207000 chrUn 89.848 591 40 7 8206 8779 12175145 12175732 0.000000e+00 741.0
51 TraesCS3B01G207000 chr2D 84.103 585 35 26 8839 9383 11789129 11789695 6.510000e-141 512.0
52 TraesCS3B01G207000 chr2D 92.208 77 6 0 8118 8194 11788981 11789057 9.980000e-20 110.0
53 TraesCS3B01G207000 chr1D 84.647 482 58 14 3 480 10361773 10361304 5.140000e-127 466.0
54 TraesCS3B01G207000 chr1D 84.200 481 67 9 4 480 298153767 298154242 8.600000e-125 459.0
55 TraesCS3B01G207000 chr1D 80.182 550 76 17 253 782 260225469 260224933 1.910000e-101 381.0
56 TraesCS3B01G207000 chr7D 89.011 273 21 7 8336 8603 252032436 252032704 7.030000e-86 329.0
57 TraesCS3B01G207000 chr2B 87.654 243 15 1 8206 8433 98580437 98580679 1.560000e-67 268.0
58 TraesCS3B01G207000 chr1B 79.897 388 59 11 421 795 677584904 677585285 5.590000e-67 267.0
59 TraesCS3B01G207000 chr1A 90.196 51 4 1 8133 8183 517640805 517640756 2.190000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G207000 chr3B 242660487 242669883 9396 False 17354.000000 17354 100.000000 1 9397 1 chr3B.!!$F2 9396
1 TraesCS3B01G207000 chr7B 741255323 741260659 5336 True 9566.000000 9566 99.026000 2343 7678 1 chr7B.!!$R1 5335
2 TraesCS3B01G207000 chr7B 721394295 721395022 727 True 301.000000 492 87.645000 8118 9397 2 chr7B.!!$R2 1279
3 TraesCS3B01G207000 chr5B 224609308 224614631 5323 True 9561.000000 9561 99.080000 2343 7666 1 chr5B.!!$R1 5323
4 TraesCS3B01G207000 chr5B 519242713 519248036 5323 True 9555.000000 9555 99.061000 2343 7666 1 chr5B.!!$R2 5323
5 TraesCS3B01G207000 chr2A 456645949 456651269 5320 True 9553.000000 9553 99.061000 2342 7666 1 chr2A.!!$R1 5324
6 TraesCS3B01G207000 chr2A 762872902 762878224 5322 False 9544.000000 9544 99.024000 2343 7667 1 chr2A.!!$F1 5324
7 TraesCS3B01G207000 chr4A 16024338 16029670 5332 True 9542.000000 9542 98.951000 2343 7680 1 chr4A.!!$R1 5337
8 TraesCS3B01G207000 chr6B 118851919 118857239 5320 True 9531.000000 9531 98.986000 2345 7669 1 chr6B.!!$R1 5324
9 TraesCS3B01G207000 chr6B 22703577 22708922 5345 False 9522.000000 9522 98.822000 2330 7674 1 chr6B.!!$F1 5344
10 TraesCS3B01G207000 chr6B 216875059 216876196 1137 False 674.000000 758 88.563500 1651 8112 2 chr6B.!!$F6 6461
11 TraesCS3B01G207000 chr6B 162565804 162566506 702 False 343.000000 521 85.802500 1 783 2 chr6B.!!$F4 782
12 TraesCS3B01G207000 chr7A 317168854 317174179 5325 True 9522.000000 9522 98.930000 2343 7670 1 chr7A.!!$R3 5327
13 TraesCS3B01G207000 chr7A 598328278 598328848 570 False 453.000000 453 81.619000 8204 8777 1 chr7A.!!$F1 573
14 TraesCS3B01G207000 chr7A 9479719 9480334 615 False 360.500000 377 88.784000 8206 8780 2 chr7A.!!$F2 574
15 TraesCS3B01G207000 chr3A 202597531 202602026 4495 True 1544.000000 2525 94.378333 1005 9397 3 chr3A.!!$R4 8392
16 TraesCS3B01G207000 chr3A 9049771 9050327 556 True 446.000000 446 81.724000 8219 8780 1 chr3A.!!$R1 561
17 TraesCS3B01G207000 chr6A 158067498 158069388 1890 True 1287.000000 1875 92.452000 902 8117 2 chr6A.!!$R2 7215
18 TraesCS3B01G207000 chr3D 167354915 167355498 583 False 704.000000 704 88.908000 965 1532 1 chr3D.!!$F1 567
19 TraesCS3B01G207000 chr3D 167377912 167382254 4342 False 628.428571 1781 92.257000 1526 9397 7 chr3D.!!$F2 7871
20 TraesCS3B01G207000 chr6D 123116290 123118378 2088 False 842.666667 1738 92.616333 899 8117 3 chr6D.!!$F2 7218
21 TraesCS3B01G207000 chrUn 12175145 12175732 587 False 741.000000 741 89.848000 8206 8779 1 chrUn.!!$F1 573
22 TraesCS3B01G207000 chr2D 11788981 11789695 714 False 311.000000 512 88.155500 8118 9383 2 chr2D.!!$F1 1265
23 TraesCS3B01G207000 chr1D 260224933 260225469 536 True 381.000000 381 80.182000 253 782 1 chr1D.!!$R2 529

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
473 474 0.038618 GTTCAAAACCCATCGGCCAC 60.039 55.000 2.24 0.00 0.00 5.01 F
593 594 0.103208 CAGGACACACGCCCTATCTC 59.897 60.000 0.00 0.00 0.00 2.75 F
1733 2603 0.035056 GCTGCCACCTCCTTGTGTAT 60.035 55.000 0.00 0.00 34.35 2.29 F
2184 4999 0.177373 GTGTGGATACCCCGAACCTC 59.823 60.000 0.00 0.00 37.93 3.85 F
3289 6138 1.301401 CCGGCCTTGTTGTCTTCGA 60.301 57.895 0.00 0.00 0.00 3.71 F
3379 6228 1.285950 CACTCCGTCGTCAGCTTGA 59.714 57.895 0.00 0.00 0.00 3.02 F
3478 6327 1.681327 GACAGCCCCTCACCGACTA 60.681 63.158 0.00 0.00 0.00 2.59 F
5059 8003 2.627699 CAAGGTATTTGGGTGTGCTTGT 59.372 45.455 0.00 0.00 32.95 3.16 F
6205 9150 1.355796 CGGTTTTCGGCAGCGTCATA 61.356 55.000 0.00 0.00 34.75 2.15 F
6762 9793 1.780503 TACAGAGAGCTGGCATGCTA 58.219 50.000 18.92 11.28 46.60 3.49 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1727 2597 1.188871 TGGCGACCCTCACATACACA 61.189 55.000 0.00 0.00 0.00 3.72 R
1754 2624 1.531840 GATCTCTAGGCCCCGCAGA 60.532 63.158 0.00 0.00 0.00 4.26 R
3289 6138 0.820871 GGCCTCATGAGACGTCTTCT 59.179 55.000 24.62 7.28 37.23 2.85 R
3379 6228 3.244044 GGAGTCAAGCTTCTGACACTCTT 60.244 47.826 18.40 0.00 46.81 2.85 R
4562 7411 0.768221 AAGTCTGAGCAGGACCCCAA 60.768 55.000 0.00 0.00 34.56 4.12 R
5371 8315 4.801521 TGATGATGGTGAATCCTCCAAT 57.198 40.909 0.00 0.00 39.16 3.16 R
6205 9150 4.054359 AGGTGTCCTCATAGTCAAGACT 57.946 45.455 7.96 7.96 45.02 3.24 R
6762 9793 0.681564 TGGTGGTCGGTTTGCACTTT 60.682 50.000 0.00 0.00 0.00 2.66 R
7806 10837 0.471211 TCCCTCGGAAGTTCACCACT 60.471 55.000 5.01 0.00 37.30 4.00 R
8811 11956 0.760189 AACAATTGCCTGCACCCAGT 60.760 50.000 5.05 0.00 37.38 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 7.744087 AACATGAACACTTTTATAGACTGCA 57.256 32.000 0.00 0.00 0.00 4.41
35 36 7.928307 ACATGAACACTTTTATAGACTGCAT 57.072 32.000 0.00 0.00 0.00 3.96
36 37 9.448438 AACATGAACACTTTTATAGACTGCATA 57.552 29.630 0.00 0.00 0.00 3.14
37 38 9.102757 ACATGAACACTTTTATAGACTGCATAG 57.897 33.333 0.00 0.00 0.00 2.23
38 39 8.554528 CATGAACACTTTTATAGACTGCATAGG 58.445 37.037 0.00 0.00 0.00 2.57
40 41 8.755028 TGAACACTTTTATAGACTGCATAGGTA 58.245 33.333 0.00 0.00 0.00 3.08
41 42 9.765795 GAACACTTTTATAGACTGCATAGGTAT 57.234 33.333 0.00 0.00 0.00 2.73
53 54 8.322091 AGACTGCATAGGTATTTTGTTAGAACT 58.678 33.333 0.00 0.00 0.00 3.01
54 55 8.268850 ACTGCATAGGTATTTTGTTAGAACTG 57.731 34.615 0.00 0.00 0.00 3.16
55 56 7.883311 ACTGCATAGGTATTTTGTTAGAACTGT 59.117 33.333 0.00 0.00 0.00 3.55
56 57 8.039603 TGCATAGGTATTTTGTTAGAACTGTG 57.960 34.615 0.00 0.00 0.00 3.66
57 58 7.880713 TGCATAGGTATTTTGTTAGAACTGTGA 59.119 33.333 0.00 0.00 0.00 3.58
58 59 8.726988 GCATAGGTATTTTGTTAGAACTGTGAA 58.273 33.333 0.00 0.00 0.00 3.18
62 63 9.574516 AGGTATTTTGTTAGAACTGTGAAGATT 57.425 29.630 0.00 0.00 0.00 2.40
70 71 9.944376 TGTTAGAACTGTGAAGATTTATAAGCT 57.056 29.630 0.00 0.00 0.00 3.74
166 167 9.665719 ATTTGGTAAAACTGTGAAGATTTGTTT 57.334 25.926 0.00 0.00 33.04 2.83
169 170 9.179909 TGGTAAAACTGTGAAGATTTGTTTCTA 57.820 29.630 0.00 0.00 31.54 2.10
203 204 9.624697 CTTAAACATTCTAAACTTATGCAAGCA 57.375 29.630 0.00 0.00 34.94 3.91
327 328 9.083080 AGTTTTTGTTGAAATAAGTAACACTGC 57.917 29.630 0.00 0.00 34.38 4.40
328 329 8.865001 GTTTTTGTTGAAATAAGTAACACTGCA 58.135 29.630 0.00 0.00 34.38 4.41
329 330 8.988064 TTTTGTTGAAATAAGTAACACTGCAA 57.012 26.923 0.00 0.00 34.38 4.08
330 331 8.988064 TTTGTTGAAATAAGTAACACTGCAAA 57.012 26.923 0.00 0.00 34.38 3.68
331 332 8.988064 TTGTTGAAATAAGTAACACTGCAAAA 57.012 26.923 0.00 0.00 34.38 2.44
332 333 9.593134 TTGTTGAAATAAGTAACACTGCAAAAT 57.407 25.926 0.00 0.00 34.38 1.82
341 342 7.448748 AGTAACACTGCAAAATAGTTTAGGG 57.551 36.000 0.00 0.00 0.00 3.53
344 345 5.631119 ACACTGCAAAATAGTTTAGGGTCT 58.369 37.500 0.00 0.00 0.00 3.85
346 347 5.123979 CACTGCAAAATAGTTTAGGGTCTCC 59.876 44.000 0.00 0.00 0.00 3.71
347 348 5.222048 ACTGCAAAATAGTTTAGGGTCTCCA 60.222 40.000 0.00 0.00 34.83 3.86
348 349 5.253330 TGCAAAATAGTTTAGGGTCTCCAG 58.747 41.667 0.00 0.00 34.83 3.86
350 351 5.501156 CAAAATAGTTTAGGGTCTCCAGCT 58.499 41.667 0.00 0.00 34.83 4.24
352 353 6.487299 AAATAGTTTAGGGTCTCCAGCTAG 57.513 41.667 0.00 0.00 34.83 3.42
