Multiple sequence alignment - TraesCS3B01G196500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G196500 chr3B 100.000 4461 0 0 1 4461 223343002 223347462 0.000000e+00 8239.0
1 TraesCS3B01G196500 chr3B 82.262 778 113 14 2787 3551 5951536 5952301 0.000000e+00 649.0
2 TraesCS3B01G196500 chr3B 86.239 218 27 3 2365 2580 5950985 5951201 2.680000e-57 233.0
3 TraesCS3B01G196500 chr3B 96.667 60 2 0 2243 2302 602297826 602297885 2.840000e-17 100.0
4 TraesCS3B01G196500 chr3A 93.669 1390 74 8 2306 3683 178119866 178118479 0.000000e+00 2067.0
5 TraesCS3B01G196500 chr3A 88.915 1723 87 37 580 2244 178121548 178119872 0.000000e+00 2028.0
6 TraesCS3B01G196500 chr3A 84.805 770 113 3 3690 4459 741785043 741785808 0.000000e+00 771.0
7 TraesCS3B01G196500 chr3A 81.961 255 38 8 2365 2613 8867643 8867391 4.520000e-50 209.0
8 TraesCS3B01G196500 chr3A 96.875 64 2 0 2243 2306 523754144 523754081 1.700000e-19 108.0
9 TraesCS3B01G196500 chr3A 96.667 60 2 0 2243 2302 598544747 598544806 2.840000e-17 100.0
10 TraesCS3B01G196500 chr3D 92.382 1352 79 11 2297 3628 152673008 152674355 0.000000e+00 1905.0
11 TraesCS3B01G196500 chr3D 86.667 1470 93 36 494 1904 152671165 152672590 0.000000e+00 1533.0
12 TraesCS3B01G196500 chr3D 90.407 344 25 6 1901 2241 152672670 152673008 3.170000e-121 446.0
13 TraesCS3B01G196500 chr3D 85.748 421 44 9 4 421 123482654 123483061 8.860000e-117 431.0
14 TraesCS3B01G196500 chr3D 79.795 391 61 14 41 423 586540820 586540440 7.360000e-68 268.0
15 TraesCS3B01G196500 chr3D 83.650 263 30 8 2316 2568 772256 772515 7.460000e-58 235.0
16 TraesCS3B01G196500 chr3D 94.545 110 6 0 3581 3690 152674348 152674457 2.130000e-38 171.0
17 TraesCS3B01G196500 chr3D 93.750 64 4 0 2243 2306 402804155 402804092 3.670000e-16 97.1
18 TraesCS3B01G196500 chr6B 92.940 779 50 4 3682 4460 349497929 349498702 0.000000e+00 1129.0
19 TraesCS3B01G196500 chr7A 85.954 776 102 7 3682 4456 13649075 13649844 0.000000e+00 822.0
20 TraesCS3B01G196500 chr7D 87.149 677 85 1 3783 4459 436987064 436986390 0.000000e+00 767.0
21 TraesCS3B01G196500 chr7D 78.706 371 60 15 42 403 604274097 604274457 3.470000e-56 230.0
22 TraesCS3B01G196500 chr7D 77.778 396 70 17 59 445 403436731 403437117 1.250000e-55 228.0
23 TraesCS3B01G196500 chr1B 79.271 439 59 19 4 438 577603231 577603641 1.220000e-70 278.0
24 TraesCS3B01G196500 chr1B 95.161 62 3 0 2243 2304 3656277 3656338 1.020000e-16 99.0
25 TraesCS3B01G196500 chr2D 82.424 330 42 10 10 338 63743307 63743621 1.580000e-69 274.0
26 TraesCS3B01G196500 chr2D 78.406 389 61 17 46 423 531927070 531927446 9.650000e-57 231.0
27 TraesCS3B01G196500 chr2D 79.365 315 49 12 46 352 554478924 554478618 1.630000e-49 207.0
28 TraesCS3B01G196500 chr5D 79.781 366 57 13 46 403 387731118 387730762 2.660000e-62 250.0
29 TraesCS3B01G196500 chr4D 96.774 62 2 0 2243 2304 355714131 355714070 2.190000e-18 104.0
30 TraesCS3B01G196500 chr1D 96.774 62 2 0 2243 2304 905379 905440 2.190000e-18 104.0
31 TraesCS3B01G196500 chr6D 95.238 63 3 0 2243 2305 418954083 418954145 2.840000e-17 100.0
32 TraesCS3B01G196500 chr6A 95.238 63 3 0 2243 2305 562525487 562525549 2.840000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G196500 chr3B 223343002 223347462 4460 False 8239.00 8239 100.00000 1 4461 1 chr3B.!!$F1 4460
1 TraesCS3B01G196500 chr3B 5950985 5952301 1316 False 441.00 649 84.25050 2365 3551 2 chr3B.!!$F3 1186
2 TraesCS3B01G196500 chr3A 178118479 178121548 3069 True 2047.50 2067 91.29200 580 3683 2 chr3A.!!$R3 3103
3 TraesCS3B01G196500 chr3A 741785043 741785808 765 False 771.00 771 84.80500 3690 4459 1 chr3A.!!$F2 769
4 TraesCS3B01G196500 chr3D 152671165 152674457 3292 False 1013.75 1905 91.00025 494 3690 4 chr3D.!!$F3 3196
5 TraesCS3B01G196500 chr6B 349497929 349498702 773 False 1129.00 1129 92.94000 3682 4460 1 chr6B.!!$F1 778
6 TraesCS3B01G196500 chr7A 13649075 13649844 769 False 822.00 822 85.95400 3682 4456 1 chr7A.!!$F1 774
7 TraesCS3B01G196500 chr7D 436986390 436987064 674 True 767.00 767 87.14900 3783 4459 1 chr7D.!!$R1 676

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
250 251 0.104304 TTCGAATAGGAGAAGCGGGC 59.896 55.0 0.00 0.00 0.00 6.13 F
332 333 0.176219 TTATCCCGTAACGGCACCTG 59.824 55.0 0.00 0.00 46.86 4.00 F
1145 1174 0.034756 ACATCGGTGTGTTGCTGCTA 59.965 50.0 0.00 0.00 37.14 3.49 F
2888 3235 0.031178 CAAAGTGGGTGCAGCAAGAC 59.969 55.0 19.06 10.75 0.00 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1092 1121 0.035820 TTACCCGAGCCACAATGTCC 60.036 55.0 0.00 0.00 0.00 4.02 R
2262 2438 0.941463 CATAGCTCCCGCTTGCGTAG 60.941 60.0 13.97 11.35 46.47 3.51 R
3138 3495 0.991920 AATCACTGGGTCCGTCCATT 59.008 50.0 0.00 0.00 36.05 3.16 R
4317 4730 0.179000 GCACGGATCTTGGAGATGGT 59.821 55.0 0.00 0.00 34.53 3.55 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.403038 ACAAACTCTCAACCGAATCTGG 58.597 45.455 0.00 0.00 0.00 3.86
22 23 3.071023 ACAAACTCTCAACCGAATCTGGA 59.929 43.478 0.00 0.00 0.00 3.86
23 24 3.601443 AACTCTCAACCGAATCTGGAG 57.399 47.619 0.00 0.00 0.00 3.86
24 25 1.205893 ACTCTCAACCGAATCTGGAGC 59.794 52.381 0.00 0.00 0.00 4.70
25 26 0.173481 TCTCAACCGAATCTGGAGCG 59.827 55.000 0.00 0.00 0.00 5.03
26 27 1.424493 CTCAACCGAATCTGGAGCGC 61.424 60.000 0.00 0.00 0.00 5.92
27 28 1.741401 CAACCGAATCTGGAGCGCA 60.741 57.895 11.47 0.00 0.00 6.09
28 29 1.003839 AACCGAATCTGGAGCGCAA 60.004 52.632 11.47 0.00 0.00 4.85
29 30 1.298859 AACCGAATCTGGAGCGCAAC 61.299 55.000 11.47 1.37 0.00 4.17
30 31 2.464459 CCGAATCTGGAGCGCAACC 61.464 63.158 11.47 13.74 0.00 3.77
31 32 1.741401 CGAATCTGGAGCGCAACCA 60.741 57.895 21.49 21.49 35.96 3.67
36 37 4.020617 TGGAGCGCAACCAGGGAG 62.021 66.667 19.59 0.00 33.22 4.30
37 38 4.785453 GGAGCGCAACCAGGGAGG 62.785 72.222 11.47 0.00 45.67 4.30
38 39 3.706373 GAGCGCAACCAGGGAGGA 61.706 66.667 11.47 0.00 41.22 3.71
39 40 3.672295 GAGCGCAACCAGGGAGGAG 62.672 68.421 11.47 0.00 41.22 3.69
40 41 3.706373 GCGCAACCAGGGAGGAGA 61.706 66.667 0.30 0.00 41.22 3.71
41 42 2.581354 CGCAACCAGGGAGGAGAG 59.419 66.667 0.00 0.00 41.22 3.20
42 43 2.993853 GCAACCAGGGAGGAGAGG 59.006 66.667 0.00 0.00 41.22 3.69
43 44 2.674220 GCAACCAGGGAGGAGAGGG 61.674 68.421 0.00 0.00 41.22 4.30
44 45 1.081092 CAACCAGGGAGGAGAGGGA 59.919 63.158 0.00 0.00 41.22 4.20
45 46 0.980231 CAACCAGGGAGGAGAGGGAG 60.980 65.000 0.00 0.00 41.22 4.30
46 47 1.156322 AACCAGGGAGGAGAGGGAGA 61.156 60.000 0.00 0.00 41.22 3.71
47 48 1.156322 ACCAGGGAGGAGAGGGAGAA 61.156 60.000 0.00 0.00 41.22 2.87
48 49 0.398381 CCAGGGAGGAGAGGGAGAAG 60.398 65.000 0.00 0.00 41.22 2.85
49 50 0.633921 CAGGGAGGAGAGGGAGAAGA 59.366 60.000 0.00 0.00 0.00 2.87
50 51 0.933700 AGGGAGGAGAGGGAGAAGAG 59.066 60.000 0.00 0.00 0.00 2.85
51 52 0.105709 GGGAGGAGAGGGAGAAGAGG 60.106 65.000 0.00 0.00 0.00 3.69
52 53 0.634465 GGAGGAGAGGGAGAAGAGGT 59.366 60.000 0.00 0.00 0.00 3.85
53 54 1.687996 GGAGGAGAGGGAGAAGAGGTG 60.688 61.905 0.00 0.00 0.00 4.00
54 55 0.325203 AGGAGAGGGAGAAGAGGTGC 60.325 60.000 0.00 0.00 0.00 5.01
55 56 1.334384 GGAGAGGGAGAAGAGGTGCC 61.334 65.000 0.00 0.00 0.00 5.01
56 57 1.671901 GAGAGGGAGAAGAGGTGCCG 61.672 65.000 0.00 0.00 0.00 5.69
57 58 2.685380 AGGGAGAAGAGGTGCCGG 60.685 66.667 0.00 0.00 0.00 6.13
58 59 3.787001 GGGAGAAGAGGTGCCGGG 61.787 72.222 2.18 0.00 0.00 5.73
59 60 3.787001 GGAGAAGAGGTGCCGGGG 61.787 72.222 2.18 0.00 0.00 5.73
60 61 3.003763 GAGAAGAGGTGCCGGGGT 61.004 66.667 2.18 0.00 0.00 4.95
