Multiple sequence alignment - TraesCS3B01G200000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G200000 chr3B 100.000 2717 0 0 1 2717 228735283 228737999 0.000000e+00 5018.0
1 TraesCS3B01G200000 chr3B 80.769 208 24 9 34 227 661747138 661747343 6.060000e-32 148.0
2 TraesCS3B01G200000 chr3D 94.705 1171 43 8 786 1940 157474702 157475869 0.000000e+00 1801.0
3 TraesCS3B01G200000 chr3A 93.789 1111 48 12 786 1876 170742389 170741280 0.000000e+00 1650.0
4 TraesCS3B01G200000 chr3A 81.975 638 101 8 2082 2717 398888580 398887955 1.850000e-146 529.0
5 TraesCS3B01G200000 chr3A 88.430 121 13 1 1870 1989 170738170 170738050 7.840000e-31 145.0
6 TraesCS3B01G200000 chr3A 89.062 64 6 1 199 261 585549322 585549259 8.070000e-11 78.7
7 TraesCS3B01G200000 chr7D 83.483 557 86 4 2165 2717 162199970 162199416 5.190000e-142 514.0
8 TraesCS3B01G200000 chr7D 83.712 528 80 6 2188 2711 463955153 463954628 6.760000e-136 494.0
9 TraesCS3B01G200000 chr7D 79.283 251 30 14 4 238 542240795 542241039 3.620000e-34 156.0
10 TraesCS3B01G200000 chr2B 80.056 712 124 14 2013 2717 135694641 135695341 1.870000e-141 512.0
11 TraesCS3B01G200000 chr5B 80.112 714 119 19 2013 2712 146906739 146906035 6.710000e-141 510.0
12 TraesCS3B01G200000 chr5B 93.333 45 2 1 2013 2056 660203636 660203592 6.280000e-07 65.8
13 TraesCS3B01G200000 chr5B 100.000 30 0 0 230 259 699220367 699220396 3.780000e-04 56.5
14 TraesCS3B01G200000 chr5D 80.757 634 110 8 2087 2717 404473791 404474415 4.070000e-133 484.0
15 TraesCS3B01G200000 chr7A 81.387 591 96 9 2082 2669 481710466 481709887 1.140000e-128 470.0
16 TraesCS3B01G200000 chr7A 77.419 713 144 15 2013 2717 299596635 299595932 2.520000e-110 409.0
17 TraesCS3B01G200000 chr7A 80.153 131 21 5 2013 2140 589458442 589458570 2.880000e-15 93.5
18 TraesCS3B01G200000 chr1A 80.824 558 96 10 2165 2717 45789539 45788988 6.950000e-116 427.0
19 TraesCS3B01G200000 chr1D 79.592 245 33 10 4 236 422834443 422834682 2.800000e-35 159.0
20 TraesCS3B01G200000 chr2D 79.184 245 34 10 4 236 430001837 430002076 1.300000e-33 154.0
21 TraesCS3B01G200000 chr1B 81.592 201 23 10 34 223 287843686 287843883 1.300000e-33 154.0
22 TraesCS3B01G200000 chr1B 81.283 187 21 9 34 207 38012721 38012536 3.650000e-29 139.0
23 TraesCS3B01G200000 chr1B 80.214 187 23 9 34 207 1465787 1465602 7.900000e-26 128.0
24 TraesCS3B01G200000 chr7B 79.817 218 24 12 4 208 639276450 639276660 1.010000e-29 141.0
25 TraesCS3B01G200000 chr4D 83.529 85 12 2 2022 2105 98927185 98927268 8.070000e-11 78.7
26 TraesCS3B01G200000 chr2A 100.000 29 0 0 230 258 109604742 109604714 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G200000 chr3B 228735283 228737999 2716 False 5018.0 5018 100.0000 1 2717 1 chr3B.!!$F1 2716
1 TraesCS3B01G200000 chr3D 157474702 157475869 1167 False 1801.0 1801 94.7050 786 1940 1 chr3D.!!$F1 1154
2 TraesCS3B01G200000 chr3A 170738050 170742389 4339 True 897.5 1650 91.1095 786 1989 2 chr3A.!!$R3 1203
3 TraesCS3B01G200000 chr3A 398887955 398888580 625 True 529.0 529 81.9750 2082 2717 1 chr3A.!!$R1 635
4 TraesCS3B01G200000 chr7D 162199416 162199970 554 True 514.0 514 83.4830 2165 2717 1 chr7D.!!$R1 552
5 TraesCS3B01G200000 chr7D 463954628 463955153 525 True 494.0 494 83.7120 2188 2711 1 chr7D.!!$R2 523
6 TraesCS3B01G200000 chr2B 135694641 135695341 700 False 512.0 512 80.0560 2013 2717 1 chr2B.!!$F1 704
7 TraesCS3B01G200000 chr5B 146906035 146906739 704 True 510.0 510 80.1120 2013 2712 1 chr5B.!!$R1 699
8 TraesCS3B01G200000 chr5D 404473791 404474415 624 False 484.0 484 80.7570 2087 2717 1 chr5D.!!$F1 630
9 TraesCS3B01G200000 chr7A 481709887 481710466 579 True 470.0 470 81.3870 2082 2669 1 chr7A.!!$R2 587
10 TraesCS3B01G200000 chr7A 299595932 299596635 703 True 409.0 409 77.4190 2013 2717 1 chr7A.!!$R1 704
11 TraesCS3B01G200000 chr1A 45788988 45789539 551 True 427.0 427 80.8240 2165 2717 1 chr1A.!!$R1 552

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
332 333 0.034896 GTGTCGTTGGATGGAGTGGT 59.965 55.0 0.0 0.0 0.0 4.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2017 5154 0.250553 TTGAGGGTCGGCGTTGAAAT 60.251 50.0 6.85 0.0 0.0 2.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
82 83 9.762933 ATGCAAACACTTTTTAGAATTACACAT 57.237 25.926 0.00 0.00 0.00 3.21
83 84 9.029243 TGCAAACACTTTTTAGAATTACACATG 57.971 29.630 0.00 0.00 0.00 3.21
84 85 9.030301 GCAAACACTTTTTAGAATTACACATGT 57.970 29.630 0.00 0.00 0.00 3.21
143 144 8.558973 CCAAATTAATAGTTGGGCATTTTGAA 57.441 30.769 10.07 0.00 43.93 2.69
144 145 9.007901 CCAAATTAATAGTTGGGCATTTTGAAA 57.992 29.630 10.07 0.00 43.93 2.69
151 152 8.721019 ATAGTTGGGCATTTTGAAATTACATG 57.279 30.769 0.00 0.00 0.00 3.21
152 153 6.767456 AGTTGGGCATTTTGAAATTACATGA 58.233 32.000 0.00 0.00 0.00 3.07
153 154 6.875195 AGTTGGGCATTTTGAAATTACATGAG 59.125 34.615 0.00 0.00 0.00 2.90
154 155 5.177326 TGGGCATTTTGAAATTACATGAGC 58.823 37.500 0.00 0.00 0.00 4.26
155 156 5.046448 TGGGCATTTTGAAATTACATGAGCT 60.046 36.000 0.00 0.00 0.00 4.09
156 157 5.876460 GGGCATTTTGAAATTACATGAGCTT 59.124 36.000 0.00 0.00 0.00 3.74
157 158 6.036408 GGGCATTTTGAAATTACATGAGCTTC 59.964 38.462 0.00 0.00 0.00 3.86
158 159 6.815142 GGCATTTTGAAATTACATGAGCTTCT 59.185 34.615 0.00 0.00 0.00 2.85
159 160 7.332678 GGCATTTTGAAATTACATGAGCTTCTT 59.667 33.333 0.00 0.00 0.00 2.52
160 161 8.715088 GCATTTTGAAATTACATGAGCTTCTTT 58.285 29.630 0.00 0.00 0.00 2.52
165 166 9.897744 TTGAAATTACATGAGCTTCTTTTAGTG 57.102 29.630 0.00 0.00 0.00 2.74
166 167 9.066892 TGAAATTACATGAGCTTCTTTTAGTGT 57.933 29.630 0.00 0.00 0.00 3.55
176 177 9.216117 TGAGCTTCTTTTAGTGTAATTTACTCC 57.784 33.333 7.99 0.00 0.00 3.85
177 178 9.438228 GAGCTTCTTTTAGTGTAATTTACTCCT 57.562 33.333 7.99 6.40 0.00 3.69
255 256 6.859420 AAAACTAACATGTTGAAAATGGGC 57.141 33.333 21.42 0.00 0.00 5.36
256 257 4.535526 ACTAACATGTTGAAAATGGGCC 57.464 40.909 21.42 0.00 0.00 5.80
257 258 3.900601 ACTAACATGTTGAAAATGGGCCA 59.099 39.130 21.42 9.61 0.00 5.36
258 259 2.837532 ACATGTTGAAAATGGGCCAC 57.162 45.000 9.28 0.00 0.00 5.01
259 260 2.045524 ACATGTTGAAAATGGGCCACA 58.954 42.857 9.28 0.00 0.00 4.17
260 261 2.224257 ACATGTTGAAAATGGGCCACAC 60.224 45.455 9.28 0.75 0.00 3.82
261 262 0.755686 TGTTGAAAATGGGCCACACC 59.244 50.000 9.28 0.00 37.93 4.16
262 263 0.755686 GTTGAAAATGGGCCACACCA 59.244 50.000 9.28 1.42 46.24 4.17
263 264 1.047002 TTGAAAATGGGCCACACCAG 58.953 50.000 9.28 0.00 45.20 4.00
264 265 0.831288 TGAAAATGGGCCACACCAGG 60.831 55.000 9.28 0.00 45.20 4.45
275 276 4.988598 CACCAGGCGCGGTCTGTT 62.989 66.667 8.83 0.00 37.07 3.16
276 277 3.307906 ACCAGGCGCGGTCTGTTA 61.308 61.111 8.83 0.00 32.11 2.41
277 278 2.186903 CCAGGCGCGGTCTGTTAT 59.813 61.111 8.83 0.00 32.80 1.89
278 279 1.324740 ACCAGGCGCGGTCTGTTATA 61.325 55.000 8.83 0.00 32.11 0.98
279 280 0.597637 CCAGGCGCGGTCTGTTATAG 60.598 60.000 8.83 0.00 32.80 1.31
280 281 0.384309 CAGGCGCGGTCTGTTATAGA 59.616 55.000 8.83 0.00 29.72 1.98
306 307 9.561069 ACATAAAATACAGCAATCCTACTTAGG 57.439 33.333 0.00 0.00 45.02 2.69
307 308 6.944234 AAAATACAGCAATCCTACTTAGGC 57.056 37.500 0.00 0.00 43.31 3.93
308 309 5.630415 AATACAGCAATCCTACTTAGGCA 57.370 39.130 0.00 0.00 43.31 4.75
309 310 5.832539 ATACAGCAATCCTACTTAGGCAT 57.167 39.130 0.00 0.00 43.31 4.40
310 311 3.813443 ACAGCAATCCTACTTAGGCATG 58.187 45.455 0.00 0.00 43.31 4.06
311 312 3.455910 ACAGCAATCCTACTTAGGCATGA 59.544 43.478 0.00 0.00 43.31 3.07
312 313 4.080356 ACAGCAATCCTACTTAGGCATGAA 60.080 41.667 0.00 0.00 43.31 2.57
313 314 4.514441 CAGCAATCCTACTTAGGCATGAAG 59.486 45.833 0.00 0.00 43.31 3.02
314 315 4.164988 AGCAATCCTACTTAGGCATGAAGT 59.835 41.667 0.00 0.00 43.31 3.01
315 316 4.274459 GCAATCCTACTTAGGCATGAAGTG 59.726 45.833 8.20 0.00 43.31 3.16
316 317 5.431765 CAATCCTACTTAGGCATGAAGTGT 58.568 41.667 8.20 0.00 43.31 3.55
317 318 4.737855 TCCTACTTAGGCATGAAGTGTC 57.262 45.455 8.20 0.00 43.31 3.67
318 319 3.130516 TCCTACTTAGGCATGAAGTGTCG 59.869 47.826 8.20 0.00 43.31 4.35
319 320 3.119101 CCTACTTAGGCATGAAGTGTCGT 60.119 47.826 8.20 0.00 37.68 4.34
320 321 3.402628 ACTTAGGCATGAAGTGTCGTT 57.597 42.857 0.00 0.00 37.56 3.85
321 322 3.067106 ACTTAGGCATGAAGTGTCGTTG 58.933 45.455 0.00 0.00 37.56 4.10
322 323 2.093306 TAGGCATGAAGTGTCGTTGG 57.907 50.000 0.00 0.00 37.56 3.77
323 324 0.396435 AGGCATGAAGTGTCGTTGGA 59.604 50.000 0.00 0.00 37.56 3.53
324 325 1.003580 AGGCATGAAGTGTCGTTGGAT 59.996 47.619 0.00 0.00 37.56 3.41
325 326 1.131126 GGCATGAAGTGTCGTTGGATG 59.869 52.381 0.00 0.00 0.00 3.51
326 327 1.131126 GCATGAAGTGTCGTTGGATGG 59.869 52.381 0.00 0.00 0.00 3.51
327 328 2.698803 CATGAAGTGTCGTTGGATGGA 58.301 47.619 0.00 0.00 0.00 3.41
328 329 2.455674 TGAAGTGTCGTTGGATGGAG 57.544 50.000 0.00 0.00 0.00 3.86
329 330 1.691976 TGAAGTGTCGTTGGATGGAGT 59.308 47.619 0.00 0.00 0.00 3.85
330 331 2.069273 GAAGTGTCGTTGGATGGAGTG 58.931 52.381 0.00 0.00 0.00 3.51
331 332 0.321671 AGTGTCGTTGGATGGAGTGG 59.678 55.000 0.00 0.00 0.00 4.00
332 333 0.034896 GTGTCGTTGGATGGAGTGGT 59.965 55.000 0.00 0.00 0.00 4.16
