Multiple sequence alignment - TraesCS3B01G202700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G202700 chr3B 100.000 2525 0 0 1 2525 237097144 237099668 0.000000e+00 4663.0
1 TraesCS3B01G202700 chr3B 74.737 190 40 5 22 209 781884563 781884380 7.490000e-11 78.7
2 TraesCS3B01G202700 chr3D 90.350 1917 105 41 185 2054 160524054 160525937 0.000000e+00 2442.0
3 TraesCS3B01G202700 chr3D 92.199 141 10 1 1 140 160523901 160524041 5.510000e-47 198.0
4 TraesCS3B01G202700 chr3D 76.552 145 24 9 326 465 471101360 471101499 1.250000e-08 71.3
5 TraesCS3B01G202700 chr3A 88.151 1958 159 36 1 1935 186707006 186708913 0.000000e+00 2263.0
6 TraesCS3B01G202700 chr3A 83.761 234 27 10 1801 2027 30445718 30445947 7.080000e-51 211.0
7 TraesCS3B01G202700 chr3A 79.061 277 31 12 1800 2054 674434229 674434500 5.590000e-37 165.0
8 TraesCS3B01G202700 chr4A 79.787 470 57 23 2057 2505 147647317 147646865 8.770000e-80 307.0
9 TraesCS3B01G202700 chr4A 83.691 233 27 10 1802 2027 582812544 582812772 2.550000e-50 209.0
10 TraesCS3B01G202700 chr6A 83.539 243 28 11 1799 2033 73545799 73546037 1.520000e-52 217.0
11 TraesCS3B01G202700 chr6A 83.613 238 25 13 1799 2027 587888005 587888237 7.080000e-51 211.0
12 TraesCS3B01G202700 chr1A 83.051 236 29 10 1801 2030 551575061 551574831 1.180000e-48 204.0
13 TraesCS3B01G202700 chr7A 82.573 241 30 11 1797 2030 24992918 24992683 4.260000e-48 202.0
14 TraesCS3B01G202700 chr2A 82.353 238 30 11 1798 2027 757880629 757880862 1.980000e-46 196.0
15 TraesCS3B01G202700 chr2B 78.495 186 20 17 326 502 104801622 104801448 1.240000e-18 104.0
16 TraesCS3B01G202700 chr2B 74.510 204 42 7 8 209 50763972 50764167 2.080000e-11 80.5
17 TraesCS3B01G202700 chr7B 74.219 256 54 8 8 261 59673998 59673753 2.070000e-16 97.1
18 TraesCS3B01G202700 chr7B 75.490 204 41 6 8 209 217303681 217303877 9.620000e-15 91.6
19 TraesCS3B01G202700 chr2D 75.743 202 44 5 8 209 488223795 488223991 2.070000e-16 97.1
20 TraesCS3B01G202700 chr7D 75.377 199 42 5 8 205 75725713 75725521 3.460000e-14 89.8
21 TraesCS3B01G202700 chr1D 76.042 192 29 10 27 212 475907037 475906857 1.610000e-12 84.2
22 TraesCS3B01G202700 chr6D 77.143 140 26 6 326 465 449180135 449180268 2.690000e-10 76.8
23 TraesCS3B01G202700 chr6D 92.308 39 3 0 178 216 471554743 471554705 3.510000e-04 56.5
24 TraesCS3B01G202700 chrUn 73.239 213 36 17 8 212 28620430 28620231 9.760000e-05 58.4
25 TraesCS3B01G202700 chr5A 92.500 40 3 0 335 374 317983767 317983806 9.760000e-05 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G202700 chr3B 237097144 237099668 2524 False 4663 4663 100.0000 1 2525 1 chr3B.!!$F1 2524
1 TraesCS3B01G202700 chr3D 160523901 160525937 2036 False 1320 2442 91.2745 1 2054 2 chr3D.!!$F2 2053
2 TraesCS3B01G202700 chr3A 186707006 186708913 1907 False 2263 2263 88.1510 1 1935 1 chr3A.!!$F2 1934

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
271 273 0.173481 TTCTTGGAGATGAGGCGACG 59.827 55.0 0.0 0.0 0.0 5.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2248 2317 0.101759 TCCATTACCGTACTCAGCGC 59.898 55.0 0.0 0.0 0.0 5.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 2.535984 CGTTAGACGCATCACTGGAATC 59.464 50.000 0.00 0.00 33.65 2.52
62 63 6.659242 GTGAGAACCTTATTCCATTTTCAGGA 59.341 38.462 0.00 0.00 0.00 3.86
77 78 2.671963 GGAAACCACCACCGCCTC 60.672 66.667 0.00 0.00 0.00 4.70
88 89 0.734253 CACCGCCTCGTCTTCTCAAG 60.734 60.000 0.00 0.00 0.00 3.02
141 143 7.694388 AAAAATCTAAAAACGAAGCAAGACC 57.306 32.000 0.00 0.00 0.00 3.85
148 150 2.269241 GAAGCAAGACCCCTCCCG 59.731 66.667 0.00 0.00 0.00 5.14
211 213 4.816984 TCGGAGAGGAGACGGGCC 62.817 72.222 0.00 0.00 0.00 5.80
229 231 1.372872 CGACGACAGTGCATGTGGA 60.373 57.895 14.69 0.00 44.17 4.02
231 233 1.225855 GACGACAGTGCATGTGGAAA 58.774 50.000 14.69 0.00 44.17 3.13
246 248 2.239907 GTGGAAAGCAGAGGAACCCTAT 59.760 50.000 0.00 0.00 31.76 2.57
271 273 0.173481 TTCTTGGAGATGAGGCGACG 59.827 55.000 0.00 0.00 0.00 5.12
272 274 0.965866 TCTTGGAGATGAGGCGACGT 60.966 55.000 0.00 0.00 0.00 4.34
315 317 3.947132 CTGGGCACGAGCAGGTCTG 62.947 68.421 7.26 0.00 44.61 3.51
367 382 3.347958 TGGCAGTTTTAAAGTTCAGCG 57.652 42.857 0.00 0.00 0.00 5.18
517 533 4.381932 GGCAATTAGGGTCTTTGTTGATGG 60.382 45.833 0.00 0.00 0.00 3.51
526 542 5.639082 GGGTCTTTGTTGATGGCATTTAAAG 59.361 40.000 0.00 10.21 0.00 1.85
553 569 4.355889 AGTTAAATGGACCTAAACAGGGGT 59.644 41.667 0.00 0.00 0.00 4.95
556 572 1.078637 GGACCTAAACAGGGGTCGC 60.079 63.158 6.12 0.00 32.79 5.19
562 578 1.822990 CTAAACAGGGGTCGCACTAGA 59.177 52.381 0.00 0.00 0.00 2.43
565 581 0.681564 ACAGGGGTCGCACTAGAGAG 60.682 60.000 0.00 0.00 0.00 3.20
569 585 1.104577 GGGTCGCACTAGAGAGGGAG 61.105 65.000 0.00 0.00 0.00 4.30
570 586 1.104577 GGTCGCACTAGAGAGGGAGG 61.105 65.000 0.00 0.00 0.00 4.30
574 590 1.408969 GCACTAGAGAGGGAGGGAAG 58.591 60.000 0.00 0.00 0.00 3.46
591 607 3.003763 GAGCGAACCACCTCCCCT 61.004 66.667 0.00 0.00 0.00 4.79
643 697 7.485418 AAAAAGTAATTAAAAGGCAAACGGG 57.515 32.000 0.00 0.00 0.00 5.28
694 748 9.140286 GCTCAAAAACCAAGAAAAATATCCTAC 57.860 33.333 0.00 0.00 0.00 3.18
815 869 2.126502 CCGCCATTTCCGTTGTGC 60.127 61.111 0.00 0.00 0.00 4.57
862 920 3.371166 CCGTGTCATGTATTTACCCCCTT 60.371 47.826 0.00 0.00 0.00 3.95
1171 1229 4.752879 CGGGGCACTACACCACCG 62.753 72.222 0.00 0.00 35.61 4.94
1203 1261 1.878775 GGTGCTGAACATGCAGGTC 59.121 57.895 3.65 0.00 41.41 3.85
1374 1432 1.901650 GCTTCAAGGACGCCTCAACG 61.902 60.000 0.00 0.00 39.50 4.10
1439 1497 2.260481 CGACGAGGAGTTTAGGAAAGC 58.740 52.381 0.00 0.00 0.00 3.51
1443 1501 0.035343 AGGAGTTTAGGAAAGCCGGC 60.035 55.000 21.89 21.89 39.96 6.13
1523 1581 1.938577 CGCCCTCTCAAACATGATCTG 59.061 52.381 0.00 0.00 0.00 2.90
1532 1590 7.815549 CCTCTCAAACATGATCTGATCTCATAG 59.184 40.741 17.82 7.20 32.18 2.23
1535 1593 7.153315 TCAAACATGATCTGATCTCATAGAGC 58.847 38.462 17.82 0.00 32.18 4.09
1552 1610 2.618241 AGAGCTCACATCTCGTCTCATC 59.382 50.000 17.77 0.00 35.79 2.92
1637 1695 2.796031 CGCTGCACACATTGTTGATTTT 59.204 40.909 0.00 0.00 0.00 1.82
1638 1696 3.121261 CGCTGCACACATTGTTGATTTTC 60.121 43.478 0.00 0.00 0.00 2.29
1642 1700 4.118410 GCACACATTGTTGATTTTCCACA 58.882 39.130 0.00 0.00 0.00 4.17
1740 1798 3.701542 GGAAGGGGAGGTGAATTGAAATC 59.298 47.826 0.00 0.00 0.00 2.17
1779 1837 3.574614 ACCGCTGTTATTTTTGTGCATC 58.425 40.909 0.00 0.00 0.00 3.91
1800 1858 6.150809 GCATCTGTGGATCTTTTTCTTCTTCT 59.849 38.462 0.00 0.00 0.00 2.85
1843 1903 7.936301 GCCAAATAGCCCCATTTTTATTATGAA 59.064 33.333 0.00 0.00 0.00 2.57
1873 1942 1.082169 CAATCGCAACACCACACCG 60.082 57.895 0.00 0.00 0.00 4.94
1881 1950 1.064952 CAACACCACACCGTTTTCCTC 59.935 52.381 0.00 0.00 0.00 3.71
1882 1951 0.253610 ACACCACACCGTTTTCCTCA 59.746 50.000 0.00 0.00 0.00 3.86
1883 1952 1.133915 ACACCACACCGTTTTCCTCAT 60.134 47.619 0.00 0.00 0.00 2.90
1923 1992 4.625742 CACCTAACTGATGAACAACCTACG 59.374 45.833 0.00 0.00 0.00 3.51
1929 1998 4.525487 ACTGATGAACAACCTACGTCCTAA 59.475 41.667 0.00 0.00 0.00 2.69
1956 2025 8.946085 ACATATAACCACATTTATAGAATGCCG 58.054 33.333 0.00 0.00 29.45 5.69
1959 2028 6.767524 AACCACATTTATAGAATGCCGAAA 57.232 33.333 0.00 0.00 0.00 3.46
2023 2092 3.806380 ACAATTTGCACATCAGCCAAAA 58.194 36.364 0.00 0.00 0.00 2.44
2032 2101 3.622163 CACATCAGCCAAAACAAAAGCAA 59.378 39.130 0.00 0.00 0.00 3.91
2036 2105 2.609002 CAGCCAAAACAAAAGCAAGTCC 59.391 45.455 0.00 0.00 0.00 3.85
2041 2110 5.277297 GCCAAAACAAAAGCAAGTCCATAAC 60.277 40.000 0.00 0.00 0.00 1.89
2042 2111 5.814705 CCAAAACAAAAGCAAGTCCATAACA 59.185 36.000 0.00 0.00 0.00 2.41
2047 2116 6.449698 ACAAAAGCAAGTCCATAACATGAAG 58.550 36.000 0.00 0.00 0.00 3.02
2048 2117 4.708726 AAGCAAGTCCATAACATGAAGC 57.291 40.909 0.00 0.00 0.00 3.86
2049 2118 3.689347 AGCAAGTCCATAACATGAAGCA 58.311 40.909 0.00 0.00 0.00 3.91
2050 2119 3.441572 AGCAAGTCCATAACATGAAGCAC 59.558 43.478 0.00 0.00 0.00 4.40
2051 2120 3.441572 GCAAGTCCATAACATGAAGCACT 59.558 43.478 0.00 0.00 0.00 4.40
2052 2121 4.635765 GCAAGTCCATAACATGAAGCACTA 59.364 41.667 0.00 0.00 0.00 2.74
2053 2122 5.447818 GCAAGTCCATAACATGAAGCACTAC 60.448 44.000 0.00 0.00 0.00 2.73
2054 2123 4.433615 AGTCCATAACATGAAGCACTACG 58.566 43.478 0.00 0.00 0.00 3.51
2055 2124 4.159693 AGTCCATAACATGAAGCACTACGA 59.840 41.667 0.00 0.00 0.00 3.43
2056 2125 4.868171 GTCCATAACATGAAGCACTACGAA 59.132 41.667 0.00 0.00 0.00 3.85
2057 2126 5.523916 GTCCATAACATGAAGCACTACGAAT 59.476 40.000 0.00 0.00 0.00 3.34
2058 2127 5.753438 TCCATAACATGAAGCACTACGAATC 59.247 40.000 0.00 0.00 0.00 2.52
2059 2128 5.523552 CCATAACATGAAGCACTACGAATCA 59.476 40.000 0.00 0.00 0.00 2.57
2060 2129 6.292542 CCATAACATGAAGCACTACGAATCAG 60.293 42.308 0.00 0.00 0.00 2.90
2061 2130 4.456280 ACATGAAGCACTACGAATCAGA 57.544 40.909 0.00 0.00 0.00 3.27
2062 2131 4.177026 ACATGAAGCACTACGAATCAGAC 58.823 43.478 0.00 0.00 0.00 3.51
2063 2132 4.081972 ACATGAAGCACTACGAATCAGACT 60.082 41.667 0.00 0.00 0.00 3.24