61 62 2.529389 AGAAGAGGTGCCGGGGTT 60.529 61.111 2.18 0.00 0.00 4.11
62 63 2.125766 GAGAAGAGGTGCCGGGGTTT 62.126 60.000 2.18 0.00 0.00 3.27
63 64 0.838987 AGAAGAGGTGCCGGGGTTTA 60.839 55.000 2.18 0.00 0.00 2.01
64 65 0.675837 GAAGAGGTGCCGGGGTTTAC 60.676 60.000 2.18 0.00 0.00 2.01
65 66 2.045634 GAGGTGCCGGGGTTTACC 60.046 66.667 2.18 0.00 39.11 2.85
66 67 2.530916 AGGTGCCGGGGTTTACCT 60.531 61.111 2.18 0.00 38.67 3.08
67 68 2.045634 GGTGCCGGGGTTTACCTC 60.046 66.667 2.18 0.00 40.03 3.85
68 69 2.045634 GTGCCGGGGTTTACCTCC 60.046 66.667 2.18 0.00 40.03 4.30
69 70 3.708544 TGCCGGGGTTTACCTCCG 61.709 66.667 16.94 16.94 44.27 4.63
71 72 4.478371 CCGGGGTTTACCTCCGCC 62.478 72.222 17.92 3.41 43.73 6.13
72 73 3.396570 CGGGGTTTACCTCCGCCT 61.397 66.667 13.39 0.00 40.86 5.52
73 74 2.271173 GGGGTTTACCTCCGCCTG 59.729 66.667 0.00 0.00 40.03 4.85
74 75 2.599757 GGGGTTTACCTCCGCCTGT 61.600 63.158 0.00 0.00 40.03 4.00
75 76 1.266867 GGGGTTTACCTCCGCCTGTA 61.267 60.000 0.00 0.00 40.03 2.74
76 77 0.177373 GGGTTTACCTCCGCCTGTAG 59.823 60.000 0.00 0.00 35.85 2.74
77 78 0.461516 GGTTTACCTCCGCCTGTAGC 60.462 60.000 0.00 0.00 38.52 3.58
78 79 0.461516 GTTTACCTCCGCCTGTAGCC 60.462 60.000 0.00 0.00 38.78 3.93
79 80 1.952102 TTTACCTCCGCCTGTAGCCG 61.952 60.000 0.00 0.00 38.78 5.52
82 83 4.514577 CTCCGCCTGTAGCCGGTG 62.515 72.222 1.90 0.00 38.78 4.94
84 85 4.814294 CCGCCTGTAGCCGGTGAC 62.814 72.222 1.90 1.51 38.78 3.67
85 86 3.760035 CGCCTGTAGCCGGTGACT 61.760 66.667 1.90 0.00 38.78 3.41
86 87 2.184579 GCCTGTAGCCGGTGACTC 59.815 66.667 1.90 0.00 34.35 3.36
87 88 2.646175 GCCTGTAGCCGGTGACTCA 61.646 63.158 1.90 0.00 34.35 3.41
88 89 1.215647 CCTGTAGCCGGTGACTCAC 59.784 63.158 1.90 0.00 0.00 3.51
128 129 4.368808 CACCGGCAACTTCGCGTG 62.369 66.667 5.77 2.81 0.00 5.34
132 133 2.746277 GGCAACTTCGCGTGGGAT 60.746 61.111 5.77 0.00 0.00 3.85
133 134 2.750888 GGCAACTTCGCGTGGGATC 61.751 63.158 5.77 0.00 0.00 3.36
134 135 2.750888 GCAACTTCGCGTGGGATCC 61.751 63.158 5.77 1.92 0.00 3.36
135 136 1.375396 CAACTTCGCGTGGGATCCA 60.375 57.895 15.23 0.00 0.00 3.41
144 145 2.350895 TGGGATCCACAACCGCAG 59.649 61.111 15.23 0.00 0.00 5.18
145 146 2.351276 GGGATCCACAACCGCAGT 59.649 61.111 15.23 0.00 0.00 4.40
146 147 1.195442 TGGGATCCACAACCGCAGTA 61.195 55.000 15.23 0.00 0.00 2.74
147 148 0.743345 GGGATCCACAACCGCAGTAC 60.743 60.000 15.23 0.00 0.00 2.73
148 149 0.743345 GGATCCACAACCGCAGTACC 60.743 60.000 6.95 0.00 0.00 3.34
149 150 0.249398 GATCCACAACCGCAGTACCT 59.751 55.000 0.00 0.00 0.00 3.08
150 151 0.249398 ATCCACAACCGCAGTACCTC 59.751 55.000 0.00 0.00 0.00 3.85
151 152 1.736645 CCACAACCGCAGTACCTCG 60.737 63.158 0.00 0.00 0.00 4.63
152 153 2.048503 ACAACCGCAGTACCTCGC 60.049 61.111 0.00 0.00 0.00 5.03
157 158 4.456253 CGCAGTACCTCGCGTCGT 62.456 66.667 5.77 5.99 46.23 4.34
158 159 2.576317 GCAGTACCTCGCGTCGTC 60.576 66.667 5.77 0.00 0.00 4.20
159 160 2.276493 CAGTACCTCGCGTCGTCG 60.276 66.667 5.77 0.00 40.37 5.12
160 161 2.740055 AGTACCTCGCGTCGTCGT 60.740 61.111 5.77 0.00 39.49 4.34
162 163 3.043713 TACCTCGCGTCGTCGTGT 61.044 61.111 14.76 5.04 46.03 4.49
163 164 3.015293 TACCTCGCGTCGTCGTGTC 62.015 63.158 14.76 0.00 46.03 3.67
165 166 4.714555 CTCGCGTCGTCGTGTCGT 62.715 66.667 14.76 0.00 46.03 4.34
166 167 4.297891 TCGCGTCGTCGTGTCGTT 62.298 61.111 14.76 0.00 46.03 3.85
167 168 4.087079 CGCGTCGTCGTGTCGTTG 62.087 66.667 7.45 0.00 41.80 4.10
168 169 4.390584 GCGTCGTCGTGTCGTTGC 62.391 66.667 3.66 0.00 39.49 4.17
169 170 2.724721 CGTCGTCGTGTCGTTGCT 60.725 61.111 0.00 0.00 0.00 3.91
170 171 1.439201 CGTCGTCGTGTCGTTGCTA 60.439 57.895 0.00 0.00 0.00 3.49
171 172 1.386293 CGTCGTCGTGTCGTTGCTAG 61.386 60.000 0.00 0.00 0.00 3.42
172 173 0.110509 GTCGTCGTGTCGTTGCTAGA 60.111 55.000 0.00 0.00 0.00 2.43
173 174 0.165295 TCGTCGTGTCGTTGCTAGAG 59.835 55.000 0.00 0.00 0.00 2.43
174 175 0.793478 CGTCGTGTCGTTGCTAGAGG 60.793 60.000 0.00 0.00 0.00 3.69
175 176 0.520404 GTCGTGTCGTTGCTAGAGGA 59.480 55.000 0.00 0.00 0.00 3.71
176 177 0.803117 TCGTGTCGTTGCTAGAGGAG 59.197 55.000 0.00 0.00 0.00 3.69
177 178 0.803117 CGTGTCGTTGCTAGAGGAGA 59.197 55.000 0.00 0.00 0.00 3.71
178 179 1.202087 CGTGTCGTTGCTAGAGGAGAG 60.202 57.143 0.00 0.00 0.00 3.20
179 180 1.133407 GTGTCGTTGCTAGAGGAGAGG 59.867 57.143 0.00 0.00 0.00 3.69
180 181 0.741915 GTCGTTGCTAGAGGAGAGGG 59.258 60.000 0.00 0.00 0.00 4.30
181 182 1.038130 TCGTTGCTAGAGGAGAGGGC 61.038 60.000 0.00 0.00 0.00 5.19
182 183 1.439644 GTTGCTAGAGGAGAGGGCG 59.560 63.158 0.00 0.00 0.00 6.13
183 184 1.758514 TTGCTAGAGGAGAGGGCGG 60.759 63.158 0.00 0.00 0.00 6.13
184 185 2.196229 GCTAGAGGAGAGGGCGGA 59.804 66.667 0.00 0.00 0.00 5.54
185 186 1.901464 GCTAGAGGAGAGGGCGGAG 60.901 68.421 0.00 0.00 0.00 4.63
186 187 1.840598 CTAGAGGAGAGGGCGGAGA 59.159 63.158 0.00 0.00 0.00 3.71
187 188 0.250727 CTAGAGGAGAGGGCGGAGAG 60.251 65.000 0.00 0.00 0.00 3.20
188 189 1.710996 TAGAGGAGAGGGCGGAGAGG 61.711 65.000 0.00 0.00 0.00 3.69
189 190 3.024356 AGGAGAGGGCGGAGAGGA 61.024 66.667 0.00 0.00 0.00 3.71
190 191 2.042843 GGAGAGGGCGGAGAGGAA 60.043 66.667 0.00 0.00 0.00 3.36
191 192 2.131067 GGAGAGGGCGGAGAGGAAG 61.131 68.421 0.00 0.00 0.00 3.46
192 193 2.042435 AGAGGGCGGAGAGGAAGG 60.042 66.667 0.00 0.00 0.00 3.46
193 194 2.042843 GAGGGCGGAGAGGAAGGA 60.043 66.667 0.00 0.00 0.00 3.36
194 195 2.042435 AGGGCGGAGAGGAAGGAG 60.042 66.667 0.00 0.00 0.00 3.69
195 196 2.364448 GGGCGGAGAGGAAGGAGT 60.364 66.667 0.00 0.00 0.00 3.85
196 197 1.990614 GGGCGGAGAGGAAGGAGTT 60.991 63.158 0.00 0.00 0.00 3.01
197 198 1.518302 GGCGGAGAGGAAGGAGTTC 59.482 63.158 0.00 0.00 0.00 3.01
198 199 1.139947 GCGGAGAGGAAGGAGTTCG 59.860 63.158 0.00 0.00 32.92 3.95
199 200 1.313812 GCGGAGAGGAAGGAGTTCGA 61.314 60.000 0.00 0.00 32.92 3.71
200 201 1.174783 CGGAGAGGAAGGAGTTCGAA 58.825 55.000 0.00 0.00 32.92 3.71
201 202 1.544691 CGGAGAGGAAGGAGTTCGAAA 59.455 52.381 0.00 0.00 32.92 3.46
202 203 2.166664 CGGAGAGGAAGGAGTTCGAAAT 59.833 50.000 0.00 0.00 32.92 2.17
203 204 3.526534 GGAGAGGAAGGAGTTCGAAATG 58.473 50.000 1.32 0.00 32.92 2.32
204 205 3.526534 GAGAGGAAGGAGTTCGAAATGG 58.473 50.000 1.32 0.00 32.92 3.16
205 206 3.173965 AGAGGAAGGAGTTCGAAATGGA 58.826 45.455 1.32 0.00 32.92 3.41
206 207 3.583086 AGAGGAAGGAGTTCGAAATGGAA 59.417 43.478 1.32 0.00 32.92 3.53
207 208 4.041691 AGAGGAAGGAGTTCGAAATGGAAA 59.958 41.667 1.32 0.00 32.92 3.13
208 209 4.327680 AGGAAGGAGTTCGAAATGGAAAG 58.672 43.478 1.32 0.00 32.92 2.62
209 210 3.440522 GGAAGGAGTTCGAAATGGAAAGG 59.559 47.826 1.32 0.00 32.92 3.11
210 211 3.073274 AGGAGTTCGAAATGGAAAGGG 57.927 47.619 1.32 0.00 0.00 3.95
211 212 2.092323 GGAGTTCGAAATGGAAAGGGG 58.908 52.381 1.32 0.00 0.00 4.79
212 213 2.290705 GGAGTTCGAAATGGAAAGGGGA 60.291 50.000 1.32 0.00 0.00 4.81
213 214 3.621558 GAGTTCGAAATGGAAAGGGGAT 58.378 45.455 1.32 0.00 0.00 3.85
214 215 4.017126 GAGTTCGAAATGGAAAGGGGATT 58.983 43.478 1.32 0.00 0.00 3.01
215 216 4.017126 AGTTCGAAATGGAAAGGGGATTC 58.983 43.478 0.00 0.00 0.00 2.52
216 217 2.639065 TCGAAATGGAAAGGGGATTCG 58.361 47.619 0.00 0.00 40.54 3.34
217 218 1.676006 CGAAATGGAAAGGGGATTCGG 59.324 52.381 0.00 0.00 36.83 4.30
218 219 2.031870 GAAATGGAAAGGGGATTCGGG 58.968 52.381 0.00 0.00 0.00 5.14
219 220 1.007607 AATGGAAAGGGGATTCGGGT 58.992 50.000 0.00 0.00 0.00 5.28
220 221 0.258774 ATGGAAAGGGGATTCGGGTG 59.741 55.000 0.00 0.00 0.00 4.61
221 222 0.842905 TGGAAAGGGGATTCGGGTGA 60.843 55.000 0.00 0.00 0.00 4.02
222 223 0.551396 GGAAAGGGGATTCGGGTGAT 59.449 55.000 0.00 0.00 0.00 3.06