353 354 2.112190 AGTTTAGGGTCTCCAGCTAGC 58.888 52.381 6.62 6.62 34.83 3.42
354 355 2.112190 GTTTAGGGTCTCCAGCTAGCT 58.888 52.381 12.68 12.68 34.83 3.32
355 356 2.502130 GTTTAGGGTCTCCAGCTAGCTT 59.498 50.000 16.46 0.00 34.83 3.74
358 359 2.393646 AGGGTCTCCAGCTAGCTTAAG 58.606 52.381 16.46 15.21 34.83 1.85
359 360 1.414550 GGGTCTCCAGCTAGCTTAAGG 59.585 57.143 16.46 14.06 0.00 2.69
360 361 2.389715 GGTCTCCAGCTAGCTTAAGGA 58.610 52.381 16.46 17.73 0.00 3.36
361 362 2.101750 GGTCTCCAGCTAGCTTAAGGAC 59.898 54.545 16.46 18.75 0.00 3.85
362 363 2.025155 TCTCCAGCTAGCTTAAGGACG 58.975 52.381 16.46 12.35 0.00 4.79
363 364 0.460311 TCCAGCTAGCTTAAGGACGC 59.540 55.000 16.46 0.00 0.00 5.19
364 365 0.175760 CCAGCTAGCTTAAGGACGCA 59.824 55.000 16.46 0.00 0.00 5.24
365 366 1.202580 CCAGCTAGCTTAAGGACGCAT 60.203 52.381 16.46 0.00 0.00 4.73
367 368 1.202580 AGCTAGCTTAAGGACGCATGG 60.203 52.381 12.68 0.00 0.00 3.66
368 369 1.202533 GCTAGCTTAAGGACGCATGGA 60.203 52.381 7.70 0.00 0.00 3.41
369 370 2.548920 GCTAGCTTAAGGACGCATGGAT 60.549 50.000 7.70 0.00 0.00 3.41
371 372 4.621747 GCTAGCTTAAGGACGCATGGATAT 60.622 45.833 7.70 0.00 0.00 1.63
372 373 5.394224 GCTAGCTTAAGGACGCATGGATATA 60.394 44.000 7.70 0.00 0.00 0.86
373 374 5.683876 AGCTTAAGGACGCATGGATATAT 57.316 39.130 4.29 0.00 0.00 0.86
374 375 6.791867 AGCTTAAGGACGCATGGATATATA 57.208 37.500 4.29 0.00 0.00 0.86
375 376 7.182817 AGCTTAAGGACGCATGGATATATAA 57.817 36.000 4.29 0.00 0.00 0.98
376 377 7.796054 AGCTTAAGGACGCATGGATATATAAT 58.204 34.615 4.29 0.00 0.00 1.28
377 378 7.712639 AGCTTAAGGACGCATGGATATATAATG 59.287 37.037 4.29 4.25 0.00 1.90
378 379 7.519008 GCTTAAGGACGCATGGATATATAATGC 60.519 40.741 17.31 17.31 42.59 3.56
380 381 5.118990 AGGACGCATGGATATATAATGCAC 58.881 41.667 23.00 17.75 45.56 4.57
381 382 4.875536 GGACGCATGGATATATAATGCACA 59.124 41.667 23.00 3.96 45.56 4.57
382 383 5.528690 GGACGCATGGATATATAATGCACAT 59.471 40.000 23.00 13.26 45.56 3.21
383 384 6.038603 GGACGCATGGATATATAATGCACATT 59.961 38.462 23.00 0.94 45.56 2.71
384 385 7.395190 ACGCATGGATATATAATGCACATTT 57.605 32.000 23.00 7.40 45.56 2.32
395 396 2.724403 GCACATTTGCGCTTACACC 58.276 52.632 9.73 0.00 39.50 4.16
397 398 1.967762 CACATTTGCGCTTACACCAG 58.032 50.000 9.73 0.00 0.00 4.00
398 399 1.535028 CACATTTGCGCTTACACCAGA 59.465 47.619 9.73 0.00 0.00 3.86
399 400 2.031245 CACATTTGCGCTTACACCAGAA 60.031 45.455 9.73 0.00 0.00 3.02
400 401 2.621055 ACATTTGCGCTTACACCAGAAA 59.379 40.909 9.73 0.00 0.00 2.52
401 402 3.067461 ACATTTGCGCTTACACCAGAAAA 59.933 39.130 9.73 0.00 0.00 2.29
402 403 2.766970 TTGCGCTTACACCAGAAAAC 57.233 45.000 9.73 0.00 0.00 2.43
404 405 1.601903 TGCGCTTACACCAGAAAACTG 59.398 47.619 9.73 0.00 0.00 3.16
405 406 1.602377 GCGCTTACACCAGAAAACTGT 59.398 47.619 0.00 0.00 0.00 3.55
406 407 2.032924 GCGCTTACACCAGAAAACTGTT 59.967 45.455 0.00 0.00 0.00 3.16
407 408 3.249080 GCGCTTACACCAGAAAACTGTTA 59.751 43.478 0.00 0.00 0.00 2.41
410 411 5.851177 CGCTTACACCAGAAAACTGTTATTG 59.149 40.000 0.00 0.00 0.00 1.90
412 413 6.238925 GCTTACACCAGAAAACTGTTATTGGT 60.239 38.462 14.19 14.19 39.38 3.67
414 415 4.298332 CACCAGAAAACTGTTATTGGTGC 58.702 43.478 24.91 0.01 46.07 5.01
416 417 4.588528 ACCAGAAAACTGTTATTGGTGCAT 59.411 37.500 17.40 0.32 37.52 3.96
417 418 5.070313 ACCAGAAAACTGTTATTGGTGCATT 59.930 36.000 17.40 0.00 37.52 3.56
418 419 5.406175 CCAGAAAACTGTTATTGGTGCATTG 59.594 40.000 0.00 0.00 0.00 2.82
419 420 5.406175 CAGAAAACTGTTATTGGTGCATTGG 59.594 40.000 0.00 0.00 0.00 3.16
422 423 6.412362 AAACTGTTATTGGTGCATTGGTTA 57.588 33.333 0.00 0.00 0.00 2.85
423 424 5.643379 ACTGTTATTGGTGCATTGGTTAG 57.357 39.130 0.00 0.00 0.00 2.34
424 425 4.462483 ACTGTTATTGGTGCATTGGTTAGG 59.538 41.667 0.00 0.00 0.00 2.69
425 426 3.194542 TGTTATTGGTGCATTGGTTAGGC 59.805 43.478 0.00 0.00 0.00 3.93
426 427 1.935799 ATTGGTGCATTGGTTAGGCA 58.064 45.000 0.00 0.00 34.70 4.75
427 428 1.935799 TTGGTGCATTGGTTAGGCAT 58.064 45.000 0.00 0.00 40.05 4.40
428 429 1.184431 TGGTGCATTGGTTAGGCATG 58.816 50.000 0.00 0.00 40.05 4.06
429 430 0.179103 GGTGCATTGGTTAGGCATGC 60.179 55.000 9.90 9.90 43.13 4.06
430 431 0.526096 GTGCATTGGTTAGGCATGCG 60.526 55.000 12.44 0.00 45.33 4.73
431 432 1.589727 GCATTGGTTAGGCATGCGC 60.590 57.895 12.44 0.00 34.37 6.09
432 433 1.298563 CATTGGTTAGGCATGCGCG 60.299 57.895 12.44 0.00 39.92 6.86
433 434 3.124798 ATTGGTTAGGCATGCGCGC 62.125 57.895 27.26 27.26 39.92 6.86
448 449 3.434319 CGCCTCCACGCTGCAAAT 61.434 61.111 0.00 0.00 0.00 2.32
449 450 2.486966 GCCTCCACGCTGCAAATC 59.513 61.111 0.00 0.00 0.00 2.17
451 452 1.503542 CCTCCACGCTGCAAATCAC 59.496 57.895 0.00 0.00 0.00 3.06
452 453 1.133253 CTCCACGCTGCAAATCACG 59.867 57.895 0.00 0.00 0.00 4.35
453 454 2.176546 CCACGCTGCAAATCACGG 59.823 61.111 0.00 0.00 0.00 4.94
454 455 2.176546 CACGCTGCAAATCACGGG 59.823 61.111 0.00 0.00 0.00 5.28
455 456 2.281484 ACGCTGCAAATCACGGGT 60.281 55.556 0.00 0.00 0.00 5.28
456 457 1.896660 ACGCTGCAAATCACGGGTT 60.897 52.632 0.00 0.00 0.00 4.11
457 458 1.154225 CGCTGCAAATCACGGGTTC 60.154 57.895 0.00 0.00 0.00 3.62
461 462 2.801342 GCTGCAAATCACGGGTTCAAAA 60.801 45.455 0.00 0.00 0.00 2.44
462 463 2.794350 CTGCAAATCACGGGTTCAAAAC 59.206 45.455 0.00 0.00 0.00 2.43
471 472 1.589630 GGTTCAAAACCCATCGGCC 59.410 57.895 0.00 0.00 46.12 6.13
473 474 0.038618 GTTCAAAACCCATCGGCCAC 60.039 55.000 2.24 0.00 0.00 5.01
474 475 0.468214 TTCAAAACCCATCGGCCACA 60.468 50.000 2.24 0.00 0.00 4.17
478 479 1.347062 AAACCCATCGGCCACAATTT 58.653 45.000 2.24 0.00 0.00 1.82
482 483 3.103742 ACCCATCGGCCACAATTTAATT 58.896 40.909 2.24 0.00 0.00 1.40
483 484 3.517500 ACCCATCGGCCACAATTTAATTT 59.482 39.130 2.24 0.00 0.00 1.82
484 485 4.019771 ACCCATCGGCCACAATTTAATTTT 60.020 37.500 2.24 0.00 0.00 1.82
485 486 4.570369 CCCATCGGCCACAATTTAATTTTC 59.430 41.667 2.24 0.00 0.00 2.29
487 488 5.063312 CCATCGGCCACAATTTAATTTTCAC 59.937 40.000 2.24 0.00 0.00 3.18
488 489 5.201713 TCGGCCACAATTTAATTTTCACA 57.798 34.783 2.24 0.00 0.00 3.58
490 491 6.925211 TCGGCCACAATTTAATTTTCACATA 58.075 32.000 2.24 0.00 0.00 2.29
491 492 7.378966 TCGGCCACAATTTAATTTTCACATAA 58.621 30.769 2.24 0.00 0.00 1.90
500 501 9.971744 AATTTAATTTTCACATAATTTGCTCGC 57.028 25.926 0.00 0.00 0.00 5.03
501 502 8.755696 TTTAATTTTCACATAATTTGCTCGCT 57.244 26.923 0.00 0.00 0.00 4.93
502 503 6.636666 AATTTTCACATAATTTGCTCGCTG 57.363 33.333 0.00 0.00 0.00 5.18
503 504 5.369685 TTTTCACATAATTTGCTCGCTGA 57.630 34.783 0.00 0.00 0.00 4.26
504 505 4.340894 TTCACATAATTTGCTCGCTGAC 57.659 40.909 0.00 0.00 0.00 3.51
505 506 3.333804 TCACATAATTTGCTCGCTGACA 58.666 40.909 0.00 0.00 0.00 3.58
506 507 3.371898 TCACATAATTTGCTCGCTGACAG 59.628 43.478 0.00 0.00 0.00 3.51
507 508 3.371898 CACATAATTTGCTCGCTGACAGA 59.628 43.478 6.65 0.00 0.00 3.41
508 509 4.034858 CACATAATTTGCTCGCTGACAGAT 59.965 41.667 6.65 0.00 0.00 2.90
509 510 4.034858 ACATAATTTGCTCGCTGACAGATG 59.965 41.667 6.65 0.00 0.00 2.90
510 511 1.376543 ATTTGCTCGCTGACAGATGG 58.623 50.000 6.65 0.00 0.00 3.51
512 513 0.390340 TTGCTCGCTGACAGATGGAC 60.390 55.000 6.65 0.00 0.00 4.02
513 514 1.253593 TGCTCGCTGACAGATGGACT 61.254 55.000 6.65 0.00 0.00 3.85
537 538 2.556286 GGGTCAAGAGCCTTTTCGG 58.444 57.895 10.90 0.00 45.14 4.30
538 539 0.960861 GGGTCAAGAGCCTTTTCGGG 60.961 60.000 10.90 0.00 45.14 5.14
540 541 1.443802 GTCAAGAGCCTTTTCGGGAG 58.556 55.000 0.00 0.00 0.00 4.30
541 542 1.002087 GTCAAGAGCCTTTTCGGGAGA 59.998 52.381 0.00 0.00 0.00 3.71
583 584 7.820044 TTTTTCACAAAATAACAGGACACAC 57.180 32.000 0.00 0.00 0.00 3.82
584 585 4.804608 TCACAAAATAACAGGACACACG 57.195 40.909 0.00 0.00 0.00 4.49
585 586 3.002862 TCACAAAATAACAGGACACACGC 59.997 43.478 0.00 0.00 0.00 5.34
586 587 2.292292 ACAAAATAACAGGACACACGCC 59.708 45.455 0.00 0.00 0.00 5.68
587 588 1.530323 AAATAACAGGACACACGCCC 58.470 50.000 0.00 0.00 0.00 6.13
589 590 1.563924 ATAACAGGACACACGCCCTA 58.436 50.000 0.00 0.00 0.00 3.53