333 334 1.274167 GTGTCGTTGGATGGAGTGGTA 59.726 52.381 0.00 0.00 0.00 3.25
334 335 1.548719 TGTCGTTGGATGGAGTGGTAG 59.451 52.381 0.00 0.00 0.00 3.18
335 336 1.134788 GTCGTTGGATGGAGTGGTAGG 60.135 57.143 0.00 0.00 0.00 3.18
336 337 1.191535 CGTTGGATGGAGTGGTAGGA 58.808 55.000 0.00 0.00 0.00 2.94
337 338 1.553248 CGTTGGATGGAGTGGTAGGAA 59.447 52.381 0.00 0.00 0.00 3.36
338 339 2.677037 CGTTGGATGGAGTGGTAGGAAC 60.677 54.545 0.00 0.00 0.00 3.62
339 340 1.191535 TGGATGGAGTGGTAGGAACG 58.808 55.000 0.00 0.00 0.00 3.95
340 341 0.464452 GGATGGAGTGGTAGGAACGG 59.536 60.000 0.00 0.00 0.00 4.44
341 342 0.464452 GATGGAGTGGTAGGAACGGG 59.536 60.000 0.00 0.00 0.00 5.28
342 343 0.042131 ATGGAGTGGTAGGAACGGGA 59.958 55.000 0.00 0.00 0.00 5.14
343 344 0.901580 TGGAGTGGTAGGAACGGGAC 60.902 60.000 0.00 0.00 0.00 4.46
344 345 0.901580 GGAGTGGTAGGAACGGGACA 60.902 60.000 0.00 0.00 0.00 4.02
345 346 1.192428 GAGTGGTAGGAACGGGACAT 58.808 55.000 0.00 0.00 0.00 3.06
346 347 1.136500 GAGTGGTAGGAACGGGACATC 59.864 57.143 0.00 0.00 0.00 3.06
347 348 0.899720 GTGGTAGGAACGGGACATCA 59.100 55.000 0.00 0.00 0.00 3.07
348 349 1.276989 GTGGTAGGAACGGGACATCAA 59.723 52.381 0.00 0.00 0.00 2.57
349 350 1.979308 TGGTAGGAACGGGACATCAAA 59.021 47.619 0.00 0.00 0.00 2.69
350 351 2.574369 TGGTAGGAACGGGACATCAAAT 59.426 45.455 0.00 0.00 0.00 2.32
351 352 2.943033 GGTAGGAACGGGACATCAAATG 59.057 50.000 0.00 0.00 0.00 2.32
352 353 2.128771 AGGAACGGGACATCAAATGG 57.871 50.000 0.00 0.00 33.60 3.16
353 354 1.354368 AGGAACGGGACATCAAATGGT 59.646 47.619 0.00 0.00 33.60 3.55
354 355 2.574369 AGGAACGGGACATCAAATGGTA 59.426 45.455 0.00 0.00 33.60 3.25
355 356 3.202151 AGGAACGGGACATCAAATGGTAT 59.798 43.478 0.00 0.00 33.60 2.73
356 357 3.564225 GGAACGGGACATCAAATGGTATC 59.436 47.826 0.00 0.00 33.60 2.24
357 358 2.833794 ACGGGACATCAAATGGTATCG 58.166 47.619 0.00 0.00 33.60 2.92
358 359 1.531149 CGGGACATCAAATGGTATCGC 59.469 52.381 0.00 0.00 33.60 4.58
359 360 2.571212 GGGACATCAAATGGTATCGCA 58.429 47.619 0.00 0.00 33.60 5.10
360 361 2.549754 GGGACATCAAATGGTATCGCAG 59.450 50.000 0.00 0.00 33.60 5.18
361 362 2.549754 GGACATCAAATGGTATCGCAGG 59.450 50.000 0.00 0.00 33.60 4.85
362 363 2.549754 GACATCAAATGGTATCGCAGGG 59.450 50.000 0.00 0.00 33.60 4.45
363 364 1.267806 CATCAAATGGTATCGCAGGGC 59.732 52.381 0.00 0.00 0.00 5.19
364 365 0.254462 TCAAATGGTATCGCAGGGCA 59.746 50.000 0.00 0.00 0.00 5.36
365 366 0.664761 CAAATGGTATCGCAGGGCAG 59.335 55.000 0.00 0.00 0.00 4.85
366 367 0.546122 AAATGGTATCGCAGGGCAGA 59.454 50.000 0.00 0.00 0.00 4.26
367 368 0.767375 AATGGTATCGCAGGGCAGAT 59.233 50.000 0.00 0.00 0.00 2.90
368 369 0.767375 ATGGTATCGCAGGGCAGATT 59.233 50.000 0.00 0.00 0.00 2.40
369 370 1.419381 TGGTATCGCAGGGCAGATTA 58.581 50.000 0.00 0.00 0.00 1.75
370 371 1.977854 TGGTATCGCAGGGCAGATTAT 59.022 47.619 0.00 0.00 0.00 1.28
371 372 2.371841 TGGTATCGCAGGGCAGATTATT 59.628 45.455 0.00 0.00 0.00 1.40
372 373 2.744202 GGTATCGCAGGGCAGATTATTG 59.256 50.000 0.00 0.00 0.00 1.90
373 374 1.242076 ATCGCAGGGCAGATTATTGC 58.758 50.000 0.00 0.00 43.34 3.56
374 375 0.107263 TCGCAGGGCAGATTATTGCA 60.107 50.000 0.11 0.00 45.86 4.08
375 376 0.956633 CGCAGGGCAGATTATTGCAT 59.043 50.000 0.00 0.00 45.86 3.96
376 377 2.153645 CGCAGGGCAGATTATTGCATA 58.846 47.619 0.00 0.00 45.86 3.14
377 378 2.751259 CGCAGGGCAGATTATTGCATAT 59.249 45.455 0.00 0.00 45.86 1.78
378 379 3.181503 CGCAGGGCAGATTATTGCATATC 60.182 47.826 0.00 0.00 45.86 1.63
379 380 3.760151 GCAGGGCAGATTATTGCATATCA 59.240 43.478 0.00 0.00 45.86 2.15
380 381 4.401519 GCAGGGCAGATTATTGCATATCAT 59.598 41.667 0.00 0.00 45.86 2.45
381 382 5.678871 GCAGGGCAGATTATTGCATATCATG 60.679 44.000 0.00 0.00 45.86 3.07
382 383 5.417894 CAGGGCAGATTATTGCATATCATGT 59.582 40.000 0.00 0.00 45.86 3.21
383 384 6.014647 AGGGCAGATTATTGCATATCATGTT 58.985 36.000 0.00 0.00 45.86 2.71
384 385 6.495872 AGGGCAGATTATTGCATATCATGTTT 59.504 34.615 0.00 0.00 45.86 2.83
385 386 6.588756 GGGCAGATTATTGCATATCATGTTTG 59.411 38.462 0.00 0.00 45.86 2.93
386 387 7.372714 GGCAGATTATTGCATATCATGTTTGA 58.627 34.615 0.00 0.00 45.86 2.69
387 388 7.541091 GGCAGATTATTGCATATCATGTTTGAG 59.459 37.037 0.00 0.00 45.86 3.02
388 389 7.541091 GCAGATTATTGCATATCATGTTTGAGG 59.459 37.037 0.00 0.00 43.53 3.86
389 390 8.789762 CAGATTATTGCATATCATGTTTGAGGA 58.210 33.333 0.00 0.00 34.73 3.71
390 391 9.011095 AGATTATTGCATATCATGTTTGAGGAG 57.989 33.333 0.00 0.00 34.73 3.69
391 392 4.906065 TTGCATATCATGTTTGAGGAGC 57.094 40.909 0.00 0.00 34.73 4.70
392 393 3.888583 TGCATATCATGTTTGAGGAGCA 58.111 40.909 0.00 0.00 34.73 4.26
393 394 4.466827 TGCATATCATGTTTGAGGAGCAT 58.533 39.130 0.00 0.00 34.73 3.79
394 395 4.891168 TGCATATCATGTTTGAGGAGCATT 59.109 37.500 0.00 0.00 34.73 3.56
395 396 5.361571 TGCATATCATGTTTGAGGAGCATTT 59.638 36.000 0.00 0.00 34.73 2.32
396 397 6.127281 TGCATATCATGTTTGAGGAGCATTTT 60.127 34.615 0.00 0.00 34.73 1.82
397 398 7.068470 TGCATATCATGTTTGAGGAGCATTTTA 59.932 33.333 0.00 0.00 34.73 1.52
398 399 7.594015 GCATATCATGTTTGAGGAGCATTTTAG 59.406 37.037 0.00 0.00 34.73 1.85
399 400 8.627403 CATATCATGTTTGAGGAGCATTTTAGT 58.373 33.333 0.00 0.00 34.73 2.24
400 401 6.500684 TCATGTTTGAGGAGCATTTTAGTC 57.499 37.500 0.00 0.00 0.00 2.59
401 402 6.240894 TCATGTTTGAGGAGCATTTTAGTCT 58.759 36.000 0.00 0.00 0.00 3.24
402 403 7.394016 TCATGTTTGAGGAGCATTTTAGTCTA 58.606 34.615 0.00 0.00 0.00 2.59
403 404 7.882791 TCATGTTTGAGGAGCATTTTAGTCTAA 59.117 33.333 0.00 0.00 0.00 2.10
404 405 8.680903 CATGTTTGAGGAGCATTTTAGTCTAAT 58.319 33.333 0.00 0.00 0.00 1.73
405 406 9.905713 ATGTTTGAGGAGCATTTTAGTCTAATA 57.094 29.630 0.00 0.00 0.00 0.98
406 407 9.733556 TGTTTGAGGAGCATTTTAGTCTAATAA 57.266 29.630 0.00 0.00 0.00 1.40
416 417 9.670719 GCATTTTAGTCTAATAATCAAGAAGGC 57.329 33.333 0.00 0.00 0.00 4.35
421 422 7.326968 AGTCTAATAATCAAGAAGGCAAAGC 57.673 36.000 0.00 0.00 0.00 3.51
433 434 1.743996 GGCAAAGCCTAGTCTCAAGG 58.256 55.000 0.00 0.00 46.69 3.61
434 435 1.279271 GGCAAAGCCTAGTCTCAAGGA 59.721 52.381 0.00 0.00 46.69 3.36
435 436 2.290323 GGCAAAGCCTAGTCTCAAGGAA 60.290 50.000 0.00 0.00 46.69 3.36
436 437 3.006247 GCAAAGCCTAGTCTCAAGGAAG 58.994 50.000 0.00 0.00 36.08 3.46
437 438 3.604582 CAAAGCCTAGTCTCAAGGAAGG 58.395 50.000 0.00 0.00 36.08 3.46
438 439 2.930109 AGCCTAGTCTCAAGGAAGGA 57.070 50.000 0.00 0.00 36.08 3.36
439 440 3.191888 AGCCTAGTCTCAAGGAAGGAA 57.808 47.619 0.00 0.00 36.08 3.36
440 441 3.730269 AGCCTAGTCTCAAGGAAGGAAT 58.270 45.455 0.00 0.00 36.08 3.01
441 442 3.454082 AGCCTAGTCTCAAGGAAGGAATG 59.546 47.826 0.00 0.00 36.08 2.67
442 443 3.802866 CCTAGTCTCAAGGAAGGAATGC 58.197 50.000 0.00 0.00 36.08 3.56
443 444 3.198635 CCTAGTCTCAAGGAAGGAATGCA 59.801 47.826 0.00 0.00 36.08 3.96
444 445 3.795688 AGTCTCAAGGAAGGAATGCAA 57.204 42.857 0.00 0.00 0.00 4.08
445 446 4.313020 AGTCTCAAGGAAGGAATGCAAT 57.687 40.909 0.00 0.00 0.00 3.56
446 447 4.670765 AGTCTCAAGGAAGGAATGCAATT 58.329 39.130 0.00 0.00 40.93 2.32
447 448 8.807481 CCTAGTCTCAAGGAAGGAATGCAATTC 61.807 44.444 0.00 0.00 43.64 2.17
472 473 9.394767 TCTGCTTAGATTATTTGTAAATGCTCA 57.605 29.630 0.27 0.00 0.00 4.26
474 475 9.955208 TGCTTAGATTATTTGTAAATGCTCATG 57.045 29.630 0.27 0.00 0.00 3.07
475 476 9.956720 GCTTAGATTATTTGTAAATGCTCATGT 57.043 29.630 0.27 0.00 0.00 3.21
480 481 9.846248 GATTATTTGTAAATGCTCATGTATCCC 57.154 33.333 0.27 0.00 0.00 3.85
481 482 6.655078 ATTTGTAAATGCTCATGTATCCCC 57.345 37.500 0.00 0.00 0.00 4.81
482 483 4.098914 TGTAAATGCTCATGTATCCCCC 57.901 45.455 0.00 0.00 0.00 5.40
483 484 3.461458 TGTAAATGCTCATGTATCCCCCA 59.539 43.478 0.00 0.00 0.00 4.96
484 485 3.686227 AAATGCTCATGTATCCCCCAA 57.314 42.857 0.00 0.00 0.00 4.12
485 486 2.664402 ATGCTCATGTATCCCCCAAC 57.336 50.000 0.00 0.00 0.00 3.77
486 487 1.294041 TGCTCATGTATCCCCCAACA 58.706 50.000 0.00 0.00 0.00 3.33
487 488 1.852309 TGCTCATGTATCCCCCAACAT 59.148 47.619 0.00 0.00 36.78 2.71
494 495 4.431416 TGTATCCCCCAACATGATGTAC 57.569 45.455 0.00 0.00 0.00 2.90
495 496 3.783082 TGTATCCCCCAACATGATGTACA 59.217 43.478 0.00 0.00 0.00 2.90
496 497 4.415179 TGTATCCCCCAACATGATGTACAT 59.585 41.667 8.43 8.43 40.17 2.29
497 498 3.576078 TCCCCCAACATGATGTACATC 57.424 47.619 25.95 25.95 37.07 3.06
498 499 2.174639 TCCCCCAACATGATGTACATCC 59.825 50.000 28.64 14.09 37.07 3.51
499 500 2.091939 CCCCCAACATGATGTACATCCA 60.092 50.000 28.64 18.55 37.07 3.41
500 501 3.436906 CCCCCAACATGATGTACATCCAT 60.437 47.826 28.64 19.73 37.07 3.41
501 502 3.570975 CCCCAACATGATGTACATCCATG 59.429 47.826 28.64 28.33 37.07 3.66
502 503 4.209538 CCCAACATGATGTACATCCATGT 58.790 43.478 28.95 28.95 44.48 3.21
503 504 4.037089 CCCAACATGATGTACATCCATGTG 59.963 45.833 31.83 26.76 41.89 3.21
504 505 4.641541 CCAACATGATGTACATCCATGTGT 59.358 41.667 31.83 25.95 41.89 3.72
505 506 5.821995 CCAACATGATGTACATCCATGTGTA 59.178 40.000 31.83 17.86 41.89 2.90
506 507 6.487668 CCAACATGATGTACATCCATGTGTAT 59.512 38.462 31.83 22.60 41.89 2.29
507 508 7.661027 CCAACATGATGTACATCCATGTGTATA 59.339 37.037 31.83 16.81 41.89 1.47
508 509 9.223099 CAACATGATGTACATCCATGTGTATAT 57.777 33.333 31.83 22.16 41.89 0.86