223 224 1.680338 GAAAGGGGATTCGGGTGATG 58.320 55.000 0.00 0.00 0.00 3.07
224 225 0.258774 AAAGGGGATTCGGGTGATGG 59.741 55.000 0.00 0.00 0.00 3.51
225 226 2.203351 GGGGATTCGGGTGATGGC 60.203 66.667 0.00 0.00 0.00 4.40
226 227 2.591715 GGGATTCGGGTGATGGCG 60.592 66.667 0.00 0.00 0.00 5.69
227 228 3.279875 GGATTCGGGTGATGGCGC 61.280 66.667 0.00 0.00 0.00 6.53
228 229 2.513666 GATTCGGGTGATGGCGCA 60.514 61.111 10.83 0.00 0.00 6.09
229 230 2.514592 ATTCGGGTGATGGCGCAG 60.515 61.111 10.83 0.00 0.00 5.18
230 231 3.329542 ATTCGGGTGATGGCGCAGT 62.330 57.895 10.83 0.00 0.00 4.40
231 232 2.819984 ATTCGGGTGATGGCGCAGTT 62.820 55.000 10.83 0.00 0.00 3.16
232 233 3.055719 CGGGTGATGGCGCAGTTT 61.056 61.111 10.83 0.00 0.00 2.66
233 234 2.877691 GGGTGATGGCGCAGTTTC 59.122 61.111 10.83 0.00 0.00 2.78
234 235 2.480555 GGTGATGGCGCAGTTTCG 59.519 61.111 10.83 0.00 0.00 3.46
235 236 2.032634 GGTGATGGCGCAGTTTCGA 61.033 57.895 10.83 0.00 0.00 3.71
236 237 1.573829 GGTGATGGCGCAGTTTCGAA 61.574 55.000 10.83 0.00 0.00 3.71
237 238 0.447801 GTGATGGCGCAGTTTCGAAT 59.552 50.000 10.83 0.00 0.00 3.34
238 239 1.663643 GTGATGGCGCAGTTTCGAATA 59.336 47.619 10.83 0.00 0.00 1.75
239 240 1.933181 TGATGGCGCAGTTTCGAATAG 59.067 47.619 10.83 0.00 0.00 1.73
240 241 1.261619 GATGGCGCAGTTTCGAATAGG 59.738 52.381 10.83 0.00 0.00 2.57
241 242 0.248012 TGGCGCAGTTTCGAATAGGA 59.752 50.000 10.83 0.00 0.00 2.94
242 243 0.931005 GGCGCAGTTTCGAATAGGAG 59.069 55.000 10.83 0.00 0.00 3.69
243 244 1.470979 GGCGCAGTTTCGAATAGGAGA 60.471 52.381 10.83 0.00 0.00 3.71
244 245 2.268298 GCGCAGTTTCGAATAGGAGAA 58.732 47.619 0.30 0.00 0.00 2.87
245 246 2.282820 GCGCAGTTTCGAATAGGAGAAG 59.717 50.000 0.30 0.00 0.00 2.85
246 247 2.282820 CGCAGTTTCGAATAGGAGAAGC 59.717 50.000 0.00 0.00 0.00 3.86
247 248 2.282820 GCAGTTTCGAATAGGAGAAGCG 59.717 50.000 0.00 0.00 33.70 4.68
248 249 2.860735 CAGTTTCGAATAGGAGAAGCGG 59.139 50.000 0.00 0.00 33.70 5.52
249 250 2.159085 AGTTTCGAATAGGAGAAGCGGG 60.159 50.000 0.00 0.00 33.70 6.13
250 251 0.104304 TTCGAATAGGAGAAGCGGGC 59.896 55.000 0.00 0.00 0.00 6.13
251 252 1.661821 CGAATAGGAGAAGCGGGCG 60.662 63.158 0.00 0.00 0.00 6.13
252 253 1.301009 GAATAGGAGAAGCGGGCGG 60.301 63.158 0.00 0.00 0.00 6.13
253 254 2.029307 GAATAGGAGAAGCGGGCGGT 62.029 60.000 0.00 0.00 0.00 5.68
254 255 2.311688 AATAGGAGAAGCGGGCGGTG 62.312 60.000 0.00 0.00 0.00 4.94
265 266 3.670377 GGCGGTGTGGGCAGTTTC 61.670 66.667 0.00 0.00 0.00 2.78
266 267 4.025401 GCGGTGTGGGCAGTTTCG 62.025 66.667 0.00 0.00 0.00 3.46
267 268 4.025401 CGGTGTGGGCAGTTTCGC 62.025 66.667 0.00 0.00 0.00 4.70
279 280 2.917343 GCAGTTTCGCCTGAATTAAAGC 59.083 45.455 0.00 0.00 34.23 3.51
280 281 3.611530 GCAGTTTCGCCTGAATTAAAGCA 60.612 43.478 0.00 0.00 34.23 3.91
281 282 4.161333 CAGTTTCGCCTGAATTAAAGCAG 58.839 43.478 0.00 1.96 34.23 4.24
282 283 2.917343 GTTTCGCCTGAATTAAAGCAGC 59.083 45.455 3.17 0.00 33.20 5.25
283 284 1.094785 TCGCCTGAATTAAAGCAGCC 58.905 50.000 0.00 0.00 0.00 4.85
284 285 1.098050 CGCCTGAATTAAAGCAGCCT 58.902 50.000 0.00 0.00 0.00 4.58
285 286 1.202222 CGCCTGAATTAAAGCAGCCTG 60.202 52.381 0.00 0.00 0.00 4.85
286 287 1.135721 GCCTGAATTAAAGCAGCCTGG 59.864 52.381 0.00 0.00 0.00 4.45
287 288 1.753073 CCTGAATTAAAGCAGCCTGGG 59.247 52.381 0.00 0.00 0.00 4.45
288 289 1.135721 CTGAATTAAAGCAGCCTGGGC 59.864 52.381 3.00 3.00 42.33 5.36
289 290 0.461548 GAATTAAAGCAGCCTGGGCC 59.538 55.000 8.11 0.00 43.17 5.80
290 291 0.977627 AATTAAAGCAGCCTGGGCCC 60.978 55.000 17.59 17.59 43.17 5.80
291 292 2.166957 ATTAAAGCAGCCTGGGCCCA 62.167 55.000 26.67 26.67 43.17 5.36
292 293 3.583882 TAAAGCAGCCTGGGCCCAC 62.584 63.158 24.45 13.29 43.17 4.61
318 319 3.627218 GCACGTCGCGCCTTATCC 61.627 66.667 0.00 0.00 0.00 2.59
319 320 2.960129 CACGTCGCGCCTTATCCC 60.960 66.667 0.00 0.00 0.00 3.85
320 321 4.564116 ACGTCGCGCCTTATCCCG 62.564 66.667 0.00 0.00 0.00 5.14
321 322 4.564116 CGTCGCGCCTTATCCCGT 62.564 66.667 0.00 0.00 0.00 5.28
322 323 2.723746 GTCGCGCCTTATCCCGTA 59.276 61.111 0.00 0.00 0.00 4.02
323 324 1.066257 GTCGCGCCTTATCCCGTAA 59.934 57.895 0.00 0.00 0.00 3.18
324 325 1.066257 TCGCGCCTTATCCCGTAAC 59.934 57.895 0.00 0.00 0.00 2.50
325 326 2.297912 CGCGCCTTATCCCGTAACG 61.298 63.158 0.00 0.00 0.00 3.18
327 328 1.952635 CGCCTTATCCCGTAACGGC 60.953 63.158 0.00 0.00 46.86 5.68
328 329 1.144496 GCCTTATCCCGTAACGGCA 59.856 57.895 0.00 0.00 46.86 5.69
329 330 1.156034 GCCTTATCCCGTAACGGCAC 61.156 60.000 0.00 0.00 46.86 5.01
330 331 0.531311 CCTTATCCCGTAACGGCACC 60.531 60.000 0.00 0.00 46.86 5.01
331 332 0.462789 CTTATCCCGTAACGGCACCT 59.537 55.000 0.00 0.00 46.86 4.00
332 333 0.176219 TTATCCCGTAACGGCACCTG 59.824 55.000 0.00 0.00 46.86 4.00
333 334 1.678598 TATCCCGTAACGGCACCTGG 61.679 60.000 0.00 0.00 46.86 4.45
334 335 4.011517 CCCGTAACGGCACCTGGT 62.012 66.667 0.00 0.00 46.86 4.00
335 336 2.433664 CCGTAACGGCACCTGGTC 60.434 66.667 0.00 0.00 41.17 4.02
369 370 4.965858 GGTCGGAGCGATCGAGCG 62.966 72.222 20.40 20.40 43.42 5.03
383 384 2.827190 AGCGCATCGGACGGTCTA 60.827 61.111 11.47 0.00 36.32 2.59
384 385 2.103538 GCGCATCGGACGGTCTAA 59.896 61.111 0.30 0.00 0.00 2.10
385 386 1.944676 GCGCATCGGACGGTCTAAG 60.945 63.158 0.30 0.64 0.00 2.18
386 387 1.944676 CGCATCGGACGGTCTAAGC 60.945 63.158 8.23 6.70 0.00 3.09
387 388 1.944676 GCATCGGACGGTCTAAGCG 60.945 63.158 8.23 3.21 45.69 4.68
388 389 1.944676 CATCGGACGGTCTAAGCGC 60.945 63.158 8.23 0.00 43.79 5.92
389 390 3.465296 ATCGGACGGTCTAAGCGCG 62.465 63.158 0.00 0.00 43.79 6.86
390 391 4.471726 CGGACGGTCTAAGCGCGT 62.472 66.667 8.43 0.00 43.79 6.01
391 392 2.879462 GGACGGTCTAAGCGCGTG 60.879 66.667 8.43 0.00 43.79 5.34
392 393 3.542742 GACGGTCTAAGCGCGTGC 61.543 66.667 14.39 14.39 43.79 5.34
407 408 4.512961 TGCGCTCGCGACATCCAT 62.513 61.111 16.26 0.00 45.51 3.41
408 409 3.696426 GCGCTCGCGACATCCATC 61.696 66.667 16.26 0.00 42.83 3.51
409 410 3.032609 CGCTCGCGACATCCATCC 61.033 66.667 3.71 0.00 42.83 3.51
410 411 3.032609 GCTCGCGACATCCATCCG 61.033 66.667 3.71 0.00 0.00 4.18
411 412 2.355126 CTCGCGACATCCATCCGG 60.355 66.667 3.71 0.00 0.00 5.14
412 413 4.585526 TCGCGACATCCATCCGGC 62.586 66.667 3.71 0.00 0.00 6.13
413 414 4.889856 CGCGACATCCATCCGGCA 62.890 66.667 0.00 0.00 0.00 5.69
414 415 3.272334 GCGACATCCATCCGGCAC 61.272 66.667 0.00 0.00 0.00 5.01
415 416 2.186644 CGACATCCATCCGGCACA 59.813 61.111 0.00 0.00 0.00 4.57
416 417 1.884464 CGACATCCATCCGGCACAG 60.884 63.158 0.00 0.00 0.00 3.66
417 418 2.124570 ACATCCATCCGGCACAGC 60.125 61.111 0.00 0.00 0.00 4.40
418 419 2.191375 CATCCATCCGGCACAGCT 59.809 61.111 0.00 0.00 0.00 4.24
419 420 2.184830 CATCCATCCGGCACAGCTG 61.185 63.158 13.48 13.48 34.23 4.24
420 421 4.783621 TCCATCCGGCACAGCTGC 62.784 66.667 15.27 0.33 43.41 5.25
422 423 3.807538 CATCCGGCACAGCTGCAC 61.808 66.667 15.27 5.74 46.28 4.57
423 424 4.025858 ATCCGGCACAGCTGCACT 62.026 61.111 15.27 0.00 46.28 4.40
436 437 5.213913 CAGCTGCACTGTGAAGTATTTAG 57.786 43.478 16.91 0.00 41.86 1.85
437 438 4.093998 CAGCTGCACTGTGAAGTATTTAGG 59.906 45.833 16.91 0.00 41.86 2.69
438 439 3.375299 GCTGCACTGTGAAGTATTTAGGG 59.625 47.826 16.91 0.00 0.00 3.53
439 440 4.832248 CTGCACTGTGAAGTATTTAGGGA 58.168 43.478 12.86 0.00 0.00 4.20
440 441 4.575885 TGCACTGTGAAGTATTTAGGGAC 58.424 43.478 12.86 0.00 0.00 4.46
441 442 4.041075 TGCACTGTGAAGTATTTAGGGACA 59.959 41.667 12.86 0.00 0.00 4.02
442 443 5.186198 GCACTGTGAAGTATTTAGGGACAT 58.814 41.667 12.86 0.00 0.00 3.06
