Multiple sequence alignment - TraesCS3B01G196200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G196200 chr3B 100.000 3858 0 0 1 3858 222816762 222812905 0.000000e+00 7125.0
1 TraesCS3B01G196200 chr3B 98.732 473 6 0 3386 3858 809422844 809422372 0.000000e+00 841.0
2 TraesCS3B01G196200 chr3B 86.709 474 59 4 3387 3858 595427641 595428112 1.230000e-144 523.0
3 TraesCS3B01G196200 chr3D 92.908 2397 124 29 812 3180 152486511 152484133 0.000000e+00 3443.0
4 TraesCS3B01G196200 chr3D 91.544 745 33 12 1 723 152487493 152486757 0.000000e+00 1000.0
5 TraesCS3B01G196200 chr3D 96.809 94 2 1 736 828 152486616 152486523 5.160000e-34 156.0
6 TraesCS3B01G196200 chr3D 90.909 55 2 3 3238 3292 45931331 45931382 1.920000e-08 71.3
7 TraesCS3B01G196200 chr3A 92.780 1565 71 14 732 2260 178251627 178253185 0.000000e+00 2226.0
8 TraesCS3B01G196200 chr3A 92.598 743 31 15 1 728 178250668 178251401 0.000000e+00 1046.0
9 TraesCS3B01G196200 chr3A 87.982 907 77 15 2299 3186 178253184 178254077 0.000000e+00 1042.0
10 TraesCS3B01G196200 chr4A 99.368 475 3 0 3384 3858 598320701 598321175 0.000000e+00 861.0
11 TraesCS3B01G196200 chr4D 94.670 469 25 0 3390 3858 3292158 3292626 0.000000e+00 728.0
12 TraesCS3B01G196200 chr7A 84.804 204 31 0 3655 3858 694494124 694493921 5.050000e-49 206.0
13 TraesCS3B01G196200 chr4B 97.826 46 0 1 3238 3283 651511590 651511634 1.150000e-10 78.7
14 TraesCS3B01G196200 chr2D 92.727 55 1 3 3238 3292 425742654 425742603 4.130000e-10 76.8
15 TraesCS3B01G196200 chr2D 95.556 45 2 0 3235 3279 35799966 35800010 5.350000e-09 73.1
16 TraesCS3B01G196200 chr2D 91.071 56 2 3 3238 3293 587110459 587110407 5.350000e-09 73.1
17 TraesCS3B01G196200 chr2D 100.000 32 0 0 3419 3450 599397747 599397778 4.160000e-05 60.2
18 TraesCS3B01G196200 chr5A 97.674 43 1 0 3238 3280 485201756 485201714 1.490000e-09 75.0
19 TraesCS3B01G196200 chr5A 89.796 49 2 3 3419 3465 553146577 553146624 4.160000e-05 60.2
20 TraesCS3B01G196200 chr2B 97.674 43 1 0 3238 3280 33942180 33942222 1.490000e-09 75.0
21 TraesCS3B01G196200 chr2B 97.222 36 1 0 3418 3453 426492591 426492556 1.160000e-05 62.1
22 TraesCS3B01G196200 chr2B 87.037 54 5 2 3403 3454 735801848 735801795 4.160000e-05 60.2
23 TraesCS3B01G196200 chr1A 92.593 54 1 3 3239 3292 287305634 287305684 1.490000e-09 75.0
24 TraesCS3B01G196200 chr5D 92.453 53 1 3 3240 3292 491100864 491100913 5.350000e-09 73.1