516 517 9.719355 TGTACATCCATGTGTATATATTTCACC 57.281 33.333 14.09 2.91 41.89 4.02
517 518 9.162764 GTACATCCATGTGTATATATTTCACCC 57.837 37.037 14.09 0.00 41.89 4.61
518 519 7.754624 ACATCCATGTGTATATATTTCACCCA 58.245 34.615 14.09 0.00 40.03 4.51
519 520 8.393259 ACATCCATGTGTATATATTTCACCCAT 58.607 33.333 14.09 0.00 40.03 4.00
520 521 9.246670 CATCCATGTGTATATATTTCACCCATT 57.753 33.333 14.09 0.83 0.00 3.16
521 522 9.827198 ATCCATGTGTATATATTTCACCCATTT 57.173 29.630 14.09 0.83 0.00 2.32
522 523 9.653516 TCCATGTGTATATATTTCACCCATTTT 57.346 29.630 14.09 0.00 0.00 1.82
536 537 9.898152 TTTCACCCATTTTAATGAAAAAGAGTT 57.102 25.926 4.07 0.00 40.32 3.01
538 539 9.974980 TCACCCATTTTAATGAAAAAGAGTTAC 57.025 29.630 4.07 0.00 40.32 2.50
539 540 9.757227 CACCCATTTTAATGAAAAAGAGTTACA 57.243 29.630 4.07 0.00 40.32 2.41
540 541 9.758651 ACCCATTTTAATGAAAAAGAGTTACAC 57.241 29.630 4.07 0.00 40.32 2.90
541 542 9.981114 CCCATTTTAATGAAAAAGAGTTACACT 57.019 29.630 4.07 0.00 40.32 3.55
549 550 9.588096 AATGAAAAAGAGTTACACTAGGGATTT 57.412 29.630 0.00 0.00 0.00 2.17
550 551 8.990163 TGAAAAAGAGTTACACTAGGGATTTT 57.010 30.769 0.00 0.00 0.00 1.82
551 552 9.063615 TGAAAAAGAGTTACACTAGGGATTTTC 57.936 33.333 0.00 8.58 35.01 2.29
552 553 7.997773 AAAAGAGTTACACTAGGGATTTTCC 57.002 36.000 0.00 0.00 35.23 3.13
566 567 3.985279 GGATTTTCCCGTACTGTTTTTGC 59.015 43.478 0.00 0.00 0.00 3.68
567 568 4.261867 GGATTTTCCCGTACTGTTTTTGCT 60.262 41.667 0.00 0.00 0.00 3.91
568 569 5.048573 GGATTTTCCCGTACTGTTTTTGCTA 60.049 40.000 0.00 0.00 0.00 3.49
569 570 6.349860 GGATTTTCCCGTACTGTTTTTGCTAT 60.350 38.462 0.00 0.00 0.00 2.97
570 571 7.148205 GGATTTTCCCGTACTGTTTTTGCTATA 60.148 37.037 0.00 0.00 0.00 1.31
571 572 7.507733 TTTTCCCGTACTGTTTTTGCTATAA 57.492 32.000 0.00 0.00 0.00 0.98
572 573 7.507733 TTTCCCGTACTGTTTTTGCTATAAA 57.492 32.000 0.00 0.00 0.00 1.40
573 574 7.507733 TTCCCGTACTGTTTTTGCTATAAAA 57.492 32.000 0.00 0.00 0.00 1.52
574 575 7.507733 TCCCGTACTGTTTTTGCTATAAAAA 57.492 32.000 0.00 0.00 0.00 1.94
593 594 3.801307 AAAAAGGTATCACGGGAAGGT 57.199 42.857 0.00 0.00 0.00 3.50
594 595 4.914177 AAAAAGGTATCACGGGAAGGTA 57.086 40.909 0.00 0.00 0.00 3.08
595 596 4.482952 AAAAGGTATCACGGGAAGGTAG 57.517 45.455 0.00 0.00 0.00 3.18
596 597 1.411041 AGGTATCACGGGAAGGTAGC 58.589 55.000 0.00 0.00 0.00 3.58
597 598 1.063114 AGGTATCACGGGAAGGTAGCT 60.063 52.381 0.00 0.00 0.00 3.32
598 599 2.176364 AGGTATCACGGGAAGGTAGCTA 59.824 50.000 0.00 0.00 0.00 3.32
599 600 2.557490 GGTATCACGGGAAGGTAGCTAG 59.443 54.545 0.00 0.00 0.00 3.42
600 601 2.456073 ATCACGGGAAGGTAGCTAGT 57.544 50.000 0.00 0.00 0.00 2.57
601 602 1.471119 TCACGGGAAGGTAGCTAGTG 58.529 55.000 0.00 4.32 0.00 2.74
602 603 0.179108 CACGGGAAGGTAGCTAGTGC 60.179 60.000 0.00 0.00 40.05 4.40
603 604 1.328430 ACGGGAAGGTAGCTAGTGCC 61.328 60.000 0.00 0.00 40.80 5.01
604 605 1.442148 GGGAAGGTAGCTAGTGCCG 59.558 63.158 0.00 0.00 40.80 5.69
605 606 1.442148 GGAAGGTAGCTAGTGCCGG 59.558 63.158 0.00 0.00 40.80 6.13
606 607 1.227292 GAAGGTAGCTAGTGCCGGC 60.227 63.158 22.73 22.73 40.80 6.13
607 608 1.956629 GAAGGTAGCTAGTGCCGGCA 61.957 60.000 29.03 29.03 40.80 5.69
608 609 1.961180 AAGGTAGCTAGTGCCGGCAG 61.961 60.000 33.73 20.49 40.80 4.85
609 610 2.107141 GTAGCTAGTGCCGGCAGG 59.893 66.667 33.73 23.37 40.80 4.85
610 611 2.363795 TAGCTAGTGCCGGCAGGT 60.364 61.111 33.73 25.94 40.80 4.00
611 612 2.721167 TAGCTAGTGCCGGCAGGTG 61.721 63.158 33.73 22.74 40.80 4.00
613 614 4.473520 CTAGTGCCGGCAGGTGGG 62.474 72.222 33.73 14.70 40.50 4.61
620 621 4.489771 CGGCAGGTGGGACCCATC 62.490 72.222 18.51 17.67 39.75 3.51
621 622 4.129148 GGCAGGTGGGACCCATCC 62.129 72.222 20.95 19.97 45.42 3.51
629 630 2.203209 GGACCCATCCGATGCCAC 60.203 66.667 2.53 0.00 34.48 5.01
630 631 2.589540 GACCCATCCGATGCCACA 59.410 61.111 2.53 0.00 0.00 4.17
631 632 1.819632 GACCCATCCGATGCCACAC 60.820 63.158 2.53 0.00 0.00 3.82
632 633 2.896854 CCCATCCGATGCCACACG 60.897 66.667 2.53 0.00 0.00 4.49
633 634 2.125147 CCATCCGATGCCACACGT 60.125 61.111 2.53 0.00 0.00 4.49
634 635 2.463620 CCATCCGATGCCACACGTG 61.464 63.158 15.48 15.48 0.00 4.49
635 636 2.819595 ATCCGATGCCACACGTGC 60.820 61.111 17.22 1.66 0.00 5.34
636 637 3.315142 ATCCGATGCCACACGTGCT 62.315 57.895 17.22 0.00 0.00 4.40
637 638 1.955495 ATCCGATGCCACACGTGCTA 61.955 55.000 17.22 0.00 0.00 3.49
638 639 1.521457 CCGATGCCACACGTGCTAT 60.521 57.895 17.22 4.75 0.00 2.97
639 640 1.089481 CCGATGCCACACGTGCTATT 61.089 55.000 17.22 0.00 0.00 1.73
640 641 1.566404 CGATGCCACACGTGCTATTA 58.434 50.000 17.22 0.00 0.00 0.98
641 642 1.257936 CGATGCCACACGTGCTATTAC 59.742 52.381 17.22 2.91 0.00 1.89
642 643 2.550978 GATGCCACACGTGCTATTACT 58.449 47.619 17.22 0.00 0.00 2.24
643 644 1.720805 TGCCACACGTGCTATTACTG 58.279 50.000 17.22 4.12 0.00 2.74
644 645 1.001520 TGCCACACGTGCTATTACTGT 59.998 47.619 17.22 0.00 0.00 3.55
645 646 2.073816 GCCACACGTGCTATTACTGTT 58.926 47.619 17.22 0.00 0.00 3.16
646 647 2.482721 GCCACACGTGCTATTACTGTTT 59.517 45.455 17.22 0.00 0.00 2.83
647 648 3.680937 GCCACACGTGCTATTACTGTTTA 59.319 43.478 17.22 0.00 0.00 2.01
648 649 4.435121 GCCACACGTGCTATTACTGTTTAC 60.435 45.833 17.22 0.00 0.00 2.01
649 650 4.927425 CCACACGTGCTATTACTGTTTACT 59.073 41.667 17.22 0.00 0.00 2.24
650 651 5.407387 CCACACGTGCTATTACTGTTTACTT 59.593 40.000 17.22 0.00 0.00 2.24
651 652 6.296605 CACACGTGCTATTACTGTTTACTTG 58.703 40.000 17.22 0.00 0.00 3.16
652 653 5.987347 ACACGTGCTATTACTGTTTACTTGT 59.013 36.000 17.22 0.00 0.00 3.16
653 654 6.145048 ACACGTGCTATTACTGTTTACTTGTC 59.855 38.462 17.22 0.00 0.00 3.18
654 655 6.144886 CACGTGCTATTACTGTTTACTTGTCA 59.855 38.462 0.82 0.00 0.00 3.58
655 656 6.365247 ACGTGCTATTACTGTTTACTTGTCAG 59.635 38.462 0.00 0.00 35.60 3.51
656 657 6.183360 CGTGCTATTACTGTTTACTTGTCAGG 60.183 42.308 0.00 0.00 34.02 3.86
657 658 6.092259 GTGCTATTACTGTTTACTTGTCAGGG 59.908 42.308 0.00 0.00 34.02 4.45
658 659 5.585047 GCTATTACTGTTTACTTGTCAGGGG 59.415 44.000 0.00 0.00 34.02 4.79
659 660 5.578157 ATTACTGTTTACTTGTCAGGGGT 57.422 39.130 0.00 0.00 34.02 4.95
660 661 3.945640 ACTGTTTACTTGTCAGGGGTT 57.054 42.857 0.00 0.00 34.02 4.11
661 662 4.245251 ACTGTTTACTTGTCAGGGGTTT 57.755 40.909 0.00 0.00 34.02 3.27
662 663 4.606210 ACTGTTTACTTGTCAGGGGTTTT 58.394 39.130 0.00 0.00 34.02 2.43
663 664 5.020795 ACTGTTTACTTGTCAGGGGTTTTT 58.979 37.500 0.00 0.00 34.02 1.94
664 665 5.126545 ACTGTTTACTTGTCAGGGGTTTTTC 59.873 40.000 0.00 0.00 34.02 2.29
665 666 4.096682 TGTTTACTTGTCAGGGGTTTTTCG 59.903 41.667 0.00 0.00 0.00 3.46
666 667 2.430248 ACTTGTCAGGGGTTTTTCGT 57.570 45.000 0.00 0.00 0.00 3.85
667 668 3.564053 ACTTGTCAGGGGTTTTTCGTA 57.436 42.857 0.00 0.00 0.00 3.43
668 669 3.888583 ACTTGTCAGGGGTTTTTCGTAA 58.111 40.909 0.00 0.00 0.00 3.18
669 670 3.881089 ACTTGTCAGGGGTTTTTCGTAAG 59.119 43.478 0.00 0.00 0.00 2.34
687 688 5.992729 CGTAAGAAAAATGGAAAACGGAGA 58.007 37.500 0.00 0.00 43.02 3.71
688 689 6.077838 CGTAAGAAAAATGGAAAACGGAGAG 58.922 40.000 0.00 0.00 43.02 3.20
689 690 6.073440 CGTAAGAAAAATGGAAAACGGAGAGA 60.073 38.462 0.00 0.00 43.02 3.10
690 691 6.901081 AAGAAAAATGGAAAACGGAGAGAT 57.099 33.333 0.00 0.00 0.00 2.75
691 692 6.259550 AGAAAAATGGAAAACGGAGAGATG 57.740 37.500 0.00 0.00 0.00 2.90
692 693 5.183904 AGAAAAATGGAAAACGGAGAGATGG 59.816 40.000 0.00 0.00 0.00 3.51
693 694 2.717639 ATGGAAAACGGAGAGATGGG 57.282 50.000 0.00 0.00 0.00 4.00
694 695 0.618458 TGGAAAACGGAGAGATGGGG 59.382 55.000 0.00 0.00 0.00 4.96
695 696 0.107165 GGAAAACGGAGAGATGGGGG 60.107 60.000 0.00 0.00 0.00 5.40
696 697 0.618981 GAAAACGGAGAGATGGGGGT 59.381 55.000 0.00 0.00 0.00 4.95
697 698 1.004394 GAAAACGGAGAGATGGGGGTT 59.996 52.381 0.00 0.00 0.00 4.11
698 699 0.328258 AAACGGAGAGATGGGGGTTG 59.672 55.000 0.00 0.00 0.00 3.77
699 700 2.190578 CGGAGAGATGGGGGTTGC 59.809 66.667 0.00 0.00 0.00 4.17
700 701 2.669133 CGGAGAGATGGGGGTTGCA 61.669 63.158 0.00 0.00 0.00 4.08
701 702 1.691219 GGAGAGATGGGGGTTGCAA 59.309 57.895 0.00 0.00 0.00 4.08
702 703 0.039618 GGAGAGATGGGGGTTGCAAA 59.960 55.000 0.00 0.00 0.00 3.68
703 704 1.549950 GGAGAGATGGGGGTTGCAAAA 60.550 52.381 0.00 0.00 0.00 2.44
704 705 2.247358 GAGAGATGGGGGTTGCAAAAA 58.753 47.619 0.00 0.00 0.00 1.94
725 726 4.388577 AAAAAGGCCACACTCCTATCTT 57.611 40.909 5.01 0.00 32.65 2.40
726 727 3.636153 AAAGGCCACACTCCTATCTTC 57.364 47.619 5.01 0.00 32.65 2.87
727 728 2.254152 AGGCCACACTCCTATCTTCA 57.746 50.000 5.01 0.00 30.79 3.02
728 729 2.769209 AGGCCACACTCCTATCTTCAT 58.231 47.619 5.01 0.00 30.79 2.57
729 730 2.703007 AGGCCACACTCCTATCTTCATC 59.297 50.000 5.01 0.00 30.79 2.92
730 731 2.546795 GGCCACACTCCTATCTTCATCG 60.547 54.545 0.00 0.00 0.00 3.84
731 732 2.748605 CCACACTCCTATCTTCATCGC 58.251 52.381 0.00 0.00 0.00 4.58
732 733 2.546795 CCACACTCCTATCTTCATCGCC 60.547 54.545 0.00 0.00 0.00 5.54
733 734 1.689273 ACACTCCTATCTTCATCGCCC 59.311 52.381 0.00 0.00 0.00 6.13
734 735 0.962489 ACTCCTATCTTCATCGCCCG 59.038 55.000 0.00 0.00 0.00 6.13
735 736 1.248486 CTCCTATCTTCATCGCCCGA 58.752 55.000 0.00 0.00 0.00 5.14