443 444 5.648092 GCACTGTGAAGTATTTAGGGACATT 59.352 40.000 12.86 0.00 0.00 2.71
444 445 6.151144 GCACTGTGAAGTATTTAGGGACATTT 59.849 38.462 12.86 0.00 0.00 2.32
445 446 7.335924 GCACTGTGAAGTATTTAGGGACATTTA 59.664 37.037 12.86 0.00 0.00 1.40
446 447 9.396022 CACTGTGAAGTATTTAGGGACATTTAT 57.604 33.333 0.32 0.00 0.00 1.40
447 448 9.975218 ACTGTGAAGTATTTAGGGACATTTATT 57.025 29.630 0.00 0.00 0.00 1.40
492 493 8.763049 TGCTATTTTACAGGATCTATTCGATG 57.237 34.615 0.00 0.00 30.84 3.84
496 497 8.964476 ATTTTACAGGATCTATTCGATGTGTT 57.036 30.769 0.00 0.00 31.56 3.32
533 536 5.824097 ACACTACGTTTAAAGGTTTGACCAT 59.176 36.000 17.83 0.00 41.95 3.55
541 544 7.468441 GTTTAAAGGTTTGACCATTTTTGGTG 58.532 34.615 1.66 0.00 43.24 4.17
581 584 4.323477 AACAGCGCCGCCTTGGTA 62.323 61.111 4.98 0.00 41.21 3.25
582 585 3.835790 AACAGCGCCGCCTTGGTAA 62.836 57.895 4.98 0.00 41.21 2.85
583 586 3.053291 CAGCGCCGCCTTGGTAAA 61.053 61.111 4.98 0.00 41.21 2.01
584 587 2.045340 AGCGCCGCCTTGGTAAAT 60.045 55.556 4.98 0.00 41.21 1.40
585 588 2.102161 GCGCCGCCTTGGTAAATG 59.898 61.111 0.00 0.00 41.21 2.32
586 589 2.696759 GCGCCGCCTTGGTAAATGT 61.697 57.895 0.00 0.00 41.21 2.71
587 590 1.370587 GCGCCGCCTTGGTAAATGTA 61.371 55.000 0.00 0.00 41.21 2.29
594 614 3.312421 CGCCTTGGTAAATGTACTCATGG 59.688 47.826 10.00 10.00 34.19 3.66
753 775 2.550180 CTCGAGATCGCAAGGTATCTCA 59.450 50.000 6.58 0.80 45.56 3.27
821 843 2.052782 ATTTCCCCTTTCGATTCGGG 57.947 50.000 6.18 7.11 37.73 5.14
830 852 2.203070 CGATTCGGGCCCCTCTTG 60.203 66.667 18.66 0.58 0.00 3.02
862 890 0.589223 TGAATTCGGTGTGGTTTCGC 59.411 50.000 0.04 0.00 0.00 4.70
874 902 0.819666 GGTTTCGCATCCCCTCCATC 60.820 60.000 0.00 0.00 0.00 3.51
910 939 4.870363 ACCTGTGATCAAATTCGGTTTTG 58.130 39.130 0.00 5.06 37.83 2.44
1009 1038 2.237143 ACCGATTTTCAGATGAGGCTGA 59.763 45.455 0.00 0.00 42.81 4.26
1055 1084 1.446966 GGAAGAGCACCGTCTCTGC 60.447 63.158 0.73 0.00 42.25 4.26
1137 1166 0.036732 AGCATCCAACATCGGTGTGT 59.963 50.000 0.00 0.00 38.92 3.72
1138 1167 0.881118 GCATCCAACATCGGTGTGTT 59.119 50.000 0.00 0.00 42.75 3.32
1143 1172 1.654220 AACATCGGTGTGTTGCTGC 59.346 52.632 0.00 0.00 40.60 5.25
1144 1173 0.819259 AACATCGGTGTGTTGCTGCT 60.819 50.000 0.00 0.00 40.60 4.24
1145 1174 0.034756 ACATCGGTGTGTTGCTGCTA 59.965 50.000 0.00 0.00 37.14 3.49
1146 1175 0.443869 CATCGGTGTGTTGCTGCTAC 59.556 55.000 7.29 7.29 0.00 3.58
1147 1176 0.321671 ATCGGTGTGTTGCTGCTACT 59.678 50.000 14.81 0.00 0.00 2.57
1148 1177 0.963225 TCGGTGTGTTGCTGCTACTA 59.037 50.000 14.81 2.30 0.00 1.82
1206 1253 7.870954 TGTTTTACTCGATTCAGTCACAACTAT 59.129 33.333 0.00 0.00 33.25 2.12
1215 1262 7.415318 CGATTCAGTCACAACTATGGTAGTACT 60.415 40.741 0.00 0.00 38.26 2.73
1216 1263 8.818622 ATTCAGTCACAACTATGGTAGTACTA 57.181 34.615 0.00 0.00 38.26 1.82
1217 1264 7.621428 TCAGTCACAACTATGGTAGTACTAC 57.379 40.000 22.53 22.53 38.26 2.73
1285 1343 1.547372 CTCACATCAGCTTTTTGGGGG 59.453 52.381 0.00 0.00 0.00 5.40
1299 1357 6.571731 GCTTTTTGGGGGTAAATAGTTCTGTC 60.572 42.308 0.00 0.00 0.00 3.51
1400 1468 1.627329 TCTCTGAGAACTGGCAGCAAT 59.373 47.619 15.89 0.25 32.27 3.56
1416 1487 4.864247 GCAGCAATACTTGGTAATTTGGTG 59.136 41.667 13.92 13.92 44.40 4.17
1432 1503 9.620660 GTAATTTGGTGTTGACTTTAACTATGG 57.379 33.333 0.00 0.00 0.00 2.74
1496 1567 1.244019 ATGTTGAGGGCAAAGGCGTC 61.244 55.000 6.35 6.35 42.47 5.19
1497 1568 2.668212 TTGAGGGCAAAGGCGTCG 60.668 61.111 8.39 0.00 44.07 5.12
1552 1636 2.698274 TGCAGACTCACAGTAACAGGAA 59.302 45.455 0.00 0.00 0.00 3.36
1559 1643 4.058817 CTCACAGTAACAGGAACAGAACC 58.941 47.826 0.00 0.00 0.00 3.62
1634 1719 4.156739 CCCTCCTTCTTTGTTATTCAGTGC 59.843 45.833 0.00 0.00 0.00 4.40
1788 1873 0.469917 ATGGGAGTAGATTGGCGTGG 59.530 55.000 0.00 0.00 0.00 4.94
1940 2108 6.252995 ACTATGTTTTATCTTTGGGGCTTCA 58.747 36.000 0.00 0.00 0.00 3.02
1946 2114 1.065410 TCTTTGGGGCTTCAGGGTGA 61.065 55.000 0.00 0.00 0.00 4.02
1960 2128 6.514012 TTCAGGGTGATGTATGACCATAAT 57.486 37.500 2.99 0.00 35.61 1.28
1971 2139 6.288294 TGTATGACCATAATAACTGACAGGC 58.712 40.000 7.51 0.00 0.00 4.85
1973 2141 5.023533 TGACCATAATAACTGACAGGCTC 57.976 43.478 7.51 0.00 0.00 4.70
1985 2153 3.717707 TGACAGGCTCATTATAGCGTTC 58.282 45.455 0.00 0.00 43.74 3.95
2047 2215 4.666402 GCAAACGTGATTTTAGCCAATTGC 60.666 41.667 0.00 0.00 41.71 3.56
2110 2278 9.136323 GGGATGATAAAAATCAATGGTAGAACT 57.864 33.333 0.00 0.00 33.83 3.01
2250 2426 3.873805 GCTTTTTGCAGTCAGACCC 57.126 52.632 0.00 0.00 42.31 4.46
2251 2427 1.322442 GCTTTTTGCAGTCAGACCCT 58.678 50.000 0.00 0.00 42.31 4.34
2252 2428 1.683385 GCTTTTTGCAGTCAGACCCTT 59.317 47.619 0.00 0.00 42.31 3.95
2253 2429 2.287849 GCTTTTTGCAGTCAGACCCTTC 60.288 50.000 0.00 0.00 42.31 3.46
2254 2430 1.981256 TTTTGCAGTCAGACCCTTCC 58.019 50.000 0.00 0.00 0.00 3.46
2255 2431 0.110486 TTTGCAGTCAGACCCTTCCC 59.890 55.000 0.00 0.00 0.00 3.97
2256 2432 1.779061 TTGCAGTCAGACCCTTCCCC 61.779 60.000 0.00 0.00 0.00 4.81
2257 2433 2.982130 CAGTCAGACCCTTCCCCG 59.018 66.667 0.00 0.00 0.00 5.73
2258 2434 2.284699 AGTCAGACCCTTCCCCGG 60.285 66.667 0.00 0.00 0.00 5.73
2259 2435 2.284405 GTCAGACCCTTCCCCGGA 60.284 66.667 0.73 0.00 0.00 5.14
2260 2436 2.284405 TCAGACCCTTCCCCGGAC 60.284 66.667 0.73 0.00 0.00 4.79
2261 2437 3.400054 CAGACCCTTCCCCGGACC 61.400 72.222 0.73 0.00 0.00 4.46
2262 2438 4.735599 AGACCCTTCCCCGGACCC 62.736 72.222 0.73 0.00 0.00 4.46
2263 2439 4.735599 GACCCTTCCCCGGACCCT 62.736 72.222 0.73 0.00 0.00 4.34
2264 2440 3.286725 ACCCTTCCCCGGACCCTA 61.287 66.667 0.73 0.00 0.00 3.53
2265 2441 2.767073 CCCTTCCCCGGACCCTAC 60.767 72.222 0.73 0.00 0.00 3.18
2266 2442 3.152400 CCTTCCCCGGACCCTACG 61.152 72.222 0.73 0.00 0.00 3.51
2267 2443 3.846430 CTTCCCCGGACCCTACGC 61.846 72.222 0.73 0.00 0.00 4.42
2268 2444 4.700448 TTCCCCGGACCCTACGCA 62.700 66.667 0.73 0.00 0.00 5.24
2269 2445 4.700448 TCCCCGGACCCTACGCAA 62.700 66.667 0.73 0.00 0.00 4.85
2271 2447 4.832608 CCCGGACCCTACGCAAGC 62.833 72.222 0.73 0.00 45.62 4.01
2290 2466 2.203070 GGAGCTATGTGCACCGGG 60.203 66.667 15.69 5.03 42.21 5.73
2291 2467 2.897350 GAGCTATGTGCACCGGGC 60.897 66.667 15.69 14.89 45.94 6.13
2292 2468 3.391665 GAGCTATGTGCACCGGGCT 62.392 63.158 21.56 21.56 45.94 5.19
2293 2469 3.204827 GCTATGTGCACCGGGCTG 61.205 66.667 15.69 0.00 45.15 4.85
2294 2470 3.204827 CTATGTGCACCGGGCTGC 61.205 66.667 15.69 8.50 45.15 5.25
2295 2471 4.794648 TATGTGCACCGGGCTGCC 62.795 66.667 15.69 11.05 45.15 4.85
2301 2477 2.917227 CACCGGGCTGCCCTTTTT 60.917 61.111 33.39 13.23 42.67 1.94
2397 2574 6.479990 TGAACTTTATGCTGATTATGGAGACG 59.520 38.462 0.00 0.00 0.00 4.18
2597 2778 9.603921 CATAAATATTGCATCCTGTTTCCTTTT 57.396 29.630 0.00 0.00 0.00 2.27
2697 3041 8.664669 AAACAATTCCACCTATTTCTGGTATT 57.335 30.769 0.00 0.00 35.80 1.89
2698 3042 7.645058 ACAATTCCACCTATTTCTGGTATTG 57.355 36.000 12.09 12.09 44.70 1.90
2714 3059 4.020928 TGGTATTGCGTCTTCCTTGTTCTA 60.021 41.667 0.00 0.00 0.00 2.10
2771 3116 0.238289 GTTCACATCAACTGGGTGCG 59.762 55.000 0.00 0.00 32.69 5.34
2888 3235 0.031178 CAAAGTGGGTGCAGCAAGAC 59.969 55.000 19.06 10.75 0.00 3.01
2892 3239 1.526686 TGGGTGCAGCAAGACACTG 60.527 57.895 19.06 0.00 36.99 3.66
2907 3254 3.755378 AGACACTGACATTTCCTTGCATC 59.245 43.478 0.00 0.00 0.00 3.91
2935 3284 5.505181 ACTTTGTCATCAATAGTCCCTGT 57.495 39.130 0.00 0.00 33.32 4.00
2936 3285 5.248640 ACTTTGTCATCAATAGTCCCTGTG 58.751 41.667 0.00 0.00 33.32 3.66