590 591 1.563924 TAACAGGACACACGCCCTAT 58.436 50.000 0.00 0.00 0.00 2.57
591 592 0.249398 AACAGGACACACGCCCTATC 59.751 55.000 0.00 0.00 0.00 2.08
592 593 0.614979 ACAGGACACACGCCCTATCT 60.615 55.000 0.00 0.00 0.00 1.98
593 594 0.103208 CAGGACACACGCCCTATCTC 59.897 60.000 0.00 0.00 0.00 2.75
595 596 1.214673 AGGACACACGCCCTATCTCTA 59.785 52.381 0.00 0.00 0.00 2.43
596 597 1.337387 GGACACACGCCCTATCTCTAC 59.663 57.143 0.00 0.00 0.00 2.59
597 598 1.337387 GACACACGCCCTATCTCTACC 59.663 57.143 0.00 0.00 0.00 3.18
599 600 0.556747 ACACGCCCTATCTCTACCCT 59.443 55.000 0.00 0.00 0.00 4.34
600 601 1.063114 ACACGCCCTATCTCTACCCTT 60.063 52.381 0.00 0.00 0.00 3.95
601 602 1.614413 CACGCCCTATCTCTACCCTTC 59.386 57.143 0.00 0.00 0.00 3.46
603 604 2.158295 ACGCCCTATCTCTACCCTTCAT 60.158 50.000 0.00 0.00 0.00 2.57
605 606 3.306364 CGCCCTATCTCTACCCTTCATTG 60.306 52.174 0.00 0.00 0.00 2.82
607 608 4.262678 GCCCTATCTCTACCCTTCATTGAC 60.263 50.000 0.00 0.00 0.00 3.18
608 609 5.151454 CCCTATCTCTACCCTTCATTGACT 58.849 45.833 0.00 0.00 0.00 3.41
610 611 5.835819 CCTATCTCTACCCTTCATTGACTGA 59.164 44.000 0.00 0.00 0.00 3.41
611 612 5.606348 ATCTCTACCCTTCATTGACTGAC 57.394 43.478 0.00 0.00 32.17 3.51
612 613 4.416516 TCTCTACCCTTCATTGACTGACA 58.583 43.478 0.00 0.00 32.17 3.58
613 614 4.464244 TCTCTACCCTTCATTGACTGACAG 59.536 45.833 0.00 0.00 32.17 3.51
615 616 1.081892 CCCTTCATTGACTGACAGCG 58.918 55.000 1.25 0.00 32.17 5.18
617 618 1.081892 CTTCATTGACTGACAGCGGG 58.918 55.000 1.25 0.00 32.17 6.13
618 619 0.955428 TTCATTGACTGACAGCGGGC 60.955 55.000 1.25 0.00 32.17 6.13
619 620 2.045926 ATTGACTGACAGCGGGCC 60.046 61.111 1.25 0.00 0.00 5.80
622 623 3.695606 GACTGACAGCGGGCCTGA 61.696 66.667 18.31 0.00 44.64 3.86
623 624 3.005539 ACTGACAGCGGGCCTGAT 61.006 61.111 18.31 5.92 44.64 2.90
625 626 4.783621 TGACAGCGGGCCTGATGC 62.784 66.667 29.56 21.26 44.64 3.91
626 627 4.479993 GACAGCGGGCCTGATGCT 62.480 66.667 29.56 16.53 44.64 3.79
628 629 2.590007 CAGCGGGCCTGATGCTAC 60.590 66.667 18.52 0.00 44.64 3.58
630 631 2.111878 GCGGGCCTGATGCTACAT 59.888 61.111 18.31 0.00 40.92 2.29
631 632 2.256591 GCGGGCCTGATGCTACATG 61.257 63.158 18.31 0.00 40.92 3.21
633 634 0.882042 CGGGCCTGATGCTACATGAC 60.882 60.000 5.28 0.00 40.92 3.06
634 635 0.882042 GGGCCTGATGCTACATGACG 60.882 60.000 0.84 0.00 40.92 4.35
635 636 1.502163 GGCCTGATGCTACATGACGC 61.502 60.000 0.00 1.41 40.92 5.19
636 637 0.811219 GCCTGATGCTACATGACGCA 60.811 55.000 14.14 14.14 40.87 5.24
637 638 0.933097 CCTGATGCTACATGACGCAC 59.067 55.000 14.08 9.77 39.21 5.34
638 639 0.933097 CTGATGCTACATGACGCACC 59.067 55.000 14.08 7.03 39.21 5.01
639 640 0.536724 TGATGCTACATGACGCACCT 59.463 50.000 14.08 2.22 39.21 4.00
640 641 1.754226 TGATGCTACATGACGCACCTA 59.246 47.619 14.08 3.68 39.21 3.08
641 642 2.223805 TGATGCTACATGACGCACCTAG 60.224 50.000 14.08 0.00 39.21 3.02
642 643 1.182667 TGCTACATGACGCACCTAGT 58.817 50.000 0.00 0.00 0.00 2.57
643 644 1.134367 TGCTACATGACGCACCTAGTC 59.866 52.381 0.00 0.00 38.98 2.59
647 648 4.097218 TGACGCACCTAGTCAGCT 57.903 55.556 0.00 0.00 42.91 4.24
650 651 1.595993 GACGCACCTAGTCAGCTCCA 61.596 60.000 0.00 0.00 38.42 3.86
651 652 0.972983 ACGCACCTAGTCAGCTCCAT 60.973 55.000 0.00 0.00 0.00 3.41
652 653 0.529337 CGCACCTAGTCAGCTCCATG 60.529 60.000 0.00 0.00 0.00 3.66
654 655 1.472376 GCACCTAGTCAGCTCCATGTC 60.472 57.143 0.00 0.00 0.00 3.06
655 656 1.137872 CACCTAGTCAGCTCCATGTCC 59.862 57.143 0.00 0.00 0.00 4.02
656 657 0.387202 CCTAGTCAGCTCCATGTCCG 59.613 60.000 0.00 0.00 0.00 4.79
659 660 0.613292 AGTCAGCTCCATGTCCGTCT 60.613 55.000 0.00 0.00 0.00 4.18
661 662 1.683917 GTCAGCTCCATGTCCGTCTAT 59.316 52.381 0.00 0.00 0.00 1.98
662 663 2.885266 GTCAGCTCCATGTCCGTCTATA 59.115 50.000 0.00 0.00 0.00 1.31
663 664 3.318275 GTCAGCTCCATGTCCGTCTATAA 59.682 47.826 0.00 0.00 0.00 0.98
664 665 3.958147 TCAGCTCCATGTCCGTCTATAAA 59.042 43.478 0.00 0.00 0.00 1.40
665 666 4.588951 TCAGCTCCATGTCCGTCTATAAAT 59.411 41.667 0.00 0.00 0.00 1.40
666 667 4.687948 CAGCTCCATGTCCGTCTATAAATG 59.312 45.833 0.00 0.00 0.00 2.32
667 668 3.433615 GCTCCATGTCCGTCTATAAATGC 59.566 47.826 0.00 0.00 0.00 3.56
668 669 4.631131 CTCCATGTCCGTCTATAAATGCA 58.369 43.478 0.00 0.00 0.00 3.96
669 670 5.029807 TCCATGTCCGTCTATAAATGCAA 57.970 39.130 0.00 0.00 0.00 4.08
670 671 5.620206 TCCATGTCCGTCTATAAATGCAAT 58.380 37.500 0.00 0.00 0.00 3.56
671 672 6.061441 TCCATGTCCGTCTATAAATGCAATT 58.939 36.000 0.00 0.00 38.98 2.32
693 694 3.852471 GCATCGTATATGCACGTCAAA 57.148 42.857 5.14 0.00 44.00 2.69
694 695 3.787826 GCATCGTATATGCACGTCAAAG 58.212 45.455 5.14 0.00 44.00 2.77
695 696 3.787826 CATCGTATATGCACGTCAAAGC 58.212 45.455 0.00 0.00 42.51 3.51
696 697 3.159353 TCGTATATGCACGTCAAAGCT 57.841 42.857 0.00 0.00 42.51 3.74
697 698 4.295857 TCGTATATGCACGTCAAAGCTA 57.704 40.909 0.00 0.00 42.51 3.32
698 699 4.674475 TCGTATATGCACGTCAAAGCTAA 58.326 39.130 0.00 0.00 42.51 3.09
699 700 4.738252 TCGTATATGCACGTCAAAGCTAAG 59.262 41.667 0.00 0.00 42.51 2.18
700 701 4.503007 CGTATATGCACGTCAAAGCTAAGT 59.497 41.667 0.00 0.00 37.16 2.24
701 702 5.005394 CGTATATGCACGTCAAAGCTAAGTT 59.995 40.000 0.00 0.00 37.16 2.66
702 703 3.542712 ATGCACGTCAAAGCTAAGTTG 57.457 42.857 0.00 0.00 0.00 3.16
703 704 2.285083 TGCACGTCAAAGCTAAGTTGT 58.715 42.857 0.00 0.00 0.00 3.32
704 705 3.459145 TGCACGTCAAAGCTAAGTTGTA 58.541 40.909 0.00 0.00 0.00 2.41
705 706 3.493129 TGCACGTCAAAGCTAAGTTGTAG 59.507 43.478 0.00 0.00 0.00 2.74
706 707 3.664537 GCACGTCAAAGCTAAGTTGTAGC 60.665 47.826 0.00 0.00 40.67 3.58
707 708 3.493129 CACGTCAAAGCTAAGTTGTAGCA 59.507 43.478 8.00 0.00 42.68 3.49
708 709 3.493503 ACGTCAAAGCTAAGTTGTAGCAC 59.506 43.478 8.00 0.00 42.68 4.40
709 710 3.120649 CGTCAAAGCTAAGTTGTAGCACC 60.121 47.826 8.00 0.00 42.68 5.01
710 711 3.813166 GTCAAAGCTAAGTTGTAGCACCA 59.187 43.478 8.00 0.00 42.68 4.17
711 712 4.065088 TCAAAGCTAAGTTGTAGCACCAG 58.935 43.478 8.00 0.00 42.68 4.00
712 713 3.771577 AAGCTAAGTTGTAGCACCAGT 57.228 42.857 8.00 0.00 42.68 4.00
713 714 3.771577 AGCTAAGTTGTAGCACCAGTT 57.228 42.857 8.00 0.00 42.68 3.16
714 715 3.665190 AGCTAAGTTGTAGCACCAGTTC 58.335 45.455 8.00 0.00 42.68 3.01
715 716 3.071023 AGCTAAGTTGTAGCACCAGTTCA 59.929 43.478 8.00 0.00 42.68 3.18
716 717 3.813166 GCTAAGTTGTAGCACCAGTTCAA 59.187 43.478 0.52 0.00 40.14 2.69
717 718 4.455877 GCTAAGTTGTAGCACCAGTTCAAT 59.544 41.667 0.52 0.00 40.14 2.57
718 719 4.836125 AAGTTGTAGCACCAGTTCAATG 57.164 40.909 0.00 0.00 0.00 2.82
719 720 3.820557 AGTTGTAGCACCAGTTCAATGT 58.179 40.909 0.00 0.00 0.00 2.71
720 721 4.968259 AGTTGTAGCACCAGTTCAATGTA 58.032 39.130 0.00 0.00 0.00 2.29
721 722 5.560724 AGTTGTAGCACCAGTTCAATGTAT 58.439 37.500 0.00 0.00 0.00 2.29
722 723 5.412594 AGTTGTAGCACCAGTTCAATGTATG 59.587 40.000 0.00 0.00 0.00 2.39
723 724 4.905429 TGTAGCACCAGTTCAATGTATGT 58.095 39.130 0.00 0.00 0.00 2.29
724 725 5.312895 TGTAGCACCAGTTCAATGTATGTT 58.687 37.500 0.00 0.00 0.00 2.71
725 726 5.767665 TGTAGCACCAGTTCAATGTATGTTT 59.232 36.000 0.00 0.00 0.00 2.83
726 727 5.789643 AGCACCAGTTCAATGTATGTTTT 57.210 34.783 0.00 0.00 0.00 2.43
727 728 5.531634 AGCACCAGTTCAATGTATGTTTTG 58.468 37.500 0.00 0.00 0.00 2.44
728 729 4.685628 GCACCAGTTCAATGTATGTTTTGG 59.314 41.667 0.00 0.00 33.15 3.28
729 730 5.738783 GCACCAGTTCAATGTATGTTTTGGT 60.739 40.000 0.00 0.00 37.33 3.67
730 731 6.515862 GCACCAGTTCAATGTATGTTTTGGTA 60.516 38.462 0.00 0.00 36.11 3.25
731 732 6.861055 CACCAGTTCAATGTATGTTTTGGTAC 59.139 38.462 0.00 0.00 36.11 3.34
732 733 6.775629 ACCAGTTCAATGTATGTTTTGGTACT 59.224 34.615 0.00 0.00 36.11 2.73
733 734 7.940137 ACCAGTTCAATGTATGTTTTGGTACTA 59.060 33.333 0.00 0.00 36.11 1.82
734 735 8.788806 CCAGTTCAATGTATGTTTTGGTACTAA 58.211 33.333 0.00 0.00 0.00 2.24
739 740 9.562408 TCAATGTATGTTTTGGTACTAAAGTGA 57.438 29.630 4.49 0.00 0.00 3.41