25 TraesCS3B01G196200 chr1B 94.872 39 2 0 3418 3456 279777028 279777066 1.160000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G196200 chr3B 222812905 222816762 3857 True 7125 7125 100.000000 1 3858 1 chr3B.!!$R1 3857
1 TraesCS3B01G196200 chr3D 152484133 152487493 3360 True 1533 3443 93.753667 1 3180 3 chr3D.!!$R1 3179
2 TraesCS3B01G196200 chr3A 178250668 178254077 3409 False 1438 2226 91.120000 1 3186 3 chr3A.!!$F1 3185

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
372 385 0.317854 GCCGTGGAAGCAGAAAACAC 60.318 55.000 0.00 0.0 0.00 3.32 F
1153 1443 1.152546 GGTGGAAGGGCAAGTGGTT 60.153 57.895 0.00 0.0 0.00 3.67 F
1511 1805 1.013596 TGACTTGCTTGTCACCGTTG 58.986 50.000 7.98 0.0 41.43 4.10 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1250 1540 0.031515 TGCCGAGGATTAGGAGGGAA 60.032 55.0 0.00 0.0 0.00 3.97 R
2320 2619 0.178981 CATGGCAAGGTATCAGGGGG 60.179 60.0 0.00 0.0 0.00 5.40 R
3368 3713 0.029567 CTCGCGGGAGTGACAGTATC 59.970 60.0 20.59 0.0 45.79 2.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
91 92 4.085568 CGGACATCGATAAAGATTGTCGTG 60.086 45.833 0.00 8.75 43.52 4.35
277 290 0.878961 GACGTGAGGTGGTGGTGAAC 60.879 60.000 0.00 0.00 0.00 3.18
370 383 1.285950 GGCCGTGGAAGCAGAAAAC 59.714 57.895 0.00 0.00 0.00 2.43
371 384 1.452145 GGCCGTGGAAGCAGAAAACA 61.452 55.000 0.00 0.00 0.00 2.83
372 385 0.317854 GCCGTGGAAGCAGAAAACAC 60.318 55.000 0.00 0.00 0.00 3.32
391 404 6.680874 AACACTACTACTCGGACTTCATAG 57.319 41.667 0.00 0.00 0.00 2.23
404 420 7.908453 TCGGACTTCATAGATCAGAGTAGATA 58.092 38.462 0.00 0.00 0.00 1.98
417 433 6.800543 TCAGAGTAGATACAAGATCAGCAAC 58.199 40.000 0.00 0.00 0.00 4.17
430 446 6.749923 AGATCAGCAACTGGTAAAGATTTC 57.250 37.500 0.00 0.00 31.51 2.17
431 447 6.479884 AGATCAGCAACTGGTAAAGATTTCT 58.520 36.000 0.00 0.00 31.51 2.52
432 448 7.624549 AGATCAGCAACTGGTAAAGATTTCTA 58.375 34.615 0.00 0.00 31.51 2.10
433 449 7.768120 AGATCAGCAACTGGTAAAGATTTCTAG 59.232 37.037 0.00 0.00 31.51 2.43
434 450 6.769512 TCAGCAACTGGTAAAGATTTCTAGT 58.230 36.000 0.00 0.00 31.51 2.57
435 451 7.903145 TCAGCAACTGGTAAAGATTTCTAGTA 58.097 34.615 0.00 0.00 31.51 1.82
492 510 3.703001 AGAGGTGGTTGTAGAATGTGG 57.297 47.619 0.00 0.00 0.00 4.17
572 590 7.048629 TGTAAGATGCATTTCTTGGACAAAA 57.951 32.000 11.96 0.00 36.63 2.44
623 643 9.918630 AAACAATCTGTACGTATATATACCCAC 57.081 33.333 15.70 13.52 0.00 4.61
649 670 9.330063 CACTCATGTATGTTATGGAATTAGTGT 57.670 33.333 0.00 0.00 0.00 3.55