2941 3298 8.491045 TTGTCATCAATAGTCCCTGTGATATA 57.509 34.615 0.00 0.00 0.00 0.86
2982 3339 2.103153 TTATTCCTCGATCCTGGGCT 57.897 50.000 0.00 0.00 0.00 5.19
3005 3362 6.055231 TCTGACTACATTTTGGTTTGTTCG 57.945 37.500 0.00 0.00 0.00 3.95
3028 3385 5.539048 GTTGTGGCTACTTTCAGTCTTCTA 58.461 41.667 0.64 0.00 0.00 2.10
3029 3386 6.166982 GTTGTGGCTACTTTCAGTCTTCTAT 58.833 40.000 0.64 0.00 0.00 1.98
3089 3446 1.136329 ACTGTGGGTGAAGGGATGCT 61.136 55.000 0.00 0.00 0.00 3.79
3113 3470 1.758936 TATCACTGTCGACATCCCGT 58.241 50.000 20.40 10.67 0.00 5.28
3138 3495 4.163441 TGTTTGAGACAAAGATGGACCA 57.837 40.909 0.00 0.00 34.69 4.02
3155 3512 4.225860 AATGGACGGACCCAGTGA 57.774 55.556 0.00 0.00 39.97 3.41
3172 3529 3.691118 CAGTGATTGTTGTATGGGTGGAG 59.309 47.826 0.00 0.00 0.00 3.86
3217 3574 0.613260 TGTTAAGAGATGGGCGCAGT 59.387 50.000 10.83 0.00 0.00 4.40
3403 3760 2.975489 GAGATCCAGGGATGGCTTTCTA 59.025 50.000 5.35 0.00 34.60 2.10
3468 3825 7.124471 CAGAAGAATCTGTTATGATCTTTGCG 58.876 38.462 0.00 0.00 46.60 4.85
3532 3899 1.367840 GGGAGTGTCGTTGCAGAGT 59.632 57.895 0.00 0.00 0.00 3.24
3584 3956 6.127925 TGTCATATCATGTTTTGGAGTCAAGC 60.128 38.462 0.00 0.00 33.98 4.01
3594 4006 1.806542 TGGAGTCAAGCGCTGAATTTC 59.193 47.619 12.58 5.63 35.22 2.17
3747 4159 3.900966 TTCATCTCTGACCATGGACTG 57.099 47.619 21.47 16.79 0.00 3.51
3857 4269 1.078848 CTTCCTGGGAGCTTGACCG 60.079 63.158 0.00 0.00 0.00 4.79
3878 4290 3.797546 GCACTGCCTTCTGCGCTC 61.798 66.667 9.73 0.00 45.60 5.03
3879 4291 2.047465 CACTGCCTTCTGCGCTCT 60.047 61.111 9.73 0.00 45.60 4.09
3983 4396 0.189822 AGAGATACTGGCCCTCCCTC 59.810 60.000 0.00 0.38 0.00 4.30
4029 4442 1.598130 GCCTGGCACTCGACAACTT 60.598 57.895 15.17 0.00 0.00 2.66
4058 4471 0.035820 ATCCCTTCAGGCGCGTTTTA 60.036 50.000 8.43 0.00 34.51 1.52
4068 4481 2.551032 AGGCGCGTTTTAGCTAAACTTT 59.449 40.909 18.45 0.00 43.21 2.66
4110 4523 0.676782 AAGGTGGAATTCCCGCTTCG 60.677 55.000 21.90 0.00 44.83 3.79
4212 4625 1.517257 CGCGTCGAGATTTGGCTCT 60.517 57.895 0.00 0.00 32.71 4.09
4238 4651 3.428045 GCGAGCTCAAATGCAAATACCTT 60.428 43.478 15.40 0.00 34.99 3.50
4239 4652 4.201910 GCGAGCTCAAATGCAAATACCTTA 60.202 41.667 15.40 0.00 34.99 2.69
4345 4758 1.137675 CAAGATCCGTGCCTCTCATCA 59.862 52.381 0.00 0.00 0.00 3.07
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 1.205893 GCTCCAGATTCGGTTGAGAGT 59.794 52.381 0.00 0.00 0.00 3.24
5 6 1.800655 CGCTCCAGATTCGGTTGAGAG 60.801 57.143 0.00 0.00 0.00 3.20
6 7 0.173481 CGCTCCAGATTCGGTTGAGA 59.827 55.000 0.00 0.00 0.00 3.27
7 8 1.424493 GCGCTCCAGATTCGGTTGAG 61.424 60.000 0.00 0.00 0.00 3.02
8 9 1.447838 GCGCTCCAGATTCGGTTGA 60.448 57.895 0.00 0.00 0.00 3.18
9 10 1.298157 TTGCGCTCCAGATTCGGTTG 61.298 55.000 9.73 0.00 0.00 3.77
10 11 1.003839 TTGCGCTCCAGATTCGGTT 60.004 52.632 9.73 0.00 0.00 4.44
11 12 1.741770 GTTGCGCTCCAGATTCGGT 60.742 57.895 9.73 0.00 0.00 4.69
12 13 2.464459 GGTTGCGCTCCAGATTCGG 61.464 63.158 9.73 0.00 0.00 4.30
13 14 1.741401 TGGTTGCGCTCCAGATTCG 60.741 57.895 18.00 0.00 0.00 3.34
14 15 4.301505 TGGTTGCGCTCCAGATTC 57.698 55.556 18.00 0.00 0.00 2.52
19 20 4.020617 CTCCCTGGTTGCGCTCCA 62.021 66.667 19.97 19.97 0.00 3.86
20 21 4.785453 CCTCCCTGGTTGCGCTCC 62.785 72.222 9.73 12.17 0.00 4.70
21 22 3.672295 CTCCTCCCTGGTTGCGCTC 62.672 68.421 9.73 1.18 37.07 5.03
22 23 3.710722 CTCCTCCCTGGTTGCGCT 61.711 66.667 9.73 0.00 37.07 5.92
23 24 3.672295 CTCTCCTCCCTGGTTGCGC 62.672 68.421 0.00 0.00 37.07 6.09
24 25 2.581354 CTCTCCTCCCTGGTTGCG 59.419 66.667 0.00 0.00 37.07 4.85
25 26 2.674220 CCCTCTCCTCCCTGGTTGC 61.674 68.421 0.00 0.00 37.07 4.17
26 27 0.980231 CTCCCTCTCCTCCCTGGTTG 60.980 65.000 0.00 0.00 37.07 3.77
27 28 1.156322 TCTCCCTCTCCTCCCTGGTT 61.156 60.000 0.00 0.00 37.07 3.67
28 29 1.156322 TTCTCCCTCTCCTCCCTGGT 61.156 60.000 0.00 0.00 37.07 4.00
29 30 0.398381 CTTCTCCCTCTCCTCCCTGG 60.398 65.000 0.00 0.00 37.10 4.45
30 31 0.633921 TCTTCTCCCTCTCCTCCCTG 59.366 60.000 0.00 0.00 0.00 4.45
31 32 0.933700 CTCTTCTCCCTCTCCTCCCT 59.066 60.000 0.00 0.00 0.00 4.20
32 33 0.105709 CCTCTTCTCCCTCTCCTCCC 60.106 65.000 0.00 0.00 0.00 4.30
33 34 0.634465 ACCTCTTCTCCCTCTCCTCC 59.366 60.000 0.00 0.00 0.00 4.30
34 35 1.775385 CACCTCTTCTCCCTCTCCTC 58.225 60.000 0.00 0.00 0.00 3.71
35 36 0.325203 GCACCTCTTCTCCCTCTCCT 60.325 60.000 0.00 0.00 0.00 3.69
36 37 1.334384 GGCACCTCTTCTCCCTCTCC 61.334 65.000 0.00 0.00 0.00 3.71
37 38 1.671901 CGGCACCTCTTCTCCCTCTC 61.672 65.000 0.00 0.00 0.00 3.20
38 39 1.684049 CGGCACCTCTTCTCCCTCT 60.684 63.158 0.00 0.00 0.00 3.69
39 40 2.726351 CCGGCACCTCTTCTCCCTC 61.726 68.421 0.00 0.00 0.00 4.30
40 41 2.685380 CCGGCACCTCTTCTCCCT 60.685 66.667 0.00 0.00 0.00 4.20
41 42 3.787001 CCCGGCACCTCTTCTCCC 61.787 72.222 0.00 0.00 0.00 4.30
42 43 3.787001 CCCCGGCACCTCTTCTCC 61.787 72.222 0.00 0.00 0.00 3.71
43 44 2.125766 AAACCCCGGCACCTCTTCTC 62.126 60.000 0.00 0.00 0.00 2.87
44 45 0.838987 TAAACCCCGGCACCTCTTCT 60.839 55.000 0.00 0.00 0.00 2.85
45 46 0.675837 GTAAACCCCGGCACCTCTTC 60.676 60.000 0.00 0.00 0.00 2.87
46 47 1.377612 GTAAACCCCGGCACCTCTT 59.622 57.895 0.00 0.00 0.00 2.85
47 48 2.599757 GGTAAACCCCGGCACCTCT 61.600 63.158 0.00 0.00 0.00 3.69
48 49 2.045634 GGTAAACCCCGGCACCTC 60.046 66.667 0.00 0.00 0.00 3.85
49 50 2.530916 AGGTAAACCCCGGCACCT 60.531 61.111 0.00 0.00 36.56 4.00
50 51 2.045634 GAGGTAAACCCCGGCACC 60.046 66.667 0.00 0.00 36.42 5.01
51 52 2.045634 GGAGGTAAACCCCGGCAC 60.046 66.667 0.00 0.00 36.42 5.01
52 53 3.708544 CGGAGGTAAACCCCGGCA 61.709 66.667 16.71 0.00 42.38 5.69
54 55 4.478371 GGCGGAGGTAAACCCCGG 62.478 72.222 22.37 0.00 44.58 5.73
55 56 3.396570 AGGCGGAGGTAAACCCCG 61.397 66.667 18.96 18.96 46.06 5.73
56 57 1.266867 TACAGGCGGAGGTAAACCCC 61.267 60.000 0.00 0.00 36.42 4.95
57 58 0.177373 CTACAGGCGGAGGTAAACCC 59.823 60.000 0.00 0.00 36.42 4.11
58 59 0.461516 GCTACAGGCGGAGGTAAACC 60.462 60.000 0.00 0.00 0.00 3.27
59 60 0.461516 GGCTACAGGCGGAGGTAAAC 60.462 60.000 0.00 0.00 42.94 2.01
60 61 1.902556 GGCTACAGGCGGAGGTAAA 59.097 57.895 0.00 0.00 42.94 2.01
61 62 3.625099 GGCTACAGGCGGAGGTAA 58.375 61.111 0.00 0.00 42.94 2.85
69 70 2.184579 GAGTCACCGGCTACAGGC 59.815 66.667 0.00 0.00 40.90 4.85
70 71 1.215647 GTGAGTCACCGGCTACAGG 59.784 63.158 12.54 0.00 0.00 4.00
71 72 1.215647 GGTGAGTCACCGGCTACAG 59.784 63.158 26.12 0.00 44.95 2.74
72 73 3.373226 GGTGAGTCACCGGCTACA 58.627 61.111 26.12 0.00 44.95 2.74
111 112 4.368808 CACGCGAAGTTGCCGGTG 62.369 66.667 15.93 0.00 0.00 4.94
115 116 2.746277 ATCCCACGCGAAGTTGCC 60.746 61.111 15.93 0.00 0.00 4.52
116 117 2.750888 GGATCCCACGCGAAGTTGC 61.751 63.158 15.93 0.00 0.00 4.17
117 118 1.375396 TGGATCCCACGCGAAGTTG 60.375 57.895 15.93 0.00 0.00 3.16
118 119 1.375523 GTGGATCCCACGCGAAGTT 60.376 57.895 15.93 0.00 44.95 2.66
119 120 2.264794 GTGGATCCCACGCGAAGT 59.735 61.111 15.93 0.00 44.95 3.01
127 128 1.195442 TACTGCGGTTGTGGATCCCA 61.195 55.000 9.90 3.88 0.00 4.37
128 129 0.743345 GTACTGCGGTTGTGGATCCC 60.743 60.000 9.90 0.85 0.00 3.85
129 130 0.743345 GGTACTGCGGTTGTGGATCC 60.743 60.000 1.99 4.20 0.00 3.36
130 131 0.249398 AGGTACTGCGGTTGTGGATC 59.751 55.000 1.99 0.00 37.18 3.36
131 132 0.249398 GAGGTACTGCGGTTGTGGAT 59.751 55.000 1.99 0.00 41.55 3.41
132 133 1.669440 GAGGTACTGCGGTTGTGGA 59.331 57.895 1.99 0.00 41.55 4.02
133 134 1.736645 CGAGGTACTGCGGTTGTGG 60.737 63.158 1.99 0.00 41.55 4.17
134 135 2.380410 GCGAGGTACTGCGGTTGTG 61.380 63.158 1.99 0.00 41.55 3.33
135 136 2.048503 GCGAGGTACTGCGGTTGT 60.049 61.111 1.99 0.00 41.55 3.32