765 766 6.463995 TTTTCATGTCAAGTTTTAGCACCT 57.536 33.333 0.00 0.00 0.00 4.00
766 767 5.437289 TTCATGTCAAGTTTTAGCACCTG 57.563 39.130 0.00 0.00 0.00 4.00
767 768 4.460263 TCATGTCAAGTTTTAGCACCTGT 58.540 39.130 0.00 0.00 0.00 4.00
768 769 4.275689 TCATGTCAAGTTTTAGCACCTGTG 59.724 41.667 0.00 0.00 0.00 3.66
769 770 2.948979 TGTCAAGTTTTAGCACCTGTGG 59.051 45.455 0.00 0.00 0.00 4.17
770 771 2.949644 GTCAAGTTTTAGCACCTGTGGT 59.050 45.455 7.21 7.21 44.31 4.16
783 784 4.640771 ACCTGTGGTGTAATTGACTCAT 57.359 40.909 0.00 0.00 32.98 2.90
784 785 4.579869 ACCTGTGGTGTAATTGACTCATC 58.420 43.478 0.00 0.00 32.98 2.92
785 786 4.287067 ACCTGTGGTGTAATTGACTCATCT 59.713 41.667 0.00 0.00 32.98 2.90
786 787 5.221925 ACCTGTGGTGTAATTGACTCATCTT 60.222 40.000 0.00 0.00 32.98 2.40
787 788 5.707298 CCTGTGGTGTAATTGACTCATCTTT 59.293 40.000 0.00 0.00 0.00 2.52
788 789 6.207417 CCTGTGGTGTAATTGACTCATCTTTT 59.793 38.462 0.00 0.00 0.00 2.27
789 790 7.255590 CCTGTGGTGTAATTGACTCATCTTTTT 60.256 37.037 0.00 0.00 0.00 1.94
790 791 8.684386 TGTGGTGTAATTGACTCATCTTTTTA 57.316 30.769 0.00 0.00 0.00 1.52
791 792 8.564574 TGTGGTGTAATTGACTCATCTTTTTAC 58.435 33.333 0.00 0.00 0.00 2.01
792 793 8.564574 GTGGTGTAATTGACTCATCTTTTTACA 58.435 33.333 0.00 0.00 0.00 2.41
793 794 8.783093 TGGTGTAATTGACTCATCTTTTTACAG 58.217 33.333 0.00 0.00 31.17 2.74
794 795 8.999431 GGTGTAATTGACTCATCTTTTTACAGA 58.001 33.333 0.00 0.00 31.17 3.41
804 805 6.630444 CATCTTTTTACAGATGGATGAGGG 57.370 41.667 3.17 0.00 44.57 4.30
805 806 5.779241 TCTTTTTACAGATGGATGAGGGT 57.221 39.130 0.00 0.00 0.00 4.34
806 807 5.500234 TCTTTTTACAGATGGATGAGGGTG 58.500 41.667 0.00 0.00 0.00 4.61
807 808 5.250543 TCTTTTTACAGATGGATGAGGGTGA 59.749 40.000 0.00 0.00 0.00 4.02
808 809 4.487714 TTTACAGATGGATGAGGGTGAC 57.512 45.455 0.00 0.00 0.00 3.67
809 810 1.956869 ACAGATGGATGAGGGTGACA 58.043 50.000 0.00 0.00 0.00 3.58
810 811 2.485659 ACAGATGGATGAGGGTGACAT 58.514 47.619 0.00 0.00 0.00 3.06
811 812 2.848694 ACAGATGGATGAGGGTGACATT 59.151 45.455 0.00 0.00 0.00 2.71
812 813 3.267812 ACAGATGGATGAGGGTGACATTT 59.732 43.478 0.00 0.00 0.00 2.32
813 814 3.881688 CAGATGGATGAGGGTGACATTTC 59.118 47.826 0.00 0.00 0.00 2.17
814 815 2.806945 TGGATGAGGGTGACATTTCC 57.193 50.000 0.00 0.00 0.00 3.13
815 816 1.065491 TGGATGAGGGTGACATTTCCG 60.065 52.381 0.00 0.00 31.58 4.30
816 817 1.017387 GATGAGGGTGACATTTCCGC 58.983 55.000 0.00 0.00 0.00 5.54
817 818 0.394352 ATGAGGGTGACATTTCCGCC 60.394 55.000 0.00 0.00 0.00 6.13
820 821 4.089105 GGTGACATTTCCGCCCAA 57.911 55.556 0.00 0.00 0.00 4.12
821 822 2.346597 GGTGACATTTCCGCCCAAA 58.653 52.632 0.00 0.00 0.00 3.28
822 823 0.676736 GGTGACATTTCCGCCCAAAA 59.323 50.000 0.00 0.00 0.00 2.44
823 824 1.275010 GGTGACATTTCCGCCCAAAAT 59.725 47.619 0.00 0.00 0.00 1.82
824 825 2.289382 GGTGACATTTCCGCCCAAAATT 60.289 45.455 0.00 0.00 0.00 1.82
825 826 2.736192 GTGACATTTCCGCCCAAAATTG 59.264 45.455 0.00 0.00 0.00 2.32
826 827 2.630098 TGACATTTCCGCCCAAAATTGA 59.370 40.909 0.00 0.00 0.00 2.57
827 828 2.993220 GACATTTCCGCCCAAAATTGAC 59.007 45.455 0.00 0.00 0.00 3.18
828 829 2.289382 ACATTTCCGCCCAAAATTGACC 60.289 45.455 0.00 0.00 0.00 4.02
829 830 0.682292 TTTCCGCCCAAAATTGACCC 59.318 50.000 0.00 0.00 0.00 4.46
830 831 1.528292 TTCCGCCCAAAATTGACCCG 61.528 55.000 0.00 0.00 0.00 5.28
831 832 2.272447 CCGCCCAAAATTGACCCGT 61.272 57.895 0.00 0.00 0.00 5.28
832 833 1.663173 CGCCCAAAATTGACCCGTT 59.337 52.632 0.00 0.00 0.00 4.44
833 834 0.665972 CGCCCAAAATTGACCCGTTG 60.666 55.000 0.00 0.00 0.00 4.10
834 835 0.676736 GCCCAAAATTGACCCGTTGA 59.323 50.000 0.00 0.00 0.00 3.18
835 836 1.069358 GCCCAAAATTGACCCGTTGAA 59.931 47.619 0.00 0.00 0.00 2.69
836 837 2.483889 GCCCAAAATTGACCCGTTGAAA 60.484 45.455 0.00 0.00 0.00 2.69
837 838 3.798202 CCCAAAATTGACCCGTTGAAAA 58.202 40.909 0.00 0.00 0.00 2.29
838 839 3.558006 CCCAAAATTGACCCGTTGAAAAC 59.442 43.478 0.00 0.00 45.31 2.43
839 840 4.438148 CCAAAATTGACCCGTTGAAAACT 58.562 39.130 0.00 0.00 46.99 2.66
840 841 4.873259 CCAAAATTGACCCGTTGAAAACTT 59.127 37.500 0.00 0.00 46.99 2.66
841 842 5.220567 CCAAAATTGACCCGTTGAAAACTTG 60.221 40.000 0.00 0.00 46.99 3.16
842 843 4.993029 AATTGACCCGTTGAAAACTTGA 57.007 36.364 0.00 0.00 46.99 3.02
843 844 4.993029 ATTGACCCGTTGAAAACTTGAA 57.007 36.364 0.00 0.00 46.99 2.69
844 845 4.785511 TTGACCCGTTGAAAACTTGAAA 57.214 36.364 0.00 0.00 46.99 2.69
845 846 4.993029 TGACCCGTTGAAAACTTGAAAT 57.007 36.364 0.00 0.00 46.99 2.17
846 847 4.927422 TGACCCGTTGAAAACTTGAAATC 58.073 39.130 0.00 0.00 46.99 2.17
847 848 3.959943 ACCCGTTGAAAACTTGAAATCG 58.040 40.909 0.00 0.00 46.99 3.34
848 849 3.243267 ACCCGTTGAAAACTTGAAATCGG 60.243 43.478 0.00 0.00 46.99 4.18
849 850 2.724174 CCGTTGAAAACTTGAAATCGGC 59.276 45.455 0.00 0.00 46.99 5.54
850 851 2.400408 CGTTGAAAACTTGAAATCGGCG 59.600 45.455 0.00 0.00 46.99 6.46
851 852 2.044888 TGAAAACTTGAAATCGGCGC 57.955 45.000 0.00 0.00 0.00 6.53
852 853 1.335182 TGAAAACTTGAAATCGGCGCA 59.665 42.857 10.83 0.00 0.00 6.09
853 854 1.713932 GAAAACTTGAAATCGGCGCAC 59.286 47.619 10.83 0.00 0.00 5.34
854 855 0.385473 AAACTTGAAATCGGCGCACG 60.385 50.000 10.83 11.16 46.11 5.34
855 856 2.098298 CTTGAAATCGGCGCACGG 59.902 61.111 10.83 0.00 44.45 4.94
856 857 4.096558 TTGAAATCGGCGCACGGC 62.097 61.111 10.83 6.52 44.45 5.68
858 859 4.223964 GAAATCGGCGCACGGCTC 62.224 66.667 10.83 4.81 44.45 4.70
872 873 2.753446 GCTCCTTGCCTGGGAAGC 60.753 66.667 21.23 8.48 35.15 3.86
873 874 2.759114 CTCCTTGCCTGGGAAGCA 59.241 61.111 21.23 6.93 38.81 3.91
874 875 1.676967 CTCCTTGCCTGGGAAGCAC 60.677 63.158 21.23 0.00 40.69 4.40
875 876 2.677875 CCTTGCCTGGGAAGCACC 60.678 66.667 21.23 0.00 40.69 5.01
895 896 4.778415 CGACGCCACTCTGTCCGG 62.778 72.222 0.00 0.00 0.00 5.14
896 897 3.681835 GACGCCACTCTGTCCGGT 61.682 66.667 0.00 0.00 0.00 5.28
897 898 2.282674 ACGCCACTCTGTCCGGTA 60.283 61.111 0.00 0.00 0.00 4.02
900 901 1.384989 CGCCACTCTGTCCGGTATCT 61.385 60.000 0.00 0.00 0.00 1.98
908 909 4.339814 ACTCTGTCCGGTATCTCATCTTTC 59.660 45.833 0.00 0.00 0.00 2.62
1046 1241 2.359478 GCACGTAACCCCCAGTGG 60.359 66.667 0.63 0.63 35.35 4.00
1117 1324 7.865706 ACCCAAAGTATTGCAGAGTTATTAG 57.134 36.000 0.00 0.00 35.10 1.73
1325 1532 2.370445 CCAGTCCCCGGAGCAGATT 61.370 63.158 0.73 0.00 0.00 2.40
1329 1536 1.612146 TCCCCGGAGCAGATTGTGA 60.612 57.895 0.73 0.00 0.00 3.58
1364 1571 4.849329 CTCGAGGTACACGGCGCC 62.849 72.222 19.07 19.07 43.87 6.53
1475 1682 4.752594 GCCAGGGAGGTGGGGGTA 62.753 72.222 0.00 0.00 40.61 3.69
1519 1726 3.068881 CGGGTTCCTGGAGCTTCA 58.931 61.111 10.49 0.00 0.00 3.02
1671 2541 2.362503 ACGATGCTCTCCGGGACA 60.363 61.111 0.00 0.00 0.00 4.02
1727 2597 1.130054 TGAAGAGCTGCCACCTCCTT 61.130 55.000 0.00 0.00 0.00 3.36
1733 2603 0.035056 GCTGCCACCTCCTTGTGTAT 60.035 55.000 0.00 0.00 34.35 2.29
1746 2616 1.188871 TGTGTATGTGAGGGTCGCCA 61.189 55.000 0.00 0.00 0.00 5.69
1766 2636 2.442272 GAGAGTCTGCGGGGCCTA 60.442 66.667 0.84 0.00 0.00 3.93
1952 3346 1.601419 CGTACCTGACCCACATCGGT 61.601 60.000 0.00 0.00 39.49 4.69
2064 3458 1.001974 TGGGCATGCTGGTACGATATC 59.998 52.381 18.92 0.00 0.00 1.63
2088 3492 3.508845 ACTTGCTCTTGCCTAGGAAAA 57.491 42.857 14.75 4.98 38.71 2.29
2095 3499 4.379918 GCTCTTGCCTAGGAAAACAATCAC 60.380 45.833 14.75 0.00 0.00 3.06
2096 3500 4.724399 TCTTGCCTAGGAAAACAATCACA 58.276 39.130 14.75 0.00 0.00 3.58
2099 3503 3.181434 TGCCTAGGAAAACAATCACAGGT 60.181 43.478 14.75 0.00 0.00 4.00
2100 3504 3.191371 GCCTAGGAAAACAATCACAGGTG 59.809 47.826 14.75 0.00 0.00 4.00
2101 3505 4.651778 CCTAGGAAAACAATCACAGGTGA 58.348 43.478 1.05 4.37 44.59 4.02
2124 4935 9.095065 GTGATTAACTGACGGTGTCTTTTATAT 57.905 33.333 0.00 0.00 33.15 0.86
2184 4999 0.177373 GTGTGGATACCCCGAACCTC 59.823 60.000 0.00 0.00 37.93 3.85
2457 5306 1.362355 GTGCTGGTTCCCCAAAACG 59.638 57.895 0.00 0.00 41.27 3.60
2481 5330 2.804647 TGTCTTACATGGTATCACGCG 58.195 47.619 3.53 3.53 0.00 6.01