736 737 1.821753 CTCCTATCTTCATCGCCCGAT 59.178 52.381 0.00 0.00 34.81 4.18
737 738 1.819288 TCCTATCTTCATCGCCCGATC 59.181 52.381 0.00 0.00 31.62 3.69
738 739 1.546029 CCTATCTTCATCGCCCGATCA 59.454 52.381 0.00 0.00 31.62 2.92
739 740 2.600731 CTATCTTCATCGCCCGATCAC 58.399 52.381 0.00 0.00 31.62 3.06
740 741 1.043816 ATCTTCATCGCCCGATCACT 58.956 50.000 0.00 0.00 31.62 3.41
741 742 0.103026 TCTTCATCGCCCGATCACTG 59.897 55.000 0.00 0.00 31.62 3.66
742 743 0.103026 CTTCATCGCCCGATCACTGA 59.897 55.000 0.00 0.00 31.62 3.41
743 744 0.179111 TTCATCGCCCGATCACTGAC 60.179 55.000 0.00 0.00 31.62 3.51
744 745 1.141665 CATCGCCCGATCACTGACA 59.858 57.895 0.00 0.00 31.62 3.58
745 746 1.141881 ATCGCCCGATCACTGACAC 59.858 57.895 0.00 0.00 0.00 3.67
746 747 1.323271 ATCGCCCGATCACTGACACT 61.323 55.000 0.00 0.00 0.00 3.55
747 748 1.807165 CGCCCGATCACTGACACTG 60.807 63.158 0.00 0.00 0.00 3.66
748 749 1.591703 GCCCGATCACTGACACTGA 59.408 57.895 0.00 0.00 0.00 3.41
749 750 0.176680 GCCCGATCACTGACACTGAT 59.823 55.000 0.00 0.00 0.00 2.90
750 751 1.409064 GCCCGATCACTGACACTGATA 59.591 52.381 0.00 0.00 0.00 2.15
751 752 2.544694 GCCCGATCACTGACACTGATAG 60.545 54.545 0.00 0.00 0.00 2.08
752 753 2.544694 CCCGATCACTGACACTGATAGC 60.545 54.545 0.00 0.00 0.00 2.97
753 754 2.379732 CGATCACTGACACTGATAGCG 58.620 52.381 0.00 0.00 0.00 4.26
754 755 2.032178 CGATCACTGACACTGATAGCGA 59.968 50.000 0.00 0.00 0.00 4.93
755 756 3.626977 GATCACTGACACTGATAGCGAG 58.373 50.000 0.00 0.00 0.00 5.03
756 757 1.745653 TCACTGACACTGATAGCGAGG 59.254 52.381 0.00 0.00 0.00 4.63
757 758 0.457851 ACTGACACTGATAGCGAGGC 59.542 55.000 0.00 0.00 0.00 4.70
758 759 0.457443 CTGACACTGATAGCGAGGCA 59.543 55.000 0.00 0.00 0.00 4.75
759 760 0.173481 TGACACTGATAGCGAGGCAC 59.827 55.000 0.00 0.00 0.00 5.01
760 761 0.173481 GACACTGATAGCGAGGCACA 59.827 55.000 0.00 0.00 0.00 4.57
761 762 0.108615 ACACTGATAGCGAGGCACAC 60.109 55.000 0.00 0.00 0.00 3.82
763 764 1.139734 CTGATAGCGAGGCACACGT 59.860 57.895 0.00 0.00 45.83 4.49
764 765 0.867753 CTGATAGCGAGGCACACGTC 60.868 60.000 0.00 0.00 45.83 4.34
765 766 1.138883 GATAGCGAGGCACACGTCA 59.861 57.895 0.00 0.00 45.83 4.35
766 767 1.140407 GATAGCGAGGCACACGTCAC 61.140 60.000 0.00 0.00 45.83 3.67
767 768 2.867333 ATAGCGAGGCACACGTCACG 62.867 60.000 0.00 0.00 45.83 4.35
770 771 3.406361 GAGGCACACGTCACGCTG 61.406 66.667 0.00 0.00 0.00 5.18
771 772 4.969196 AGGCACACGTCACGCTGG 62.969 66.667 0.00 0.00 0.00 4.85
774 775 4.000557 CACACGTCACGCTGGCAC 62.001 66.667 0.00 0.00 0.00 5.01
775 776 4.522689 ACACGTCACGCTGGCACA 62.523 61.111 0.00 0.00 0.00 4.57
776 777 4.000557 CACGTCACGCTGGCACAC 62.001 66.667 0.00 0.00 0.00 3.82
778 779 4.969196 CGTCACGCTGGCACACCT 62.969 66.667 0.00 0.00 36.63 4.00
779 780 2.591715 GTCACGCTGGCACACCTT 60.592 61.111 0.00 0.00 36.63 3.50
780 781 2.591429 TCACGCTGGCACACCTTG 60.591 61.111 0.00 0.00 36.63 3.61
781 782 2.901840 CACGCTGGCACACCTTGT 60.902 61.111 0.00 0.00 36.63 3.16
782 783 1.596752 CACGCTGGCACACCTTGTA 60.597 57.895 0.00 0.00 36.63 2.41
783 784 1.597027 ACGCTGGCACACCTTGTAC 60.597 57.895 0.00 0.00 36.63 2.90
784 785 1.301716 CGCTGGCACACCTTGTACT 60.302 57.895 0.00 0.00 36.63 2.73
794 795 1.959226 CCTTGTACTGTTGGCGCGT 60.959 57.895 8.43 0.00 0.00 6.01
823 824 1.462616 CAAACGGCCCATCTCAATCA 58.537 50.000 0.00 0.00 0.00 2.57
844 845 4.058124 CACGAGTCCTTCTCATTTGACAA 58.942 43.478 0.00 0.00 42.88 3.18
848 849 4.899502 AGTCCTTCTCATTTGACAACGAT 58.100 39.130 0.00 0.00 0.00 3.73
859 860 7.471721 TCATTTGACAACGATCCATTGATTAC 58.528 34.615 10.55 2.02 0.00 1.89
903 904 7.864379 CCTTAAGCAACATGGCTCTTTATAATG 59.136 37.037 0.00 0.00 45.07 1.90
937 942 1.974236 AGCTCCAAGTACTCAGCAGTT 59.026 47.619 18.65 0.00 34.08 3.16
976 981 9.884465 CTCAACAAAAGAAAGTAAATAGAGGTG 57.116 33.333 0.00 0.00 0.00 4.00
1140 1145 4.742201 CTCACCGTGGTCAGCCCG 62.742 72.222 0.00 0.00 35.15 6.13
1162 1167 1.524863 CGTCCTCGAGGTCAACAGGT 61.525 60.000 30.17 0.00 39.71 4.00
1657 1662 3.655211 AGGGTTGGCAGGAGCAGG 61.655 66.667 0.00 0.00 44.61 4.85
1687 1692 4.749310 AAGCAGAGCCAGCCGACG 62.749 66.667 0.00 0.00 0.00 5.12
1717 1722 4.978083 ATGGAAATCATGAGCAAGTGAC 57.022 40.909 0.09 0.00 34.22 3.67
1722 1727 2.524569 TCATGAGCAAGTGACGAACA 57.475 45.000 0.00 0.00 0.00 3.18
1723 1728 3.044235 TCATGAGCAAGTGACGAACAT 57.956 42.857 0.00 0.00 0.00 2.71
1724 1729 4.186856 TCATGAGCAAGTGACGAACATA 57.813 40.909 0.00 0.00 0.00 2.29
1725 1730 4.758688 TCATGAGCAAGTGACGAACATAT 58.241 39.130 0.00 0.00 0.00 1.78
1726 1731 4.567959 TCATGAGCAAGTGACGAACATATG 59.432 41.667 0.00 0.00 0.00 1.78
1727 1732 3.925379 TGAGCAAGTGACGAACATATGT 58.075 40.909 1.41 1.41 0.00 2.29
1728 1733 3.679502 TGAGCAAGTGACGAACATATGTG 59.320 43.478 9.63 0.00 0.00 3.21
1731 1736 3.186409 GCAAGTGACGAACATATGTGTGT 59.814 43.478 9.63 10.91 38.92 3.72
1732 1737 4.701361 CAAGTGACGAACATATGTGTGTG 58.299 43.478 9.63 2.42 38.92 3.82
1735 1740 5.961272 AGTGACGAACATATGTGTGTGATA 58.039 37.500 9.63 0.00 38.92 2.15
1737 1742 5.805486 GTGACGAACATATGTGTGTGATACT 59.195 40.000 9.63 0.00 38.92 2.12
1738 1743 6.970613 GTGACGAACATATGTGTGTGATACTA 59.029 38.462 9.63 0.00 38.92 1.82
1739 1744 6.970613 TGACGAACATATGTGTGTGATACTAC 59.029 38.462 9.63 0.00 38.92 2.73
1788 1805 7.621832 TTTCGTTTTTCTTTGAGCACATATG 57.378 32.000 0.00 0.00 0.00 1.78
1958 5095 4.645136 AGATCCTCAATGTGACGCTACTAA 59.355 41.667 0.00 0.00 0.00 2.24
1959 5096 4.106029 TCCTCAATGTGACGCTACTAAC 57.894 45.455 0.00 0.00 0.00 2.34
1960 5097 3.762288 TCCTCAATGTGACGCTACTAACT 59.238 43.478 0.00 0.00 0.00 2.24
1961 5098 4.219944 TCCTCAATGTGACGCTACTAACTT 59.780 41.667 0.00 0.00 0.00 2.66
1965 5102 6.320171 TCAATGTGACGCTACTAACTTCTAC 58.680 40.000 0.00 0.00 0.00 2.59
1970 5107 5.352569 GTGACGCTACTAACTTCTACCACTA 59.647 44.000 0.00 0.00 0.00 2.74
1974 5111 6.093357 ACGCTACTAACTTCTACCACTAGAAC 59.907 42.308 0.00 0.00 34.57 3.01
1979 5116 8.418597 ACTAACTTCTACCACTAGAACATTGA 57.581 34.615 0.00 0.00 34.57 2.57
1982 5119 8.418597 AACTTCTACCACTAGAACATTGAGTA 57.581 34.615 0.00 0.00 34.57 2.59
1983 5120 8.596781 ACTTCTACCACTAGAACATTGAGTAT 57.403 34.615 0.00 0.00 34.57 2.12
1984 5121 8.688151 ACTTCTACCACTAGAACATTGAGTATC 58.312 37.037 0.00 0.00 34.57 2.24
1985 5122 8.824756 TTCTACCACTAGAACATTGAGTATCT 57.175 34.615 0.00 0.00 34.57 1.98
1986 5123 8.453238 TCTACCACTAGAACATTGAGTATCTC 57.547 38.462 0.00 0.00 34.92 2.75
1987 5124 8.275758 TCTACCACTAGAACATTGAGTATCTCT 58.724 37.037 0.00 0.00 34.92 3.10
1988 5125 9.562408 CTACCACTAGAACATTGAGTATCTCTA 57.438 37.037 0.00 0.00 34.92 2.43
1989 5126 8.458573 ACCACTAGAACATTGAGTATCTCTAG 57.541 38.462 0.00 0.00 38.76 2.43
1990 5127 7.504238 ACCACTAGAACATTGAGTATCTCTAGG 59.496 40.741 0.00 0.00 37.67 3.02
1991 5128 7.504238 CCACTAGAACATTGAGTATCTCTAGGT 59.496 40.741 0.00 0.00 37.67 3.08
1992 5129 9.562408 CACTAGAACATTGAGTATCTCTAGGTA 57.438 37.037 0.00 0.00 37.67 3.08
1993 5130 9.787435 ACTAGAACATTGAGTATCTCTAGGTAG 57.213 37.037 0.00 0.00 37.67 3.18
1994 5131 9.226606 CTAGAACATTGAGTATCTCTAGGTAGG 57.773 40.741 0.00 0.00 30.38 3.18
1995 5132 7.588169 AGAACATTGAGTATCTCTAGGTAGGT 58.412 38.462 0.00 0.00 30.38 3.08
1996 5133 8.725256 AGAACATTGAGTATCTCTAGGTAGGTA 58.275 37.037 0.00 0.00 30.38 3.08
1997 5134 9.352191 GAACATTGAGTATCTCTAGGTAGGTAA 57.648 37.037 0.00 0.00 30.38 2.85
1998 5135 9.884814 AACATTGAGTATCTCTAGGTAGGTAAT 57.115 33.333 0.00 0.00 30.38 1.89
2008 5145 8.144862 TCTCTAGGTAGGTAATAGTAGTAGCC 57.855 42.308 3.35 0.00 0.00 3.93
2009 5146 6.940739 TCTAGGTAGGTAATAGTAGTAGCCG 58.059 44.000 3.35 0.00 0.00 5.52
2010 5147 5.574970 AGGTAGGTAATAGTAGTAGCCGT 57.425 43.478 3.35 0.00 0.00 5.68
2011 5148 5.312079 AGGTAGGTAATAGTAGTAGCCGTG 58.688 45.833 3.35 0.00 0.00 4.94
2012 5149 5.072329 AGGTAGGTAATAGTAGTAGCCGTGA 59.928 44.000 3.35 0.00 0.00 4.35
2013 5150 5.411053 GGTAGGTAATAGTAGTAGCCGTGAG 59.589 48.000 3.35 0.00 0.00 3.51
2041 5178 4.675029 CGCCGACCCTCAAACCGT 62.675 66.667 0.00 0.00 0.00 4.83
2063 5200 1.368641 GCATATGTCTGGAACGCACA 58.631 50.000 4.29 0.00 0.00 4.57
2068 5205 1.069090 GTCTGGAACGCACAGTCCA 59.931 57.895 0.00 0.00 37.25 4.02
2072 5209 0.107410 TGGAACGCACAGTCCAAACT 60.107 50.000 0.00 0.00 35.60 2.66
2094 5231 3.969250 GAGGGCATCAAACGCGGGA 62.969 63.158 12.47 5.31 0.00 5.14
2130 5267 0.312729 GGCGGTCCGAACACATTTTT 59.687 50.000 17.49 0.00 0.00 1.94
2156 5294 4.401202 CCGCAAAATAAAGATAAGGTGGGT 59.599 41.667 0.00 0.00 0.00 4.51
2159 5297 5.186992 GCAAAATAAAGATAAGGTGGGTGGT 59.813 40.000 0.00 0.00 0.00 4.16
2163 5303 8.959676 AAATAAAGATAAGGTGGGTGGTTTTA 57.040 30.769 0.00 0.00 0.00 1.52
2173 5313 0.321919 GGTGGTTTTACGGGAGTCCC 60.322 60.000 19.37 19.37 45.66 4.46
2186 5326 0.179067 GAGTCCCGACAACAACCACA 60.179 55.000 0.00 0.00 0.00 4.17
2190 5330 1.134068 TCCCGACAACAACCACATTGA 60.134 47.619 0.00 0.00 41.23 2.57
2222 5362 1.689233 AGGCCTACTGAATCCGGCA 60.689 57.895 1.29 0.00 44.23 5.69
2253 5393 1.314730 TTTTCTTCCACTTCGCCACC 58.685 50.000 0.00 0.00 0.00 4.61
2288 5428 0.530870 GCATCCGCAACCTCTACCTC 60.531 60.000 0.00 0.00 38.36 3.85