136 137 3.179265 CGCGAGGTACTGCGGTTG 61.179 66.667 1.99 0.00 46.35 3.77
141 142 2.576317 GACGACGCGAGGTACTGC 60.576 66.667 15.93 0.00 41.55 4.40
142 143 2.276493 CGACGACGCGAGGTACTG 60.276 66.667 15.93 0.00 41.55 2.74
143 144 2.740055 ACGACGACGCGAGGTACT 60.740 61.111 15.93 0.00 43.27 2.73
144 145 2.572647 CACGACGACGCGAGGTAC 60.573 66.667 15.93 3.68 43.96 3.34
145 146 3.015293 GACACGACGACGCGAGGTA 62.015 63.158 15.93 0.00 43.96 3.08
146 147 4.380628 GACACGACGACGCGAGGT 62.381 66.667 15.93 10.29 43.96 3.85
148 149 4.714555 ACGACACGACGACGCGAG 62.715 66.667 15.93 9.24 43.96 5.03
149 150 4.297891 AACGACACGACGACGCGA 62.298 61.111 15.93 0.00 43.96 5.87
150 151 4.087079 CAACGACACGACGACGCG 62.087 66.667 3.53 3.53 43.96 6.01
151 152 4.390584 GCAACGACACGACGACGC 62.391 66.667 7.30 6.35 43.96 5.19
152 153 1.386293 CTAGCAACGACACGACGACG 61.386 60.000 5.58 5.58 45.75 5.12
153 154 0.110509 TCTAGCAACGACACGACGAC 60.111 55.000 0.00 0.00 37.03 4.34
154 155 0.165295 CTCTAGCAACGACACGACGA 59.835 55.000 0.00 0.00 37.03 4.20
155 156 0.793478 CCTCTAGCAACGACACGACG 60.793 60.000 0.00 0.00 39.31 5.12
156 157 0.520404 TCCTCTAGCAACGACACGAC 59.480 55.000 0.00 0.00 0.00 4.34
157 158 0.803117 CTCCTCTAGCAACGACACGA 59.197 55.000 0.00 0.00 0.00 4.35
158 159 0.803117 TCTCCTCTAGCAACGACACG 59.197 55.000 0.00 0.00 0.00 4.49
159 160 1.133407 CCTCTCCTCTAGCAACGACAC 59.867 57.143 0.00 0.00 0.00 3.67
160 161 1.464734 CCTCTCCTCTAGCAACGACA 58.535 55.000 0.00 0.00 0.00 4.35
161 162 0.741915 CCCTCTCCTCTAGCAACGAC 59.258 60.000 0.00 0.00 0.00 4.34
162 163 1.038130 GCCCTCTCCTCTAGCAACGA 61.038 60.000 0.00 0.00 0.00 3.85
163 164 1.439644 GCCCTCTCCTCTAGCAACG 59.560 63.158 0.00 0.00 0.00 4.10
164 165 1.439644 CGCCCTCTCCTCTAGCAAC 59.560 63.158 0.00 0.00 0.00 4.17
165 166 1.758514 CCGCCCTCTCCTCTAGCAA 60.759 63.158 0.00 0.00 0.00 3.91
166 167 2.123683 CCGCCCTCTCCTCTAGCA 60.124 66.667 0.00 0.00 0.00 3.49
167 168 1.901464 CTCCGCCCTCTCCTCTAGC 60.901 68.421 0.00 0.00 0.00 3.42
168 169 0.250727 CTCTCCGCCCTCTCCTCTAG 60.251 65.000 0.00 0.00 0.00 2.43
169 170 1.710996 CCTCTCCGCCCTCTCCTCTA 61.711 65.000 0.00 0.00 0.00 2.43
170 171 2.600731 CTCTCCGCCCTCTCCTCT 59.399 66.667 0.00 0.00 0.00 3.69
171 172 2.520741 CCTCTCCGCCCTCTCCTC 60.521 72.222 0.00 0.00 0.00 3.71
172 173 2.581726 CTTCCTCTCCGCCCTCTCCT 62.582 65.000 0.00 0.00 0.00 3.69
173 174 2.042843 TTCCTCTCCGCCCTCTCC 60.043 66.667 0.00 0.00 0.00 3.71
174 175 2.131067 CCTTCCTCTCCGCCCTCTC 61.131 68.421 0.00 0.00 0.00 3.20
175 176 2.042435 CCTTCCTCTCCGCCCTCT 60.042 66.667 0.00 0.00 0.00 3.69
176 177 2.042843 TCCTTCCTCTCCGCCCTC 60.043 66.667 0.00 0.00 0.00 4.30
177 178 2.042435 CTCCTTCCTCTCCGCCCT 60.042 66.667 0.00 0.00 0.00 5.19
178 179 1.962321 GAACTCCTTCCTCTCCGCCC 61.962 65.000 0.00 0.00 0.00 6.13
179 180 1.518302 GAACTCCTTCCTCTCCGCC 59.482 63.158 0.00 0.00 0.00 6.13
180 181 1.139947 CGAACTCCTTCCTCTCCGC 59.860 63.158 0.00 0.00 0.00 5.54
181 182 1.174783 TTCGAACTCCTTCCTCTCCG 58.825 55.000 0.00 0.00 0.00 4.63
182 183 3.526534 CATTTCGAACTCCTTCCTCTCC 58.473 50.000 0.00 0.00 0.00 3.71
183 184 3.195825 TCCATTTCGAACTCCTTCCTCTC 59.804 47.826 0.00 0.00 0.00 3.20
184 185 3.173965 TCCATTTCGAACTCCTTCCTCT 58.826 45.455 0.00 0.00 0.00 3.69
185 186 3.611766 TCCATTTCGAACTCCTTCCTC 57.388 47.619 0.00 0.00 0.00 3.71
186 187 4.327680 CTTTCCATTTCGAACTCCTTCCT 58.672 43.478 0.00 0.00 0.00 3.36
187 188 3.440522 CCTTTCCATTTCGAACTCCTTCC 59.559 47.826 0.00 0.00 0.00 3.46
188 189 3.440522 CCCTTTCCATTTCGAACTCCTTC 59.559 47.826 0.00 0.00 0.00 3.46
189 190 3.421844 CCCTTTCCATTTCGAACTCCTT 58.578 45.455 0.00 0.00 0.00 3.36
190 191 2.290960 CCCCTTTCCATTTCGAACTCCT 60.291 50.000 0.00 0.00 0.00 3.69
191 192 2.092323 CCCCTTTCCATTTCGAACTCC 58.908 52.381 0.00 0.00 0.00 3.85
192 193 3.067684 TCCCCTTTCCATTTCGAACTC 57.932 47.619 0.00 0.00 0.00 3.01
193 194 3.739401 ATCCCCTTTCCATTTCGAACT 57.261 42.857 0.00 0.00 0.00 3.01
194 195 3.181500 CGAATCCCCTTTCCATTTCGAAC 60.181 47.826 0.00 0.00 38.49 3.95
195 196 3.013921 CGAATCCCCTTTCCATTTCGAA 58.986 45.455 0.00 0.00 38.49 3.71
196 197 2.639065 CGAATCCCCTTTCCATTTCGA 58.361 47.619 0.00 0.00 38.49 3.71
197 198 1.676006 CCGAATCCCCTTTCCATTTCG 59.324 52.381 0.00 0.00 36.60 3.46
198 199 2.031870 CCCGAATCCCCTTTCCATTTC 58.968 52.381 0.00 0.00 0.00 2.17
199 200 1.361197 ACCCGAATCCCCTTTCCATTT 59.639 47.619 0.00 0.00 0.00 2.32
200 201 1.007607 ACCCGAATCCCCTTTCCATT 58.992 50.000 0.00 0.00 0.00 3.16
201 202 0.258774 CACCCGAATCCCCTTTCCAT 59.741 55.000 0.00 0.00 0.00 3.41
202 203 0.842905 TCACCCGAATCCCCTTTCCA 60.843 55.000 0.00 0.00 0.00 3.53
203 204 0.551396 ATCACCCGAATCCCCTTTCC 59.449 55.000 0.00 0.00 0.00 3.13
204 205 1.680338 CATCACCCGAATCCCCTTTC 58.320 55.000 0.00 0.00 0.00 2.62
205 206 0.258774 CCATCACCCGAATCCCCTTT 59.741 55.000 0.00 0.00 0.00 3.11
206 207 1.922821 CCATCACCCGAATCCCCTT 59.077 57.895 0.00 0.00 0.00 3.95
207 208 2.757124 GCCATCACCCGAATCCCCT 61.757 63.158 0.00 0.00 0.00 4.79
208 209 2.203351 GCCATCACCCGAATCCCC 60.203 66.667 0.00 0.00 0.00 4.81
209 210 2.591715 CGCCATCACCCGAATCCC 60.592 66.667 0.00 0.00 0.00 3.85
210 211 3.279875 GCGCCATCACCCGAATCC 61.280 66.667 0.00 0.00 0.00 3.01
211 212 2.513666 TGCGCCATCACCCGAATC 60.514 61.111 4.18 0.00 0.00 2.52
212 213 2.514592 CTGCGCCATCACCCGAAT 60.515 61.111 4.18 0.00 0.00 3.34
213 214 3.545124 AACTGCGCCATCACCCGAA 62.545 57.895 4.18 0.00 0.00 4.30
214 215 3.545124 AAACTGCGCCATCACCCGA 62.545 57.895 4.18 0.00 0.00 5.14
215 216 3.039202 GAAACTGCGCCATCACCCG 62.039 63.158 4.18 0.00 0.00 5.28
216 217 2.877691 GAAACTGCGCCATCACCC 59.122 61.111 4.18 0.00 0.00 4.61
217 218 1.573829 TTCGAAACTGCGCCATCACC 61.574 55.000 4.18 0.00 0.00 4.02
218 219 0.447801 ATTCGAAACTGCGCCATCAC 59.552 50.000 4.18 0.00 0.00 3.06
219 220 1.933181 CTATTCGAAACTGCGCCATCA 59.067 47.619 4.18 0.00 0.00 3.07
220 221 1.261619 CCTATTCGAAACTGCGCCATC 59.738 52.381 4.18 0.00 0.00 3.51
221 222 1.134521 TCCTATTCGAAACTGCGCCAT 60.135 47.619 4.18 0.00 0.00 4.40
222 223 0.248012 TCCTATTCGAAACTGCGCCA 59.752 50.000 4.18 0.00 0.00 5.69
223 224 0.931005 CTCCTATTCGAAACTGCGCC 59.069 55.000 4.18 0.00 0.00 6.53
224 225 1.922570 TCTCCTATTCGAAACTGCGC 58.077 50.000 0.00 0.00 0.00 6.09
225 226 2.282820 GCTTCTCCTATTCGAAACTGCG 59.717 50.000 0.00 0.00 0.00 5.18
226 227 2.282820 CGCTTCTCCTATTCGAAACTGC 59.717 50.000 0.00 0.00 0.00 4.40
227 228 2.860735 CCGCTTCTCCTATTCGAAACTG 59.139 50.000 0.00 0.00 0.00 3.16
228 229 2.159085 CCCGCTTCTCCTATTCGAAACT 60.159 50.000 0.00 0.00 0.00 2.66
229 230 2.202566 CCCGCTTCTCCTATTCGAAAC 58.797 52.381 0.00 0.00 0.00 2.78
230 231 1.472728 GCCCGCTTCTCCTATTCGAAA 60.473 52.381 0.00 0.00 0.00 3.46
231 232 0.104304 GCCCGCTTCTCCTATTCGAA 59.896 55.000 0.00 0.00 0.00 3.71
232 233 1.740285 GCCCGCTTCTCCTATTCGA 59.260 57.895 0.00 0.00 0.00 3.71
233 234 1.661821 CGCCCGCTTCTCCTATTCG 60.662 63.158 0.00 0.00 0.00 3.34
234 235 1.301009 CCGCCCGCTTCTCCTATTC 60.301 63.158 0.00 0.00 0.00 1.75
235 236 2.064581 ACCGCCCGCTTCTCCTATT 61.065 57.895 0.00 0.00 0.00 1.73
236 237 2.444140 ACCGCCCGCTTCTCCTAT 60.444 61.111 0.00 0.00 0.00 2.57
237 238 3.458163 CACCGCCCGCTTCTCCTA 61.458 66.667 0.00 0.00 0.00 2.94
248 249 3.670377 GAAACTGCCCACACCGCC 61.670 66.667 0.00 0.00 0.00 6.13
249 250 4.025401 CGAAACTGCCCACACCGC 62.025 66.667 0.00 0.00 0.00 5.68
250 251 4.025401 GCGAAACTGCCCACACCG 62.025 66.667 0.00 0.00 0.00 4.94