3289 6138 1.301401 CCGGCCTTGTTGTCTTCGA 60.301 57.895 0.00 0.00 0.00 3.71
3379 6228 1.285950 CACTCCGTCGTCAGCTTGA 59.714 57.895 0.00 0.00 0.00 3.02
3404 6253 1.762370 TGTCAGAAGCTTGACTCCACA 59.238 47.619 17.26 6.32 46.00 4.17
3478 6327 1.681327 GACAGCCCCTCACCGACTA 60.681 63.158 0.00 0.00 0.00 2.59
4118 6967 4.111916 GTCAAGCATCTCTTCTCACTAGC 58.888 47.826 0.00 0.00 31.27 3.42
4562 7411 8.190784 CCTTTAGAACTTGTGTTTTCAGATGTT 58.809 33.333 0.00 0.00 41.56 2.71
4639 7488 5.529791 TGATGCTTATAGTCGCTTTACCTC 58.470 41.667 0.00 0.00 0.00 3.85
4667 7516 9.274065 CTTTACCTTATTAAACGCAAATCTGAC 57.726 33.333 0.00 0.00 0.00 3.51
4674 7523 4.539509 AAACGCAAATCTGACGTGTTTA 57.460 36.364 0.00 0.00 40.50 2.01
5059 8003 2.627699 CAAGGTATTTGGGTGTGCTTGT 59.372 45.455 0.00 0.00 32.95 3.16
5109 8053 3.123621 CGCAAGCTTGAGTTTCGTTCTAT 59.876 43.478 30.39 0.00 0.00 1.98
6205 9150 1.355796 CGGTTTTCGGCAGCGTCATA 61.356 55.000 0.00 0.00 34.75 2.15
6607 9637 3.067883 CAGCTCTTCTCAGTATGCTGCTA 59.932 47.826 5.85 0.00 42.29 3.49
6618 9648 5.052481 CAGTATGCTGCTAATGCTCTTGTA 58.948 41.667 0.00 0.00 40.48 2.41
6762 9793 1.780503 TACAGAGAGCTGGCATGCTA 58.219 50.000 18.92 11.28 46.60 3.49
6985 10016 3.308530 GCTGCTGTTAAACGCATTCTTT 58.691 40.909 0.00 0.00 35.32 2.52
7436 10467 9.606631 GTTTATCTCATCTAAGGATCAACTTGT 57.393 33.333 0.00 0.00 32.02 3.16
7806 10837 0.834612 ACCACCTGACGTTCCTCAAA 59.165 50.000 0.00 0.00 0.00 2.69
7922 10961 3.236003 AAGACGTGGGAACTCCGGC 62.236 63.158 0.00 0.00 38.76 6.13
8171 11212 6.568869 TGTATTTTGGGTCAGTCACTTTTTG 58.431 36.000 0.00 0.00 0.00 2.44
8713 11858 4.771590 AACATGCATGAACACGAATCTT 57.228 36.364 32.75 9.72 0.00 2.40
8727 11872 7.615582 ACACGAATCTTCAACATACATGATT 57.384 32.000 0.00 0.00 0.00 2.57
8734 11879 6.337356 TCTTCAACATACATGATTGACGCTA 58.663 36.000 0.00 0.00 32.05 4.26
8780 11925 6.258727 CGTGCATGGTAGATATGTTTTTCTCT 59.741 38.462 0.00 0.00 0.00 3.10
8782 11927 8.768955 GTGCATGGTAGATATGTTTTTCTCTAG 58.231 37.037 0.00 0.00 0.00 2.43
8971 12134 8.380644 CGTTTGTATAAGTCTTTAGTGATGGTG 58.619 37.037 0.00 0.00 0.00 4.17
9187 12365 7.976175 CCAGCCCTTTATGAAGAAAGAAAATAC 59.024 37.037 0.00 0.00 38.48 1.89
9244 12423 9.734984 TTTCTAGGTAAGAATGAAACCCTTTAG 57.265 33.333 0.00 0.00 43.75 1.85
9248 12427 7.532199 AGGTAAGAATGAAACCCTTTAGGAAA 58.468 34.615 0.00 0.00 39.89 3.13
9366 12569 3.260380 TGGAACAATGGCACCATTTAAGG 59.740 43.478 12.25 4.28 43.32 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 8.263940 TCACAGTTCTAACAAAATACCTATGC 57.736 34.615 0.00 0.00 0.00 3.14
36 37 9.574516 AATCTTCACAGTTCTAACAAAATACCT 57.425 29.630 0.00 0.00 0.00 3.08
44 45 9.944376 AGCTTATAAATCTTCACAGTTCTAACA 57.056 29.630 0.00 0.00 0.00 2.41
140 141 9.665719 AAACAAATCTTCACAGTTTTACCAAAT 57.334 25.926 0.00 0.00 0.00 2.32
141 142 9.145865 GAAACAAATCTTCACAGTTTTACCAAA 57.854 29.630 0.00 0.00 33.04 3.28
142 143 8.527810 AGAAACAAATCTTCACAGTTTTACCAA 58.472 29.630 0.00 0.00 33.04 3.67
143 144 8.062065 AGAAACAAATCTTCACAGTTTTACCA 57.938 30.769 0.00 0.00 33.04 3.25
176 177 9.626045 GCTTGCATAAGTTTAGAATGTTTAAGT 57.374 29.630 0.00 0.00 36.27 2.24
177 178 9.624697 TGCTTGCATAAGTTTAGAATGTTTAAG 57.375 29.630 0.00 0.00 36.27 1.85
180 181 9.492973 AAATGCTTGCATAAGTTTAGAATGTTT 57.507 25.926 8.61 0.00 36.27 2.83
226 227 9.844790 CATGTGACATGCTTTAAGATTTTTCTA 57.155 29.630 13.15 0.00 0.00 2.10
229 230 9.715121 AATCATGTGACATGCTTTAAGATTTTT 57.285 25.926 20.23 0.00 0.00 1.94
301 302 9.083080 GCAGTGTTACTTATTTCAACAAAAACT 57.917 29.630 0.00 0.00 34.20 2.66
304 305 8.988064 TTGCAGTGTTACTTATTTCAACAAAA 57.012 26.923 0.00 0.00 34.20 2.44
305 306 8.988064 TTTGCAGTGTTACTTATTTCAACAAA 57.012 26.923 0.00 0.00 34.20 2.83
306 307 8.988064 TTTTGCAGTGTTACTTATTTCAACAA 57.012 26.923 0.00 0.00 34.20 2.83
315 316 9.005777 CCCTAAACTATTTTGCAGTGTTACTTA 57.994 33.333 0.00 0.00 0.00 2.24
316 317 7.504574 ACCCTAAACTATTTTGCAGTGTTACTT 59.495 33.333 0.00 0.00 0.00 2.24
317 318 7.002276 ACCCTAAACTATTTTGCAGTGTTACT 58.998 34.615 0.00 0.00 0.00 2.24
318 319 7.174426 AGACCCTAAACTATTTTGCAGTGTTAC 59.826 37.037 0.00 0.00 0.00 2.50
319 320 7.228590 AGACCCTAAACTATTTTGCAGTGTTA 58.771 34.615 0.00 0.00 0.00 2.41
320 321 6.068670 AGACCCTAAACTATTTTGCAGTGTT 58.931 36.000 0.00 0.00 0.00 3.32
321 322 5.631119 AGACCCTAAACTATTTTGCAGTGT 58.369 37.500 0.00 0.00 0.00 3.55
323 324 5.222048 TGGAGACCCTAAACTATTTTGCAGT 60.222 40.000 0.00 0.00 0.00 4.40
324 325 5.253330 TGGAGACCCTAAACTATTTTGCAG 58.747 41.667 0.00 0.00 0.00 4.41
325 326 5.249780 TGGAGACCCTAAACTATTTTGCA 57.750 39.130 0.00 0.00 0.00 4.08
326 327 4.096532 GCTGGAGACCCTAAACTATTTTGC 59.903 45.833 0.00 0.00 0.00 3.68
327 328 5.501156 AGCTGGAGACCCTAAACTATTTTG 58.499 41.667 0.00 0.00 0.00 2.44
328 329 5.780958 AGCTGGAGACCCTAAACTATTTT 57.219 39.130 0.00 0.00 0.00 1.82
329 330 5.163290 GCTAGCTGGAGACCCTAAACTATTT 60.163 44.000 7.70 0.00 0.00 1.40
330 331 4.345547 GCTAGCTGGAGACCCTAAACTATT 59.654 45.833 7.70 0.00 0.00 1.73
331 332 3.898741 GCTAGCTGGAGACCCTAAACTAT 59.101 47.826 7.70 0.00 0.00 2.12
332 333 3.052793 AGCTAGCTGGAGACCCTAAACTA 60.053 47.826 18.57 0.00 0.00 2.24
333 334 2.112190 GCTAGCTGGAGACCCTAAACT 58.888 52.381 7.70 0.00 0.00 2.66
334 335 2.112190 AGCTAGCTGGAGACCCTAAAC 58.888 52.381 18.57 0.00 0.00 2.01
335 336 2.552093 AGCTAGCTGGAGACCCTAAA 57.448 50.000 18.57 0.00 0.00 1.85
337 338 3.567397 CTTAAGCTAGCTGGAGACCCTA 58.433 50.000 20.16 0.65 0.00 3.53
338 339 2.393646 CTTAAGCTAGCTGGAGACCCT 58.606 52.381 20.16 1.78 0.00 4.34
339 340 1.414550 CCTTAAGCTAGCTGGAGACCC 59.585 57.143 20.16 0.00 0.00 4.46
340 341 2.101750 GTCCTTAAGCTAGCTGGAGACC 59.898 54.545 20.16 5.53 0.00 3.85
341 342 2.223618 CGTCCTTAAGCTAGCTGGAGAC 60.224 54.545 20.16 19.90 0.00 3.36
344 345 0.460311 GCGTCCTTAAGCTAGCTGGA 59.540 55.000 20.16 17.92 0.00 3.86
346 347 1.863454 CATGCGTCCTTAAGCTAGCTG 59.137 52.381 20.16 5.64 0.00 4.24
347 348 1.202580 CCATGCGTCCTTAAGCTAGCT 60.203 52.381 12.68 12.68 0.00 3.32
348 349 1.202533 TCCATGCGTCCTTAAGCTAGC 60.203 52.381 6.62 6.62 0.00 3.42
350 351 6.791867 ATATATCCATGCGTCCTTAAGCTA 57.208 37.500 0.00 0.00 0.00 3.32
352 353 7.519008 GCATTATATATCCATGCGTCCTTAAGC 60.519 40.741 11.98 0.00 34.37 3.09
353 354 7.495606 TGCATTATATATCCATGCGTCCTTAAG 59.504 37.037 18.37 0.00 45.33 1.85
354 355 7.279981 GTGCATTATATATCCATGCGTCCTTAA 59.720 37.037 18.37 3.82 45.33 1.85
355 356 6.761242 GTGCATTATATATCCATGCGTCCTTA 59.239 38.462 18.37 4.33 45.33 2.69
358 359 4.875536 TGTGCATTATATATCCATGCGTCC 59.124 41.667 18.37 12.30 45.33 4.79
359 360 6.609237 ATGTGCATTATATATCCATGCGTC 57.391 37.500 18.37 15.29 45.33 5.19
360 361 7.252708 CAAATGTGCATTATATATCCATGCGT 58.747 34.615 18.37 9.25 45.33 5.24
361 362 7.673810 CAAATGTGCATTATATATCCATGCG 57.326 36.000 18.37 5.90 45.33 4.73
378 379 1.535028 TCTGGTGTAAGCGCAAATGTG 59.465 47.619 11.47 0.00 36.92 3.21
380 381 2.987413 TTCTGGTGTAAGCGCAAATG 57.013 45.000 11.47 0.00 36.92 2.32
381 382 3.317993 AGTTTTCTGGTGTAAGCGCAAAT 59.682 39.130 11.47 0.00 36.92 2.32
382 383 2.685897 AGTTTTCTGGTGTAAGCGCAAA 59.314 40.909 11.47 0.00 36.92 3.68
383 384 2.032799 CAGTTTTCTGGTGTAAGCGCAA 59.967 45.455 11.47 0.00 43.61 4.85
384 385 1.601903 CAGTTTTCTGGTGTAAGCGCA 59.398 47.619 11.47 0.00 43.61 6.09
397 398 5.296748 ACCAATGCACCAATAACAGTTTTC 58.703 37.500 0.00 0.00 0.00 2.29
398 399 5.289083 ACCAATGCACCAATAACAGTTTT 57.711 34.783 0.00 0.00 0.00 2.43
399 400 4.953940 ACCAATGCACCAATAACAGTTT 57.046 36.364 0.00 0.00 0.00 2.66
400 401 4.953940 AACCAATGCACCAATAACAGTT 57.046 36.364 0.00 0.00 0.00 3.16
401 402 4.462483 CCTAACCAATGCACCAATAACAGT 59.538 41.667 0.00 0.00 0.00 3.55
402 403 4.677779 GCCTAACCAATGCACCAATAACAG 60.678 45.833 0.00 0.00 0.00 3.16
404 405 3.194542 TGCCTAACCAATGCACCAATAAC 59.805 43.478 0.00 0.00 0.00 1.89
405 406 3.435275 TGCCTAACCAATGCACCAATAA 58.565 40.909 0.00 0.00 0.00 1.40
406 407 3.093057 TGCCTAACCAATGCACCAATA 57.907 42.857 0.00 0.00 0.00 1.90