1060 1350 1.902508 AGGTGATCGCTTCCTCTTCAA 59.097 47.619 6.18 0.00 0.00 2.69
1077 1367 2.764314 AATTCGCCACATCCGCTGC 61.764 57.895 0.00 0.00 0.00 5.25
1153 1443 1.152546 GGTGGAAGGGCAAGTGGTT 60.153 57.895 0.00 0.00 0.00 3.67
1250 1540 1.747444 ATGAACCCACCTCTGACCTT 58.253 50.000 0.00 0.00 0.00 3.50
1283 1575 2.766229 GGCACCCTCTCCCTCTCC 60.766 72.222 0.00 0.00 0.00 3.71
1309 1601 1.460504 GGTTTTCCACCGGAATCTCC 58.539 55.000 9.46 0.00 41.71 3.71
1385 1677 7.614908 TGACAATCGTTAGCGTATCAATAAAC 58.385 34.615 0.00 0.00 39.49 2.01
1390 1682 6.094719 TCGTTAGCGTATCAATAAACAGTGT 58.905 36.000 0.00 0.00 39.49 3.55
1497 1791 5.243507 TGTGCAATTCATGTACCAATGACTT 59.756 36.000 0.00 0.00 43.29 3.01
1498 1792 5.574055 GTGCAATTCATGTACCAATGACTTG 59.426 40.000 16.00 16.00 44.16 3.16
1511 1805 1.013596 TGACTTGCTTGTCACCGTTG 58.986 50.000 7.98 0.00 41.43 4.10
1675 1969 2.309755 TGGAAAAGCATGGGATCAGAGT 59.690 45.455 0.00 0.00 0.00 3.24
1746 2040 4.009675 GCATGTTGATTACCTCCTGAACA 58.990 43.478 0.00 0.00 0.00 3.18
1758 2052 6.980051 ACCTCCTGAACATTATTTTACGTC 57.020 37.500 0.00 0.00 0.00 4.34
1837 2131 4.782019 ACTTGCTCTCTCTACTTCTGTG 57.218 45.455 0.00 0.00 0.00 3.66
1853 2147 1.129251 CTGTGTCTGCAATGGCGTAAG 59.871 52.381 0.00 0.00 45.35 2.34
1946 2240 6.502158 ACCTTATATGGAATCCTGAAGGGTAG 59.498 42.308 18.99 2.44 36.99 3.18
2123 2417 6.726230 CCATCTTGAGTGCTTCATTATCAAG 58.274 40.000 6.86 6.86 45.21 3.02
2125 2419 7.148120 CCATCTTGAGTGCTTCATTATCAAGTT 60.148 37.037 11.69 2.94 44.53 2.66
2196 2491 4.578928 GGTAACCGATGTATGGATGCTTTT 59.421 41.667 0.00 0.00 0.00 2.27
2206 2501 9.415544 GATGTATGGATGCTTTTTCATATTTCC 57.584 33.333 0.00 0.00 0.00 3.13
2319 2618 7.333528 ACTTTCTGCTTGTTCAGATTTGTAA 57.666 32.000 0.00 0.00 42.12 2.41
2320 2619 7.196331 ACTTTCTGCTTGTTCAGATTTGTAAC 58.804 34.615 0.00 0.00 42.12 2.50
2399 2698 3.722147 ACAGTATCGAGGCTGCTATTTG 58.278 45.455 16.04 0.00 36.26 2.32
2424 2725 6.204882 GTGTTTTTGCTATCTGTTCCTGTACT 59.795 38.462 0.00 0.00 0.00 2.73
2425 2726 6.426937 TGTTTTTGCTATCTGTTCCTGTACTC 59.573 38.462 0.00 0.00 0.00 2.59
2426 2727 6.360370 TTTTGCTATCTGTTCCTGTACTCT 57.640 37.500 0.00 0.00 0.00 3.24
2427 2728 6.360370 TTTGCTATCTGTTCCTGTACTCTT 57.640 37.500 0.00 0.00 0.00 2.85
2428 2729 6.360370 TTGCTATCTGTTCCTGTACTCTTT 57.640 37.500 0.00 0.00 0.00 2.52
2429 2730 6.360370 TGCTATCTGTTCCTGTACTCTTTT 57.640 37.500 0.00 0.00 0.00 2.27
2430 2731 6.769512 TGCTATCTGTTCCTGTACTCTTTTT 58.230 36.000 0.00 0.00 0.00 1.94