2064 2133 5.125578 ACATGAAGCACTACGAATCAGACTA 59.874 40.000 0.00 0.00 0.00 2.59
2065 2134 4.982999 TGAAGCACTACGAATCAGACTAC 58.017 43.478 0.00 0.00 0.00 2.73
2066 2135 4.700692 TGAAGCACTACGAATCAGACTACT 59.299 41.667 0.00 0.00 0.00 2.57
2067 2136 4.624336 AGCACTACGAATCAGACTACTG 57.376 45.455 0.00 0.00 44.66 2.74
2079 2148 5.584253 TCAGACTACTGATAAGTGCTTCC 57.416 43.478 0.00 0.00 46.55 3.46
2080 2149 5.265191 TCAGACTACTGATAAGTGCTTCCT 58.735 41.667 0.00 0.00 46.55 3.36
2081 2150 6.424032 TCAGACTACTGATAAGTGCTTCCTA 58.576 40.000 0.00 0.00 46.55 2.94
2082 2151 7.063593 TCAGACTACTGATAAGTGCTTCCTAT 58.936 38.462 0.00 0.00 46.55 2.57
2083 2152 7.229707 TCAGACTACTGATAAGTGCTTCCTATC 59.770 40.741 0.00 0.00 46.55 2.08
2084 2153 7.013750 CAGACTACTGATAAGTGCTTCCTATCA 59.986 40.741 0.00 0.00 46.03 2.15
2085 2154 7.230510 AGACTACTGATAAGTGCTTCCTATCAG 59.769 40.741 17.92 17.92 45.64 2.90
2086 2155 7.063593 ACTACTGATAAGTGCTTCCTATCAGA 58.936 38.462 22.46 12.43 43.97 3.27
2087 2156 6.155475 ACTGATAAGTGCTTCCTATCAGAC 57.845 41.667 22.46 0.00 43.97 3.51
2088 2157 5.896678 ACTGATAAGTGCTTCCTATCAGACT 59.103 40.000 22.46 8.76 43.97 3.24
2089 2158 6.382570 ACTGATAAGTGCTTCCTATCAGACTT 59.617 38.462 22.46 8.68 43.97 3.01
2090 2159 6.577103 TGATAAGTGCTTCCTATCAGACTTG 58.423 40.000 0.00 0.00 0.00 3.16
2091 2160 4.899352 AAGTGCTTCCTATCAGACTTGT 57.101 40.909 0.00 0.00 0.00 3.16
2092 2161 7.342026 TGATAAGTGCTTCCTATCAGACTTGTA 59.658 37.037 0.00 0.00 0.00 2.41
2093 2162 5.590530 AGTGCTTCCTATCAGACTTGTAG 57.409 43.478 0.00 0.00 0.00 2.74
2094 2163 4.404073 AGTGCTTCCTATCAGACTTGTAGG 59.596 45.833 4.24 4.24 37.03 3.18
2095 2164 4.160626 GTGCTTCCTATCAGACTTGTAGGT 59.839 45.833 8.91 0.00 37.01 3.08
2096 2165 4.160439 TGCTTCCTATCAGACTTGTAGGTG 59.840 45.833 8.91 5.94 37.01 4.00
2097 2166 4.402793 GCTTCCTATCAGACTTGTAGGTGA 59.597 45.833 8.91 0.00 37.01 4.02
2098 2167 5.680151 GCTTCCTATCAGACTTGTAGGTGAC 60.680 48.000 8.91 0.00 37.01 3.67
2099 2168 4.279145 TCCTATCAGACTTGTAGGTGACC 58.721 47.826 0.00 0.00 37.01 4.02
2100 2169 3.385111 CCTATCAGACTTGTAGGTGACCC 59.615 52.174 0.00 0.00 32.20 4.46
2101 2170 2.391926 TCAGACTTGTAGGTGACCCA 57.608 50.000 0.00 0.00 0.00 4.51
2102 2171 2.248248 TCAGACTTGTAGGTGACCCAG 58.752 52.381 0.00 0.00 0.00 4.45
2103 2172 1.276421 CAGACTTGTAGGTGACCCAGG 59.724 57.143 0.00 0.00 0.00 4.45
2104 2173 1.149288 AGACTTGTAGGTGACCCAGGA 59.851 52.381 0.00 0.00 0.00 3.86
2105 2174 2.188817 GACTTGTAGGTGACCCAGGAT 58.811 52.381 0.00 0.00 0.00 3.24
2106 2175 2.572104 GACTTGTAGGTGACCCAGGATT 59.428 50.000 0.00 0.00 0.00 3.01
2107 2176 3.773119 GACTTGTAGGTGACCCAGGATTA 59.227 47.826 0.00 0.00 0.00 1.75
2108 2177 4.172807 ACTTGTAGGTGACCCAGGATTAA 58.827 43.478 0.00 0.00 0.00 1.40
2109 2178 4.600111 ACTTGTAGGTGACCCAGGATTAAA 59.400 41.667 0.00 0.00 0.00 1.52
2110 2179 5.073965 ACTTGTAGGTGACCCAGGATTAAAA 59.926 40.000 0.00 0.00 0.00 1.52
2111 2180 4.913784 TGTAGGTGACCCAGGATTAAAAC 58.086 43.478 0.00 0.00 0.00 2.43
2112 2181 4.351407 TGTAGGTGACCCAGGATTAAAACA 59.649 41.667 0.00 0.00 0.00 2.83
2113 2182 4.463050 AGGTGACCCAGGATTAAAACAA 57.537 40.909 0.00 0.00 0.00 2.83
2114 2183 4.810345 AGGTGACCCAGGATTAAAACAAA 58.190 39.130 0.00 0.00 0.00 2.83
2115 2184 4.832823 AGGTGACCCAGGATTAAAACAAAG 59.167 41.667 0.00 0.00 0.00 2.77
2116 2185 4.830600 GGTGACCCAGGATTAAAACAAAGA 59.169 41.667 0.00 0.00 0.00 2.52
2117 2186 5.480422 GGTGACCCAGGATTAAAACAAAGAT 59.520 40.000 0.00 0.00 0.00 2.40
2118 2187 6.661805 GGTGACCCAGGATTAAAACAAAGATA 59.338 38.462 0.00 0.00 0.00 1.98
2119 2188 7.342026 GGTGACCCAGGATTAAAACAAAGATAT 59.658 37.037 0.00 0.00 0.00 1.63
2120 2189 8.749354 GTGACCCAGGATTAAAACAAAGATATT 58.251 33.333 0.00 0.00 0.00 1.28
2121 2190 8.966868 TGACCCAGGATTAAAACAAAGATATTC 58.033 33.333 0.00 0.00 0.00 1.75
2122 2191 7.996385 ACCCAGGATTAAAACAAAGATATTCG 58.004 34.615 0.00 0.00 0.00 3.34
2123 2192 7.614192 ACCCAGGATTAAAACAAAGATATTCGT 59.386 33.333 0.00 0.00 0.00 3.85
2124 2193 8.129211 CCCAGGATTAAAACAAAGATATTCGTC 58.871 37.037 0.00 0.00 0.00 4.20
2125 2194 8.129211 CCAGGATTAAAACAAAGATATTCGTCC 58.871 37.037 0.00 0.00 0.00 4.79
2126 2195 7.850982 CAGGATTAAAACAAAGATATTCGTCCG 59.149 37.037 0.00 0.00 0.00 4.79
2127 2196 7.767198 AGGATTAAAACAAAGATATTCGTCCGA 59.233 33.333 0.00 0.00 0.00 4.55
2128 2197 8.557029 GGATTAAAACAAAGATATTCGTCCGAT 58.443 33.333 0.00 0.00 0.00 4.18
2129 2198 9.582223 GATTAAAACAAAGATATTCGTCCGATC 57.418 33.333 0.00 0.00 0.00 3.69
2130 2199 8.712285 TTAAAACAAAGATATTCGTCCGATCT 57.288 30.769 0.00 0.00 0.00 2.75
2131 2200 9.806203 TTAAAACAAAGATATTCGTCCGATCTA 57.194 29.630 0.00 0.00 29.71 1.98
2132 2201 7.932120 AAACAAAGATATTCGTCCGATCTAG 57.068 36.000 0.00 0.00 29.71 2.43
2133 2202 6.636562 ACAAAGATATTCGTCCGATCTAGT 57.363 37.500 0.00 0.00 29.71 2.57
2134 2203 7.741027 ACAAAGATATTCGTCCGATCTAGTA 57.259 36.000 0.00 0.00 29.71 1.82
2135 2204 7.808672 ACAAAGATATTCGTCCGATCTAGTAG 58.191 38.462 0.00 0.00 29.71 2.57
2136 2205 6.988622 AAGATATTCGTCCGATCTAGTAGG 57.011 41.667 0.00 0.00 29.71 3.18
2137 2206 6.297080 AGATATTCGTCCGATCTAGTAGGA 57.703 41.667 0.00 0.00 0.00 2.94
2138 2207 6.709281 AGATATTCGTCCGATCTAGTAGGAA 58.291 40.000 0.00 0.00 33.04 3.36
2139 2208 7.166851 AGATATTCGTCCGATCTAGTAGGAAA 58.833 38.462 0.00 0.00 33.04 3.13
2140 2209 5.692613 ATTCGTCCGATCTAGTAGGAAAG 57.307 43.478 0.00 4.24 33.04 2.62
2141 2210 3.474600 TCGTCCGATCTAGTAGGAAAGG 58.525 50.000 0.00 0.00 33.04 3.11
2142 2211 2.553172 CGTCCGATCTAGTAGGAAAGGG 59.447 54.545 0.00 0.00 33.04 3.95
2143 2212 3.564264 GTCCGATCTAGTAGGAAAGGGT 58.436 50.000 0.00 0.00 33.04 4.34
2144 2213 3.569277 GTCCGATCTAGTAGGAAAGGGTC 59.431 52.174 0.00 0.00 33.04 4.46
2145 2214 3.203710 TCCGATCTAGTAGGAAAGGGTCA 59.796 47.826 0.00 0.00 0.00 4.02
2146 2215 3.570550 CCGATCTAGTAGGAAAGGGTCAG 59.429 52.174 0.00 0.00 0.00 3.51
2147 2216 3.570550 CGATCTAGTAGGAAAGGGTCAGG 59.429 52.174 0.00 0.00 0.00 3.86
2148 2217 2.748388 TCTAGTAGGAAAGGGTCAGGC 58.252 52.381 0.00 0.00 0.00 4.85
2149 2218 1.409427 CTAGTAGGAAAGGGTCAGGCG 59.591 57.143 0.00 0.00 0.00 5.52
2150 2219 0.544595 AGTAGGAAAGGGTCAGGCGT 60.545 55.000 0.00 0.00 0.00 5.68
2151 2220 0.108281 GTAGGAAAGGGTCAGGCGTC 60.108 60.000 0.00 0.00 0.00 5.19
2152 2221 1.601419 TAGGAAAGGGTCAGGCGTCG 61.601 60.000 0.00 0.00 0.00 5.12
2153 2222 2.342648 GAAAGGGTCAGGCGTCGT 59.657 61.111 0.00 0.00 0.00 4.34
2154 2223 2.027625 GAAAGGGTCAGGCGTCGTG 61.028 63.158 0.00 0.00 0.00 4.35
2155 2224 2.710724 GAAAGGGTCAGGCGTCGTGT 62.711 60.000 0.00 0.00 0.00 4.49
2156 2225 1.466025 AAAGGGTCAGGCGTCGTGTA 61.466 55.000 0.00 0.00 0.00 2.90
2157 2226 1.874345 AAGGGTCAGGCGTCGTGTAG 61.874 60.000 0.00 0.00 0.00 2.74
2158 2227 2.633509 GGGTCAGGCGTCGTGTAGT 61.634 63.158 0.00 0.00 0.00 2.73
2159 2228 1.288127 GGTCAGGCGTCGTGTAGTT 59.712 57.895 0.00 0.00 0.00 2.24
2160 2229 0.319297 GGTCAGGCGTCGTGTAGTTT 60.319 55.000 0.00 0.00 0.00 2.66
2161 2230 1.058404 GTCAGGCGTCGTGTAGTTTC 58.942 55.000 0.00 0.00 0.00 2.78
2162 2231 0.956633 TCAGGCGTCGTGTAGTTTCT 59.043 50.000 0.00 0.00 0.00 2.52
2163 2232 1.338973 TCAGGCGTCGTGTAGTTTCTT 59.661 47.619 0.00 0.00 0.00 2.52
2164 2233 2.132762 CAGGCGTCGTGTAGTTTCTTT 58.867 47.619 0.00 0.00 0.00 2.52
2165 2234 2.155155 CAGGCGTCGTGTAGTTTCTTTC 59.845 50.000 0.00 0.00 0.00 2.62
2166 2235 1.458445 GGCGTCGTGTAGTTTCTTTCC 59.542 52.381 0.00 0.00 0.00 3.13
2167 2236 2.401351 GCGTCGTGTAGTTTCTTTCCT 58.599 47.619 0.00 0.00 0.00 3.36
2168 2237 2.155155 GCGTCGTGTAGTTTCTTTCCTG 59.845 50.000 0.00 0.00 0.00 3.86
2169 2238 3.378339 CGTCGTGTAGTTTCTTTCCTGT 58.622 45.455 0.00 0.00 0.00 4.00
2170 2239 4.539870 CGTCGTGTAGTTTCTTTCCTGTA 58.460 43.478 0.00 0.00 0.00 2.74
2171 2240 4.615961 CGTCGTGTAGTTTCTTTCCTGTAG 59.384 45.833 0.00 0.00 0.00 2.74
2172 2241 5.527033 GTCGTGTAGTTTCTTTCCTGTAGT 58.473 41.667 0.00 0.00 0.00 2.73
2173 2242 6.566564 CGTCGTGTAGTTTCTTTCCTGTAGTA 60.567 42.308 0.00 0.00 0.00 1.82
2174 2243 7.141363 GTCGTGTAGTTTCTTTCCTGTAGTAA 58.859 38.462 0.00 0.00 0.00 2.24
2175 2244 7.811713 GTCGTGTAGTTTCTTTCCTGTAGTAAT 59.188 37.037 0.00 0.00 0.00 1.89
2176 2245 8.362639 TCGTGTAGTTTCTTTCCTGTAGTAATT 58.637 33.333 0.00 0.00 0.00 1.40
2177 2246 9.630098 CGTGTAGTTTCTTTCCTGTAGTAATTA 57.370 33.333 0.00 0.00 0.00 1.40
2179 2248 9.630098 TGTAGTTTCTTTCCTGTAGTAATTACG 57.370 33.333 9.91 0.00 34.87 3.18
2180 2249 9.631452 GTAGTTTCTTTCCTGTAGTAATTACGT 57.369 33.333 9.91 0.00 34.87 3.57
2181 2250 8.530269 AGTTTCTTTCCTGTAGTAATTACGTG 57.470 34.615 9.91 2.39 34.87 4.49
2182 2251 6.956299 TTCTTTCCTGTAGTAATTACGTGC 57.044 37.500 9.91 5.30 34.87 5.34
2183 2252 6.276832 TCTTTCCTGTAGTAATTACGTGCT 57.723 37.500 9.91 0.00 34.87 4.40
2184 2253 6.694447 TCTTTCCTGTAGTAATTACGTGCTT 58.306 36.000 9.91 0.00 34.87 3.91
2185 2254 7.156673 TCTTTCCTGTAGTAATTACGTGCTTT 58.843 34.615 9.91 0.00 34.87 3.51
2186 2255 6.956299 TTCCTGTAGTAATTACGTGCTTTC 57.044 37.500 9.91 0.00 34.87 2.62