407 408 1.935799 TGCCTAACCAATGCACCAAT 58.064 45.000 0.00 0.00 0.00 3.16
410 411 0.179103 GCATGCCTAACCAATGCACC 60.179 55.000 6.36 0.00 37.92 5.01
412 413 1.808546 CGCATGCCTAACCAATGCA 59.191 52.632 13.15 0.00 38.07 3.96
413 414 1.589727 GCGCATGCCTAACCAATGC 60.590 57.895 13.15 2.04 33.98 3.56
414 415 1.298563 CGCGCATGCCTAACCAATG 60.299 57.895 13.15 0.00 38.08 2.82
416 417 3.809775 GCGCGCATGCCTAACCAA 61.810 61.111 29.10 0.00 38.08 3.67
431 432 3.386867 GATTTGCAGCGTGGAGGCG 62.387 63.158 0.00 0.00 38.18 5.52
432 433 2.334946 TGATTTGCAGCGTGGAGGC 61.335 57.895 0.00 0.00 0.00 4.70
433 434 1.503542 GTGATTTGCAGCGTGGAGG 59.496 57.895 0.00 0.00 0.00 4.30
435 436 2.324330 CCGTGATTTGCAGCGTGGA 61.324 57.895 0.00 0.00 0.00 4.02
436 437 2.176546 CCGTGATTTGCAGCGTGG 59.823 61.111 0.00 0.00 0.00 4.94
437 438 2.128853 AACCCGTGATTTGCAGCGTG 62.129 55.000 0.00 0.00 0.00 5.34
439 440 1.154225 GAACCCGTGATTTGCAGCG 60.154 57.895 0.00 0.00 0.00 5.18
440 441 0.313672 TTGAACCCGTGATTTGCAGC 59.686 50.000 0.00 0.00 0.00 5.25
441 442 2.791383 TTTGAACCCGTGATTTGCAG 57.209 45.000 0.00 0.00 0.00 4.41
443 444 2.131972 GGTTTTGAACCCGTGATTTGC 58.868 47.619 0.00 0.00 46.12 3.68
454 455 0.038618 GTGGCCGATGGGTTTTGAAC 60.039 55.000 0.00 0.00 34.97 3.18
455 456 0.468214 TGTGGCCGATGGGTTTTGAA 60.468 50.000 0.00 0.00 34.97 2.69
456 457 0.468214 TTGTGGCCGATGGGTTTTGA 60.468 50.000 0.00 0.00 34.97 2.69
457 458 0.607620 ATTGTGGCCGATGGGTTTTG 59.392 50.000 0.00 0.00 34.97 2.44
461 462 2.223803 TTAAATTGTGGCCGATGGGT 57.776 45.000 0.00 0.00 34.97 4.51
462 463 3.817709 AATTAAATTGTGGCCGATGGG 57.182 42.857 0.00 0.00 0.00 4.00
464 465 5.636965 TGTGAAAATTAAATTGTGGCCGATG 59.363 36.000 0.00 0.00 0.00 3.84
466 467 5.201713 TGTGAAAATTAAATTGTGGCCGA 57.798 34.783 0.00 0.00 0.00 5.54
474 475 9.971744 GCGAGCAAATTATGTGAAAATTAAATT 57.028 25.926 0.00 0.00 0.00 1.82
478 479 7.484641 GTCAGCGAGCAAATTATGTGAAAATTA 59.515 33.333 0.00 0.00 0.00 1.40
482 483 4.215185 TGTCAGCGAGCAAATTATGTGAAA 59.785 37.500 0.00 0.00 0.00 2.69
483 484 3.750652 TGTCAGCGAGCAAATTATGTGAA 59.249 39.130 0.00 0.00 0.00 3.18
484 485 3.333804 TGTCAGCGAGCAAATTATGTGA 58.666 40.909 0.00 0.00 0.00 3.58
485 486 3.371898 TCTGTCAGCGAGCAAATTATGTG 59.628 43.478 0.00 0.00 0.00 3.21
487 488 4.524749 CATCTGTCAGCGAGCAAATTATG 58.475 43.478 0.00 0.00 0.00 1.90
488 489 3.562973 CCATCTGTCAGCGAGCAAATTAT 59.437 43.478 0.00 0.00 0.00 1.28
490 491 1.741706 CCATCTGTCAGCGAGCAAATT 59.258 47.619 0.00 0.00 0.00 1.82
491 492 1.065926 TCCATCTGTCAGCGAGCAAAT 60.066 47.619 0.00 0.00 0.00 2.32
494 495 1.216444 GTCCATCTGTCAGCGAGCA 59.784 57.895 0.00 0.00 0.00 4.26
497 498 0.528017 GTCAGTCCATCTGTCAGCGA 59.472 55.000 0.00 0.00 43.97 4.93
500 501 2.419713 CCCATGTCAGTCCATCTGTCAG 60.420 54.545 0.00 0.00 43.04 3.51
501 502 1.556451 CCCATGTCAGTCCATCTGTCA 59.444 52.381 0.00 0.00 43.66 3.58
502 503 1.556911 ACCCATGTCAGTCCATCTGTC 59.443 52.381 0.00 0.00 43.97 3.51
503 504 1.556911 GACCCATGTCAGTCCATCTGT 59.443 52.381 0.00 0.00 43.97 3.41
504 505 1.556451 TGACCCATGTCAGTCCATCTG 59.444 52.381 5.59 0.00 46.40 2.90
505 506 1.956869 TGACCCATGTCAGTCCATCT 58.043 50.000 5.59 0.00 46.40 2.90
514 515 2.206576 AAAGGCTCTTGACCCATGTC 57.793 50.000 0.00 0.00 42.12 3.06
515 516 2.519013 GAAAAGGCTCTTGACCCATGT 58.481 47.619 0.00 0.00 0.00 3.21
516 517 1.470098 CGAAAAGGCTCTTGACCCATG 59.530 52.381 0.00 0.00 0.00 3.66
517 518 1.614317 CCGAAAAGGCTCTTGACCCAT 60.614 52.381 0.00 0.00 0.00 4.00
518 519 0.250727 CCGAAAAGGCTCTTGACCCA 60.251 55.000 0.00 0.00 0.00 4.51
519 520 0.960861 CCCGAAAAGGCTCTTGACCC 60.961 60.000 0.00 0.00 39.21 4.46
520 521 0.036306 TCCCGAAAAGGCTCTTGACC 59.964 55.000 0.00 0.00 39.21 4.02
521 522 1.002087 TCTCCCGAAAAGGCTCTTGAC 59.998 52.381 0.00 0.00 39.21 3.18
522 523 1.348064 TCTCCCGAAAAGGCTCTTGA 58.652 50.000 0.00 0.00 39.21 3.02
523 524 2.185004 TTCTCCCGAAAAGGCTCTTG 57.815 50.000 0.00 0.00 39.21 3.02
524 525 2.951229 TTTCTCCCGAAAAGGCTCTT 57.049 45.000 0.00 0.00 36.26 2.85
525 526 2.951229 TTTTCTCCCGAAAAGGCTCT 57.049 45.000 0.00 0.00 42.51 4.09
560 561 6.030849 CGTGTGTCCTGTTATTTTGTGAAAA 58.969 36.000 0.00 0.00 34.41 2.29
561 562 5.574082 CGTGTGTCCTGTTATTTTGTGAAA 58.426 37.500 0.00 0.00 0.00 2.69
562 563 4.496673 GCGTGTGTCCTGTTATTTTGTGAA 60.497 41.667 0.00 0.00 0.00 3.18
563 564 3.002862 GCGTGTGTCCTGTTATTTTGTGA 59.997 43.478 0.00 0.00 0.00 3.58
564 565 3.296628 GCGTGTGTCCTGTTATTTTGTG 58.703 45.455 0.00 0.00 0.00 3.33
565 566 2.292292 GGCGTGTGTCCTGTTATTTTGT 59.708 45.455 0.00 0.00 0.00 2.83
566 567 2.351350 GGGCGTGTGTCCTGTTATTTTG 60.351 50.000 0.00 0.00 36.72 2.44
567 568 1.883926 GGGCGTGTGTCCTGTTATTTT 59.116 47.619 0.00 0.00 36.72 1.82
568 569 1.530323 GGGCGTGTGTCCTGTTATTT 58.470 50.000 0.00 0.00 36.72 1.40
577 578 1.337387 GGTAGAGATAGGGCGTGTGTC 59.663 57.143 0.00 0.00 0.00 3.67
578 579 1.400737 GGTAGAGATAGGGCGTGTGT 58.599 55.000 0.00 0.00 0.00 3.72
579 580 0.674534 GGGTAGAGATAGGGCGTGTG 59.325 60.000 0.00 0.00 0.00 3.82
580 581 0.556747 AGGGTAGAGATAGGGCGTGT 59.443 55.000 0.00 0.00 0.00 4.49
581 582 1.614413 GAAGGGTAGAGATAGGGCGTG 59.386 57.143 0.00 0.00 0.00 5.34
582 583 1.217183 TGAAGGGTAGAGATAGGGCGT 59.783 52.381 0.00 0.00 0.00 5.68
583 584 1.996798 TGAAGGGTAGAGATAGGGCG 58.003 55.000 0.00 0.00 0.00 6.13
584 585 3.904339 TCAATGAAGGGTAGAGATAGGGC 59.096 47.826 0.00 0.00 0.00 5.19
585 586 5.011533 CAGTCAATGAAGGGTAGAGATAGGG 59.988 48.000 0.00 0.00 0.00 3.53
586 587 5.835819 TCAGTCAATGAAGGGTAGAGATAGG 59.164 44.000 0.00 0.00 34.02 2.57
587 588 6.322456 TGTCAGTCAATGAAGGGTAGAGATAG 59.678 42.308 0.00 0.00 40.43 2.08
589 590 5.026121 TGTCAGTCAATGAAGGGTAGAGAT 58.974 41.667 0.00 0.00 40.43 2.75
590 591 4.416516 TGTCAGTCAATGAAGGGTAGAGA 58.583 43.478 0.00 0.00 40.43 3.10
591 592 4.753233 CTGTCAGTCAATGAAGGGTAGAG 58.247 47.826 0.00 0.00 40.43 2.43
592 593 3.055819 GCTGTCAGTCAATGAAGGGTAGA 60.056 47.826 0.93 0.00 40.43 2.59
593 594 3.265791 GCTGTCAGTCAATGAAGGGTAG 58.734 50.000 0.93 0.00 40.43 3.18
595 596 1.609061 CGCTGTCAGTCAATGAAGGGT 60.609 52.381 0.93 0.00 40.43 4.34
596 597 1.081892 CGCTGTCAGTCAATGAAGGG 58.918 55.000 0.93 0.00 40.43 3.95
597 598 1.081892 CCGCTGTCAGTCAATGAAGG 58.918 55.000 0.93 0.00 40.43 3.46
599 600 0.955428 GCCCGCTGTCAGTCAATGAA 60.955 55.000 0.93 0.00 40.43 2.57
600 601 1.375908 GCCCGCTGTCAGTCAATGA 60.376 57.895 0.93 0.00 34.79 2.57
601 602 2.401766 GGCCCGCTGTCAGTCAATG 61.402 63.158 0.93 0.00 0.00 2.82
603 604 3.241530 AGGCCCGCTGTCAGTCAA 61.242 61.111 0.00 0.00 0.00 3.18
605 606 3.023949 ATCAGGCCCGCTGTCAGTC 62.024 63.158 0.00 0.00 0.00 3.51
607 608 2.513204 CATCAGGCCCGCTGTCAG 60.513 66.667 0.00 0.00 0.00 3.51
608 609 4.783621 GCATCAGGCCCGCTGTCA 62.784 66.667 0.00 0.00 36.11 3.58
610 611 3.083349 TAGCATCAGGCCCGCTGT 61.083 61.111 14.88 0.00 46.50 4.40
611 612 2.590007 GTAGCATCAGGCCCGCTG 60.590 66.667 14.88 1.14 46.50 5.18
612 613 2.446848 ATGTAGCATCAGGCCCGCT 61.447 57.895 0.00 5.35 46.50 5.52
613 614 2.111878 ATGTAGCATCAGGCCCGC 59.888 61.111 0.00 0.00 46.50 6.13
615 616 0.882042 CGTCATGTAGCATCAGGCCC 60.882 60.000 0.00 0.00 46.50 5.80
617 618 0.811219 TGCGTCATGTAGCATCAGGC 60.811 55.000 12.41 0.75 45.30 4.85
618 619 0.933097 GTGCGTCATGTAGCATCAGG 59.067 55.000 17.69 0.00 45.69 3.86
619 620 0.933097 GGTGCGTCATGTAGCATCAG 59.067 55.000 18.56 0.00 45.69 2.90
621 622 2.223829 ACTAGGTGCGTCATGTAGCATC 60.224 50.000 17.69 17.17 45.69 3.91
622 623 1.757118 ACTAGGTGCGTCATGTAGCAT 59.243 47.619 17.69 8.26 45.69 3.79
623 624 1.134367 GACTAGGTGCGTCATGTAGCA 59.866 52.381 12.41 12.41 41.55 3.49
625 626 2.796383 GCTGACTAGGTGCGTCATGTAG 60.796 54.545 0.00 0.00 40.30 2.74
626 627 1.134367 GCTGACTAGGTGCGTCATGTA 59.866 52.381 0.00 0.00 40.30 2.29
628 629 0.174389 AGCTGACTAGGTGCGTCATG 59.826 55.000 0.00 0.00 40.30 3.07
630 631 1.595993 GGAGCTGACTAGGTGCGTCA 61.596 60.000 0.00 0.00 38.94 4.35