2451 2752 5.888691 TTTTTGCGATAACTATTCCTGCA 57.111 34.783 0.00 0.00 0.00 4.41
2452 2753 4.875544 TTTGCGATAACTATTCCTGCAC 57.124 40.909 0.00 0.00 0.00 4.57
2490 2821 6.442541 TCCTAACAATTGTCCCTACTTCAA 57.557 37.500 12.39 0.00 0.00 2.69
2599 2930 5.244402 ACTTTCCAGAATGCATGTCAATTGA 59.756 36.000 3.38 3.38 31.97 2.57
2662 2993 0.108585 TGCAAGTTGACTCACCCTCC 59.891 55.000 7.16 0.00 0.00 4.30
2703 3034 4.098807 GTCAAGGTGAGGTCTCCTATCTTC 59.901 50.000 1.05 0.00 38.77 2.87
2773 3104 8.805688 CATGCTCATACGAATTGACTGATATAG 58.194 37.037 0.00 0.00 0.00 1.31
2824 3155 3.437049 GTGATGCTGGTTTGGTAAGAGAC 59.563 47.826 0.00 0.00 0.00 3.36
2853 3184 1.103803 GCAGTACCCGATGAGACTCA 58.896 55.000 7.80 7.80 0.00 3.41
2873 3204 6.435164 ACTCATTAAATCCCTATGGCTGTTT 58.565 36.000 0.00 0.00 0.00 2.83
2905 3236 3.432046 CCTGCTTGGTTTTGGTGAACATT 60.432 43.478 0.00 0.00 0.00 2.71
2909 3240 4.633565 GCTTGGTTTTGGTGAACATTTGAA 59.366 37.500 0.00 0.00 0.00 2.69
2911 3242 6.511605 GCTTGGTTTTGGTGAACATTTGAATC 60.512 38.462 0.00 0.00 0.00 2.52
2912 3243 5.046529 TGGTTTTGGTGAACATTTGAATCG 58.953 37.500 0.00 0.00 0.00 3.34
2923 3254 6.095300 TGAACATTTGAATCGTATGGCTTCAT 59.905 34.615 2.88 0.00 35.02 2.57
2924 3255 5.824429 ACATTTGAATCGTATGGCTTCATG 58.176 37.500 0.00 0.00 32.59 3.07
2932 3263 4.883083 TCGTATGGCTTCATGGTAGAATC 58.117 43.478 0.00 0.00 32.59 2.52
2946 3278 9.354673 TCATGGTAGAATCTTCAGTTTCTTTTT 57.645 29.630 5.64 0.00 36.07 1.94
2947 3279 9.403110 CATGGTAGAATCTTCAGTTTCTTTTTG 57.597 33.333 5.64 0.00 36.07 2.44
2948 3280 8.746052 TGGTAGAATCTTCAGTTTCTTTTTGA 57.254 30.769 5.64 0.00 36.07 2.69
2949 3281 9.354673 TGGTAGAATCTTCAGTTTCTTTTTGAT 57.645 29.630 5.64 0.00 36.07 2.57
2959 3291 7.195646 TCAGTTTCTTTTTGATGTTGTAGCAG 58.804 34.615 0.00 0.00 0.00 4.24
2966 3298 5.947228 TTTGATGTTGTAGCAGAAGGAAG 57.053 39.130 0.00 0.00 0.00 3.46
2973 3305 4.142609 TGTAGCAGAAGGAAGCCTAATG 57.857 45.455 0.00 0.00 31.13 1.90
2978 3310 4.471386 AGCAGAAGGAAGCCTAATGTTCTA 59.529 41.667 0.00 0.00 31.13 2.10
2984 3316 6.582929 AGGAAGCCTAATGTTCTATTCCTT 57.417 37.500 0.00 0.00 41.69 3.36
3019 3351 1.621317 TGTAACTTGCGTCTCCATCCA 59.379 47.619 0.00 0.00 0.00 3.41
3020 3352 2.037902 TGTAACTTGCGTCTCCATCCAA 59.962 45.455 0.00 0.00 0.00 3.53
3024 3356 2.086869 CTTGCGTCTCCATCCAAATGT 58.913 47.619 0.00 0.00 0.00 2.71
3032 3364 6.460123 GCGTCTCCATCCAAATGTTGATATTT 60.460 38.462 0.00 0.00 0.00 1.40
3033 3365 6.914215 CGTCTCCATCCAAATGTTGATATTTG 59.086 38.462 6.31 6.31 44.01 2.32