2187 2256 5.097529 TCCTGTAGTAATTACGTGCTTTCG 58.902 41.667 9.91 0.00 34.87 3.46
2188 2257 4.266976 CCTGTAGTAATTACGTGCTTTCGG 59.733 45.833 9.91 1.34 34.87 4.30
2189 2258 4.808558 TGTAGTAATTACGTGCTTTCGGT 58.191 39.130 9.91 0.00 34.87 4.69
2190 2259 5.948588 TGTAGTAATTACGTGCTTTCGGTA 58.051 37.500 9.91 0.00 34.87 4.02
2191 2260 6.385843 TGTAGTAATTACGTGCTTTCGGTAA 58.614 36.000 9.91 0.00 34.87 2.85
2192 2261 5.768333 AGTAATTACGTGCTTTCGGTAAC 57.232 39.130 9.91 0.00 34.94 2.50
2193 2262 5.473039 AGTAATTACGTGCTTTCGGTAACT 58.527 37.500 9.91 0.00 34.94 2.24
2194 2263 6.620678 AGTAATTACGTGCTTTCGGTAACTA 58.379 36.000 9.91 0.00 34.94 2.24
2195 2264 7.090173 AGTAATTACGTGCTTTCGGTAACTAA 58.910 34.615 9.91 0.00 34.94 2.24
2196 2265 6.973229 AATTACGTGCTTTCGGTAACTAAT 57.027 33.333 0.00 0.00 34.94 1.73
2197 2266 6.579491 ATTACGTGCTTTCGGTAACTAATC 57.421 37.500 0.00 0.00 34.94 1.75
2198 2267 3.256558 ACGTGCTTTCGGTAACTAATCC 58.743 45.455 0.00 0.00 34.94 3.01
2199 2268 3.056322 ACGTGCTTTCGGTAACTAATCCT 60.056 43.478 0.00 0.00 34.94 3.24
2200 2269 3.306166 CGTGCTTTCGGTAACTAATCCTG 59.694 47.826 0.00 0.00 0.00 3.86
2201 2270 4.251268 GTGCTTTCGGTAACTAATCCTGT 58.749 43.478 0.00 0.00 0.00 4.00
2202 2271 5.413499 GTGCTTTCGGTAACTAATCCTGTA 58.587 41.667 0.00 0.00 0.00 2.74
2203 2272 5.519206 GTGCTTTCGGTAACTAATCCTGTAG 59.481 44.000 0.00 0.00 0.00 2.74
2204 2273 5.048507 GCTTTCGGTAACTAATCCTGTAGG 58.951 45.833 0.00 0.00 0.00 3.18
2205 2274 5.598769 CTTTCGGTAACTAATCCTGTAGGG 58.401 45.833 0.00 0.00 35.41 3.53
2206 2275 4.255510 TCGGTAACTAATCCTGTAGGGT 57.744 45.455 0.00 0.00 36.25 4.34
2207 2276 4.210331 TCGGTAACTAATCCTGTAGGGTC 58.790 47.826 0.00 0.00 36.25 4.46
2208 2277 4.079558 TCGGTAACTAATCCTGTAGGGTCT 60.080 45.833 0.00 0.00 36.25 3.85
2209 2278 4.648307 CGGTAACTAATCCTGTAGGGTCTT 59.352 45.833 0.00 0.00 36.25 3.01
2210 2279 5.221204 CGGTAACTAATCCTGTAGGGTCTTC 60.221 48.000 0.00 0.00 36.25 2.87
2211 2280 5.898397 GGTAACTAATCCTGTAGGGTCTTCT 59.102 44.000 0.00 0.00 36.25 2.85
2212 2281 6.040729 GGTAACTAATCCTGTAGGGTCTTCTC 59.959 46.154 0.00 0.00 36.25 2.87
2213 2282 5.475398 ACTAATCCTGTAGGGTCTTCTCT 57.525 43.478 0.00 0.00 36.25 3.10
2214 2283 5.451354 ACTAATCCTGTAGGGTCTTCTCTC 58.549 45.833 0.00 0.00 36.25 3.20
2215 2284 2.830651 TCCTGTAGGGTCTTCTCTCC 57.169 55.000 0.00 0.00 36.25 3.71
2216 2285 1.064611 TCCTGTAGGGTCTTCTCTCCG 60.065 57.143 0.00 0.00 36.25 4.63
2217 2286 1.394618 CTGTAGGGTCTTCTCTCCGG 58.605 60.000 0.00 0.00 0.00 5.14
2218 2287 0.683504 TGTAGGGTCTTCTCTCCGGC 60.684 60.000 0.00 0.00 0.00 6.13
2219 2288 1.076192 TAGGGTCTTCTCTCCGGCC 60.076 63.158 0.00 0.00 0.00 6.13
2220 2289 2.905935 TAGGGTCTTCTCTCCGGCCG 62.906 65.000 21.04 21.04 0.00 6.13
2221 2290 4.516195 GGTCTTCTCTCCGGCCGC 62.516 72.222 22.85 1.61 0.00 6.53
2222 2291 3.453679 GTCTTCTCTCCGGCCGCT 61.454 66.667 22.85 0.00 0.00 5.52
2223 2292 2.119655 GTCTTCTCTCCGGCCGCTA 61.120 63.158 22.85 9.21 0.00 4.26
2224 2293 1.379443 TCTTCTCTCCGGCCGCTAA 60.379 57.895 22.85 6.25 0.00 3.09
2225 2294 1.227002 CTTCTCTCCGGCCGCTAAC 60.227 63.158 22.85 0.00 0.00 2.34
2226 2295 2.630592 CTTCTCTCCGGCCGCTAACC 62.631 65.000 22.85 0.00 0.00 2.85
2227 2296 3.148279 CTCTCCGGCCGCTAACCT 61.148 66.667 22.85 0.00 0.00 3.50
2228 2297 3.140225 CTCTCCGGCCGCTAACCTC 62.140 68.421 22.85 0.00 0.00 3.85
2229 2298 3.148279 CTCCGGCCGCTAACCTCT 61.148 66.667 22.85 0.00 0.00 3.69
2230 2299 3.140225 CTCCGGCCGCTAACCTCTC 62.140 68.421 22.85 0.00 0.00 3.20
2231 2300 3.148279 CCGGCCGCTAACCTCTCT 61.148 66.667 22.85 0.00 0.00 3.10
2232 2301 1.826921 CCGGCCGCTAACCTCTCTA 60.827 63.158 22.85 0.00 0.00 2.43
2233 2302 1.359475 CGGCCGCTAACCTCTCTAC 59.641 63.158 14.67 0.00 0.00 2.59
2234 2303 1.359475 GGCCGCTAACCTCTCTACG 59.641 63.158 0.00 0.00 0.00 3.51
2235 2304 1.299240 GCCGCTAACCTCTCTACGC 60.299 63.158 0.00 0.00 0.00 4.42
2236 2305 1.726533 GCCGCTAACCTCTCTACGCT 61.727 60.000 0.00 0.00 0.00 5.07
2237 2306 0.308376 CCGCTAACCTCTCTACGCTC 59.692 60.000 0.00 0.00 0.00 5.03
2238 2307 1.301423 CGCTAACCTCTCTACGCTCT 58.699 55.000 0.00 0.00 0.00 4.09
2239 2308 2.481854 CGCTAACCTCTCTACGCTCTA 58.518 52.381 0.00 0.00 0.00 2.43
2240 2309 2.221517 CGCTAACCTCTCTACGCTCTAC 59.778 54.545 0.00 0.00 0.00 2.59
2241 2310 3.469739 GCTAACCTCTCTACGCTCTACT 58.530 50.000 0.00 0.00 0.00 2.57
2242 2311 4.630111 GCTAACCTCTCTACGCTCTACTA 58.370 47.826 0.00 0.00 0.00 1.82
2243 2312 5.055812 GCTAACCTCTCTACGCTCTACTAA 58.944 45.833 0.00 0.00 0.00 2.24
2244 2313 5.702209 GCTAACCTCTCTACGCTCTACTAAT 59.298 44.000 0.00 0.00 0.00 1.73
2245 2314 6.205270 GCTAACCTCTCTACGCTCTACTAATT 59.795 42.308 0.00 0.00 0.00 1.40
2246 2315 7.387397 GCTAACCTCTCTACGCTCTACTAATTA 59.613 40.741 0.00 0.00 0.00 1.40
2247 2316 7.495135 AACCTCTCTACGCTCTACTAATTAC 57.505 40.000 0.00 0.00 0.00 1.89
2248 2317 5.695816 ACCTCTCTACGCTCTACTAATTACG 59.304 44.000 0.00 0.00 0.00 3.18
2249 2318 5.389725 CCTCTCTACGCTCTACTAATTACGC 60.390 48.000 0.00 0.00 0.00 4.42
2250 2319 4.149571 TCTCTACGCTCTACTAATTACGCG 59.850 45.833 3.53 3.53 45.32 6.01
2251 2320 1.751552 ACGCTCTACTAATTACGCGC 58.248 50.000 5.73 0.00 43.85 6.86
2252 2321 1.332997 ACGCTCTACTAATTACGCGCT 59.667 47.619 5.73 0.00 43.85 5.92
2253 2322 1.709203 CGCTCTACTAATTACGCGCTG 59.291 52.381 5.73 1.02 34.05 5.18
2254 2323 2.601504 CGCTCTACTAATTACGCGCTGA 60.602 50.000 5.73 0.00 34.05 4.26
2255 2324 2.974536 GCTCTACTAATTACGCGCTGAG 59.025 50.000 5.73 0.00 0.00 3.35
2256 2325 3.548415 GCTCTACTAATTACGCGCTGAGT 60.548 47.826 5.73 5.46 0.00 3.41
2257 2326 4.319333 GCTCTACTAATTACGCGCTGAGTA 60.319 45.833 5.73 6.41 0.00 2.59
2258 2327 5.088141 TCTACTAATTACGCGCTGAGTAC 57.912 43.478 5.73 0.00 0.00 2.73
2259 2328 2.713011 ACTAATTACGCGCTGAGTACG 58.287 47.619 5.73 0.00 0.00 3.67
2260 2329 2.041966 CTAATTACGCGCTGAGTACGG 58.958 52.381 5.73 0.00 0.00 4.02
2261 2330 0.171903 AATTACGCGCTGAGTACGGT 59.828 50.000 5.73 0.00 0.00 4.83
2262 2331 1.016627 ATTACGCGCTGAGTACGGTA 58.983 50.000 5.73 0.00 0.00 4.02
2263 2332 0.801872 TTACGCGCTGAGTACGGTAA 59.198 50.000 5.73 0.62 0.00 2.85
2264 2333 1.016627 TACGCGCTGAGTACGGTAAT 58.983 50.000 5.73 0.00 0.00 1.89
2265 2334 0.524816 ACGCGCTGAGTACGGTAATG 60.525 55.000 5.73 0.00 0.00 1.90
2266 2335 1.206745 CGCGCTGAGTACGGTAATGG 61.207 60.000 5.56 0.00 0.00 3.16
2267 2336 0.101759 GCGCTGAGTACGGTAATGGA 59.898 55.000 0.00 0.00 0.00 3.41
2268 2337 1.269621 GCGCTGAGTACGGTAATGGAT 60.270 52.381 0.00 0.00 0.00 3.41
2269 2338 2.662700 CGCTGAGTACGGTAATGGATC 58.337 52.381 0.00 0.00 0.00 3.36
2270 2339 2.607282 CGCTGAGTACGGTAATGGATCC 60.607 54.545 4.20 4.20 0.00 3.36
2271 2340 2.628657 GCTGAGTACGGTAATGGATCCT 59.371 50.000 14.23 0.00 0.00 3.24
2272 2341 3.069729 GCTGAGTACGGTAATGGATCCTT 59.930 47.826 14.23 3.29 0.00 3.36
2273 2342 4.796618 GCTGAGTACGGTAATGGATCCTTC 60.797 50.000 14.23 0.61 0.00 3.46
2274 2343 3.640029 TGAGTACGGTAATGGATCCTTCC 59.360 47.826 14.23 8.87 42.94 3.46
2275 2344 3.896272 GAGTACGGTAATGGATCCTTCCT 59.104 47.826 14.23 0.00 43.07 3.36
2276 2345 3.896272 AGTACGGTAATGGATCCTTCCTC 59.104 47.826 14.23 0.00 43.07 3.71
2277 2346 1.687123 ACGGTAATGGATCCTTCCTCG 59.313 52.381 14.23 13.49 43.07 4.63
2278 2347 1.961394 CGGTAATGGATCCTTCCTCGA 59.039 52.381 14.23 0.00 43.07 4.04
2279 2348 2.563179 CGGTAATGGATCCTTCCTCGAT 59.437 50.000 14.23 0.00 43.07 3.59
2280 2349 3.367498 CGGTAATGGATCCTTCCTCGATC 60.367 52.174 14.23 0.00 43.07 3.69
2281 2350 3.578716 GGTAATGGATCCTTCCTCGATCA 59.421 47.826 14.23 0.00 43.07 2.92
2282 2351 4.040461 GGTAATGGATCCTTCCTCGATCAA 59.960 45.833 14.23 0.00 43.07 2.57
2283 2352 4.348863 AATGGATCCTTCCTCGATCAAG 57.651 45.455 14.23 0.00 43.07 3.02
2284 2353 2.042464 TGGATCCTTCCTCGATCAAGG 58.958 52.381 14.23 13.97 43.07 3.61
2291 2360 2.969628 TCCTCGATCAAGGAAGAAGC 57.030 50.000 0.00 0.00 42.56 3.86
2292 2361 2.179427 TCCTCGATCAAGGAAGAAGCA 58.821 47.619 0.00 0.00 42.56 3.91
2293 2362 2.768527 TCCTCGATCAAGGAAGAAGCAT 59.231 45.455 0.00 0.00 42.56 3.79
2294 2363 2.871022 CCTCGATCAAGGAAGAAGCATG 59.129 50.000 0.00 0.00 38.87 4.06
2295 2364 3.431346 CCTCGATCAAGGAAGAAGCATGA 60.431 47.826 0.00 0.00 38.87 3.07
2296 2365 4.378774 CTCGATCAAGGAAGAAGCATGAT 58.621 43.478 0.00 0.00 33.64 2.45
2297 2366 4.124970 TCGATCAAGGAAGAAGCATGATG 58.875 43.478 0.00 0.00 31.24 3.07
2298 2367 3.303857 CGATCAAGGAAGAAGCATGATGC 60.304 47.826 9.89 9.89 45.46 3.91
2312 2381 3.976169 CATGATGCATGCATGACATTGA 58.024 40.909 36.73 19.88 44.49 2.57
2313 2382 3.708563 TGATGCATGCATGACATTGAG 57.291 42.857 36.73 1.01 36.64 3.02
2314 2383 3.020984 TGATGCATGCATGACATTGAGT 58.979 40.909 36.73 10.61 36.64 3.41
2315 2384 4.200874 TGATGCATGCATGACATTGAGTA 58.799 39.130 36.73 13.48 36.64 2.59
2316 2385 4.641094 TGATGCATGCATGACATTGAGTAA 59.359 37.500 36.73 2.01 36.64 2.24
2317 2386 5.300792 TGATGCATGCATGACATTGAGTAAT 59.699 36.000 36.73 9.30 36.64 1.89