631 632 1.139947 GGAGCTGACTAGGTGCGTC 59.860 63.158 0.00 0.00 33.13 5.19
633 634 0.529337 CATGGAGCTGACTAGGTGCG 60.529 60.000 0.00 0.00 44.56 5.34
634 635 0.539051 ACATGGAGCTGACTAGGTGC 59.461 55.000 0.00 0.00 42.33 5.01
635 636 1.137872 GGACATGGAGCTGACTAGGTG 59.862 57.143 0.00 0.00 34.13 4.00
636 637 1.490574 GGACATGGAGCTGACTAGGT 58.509 55.000 0.00 0.00 37.35 3.08
637 638 0.387202 CGGACATGGAGCTGACTAGG 59.613 60.000 0.00 0.00 0.00 3.02
638 639 1.066303 GACGGACATGGAGCTGACTAG 59.934 57.143 0.00 0.00 0.00 2.57
639 640 1.103803 GACGGACATGGAGCTGACTA 58.896 55.000 0.00 0.00 0.00 2.59
640 641 0.613292 AGACGGACATGGAGCTGACT 60.613 55.000 0.00 0.00 0.00 3.41
641 642 1.103803 TAGACGGACATGGAGCTGAC 58.896 55.000 0.00 0.00 0.00 3.51
642 643 2.073252 ATAGACGGACATGGAGCTGA 57.927 50.000 0.00 0.00 0.00 4.26
643 644 4.322080 TTTATAGACGGACATGGAGCTG 57.678 45.455 0.00 0.00 0.00 4.24
645 646 3.433615 GCATTTATAGACGGACATGGAGC 59.566 47.826 0.00 0.00 0.00 4.70
646 647 4.631131 TGCATTTATAGACGGACATGGAG 58.369 43.478 0.00 0.00 0.00 3.86
647 648 4.681074 TGCATTTATAGACGGACATGGA 57.319 40.909 0.00 0.00 0.00 3.41
650 651 6.208644 GCAAATTGCATTTATAGACGGACAT 58.791 36.000 13.73 0.00 44.26 3.06
651 652 5.577835 GCAAATTGCATTTATAGACGGACA 58.422 37.500 13.73 0.00 44.26 4.02
673 674 3.787826 CTTTGACGTGCATATACGATGC 58.212 45.455 5.07 2.55 46.46 3.91
674 675 3.490896 AGCTTTGACGTGCATATACGATG 59.509 43.478 5.07 0.00 46.46 3.84
675 676 3.717707 AGCTTTGACGTGCATATACGAT 58.282 40.909 5.07 0.00 46.46 3.73
676 677 3.159353 AGCTTTGACGTGCATATACGA 57.841 42.857 5.07 0.00 46.46 3.43
678 679 5.968387 ACTTAGCTTTGACGTGCATATAC 57.032 39.130 0.00 0.00 0.00 1.47
679 680 5.872617 ACAACTTAGCTTTGACGTGCATATA 59.127 36.000 0.00 0.00 0.00 0.86
680 681 4.695455 ACAACTTAGCTTTGACGTGCATAT 59.305 37.500 0.00 0.00 0.00 1.78
681 682 4.062293 ACAACTTAGCTTTGACGTGCATA 58.938 39.130 0.00 0.00 0.00 3.14
682 683 2.878406 ACAACTTAGCTTTGACGTGCAT 59.122 40.909 0.00 0.00 0.00 3.96
683 684 2.285083 ACAACTTAGCTTTGACGTGCA 58.715 42.857 0.00 0.00 0.00 4.57
684 685 3.664537 GCTACAACTTAGCTTTGACGTGC 60.665 47.826 0.00 0.00 37.56 5.34
685 686 3.493129 TGCTACAACTTAGCTTTGACGTG 59.507 43.478 0.00 0.00 40.95 4.49
686 687 3.493503 GTGCTACAACTTAGCTTTGACGT 59.506 43.478 3.66 0.00 40.95 4.34
687 688 3.120649 GGTGCTACAACTTAGCTTTGACG 60.121 47.826 3.66 0.00 40.95 4.35
688 689 3.813166 TGGTGCTACAACTTAGCTTTGAC 59.187 43.478 3.66 0.00 40.95 3.18
689 690 4.065088 CTGGTGCTACAACTTAGCTTTGA 58.935 43.478 3.66 0.00 40.95 2.69
690 691 3.815401 ACTGGTGCTACAACTTAGCTTTG 59.185 43.478 0.00 0.00 40.95 2.77
691 692 4.086706 ACTGGTGCTACAACTTAGCTTT 57.913 40.909 0.00 0.00 40.95 3.51
692 693 3.771577 ACTGGTGCTACAACTTAGCTT 57.228 42.857 0.00 0.00 40.95 3.74
693 694 3.071023 TGAACTGGTGCTACAACTTAGCT 59.929 43.478 4.98 0.00 40.95 3.32
694 695 3.399330 TGAACTGGTGCTACAACTTAGC 58.601 45.455 0.00 0.00 40.76 3.09
695 696 5.470098 ACATTGAACTGGTGCTACAACTTAG 59.530 40.000 0.00 0.00 0.00 2.18
696 697 5.373222 ACATTGAACTGGTGCTACAACTTA 58.627 37.500 0.00 0.00 0.00 2.24
697 698 4.207165 ACATTGAACTGGTGCTACAACTT 58.793 39.130 0.00 0.00 0.00 2.66
698 699 3.820557 ACATTGAACTGGTGCTACAACT 58.179 40.909 0.00 0.00 0.00 3.16
699 700 5.181245 ACATACATTGAACTGGTGCTACAAC 59.819 40.000 0.00 0.00 0.00 3.32
700 701 5.312895 ACATACATTGAACTGGTGCTACAA 58.687 37.500 0.00 0.00 0.00 2.41
701 702 4.905429 ACATACATTGAACTGGTGCTACA 58.095 39.130 0.00 0.00 0.00 2.74
702 703 5.880054 AACATACATTGAACTGGTGCTAC 57.120 39.130 0.00 0.00 0.00 3.58
703 704 6.294453 CCAAAACATACATTGAACTGGTGCTA 60.294 38.462 0.00 0.00 0.00 3.49
704 705 5.509501 CCAAAACATACATTGAACTGGTGCT 60.510 40.000 0.00 0.00 0.00 4.40
705 706 4.685628 CCAAAACATACATTGAACTGGTGC 59.314 41.667 0.00 0.00 0.00 5.01
706 707 5.841810 ACCAAAACATACATTGAACTGGTG 58.158 37.500 0.00 0.00 34.65 4.17
707 708 6.775629 AGTACCAAAACATACATTGAACTGGT 59.224 34.615 0.00 0.00 37.48 4.00
708 709 7.214467 AGTACCAAAACATACATTGAACTGG 57.786 36.000 0.00 0.00 0.00 4.00
713 714 9.562408 TCACTTTAGTACCAAAACATACATTGA 57.438 29.630 0.00 0.00 0.00 2.57
741 742 6.756074 CAGGTGCTAAAACTTGACATGAAAAA 59.244 34.615 0.00 0.00 28.98 1.94
742 743 6.127479 ACAGGTGCTAAAACTTGACATGAAAA 60.127 34.615 0.00 0.00 31.92 2.29
743 744 5.359576 ACAGGTGCTAAAACTTGACATGAAA 59.640 36.000 0.00 0.00 31.92 2.69
744 745 4.887071 ACAGGTGCTAAAACTTGACATGAA 59.113 37.500 0.00 0.00 31.92 2.57
745 746 4.275689 CACAGGTGCTAAAACTTGACATGA 59.724 41.667 0.00 0.00 31.92 3.07
746 747 4.539870 CACAGGTGCTAAAACTTGACATG 58.460 43.478 0.00 0.00 31.92 3.21
747 748 3.569701 CCACAGGTGCTAAAACTTGACAT 59.430 43.478 0.00 0.00 31.92 3.06
748 749 2.948979 CCACAGGTGCTAAAACTTGACA 59.051 45.455 0.00 0.00 31.92 3.58
749 750 2.949644 ACCACAGGTGCTAAAACTTGAC 59.050 45.455 0.00 0.00 32.98 3.18
750 751 3.290948 ACCACAGGTGCTAAAACTTGA 57.709 42.857 0.00 0.00 32.98 3.02
762 763 4.287067 AGATGAGTCAATTACACCACAGGT 59.713 41.667 0.00 0.00 35.62 4.00
763 764 4.836825 AGATGAGTCAATTACACCACAGG 58.163 43.478 0.00 0.00 0.00 4.00
764 765 6.808008 AAAGATGAGTCAATTACACCACAG 57.192 37.500 0.00 0.00 0.00 3.66
765 766 7.581213 AAAAAGATGAGTCAATTACACCACA 57.419 32.000 0.00 0.00 0.00 4.17
766 767 8.564574 TGTAAAAAGATGAGTCAATTACACCAC 58.435 33.333 0.00 0.00 30.71 4.16
767 768 8.684386 TGTAAAAAGATGAGTCAATTACACCA 57.316 30.769 0.00 0.00 30.71 4.17
768 769 8.999431 TCTGTAAAAAGATGAGTCAATTACACC 58.001 33.333 0.00 0.00 31.57 4.16
782 783 6.069440 TCACCCTCATCCATCTGTAAAAAGAT 60.069 38.462 0.00 0.00 37.39 2.40
783 784 5.250543 TCACCCTCATCCATCTGTAAAAAGA 59.749 40.000 0.00 0.00 0.00 2.52
784 785 5.355350 GTCACCCTCATCCATCTGTAAAAAG 59.645 44.000 0.00 0.00 0.00 2.27
785 786 5.222027 TGTCACCCTCATCCATCTGTAAAAA 60.222 40.000 0.00 0.00 0.00 1.94
786 787 4.288366 TGTCACCCTCATCCATCTGTAAAA 59.712 41.667 0.00 0.00 0.00 1.52
787 788 3.843619 TGTCACCCTCATCCATCTGTAAA 59.156 43.478 0.00 0.00 0.00 2.01
788 789 3.449918 TGTCACCCTCATCCATCTGTAA 58.550 45.455 0.00 0.00 0.00 2.41
789 790 3.114643 TGTCACCCTCATCCATCTGTA 57.885 47.619 0.00 0.00 0.00 2.74
790 791 1.956869 TGTCACCCTCATCCATCTGT 58.043 50.000 0.00 0.00 0.00 3.41
791 792 3.572632 AATGTCACCCTCATCCATCTG 57.427 47.619 0.00 0.00 0.00 2.90
792 793 3.117738 GGAAATGTCACCCTCATCCATCT 60.118 47.826 0.00 0.00 0.00 2.90
793 794 3.217626 GGAAATGTCACCCTCATCCATC 58.782 50.000 0.00 0.00 0.00 3.51
794 795 2.421952 CGGAAATGTCACCCTCATCCAT 60.422 50.000 0.00 0.00 0.00 3.41
795 796 1.065491 CGGAAATGTCACCCTCATCCA 60.065 52.381 0.00 0.00 0.00 3.41
796 797 1.668419 CGGAAATGTCACCCTCATCC 58.332 55.000 0.00 0.00 0.00 3.51
797 798 1.017387 GCGGAAATGTCACCCTCATC 58.983 55.000 0.00 0.00 0.00 2.92
798 799 0.394352 GGCGGAAATGTCACCCTCAT 60.394 55.000 0.00 0.00 0.00 2.90
799 800 1.002624 GGCGGAAATGTCACCCTCA 60.003 57.895 0.00 0.00 0.00 3.86
800 801 1.749258 GGGCGGAAATGTCACCCTC 60.749 63.158 6.05 0.00 38.24 4.30
801 802 2.075355 TTGGGCGGAAATGTCACCCT 62.075 55.000 13.10 0.00 40.70 4.34
802 803 1.182385 TTTGGGCGGAAATGTCACCC 61.182 55.000 6.31 6.31 40.55 4.61
803 804 0.676736 TTTTGGGCGGAAATGTCACC 59.323 50.000 0.00 0.00 0.00 4.02
804 805 2.736192 CAATTTTGGGCGGAAATGTCAC 59.264 45.455 0.00 0.00 0.00 3.67
805 806 2.630098 TCAATTTTGGGCGGAAATGTCA 59.370 40.909 0.00 0.00 0.00 3.58
806 807 2.993220 GTCAATTTTGGGCGGAAATGTC 59.007 45.455 0.00 0.00 0.00 3.06
807 808 2.289382 GGTCAATTTTGGGCGGAAATGT 60.289 45.455 0.00 0.00 0.00 2.71
808 809 2.345876 GGTCAATTTTGGGCGGAAATG 58.654 47.619 0.00 0.00 0.00 2.32
809 810 1.277842 GGGTCAATTTTGGGCGGAAAT 59.722 47.619 0.00 0.00 0.00 2.17
810 811 0.682292 GGGTCAATTTTGGGCGGAAA 59.318 50.000 0.00 0.00 0.00 3.13
811 812 1.528292 CGGGTCAATTTTGGGCGGAA 61.528 55.000 0.00 0.00 0.00 4.30
812 813 1.974343 CGGGTCAATTTTGGGCGGA 60.974 57.895 0.00 0.00 0.00 5.54
813 814 1.811645 AACGGGTCAATTTTGGGCGG 61.812 55.000 0.00 0.00 0.00 6.13