3034 3366 7.201723 CGTCTCCATCCAAATGTTGATATTTGA 60.202 37.037 12.86 2.78 46.13 2.69
3035 3367 8.636213 GTCTCCATCCAAATGTTGATATTTGAT 58.364 33.333 12.86 4.49 46.13 2.57
3036 3368 9.865152 TCTCCATCCAAATGTTGATATTTGATA 57.135 29.630 12.86 3.78 46.13 2.15
3087 3419 9.630098 ACACATTTATTTCTGTCATCATTGTTC 57.370 29.630 0.00 0.00 0.00 3.18
3094 3426 6.980051 TTCTGTCATCATTGTTCATCTGAG 57.020 37.500 0.00 0.00 0.00 3.35
3099 3431 6.370718 TGTCATCATTGTTCATCTGAGTGAAG 59.629 38.462 3.75 0.00 38.68 3.02
3100 3432 6.592994 GTCATCATTGTTCATCTGAGTGAAGA 59.407 38.462 3.75 1.14 38.68 2.87
3122 3467 4.598036 ATGACCCTCAGTTTGATCCAAT 57.402 40.909 0.00 0.00 0.00 3.16
3123 3468 4.387026 TGACCCTCAGTTTGATCCAATT 57.613 40.909 0.00 0.00 0.00 2.32
3124 3469 5.512942 TGACCCTCAGTTTGATCCAATTA 57.487 39.130 0.00 0.00 0.00 1.40
3129 3474 5.819901 CCCTCAGTTTGATCCAATTAGTCTC 59.180 44.000 0.00 0.00 0.00 3.36
3152 3497 3.674423 GCGCTTTGCTATTGTTAGTCAG 58.326 45.455 0.00 0.00 41.73 3.51
3156 3501 4.633565 GCTTTGCTATTGTTAGTCAGCTCT 59.366 41.667 0.00 0.00 35.05 4.09
3180 3525 4.990426 AGTTTGTGCCAACATAGAATTTGC 59.010 37.500 0.00 0.00 35.83 3.68
3186 3531 5.804979 GTGCCAACATAGAATTTGCGTAATT 59.195 36.000 0.00 0.00 39.15 1.40
3187 3532 6.310224 GTGCCAACATAGAATTTGCGTAATTT 59.690 34.615 0.00 0.00 36.59 1.82
3188 3533 6.309980 TGCCAACATAGAATTTGCGTAATTTG 59.690 34.615 0.00 0.00 36.59 2.32
3189 3534 6.529829 GCCAACATAGAATTTGCGTAATTTGA 59.470 34.615 0.00 0.00 36.59 2.69
3190 3535 7.253750 GCCAACATAGAATTTGCGTAATTTGAG 60.254 37.037 0.00 0.00 36.59 3.02
3191 3536 7.967854 CCAACATAGAATTTGCGTAATTTGAGA 59.032 33.333 0.00 0.00 36.59 3.27
3192 3537 8.788813 CAACATAGAATTTGCGTAATTTGAGAC 58.211 33.333 0.00 0.00 36.59 3.36
3193 3538 8.039603 ACATAGAATTTGCGTAATTTGAGACA 57.960 30.769 0.00 0.00 36.59 3.41
3194 3539 8.511321 ACATAGAATTTGCGTAATTTGAGACAA 58.489 29.630 0.00 0.00 36.59 3.18
3195 3540 9.003112 CATAGAATTTGCGTAATTTGAGACAAG 57.997 33.333 0.00 0.00 36.59 3.16
3196 3541 6.970484 AGAATTTGCGTAATTTGAGACAAGT 58.030 32.000 0.00 0.00 36.59 3.16
3197 3542 7.078228 AGAATTTGCGTAATTTGAGACAAGTC 58.922 34.615 0.00 0.00 36.59 3.01
3198 3543 5.743026 TTTGCGTAATTTGAGACAAGTCA 57.257 34.783 2.72 0.00 0.00 3.41
3199 3544 4.990543 TGCGTAATTTGAGACAAGTCAG 57.009 40.909 2.72 0.00 0.00 3.51
3200 3545 4.377021 TGCGTAATTTGAGACAAGTCAGT 58.623 39.130 2.72 0.00 0.00 3.41
3201 3546 4.814234 TGCGTAATTTGAGACAAGTCAGTT 59.186 37.500 2.72 0.00 0.00 3.16