258 259 2.917343 GCTTTAATTCAGGCGAAACTGC 59.083 45.455 0.00 0.00 38.36 4.40
259 260 4.159377 TGCTTTAATTCAGGCGAAACTG 57.841 40.909 0.00 0.00 39.84 3.16
260 261 3.366374 GCTGCTTTAATTCAGGCGAAACT 60.366 43.478 0.00 0.00 34.01 2.66
261 262 2.917343 GCTGCTTTAATTCAGGCGAAAC 59.083 45.455 0.00 0.00 34.01 2.78
262 263 2.094752 GGCTGCTTTAATTCAGGCGAAA 60.095 45.455 12.84 0.00 44.08 3.46
263 264 1.472480 GGCTGCTTTAATTCAGGCGAA 59.528 47.619 12.84 0.00 44.08 4.70
264 265 1.094785 GGCTGCTTTAATTCAGGCGA 58.905 50.000 12.84 0.00 44.08 5.54
265 266 3.629858 GGCTGCTTTAATTCAGGCG 57.370 52.632 12.84 0.00 44.08 5.52
267 268 1.753073 CCCAGGCTGCTTTAATTCAGG 59.247 52.381 9.56 0.00 0.00 3.86
268 269 1.135721 GCCCAGGCTGCTTTAATTCAG 59.864 52.381 9.56 1.36 38.26 3.02
269 270 1.185315 GCCCAGGCTGCTTTAATTCA 58.815 50.000 9.56 0.00 38.26 2.57
270 271 0.461548 GGCCCAGGCTGCTTTAATTC 59.538 55.000 9.56 0.00 41.60 2.17
271 272 0.977627 GGGCCCAGGCTGCTTTAATT 60.978 55.000 19.95 0.00 41.60 1.40
272 273 1.381735 GGGCCCAGGCTGCTTTAAT 60.382 57.895 19.95 0.00 41.60 1.40
273 274 2.037208 GGGCCCAGGCTGCTTTAA 59.963 61.111 19.95 0.00 41.60 1.52
274 275 3.264052 TGGGCCCAGGCTGCTTTA 61.264 61.111 24.45 0.00 41.60 1.85
301 302 3.627218 GGATAAGGCGCGACGTGC 61.627 66.667 24.61 24.61 41.47 5.34
302 303 2.960129 GGGATAAGGCGCGACGTG 60.960 66.667 11.76 3.50 0.00 4.49
303 304 4.564116 CGGGATAAGGCGCGACGT 62.564 66.667 12.10 8.51 45.63 4.34
304 305 2.666715 TTACGGGATAAGGCGCGACG 62.667 60.000 12.10 2.74 45.63 5.12
305 306 1.066257 TTACGGGATAAGGCGCGAC 59.934 57.895 12.10 7.34 45.63 5.19
306 307 1.066257 GTTACGGGATAAGGCGCGA 59.934 57.895 12.10 0.00 45.63 5.87
308 309 1.952635 CCGTTACGGGATAAGGCGC 60.953 63.158 17.00 0.00 44.15 6.53
309 310 4.331356 CCGTTACGGGATAAGGCG 57.669 61.111 17.00 0.00 44.15 5.52
319 320 2.807895 CGACCAGGTGCCGTTACG 60.808 66.667 0.00 0.00 0.00 3.18
320 321 2.433664 CCGACCAGGTGCCGTTAC 60.434 66.667 0.00 0.00 34.51 2.50
321 322 3.697747 CCCGACCAGGTGCCGTTA 61.698 66.667 0.00 0.00 38.74 3.18
350 351 4.965858 CTCGATCGCTCCGACCGC 62.966 72.222 11.09 0.00 43.16 5.68
351 352 4.965858 GCTCGATCGCTCCGACCG 62.966 72.222 11.09 0.00 45.01 4.79
352 353 4.965858 CGCTCGATCGCTCCGACC 62.966 72.222 11.09 0.00 39.18 4.79
365 366 2.332362 TTAGACCGTCCGATGCGCTC 62.332 60.000 9.73 2.56 0.00 5.03
366 367 2.337749 CTTAGACCGTCCGATGCGCT 62.338 60.000 9.73 0.00 0.00 5.92
367 368 1.944676 CTTAGACCGTCCGATGCGC 60.945 63.158 0.00 0.00 0.00 6.09
368 369 1.944676 GCTTAGACCGTCCGATGCG 60.945 63.158 0.00 0.00 0.00 4.73
369 370 1.944676 CGCTTAGACCGTCCGATGC 60.945 63.158 0.00 0.00 0.00 3.91
370 371 1.944676 GCGCTTAGACCGTCCGATG 60.945 63.158 0.00 0.00 0.00 3.84
371 372 2.412112 GCGCTTAGACCGTCCGAT 59.588 61.111 0.00 0.00 0.00 4.18
372 373 4.170062 CGCGCTTAGACCGTCCGA 62.170 66.667 5.56 0.00 0.00 4.55
373 374 4.471726 ACGCGCTTAGACCGTCCG 62.472 66.667 5.73 0.00 0.00 4.79
374 375 2.879462 CACGCGCTTAGACCGTCC 60.879 66.667 5.73 0.00 32.18 4.79
375 376 3.542742 GCACGCGCTTAGACCGTC 61.543 66.667 5.73 0.00 32.18 4.79
390 391 4.512961 ATGGATGTCGCGAGCGCA 62.513 61.111 10.24 13.89 42.06 6.09
391 392 3.696426 GATGGATGTCGCGAGCGC 61.696 66.667 10.24 0.00 39.59 5.92
392 393 3.032609 GGATGGATGTCGCGAGCG 61.033 66.667 10.24 11.64 41.35 5.03
393 394 3.032609 CGGATGGATGTCGCGAGC 61.033 66.667 10.24 5.27 0.00 5.03
394 395 2.355126 CCGGATGGATGTCGCGAG 60.355 66.667 10.24 0.00 37.49 5.03
395 396 4.585526 GCCGGATGGATGTCGCGA 62.586 66.667 5.05 3.71 37.49 5.87
396 397 4.889856 TGCCGGATGGATGTCGCG 62.890 66.667 5.05 0.00 37.49 5.87
397 398 3.272334 GTGCCGGATGGATGTCGC 61.272 66.667 5.05 0.00 37.49 5.19
398 399 1.884464 CTGTGCCGGATGGATGTCG 60.884 63.158 5.05 0.00 37.49 4.35
399 400 2.182842 GCTGTGCCGGATGGATGTC 61.183 63.158 5.05 0.00 37.49 3.06
400 401 2.124570 GCTGTGCCGGATGGATGT 60.125 61.111 5.05 0.00 37.49 3.06
401 402 2.184830 CAGCTGTGCCGGATGGATG 61.185 63.158 5.05 0.00 37.49 3.51
402 403 2.191375 CAGCTGTGCCGGATGGAT 59.809 61.111 5.05 0.00 37.49 3.41
403 404 4.783621 GCAGCTGTGCCGGATGGA 62.784 66.667 16.64 0.00 44.72 3.41
415 416 4.256920 CCTAAATACTTCACAGTGCAGCT 58.743 43.478 0.00 0.00 34.06 4.24
416 417 3.375299 CCCTAAATACTTCACAGTGCAGC 59.625 47.826 0.00 0.00 34.06 5.25
417 418 4.631813 GTCCCTAAATACTTCACAGTGCAG 59.368 45.833 0.00 0.00 34.06 4.41
418 419 4.041075 TGTCCCTAAATACTTCACAGTGCA 59.959 41.667 0.00 0.00 34.06 4.57
419 420 4.575885 TGTCCCTAAATACTTCACAGTGC 58.424 43.478 0.00 0.00 34.06 4.40
420 421 7.687941 AAATGTCCCTAAATACTTCACAGTG 57.312 36.000 0.00 0.00 34.06 3.66
421 422 9.975218 AATAAATGTCCCTAAATACTTCACAGT 57.025 29.630 0.00 0.00 36.99 3.55
466 467 9.376075 CATCGAATAGATCCTGTAAAATAGCAT 57.624 33.333 0.00 0.00 37.52 3.79
467 468 8.367911 ACATCGAATAGATCCTGTAAAATAGCA 58.632 33.333 0.00 0.00 37.52 3.49
468 469 8.651588 CACATCGAATAGATCCTGTAAAATAGC 58.348 37.037 0.00 0.00 37.52 2.97
469 470 9.698309 ACACATCGAATAGATCCTGTAAAATAG 57.302 33.333 0.00 0.00 37.52 1.73
471 472 8.964476 AACACATCGAATAGATCCTGTAAAAT 57.036 30.769 0.00 0.00 37.52 1.82
472 473 8.786826 AAACACATCGAATAGATCCTGTAAAA 57.213 30.769 0.00 0.00 37.52 1.52
473 474 8.786826 AAAACACATCGAATAGATCCTGTAAA 57.213 30.769 0.00 0.00 37.52 2.01
474 475 8.786826 AAAAACACATCGAATAGATCCTGTAA 57.213 30.769 0.00 0.00 37.52 2.41
516 517 7.414651 CCACCAAAAATGGTCAAACCTTTAAAC 60.415 37.037 0.00 0.00 40.85 2.01
533 536 1.003580 TGGCAAAGCAACCACCAAAAA 59.996 42.857 0.00 0.00 0.00 1.94
541 544 3.318875 GCGTTTGGCAAAGCAACC 58.681 55.556 13.94 0.00 42.87 3.77
578 581 6.259167 TGCGAATAACCATGAGTACATTTACC 59.741 38.462 0.00 0.00 34.15 2.85
579 582 7.123830 GTGCGAATAACCATGAGTACATTTAC 58.876 38.462 0.00 0.00 34.15 2.01
580 583 6.019398 CGTGCGAATAACCATGAGTACATTTA 60.019 38.462 0.00 0.00 34.15 1.40
581 584 5.220586 CGTGCGAATAACCATGAGTACATTT 60.221 40.000 0.00 0.00 34.15 2.32
582 585 4.270084 CGTGCGAATAACCATGAGTACATT 59.730 41.667 0.00 0.00 34.15 2.71
583 586 3.802139 CGTGCGAATAACCATGAGTACAT 59.198 43.478 0.00 0.00 37.19 2.29
584 587 3.183754 CGTGCGAATAACCATGAGTACA 58.816 45.455 0.00 0.00 0.00 2.90
585 588 2.034001 GCGTGCGAATAACCATGAGTAC 60.034 50.000 0.00 0.00 0.00 2.73
586 589 2.198406 GCGTGCGAATAACCATGAGTA 58.802 47.619 0.00 0.00 0.00 2.59
587 590 1.006832 GCGTGCGAATAACCATGAGT 58.993 50.000 0.00 0.00 0.00 3.41
727 747 4.207281 TTGCGATCTCGAGGCCGG 62.207 66.667 22.10 0.00 43.02 6.13
753 775 0.544357 TCCCGGGTGATCAAGTGAGT 60.544 55.000 22.86 0.00 0.00 3.41
821 843 2.940083 GCAGTTTAGGTACAAGAGGGGC 60.940 54.545 0.00 0.00 0.00 5.80
830 852 4.092968 CACCGAATTCAGCAGTTTAGGTAC 59.907 45.833 6.22 0.00 0.00 3.34
862 890 4.164988 AGAGTTTAACAGATGGAGGGGATG 59.835 45.833 0.00 0.00 0.00 3.51
874 902 5.991606 TGATCACAGGTTGAGAGTTTAACAG 59.008 40.000 0.00 0.00 37.77 3.16
910 939 7.447238 TCATAGATTGGGGATAACCGATTTTTC 59.553 37.037 0.00 0.00 41.60 2.29
1009 1038 1.910580 ATTCCACCCGTCAAGCCGAT 61.911 55.000 0.00 0.00 0.00 4.18
1055 1084 1.819632 CCGGCGGATTTGAAGAGGG 60.820 63.158 24.41 0.00 0.00 4.30
1092 1121 0.035820 TTACCCGAGCCACAATGTCC 60.036 55.000 0.00 0.00 0.00 4.02
1137 1166 4.992951 CACAGCATGATATAGTAGCAGCAA 59.007 41.667 0.00 0.00 39.69 3.91
1138 1167 4.563061 CACAGCATGATATAGTAGCAGCA 58.437 43.478 0.00 0.00 39.69 4.41
1140 1169 3.931468 GGCACAGCATGATATAGTAGCAG 59.069 47.826 0.00 0.00 39.69 4.24
1141 1170 3.580022 AGGCACAGCATGATATAGTAGCA 59.420 43.478 0.00 0.00 39.69 3.49
1142 1171 4.199432 AGGCACAGCATGATATAGTAGC 57.801 45.455 0.00 0.00 39.69 3.58