2318 2387 6.487331 TGATGCATGCATGACATTGAGTAATA 59.513 34.615 36.73 0.82 36.64 0.98
2319 2388 6.887626 TGCATGCATGACATTGAGTAATAT 57.112 33.333 30.64 0.00 36.64 1.28
2320 2389 7.279750 TGCATGCATGACATTGAGTAATATT 57.720 32.000 30.64 0.00 36.64 1.28
2321 2390 7.718525 TGCATGCATGACATTGAGTAATATTT 58.281 30.769 30.64 0.00 36.64 1.40
2322 2391 7.650104 TGCATGCATGACATTGAGTAATATTTG 59.350 33.333 30.64 0.00 36.64 2.32
2323 2392 7.358931 GCATGCATGACATTGAGTAATATTTGC 60.359 37.037 30.64 5.29 36.64 3.68
2324 2393 7.337480 TGCATGACATTGAGTAATATTTGCT 57.663 32.000 0.00 0.00 0.00 3.91
2325 2394 7.774134 TGCATGACATTGAGTAATATTTGCTT 58.226 30.769 0.00 0.00 0.00 3.91
2326 2395 7.916977 TGCATGACATTGAGTAATATTTGCTTC 59.083 33.333 0.00 0.00 0.00 3.86
2327 2396 7.380602 GCATGACATTGAGTAATATTTGCTTCC 59.619 37.037 0.00 0.00 0.00 3.46
2328 2397 7.936496 TGACATTGAGTAATATTTGCTTCCA 57.064 32.000 0.00 0.00 0.00 3.53
2329 2398 8.523915 TGACATTGAGTAATATTTGCTTCCAT 57.476 30.769 0.00 0.00 0.00 3.41
2330 2399 9.625747 TGACATTGAGTAATATTTGCTTCCATA 57.374 29.630 0.00 0.00 0.00 2.74
2332 2401 9.851686 ACATTGAGTAATATTTGCTTCCATAGA 57.148 29.630 0.00 0.00 0.00 1.98
2336 2405 9.905713 TGAGTAATATTTGCTTCCATAGAAACT 57.094 29.630 0.00 0.00 0.00 2.66
2343 2412 8.829373 ATTTGCTTCCATAGAAACTAATTCCT 57.171 30.769 0.00 0.00 38.94 3.36
2344 2413 9.920946 ATTTGCTTCCATAGAAACTAATTCCTA 57.079 29.630 0.00 0.00 38.94 2.94
2345 2414 8.964476 TTGCTTCCATAGAAACTAATTCCTAG 57.036 34.615 0.00 0.00 38.94 3.02
2346 2415 8.090788 TGCTTCCATAGAAACTAATTCCTAGT 57.909 34.615 0.00 0.00 43.06 2.57
2347 2416 9.209048 TGCTTCCATAGAAACTAATTCCTAGTA 57.791 33.333 0.00 0.00 40.14 1.82
2364 2433 8.918961 TTCCTAGTAACAAATTTTGTGTGTTG 57.081 30.769 15.17 6.68 44.59 3.33
2365 2434 7.484975 TCCTAGTAACAAATTTTGTGTGTTGG 58.515 34.615 15.17 13.98 44.59 3.77
2366 2435 7.339721 TCCTAGTAACAAATTTTGTGTGTTGGA 59.660 33.333 15.17 15.67 44.59 3.53
2367 2436 7.976734 CCTAGTAACAAATTTTGTGTGTTGGAA 59.023 33.333 15.17 0.00 44.59 3.53
2368 2437 7.826260 AGTAACAAATTTTGTGTGTTGGAAG 57.174 32.000 15.17 0.00 44.59 3.46
2369 2438 5.544136 AACAAATTTTGTGTGTTGGAAGC 57.456 34.783 15.17 0.00 44.59 3.86
2370 2439 4.573900 ACAAATTTTGTGTGTTGGAAGCA 58.426 34.783 13.80 0.00 43.48 3.91
2371 2440 5.184711 ACAAATTTTGTGTGTTGGAAGCAT 58.815 33.333 13.80 0.00 43.48 3.79
2372 2441 5.647225 ACAAATTTTGTGTGTTGGAAGCATT 59.353 32.000 13.80 0.00 43.48 3.56
2373 2442 5.738118 AATTTTGTGTGTTGGAAGCATTG 57.262 34.783 0.00 0.00 0.00 2.82
2374 2443 2.886862 TTGTGTGTTGGAAGCATTGG 57.113 45.000 0.00 0.00 0.00 3.16
2375 2444 0.388659 TGTGTGTTGGAAGCATTGGC 59.611 50.000 0.00 0.00 41.61 4.52
2376 2445 0.388659 GTGTGTTGGAAGCATTGGCA 59.611 50.000 0.00 0.00 44.61 4.92
2377 2446 1.001181 GTGTGTTGGAAGCATTGGCAT 59.999 47.619 0.00 0.00 44.61 4.40
2378 2447 1.693062 TGTGTTGGAAGCATTGGCATT 59.307 42.857 0.00 0.00 44.61 3.56
2379 2448 2.070783 GTGTTGGAAGCATTGGCATTG 58.929 47.619 5.04 5.04 44.61 2.82
2380 2449 1.693062 TGTTGGAAGCATTGGCATTGT 59.307 42.857 10.72 0.00 44.61 2.71
2381 2450 2.104451 TGTTGGAAGCATTGGCATTGTT 59.896 40.909 10.72 2.23 44.61 2.83
2382 2451 2.738314 GTTGGAAGCATTGGCATTGTTC 59.262 45.455 10.72 11.65 44.61 3.18
2383 2452 1.275856 TGGAAGCATTGGCATTGTTCC 59.724 47.619 22.64 22.64 44.61 3.62
2384 2453 1.275856 GGAAGCATTGGCATTGTTCCA 59.724 47.619 23.54 0.00 44.61 3.53
2385 2454 2.093341 GGAAGCATTGGCATTGTTCCAT 60.093 45.455 23.54 4.58 44.61 3.41
2386 2455 2.973694 AGCATTGGCATTGTTCCATC 57.026 45.000 10.72 0.00 44.61 3.51
2387 2456 1.135527 AGCATTGGCATTGTTCCATCG 59.864 47.619 10.72 0.00 44.61 3.84
2388 2457 1.134753 GCATTGGCATTGTTCCATCGA 59.865 47.619 10.72 0.00 40.72 3.59
2389 2458 2.801063 CATTGGCATTGTTCCATCGAC 58.199 47.619 1.27 0.00 32.92 4.20
2390 2459 2.198827 TTGGCATTGTTCCATCGACT 57.801 45.000 0.00 0.00 32.92 4.18
2391 2460 3.342377 TTGGCATTGTTCCATCGACTA 57.658 42.857 0.00 0.00 32.92 2.59
2392 2461 2.905075 TGGCATTGTTCCATCGACTAG 58.095 47.619 0.00 0.00 0.00 2.57
2393 2462 2.499693 TGGCATTGTTCCATCGACTAGA 59.500 45.455 0.00 0.00 0.00 2.43
2394 2463 3.134623 TGGCATTGTTCCATCGACTAGAT 59.865 43.478 0.00 0.00 41.01 1.98
2395 2464 4.343814 TGGCATTGTTCCATCGACTAGATA 59.656 41.667 0.00 0.00 37.52 1.98
2396 2465 5.163353 TGGCATTGTTCCATCGACTAGATAA 60.163 40.000 0.00 0.00 37.52 1.75
2397 2466 5.934625 GGCATTGTTCCATCGACTAGATAAT 59.065 40.000 0.00 0.00 37.52 1.28
2398 2467 6.428159 GGCATTGTTCCATCGACTAGATAATT 59.572 38.462 0.00 0.00 37.52 1.40
2399 2468 7.360438 GGCATTGTTCCATCGACTAGATAATTC 60.360 40.741 0.00 0.00 37.52 2.17
2400 2469 7.171508 GCATTGTTCCATCGACTAGATAATTCA 59.828 37.037 0.00 0.00 37.52 2.57
2401 2470 9.212641 CATTGTTCCATCGACTAGATAATTCAT 57.787 33.333 0.00 0.00 37.52 2.57
2402 2471 8.818141 TTGTTCCATCGACTAGATAATTCATC 57.182 34.615 0.00 0.00 37.52 2.92
2403 2472 7.951591 TGTTCCATCGACTAGATAATTCATCA 58.048 34.615 0.00 0.00 37.52 3.07
2404 2473 8.588472 TGTTCCATCGACTAGATAATTCATCAT 58.412 33.333 0.00 0.00 37.52 2.45
2405 2474 9.081997 GTTCCATCGACTAGATAATTCATCATC 57.918 37.037 0.00 0.00 37.52 2.92
2406 2475 7.776107 TCCATCGACTAGATAATTCATCATCC 58.224 38.462 0.00 0.00 37.52 3.51
2407 2476 7.397192 TCCATCGACTAGATAATTCATCATCCA 59.603 37.037 0.00 0.00 37.52 3.41
2408 2477 8.037166 CCATCGACTAGATAATTCATCATCCAA 58.963 37.037 0.00 0.00 37.52 3.53
2409 2478 8.867935 CATCGACTAGATAATTCATCATCCAAC 58.132 37.037 0.00 0.00 37.52 3.77
2410 2479 8.183104 TCGACTAGATAATTCATCATCCAACT 57.817 34.615 0.00 0.00 35.96 3.16
2411 2480 9.297037 TCGACTAGATAATTCATCATCCAACTA 57.703 33.333 0.00 0.00 35.96 2.24
2412 2481 9.914131 CGACTAGATAATTCATCATCCAACTAA 57.086 33.333 0.00 0.00 35.96 2.24
2417 2486 9.911788 AGATAATTCATCATCCAACTAAACAGT 57.088 29.630 0.00 0.00 35.96 3.55
2418 2487 9.941664 GATAATTCATCATCCAACTAAACAGTG 57.058 33.333 0.00 0.00 33.46 3.66
2419 2488 9.685276 ATAATTCATCATCCAACTAAACAGTGA 57.315 29.630 0.00 0.00 0.00 3.41
2420 2489 8.585471 AATTCATCATCCAACTAAACAGTGAT 57.415 30.769 0.00 0.00 0.00 3.06
2421 2490 8.585471 ATTCATCATCCAACTAAACAGTGATT 57.415 30.769 0.00 0.00 0.00 2.57
2422 2491 8.408043 TTCATCATCCAACTAAACAGTGATTT 57.592 30.769 0.00 0.00 0.00 2.17
2423 2492 7.819644 TCATCATCCAACTAAACAGTGATTTG 58.180 34.615 0.00 0.00 0.00 2.32
2424 2493 7.448161 TCATCATCCAACTAAACAGTGATTTGT 59.552 33.333 0.00 0.00 0.00 2.83
2425 2494 7.581213 TCATCCAACTAAACAGTGATTTGTT 57.419 32.000 7.04 7.04 42.82 2.83
2427 2496 8.134895 TCATCCAACTAAACAGTGATTTGTTTC 58.865 33.333 9.57 0.00 45.49 2.78
2428 2497 6.801575 TCCAACTAAACAGTGATTTGTTTCC 58.198 36.000 9.57 0.00 45.49 3.13
2429 2498 6.605594 TCCAACTAAACAGTGATTTGTTTCCT 59.394 34.615 9.57 0.00 45.49 3.36
2430 2499 7.123547 TCCAACTAAACAGTGATTTGTTTCCTT 59.876 33.333 9.57 0.00 45.49 3.36
2431 2500 7.435192 CCAACTAAACAGTGATTTGTTTCCTTC 59.565 37.037 9.57 0.00 45.49 3.46
2432 2501 7.639113 ACTAAACAGTGATTTGTTTCCTTCA 57.361 32.000 7.33 0.00 45.49 3.02
2433 2502 8.062065 ACTAAACAGTGATTTGTTTCCTTCAA 57.938 30.769 7.33 0.00 45.49 2.69
2434 2503 8.527810 ACTAAACAGTGATTTGTTTCCTTCAAA 58.472 29.630 7.33 0.00 45.49 2.69
2435 2504 7.595311 AAACAGTGATTTGTTTCCTTCAAAC 57.405 32.000 0.00 0.00 45.49 2.93
2466 2535 7.751768 AAAAACATTTTCCCACTTGTTTCAA 57.248 28.000 0.00 0.00 40.39 2.69
2467 2536 7.751768 AAAACATTTTCCCACTTGTTTCAAA 57.248 28.000 0.00 0.00 40.39 2.69
2468 2537 7.751768 AAACATTTTCCCACTTGTTTCAAAA 57.248 28.000 0.00 0.00 37.67 2.44
2469 2538 6.983474 ACATTTTCCCACTTGTTTCAAAAG 57.017 33.333 0.00 0.00 0.00 2.27
2470 2539 6.472016 ACATTTTCCCACTTGTTTCAAAAGT 58.528 32.000 0.00 0.00 38.40 2.66
2471 2540 7.616313 ACATTTTCCCACTTGTTTCAAAAGTA 58.384 30.769 0.00 0.00 35.70 2.24
2472 2541 8.264347 ACATTTTCCCACTTGTTTCAAAAGTAT 58.736 29.630 0.00 0.00 35.70 2.12
2473 2542 9.757227 CATTTTCCCACTTGTTTCAAAAGTATA 57.243 29.630 0.00 0.00 35.70 1.47
2474 2543 9.758651 ATTTTCCCACTTGTTTCAAAAGTATAC 57.241 29.630 0.00 0.00 35.70 1.47
2475 2544 7.883391 TTCCCACTTGTTTCAAAAGTATACA 57.117 32.000 5.50 0.00 35.70 2.29
2476 2545 7.266922 TCCCACTTGTTTCAAAAGTATACAC 57.733 36.000 5.50 0.00 35.70 2.90
2477 2546 6.263617 TCCCACTTGTTTCAAAAGTATACACC 59.736 38.462 5.50 0.00 35.70 4.16
2478 2547 6.264518 CCCACTTGTTTCAAAAGTATACACCT 59.735 38.462 5.50 0.00 35.70 4.00
2479 2548 7.138736 CCACTTGTTTCAAAAGTATACACCTG 58.861 38.462 5.50 0.00 35.70 4.00
2480 2549 7.138736 CACTTGTTTCAAAAGTATACACCTGG 58.861 38.462 5.50 0.00 35.70 4.45
2481 2550 6.831868 ACTTGTTTCAAAAGTATACACCTGGT 59.168 34.615 5.50 0.00 36.11 4.00
2482 2551 6.627395 TGTTTCAAAAGTATACACCTGGTG 57.373 37.500 24.80 24.80 39.75 4.17
2483 2552 5.009210 TGTTTCAAAAGTATACACCTGGTGC 59.991 40.000 26.20 10.25 36.98 5.01
2484 2553 4.634012 TCAAAAGTATACACCTGGTGCT 57.366 40.909 26.20 16.12 36.98 4.40
2485 2554 4.980573 TCAAAAGTATACACCTGGTGCTT 58.019 39.130 26.20 17.44 36.98 3.91
2486 2555 5.001232 TCAAAAGTATACACCTGGTGCTTC 58.999 41.667 26.20 13.91 36.98 3.86