2289 5429 0.105039 CATCCGCAACCTCTACCTCC 59.895 60.000 0.00 0.00 0.00 4.30
2290 5430 0.325296 ATCCGCAACCTCTACCTCCA 60.325 55.000 0.00 0.00 0.00 3.86
2291 5431 0.970937 TCCGCAACCTCTACCTCCAG 60.971 60.000 0.00 0.00 0.00 3.86
2297 5453 2.790791 CCTCTACCTCCAGCGCCAG 61.791 68.421 2.29 0.00 0.00 4.85
2410 5567 0.872388 CTGAAGCCGTTTGTACCCAC 59.128 55.000 0.00 0.00 0.00 4.61
2420 5577 3.555377 CGTTTGTACCCACATACACTCCA 60.555 47.826 0.00 0.00 36.68 3.86
2525 5687 5.334879 CCGTGTCATTTCAAAGTAAGAAGGG 60.335 44.000 0.00 0.00 0.00 3.95
2544 5707 1.683025 TGGCGGGGTACTCGATCAA 60.683 57.895 12.01 0.00 0.00 2.57
2670 5837 3.128589 CACAAAAGTACATTGCGCCCTAT 59.871 43.478 4.18 0.00 0.00 2.57
2681 5848 1.375853 GCGCCCTATGACATGCACAA 61.376 55.000 0.00 0.00 0.00 3.33
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
56 57 9.762933 ATGTGTAATTCTAAAAAGTGTTTGCAT 57.237 25.926 0.00 0.00 0.00 3.96
57 58 9.029243 CATGTGTAATTCTAAAAAGTGTTTGCA 57.971 29.630 0.00 0.00 0.00 4.08
58 59 9.030301 ACATGTGTAATTCTAAAAAGTGTTTGC 57.970 29.630 0.00 0.00 0.00 3.68
109 110 9.660180 GCCCAACTATTAATTTGGTAAAATTCA 57.340 29.630 14.89 0.00 43.41 2.57
110 111 9.660180 TGCCCAACTATTAATTTGGTAAAATTC 57.340 29.630 14.89 0.95 43.41 2.17
115 116 9.442047 CAAAATGCCCAACTATTAATTTGGTAA 57.558 29.630 14.89 5.96 40.75 2.85
116 117 8.816894 TCAAAATGCCCAACTATTAATTTGGTA 58.183 29.630 14.89 6.79 40.75 3.25
117 118 7.684529 TCAAAATGCCCAACTATTAATTTGGT 58.315 30.769 14.89 1.68 40.75 3.67
118 119 8.558973 TTCAAAATGCCCAACTATTAATTTGG 57.441 30.769 10.76 10.76 41.83 3.28
125 126 9.165035 CATGTAATTTCAAAATGCCCAACTATT 57.835 29.630 0.00 0.00 0.00 1.73
126 127 8.538701 TCATGTAATTTCAAAATGCCCAACTAT 58.461 29.630 0.00 0.00 0.00 2.12
127 128 7.901029 TCATGTAATTTCAAAATGCCCAACTA 58.099 30.769 0.00 0.00 0.00 2.24
128 129 6.767456 TCATGTAATTTCAAAATGCCCAACT 58.233 32.000 0.00 0.00 0.00 3.16
129 130 6.402442 GCTCATGTAATTTCAAAATGCCCAAC 60.402 38.462 0.00 0.00 0.00 3.77
130 131 5.642919 GCTCATGTAATTTCAAAATGCCCAA 59.357 36.000 0.00 0.00 0.00 4.12
131 132 5.046448 AGCTCATGTAATTTCAAAATGCCCA 60.046 36.000 0.00 0.00 0.00 5.36
132 133 5.422145 AGCTCATGTAATTTCAAAATGCCC 58.578 37.500 0.00 0.00 0.00 5.36
133 134 6.815142 AGAAGCTCATGTAATTTCAAAATGCC 59.185 34.615 0.00 0.00 0.00 4.40
134 135 7.823149 AGAAGCTCATGTAATTTCAAAATGC 57.177 32.000 0.00 0.00 0.00 3.56
139 140 9.897744 CACTAAAAGAAGCTCATGTAATTTCAA 57.102 29.630 0.00 0.00 0.00 2.69
140 141 9.066892 ACACTAAAAGAAGCTCATGTAATTTCA 57.933 29.630 0.00 0.00 0.00 2.69
150 151 9.216117 GGAGTAAATTACACTAAAAGAAGCTCA 57.784 33.333 5.89 0.00 0.00 4.26
151 152 9.438228 AGGAGTAAATTACACTAAAAGAAGCTC 57.562 33.333 5.89 0.00 0.00 4.09
231 232 6.262049 GGCCCATTTTCAACATGTTAGTTTTT 59.738 34.615 11.53 0.00 0.00 1.94
232 233 5.762711 GGCCCATTTTCAACATGTTAGTTTT 59.237 36.000 11.53 0.00 0.00 2.43
233 234 5.163258 TGGCCCATTTTCAACATGTTAGTTT 60.163 36.000 11.53 0.00 0.00 2.66
234 235 4.346418 TGGCCCATTTTCAACATGTTAGTT 59.654 37.500 11.53 0.00 0.00 2.24
235 236 3.900601 TGGCCCATTTTCAACATGTTAGT 59.099 39.130 11.53 0.00 0.00 2.24
236 237 4.244862 GTGGCCCATTTTCAACATGTTAG 58.755 43.478 11.53 6.25 0.00 2.34
237 238 3.643320 TGTGGCCCATTTTCAACATGTTA 59.357 39.130 11.53 0.00 0.00 2.41
238 239 2.437281 TGTGGCCCATTTTCAACATGTT 59.563 40.909 4.92 4.92 0.00 2.71
239 240 2.045524 TGTGGCCCATTTTCAACATGT 58.954 42.857 0.00 0.00 0.00 3.21
240 241 2.415776 GTGTGGCCCATTTTCAACATG 58.584 47.619 0.00 0.00 0.00 3.21
241 242 1.347378 GGTGTGGCCCATTTTCAACAT 59.653 47.619 0.00 0.00 0.00 2.71
242 243 0.755686 GGTGTGGCCCATTTTCAACA 59.244 50.000 0.00 0.00 0.00 3.33
243 244 0.755686 TGGTGTGGCCCATTTTCAAC 59.244 50.000 0.00 0.00 36.04 3.18
244 245 1.047002 CTGGTGTGGCCCATTTTCAA 58.953 50.000 0.00 0.00 36.04 2.69
245 246 0.831288 CCTGGTGTGGCCCATTTTCA 60.831 55.000 0.00 0.00 36.04 2.69
246 247 1.974543 CCTGGTGTGGCCCATTTTC 59.025 57.895 0.00 0.00 36.04 2.29
247 248 2.216331 GCCTGGTGTGGCCCATTTT 61.216 57.895 0.00 0.00 46.82 1.82
248 249 2.604382 GCCTGGTGTGGCCCATTT 60.604 61.111 0.00 0.00 46.82 2.32
258 259 2.852495 ATAACAGACCGCGCCTGGTG 62.852 60.000 22.13 2.05 44.01 4.17
260 261 0.597637 CTATAACAGACCGCGCCTGG 60.598 60.000 23.92 8.33 36.03 4.45
261 262 0.384309 TCTATAACAGACCGCGCCTG 59.616 55.000 20.33 20.33 37.64 4.85
262 263 0.384669 GTCTATAACAGACCGCGCCT 59.615 55.000 0.00 0.00 46.94 5.52
263 264 2.882793 GTCTATAACAGACCGCGCC 58.117 57.895 0.00 0.00 46.94 6.53
280 281 9.561069 CCTAAGTAGGATTGCTGTATTTTATGT 57.439 33.333 0.00 0.00 46.63 2.29
281 282 8.507249 GCCTAAGTAGGATTGCTGTATTTTATG 58.493 37.037 8.64 0.00 46.63 1.90
282 283 8.217799 TGCCTAAGTAGGATTGCTGTATTTTAT 58.782 33.333 8.64 0.00 46.63 1.40
283 284 7.570132 TGCCTAAGTAGGATTGCTGTATTTTA 58.430 34.615 8.64 0.00 46.63 1.52
284 285 6.423182 TGCCTAAGTAGGATTGCTGTATTTT 58.577 36.000 8.64 0.00 46.63 1.82
285 286 6.001449 TGCCTAAGTAGGATTGCTGTATTT 57.999 37.500 8.64 0.00 46.63 1.40
286 287 5.630415 TGCCTAAGTAGGATTGCTGTATT 57.370 39.130 8.64 0.00 46.63 1.89
287 288 5.307976 TCATGCCTAAGTAGGATTGCTGTAT 59.692 40.000 8.64 0.00 46.63 2.29
288 289 4.653801 TCATGCCTAAGTAGGATTGCTGTA 59.346 41.667 8.64 0.00 46.63 2.74
289 290 3.455910 TCATGCCTAAGTAGGATTGCTGT 59.544 43.478 8.64 0.00 46.63 4.40
290 291 4.077300 TCATGCCTAAGTAGGATTGCTG 57.923 45.455 8.64 0.00 46.63 4.41
291 292 4.164988 ACTTCATGCCTAAGTAGGATTGCT 59.835 41.667 8.64 0.00 46.63 3.91
292 293 4.274459 CACTTCATGCCTAAGTAGGATTGC 59.726 45.833 8.64 0.00 46.63 3.56
293 294 5.431765 ACACTTCATGCCTAAGTAGGATTG 58.568 41.667 8.64 4.88 46.63 2.67
294 295 5.675538 GACACTTCATGCCTAAGTAGGATT 58.324 41.667 8.64 0.00 46.63 3.01
295 296 4.202161 CGACACTTCATGCCTAAGTAGGAT 60.202 45.833 8.64 0.00 46.63 3.24
296 297 3.130516 CGACACTTCATGCCTAAGTAGGA 59.869 47.826 8.64 0.00 46.63 2.94
297 298 3.119101 ACGACACTTCATGCCTAAGTAGG 60.119 47.826 0.00 0.00 46.42 3.18
298 299 4.111375 ACGACACTTCATGCCTAAGTAG 57.889 45.455 0.00 0.00 35.44 2.57
299 300 4.242475 CAACGACACTTCATGCCTAAGTA 58.758 43.478 0.00 0.00 35.44 2.24
300 301 3.067106 CAACGACACTTCATGCCTAAGT 58.933 45.455 0.00 0.00 37.67 2.24
301 302 2.416547 CCAACGACACTTCATGCCTAAG 59.583 50.000 0.00 0.00 0.00 2.18
302 303 2.037902 TCCAACGACACTTCATGCCTAA 59.962 45.455 0.00 0.00 0.00 2.69
303 304 1.621317 TCCAACGACACTTCATGCCTA 59.379 47.619 0.00 0.00 0.00 3.93
304 305 0.396435 TCCAACGACACTTCATGCCT 59.604 50.000 0.00 0.00 0.00 4.75
305 306 1.131126 CATCCAACGACACTTCATGCC 59.869 52.381 0.00 0.00 0.00 4.40
306 307 1.131126 CCATCCAACGACACTTCATGC 59.869 52.381 0.00 0.00 0.00 4.06
307 308 2.674852 CTCCATCCAACGACACTTCATG 59.325 50.000 0.00 0.00 0.00 3.07
308 309 2.303022 ACTCCATCCAACGACACTTCAT 59.697 45.455 0.00 0.00 0.00 2.57
309 310 1.691976 ACTCCATCCAACGACACTTCA 59.308 47.619 0.00 0.00 0.00 3.02
310 311 2.069273 CACTCCATCCAACGACACTTC 58.931 52.381 0.00 0.00 0.00 3.01
311 312 1.270839 CCACTCCATCCAACGACACTT 60.271 52.381 0.00 0.00 0.00 3.16
312 313 0.321671 CCACTCCATCCAACGACACT 59.678 55.000 0.00 0.00 0.00 3.55
313 314 0.034896 ACCACTCCATCCAACGACAC 59.965 55.000 0.00 0.00 0.00 3.67
314 315 1.548719 CTACCACTCCATCCAACGACA 59.451 52.381 0.00 0.00 0.00 4.35
315 316 1.134788 CCTACCACTCCATCCAACGAC 60.135 57.143 0.00 0.00 0.00 4.34
316 317 1.191535 CCTACCACTCCATCCAACGA 58.808 55.000 0.00 0.00 0.00 3.85
317 318 1.191535 TCCTACCACTCCATCCAACG 58.808 55.000 0.00 0.00 0.00 4.10
318 319 2.677037 CGTTCCTACCACTCCATCCAAC 60.677 54.545 0.00 0.00 0.00 3.77
319 320 1.553248 CGTTCCTACCACTCCATCCAA 59.447 52.381 0.00 0.00 0.00 3.53
320 321 1.191535 CGTTCCTACCACTCCATCCA 58.808 55.000 0.00 0.00 0.00 3.41
321 322 0.464452 CCGTTCCTACCACTCCATCC 59.536 60.000 0.00 0.00 0.00 3.51
322 323 0.464452 CCCGTTCCTACCACTCCATC 59.536 60.000 0.00 0.00 0.00 3.51
323 324 0.042131 TCCCGTTCCTACCACTCCAT 59.958 55.000 0.00 0.00 0.00 3.41
324 325 0.901580 GTCCCGTTCCTACCACTCCA 60.902 60.000 0.00 0.00 0.00 3.86
325 326 0.901580 TGTCCCGTTCCTACCACTCC 60.902 60.000 0.00 0.00 0.00 3.85
326 327 1.136500 GATGTCCCGTTCCTACCACTC 59.864 57.143 0.00 0.00 0.00 3.51
327 328 1.192428 GATGTCCCGTTCCTACCACT 58.808 55.000 0.00 0.00 0.00 4.00
328 329 0.899720 TGATGTCCCGTTCCTACCAC 59.100 55.000 0.00 0.00 0.00 4.16
329 330 1.646912 TTGATGTCCCGTTCCTACCA 58.353 50.000 0.00 0.00 0.00 3.25
330 331 2.773993 TTTGATGTCCCGTTCCTACC 57.226 50.000 0.00 0.00 0.00 3.18
331 332 2.943033 CCATTTGATGTCCCGTTCCTAC 59.057 50.000 0.00 0.00 0.00 3.18
332 333 2.574369 ACCATTTGATGTCCCGTTCCTA 59.426 45.455 0.00 0.00 0.00 2.94
333 334 1.354368 ACCATTTGATGTCCCGTTCCT 59.646 47.619 0.00 0.00 0.00 3.36
334 335 1.834188 ACCATTTGATGTCCCGTTCC 58.166 50.000 0.00 0.00 0.00 3.62
335 336 3.247648 CGATACCATTTGATGTCCCGTTC 59.752 47.826 0.00 0.00 0.00 3.95
336 337 3.202906 CGATACCATTTGATGTCCCGTT 58.797 45.455 0.00 0.00 0.00 4.44
337 338 2.833794 CGATACCATTTGATGTCCCGT 58.166 47.619 0.00 0.00 0.00 5.28
338 339 1.531149 GCGATACCATTTGATGTCCCG 59.469 52.381 0.00 0.00 0.00 5.14
339 340 2.549754 CTGCGATACCATTTGATGTCCC 59.450 50.000 0.00 0.00 0.00 4.46
340 341 2.549754 CCTGCGATACCATTTGATGTCC 59.450 50.000 0.00 0.00 0.00 4.02