1143 1172 5.106791 GCAAAGGCACAGCATGATATAGTAG 60.107 44.000 0.00 0.00 41.26 2.57
1144 1173 4.756642 GCAAAGGCACAGCATGATATAGTA 59.243 41.667 0.00 0.00 41.26 1.82
1145 1174 3.567164 GCAAAGGCACAGCATGATATAGT 59.433 43.478 0.00 0.00 41.26 2.12
1146 1175 4.156664 GCAAAGGCACAGCATGATATAG 57.843 45.455 0.00 0.00 41.26 1.31
1382 1450 2.568956 AGTATTGCTGCCAGTTCTCAGA 59.431 45.455 0.00 0.00 32.26 3.27
1400 1468 7.648039 AAAGTCAACACCAAATTACCAAGTA 57.352 32.000 0.00 0.00 0.00 2.24
1432 1503 6.767902 TCATTCCATGCTGTAGAACTTTATCC 59.232 38.462 0.00 0.00 0.00 2.59
1447 1518 3.581024 TTGAGCAGTTTCATTCCATGC 57.419 42.857 0.00 0.00 37.15 4.06
1456 1527 8.642020 CAACATAAAGCTAAATTGAGCAGTTTC 58.358 33.333 17.38 0.00 45.43 2.78
1552 1636 2.021457 CAACAAAACTCCCGGTTCTGT 58.979 47.619 0.00 0.00 40.41 3.41
1559 1643 2.642700 CGCCCAACAAAACTCCCG 59.357 61.111 0.00 0.00 0.00 5.14
1607 1691 8.265055 CACTGAATAACAAAGAAGGAGGGTATA 58.735 37.037 0.00 0.00 0.00 1.47
1608 1692 7.112779 CACTGAATAACAAAGAAGGAGGGTAT 58.887 38.462 0.00 0.00 0.00 2.73
1610 1694 5.316987 CACTGAATAACAAAGAAGGAGGGT 58.683 41.667 0.00 0.00 0.00 4.34
1611 1695 4.156739 GCACTGAATAACAAAGAAGGAGGG 59.843 45.833 0.00 0.00 0.00 4.30
1612 1696 4.142816 CGCACTGAATAACAAAGAAGGAGG 60.143 45.833 0.00 0.00 0.00 4.30
1634 1719 6.317140 CACATGATTTCCCATCCTATAATCCG 59.683 42.308 0.00 0.00 0.00 4.18
1805 1890 4.774124 TCCAATTAGACAGAGAATGCAGG 58.226 43.478 0.00 0.00 0.00 4.85
1940 2108 7.292356 TCAGTTATTATGGTCATACATCACCCT 59.708 37.037 0.00 0.00 32.39 4.34
1946 2114 6.936900 GCCTGTCAGTTATTATGGTCATACAT 59.063 38.462 0.00 0.00 34.90 2.29
1960 2128 4.341235 ACGCTATAATGAGCCTGTCAGTTA 59.659 41.667 0.00 0.00 39.07 2.24
2047 2215 8.631676 TGTTAACAATAAGCAATGCATACATG 57.368 30.769 8.35 5.83 36.36 3.21
2078 2246 9.833179 ACCATTGATTTTTATCATCCCATAGAT 57.167 29.630 0.00 0.00 34.66 1.98
2110 2278 6.429692 CGCATCATACCAGGGATTGTAATAAA 59.570 38.462 0.00 0.00 0.00 1.40
2241 2417 2.284699 CCGGGGAAGGGTCTGACT 60.285 66.667 7.85 0.00 0.00 3.41
2244 2420 3.400054 GGTCCGGGGAAGGGTCTG 61.400 72.222 0.00 0.00 0.00 3.51
2245 2421 4.735599 GGGTCCGGGGAAGGGTCT 62.736 72.222 0.00 0.00 0.00 3.85
2246 2422 3.321901 TAGGGTCCGGGGAAGGGTC 62.322 68.421 0.00 0.00 0.00 4.46
2247 2423 3.286725 TAGGGTCCGGGGAAGGGT 61.287 66.667 0.00 0.00 0.00 4.34
2248 2424 2.767073 GTAGGGTCCGGGGAAGGG 60.767 72.222 0.00 0.00 0.00 3.95
2249 2425 3.152400 CGTAGGGTCCGGGGAAGG 61.152 72.222 0.00 0.00 0.00 3.46
2250 2426 3.846430 GCGTAGGGTCCGGGGAAG 61.846 72.222 0.00 0.00 0.00 3.46
2251 2427 4.700448 TGCGTAGGGTCCGGGGAA 62.700 66.667 0.00 0.00 0.00 3.97
2252 2428 4.700448 TTGCGTAGGGTCCGGGGA 62.700 66.667 0.00 0.00 0.00 4.81
2253 2429 4.157120 CTTGCGTAGGGTCCGGGG 62.157 72.222 0.00 0.00 0.00 5.73
2254 2430 4.832608 GCTTGCGTAGGGTCCGGG 62.833 72.222 0.00 0.00 0.00 5.73
2257 2433 4.832608 CCCGCTTGCGTAGGGTCC 62.833 72.222 13.97 0.00 40.27 4.46
2258 2434 3.718210 CTCCCGCTTGCGTAGGGTC 62.718 68.421 13.97 0.00 45.27 4.46
2259 2435 3.771160 CTCCCGCTTGCGTAGGGT 61.771 66.667 13.97 0.00 45.27 4.34
2261 2437 2.088674 ATAGCTCCCGCTTGCGTAGG 62.089 60.000 13.97 8.87 46.47 3.18
2262 2438 0.941463 CATAGCTCCCGCTTGCGTAG 60.941 60.000 13.97 11.35 46.47 3.51
2263 2439 1.067416 CATAGCTCCCGCTTGCGTA 59.933 57.895 13.97 0.00 46.47 4.42
2264 2440 2.202932 CATAGCTCCCGCTTGCGT 60.203 61.111 13.97 0.00 46.47 5.24
2265 2441 2.202932 ACATAGCTCCCGCTTGCG 60.203 61.111 8.14 8.14 46.47 4.85
2266 2442 2.828128 GCACATAGCTCCCGCTTGC 61.828 63.158 0.00 0.00 46.47 4.01
2267 2443 1.450134 TGCACATAGCTCCCGCTTG 60.450 57.895 0.00 0.00 46.47 4.01
2268 2444 1.450312 GTGCACATAGCTCCCGCTT 60.450 57.895 13.17 0.00 46.47 4.68
2274 2450 2.897350 GCCCGGTGCACATAGCTC 60.897 66.667 20.43 0.00 45.94 4.09
2275 2451 3.402681 AGCCCGGTGCACATAGCT 61.403 61.111 20.43 18.93 45.94 3.32
2276 2452 3.204827 CAGCCCGGTGCACATAGC 61.205 66.667 20.43 16.92 44.83 2.97
2277 2453 3.204827 GCAGCCCGGTGCACATAG 61.205 66.667 20.43 9.17 43.41 2.23
2278 2454 4.794648 GGCAGCCCGGTGCACATA 62.795 66.667 20.43 0.00 45.93 2.29
2327 2503 3.999663 GTCAGTGTCTGGGAGAATTTCAG 59.000 47.826 0.00 0.00 31.51 3.02
2397 2574 5.122239 TCTGCACTACATTCTGTAAATGCAC 59.878 40.000 16.16 0.00 43.84 4.57
2475 2652 6.579666 TCTGTCAATTTCTCCATTTTCCAG 57.420 37.500 0.00 0.00 0.00 3.86
2551 2728 2.037511 TGTTGGTAGGAGTTGTAACGGG 59.962 50.000 0.00 0.00 0.00 5.28
2603 2784 7.673926 TGGATCACATATCTACTAACCATAGCA 59.326 37.037 0.00 0.00 31.96 3.49
2604 2785 8.067751 TGGATCACATATCTACTAACCATAGC 57.932 38.462 0.00 0.00 31.96 2.97
2605 2786 9.249053 ACTGGATCACATATCTACTAACCATAG 57.751 37.037 0.00 0.00 35.14 2.23
2606 2787 9.601810 AACTGGATCACATATCTACTAACCATA 57.398 33.333 0.00 0.00 0.00 2.74
2607 2788 8.497910 AACTGGATCACATATCTACTAACCAT 57.502 34.615 0.00 0.00 0.00 3.55
2697 3041 3.746045 AACTAGAACAAGGAAGACGCA 57.254 42.857 0.00 0.00 0.00 5.24
2698 3042 4.308265 AGAAACTAGAACAAGGAAGACGC 58.692 43.478 0.00 0.00 0.00 5.19
2714 3059 7.669722 TGGAAGTATGGCATTTTTCTAGAAACT 59.330 33.333 17.51 6.16 0.00 2.66
2766 3111 2.273370 TCACTCGAAATCTACGCACC 57.727 50.000 0.00 0.00 0.00 5.01
2771 3116 8.407457 TGTATGAAACATCACTCGAAATCTAC 57.593 34.615 0.00 0.00 31.43 2.59
2879 3226 2.351157 GGAAATGTCAGTGTCTTGCTGC 60.351 50.000 0.00 0.00 34.21 5.25
2888 3235 3.087031 AGGATGCAAGGAAATGTCAGTG 58.913 45.455 0.00 0.00 0.00 3.66
2892 3239 7.573968 AAGTATAAGGATGCAAGGAAATGTC 57.426 36.000 0.00 0.00 0.00 3.06
2907 3254 8.432805 AGGGACTATTGATGACAAAGTATAAGG 58.567 37.037 0.00 0.00 39.54 2.69
2982 3339 5.587043 ACGAACAAACCAAAATGTAGTCAGA 59.413 36.000 0.00 0.00 0.00 3.27
3089 3446 2.098607 GGATGTCGACAGTGATAACCGA 59.901 50.000 24.41 0.00 0.00 4.69
3138 3495 0.991920 AATCACTGGGTCCGTCCATT 59.008 50.000 0.00 0.00 36.05 3.16
3155 3512 2.143876 GGCTCCACCCATACAACAAT 57.856 50.000 0.00 0.00 0.00 2.71
3172 3529 1.734465 CTCTCAATCTGTGTTTCGGGC 59.266 52.381 0.00 0.00 0.00 6.13
3176 3533 3.668447 TGAGCCTCTCAATCTGTGTTTC 58.332 45.455 0.00 0.00 37.57 2.78
3212 3569 0.601046 TGAGCTTGTTCCTCACTGCG 60.601 55.000 0.00 0.00 34.59 5.18
3217 3574 2.224378 CCTGTTCTGAGCTTGTTCCTCA 60.224 50.000 0.00 0.00 37.71 3.86
3361 3718 0.035152 TGCGCTCCTTCCATGTCAAT 60.035 50.000 9.73 0.00 0.00 2.57
3403 3760 1.869754 GCCGTGCACATGACGATAGAT 60.870 52.381 18.64 0.00 39.21 1.98
3468 3825 5.048154 AGTTCAGTCCTAACTTCCTAACGAC 60.048 44.000 0.00 0.00 33.39 4.34
3584 3956 4.911610 ACAAAATTCACTCGAAATTCAGCG 59.088 37.500 0.00 0.00 34.01 5.18
3683 4095 1.234615 CCGGTTGATGCGGTTCTGTT 61.235 55.000 0.00 0.00 0.00 3.16
3686 4098 2.746277 GCCGGTTGATGCGGTTCT 60.746 61.111 1.90 0.00 0.00 3.01
3747 4159 1.878088 CCATGCAGGTAGACATCATGC 59.122 52.381 0.00 0.00 41.90 4.06
3892 4304 3.319198 GGGAGTGGTCCGAAGCCA 61.319 66.667 0.00 0.00 45.05 4.75
3983 4396 1.953686 ACAGTTTGGTGGAAACCATCG 59.046 47.619 0.00 0.00 44.54 3.84
4029 4442 1.195115 CTGAAGGGATCTGGTTCCGA 58.805 55.000 0.00 0.00 36.58 4.55
4058 4471 1.620822 CAGTGGCCCAAAGTTTAGCT 58.379 50.000 0.00 0.00 0.00 3.32
4110 4523 1.301322 GGGCAGCGAGATTAGAGGC 60.301 63.158 0.00 0.00 0.00 4.70
4188 4601 0.806102 CAAATCTCGACGCGGGACAT 60.806 55.000 12.47 0.00 39.91 3.06
4198 4611 0.249073 GCGCTAGAGCCAAATCTCGA 60.249 55.000 7.30 0.00 38.12 4.04
4317 4730 0.179000 GCACGGATCTTGGAGATGGT 59.821 55.000 0.00 0.00 34.53 3.55
4345 4758 7.500559 GCCCAAAGATATGATTCTTGTTACTCT 59.499 37.037 0.00 0.00 36.12 3.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.