2487 2556 3.629142 AAGTATACACCTGGTGCTTCC 57.371 47.619 26.20 12.18 36.98 3.46
2488 2557 1.480954 AGTATACACCTGGTGCTTCCG 59.519 52.381 26.20 2.17 36.98 4.30
2489 2558 1.206371 GTATACACCTGGTGCTTCCGT 59.794 52.381 26.20 8.61 36.98 4.69
2490 2559 0.249398 ATACACCTGGTGCTTCCGTC 59.751 55.000 26.20 0.00 36.98 4.79
2491 2560 1.116536 TACACCTGGTGCTTCCGTCA 61.117 55.000 26.20 0.00 36.98 4.35
2492 2561 1.227823 CACCTGGTGCTTCCGTCAA 60.228 57.895 14.87 0.00 39.52 3.18
2493 2562 1.227853 ACCTGGTGCTTCCGTCAAC 60.228 57.895 0.00 0.00 39.52 3.18
2494 2563 1.071471 CCTGGTGCTTCCGTCAACT 59.929 57.895 0.00 0.00 39.52 3.16
2495 2564 0.320374 CCTGGTGCTTCCGTCAACTA 59.680 55.000 0.00 0.00 39.52 2.24
2496 2565 1.066143 CCTGGTGCTTCCGTCAACTAT 60.066 52.381 0.00 0.00 39.52 2.12
2497 2566 2.167693 CCTGGTGCTTCCGTCAACTATA 59.832 50.000 0.00 0.00 39.52 1.31
2498 2567 3.369052 CCTGGTGCTTCCGTCAACTATAA 60.369 47.826 0.00 0.00 39.52 0.98
2499 2568 4.250464 CTGGTGCTTCCGTCAACTATAAA 58.750 43.478 0.00 0.00 39.52 1.40
2500 2569 4.643463 TGGTGCTTCCGTCAACTATAAAA 58.357 39.130 0.00 0.00 39.52 1.52
2501 2570 5.250200 TGGTGCTTCCGTCAACTATAAAAT 58.750 37.500 0.00 0.00 39.52 1.82
2502 2571 5.708230 TGGTGCTTCCGTCAACTATAAAATT 59.292 36.000 0.00 0.00 39.52 1.82
2503 2572 6.027749 GGTGCTTCCGTCAACTATAAAATTG 58.972 40.000 0.00 0.00 0.00 2.32
2504 2573 5.511729 GTGCTTCCGTCAACTATAAAATTGC 59.488 40.000 0.00 0.00 0.00 3.56
2505 2574 5.182190 TGCTTCCGTCAACTATAAAATTGCA 59.818 36.000 0.00 0.00 0.00 4.08
2506 2575 6.090129 GCTTCCGTCAACTATAAAATTGCAA 58.910 36.000 0.00 0.00 0.00 4.08
2507 2576 6.584563 GCTTCCGTCAACTATAAAATTGCAAA 59.415 34.615 1.71 0.00 0.00 3.68
2508 2577 7.115663 GCTTCCGTCAACTATAAAATTGCAAAA 59.884 33.333 1.71 0.00 0.00 2.44
2509 2578 7.861176 TCCGTCAACTATAAAATTGCAAAAC 57.139 32.000 1.71 0.00 0.00 2.43
2510 2579 7.426410 TCCGTCAACTATAAAATTGCAAAACA 58.574 30.769 1.71 0.00 0.00 2.83
2511 2580 7.921214 TCCGTCAACTATAAAATTGCAAAACAA 59.079 29.630 1.71 0.00 44.01 2.83
2512 2581 8.543774 CCGTCAACTATAAAATTGCAAAACAAA 58.456 29.630 1.71 0.00 42.86 2.83
2513 2582 9.907576 CGTCAACTATAAAATTGCAAAACAAAA 57.092 25.926 1.71 0.00 42.86 2.44
2522 2591 7.516481 AAAATTGCAAAACAAAACAATTTGGC 58.484 26.923 1.71 0.00 46.51 4.52
2523 2592 7.172019 AAAATTGCAAAACAAAACAATTTGGCA 59.828 25.926 1.71 0.00 46.51 4.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 2.481276 CCGATTCCAGTGATGCGTCTAA 60.481 50.000 7.58 0.00 0.00 2.10
19 20 0.912487 ACTGCCTAACCCCGATTCCA 60.912 55.000 0.00 0.00 0.00 3.53
25 26 0.391263 GTTCTCACTGCCTAACCCCG 60.391 60.000 0.00 0.00 0.00 5.73
62 63 3.819877 GACGAGGCGGTGGTGGTTT 62.820 63.158 0.00 0.00 0.00 3.27
67 68 2.600769 AGAAGACGAGGCGGTGGT 60.601 61.111 0.00 0.00 0.00 4.16
77 78 1.269778 TGTGTCCTGCTTGAGAAGACG 60.270 52.381 0.00 0.00 0.00 4.18
120 122 4.217767 GGGGTCTTGCTTCGTTTTTAGATT 59.782 41.667 0.00 0.00 0.00 2.40
132 134 4.035102 GCGGGAGGGGTCTTGCTT 62.035 66.667 0.00 0.00 0.00 3.91
165 167 3.422303 CCATGGACGTGTGGTGCG 61.422 66.667 5.56 0.00 40.35 5.34
166 168 3.737172 GCCATGGACGTGTGGTGC 61.737 66.667 18.40 0.00 37.81 5.01
171 173 2.367202 CCTAGGGCCATGGACGTGT 61.367 63.158 23.33 7.02 0.00 4.49
173 175 2.768344 CCCTAGGGCCATGGACGT 60.768 66.667 18.60 18.60 0.00 4.34
211 213 0.943835 TTCCACATGCACTGTCGTCG 60.944 55.000 0.00 0.00 35.29 5.12
216 218 0.956633 CTGCTTTCCACATGCACTGT 59.043 50.000 0.00 0.00 39.20 3.55
218 220 1.531423 CTCTGCTTTCCACATGCACT 58.469 50.000 0.00 0.00 32.28 4.40
229 231 2.426842 GCATAGGGTTCCTCTGCTTT 57.573 50.000 14.52 0.00 46.08 3.51
246 248 2.821969 GCCTCATCTCCAAGAAAAAGCA 59.178 45.455 0.00 0.00 0.00 3.91
249 251 3.074412 GTCGCCTCATCTCCAAGAAAAA 58.926 45.455 0.00 0.00 0.00 1.94
271 273 4.849329 CCGCCGCCTCACGTAGAC 62.849 72.222 0.00 0.00 41.42 2.59
315 317 0.179045 AGAATGCCATACGTCCAGCC 60.179 55.000 0.00 0.00 0.00 4.85
475 491 5.739752 TGCCGTGATCTAATTCATGAAAG 57.260 39.130 13.09 6.52 35.10 2.62
476 492 6.698008 ATTGCCGTGATCTAATTCATGAAA 57.302 33.333 13.09 0.00 35.10 2.69
493 509 2.817258 TCAACAAAGACCCTAATTGCCG 59.183 45.455 0.00 0.00 0.00 5.69
517 533 9.489084 AGGTCCATTTAACTTTTCTTTAAATGC 57.511 29.630 16.77 8.37 46.43 3.56
526 542 7.375834 CCCTGTTTAGGTCCATTTAACTTTTC 58.624 38.462 0.00 0.00 42.96 2.29
553 569 1.227664 CCCTCCCTCTCTAGTGCGA 59.772 63.158 0.00 0.00 0.00 5.10
556 572 2.944129 CTCTTCCCTCCCTCTCTAGTG 58.056 57.143 0.00 0.00 0.00 2.74
562 578 0.973496 GTTCGCTCTTCCCTCCCTCT 60.973 60.000 0.00 0.00 0.00 3.69
565 581 2.291043 TGGTTCGCTCTTCCCTCCC 61.291 63.158 0.00 0.00 0.00 4.30
569 585 1.079057 GAGGTGGTTCGCTCTTCCC 60.079 63.158 0.00 0.00 0.00 3.97
570 586 1.079057 GGAGGTGGTTCGCTCTTCC 60.079 63.158 0.00 0.00 0.00 3.46
574 590 1.262640 TTAGGGGAGGTGGTTCGCTC 61.263 60.000 0.00 0.00 0.00 5.03
618 671 7.656542 CCCCGTTTGCCTTTTAATTACTTTTTA 59.343 33.333 0.00 0.00 0.00 1.52
643 697 1.068748 CATGCTGCGCAAATCTATCCC 60.069 52.381 13.05 0.00 43.62 3.85
682 736 4.444449 GGACGCTGGGAGTAGGATATTTTT 60.444 45.833 0.00 0.00 0.00 1.94
713 767 4.705023 AGCTTACCATTTTTAACAGGCGAT 59.295 37.500 0.00 0.00 0.00 4.58
717 771 5.478407 CCCAAGCTTACCATTTTTAACAGG 58.522 41.667 0.00 0.00 0.00 4.00
718 772 4.929211 GCCCAAGCTTACCATTTTTAACAG 59.071 41.667 0.00 0.00 35.50 3.16
797 851 2.126502 CACAACGGAAATGGCGGC 60.127 61.111 0.00 0.00 0.00 6.53
815 869 2.768492 GGGGCTCGCTGCATGAAAG 61.768 63.158 0.00 0.00 45.15 2.62
848 902 3.390819 GAGGAGGAAGGGGGTAAATACA 58.609 50.000 0.00 0.00 0.00 2.29
862 920 2.050836 TTTTGCTGCACGGAGGAGGA 62.051 55.000 0.00 0.00 35.99 3.71
978 1036 9.088987 CCCATGGCTGGTTTATTTACTTATTAT 57.911 33.333 6.09 0.00 41.37 1.28
979 1037 7.507616 CCCCATGGCTGGTTTATTTACTTATTA 59.492 37.037 6.09 0.00 41.37 0.98
980 1038 6.326323 CCCCATGGCTGGTTTATTTACTTATT 59.674 38.462 6.09 0.00 41.37 1.40
981 1039 5.838521 CCCCATGGCTGGTTTATTTACTTAT 59.161 40.000 6.09 0.00 41.37 1.73
1182 1240 2.594013 TGCATGTTCAGCACCGCA 60.594 55.556 0.00 0.00 37.02 5.69
1189 1247 1.959899 GCGTCGACCTGCATGTTCAG 61.960 60.000 10.58 0.00 0.00 3.02
1369 1427 1.613317 ATCATGGCTCGGACCGTTGA 61.613 55.000 14.79 10.56 0.00 3.18
1374 1432 1.596477 GCTCATCATGGCTCGGACC 60.596 63.158 0.00 0.00 0.00 4.46
1439 1497 3.031417 ATGGGGTTCTTCTCGCCGG 62.031 63.158 0.00 0.00 40.16 6.13
1443 1501 0.107654 GGTCCATGGGGTTCTTCTCG 60.108 60.000 13.02 0.00 34.93 4.04
1512 1570 7.305813 AGCTCTATGAGATCAGATCATGTTT 57.694 36.000 13.14 0.00 37.91 2.83
1523 1581 4.455533 ACGAGATGTGAGCTCTATGAGATC 59.544 45.833 16.19 7.97 44.25 2.75
1532 1590 2.601979 CGATGAGACGAGATGTGAGCTC 60.602 54.545 6.82 6.82 35.09 4.09
1535 1593 1.943340 TCCGATGAGACGAGATGTGAG 59.057 52.381 0.00 0.00 35.09 3.51
1597 1655 2.403378 TTAACGGCAGCGGCAATCC 61.403 57.895 11.88 0.00 43.71 3.01
1660 1718 9.884465 AAACAAAAAGATGAGACGAATAGAAAG 57.116 29.630 0.00 0.00 0.00 2.62
1664 1722 7.898309 CGGTAAACAAAAAGATGAGACGAATAG 59.102 37.037 0.00 0.00 0.00 1.73
1666 1724 6.348213 CCGGTAAACAAAAAGATGAGACGAAT 60.348 38.462 0.00 0.00 0.00 3.34
1679 1737 4.200874 ACACATCTCACCGGTAAACAAAA 58.799 39.130 6.87 0.00 0.00 2.44
1680 1738 3.811083 ACACATCTCACCGGTAAACAAA 58.189 40.909 6.87 0.00 0.00 2.83
1681 1739 3.478857 ACACATCTCACCGGTAAACAA 57.521 42.857 6.87 0.00 0.00 2.83
1740 1798 6.313905 ACAGCGGTATCAGAATTTAGAAACAG 59.686 38.462 0.00 0.00 0.00 3.16
1772 1830 4.401022 AGAAAAAGATCCACAGATGCACA 58.599 39.130 0.00 0.00 30.90 4.57
1818 1876 9.844257 TTTCATAATAAAAATGGGGCTATTTGG 57.156 29.630 2.03 0.00 31.05 3.28
1824 1882 9.445973 TCCTATTTTCATAATAAAAATGGGGCT 57.554 29.630 17.95 0.00 46.53 5.19
1825 1883 9.710900 CTCCTATTTTCATAATAAAAATGGGGC 57.289 33.333 17.95 0.00 46.53 5.80
1843 1903 4.631813 GTGTTGCGATTGAGACTCCTATTT 59.368 41.667 0.00 0.00 0.00 1.40
1855 1915 1.082169 CGGTGTGGTGTTGCGATTG 60.082 57.895 0.00 0.00 0.00 2.67
1858 1927 1.306642 AAAACGGTGTGGTGTTGCGA 61.307 50.000 0.00 0.00 0.00 5.10
1873 1942 4.883585 TGATGCATCAGGTATGAGGAAAAC 59.116 41.667 25.42 0.00 39.62 2.43
1881 1950 1.143481 TGGGGTGATGCATCAGGTATG 59.857 52.381 29.38 0.00 37.51 2.39
1882 1951 1.143684 GTGGGGTGATGCATCAGGTAT 59.856 52.381 29.38 0.00 37.51 2.73
1883 1952 0.546122 GTGGGGTGATGCATCAGGTA 59.454 55.000 29.38 13.35 37.51 3.08
1948 2017 2.496899 AGTGGATGTTTCGGCATTCT 57.503 45.000 0.00 0.00 0.00 2.40
1949 2018 3.270877 AGTAGTGGATGTTTCGGCATTC 58.729 45.455 0.00 0.00 0.00 2.67
1950 2019 3.350219 AGTAGTGGATGTTTCGGCATT 57.650 42.857 0.00 0.00 0.00 3.56
1956 2025 6.547880 TCTCTCTCCATAGTAGTGGATGTTTC 59.452 42.308 0.00 0.00 46.67 2.78
1959 2028 5.630121 CTCTCTCTCCATAGTAGTGGATGT 58.370 45.833 0.00 0.00 46.67 3.06
2023 2092 6.403866 TTCATGTTATGGACTTGCTTTTGT 57.596 33.333 0.00 0.00 34.37 2.83
2032 2101 4.159693 TCGTAGTGCTTCATGTTATGGACT 59.840 41.667 0.00 1.50 0.00 3.85
2036 2105 6.476706 TCTGATTCGTAGTGCTTCATGTTATG 59.523 38.462 0.00 0.00 0.00 1.90
2041 2110 4.428209 AGTCTGATTCGTAGTGCTTCATG 58.572 43.478 0.00 0.00 0.00 3.07