341 342 2.549754 CCCTGCGATACCATTTGATGTC 59.450 50.000 0.00 0.00 0.00 3.06
342 343 2.575532 CCCTGCGATACCATTTGATGT 58.424 47.619 0.00 0.00 0.00 3.06
343 344 1.267806 GCCCTGCGATACCATTTGATG 59.732 52.381 0.00 0.00 0.00 3.07
344 345 1.133823 TGCCCTGCGATACCATTTGAT 60.134 47.619 0.00 0.00 0.00 2.57
345 346 0.254462 TGCCCTGCGATACCATTTGA 59.746 50.000 0.00 0.00 0.00 2.69
346 347 0.664761 CTGCCCTGCGATACCATTTG 59.335 55.000 0.00 0.00 0.00 2.32
347 348 0.546122 TCTGCCCTGCGATACCATTT 59.454 50.000 0.00 0.00 0.00 2.32
348 349 0.767375 ATCTGCCCTGCGATACCATT 59.233 50.000 0.00 0.00 0.00 3.16
349 350 0.767375 AATCTGCCCTGCGATACCAT 59.233 50.000 0.00 0.00 0.00 3.55
350 351 1.419381 TAATCTGCCCTGCGATACCA 58.581 50.000 0.00 0.00 0.00 3.25
351 352 2.744202 CAATAATCTGCCCTGCGATACC 59.256 50.000 0.00 0.00 0.00 2.73
352 353 2.160417 GCAATAATCTGCCCTGCGATAC 59.840 50.000 0.00 0.00 36.25 2.24
353 354 2.224499 TGCAATAATCTGCCCTGCGATA 60.224 45.455 0.00 0.00 41.90 2.92
354 355 1.242076 GCAATAATCTGCCCTGCGAT 58.758 50.000 0.00 0.00 36.25 4.58
355 356 0.107263 TGCAATAATCTGCCCTGCGA 60.107 50.000 0.00 0.00 41.90 5.10
356 357 0.956633 ATGCAATAATCTGCCCTGCG 59.043 50.000 0.00 0.00 41.90 5.18
357 358 3.760151 TGATATGCAATAATCTGCCCTGC 59.240 43.478 0.00 0.00 41.90 4.85
358 359 5.417894 ACATGATATGCAATAATCTGCCCTG 59.582 40.000 0.00 0.00 41.90 4.45
359 360 5.577100 ACATGATATGCAATAATCTGCCCT 58.423 37.500 0.00 0.00 41.90 5.19
360 361 5.909621 ACATGATATGCAATAATCTGCCC 57.090 39.130 0.00 0.00 41.90 5.36
361 362 7.372714 TCAAACATGATATGCAATAATCTGCC 58.627 34.615 0.00 0.00 41.90 4.85
362 363 7.541091 CCTCAAACATGATATGCAATAATCTGC 59.459 37.037 0.00 0.00 42.95 4.26
363 364 8.789762 TCCTCAAACATGATATGCAATAATCTG 58.210 33.333 0.00 0.00 29.06 2.90
364 365 8.929260 TCCTCAAACATGATATGCAATAATCT 57.071 30.769 0.00 0.00 29.06 2.40
365 366 7.754027 GCTCCTCAAACATGATATGCAATAATC 59.246 37.037 0.00 0.00 29.06 1.75
366 367 7.231925 TGCTCCTCAAACATGATATGCAATAAT 59.768 33.333 0.00 0.00 29.06 1.28
367 368 6.546772 TGCTCCTCAAACATGATATGCAATAA 59.453 34.615 0.00 0.00 29.06 1.40
368 369 6.063404 TGCTCCTCAAACATGATATGCAATA 58.937 36.000 0.00 0.00 0.00 1.90
369 370 4.891168 TGCTCCTCAAACATGATATGCAAT 59.109 37.500 0.00 0.00 0.00 3.56
370 371 4.271661 TGCTCCTCAAACATGATATGCAA 58.728 39.130 0.00 0.00 0.00 4.08
371 372 3.888583 TGCTCCTCAAACATGATATGCA 58.111 40.909 0.00 0.00 0.00 3.96
372 373 5.449107 AATGCTCCTCAAACATGATATGC 57.551 39.130 0.00 0.00 0.00 3.14
373 374 8.627403 ACTAAAATGCTCCTCAAACATGATATG 58.373 33.333 0.00 0.00 0.00 1.78
374 375 8.757982 ACTAAAATGCTCCTCAAACATGATAT 57.242 30.769 0.00 0.00 0.00 1.63
375 376 8.049117 AGACTAAAATGCTCCTCAAACATGATA 58.951 33.333 0.00 0.00 0.00 2.15
376 377 6.888632 AGACTAAAATGCTCCTCAAACATGAT 59.111 34.615 0.00 0.00 0.00 2.45
377 378 6.240894 AGACTAAAATGCTCCTCAAACATGA 58.759 36.000 0.00 0.00 0.00 3.07
378 379 6.506500 AGACTAAAATGCTCCTCAAACATG 57.493 37.500 0.00 0.00 0.00 3.21
379 380 8.814038 ATTAGACTAAAATGCTCCTCAAACAT 57.186 30.769 0.00 0.00 0.00 2.71
380 381 9.733556 TTATTAGACTAAAATGCTCCTCAAACA 57.266 29.630 0.00 0.00 0.00 2.83
390 391 9.670719 GCCTTCTTGATTATTAGACTAAAATGC 57.329 33.333 0.00 0.00 0.00 3.56
395 396 8.893727 GCTTTGCCTTCTTGATTATTAGACTAA 58.106 33.333 0.00 0.00 0.00 2.24
396 397 7.499232 GGCTTTGCCTTCTTGATTATTAGACTA 59.501 37.037 0.73 0.00 46.69 2.59
397 398 6.319911 GGCTTTGCCTTCTTGATTATTAGACT 59.680 38.462 0.73 0.00 46.69 3.24
398 399 6.499172 GGCTTTGCCTTCTTGATTATTAGAC 58.501 40.000 0.73 0.00 46.69 2.59
399 400 6.699575 GGCTTTGCCTTCTTGATTATTAGA 57.300 37.500 0.73 0.00 46.69 2.10
415 416 2.770164 TCCTTGAGACTAGGCTTTGC 57.230 50.000 0.00 0.00 32.59 3.68
416 417 3.261897 TCCTTCCTTGAGACTAGGCTTTG 59.738 47.826 0.00 0.00 32.59 2.77
417 418 3.521727 TCCTTCCTTGAGACTAGGCTTT 58.478 45.455 0.00 0.00 32.59 3.51
418 419 3.191888 TCCTTCCTTGAGACTAGGCTT 57.808 47.619 0.00 0.00 32.59 4.35
419 420 2.930109 TCCTTCCTTGAGACTAGGCT 57.070 50.000 0.00 0.00 32.59 4.58
420 421 3.802866 CATTCCTTCCTTGAGACTAGGC 58.197 50.000 0.00 0.00 32.59 3.93
421 422 3.198635 TGCATTCCTTCCTTGAGACTAGG 59.801 47.826 0.00 0.00 0.00 3.02
422 423 4.478206 TGCATTCCTTCCTTGAGACTAG 57.522 45.455 0.00 0.00 0.00 2.57
423 424 4.908601 TTGCATTCCTTCCTTGAGACTA 57.091 40.909 0.00 0.00 0.00 2.59
424 425 3.795688 TTGCATTCCTTCCTTGAGACT 57.204 42.857 0.00 0.00 0.00 3.24
425 426 4.704057 AGAATTGCATTCCTTCCTTGAGAC 59.296 41.667 0.00 0.00 40.13 3.36
426 427 4.703575 CAGAATTGCATTCCTTCCTTGAGA 59.296 41.667 0.00 0.00 40.13 3.27
427 428 4.995124 CAGAATTGCATTCCTTCCTTGAG 58.005 43.478 0.00 0.00 40.13 3.02
446 447 9.394767 TGAGCATTTACAAATAATCTAAGCAGA 57.605 29.630 0.00 0.00 34.56 4.26
448 449 9.955208 CATGAGCATTTACAAATAATCTAAGCA 57.045 29.630 0.00 0.00 0.00 3.91
449 450 9.956720 ACATGAGCATTTACAAATAATCTAAGC 57.043 29.630 0.00 0.00 0.00 3.09
454 455 9.846248 GGGATACATGAGCATTTACAAATAATC 57.154 33.333 0.00 0.00 39.74 1.75
455 456 8.806146 GGGGATACATGAGCATTTACAAATAAT 58.194 33.333 0.00 0.00 39.74 1.28
456 457 7.232534 GGGGGATACATGAGCATTTACAAATAA 59.767 37.037 0.00 0.00 39.74 1.40
457 458 6.719370 GGGGGATACATGAGCATTTACAAATA 59.281 38.462 0.00 0.00 39.74 1.40
458 459 5.539955 GGGGGATACATGAGCATTTACAAAT 59.460 40.000 0.00 0.00 39.74 2.32
459 460 4.892934 GGGGGATACATGAGCATTTACAAA 59.107 41.667 0.00 0.00 39.74 2.83
460 461 4.079500 TGGGGGATACATGAGCATTTACAA 60.080 41.667 0.00 0.00 39.74 2.41
461 462 3.461458 TGGGGGATACATGAGCATTTACA 59.539 43.478 0.00 0.00 39.74 2.41
462 463 4.098914 TGGGGGATACATGAGCATTTAC 57.901 45.455 0.00 0.00 39.74 2.01
463 464 4.079500 TGTTGGGGGATACATGAGCATTTA 60.080 41.667 0.00 0.00 39.74 1.40
464 465 3.299503 GTTGGGGGATACATGAGCATTT 58.700 45.455 0.00 0.00 39.74 2.32
465 466 2.244510 TGTTGGGGGATACATGAGCATT 59.755 45.455 0.00 0.00 39.74 3.56
466 467 1.852309 TGTTGGGGGATACATGAGCAT 59.148 47.619 0.00 0.00 39.74 3.79
467 468 1.294041 TGTTGGGGGATACATGAGCA 58.706 50.000 0.00 0.00 39.74 4.26
468 469 2.664402 ATGTTGGGGGATACATGAGC 57.336 50.000 0.00 0.00 33.90 4.26
472 473 4.415179 TGTACATCATGTTGGGGGATACAT 59.585 41.667 0.00 0.00 35.45 2.29
473 474 3.783082 TGTACATCATGTTGGGGGATACA 59.217 43.478 0.00 4.81 39.74 2.29
474 475 4.431416 TGTACATCATGTTGGGGGATAC 57.569 45.455 0.00 2.52 0.00 2.24
475 476 4.042809 GGATGTACATCATGTTGGGGGATA 59.957 45.833 31.51 0.00 39.54 2.59
476 477 3.181429 GGATGTACATCATGTTGGGGGAT 60.181 47.826 31.51 0.00 39.54 3.85
477 478 2.174639 GGATGTACATCATGTTGGGGGA 59.825 50.000 31.51 0.00 39.54 4.81
478 479 2.091939 TGGATGTACATCATGTTGGGGG 60.092 50.000 31.51 0.00 39.54 5.40
479 480 3.295585 TGGATGTACATCATGTTGGGG 57.704 47.619 31.51 0.00 39.54 4.96
480 481 4.037089 CACATGGATGTACATCATGTTGGG 59.963 45.833 30.49 22.12 39.39 4.12
481 482 4.641541 ACACATGGATGTACATCATGTTGG 59.358 41.667 30.49 25.62 39.39 3.77
482 483 5.823209 ACACATGGATGTACATCATGTTG 57.177 39.130 30.49 27.22 39.39 3.33
490 491 9.719355 GGTGAAATATATACACATGGATGTACA 57.281 33.333 18.28 0.00 39.39 2.90
491 492 9.162764 GGGTGAAATATATACACATGGATGTAC 57.837 37.037 18.28 0.00 39.39 2.90
492 493 8.885346 TGGGTGAAATATATACACATGGATGTA 58.115 33.333 18.28 0.00 39.39 2.29
493 494 7.754624 TGGGTGAAATATATACACATGGATGT 58.245 34.615 18.28 0.00 42.84 3.06
494 495 8.812513 ATGGGTGAAATATATACACATGGATG 57.187 34.615 18.28 0.00 37.09 3.51
495 496 9.827198 AAATGGGTGAAATATATACACATGGAT 57.173 29.630 18.28 2.82 38.38 3.41
496 497 9.653516 AAAATGGGTGAAATATATACACATGGA 57.346 29.630 18.28 5.68 38.38 3.41
510 511 9.898152 AACTCTTTTTCATTAAAATGGGTGAAA 57.102 25.926 4.73 0.00 40.61 2.69
512 513 9.974980 GTAACTCTTTTTCATTAAAATGGGTGA 57.025 29.630 4.73 0.00 40.61 4.02
513 514 9.757227 TGTAACTCTTTTTCATTAAAATGGGTG 57.243 29.630 4.73 0.00 40.61 4.61
514 515 9.758651 GTGTAACTCTTTTTCATTAAAATGGGT 57.241 29.630 3.00 0.00 42.28 4.51
544 545 3.985279 GCAAAAACAGTACGGGAAAATCC 59.015 43.478 0.00 0.00 35.23 3.01
545 546 4.866921 AGCAAAAACAGTACGGGAAAATC 58.133 39.130 0.00 0.00 0.00 2.17
546 547 4.929819 AGCAAAAACAGTACGGGAAAAT 57.070 36.364 0.00 0.00 0.00 1.82
547 548 7.507733 TTATAGCAAAAACAGTACGGGAAAA 57.492 32.000 0.00 0.00 0.00 2.29
548 549 7.507733 TTTATAGCAAAAACAGTACGGGAAA 57.492 32.000 0.00 0.00 0.00 3.13
549 550 7.507733 TTTTATAGCAAAAACAGTACGGGAA 57.492 32.000 0.00 0.00 0.00 3.97
550 551 7.507733 TTTTTATAGCAAAAACAGTACGGGA 57.492 32.000 0.00 0.00 0.00 5.14
573 574 3.801307 ACCTTCCCGTGATACCTTTTT 57.199 42.857 0.00 0.00 0.00 1.94
574 575 3.370209 GCTACCTTCCCGTGATACCTTTT 60.370 47.826 0.00 0.00 0.00 2.27
575 576 2.169978 GCTACCTTCCCGTGATACCTTT 59.830 50.000 0.00 0.00 0.00 3.11
576 577 1.761198 GCTACCTTCCCGTGATACCTT 59.239 52.381 0.00 0.00 0.00 3.50
577 578 1.063114 AGCTACCTTCCCGTGATACCT 60.063 52.381 0.00 0.00 0.00 3.08
578 579 1.411041 AGCTACCTTCCCGTGATACC 58.589 55.000 0.00 0.00 0.00 2.73
579 580 3.004524 CACTAGCTACCTTCCCGTGATAC 59.995 52.174 1.81 0.00 0.00 2.24
580 581 3.220110 CACTAGCTACCTTCCCGTGATA 58.780 50.000 1.81 0.00 0.00 2.15
581 582 2.032620 CACTAGCTACCTTCCCGTGAT 58.967 52.381 1.81 0.00 0.00 3.06