814 815 0.665972 CAACGGGTCAATTTTGGGCG 60.666 55.000 0.00 0.00 0.00 6.13
815 816 0.676736 TCAACGGGTCAATTTTGGGC 59.323 50.000 0.00 0.00 0.00 5.36
816 817 3.460857 TTTCAACGGGTCAATTTTGGG 57.539 42.857 0.00 0.00 0.00 4.12
817 818 4.438148 AGTTTTCAACGGGTCAATTTTGG 58.562 39.130 0.00 0.00 36.23 3.28
818 819 5.578727 TCAAGTTTTCAACGGGTCAATTTTG 59.421 36.000 0.00 0.00 36.23 2.44
819 820 5.725362 TCAAGTTTTCAACGGGTCAATTTT 58.275 33.333 0.00 0.00 36.23 1.82
820 821 5.331876 TCAAGTTTTCAACGGGTCAATTT 57.668 34.783 0.00 0.00 36.23 1.82
821 822 4.993029 TCAAGTTTTCAACGGGTCAATT 57.007 36.364 0.00 0.00 36.23 2.32
822 823 4.993029 TTCAAGTTTTCAACGGGTCAAT 57.007 36.364 0.00 0.00 36.23 2.57
823 824 4.785511 TTTCAAGTTTTCAACGGGTCAA 57.214 36.364 0.00 0.00 36.23 3.18
824 825 4.496673 CGATTTCAAGTTTTCAACGGGTCA 60.497 41.667 0.00 0.00 36.23 4.02
825 826 3.972502 CGATTTCAAGTTTTCAACGGGTC 59.027 43.478 0.00 0.00 36.23 4.46
826 827 3.243267 CCGATTTCAAGTTTTCAACGGGT 60.243 43.478 0.00 0.00 36.23 5.28
827 828 3.305110 CCGATTTCAAGTTTTCAACGGG 58.695 45.455 0.00 0.00 36.23 5.28
828 829 2.724174 GCCGATTTCAAGTTTTCAACGG 59.276 45.455 0.00 0.00 40.60 4.44
829 830 2.400408 CGCCGATTTCAAGTTTTCAACG 59.600 45.455 0.00 0.00 36.23 4.10
830 831 2.153057 GCGCCGATTTCAAGTTTTCAAC 59.847 45.455 0.00 0.00 0.00 3.18
831 832 2.223595 TGCGCCGATTTCAAGTTTTCAA 60.224 40.909 4.18 0.00 0.00 2.69
832 833 1.335182 TGCGCCGATTTCAAGTTTTCA 59.665 42.857 4.18 0.00 0.00 2.69
833 834 1.713932 GTGCGCCGATTTCAAGTTTTC 59.286 47.619 4.18 0.00 0.00 2.29
834 835 1.766069 GTGCGCCGATTTCAAGTTTT 58.234 45.000 4.18 0.00 0.00 2.43
835 836 0.385473 CGTGCGCCGATTTCAAGTTT 60.385 50.000 4.18 0.00 39.56 2.66
836 837 1.206578 CGTGCGCCGATTTCAAGTT 59.793 52.632 4.18 0.00 39.56 2.66
837 838 2.677003 CCGTGCGCCGATTTCAAGT 61.677 57.895 17.96 0.00 39.56 3.16
838 839 2.098298 CCGTGCGCCGATTTCAAG 59.902 61.111 17.96 0.00 39.56 3.02
839 840 4.096558 GCCGTGCGCCGATTTCAA 62.097 61.111 17.96 0.00 39.56 2.69
841 842 4.223964 GAGCCGTGCGCCGATTTC 62.224 66.667 17.96 9.39 39.56 2.17
855 856 2.753446 GCTTCCCAGGCAAGGAGC 60.753 66.667 0.00 0.58 44.65 4.70
856 857 1.676967 GTGCTTCCCAGGCAAGGAG 60.677 63.158 0.00 0.00 41.54 3.69
857 858 2.436109 GTGCTTCCCAGGCAAGGA 59.564 61.111 0.00 0.00 41.54 3.36
858 859 2.677875 GGTGCTTCCCAGGCAAGG 60.678 66.667 0.00 0.00 41.54 3.61
878 879 4.778415 CCGGACAGAGTGGCGTCG 62.778 72.222 0.00 0.00 32.74 5.12
879 880 1.664321 ATACCGGACAGAGTGGCGTC 61.664 60.000 9.46 0.00 0.00 5.19
880 881 1.664321 GATACCGGACAGAGTGGCGT 61.664 60.000 9.46 0.00 0.00 5.68
881 882 1.065928 GATACCGGACAGAGTGGCG 59.934 63.158 9.46 0.00 0.00 5.69
882 883 0.386113 GAGATACCGGACAGAGTGGC 59.614 60.000 9.46 0.00 0.00 5.01
883 884 1.763968 TGAGATACCGGACAGAGTGG 58.236 55.000 9.46 0.00 0.00 4.00
884 885 3.218453 AGATGAGATACCGGACAGAGTG 58.782 50.000 9.46 0.00 0.00 3.51
885 886 3.586470 AGATGAGATACCGGACAGAGT 57.414 47.619 9.46 0.00 0.00 3.24
886 887 4.261825 GGAAAGATGAGATACCGGACAGAG 60.262 50.000 9.46 0.00 0.00 3.35
887 888 3.637229 GGAAAGATGAGATACCGGACAGA 59.363 47.826 9.46 0.00 0.00 3.41
888 889 3.551046 CGGAAAGATGAGATACCGGACAG 60.551 52.174 9.46 0.00 37.28 3.51
889 890 2.361119 CGGAAAGATGAGATACCGGACA 59.639 50.000 9.46 0.00 37.28 4.02
890 891 2.621998 TCGGAAAGATGAGATACCGGAC 59.378 50.000 9.46 0.00 40.59 4.79
891 892 2.885266 CTCGGAAAGATGAGATACCGGA 59.115 50.000 9.46 0.00 40.59 5.14
892 893 2.623889 ACTCGGAAAGATGAGATACCGG 59.376 50.000 0.00 0.00 40.59 5.28
893 894 3.315470 TGACTCGGAAAGATGAGATACCG 59.685 47.826 0.00 0.00 41.39 4.02
894 895 4.920640 TGACTCGGAAAGATGAGATACC 57.079 45.455 0.00 0.00 36.11 2.73
895 896 7.206687 AGATTTGACTCGGAAAGATGAGATAC 58.793 38.462 0.00 0.00 36.11 2.24
896 897 7.353414 AGATTTGACTCGGAAAGATGAGATA 57.647 36.000 0.00 0.00 36.11 1.98
897 898 6.232581 AGATTTGACTCGGAAAGATGAGAT 57.767 37.500 0.00 0.00 36.11 2.75
900 901 4.393062 GCAAGATTTGACTCGGAAAGATGA 59.607 41.667 0.00 0.00 0.00 2.92
908 909 3.329386 TCTCTTGCAAGATTTGACTCGG 58.671 45.455 28.57 13.98 33.93 4.63
1046 1241 1.239347 GTTGAGCCTTCCAAGTGACC 58.761 55.000 0.00 0.00 0.00 4.02
1117 1324 1.000731 CCTCCTCGGATGATGCTCTTC 59.999 57.143 0.00 0.00 33.16 2.87
1506 1713 2.592993 CCCCGTGAAGCTCCAGGAA 61.593 63.158 0.00 0.00 0.00 3.36
1507 1714 3.003173 CCCCGTGAAGCTCCAGGA 61.003 66.667 0.00 0.00 0.00 3.86
1508 1715 3.003173 TCCCCGTGAAGCTCCAGG 61.003 66.667 0.00 0.00 0.00 4.45
1727 2597 1.188871 TGGCGACCCTCACATACACA 61.189 55.000 0.00 0.00 0.00 3.72
1754 2624 1.531840 GATCTCTAGGCCCCGCAGA 60.532 63.158 0.00 0.00 0.00 4.26
1766 2636 3.456365 AGGCAGCGCACGATCTCT 61.456 61.111 11.47 0.00 0.00 3.10
1952 3346 3.425577 ACTTCGTCGTATTCGGCATAA 57.574 42.857 0.00 0.00 42.21 1.90
2064 3458 1.815003 CCTAGGCAAGAGCAAGTTTGG 59.185 52.381 0.00 0.00 44.61 3.28
2095 3499 2.993899 GACACCGTCAGTTAATCACCTG 59.006 50.000 0.00 0.00 32.09 4.00
2096 3500 2.897969 AGACACCGTCAGTTAATCACCT 59.102 45.455 0.00 0.00 34.60 4.00
2099 3503 9.093970 CATATAAAAGACACCGTCAGTTAATCA 57.906 33.333 0.00 0.00 34.60 2.57
2100 3504 9.309516 TCATATAAAAGACACCGTCAGTTAATC 57.690 33.333 0.00 0.00 34.60 1.75
2101 3505 9.832445 ATCATATAAAAGACACCGTCAGTTAAT 57.168 29.630 0.00 0.00 34.60 1.40
2102 3506 9.309516 GATCATATAAAAGACACCGTCAGTTAA 57.690 33.333 0.00 0.00 34.60 2.01
2103 3507 8.471609 TGATCATATAAAAGACACCGTCAGTTA 58.528 33.333 0.00 0.00 34.60 2.24
2104 3508 7.327975 TGATCATATAAAAGACACCGTCAGTT 58.672 34.615 0.00 0.00 34.60 3.16
2105 3509 6.873997 TGATCATATAAAAGACACCGTCAGT 58.126 36.000 0.00 0.00 34.60 3.41
2106 3510 6.074088 GCTGATCATATAAAAGACACCGTCAG 60.074 42.308 0.00 0.00 34.60 3.51
2107 3511 5.753438 GCTGATCATATAAAAGACACCGTCA 59.247 40.000 0.00 0.00 34.60 4.35
2108 3512 5.753438 TGCTGATCATATAAAAGACACCGTC 59.247 40.000 0.00 0.00 0.00 4.79
2124 4935 3.870274 CTCTTCTTCCATGTGCTGATCA 58.130 45.455 0.00 0.00 0.00 2.92
2457 5306 5.107989 CGCGTGATACCATGTAAGACAATAC 60.108 44.000 0.00 0.00 0.00 1.89
2481 5330 2.869354 CGGAAGCGATCGTAACCTC 58.131 57.895 17.81 6.28 0.00 3.85
3289 6138 0.820871 GGCCTCATGAGACGTCTTCT 59.179 55.000 24.62 7.28 37.23 2.85
3379 6228 3.244044 GGAGTCAAGCTTCTGACACTCTT 60.244 47.826 18.40 0.00 46.81 2.85
3404 6253 3.495100 CCTTGTTGTAGAACTCAGTGGCT 60.495 47.826 4.21 0.00 32.79 4.75
4118 6967 3.474600 CTGAAGACTCCTATTGGCATGG 58.525 50.000 0.00 0.00 0.00 3.66
4562 7411 0.768221 AAGTCTGAGCAGGACCCCAA 60.768 55.000 0.00 0.00 34.56 4.12
4614 7463 6.525629 AGGTAAAGCGACTATAAGCATCAAT 58.474 36.000 0.00 0.00 35.48 2.57
4639 7488 6.964934 AGATTTGCGTTTAATAAGGTAAAGCG 59.035 34.615 0.00 0.00 41.60 4.68
5109 8053 6.293955 GCTATAGCCAAGAAAAACACACTTCA 60.294 38.462 14.13 0.00 34.31 3.02
5371 8315 4.801521 TGATGATGGTGAATCCTCCAAT 57.198 40.909 0.00 0.00 39.16 3.16
6205 9150 4.054359 AGGTGTCCTCATAGTCAAGACT 57.946 45.455 7.96 7.96 45.02 3.24
6607 9637 4.197750 CCAAGAGAGCATACAAGAGCATT 58.802 43.478 0.00 0.00 0.00 3.56
6618 9648 2.803030 AATCAGCACCAAGAGAGCAT 57.197 45.000 0.00 0.00 0.00 3.79
6762 9793 0.681564 TGGTGGTCGGTTTGCACTTT 60.682 50.000 0.00 0.00 0.00 2.66
6985 10016 4.698201 TCAGGGTGAACTGAACATAACA 57.302 40.909 0.00 0.00 44.03 2.41
7436 10467 6.405508 CGGTAAAGGCTTAGTGAAGATGTCTA 60.406 42.308 0.00 0.00 34.25 2.59
7806 10837 0.471211 TCCCTCGGAAGTTCACCACT 60.471 55.000 5.01 0.00 37.30 4.00
7922 10961 1.072173 TGTCCTGGTGTTCATGGTCTG 59.928 52.381 0.00 0.00 0.00 3.51
8171 11212 3.153919 TGTTTTCAACTCCTATGGTGCC 58.846 45.455 0.00 0.00 0.00 5.01
8713 11858 6.976636 TTTAGCGTCAATCATGTATGTTGA 57.023 33.333 0.00 0.00 0.00 3.18
8727 11872 3.802866 TCCATGCATGTATTTAGCGTCA 58.197 40.909 24.58 0.00 0.00 4.35
8734 11879 3.318839 CGGGACATTCCATGCATGTATTT 59.681 43.478 24.58 11.00 38.64 1.40
8811 11956 0.760189 AACAATTGCCTGCACCCAGT 60.760 50.000 5.05 0.00 37.38 4.00
9020 12198 9.883142 TGCAAATTTTTCTTCTTCTTAAAAGGA 57.117 25.926 0.00 0.00 0.00 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.