2042 2111 4.727507 AGTCTGATTCGTAGTGCTTCAT 57.272 40.909 0.00 0.00 0.00 2.57
2047 2116 4.617808 TCAGTAGTCTGATTCGTAGTGC 57.382 45.455 0.00 0.00 44.58 4.40
2058 2127 5.590530 AGGAAGCACTTATCAGTAGTCTG 57.409 43.478 0.00 0.00 42.54 3.51
2059 2128 7.063593 TGATAGGAAGCACTTATCAGTAGTCT 58.936 38.462 10.13 0.00 40.80 3.24
2060 2129 7.278461 TGATAGGAAGCACTTATCAGTAGTC 57.722 40.000 10.13 0.00 40.80 2.59
2066 2135 6.155221 ACAAGTCTGATAGGAAGCACTTATCA 59.845 38.462 12.43 12.43 42.50 2.15
2067 2136 6.578023 ACAAGTCTGATAGGAAGCACTTATC 58.422 40.000 6.25 6.25 37.85 1.75
2068 2137 6.552445 ACAAGTCTGATAGGAAGCACTTAT 57.448 37.500 0.00 0.00 0.00 1.73
2069 2138 6.096987 CCTACAAGTCTGATAGGAAGCACTTA 59.903 42.308 4.29 0.00 38.20 2.24
2070 2139 4.899352 ACAAGTCTGATAGGAAGCACTT 57.101 40.909 0.00 0.00 0.00 3.16
2071 2140 4.404073 CCTACAAGTCTGATAGGAAGCACT 59.596 45.833 4.29 0.00 38.20 4.40
2072 2141 4.160626 ACCTACAAGTCTGATAGGAAGCAC 59.839 45.833 14.11 0.00 38.20 4.40
2073 2142 4.160439 CACCTACAAGTCTGATAGGAAGCA 59.840 45.833 14.11 0.00 38.20 3.91
2074 2143 4.402793 TCACCTACAAGTCTGATAGGAAGC 59.597 45.833 14.11 0.00 38.20 3.86
2075 2144 5.163499 GGTCACCTACAAGTCTGATAGGAAG 60.163 48.000 14.11 7.95 38.20 3.46
2076 2145 4.710375 GGTCACCTACAAGTCTGATAGGAA 59.290 45.833 14.11 2.64 38.20 3.36
2077 2146 4.279145 GGTCACCTACAAGTCTGATAGGA 58.721 47.826 14.11 0.00 38.20 2.94
2078 2147 3.385111 GGGTCACCTACAAGTCTGATAGG 59.615 52.174 0.00 7.77 41.21 2.57
2079 2148 4.023980 TGGGTCACCTACAAGTCTGATAG 58.976 47.826 0.00 0.00 37.76 2.08
2080 2149 4.023980 CTGGGTCACCTACAAGTCTGATA 58.976 47.826 0.00 0.00 37.76 2.15
2081 2150 2.834549 CTGGGTCACCTACAAGTCTGAT 59.165 50.000 0.00 0.00 37.76 2.90
2082 2151 2.248248 CTGGGTCACCTACAAGTCTGA 58.752 52.381 0.00 0.00 37.76 3.27
2083 2152 1.276421 CCTGGGTCACCTACAAGTCTG 59.724 57.143 0.00 0.00 37.76 3.51
2084 2153 1.149288 TCCTGGGTCACCTACAAGTCT 59.851 52.381 0.00 0.00 37.76 3.24
2085 2154 1.640917 TCCTGGGTCACCTACAAGTC 58.359 55.000 0.00 0.00 37.76 3.01
2086 2155 2.344093 ATCCTGGGTCACCTACAAGT 57.656 50.000 0.00 0.00 37.76 3.16
2087 2156 4.837093 TTAATCCTGGGTCACCTACAAG 57.163 45.455 0.00 0.00 37.76 3.16
2088 2157 5.163077 TGTTTTAATCCTGGGTCACCTACAA 60.163 40.000 0.00 0.00 37.76 2.41
2089 2158 4.351407 TGTTTTAATCCTGGGTCACCTACA 59.649 41.667 0.00 0.00 37.76 2.74
2090 2159 4.913784 TGTTTTAATCCTGGGTCACCTAC 58.086 43.478 0.00 0.00 37.76 3.18
2091 2160 5.586155 TTGTTTTAATCCTGGGTCACCTA 57.414 39.130 0.00 0.00 37.76 3.08
2092 2161 4.463050 TTGTTTTAATCCTGGGTCACCT 57.537 40.909 0.00 0.00 37.76 4.00
2093 2162 4.830600 TCTTTGTTTTAATCCTGGGTCACC 59.169 41.667 0.00 0.00 37.24 4.02
2094 2163 6.590234 ATCTTTGTTTTAATCCTGGGTCAC 57.410 37.500 0.00 0.00 0.00 3.67
2095 2164 8.893563 AATATCTTTGTTTTAATCCTGGGTCA 57.106 30.769 0.00 0.00 0.00 4.02
2096 2165 8.129211 CGAATATCTTTGTTTTAATCCTGGGTC 58.871 37.037 0.00 0.00 0.00 4.46
2097 2166 7.614192 ACGAATATCTTTGTTTTAATCCTGGGT 59.386 33.333 0.00 0.00 0.00 4.51
2098 2167 7.996385 ACGAATATCTTTGTTTTAATCCTGGG 58.004 34.615 0.00 0.00 0.00 4.45
2099 2168 8.129211 GGACGAATATCTTTGTTTTAATCCTGG 58.871 37.037 0.00 0.00 0.00 4.45
2100 2169 7.850982 CGGACGAATATCTTTGTTTTAATCCTG 59.149 37.037 0.00 0.00 0.00 3.86
2101 2170 7.767198 TCGGACGAATATCTTTGTTTTAATCCT 59.233 33.333 0.00 0.00 0.00 3.24
2102 2171 7.912383 TCGGACGAATATCTTTGTTTTAATCC 58.088 34.615 0.00 0.00 0.00 3.01
2103 2172 9.582223 GATCGGACGAATATCTTTGTTTTAATC 57.418 33.333 0.00 0.00 0.00 1.75
2104 2173 9.326413 AGATCGGACGAATATCTTTGTTTTAAT 57.674 29.630 0.00 0.00 0.00 1.40
2105 2174 8.712285 AGATCGGACGAATATCTTTGTTTTAA 57.288 30.769 0.00 0.00 0.00 1.52
2106 2175 9.459640 CTAGATCGGACGAATATCTTTGTTTTA 57.540 33.333 0.00 0.00 32.39 1.52
2107 2176 7.980099 ACTAGATCGGACGAATATCTTTGTTTT 59.020 33.333 0.00 0.00 32.39 2.43
2108 2177 7.490000 ACTAGATCGGACGAATATCTTTGTTT 58.510 34.615 0.00 0.00 32.39 2.83
2109 2178 7.040473 ACTAGATCGGACGAATATCTTTGTT 57.960 36.000 0.00 0.00 32.39 2.83
2110 2179 6.636562 ACTAGATCGGACGAATATCTTTGT 57.363 37.500 0.00 0.00 32.39 2.83
2111 2180 7.119407 TCCTACTAGATCGGACGAATATCTTTG 59.881 40.741 0.00 0.00 32.39 2.77
2112 2181 7.166851 TCCTACTAGATCGGACGAATATCTTT 58.833 38.462 0.00 0.00 32.39 2.52
2113 2182 6.709281 TCCTACTAGATCGGACGAATATCTT 58.291 40.000 0.00 0.00 32.39 2.40
2114 2183 6.297080 TCCTACTAGATCGGACGAATATCT 57.703 41.667 0.00 0.00 34.44 1.98
2115 2184 6.981762 TTCCTACTAGATCGGACGAATATC 57.018 41.667 0.00 0.00 0.00 1.63
2116 2185 6.374894 CCTTTCCTACTAGATCGGACGAATAT 59.625 42.308 0.00 0.00 0.00 1.28
2117 2186 5.704515 CCTTTCCTACTAGATCGGACGAATA 59.295 44.000 0.00 0.00 0.00 1.75
2118 2187 4.519730 CCTTTCCTACTAGATCGGACGAAT 59.480 45.833 0.00 0.00 0.00 3.34
2119 2188 3.881688 CCTTTCCTACTAGATCGGACGAA 59.118 47.826 0.00 0.00 0.00 3.85
2120 2189 3.474600 CCTTTCCTACTAGATCGGACGA 58.525 50.000 0.00 0.00 0.00 4.20
2121 2190 2.553172 CCCTTTCCTACTAGATCGGACG 59.447 54.545 0.00 0.00 0.00 4.79
2122 2191 3.564264 ACCCTTTCCTACTAGATCGGAC 58.436 50.000 0.00 0.00 0.00 4.79
2123 2192 3.203710 TGACCCTTTCCTACTAGATCGGA 59.796 47.826 0.00 0.00 0.00 4.55
2124 2193 3.563223 TGACCCTTTCCTACTAGATCGG 58.437 50.000 0.00 0.00 0.00 4.18
2125 2194 3.570550 CCTGACCCTTTCCTACTAGATCG 59.429 52.174 0.00 0.00 0.00 3.69
2126 2195 3.322541 GCCTGACCCTTTCCTACTAGATC 59.677 52.174 0.00 0.00 0.00 2.75
2127 2196 3.310193 GCCTGACCCTTTCCTACTAGAT 58.690 50.000 0.00 0.00 0.00 1.98
2128 2197 2.748388 GCCTGACCCTTTCCTACTAGA 58.252 52.381 0.00 0.00 0.00 2.43
2129 2198 1.409427 CGCCTGACCCTTTCCTACTAG 59.591 57.143 0.00 0.00 0.00 2.57
2130 2199 1.272872 ACGCCTGACCCTTTCCTACTA 60.273 52.381 0.00 0.00 0.00 1.82
2131 2200 0.544595 ACGCCTGACCCTTTCCTACT 60.545 55.000 0.00 0.00 0.00 2.57
2132 2201 0.108281 GACGCCTGACCCTTTCCTAC 60.108 60.000 0.00 0.00 0.00 3.18
2133 2202 1.601419 CGACGCCTGACCCTTTCCTA 61.601 60.000 0.00 0.00 0.00 2.94
2134 2203 2.943978 CGACGCCTGACCCTTTCCT 61.944 63.158 0.00 0.00 0.00 3.36
2135 2204 2.434359 CGACGCCTGACCCTTTCC 60.434 66.667 0.00 0.00 0.00 3.13
2136 2205 2.027625 CACGACGCCTGACCCTTTC 61.028 63.158 0.00 0.00 0.00 2.62
2137 2206 1.466025 TACACGACGCCTGACCCTTT 61.466 55.000 0.00 0.00 0.00 3.11
2138 2207 1.874345 CTACACGACGCCTGACCCTT 61.874 60.000 0.00 0.00 0.00 3.95
2139 2208 2.282674 TACACGACGCCTGACCCT 60.283 61.111 0.00 0.00 0.00 4.34
2140 2209 2.151049 AACTACACGACGCCTGACCC 62.151 60.000 0.00 0.00 0.00 4.46
2141 2210 0.319297 AAACTACACGACGCCTGACC 60.319 55.000 0.00 0.00 0.00 4.02
2142 2211 1.058404 GAAACTACACGACGCCTGAC 58.942 55.000 0.00 0.00 0.00 3.51
2143 2212 0.956633 AGAAACTACACGACGCCTGA 59.043 50.000 0.00 0.00 0.00 3.86
2144 2213 1.779569 AAGAAACTACACGACGCCTG 58.220 50.000 0.00 0.00 0.00 4.85
2145 2214 2.401351 GAAAGAAACTACACGACGCCT 58.599 47.619 0.00 0.00 0.00 5.52
2146 2215 1.458445 GGAAAGAAACTACACGACGCC 59.542 52.381 0.00 0.00 0.00 5.68
2147 2216 2.155155 CAGGAAAGAAACTACACGACGC 59.845 50.000 0.00 0.00 0.00 5.19
2148 2217 3.378339 ACAGGAAAGAAACTACACGACG 58.622 45.455 0.00 0.00 0.00 5.12
2149 2218 5.527033 ACTACAGGAAAGAAACTACACGAC 58.473 41.667 0.00 0.00 0.00 4.34
2150 2219 5.779529 ACTACAGGAAAGAAACTACACGA 57.220 39.130 0.00 0.00 0.00 4.35
2151 2220 8.530269 AATTACTACAGGAAAGAAACTACACG 57.470 34.615 0.00 0.00 0.00 4.49
2153 2222 9.630098 CGTAATTACTACAGGAAAGAAACTACA 57.370 33.333 13.56 0.00 0.00 2.74
2154 2223 9.631452 ACGTAATTACTACAGGAAAGAAACTAC 57.369 33.333 13.56 0.00 0.00 2.73
2155 2224 9.630098 CACGTAATTACTACAGGAAAGAAACTA 57.370 33.333 13.56 0.00 0.00 2.24
2156 2225 7.117379 GCACGTAATTACTACAGGAAAGAAACT 59.883 37.037 13.56 0.00 0.00 2.66
2157 2226 7.117379 AGCACGTAATTACTACAGGAAAGAAAC 59.883 37.037 13.56 0.00 0.00 2.78
2158 2227 7.156673 AGCACGTAATTACTACAGGAAAGAAA 58.843 34.615 13.56 0.00 0.00 2.52
2159 2228 6.694447 AGCACGTAATTACTACAGGAAAGAA 58.306 36.000 13.56 0.00 0.00 2.52
2160 2229 6.276832 AGCACGTAATTACTACAGGAAAGA 57.723 37.500 13.56 0.00 0.00 2.52
2161 2230 6.963049 AAGCACGTAATTACTACAGGAAAG 57.037 37.500 13.56 0.00 0.00 2.62
2162 2231 6.089820 CGAAAGCACGTAATTACTACAGGAAA 59.910 38.462 13.56 0.00 0.00 3.13
2163 2232 5.574055 CGAAAGCACGTAATTACTACAGGAA 59.426 40.000 13.56 0.00 0.00 3.36
2164 2233 5.097529 CGAAAGCACGTAATTACTACAGGA 58.902 41.667 13.56 0.00 0.00 3.86
2165 2234 4.266976 CCGAAAGCACGTAATTACTACAGG 59.733 45.833 13.56 0.44 0.00 4.00
2166 2235 4.860907 ACCGAAAGCACGTAATTACTACAG 59.139 41.667 13.56 0.80 0.00 2.74
2167 2236 4.808558 ACCGAAAGCACGTAATTACTACA 58.191 39.130 13.56 0.00 0.00 2.74
2168 2237 6.528072 AGTTACCGAAAGCACGTAATTACTAC 59.472 38.462 13.56 3.13 0.00 2.73
2169 2238 6.620678 AGTTACCGAAAGCACGTAATTACTA 58.379 36.000 13.56 0.00 0.00 1.82
2170 2239 5.473039 AGTTACCGAAAGCACGTAATTACT 58.527 37.500 13.56 0.00 0.00 2.24
2171 2240 5.768333 AGTTACCGAAAGCACGTAATTAC 57.232 39.130 5.47 5.47 0.00 1.89
2172 2241 7.222611 GGATTAGTTACCGAAAGCACGTAATTA 59.777 37.037 0.00 0.00 0.00 1.40