3202 3547 5.986741 TGCGTAATTTGAGACAAGTCAGTTA 59.013 36.000 2.72 0.00 0.00 2.24
3203 3548 6.649141 TGCGTAATTTGAGACAAGTCAGTTAT 59.351 34.615 2.72 0.00 0.00 1.89
3204 3549 7.815549 TGCGTAATTTGAGACAAGTCAGTTATA 59.184 33.333 2.72 0.00 0.00 0.98
3205 3550 8.321716 GCGTAATTTGAGACAAGTCAGTTATAG 58.678 37.037 2.72 0.00 0.00 1.31
3206 3551 8.321716 CGTAATTTGAGACAAGTCAGTTATAGC 58.678 37.037 2.72 0.00 0.00 2.97
3207 3552 9.151471 GTAATTTGAGACAAGTCAGTTATAGCA 57.849 33.333 2.72 0.00 0.00 3.49
3208 3553 8.798859 AATTTGAGACAAGTCAGTTATAGCAT 57.201 30.769 2.72 0.00 0.00 3.79
3209 3554 7.834068 TTTGAGACAAGTCAGTTATAGCATC 57.166 36.000 2.72 0.00 0.00 3.91
3210 3555 6.530019 TGAGACAAGTCAGTTATAGCATCA 57.470 37.500 2.72 0.00 0.00 3.07
3211 3556 6.935167 TGAGACAAGTCAGTTATAGCATCAA 58.065 36.000 2.72 0.00 0.00 2.57
3212 3557 7.386059 TGAGACAAGTCAGTTATAGCATCAAA 58.614 34.615 2.72 0.00 0.00 2.69
3213 3558 8.043113 TGAGACAAGTCAGTTATAGCATCAAAT 58.957 33.333 2.72 0.00 0.00 2.32
3214 3559 8.798859 AGACAAGTCAGTTATAGCATCAAATT 57.201 30.769 2.72 0.00 0.00 1.82
3215 3560 9.890629 AGACAAGTCAGTTATAGCATCAAATTA 57.109 29.630 2.72 0.00 0.00 1.40
3228 3573 7.199541 AGCATCAAATTATAGCATCTGTCAC 57.800 36.000 0.00 0.00 0.00 3.67
3229 3574 6.996879 AGCATCAAATTATAGCATCTGTCACT 59.003 34.615 0.00 0.00 0.00 3.41
3230 3575 7.501559 AGCATCAAATTATAGCATCTGTCACTT 59.498 33.333 0.00 0.00 0.00 3.16
3231 3576 8.133627 GCATCAAATTATAGCATCTGTCACTTT 58.866 33.333 0.00 0.00 0.00 2.66
3234 3579 8.461222 TCAAATTATAGCATCTGTCACTTTTGG 58.539 33.333 0.00 0.00 0.00 3.28
3235 3580 5.818136 TTATAGCATCTGTCACTTTTGGC 57.182 39.130 0.00 0.00 0.00 4.52
3236 3581 0.877071 AGCATCTGTCACTTTTGGCG 59.123 50.000 0.00 0.00 0.00 5.69
3237 3582 0.874390 GCATCTGTCACTTTTGGCGA 59.126 50.000 0.00 0.00 0.00 5.54
3238 3583 1.135859 GCATCTGTCACTTTTGGCGAG 60.136 52.381 0.00 0.00 0.00 5.03
3239 3584 2.146342 CATCTGTCACTTTTGGCGAGT 58.854 47.619 0.00 0.00 0.00 4.18
3240 3585 3.325870 CATCTGTCACTTTTGGCGAGTA 58.674 45.455 0.00 0.00 0.00 2.59
3241 3586 2.750948 TCTGTCACTTTTGGCGAGTAC 58.249 47.619 0.00 0.00 0.00 2.73
3242 3587 2.364324 TCTGTCACTTTTGGCGAGTACT 59.636 45.455 0.00 0.00 0.00 2.73
3243 3588 2.731976 CTGTCACTTTTGGCGAGTACTC 59.268 50.000 13.18 13.18 0.00 2.59
3244 3589 2.067013 GTCACTTTTGGCGAGTACTCC 58.933 52.381 17.23 9.71 0.00 3.85
3245 3590 1.001633 TCACTTTTGGCGAGTACTCCC 59.998 52.381 17.23 17.96 0.00 4.30