582 583 1.471119 CACTAGCTACCTTCCCGTGA 58.529 55.000 1.81 0.00 0.00 4.35
583 584 0.179108 GCACTAGCTACCTTCCCGTG 60.179 60.000 0.00 0.00 37.91 4.94
584 585 1.328430 GGCACTAGCTACCTTCCCGT 61.328 60.000 0.00 0.00 41.70 5.28
585 586 1.442148 GGCACTAGCTACCTTCCCG 59.558 63.158 0.00 0.00 41.70 5.14
586 587 1.442148 CGGCACTAGCTACCTTCCC 59.558 63.158 0.00 0.00 41.70 3.97
587 588 1.442148 CCGGCACTAGCTACCTTCC 59.558 63.158 0.00 0.00 41.70 3.46
588 589 1.227292 GCCGGCACTAGCTACCTTC 60.227 63.158 24.80 0.00 41.70 3.46
589 590 1.961180 CTGCCGGCACTAGCTACCTT 61.961 60.000 29.03 0.00 41.70 3.50
590 591 2.363795 TGCCGGCACTAGCTACCT 60.364 61.111 29.03 0.00 41.70 3.08
591 592 2.107141 CTGCCGGCACTAGCTACC 59.893 66.667 29.03 0.00 41.70 3.18
592 593 2.107141 CCTGCCGGCACTAGCTAC 59.893 66.667 29.03 0.00 41.70 3.58
593 594 2.363795 ACCTGCCGGCACTAGCTA 60.364 61.111 29.03 1.63 41.70 3.32
594 595 4.087892 CACCTGCCGGCACTAGCT 62.088 66.667 29.03 0.00 41.70 3.32
596 597 4.473520 CCCACCTGCCGGCACTAG 62.474 72.222 29.03 19.78 0.00 2.57
603 604 4.489771 GATGGGTCCCACCTGCCG 62.490 72.222 14.57 0.00 38.64 5.69
604 605 4.129148 GGATGGGTCCCACCTGCC 62.129 72.222 14.57 8.96 38.64 4.85
605 606 4.489771 CGGATGGGTCCCACCTGC 62.490 72.222 14.57 2.31 41.83 4.85
606 607 2.072487 ATCGGATGGGTCCCACCTG 61.072 63.158 14.57 9.30 41.83 4.00
607 608 2.072487 CATCGGATGGGTCCCACCT 61.072 63.158 14.57 0.00 41.83 4.00
608 609 2.510906 CATCGGATGGGTCCCACC 59.489 66.667 14.57 15.44 41.83 4.61
609 610 2.203209 GCATCGGATGGGTCCCAC 60.203 66.667 14.57 7.36 41.83 4.61
610 611 3.488569 GGCATCGGATGGGTCCCA 61.489 66.667 14.64 14.64 41.83 4.37
611 612 3.488569 TGGCATCGGATGGGTCCC 61.489 66.667 18.96 11.83 41.83 4.46
612 613 2.203209 GTGGCATCGGATGGGTCC 60.203 66.667 18.96 12.16 41.40 4.46
613 614 1.819632 GTGTGGCATCGGATGGGTC 60.820 63.158 18.96 3.10 0.00 4.46
614 615 2.272146 GTGTGGCATCGGATGGGT 59.728 61.111 18.96 0.00 0.00 4.51
615 616 2.896854 CGTGTGGCATCGGATGGG 60.897 66.667 18.96 0.00 0.00 4.00
616 617 2.125147 ACGTGTGGCATCGGATGG 60.125 61.111 18.96 4.37 0.00 3.51
617 618 3.092403 CACGTGTGGCATCGGATG 58.908 61.111 13.63 13.63 0.00 3.51
618 619 1.955495 TAGCACGTGTGGCATCGGAT 61.955 55.000 18.38 8.79 0.00 4.18
619 620 1.955495 ATAGCACGTGTGGCATCGGA 61.955 55.000 18.38 0.00 0.00 4.55
620 621 1.089481 AATAGCACGTGTGGCATCGG 61.089 55.000 18.38 8.68 0.00 4.18
621 622 1.257936 GTAATAGCACGTGTGGCATCG 59.742 52.381 18.38 12.10 0.00 3.84
622 623 2.285220 CAGTAATAGCACGTGTGGCATC 59.715 50.000 18.38 4.74 0.00 3.91
623 624 2.279741 CAGTAATAGCACGTGTGGCAT 58.720 47.619 18.38 2.57 0.00 4.40
624 625 1.001520 ACAGTAATAGCACGTGTGGCA 59.998 47.619 18.38 0.01 0.00 4.92
625 626 1.722011 ACAGTAATAGCACGTGTGGC 58.278 50.000 18.38 2.26 0.00 5.01
626 627 4.927425 AGTAAACAGTAATAGCACGTGTGG 59.073 41.667 18.38 0.00 0.00 4.17
627 628 6.073980 ACAAGTAAACAGTAATAGCACGTGTG 60.074 38.462 18.38 7.97 0.00 3.82
628 629 5.987347 ACAAGTAAACAGTAATAGCACGTGT 59.013 36.000 18.38 6.65 0.00 4.49
629 630 6.144886 TGACAAGTAAACAGTAATAGCACGTG 59.855 38.462 12.28 12.28 0.00 4.49
630 631 6.218019 TGACAAGTAAACAGTAATAGCACGT 58.782 36.000 0.00 0.00 0.00 4.49
631 632 6.183360 CCTGACAAGTAAACAGTAATAGCACG 60.183 42.308 0.00 0.00 0.00 5.34
632 633 6.092259 CCCTGACAAGTAAACAGTAATAGCAC 59.908 42.308 0.00 0.00 0.00 4.40
633 634 6.170506 CCCTGACAAGTAAACAGTAATAGCA 58.829 40.000 0.00 0.00 0.00 3.49
634 635 5.585047 CCCCTGACAAGTAAACAGTAATAGC 59.415 44.000 0.00 0.00 0.00 2.97
635 636 6.708285 ACCCCTGACAAGTAAACAGTAATAG 58.292 40.000 0.00 0.00 0.00 1.73
636 637 6.691255 ACCCCTGACAAGTAAACAGTAATA 57.309 37.500 0.00 0.00 0.00 0.98
637 638 5.578157 ACCCCTGACAAGTAAACAGTAAT 57.422 39.130 0.00 0.00 0.00 1.89
638 639 5.376756 AACCCCTGACAAGTAAACAGTAA 57.623 39.130 0.00 0.00 0.00 2.24
639 640 5.376756 AAACCCCTGACAAGTAAACAGTA 57.623 39.130 0.00 0.00 0.00 2.74
640 641 3.945640 AACCCCTGACAAGTAAACAGT 57.054 42.857 0.00 0.00 0.00 3.55
641 642 5.588240 GAAAAACCCCTGACAAGTAAACAG 58.412 41.667 0.00 0.00 0.00 3.16
642 643 4.096682 CGAAAAACCCCTGACAAGTAAACA 59.903 41.667 0.00 0.00 0.00 2.83
643 644 4.096833 ACGAAAAACCCCTGACAAGTAAAC 59.903 41.667 0.00 0.00 0.00 2.01
644 645 4.271661 ACGAAAAACCCCTGACAAGTAAA 58.728 39.130 0.00 0.00 0.00 2.01
645 646 3.888583 ACGAAAAACCCCTGACAAGTAA 58.111 40.909 0.00 0.00 0.00 2.24
646 647 3.564053 ACGAAAAACCCCTGACAAGTA 57.436 42.857 0.00 0.00 0.00 2.24
647 648 2.430248 ACGAAAAACCCCTGACAAGT 57.570 45.000 0.00 0.00 0.00 3.16
648 649 4.131596 TCTTACGAAAAACCCCTGACAAG 58.868 43.478 0.00 0.00 0.00 3.16
649 650 4.153673 TCTTACGAAAAACCCCTGACAA 57.846 40.909 0.00 0.00 0.00 3.18
650 651 3.842007 TCTTACGAAAAACCCCTGACA 57.158 42.857 0.00 0.00 0.00 3.58
651 652 5.503662 TTTTCTTACGAAAAACCCCTGAC 57.496 39.130 4.76 0.00 43.93 3.51
660 661 7.256286 TCCGTTTTCCATTTTTCTTACGAAAA 58.744 30.769 3.18 3.18 44.89 2.29
661 662 6.793349 TCCGTTTTCCATTTTTCTTACGAAA 58.207 32.000 0.00 0.00 37.36 3.46
662 663 6.260493 TCTCCGTTTTCCATTTTTCTTACGAA 59.740 34.615 0.00 0.00 0.00 3.85
663 664 5.759273 TCTCCGTTTTCCATTTTTCTTACGA 59.241 36.000 0.00 0.00 0.00 3.43
664 665 5.992729 TCTCCGTTTTCCATTTTTCTTACG 58.007 37.500 0.00 0.00 0.00 3.18
665 666 7.198306 TCTCTCCGTTTTCCATTTTTCTTAC 57.802 36.000 0.00 0.00 0.00 2.34
666 667 7.094377 CCATCTCTCCGTTTTCCATTTTTCTTA 60.094 37.037 0.00 0.00 0.00 2.10
667 668 6.294731 CCATCTCTCCGTTTTCCATTTTTCTT 60.295 38.462 0.00 0.00 0.00 2.52
668 669 5.183904 CCATCTCTCCGTTTTCCATTTTTCT 59.816 40.000 0.00 0.00 0.00 2.52
669 670 5.402398 CCATCTCTCCGTTTTCCATTTTTC 58.598 41.667 0.00 0.00 0.00 2.29
670 671 4.220602 CCCATCTCTCCGTTTTCCATTTTT 59.779 41.667 0.00 0.00 0.00 1.94
671 672 3.763897 CCCATCTCTCCGTTTTCCATTTT 59.236 43.478 0.00 0.00 0.00 1.82
672 673 3.356290 CCCATCTCTCCGTTTTCCATTT 58.644 45.455 0.00 0.00 0.00 2.32
673 674 2.357154 CCCCATCTCTCCGTTTTCCATT 60.357 50.000 0.00 0.00 0.00 3.16
674 675 1.212935 CCCCATCTCTCCGTTTTCCAT 59.787 52.381 0.00 0.00 0.00 3.41
675 676 0.618458 CCCCATCTCTCCGTTTTCCA 59.382 55.000 0.00 0.00 0.00 3.53
676 677 0.107165 CCCCCATCTCTCCGTTTTCC 60.107 60.000 0.00 0.00 0.00 3.13
677 678 0.618981 ACCCCCATCTCTCCGTTTTC 59.381 55.000 0.00 0.00 0.00 2.29
678 679 1.073098 AACCCCCATCTCTCCGTTTT 58.927 50.000 0.00 0.00 0.00 2.43
679 680 0.328258 CAACCCCCATCTCTCCGTTT 59.672 55.000 0.00 0.00 0.00 3.60
680 681 1.991230 CAACCCCCATCTCTCCGTT 59.009 57.895 0.00 0.00 0.00 4.44
681 682 2.670148 GCAACCCCCATCTCTCCGT 61.670 63.158 0.00 0.00 0.00 4.69
682 683 2.190578 GCAACCCCCATCTCTCCG 59.809 66.667 0.00 0.00 0.00 4.63
683 684 0.039618 TTTGCAACCCCCATCTCTCC 59.960 55.000 0.00 0.00 0.00 3.71
684 685 1.923356 TTTTGCAACCCCCATCTCTC 58.077 50.000 0.00 0.00 0.00 3.20
685 686 2.397044 TTTTTGCAACCCCCATCTCT 57.603 45.000 0.00 0.00 0.00 3.10
704 705 4.202567 TGAAGATAGGAGTGTGGCCTTTTT 60.203 41.667 3.32 0.00 36.96 1.94
705 706 3.330701 TGAAGATAGGAGTGTGGCCTTTT 59.669 43.478 3.32 0.00 36.96 2.27
706 707 2.912956 TGAAGATAGGAGTGTGGCCTTT 59.087 45.455 3.32 0.00 36.96 3.11
707 708 2.551270 TGAAGATAGGAGTGTGGCCTT 58.449 47.619 3.32 0.00 36.96 4.35
708 709 2.254152 TGAAGATAGGAGTGTGGCCT 57.746 50.000 3.32 0.00 39.56 5.19
709 710 2.546795 CGATGAAGATAGGAGTGTGGCC 60.547 54.545 0.00 0.00 0.00 5.36
710 711 2.748605 CGATGAAGATAGGAGTGTGGC 58.251 52.381 0.00 0.00 0.00 5.01
711 712 2.546795 GGCGATGAAGATAGGAGTGTGG 60.547 54.545 0.00 0.00 0.00 4.17
712 713 2.546795 GGGCGATGAAGATAGGAGTGTG 60.547 54.545 0.00 0.00 0.00 3.82
713 714 1.689273 GGGCGATGAAGATAGGAGTGT 59.311 52.381 0.00 0.00 0.00 3.55
714 715 1.336332 CGGGCGATGAAGATAGGAGTG 60.336 57.143 0.00 0.00 0.00 3.51
715 716 0.962489 CGGGCGATGAAGATAGGAGT 59.038 55.000 0.00 0.00 0.00 3.85
716 717 1.248486 TCGGGCGATGAAGATAGGAG 58.752 55.000 0.00 0.00 0.00 3.69
717 718 1.819288 GATCGGGCGATGAAGATAGGA 59.181 52.381 0.00 0.00 34.60 2.94
718 719 1.546029 TGATCGGGCGATGAAGATAGG 59.454 52.381 0.00 0.00 34.60 2.57
719 720 2.230025 AGTGATCGGGCGATGAAGATAG 59.770 50.000 0.00 0.00 34.60 2.08
720 721 2.029918 CAGTGATCGGGCGATGAAGATA 60.030 50.000 0.00 0.00 34.60 1.98
721 722 1.043816 AGTGATCGGGCGATGAAGAT 58.956 50.000 0.00 0.00 34.60 2.40
722 723 0.103026 CAGTGATCGGGCGATGAAGA 59.897 55.000 0.00 0.00 34.60 2.87
723 724 0.103026 TCAGTGATCGGGCGATGAAG 59.897 55.000 0.00 0.00 34.60 3.02
724 725 0.179111 GTCAGTGATCGGGCGATGAA 60.179 55.000 0.00 0.00 34.60 2.57
725 726 1.319614 TGTCAGTGATCGGGCGATGA 61.320 55.000 0.00 0.00 34.60 2.92
726 727 1.141665 TGTCAGTGATCGGGCGATG 59.858 57.895 0.00 0.00 34.60 3.84
727 728 1.141881 GTGTCAGTGATCGGGCGAT 59.858 57.895 0.00 0.00 37.59 4.58
728 729 1.977009 AGTGTCAGTGATCGGGCGA 60.977 57.895 0.00 0.00 0.00 5.54
729 730 1.807165 CAGTGTCAGTGATCGGGCG 60.807 63.158 0.96 0.00 0.00 6.13
730 731 0.176680 ATCAGTGTCAGTGATCGGGC 59.823 55.000 16.12 0.00 33.14 6.13
731 732 2.544694 GCTATCAGTGTCAGTGATCGGG 60.545 54.545 23.54 16.24 38.98 5.14
732 733 2.736978 GCTATCAGTGTCAGTGATCGG 58.263 52.381 23.54 18.23 38.98 4.18
733 734 2.032178 TCGCTATCAGTGTCAGTGATCG 59.968 50.000 23.54 20.85 38.98 3.69