2173 2242 6.036408 GGATTAGTTACCGAAAGCACGTAATT 59.964 38.462 0.00 0.00 0.00 1.40
2174 2243 5.521372 GGATTAGTTACCGAAAGCACGTAAT 59.479 40.000 0.00 0.00 0.00 1.89
2175 2244 4.864247 GGATTAGTTACCGAAAGCACGTAA 59.136 41.667 0.00 0.00 0.00 3.18
2176 2245 4.158394 AGGATTAGTTACCGAAAGCACGTA 59.842 41.667 0.00 0.00 0.00 3.57
2177 2246 3.056322 AGGATTAGTTACCGAAAGCACGT 60.056 43.478 0.00 0.00 0.00 4.49
2178 2247 3.306166 CAGGATTAGTTACCGAAAGCACG 59.694 47.826 0.00 0.00 0.00 5.34
2179 2248 4.251268 ACAGGATTAGTTACCGAAAGCAC 58.749 43.478 0.00 0.00 0.00 4.40
2180 2249 4.546829 ACAGGATTAGTTACCGAAAGCA 57.453 40.909 0.00 0.00 0.00 3.91
2181 2250 5.048507 CCTACAGGATTAGTTACCGAAAGC 58.951 45.833 0.00 0.00 37.39 3.51
2182 2251 5.128335 ACCCTACAGGATTAGTTACCGAAAG 59.872 44.000 0.00 0.00 39.89 2.62
2183 2252 5.025453 ACCCTACAGGATTAGTTACCGAAA 58.975 41.667 0.00 0.00 39.89 3.46
2184 2253 4.613437 ACCCTACAGGATTAGTTACCGAA 58.387 43.478 0.00 0.00 39.89 4.30
2185 2254 4.079558 AGACCCTACAGGATTAGTTACCGA 60.080 45.833 0.00 0.00 39.89 4.69
2186 2255 4.213513 AGACCCTACAGGATTAGTTACCG 58.786 47.826 0.00 0.00 39.89 4.02
2187 2256 5.898397 AGAAGACCCTACAGGATTAGTTACC 59.102 44.000 0.00 0.00 39.89 2.85
2188 2257 6.834969 AGAGAAGACCCTACAGGATTAGTTAC 59.165 42.308 0.00 0.00 39.89 2.50
2189 2258 6.982899 AGAGAAGACCCTACAGGATTAGTTA 58.017 40.000 0.00 0.00 39.89 2.24
2190 2259 5.844601 AGAGAAGACCCTACAGGATTAGTT 58.155 41.667 0.00 0.00 39.89 2.24
2191 2260 5.451354 GAGAGAAGACCCTACAGGATTAGT 58.549 45.833 0.00 0.00 39.89 2.24
2192 2261 4.830600 GGAGAGAAGACCCTACAGGATTAG 59.169 50.000 0.00 0.00 39.89 1.73
2193 2262 4.689150 CGGAGAGAAGACCCTACAGGATTA 60.689 50.000 0.00 0.00 39.89 1.75
2194 2263 3.648739 GGAGAGAAGACCCTACAGGATT 58.351 50.000 0.00 0.00 39.89 3.01
2195 2264 2.423660 CGGAGAGAAGACCCTACAGGAT 60.424 54.545 0.00 0.00 39.89 3.24
2196 2265 1.064611 CGGAGAGAAGACCCTACAGGA 60.065 57.143 0.00 0.00 39.89 3.86
2197 2266 1.394618 CGGAGAGAAGACCCTACAGG 58.605 60.000 0.00 0.00 43.78 4.00
2198 2267 1.394618 CCGGAGAGAAGACCCTACAG 58.605 60.000 0.00 0.00 0.00 2.74
2199 2268 0.683504 GCCGGAGAGAAGACCCTACA 60.684 60.000 5.05 0.00 0.00 2.74
2200 2269 1.393487 GGCCGGAGAGAAGACCCTAC 61.393 65.000 5.05 0.00 0.00 3.18
2201 2270 1.076192 GGCCGGAGAGAAGACCCTA 60.076 63.158 5.05 0.00 0.00 3.53
2202 2271 2.364448 GGCCGGAGAGAAGACCCT 60.364 66.667 5.05 0.00 0.00 4.34
2203 2272 3.839432 CGGCCGGAGAGAAGACCC 61.839 72.222 20.10 0.00 0.00 4.46
2204 2273 4.516195 GCGGCCGGAGAGAAGACC 62.516 72.222 29.38 1.03 0.00 3.85
2205 2274 1.664321 TTAGCGGCCGGAGAGAAGAC 61.664 60.000 29.38 6.37 0.00 3.01
2206 2275 1.379443 TTAGCGGCCGGAGAGAAGA 60.379 57.895 29.38 0.00 0.00 2.87
2207 2276 1.227002 GTTAGCGGCCGGAGAGAAG 60.227 63.158 29.38 0.00 0.00 2.85
2208 2277 2.718073 GGTTAGCGGCCGGAGAGAA 61.718 63.158 29.38 0.00 0.00 2.87
2209 2278 3.145551 GGTTAGCGGCCGGAGAGA 61.146 66.667 29.38 0.00 0.00 3.10
2210 2279 3.140225 GAGGTTAGCGGCCGGAGAG 62.140 68.421 29.38 0.00 0.00 3.20
2211 2280 3.145551 GAGGTTAGCGGCCGGAGA 61.146 66.667 29.38 0.00 0.00 3.71
2212 2281 3.140225 GAGAGGTTAGCGGCCGGAG 62.140 68.421 29.38 0.00 0.00 4.63
2213 2282 2.274948 TAGAGAGGTTAGCGGCCGGA 62.275 60.000 29.38 0.00 0.00 5.14
2214 2283 1.826921 TAGAGAGGTTAGCGGCCGG 60.827 63.158 29.38 8.95 0.00 6.13
2215 2284 1.359475 GTAGAGAGGTTAGCGGCCG 59.641 63.158 24.05 24.05 0.00 6.13
2216 2285 1.359475 CGTAGAGAGGTTAGCGGCC 59.641 63.158 0.00 0.00 0.00 6.13
2217 2286 1.299240 GCGTAGAGAGGTTAGCGGC 60.299 63.158 0.00 0.00 0.00 6.53
2218 2287 0.308376 GAGCGTAGAGAGGTTAGCGG 59.692 60.000 0.00 0.00 0.00 5.52
2219 2288 1.301423 AGAGCGTAGAGAGGTTAGCG 58.699 55.000 0.00 0.00 0.00 4.26
2220 2289 3.469739 AGTAGAGCGTAGAGAGGTTAGC 58.530 50.000 0.00 0.00 0.00 3.09
2221 2290 7.733402 AATTAGTAGAGCGTAGAGAGGTTAG 57.267 40.000 0.00 0.00 0.00 2.34
2222 2291 7.383572 CGTAATTAGTAGAGCGTAGAGAGGTTA 59.616 40.741 0.00 0.00 0.00 2.85
2223 2292 6.202570 CGTAATTAGTAGAGCGTAGAGAGGTT 59.797 42.308 0.00 0.00 0.00 3.50
2224 2293 5.695816 CGTAATTAGTAGAGCGTAGAGAGGT 59.304 44.000 0.00 0.00 0.00 3.85
2225 2294 5.389725 GCGTAATTAGTAGAGCGTAGAGAGG 60.390 48.000 0.00 0.00 0.00 3.69
2226 2295 5.610975 GCGTAATTAGTAGAGCGTAGAGAG 58.389 45.833 0.00 0.00 0.00 3.20
2227 2296 4.149571 CGCGTAATTAGTAGAGCGTAGAGA 59.850 45.833 0.00 0.00 42.26 3.10
2228 2297 4.384529 CGCGTAATTAGTAGAGCGTAGAG 58.615 47.826 0.00 0.00 42.26 2.43
2229 2298 4.380839 CGCGTAATTAGTAGAGCGTAGA 57.619 45.455 0.00 0.00 42.26 2.59
2234 2303 2.974536 CTCAGCGCGTAATTAGTAGAGC 59.025 50.000 8.43 4.02 0.00 4.09
2235 2304 4.212213 ACTCAGCGCGTAATTAGTAGAG 57.788 45.455 8.43 4.83 0.00 2.43
2236 2305 4.318333 CGTACTCAGCGCGTAATTAGTAGA 60.318 45.833 8.43 0.00 0.00 2.59
2237 2306 3.898946 CGTACTCAGCGCGTAATTAGTAG 59.101 47.826 8.43 0.00 0.00 2.57
2238 2307 3.303329 CCGTACTCAGCGCGTAATTAGTA 60.303 47.826 8.43 6.42 0.00 1.82
2239 2308 2.540361 CCGTACTCAGCGCGTAATTAGT 60.540 50.000 8.43 7.43 0.00 2.24
2240 2309 2.041966 CCGTACTCAGCGCGTAATTAG 58.958 52.381 8.43 1.09 0.00 1.73
2241 2310 1.401552 ACCGTACTCAGCGCGTAATTA 59.598 47.619 8.43 0.00 0.00 1.40
2242 2311 0.171903 ACCGTACTCAGCGCGTAATT 59.828 50.000 8.43 0.00 0.00 1.40
2243 2312 1.016627 TACCGTACTCAGCGCGTAAT 58.983 50.000 8.43 0.00 0.00 1.89
2244 2313 0.801872 TTACCGTACTCAGCGCGTAA 59.198 50.000 8.43 0.00 0.00 3.18
2245 2314 1.016627 ATTACCGTACTCAGCGCGTA 58.983 50.000 8.43 0.00 0.00 4.42
2246 2315 0.524816 CATTACCGTACTCAGCGCGT 60.525 55.000 8.43 0.00 0.00 6.01
2247 2316 1.206745 CCATTACCGTACTCAGCGCG 61.207 60.000 0.00 0.00 0.00 6.86
2248 2317 0.101759 TCCATTACCGTACTCAGCGC 59.898 55.000 0.00 0.00 0.00 5.92
2249 2318 2.607282 GGATCCATTACCGTACTCAGCG 60.607 54.545 6.95 0.00 0.00 5.18
2250 2319 2.628657 AGGATCCATTACCGTACTCAGC 59.371 50.000 15.82 0.00 0.00 4.26
2251 2320 4.262079 GGAAGGATCCATTACCGTACTCAG 60.262 50.000 15.82 0.00 45.79 3.35
2252 2321 3.640029 GGAAGGATCCATTACCGTACTCA 59.360 47.826 15.82 0.00 45.79 3.41
2253 2322 4.254402 GGAAGGATCCATTACCGTACTC 57.746 50.000 15.82 0.00 45.79 2.59
2265 2334 2.320781 TCCTTGATCGAGGAAGGATCC 58.679 52.381 26.94 2.48 42.35 3.36
2272 2341 2.179427 TGCTTCTTCCTTGATCGAGGA 58.821 47.619 25.64 25.64 43.99 3.71
2273 2342 2.680312 TGCTTCTTCCTTGATCGAGG 57.320 50.000 21.75 21.75 38.20 4.63
2274 2343 3.790091 TCATGCTTCTTCCTTGATCGAG 58.210 45.455 2.59 2.59 0.00 4.04
2275 2344 3.893326 TCATGCTTCTTCCTTGATCGA 57.107 42.857 0.00 0.00 0.00 3.59
2276 2345 3.303857 GCATCATGCTTCTTCCTTGATCG 60.304 47.826 1.02 0.00 40.96 3.69
2277 2346 3.630769 TGCATCATGCTTCTTCCTTGATC 59.369 43.478 11.84 0.00 45.31 2.92
2278 2347 3.628008 TGCATCATGCTTCTTCCTTGAT 58.372 40.909 11.84 0.00 45.31 2.57
2279 2348 3.076079 TGCATCATGCTTCTTCCTTGA 57.924 42.857 11.84 0.00 45.31 3.02
2280 2349 3.706698 CATGCATCATGCTTCTTCCTTG 58.293 45.455 11.84 0.00 45.31 3.61
2291 2360 3.976169 TCAATGTCATGCATGCATCATG 58.024 40.909 30.07 20.79 43.91 3.07
2292 2361 3.636764 ACTCAATGTCATGCATGCATCAT 59.363 39.130 30.07 25.76 37.96 2.45
2293 2362 3.020984 ACTCAATGTCATGCATGCATCA 58.979 40.909 30.07 24.74 37.96 3.07
2294 2363 3.710326 ACTCAATGTCATGCATGCATC 57.290 42.857 30.07 19.96 37.96 3.91
2295 2364 5.784578 ATTACTCAATGTCATGCATGCAT 57.215 34.783 27.46 27.46 37.96 3.96
2296 2365 6.887626 ATATTACTCAATGTCATGCATGCA 57.112 33.333 25.04 25.04 37.96 3.96
2297 2366 7.358931 GCAAATATTACTCAATGTCATGCATGC 60.359 37.037 22.25 11.82 37.96 4.06
2298 2367 7.865889 AGCAAATATTACTCAATGTCATGCATG 59.134 33.333 21.07 21.07 37.96 4.06
2299 2368 7.948357 AGCAAATATTACTCAATGTCATGCAT 58.052 30.769 0.00 0.00 40.03 3.96
2300 2369 7.337480 AGCAAATATTACTCAATGTCATGCA 57.663 32.000 0.00 0.00 33.86 3.96
2301 2370 7.380602 GGAAGCAAATATTACTCAATGTCATGC 59.619 37.037 0.00 0.00 32.70 4.06
2302 2371 8.407832 TGGAAGCAAATATTACTCAATGTCATG 58.592 33.333 0.00 0.00 0.00 3.07
2303 2372 8.523915 TGGAAGCAAATATTACTCAATGTCAT 57.476 30.769 0.00 0.00 0.00 3.06
2304 2373 7.936496 TGGAAGCAAATATTACTCAATGTCA 57.064 32.000 0.00 0.00 0.00 3.58
2306 2375 9.851686 TCTATGGAAGCAAATATTACTCAATGT 57.148 29.630 0.00 0.00 0.00 2.71
2310 2379 9.905713 AGTTTCTATGGAAGCAAATATTACTCA 57.094 29.630 8.31 0.00 35.55 3.41
2317 2386 9.920946 AGGAATTAGTTTCTATGGAAGCAAATA 57.079 29.630 8.31 0.00 35.55 1.40
2318 2387 8.829373 AGGAATTAGTTTCTATGGAAGCAAAT 57.171 30.769 8.31 0.00 35.55 2.32
2319 2388 9.396022 CTAGGAATTAGTTTCTATGGAAGCAAA 57.604 33.333 8.31 0.00 35.55 3.68
2320 2389 8.548877 ACTAGGAATTAGTTTCTATGGAAGCAA 58.451 33.333 8.31 1.73 39.64 3.91
2321 2390 8.090788 ACTAGGAATTAGTTTCTATGGAAGCA 57.909 34.615 8.31 0.00 39.64 3.91
2338 2407 9.528018 CAACACACAAAATTTGTTACTAGGAAT 57.472 29.630 8.85 0.00 43.23 3.01
2339 2408 7.976734 CCAACACACAAAATTTGTTACTAGGAA 59.023 33.333 8.85 0.00 43.23 3.36
2340 2409 7.339721 TCCAACACACAAAATTTGTTACTAGGA 59.660 33.333 8.85 10.96 43.23 2.94
2341 2410 7.484975 TCCAACACACAAAATTTGTTACTAGG 58.515 34.615 8.85 8.94 43.23 3.02