3246 3591 1.002087 CACTTTTGGCGAGTACTCCCT 59.998 52.381 23.01 7.32 0.00 4.20
3247 3592 1.275573 ACTTTTGGCGAGTACTCCCTC 59.724 52.381 23.01 12.51 0.00 4.30
3248 3593 1.550976 CTTTTGGCGAGTACTCCCTCT 59.449 52.381 23.01 0.00 0.00 3.69
3249 3594 0.895530 TTTGGCGAGTACTCCCTCTG 59.104 55.000 23.01 10.10 0.00 3.35
3250 3595 0.251653 TTGGCGAGTACTCCCTCTGT 60.252 55.000 23.01 0.00 0.00 3.41
3251 3596 0.622136 TGGCGAGTACTCCCTCTGTA 59.378 55.000 23.01 7.32 0.00 2.74
3252 3597 1.214673 TGGCGAGTACTCCCTCTGTAT 59.785 52.381 23.01 0.00 0.00 2.29
3253 3598 1.881324 GGCGAGTACTCCCTCTGTATC 59.119 57.143 17.23 0.00 0.00 2.24
3254 3599 2.573369 GCGAGTACTCCCTCTGTATCA 58.427 52.381 17.23 0.00 0.00 2.15
3255 3600 2.950309 GCGAGTACTCCCTCTGTATCAA 59.050 50.000 17.23 0.00 0.00 2.57
3256 3601 3.380637 GCGAGTACTCCCTCTGTATCAAA 59.619 47.826 17.23 0.00 0.00 2.69
3257 3602 4.142227 GCGAGTACTCCCTCTGTATCAAAA 60.142 45.833 17.23 0.00 0.00 2.44
3258 3603 5.452077 GCGAGTACTCCCTCTGTATCAAAAT 60.452 44.000 17.23 0.00 0.00 1.82
3259 3604 6.238953 GCGAGTACTCCCTCTGTATCAAAATA 60.239 42.308 17.23 0.00 0.00 1.40
3260 3605 7.524038 GCGAGTACTCCCTCTGTATCAAAATAT 60.524 40.741 17.23 0.00 0.00 1.28
3261 3606 9.011095 CGAGTACTCCCTCTGTATCAAAATATA 57.989 37.037 17.23 0.00 0.00 0.86
3266 3611 8.652290 ACTCCCTCTGTATCAAAATATAAGACC 58.348 37.037 0.00 0.00 0.00 3.85
3267 3612 8.798975 TCCCTCTGTATCAAAATATAAGACCT 57.201 34.615 0.00 0.00 0.00 3.85
3268 3613 9.225682 TCCCTCTGTATCAAAATATAAGACCTT 57.774 33.333 0.00 0.00 0.00 3.50
3269 3614 9.853177 CCCTCTGTATCAAAATATAAGACCTTT 57.147 33.333 0.00 0.00 0.00 3.11
3302 3647 7.645058 TGATCTATCAGTGTATCAGTGTCAA 57.355 36.000 0.00 0.00 36.33 3.18
3303 3648 8.066612 TGATCTATCAGTGTATCAGTGTCAAA 57.933 34.615 0.00 0.00 36.33 2.69
3304 3649 8.531146 TGATCTATCAGTGTATCAGTGTCAAAA 58.469 33.333 0.00 0.00 36.33 2.44
3305 3650 9.371136 GATCTATCAGTGTATCAGTGTCAAAAA 57.629 33.333 4.80 0.00 36.33 1.94
3328 3673 9.907229 AAAAAGGTCTTATATTTACAGAGGGAG 57.093 33.333 0.00 0.00 0.00 4.30
3329 3674 8.625467 AAAGGTCTTATATTTACAGAGGGAGT 57.375 34.615 0.00 0.00 0.00 3.85
3330 3675 9.725206 AAAGGTCTTATATTTACAGAGGGAGTA 57.275 33.333 0.00 0.00 0.00 2.59
3331 3676 9.725206 AAGGTCTTATATTTACAGAGGGAGTAA 57.275 33.333 0.00 0.00 0.00 2.24
3332 3677 9.900112 AGGTCTTATATTTACAGAGGGAGTAAT 57.100 33.333 0.00 0.00 32.07 1.89
3344 3689 8.794335 ACAGAGGGAGTAATTTTTATGAGTTC 57.206 34.615 0.00 0.00 0.00 3.01
3345 3690 7.829706 ACAGAGGGAGTAATTTTTATGAGTTCC 59.170 37.037 0.00 0.00 0.00 3.62