734 735 3.549827 CCTCGCTATCAGTGTCAGTGATC 60.550 52.174 23.54 11.64 38.98 2.92
735 736 2.360483 CCTCGCTATCAGTGTCAGTGAT 59.640 50.000 23.40 23.40 40.99 3.06
736 737 1.745653 CCTCGCTATCAGTGTCAGTGA 59.254 52.381 12.74 12.74 31.21 3.41
737 738 1.800655 GCCTCGCTATCAGTGTCAGTG 60.801 57.143 0.78 0.78 0.00 3.66
738 739 0.457851 GCCTCGCTATCAGTGTCAGT 59.542 55.000 0.00 0.00 0.00 3.41
739 740 0.457443 TGCCTCGCTATCAGTGTCAG 59.543 55.000 0.00 0.00 0.00 3.51
740 741 0.173481 GTGCCTCGCTATCAGTGTCA 59.827 55.000 0.00 0.00 0.00 3.58
741 742 0.173481 TGTGCCTCGCTATCAGTGTC 59.827 55.000 0.00 0.00 0.00 3.67
742 743 0.108615 GTGTGCCTCGCTATCAGTGT 60.109 55.000 0.00 0.00 0.00 3.55
743 744 1.142185 CGTGTGCCTCGCTATCAGTG 61.142 60.000 0.00 0.00 0.00 3.66
744 745 1.139734 CGTGTGCCTCGCTATCAGT 59.860 57.895 0.00 0.00 0.00 3.41
745 746 0.867753 GACGTGTGCCTCGCTATCAG 60.868 60.000 0.00 0.00 0.00 2.90
746 747 1.138883 GACGTGTGCCTCGCTATCA 59.861 57.895 0.00 0.00 0.00 2.15
747 748 1.138883 TGACGTGTGCCTCGCTATC 59.861 57.895 0.00 0.00 0.00 2.08
748 749 1.153823 GTGACGTGTGCCTCGCTAT 60.154 57.895 0.00 0.00 0.00 2.97
749 750 2.257371 GTGACGTGTGCCTCGCTA 59.743 61.111 0.00 0.00 0.00 4.26
753 754 3.406361 CAGCGTGACGTGTGCCTC 61.406 66.667 6.91 0.00 0.00 4.70
754 755 4.969196 CCAGCGTGACGTGTGCCT 62.969 66.667 6.91 0.00 0.00 4.75
757 758 4.000557 GTGCCAGCGTGACGTGTG 62.001 66.667 6.91 4.63 0.00 3.82
758 759 4.522689 TGTGCCAGCGTGACGTGT 62.523 61.111 6.91 0.00 0.00 4.49
759 760 4.000557 GTGTGCCAGCGTGACGTG 62.001 66.667 6.91 3.72 0.00 4.49
761 762 4.969196 AGGTGTGCCAGCGTGACG 62.969 66.667 0.00 0.00 36.92 4.35
762 763 2.591715 AAGGTGTGCCAGCGTGAC 60.592 61.111 0.00 0.00 36.92 3.67
763 764 2.034048 TACAAGGTGTGCCAGCGTGA 62.034 55.000 20.43 7.41 42.11 4.35
764 765 1.596752 TACAAGGTGTGCCAGCGTG 60.597 57.895 14.91 14.91 44.24 5.34
765 766 1.597027 GTACAAGGTGTGCCAGCGT 60.597 57.895 0.00 0.00 36.92 5.07
766 767 1.301716 AGTACAAGGTGTGCCAGCG 60.302 57.895 0.00 0.00 36.92 5.18
767 768 0.535102 ACAGTACAAGGTGTGCCAGC 60.535 55.000 0.00 0.00 33.24 4.85
768 769 1.603802 CAACAGTACAAGGTGTGCCAG 59.396 52.381 0.00 0.00 33.24 4.85
769 770 1.674359 CAACAGTACAAGGTGTGCCA 58.326 50.000 0.00 0.00 33.24 4.92
770 771 0.951558 CCAACAGTACAAGGTGTGCC 59.048 55.000 0.00 0.00 33.24 5.01
771 772 0.310854 GCCAACAGTACAAGGTGTGC 59.689 55.000 0.00 0.00 32.95 4.57
772 773 0.586319 CGCCAACAGTACAAGGTGTG 59.414 55.000 0.00 0.00 0.00 3.82
773 774 1.164041 GCGCCAACAGTACAAGGTGT 61.164 55.000 0.00 0.00 34.24 4.16
774 775 1.574428 GCGCCAACAGTACAAGGTG 59.426 57.895 0.00 0.00 34.83 4.00
775 776 1.959226 CGCGCCAACAGTACAAGGT 60.959 57.895 0.00 0.00 0.00 3.50
776 777 1.503818 AACGCGCCAACAGTACAAGG 61.504 55.000 5.73 0.00 0.00 3.61
777 778 0.384230 CAACGCGCCAACAGTACAAG 60.384 55.000 5.73 0.00 0.00 3.16
778 779 1.644372 CAACGCGCCAACAGTACAA 59.356 52.632 5.73 0.00 0.00 2.41
779 780 2.887889 GCAACGCGCCAACAGTACA 61.888 57.895 5.73 0.00 32.94 2.90
780 781 2.127383 GCAACGCGCCAACAGTAC 60.127 61.111 5.73 0.00 32.94 2.73
781 782 2.180862 TTGCAACGCGCCAACAGTA 61.181 52.632 5.73 0.00 41.33 2.74
782 783 3.513438 TTGCAACGCGCCAACAGT 61.513 55.556 5.73 0.00 41.33 3.55
783 784 3.024043 GTTGCAACGCGCCAACAG 61.024 61.111 24.01 0.28 41.33 3.16
784 785 4.896028 CGTTGCAACGCGCCAACA 62.896 61.111 35.89 11.77 46.06 3.33
801 802 0.960364 TTGAGATGGGCCGTTTGCTC 60.960 55.000 0.00 2.60 42.61 4.26
844 845 4.576463 GCAAGAAGGTAATCAATGGATCGT 59.424 41.667 0.00 0.00 31.88 3.73
848 849 5.191722 AGGTAGCAAGAAGGTAATCAATGGA 59.808 40.000 0.00 0.00 30.87 3.41
976 981 5.982890 TTTCCCTCTGAAATGTGAAATCC 57.017 39.130 0.00 0.00 38.04 3.01
1018 1023 4.491409 GGCGGAGGGAAGGGCTTC 62.491 72.222 0.00 0.00 38.80 3.86
1140 1145 3.379445 TTGACCTCGAGGACGCCC 61.379 66.667 37.69 19.18 39.58 6.13
1638 1643 3.177884 TGCTCCTGCCAACCCTGT 61.178 61.111 0.00 0.00 38.71 4.00
1657 1662 1.534595 CTCTGCTTTCTGACACAAGGC 59.465 52.381 0.00 0.00 0.00 4.35
1687 1692 1.117150 ATGATTTCCATGGGCACTGC 58.883 50.000 13.02 0.00 33.39 4.40
1717 1722 9.678941 AATAGTAGTATCACACACATATGTTCG 57.321 33.333 5.37 2.56 36.72 3.95
1756 1773 7.595502 TGCTCAAAGAAAAACGAAAAACAGTAA 59.404 29.630 0.00 0.00 0.00 2.24
1761 1778 6.147038 TGTGCTCAAAGAAAAACGAAAAAC 57.853 33.333 0.00 0.00 0.00 2.43
1763 1780 7.918033 TCATATGTGCTCAAAGAAAAACGAAAA 59.082 29.630 1.90 0.00 0.00 2.29
1788 1805 9.221933 ACTATGCAGTACACAGATAGTAGTATC 57.778 37.037 9.25 9.25 32.87 2.24
1926 5063 7.598869 GCGTCACATTGAGGATCTAACATTATA 59.401 37.037 0.15 0.00 34.44 0.98
1958 5095 6.919775 ACTCAATGTTCTAGTGGTAGAAGT 57.080 37.500 0.00 0.00 44.38 3.01
1959 5096 8.908903 AGATACTCAATGTTCTAGTGGTAGAAG 58.091 37.037 0.00 0.00 44.38 2.85
1960 5097 8.824756 AGATACTCAATGTTCTAGTGGTAGAA 57.175 34.615 0.00 0.00 42.05 2.10
1961 5098 8.275758 AGAGATACTCAATGTTCTAGTGGTAGA 58.724 37.037 0.00 0.00 31.16 2.59
1965 5102 7.504238 ACCTAGAGATACTCAATGTTCTAGTGG 59.496 40.741 0.00 0.00 32.06 4.00
1970 5107 7.588169 ACCTACCTAGAGATACTCAATGTTCT 58.412 38.462 0.00 0.00 32.06 3.01
1982 5119 8.771286 GGCTACTACTATTACCTACCTAGAGAT 58.229 40.741 0.00 0.00 0.00 2.75
1983 5120 7.093552 CGGCTACTACTATTACCTACCTAGAGA 60.094 44.444 0.00 0.00 0.00 3.10
1984 5121 7.041107 CGGCTACTACTATTACCTACCTAGAG 58.959 46.154 0.00 0.00 0.00 2.43
1985 5122 6.498651 ACGGCTACTACTATTACCTACCTAGA 59.501 42.308 0.00 0.00 0.00 2.43
1986 5123 6.593382 CACGGCTACTACTATTACCTACCTAG 59.407 46.154 0.00 0.00 0.00 3.02
1987 5124 6.270000 TCACGGCTACTACTATTACCTACCTA 59.730 42.308 0.00 0.00 0.00 3.08
1988 5125 5.072329 TCACGGCTACTACTATTACCTACCT 59.928 44.000 0.00 0.00 0.00 3.08
1989 5126 5.308825 TCACGGCTACTACTATTACCTACC 58.691 45.833 0.00 0.00 0.00 3.18
1990 5127 5.411053 CCTCACGGCTACTACTATTACCTAC 59.589 48.000 0.00 0.00 0.00 3.18
1991 5128 5.513788 CCCTCACGGCTACTACTATTACCTA 60.514 48.000 0.00 0.00 0.00 3.08
1992 5129 4.396522 CCTCACGGCTACTACTATTACCT 58.603 47.826 0.00 0.00 0.00 3.08
1993 5130 3.505293 CCCTCACGGCTACTACTATTACC 59.495 52.174 0.00 0.00 0.00 2.85
1994 5131 4.762956 CCCTCACGGCTACTACTATTAC 57.237 50.000 0.00 0.00 0.00 1.89
2007 5144 1.501741 CGTTGAAATGCCCTCACGG 59.498 57.895 0.00 0.00 0.00 4.94
2008 5145 1.154225 GCGTTGAAATGCCCTCACG 60.154 57.895 0.00 0.00 34.89 4.35
2009 5146 4.868195 GCGTTGAAATGCCCTCAC 57.132 55.556 0.00 0.00 34.89 3.51
2015 5152 2.178273 GGGTCGGCGTTGAAATGC 59.822 61.111 6.85 0.00 40.18 3.56
2016 5153 0.953471 TGAGGGTCGGCGTTGAAATG 60.953 55.000 6.85 0.00 0.00 2.32
2017 5154 0.250553 TTGAGGGTCGGCGTTGAAAT 60.251 50.000 6.85 0.00 0.00 2.17
2018 5155 0.464013 TTTGAGGGTCGGCGTTGAAA 60.464 50.000 6.85 0.00 0.00 2.69
2041 5178 0.529773 GCGTTCCAGACATATGCGGA 60.530 55.000 1.58 3.79 0.00 5.54
2068 5205 1.963515 GTTTGATGCCCTCCACAGTTT 59.036 47.619 0.00 0.00 0.00 2.66
2072 5209 1.971167 GCGTTTGATGCCCTCCACA 60.971 57.895 0.00 0.00 0.00 4.17
2078 5215 3.810896 GTCCCGCGTTTGATGCCC 61.811 66.667 4.92 0.00 0.00 5.36
2080 5217 1.017177 TACAGTCCCGCGTTTGATGC 61.017 55.000 4.92 0.00 0.00 3.91
2094 5231 0.739813 GCCAAGCGAACCGATACAGT 60.740 55.000 0.00 0.00 0.00 3.55
2130 5267 5.126384 CCACCTTATCTTTATTTTGCGGGAA 59.874 40.000 0.00 0.00 0.00 3.97
2142 5279 4.763279 CGTAAAACCACCCACCTTATCTTT 59.237 41.667 0.00 0.00 0.00 2.52
2143 5280 4.329392 CGTAAAACCACCCACCTTATCTT 58.671 43.478 0.00 0.00 0.00 2.40
2173 5313 3.548014 GGAGTTCAATGTGGTTGTTGTCG 60.548 47.826 0.00 0.00 38.95 4.35
2186 5326 0.324943 CTGGGGTGTCGGAGTTCAAT 59.675 55.000 0.00 0.00 0.00 2.57
2190 5330 3.637273 GCCTGGGGTGTCGGAGTT 61.637 66.667 0.00 0.00 0.00 3.01
2209 5349 1.745890 CGGGATGCCGGATTCAGTA 59.254 57.895 19.27 0.00 0.00 2.74
2220 5360 2.044123 AGAAAATGAGTCCGGGATGC 57.956 50.000 0.00 0.00 0.00 3.91
2222 5362 2.576191 TGGAAGAAAATGAGTCCGGGAT 59.424 45.455 0.00 0.00 32.45 3.85
2229 5369 2.814336 GGCGAAGTGGAAGAAAATGAGT 59.186 45.455 0.00 0.00 0.00 3.41
2253 5393 1.475682 GATGCAAAGCAAAGGGGAGAG 59.524 52.381 0.00 0.00 43.62 3.20
2288 5428 3.788766 GTACAACGCTGGCGCTGG 61.789 66.667 19.74 10.45 44.19 4.85
2289 5429 3.788766 GGTACAACGCTGGCGCTG 61.789 66.667 15.04 15.17 44.19 5.18
2290 5430 3.934391 GAGGTACAACGCTGGCGCT 62.934 63.158 15.04 0.00 44.19 5.92
2291 5431 3.488090 GAGGTACAACGCTGGCGC 61.488 66.667 15.04 0.00 44.19 6.53
2297 5453 0.456312 CGGTCAGAGAGGTACAACGC 60.456 60.000 0.00 0.00 0.00 4.84
2394 5551 2.224572 TGTATGTGGGTACAAACGGCTT 60.225 45.455 0.00 0.00 40.84 4.35
2410 5567 0.984230 ACAGGGTGGTGGAGTGTATG 59.016 55.000 0.00 0.00 0.00 2.39
2420 5577 3.300765 GGTCGTCGACAGGGTGGT 61.301 66.667 25.64 0.00 33.68 4.16
2503 5660 6.438763 CACCCTTCTTACTTTGAAATGACAC 58.561 40.000 0.00 0.00 0.00 3.67
2514 5676 1.683441 CCCGCCACCCTTCTTACTT 59.317 57.895 0.00 0.00 0.00 2.24
2525 5687 1.952102 TTGATCGAGTACCCCGCCAC 61.952 60.000 0.00 0.00 0.00 5.01
2544 5707 1.609061 CGCACAACAACTCATCCTCCT 60.609 52.381 0.00 0.00 0.00 3.69
2647 5814 1.268352 GGGCGCAATGTACTTTTGTGA 59.732 47.619 19.95 0.00 36.86 3.58
2681 5848 4.259356 CCTCATATTGCGATCATGGATGT 58.741 43.478 0.00 0.00 0.00 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.