2342 2411 8.918961 TTCCAACACACAAAATTTGTTACTAG 57.081 30.769 8.85 0.19 43.23 2.57
2343 2412 7.489757 GCTTCCAACACACAAAATTTGTTACTA 59.510 33.333 8.85 0.00 43.23 1.82
2344 2413 6.312672 GCTTCCAACACACAAAATTTGTTACT 59.687 34.615 8.85 0.00 43.23 2.24
2345 2414 6.091441 TGCTTCCAACACACAAAATTTGTTAC 59.909 34.615 8.85 0.00 43.23 2.50
2346 2415 6.166279 TGCTTCCAACACACAAAATTTGTTA 58.834 32.000 8.85 0.00 43.23 2.41
2347 2416 4.999950 TGCTTCCAACACACAAAATTTGTT 59.000 33.333 8.85 0.00 43.23 2.83
2348 2417 4.573900 TGCTTCCAACACACAAAATTTGT 58.426 34.783 5.41 5.41 46.75 2.83
2349 2418 5.738118 ATGCTTCCAACACACAAAATTTG 57.262 34.783 3.89 3.89 0.00 2.32
2350 2419 5.066246 CCAATGCTTCCAACACACAAAATTT 59.934 36.000 0.00 0.00 0.00 1.82
2351 2420 4.575645 CCAATGCTTCCAACACACAAAATT 59.424 37.500 0.00 0.00 0.00 1.82
2352 2421 4.128643 CCAATGCTTCCAACACACAAAAT 58.871 39.130 0.00 0.00 0.00 1.82
2353 2422 3.529533 CCAATGCTTCCAACACACAAAA 58.470 40.909 0.00 0.00 0.00 2.44
2354 2423 2.741228 GCCAATGCTTCCAACACACAAA 60.741 45.455 0.00 0.00 33.53 2.83
2355 2424 1.202510 GCCAATGCTTCCAACACACAA 60.203 47.619 0.00 0.00 33.53 3.33
2356 2425 0.388659 GCCAATGCTTCCAACACACA 59.611 50.000 0.00 0.00 33.53 3.72
2357 2426 0.388659 TGCCAATGCTTCCAACACAC 59.611 50.000 0.00 0.00 38.71 3.82
2358 2427 1.340088 ATGCCAATGCTTCCAACACA 58.660 45.000 0.00 0.00 38.71 3.72
2359 2428 2.070783 CAATGCCAATGCTTCCAACAC 58.929 47.619 0.00 0.00 38.71 3.32
2360 2429 1.693062 ACAATGCCAATGCTTCCAACA 59.307 42.857 0.00 0.00 38.71 3.33
2361 2430 2.460757 ACAATGCCAATGCTTCCAAC 57.539 45.000 0.00 0.00 38.71 3.77
2362 2431 2.289569 GGAACAATGCCAATGCTTCCAA 60.290 45.455 8.38 0.00 38.71 3.53
2363 2432 1.275856 GGAACAATGCCAATGCTTCCA 59.724 47.619 8.38 0.00 38.71 3.53
2364 2433 1.275856 TGGAACAATGCCAATGCTTCC 59.724 47.619 6.99 6.99 34.26 3.46
2365 2434 2.747396 TGGAACAATGCCAATGCTTC 57.253 45.000 0.00 0.00 34.26 3.86
2376 2445 9.429359 GATGAATTATCTAGTCGATGGAACAAT 57.571 33.333 0.00 0.00 35.58 2.71
2377 2446 8.421002 TGATGAATTATCTAGTCGATGGAACAA 58.579 33.333 0.00 0.00 38.23 2.83
2378 2447 7.951591 TGATGAATTATCTAGTCGATGGAACA 58.048 34.615 0.00 0.00 38.83 3.18
2379 2448 8.994429 ATGATGAATTATCTAGTCGATGGAAC 57.006 34.615 0.00 0.00 36.71 3.62
2380 2449 8.253810 GGATGATGAATTATCTAGTCGATGGAA 58.746 37.037 0.00 0.00 36.71 3.53
2381 2450 7.397192 TGGATGATGAATTATCTAGTCGATGGA 59.603 37.037 0.00 0.00 36.71 3.41
2382 2451 7.550712 TGGATGATGAATTATCTAGTCGATGG 58.449 38.462 0.00 0.00 36.71 3.51
2383 2452 8.867935 GTTGGATGATGAATTATCTAGTCGATG 58.132 37.037 0.00 0.00 36.71 3.84
2384 2453 8.811017 AGTTGGATGATGAATTATCTAGTCGAT 58.189 33.333 0.00 0.00 36.71 3.59
2385 2454 8.183104 AGTTGGATGATGAATTATCTAGTCGA 57.817 34.615 0.00 0.00 36.71 4.20
2386 2455 9.914131 TTAGTTGGATGATGAATTATCTAGTCG 57.086 33.333 0.00 0.00 36.71 4.18
2391 2460 9.911788 ACTGTTTAGTTGGATGATGAATTATCT 57.088 29.630 0.00 0.00 33.26 1.98
2392 2461 9.941664 CACTGTTTAGTTGGATGATGAATTATC 57.058 33.333 0.00 0.00 34.07 1.75
2393 2462 9.685276 TCACTGTTTAGTTGGATGATGAATTAT 57.315 29.630 0.00 0.00 34.07 1.28
2394 2463 9.685276 ATCACTGTTTAGTTGGATGATGAATTA 57.315 29.630 0.00 0.00 34.07 1.40
2395 2464 8.585471 ATCACTGTTTAGTTGGATGATGAATT 57.415 30.769 0.00 0.00 34.07 2.17
2396 2465 8.585471 AATCACTGTTTAGTTGGATGATGAAT 57.415 30.769 0.00 0.00 34.07 2.57
2397 2466 8.298854 CAAATCACTGTTTAGTTGGATGATGAA 58.701 33.333 0.00 0.00 34.07 2.57
2398 2467 7.448161 ACAAATCACTGTTTAGTTGGATGATGA 59.552 33.333 5.45 0.00 34.07 2.92
2399 2468 7.596494 ACAAATCACTGTTTAGTTGGATGATG 58.404 34.615 5.45 0.00 34.07 3.07
2400 2469 7.765695 ACAAATCACTGTTTAGTTGGATGAT 57.234 32.000 5.45 0.00 34.07 2.45
2401 2470 7.581213 AACAAATCACTGTTTAGTTGGATGA 57.419 32.000 5.45 0.00 36.05 2.92
2402 2471 7.382218 GGAAACAAATCACTGTTTAGTTGGATG 59.618 37.037 1.92 0.00 46.84 3.51
2403 2472 7.287696 AGGAAACAAATCACTGTTTAGTTGGAT 59.712 33.333 1.92 0.00 46.84 3.41
2404 2473 6.605594 AGGAAACAAATCACTGTTTAGTTGGA 59.394 34.615 1.92 0.00 46.84 3.53
2405 2474 6.805713 AGGAAACAAATCACTGTTTAGTTGG 58.194 36.000 1.92 0.00 46.84 3.77
2406 2475 7.973388 TGAAGGAAACAAATCACTGTTTAGTTG 59.027 33.333 1.92 0.19 46.84 3.16
2407 2476 8.062065 TGAAGGAAACAAATCACTGTTTAGTT 57.938 30.769 1.92 0.00 46.84 2.24
2408 2477 7.639113 TGAAGGAAACAAATCACTGTTTAGT 57.361 32.000 1.92 0.00 46.84 2.24
2409 2478 8.807581 GTTTGAAGGAAACAAATCACTGTTTAG 58.192 33.333 1.92 0.00 46.84 1.85
2410 2479 8.696410 GTTTGAAGGAAACAAATCACTGTTTA 57.304 30.769 1.92 0.00 46.84 2.01
2442 2511 7.751768 TTGAAACAAGTGGGAAAATGTTTTT 57.248 28.000 4.47 0.00 43.77 1.94
2443 2512 7.751768 TTTGAAACAAGTGGGAAAATGTTTT 57.248 28.000 4.47 0.00 43.77 2.43
2444 2513 7.446931 ACTTTTGAAACAAGTGGGAAAATGTTT 59.553 29.630 2.69 2.69 45.70 2.83
2445 2514 6.939730 ACTTTTGAAACAAGTGGGAAAATGTT 59.060 30.769 0.00 0.00 37.59 2.71
2446 2515 6.472016 ACTTTTGAAACAAGTGGGAAAATGT 58.528 32.000 0.00 0.00 33.04 2.71
2447 2516 6.983474 ACTTTTGAAACAAGTGGGAAAATG 57.017 33.333 0.00 0.00 33.04 2.32
2448 2517 9.758651 GTATACTTTTGAAACAAGTGGGAAAAT 57.241 29.630 0.00 0.00 35.95 1.82
2449 2518 8.750298 TGTATACTTTTGAAACAAGTGGGAAAA 58.250 29.630 4.17 0.00 35.95 2.29
2450 2519 8.192110 GTGTATACTTTTGAAACAAGTGGGAAA 58.808 33.333 4.17 0.00 35.95 3.13
2451 2520 7.201839 GGTGTATACTTTTGAAACAAGTGGGAA 60.202 37.037 4.17 0.00 35.95 3.97
2452 2521 6.263617 GGTGTATACTTTTGAAACAAGTGGGA 59.736 38.462 4.17 0.00 35.95 4.37
2453 2522 6.264518 AGGTGTATACTTTTGAAACAAGTGGG 59.735 38.462 4.17 0.00 35.95 4.61
2454 2523 7.138736 CAGGTGTATACTTTTGAAACAAGTGG 58.861 38.462 4.17 0.00 35.95 4.00
2455 2524 7.138736 CCAGGTGTATACTTTTGAAACAAGTG 58.861 38.462 4.17 0.00 35.95 3.16
2456 2525 6.831868 ACCAGGTGTATACTTTTGAAACAAGT 59.168 34.615 4.17 0.00 38.13 3.16
2457 2526 7.138736 CACCAGGTGTATACTTTTGAAACAAG 58.861 38.462 11.99 0.00 0.00 3.16
2458 2527 6.460399 GCACCAGGTGTATACTTTTGAAACAA 60.460 38.462 21.26 0.00 35.75 2.83
2459 2528 5.009210 GCACCAGGTGTATACTTTTGAAACA 59.991 40.000 21.26 0.00 35.75 2.83
2460 2529 5.240844 AGCACCAGGTGTATACTTTTGAAAC 59.759 40.000 21.26 0.00 35.75 2.78
2461 2530 5.381757 AGCACCAGGTGTATACTTTTGAAA 58.618 37.500 21.26 0.00 35.75 2.69
2462 2531 4.980573 AGCACCAGGTGTATACTTTTGAA 58.019 39.130 21.26 0.00 35.75 2.69
2463 2532 4.634012 AGCACCAGGTGTATACTTTTGA 57.366 40.909 21.26 0.00 35.75 2.69
2464 2533 4.156008 GGAAGCACCAGGTGTATACTTTTG 59.844 45.833 21.26 0.00 38.79 2.44
2465 2534 4.332828 GGAAGCACCAGGTGTATACTTTT 58.667 43.478 21.26 4.78 38.79 2.27
2466 2535 3.618997 CGGAAGCACCAGGTGTATACTTT 60.619 47.826 21.26 6.41 38.90 2.66
2467 2536 2.093658 CGGAAGCACCAGGTGTATACTT 60.094 50.000 21.26 14.77 38.90 2.24
2468 2537 1.480954 CGGAAGCACCAGGTGTATACT 59.519 52.381 21.26 6.54 38.90 2.12
2469 2538 1.206371 ACGGAAGCACCAGGTGTATAC 59.794 52.381 21.26 9.89 38.90 1.47
2470 2539 1.479323 GACGGAAGCACCAGGTGTATA 59.521 52.381 21.26 0.00 38.90 1.47
2471 2540 0.249398 GACGGAAGCACCAGGTGTAT 59.751 55.000 21.26 10.11 38.90 2.29
2472 2541 1.116536 TGACGGAAGCACCAGGTGTA 61.117 55.000 21.26 0.00 38.90 2.90
2473 2542 1.978455 TTGACGGAAGCACCAGGTGT 61.978 55.000 21.26 1.35 38.90 4.16
2474 2543 1.227823 TTGACGGAAGCACCAGGTG 60.228 57.895 16.16 16.16 38.90 4.00
2475 2544 1.227853 GTTGACGGAAGCACCAGGT 60.228 57.895 0.00 0.00 38.90 4.00
2476 2545 0.320374 TAGTTGACGGAAGCACCAGG 59.680 55.000 1.20 0.00 38.90 4.45
2477 2546 2.386661 ATAGTTGACGGAAGCACCAG 57.613 50.000 1.20 0.00 38.90 4.00
2478 2547 3.965379 TTATAGTTGACGGAAGCACCA 57.035 42.857 1.20 0.00 38.90 4.17
2479 2548 5.813080 ATTTTATAGTTGACGGAAGCACC 57.187 39.130 0.00 0.00 0.00 5.01
2480 2549 5.511729 GCAATTTTATAGTTGACGGAAGCAC 59.488 40.000 0.00 0.00 0.00 4.40
2481 2550 5.182190 TGCAATTTTATAGTTGACGGAAGCA 59.818 36.000 0.00 0.00 0.00 3.91
2482 2551 5.636837 TGCAATTTTATAGTTGACGGAAGC 58.363 37.500 0.00 0.00 0.00 3.86
2483 2552 8.424731 GTTTTGCAATTTTATAGTTGACGGAAG 58.575 33.333 0.00 0.00 0.00 3.46
2484 2553 7.921214 TGTTTTGCAATTTTATAGTTGACGGAA 59.079 29.630 0.00 0.00 0.00 4.30
2485 2554 7.426410 TGTTTTGCAATTTTATAGTTGACGGA 58.574 30.769 0.00 0.00 0.00 4.69
2486 2555 7.630470 TGTTTTGCAATTTTATAGTTGACGG 57.370 32.000 0.00 0.00 0.00 4.79
2487 2556 9.907576 TTTTGTTTTGCAATTTTATAGTTGACG 57.092 25.926 0.00 0.00 36.89 4.35
2496 2565 8.650714 GCCAAATTGTTTTGTTTTGCAATTTTA 58.349 25.926 0.00 0.00 44.24 1.52
2497 2566 7.172019 TGCCAAATTGTTTTGTTTTGCAATTTT 59.828 25.926 0.00 0.00 44.24 1.82
2498 2567 6.647895 TGCCAAATTGTTTTGTTTTGCAATTT 59.352 26.923 0.00 7.89 46.18 1.82
2499 2568 6.161381 TGCCAAATTGTTTTGTTTTGCAATT 58.839 28.000 0.00 0.00 40.55 2.32
2500 2569 5.717119 TGCCAAATTGTTTTGTTTTGCAAT 58.283 29.167 0.00 0.00 40.55 3.56
2501 2570 5.125100 TGCCAAATTGTTTTGTTTTGCAA 57.875 30.435 0.00 0.00 40.55 4.08
2502 2571 4.771590 TGCCAAATTGTTTTGTTTTGCA 57.228 31.818 0.00 0.00 40.55 4.08


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.