3346 3691 7.829211 CAGAGGGAGTAATTTTTATGAGTTCCA 59.171 37.037 0.00 0.00 0.00 3.53
3347 3692 7.829706 AGAGGGAGTAATTTTTATGAGTTCCAC 59.170 37.037 0.00 0.00 0.00 4.02
3348 3693 7.699878 AGGGAGTAATTTTTATGAGTTCCACT 58.300 34.615 0.00 0.00 0.00 4.00
3349 3694 8.170730 AGGGAGTAATTTTTATGAGTTCCACTT 58.829 33.333 0.00 0.00 0.00 3.16
3350 3695 8.459635 GGGAGTAATTTTTATGAGTTCCACTTC 58.540 37.037 0.00 0.00 0.00 3.01
3351 3696 8.459635 GGAGTAATTTTTATGAGTTCCACTTCC 58.540 37.037 0.00 0.00 0.00 3.46
3352 3697 8.934023 AGTAATTTTTATGAGTTCCACTTCCA 57.066 30.769 0.00 0.00 0.00 3.53
3353 3698 8.793592 AGTAATTTTTATGAGTTCCACTTCCAC 58.206 33.333 0.00 0.00 0.00 4.02
3354 3699 6.590234 ATTTTTATGAGTTCCACTTCCACC 57.410 37.500 0.00 0.00 0.00 4.61
3355 3700 4.715534 TTTATGAGTTCCACTTCCACCA 57.284 40.909 0.00 0.00 0.00 4.17
3356 3701 2.867109 ATGAGTTCCACTTCCACCAG 57.133 50.000 0.00 0.00 0.00 4.00
3357 3702 1.507140 TGAGTTCCACTTCCACCAGT 58.493 50.000 0.00 0.00 0.00 4.00
3358 3703 1.140852 TGAGTTCCACTTCCACCAGTG 59.859 52.381 0.00 0.00 43.46 3.66
3359 3704 0.179018 AGTTCCACTTCCACCAGTGC 60.179 55.000 0.00 0.00 42.63 4.40
3360 3705 1.150536 TTCCACTTCCACCAGTGCC 59.849 57.895 0.00 0.00 42.63 5.01
3361 3706 1.352622 TTCCACTTCCACCAGTGCCT 61.353 55.000 0.00 0.00 42.63 4.75
3362 3707 1.601759 CCACTTCCACCAGTGCCTG 60.602 63.158 0.00 0.00 42.63 4.85
3363 3708 1.451504 CACTTCCACCAGTGCCTGA 59.548 57.895 4.00 0.00 37.96 3.86
3364 3709 0.179020 CACTTCCACCAGTGCCTGAA 60.179 55.000 4.00 0.00 37.96 3.02
3365 3710 0.109342 ACTTCCACCAGTGCCTGAAG 59.891 55.000 11.42 11.42 38.65 3.02
3366 3711 0.607489 CTTCCACCAGTGCCTGAAGG 60.607 60.000 4.00 0.00 32.44 3.46
3367 3712 1.352622 TTCCACCAGTGCCTGAAGGT 61.353 55.000 4.00 0.00 37.57 3.50
3368 3713 4.069869 CACCAGTGCCTGAAGGTG 57.930 61.111 4.00 0.00 44.72 4.00
3369 3714 3.986054 ACCAGTGCCTGAAGGTGA 58.014 55.556 4.00 0.00 37.57 4.02
3370 3715 2.468015 ACCAGTGCCTGAAGGTGAT 58.532 52.632 4.00 0.00 37.57 3.06
3371 3716 1.656587 ACCAGTGCCTGAAGGTGATA 58.343 50.000 4.00 0.00 37.57 2.15
3372 3717 1.279271 ACCAGTGCCTGAAGGTGATAC 59.721 52.381 4.00 0.00 37.57 2.24
3373 3718 1.556911 CCAGTGCCTGAAGGTGATACT 59.443 52.381 4.00 0.00 37.57 2.12
3374 3719 2.625737 CAGTGCCTGAAGGTGATACTG 58.374 52.381 0.00 4.89 37.57 2.74
3375 3720 2.027745 CAGTGCCTGAAGGTGATACTGT 60.028 50.000 12.78 0.00 37.57 3.55
3376 3721 2.234908 AGTGCCTGAAGGTGATACTGTC 59.765 50.000 0.00 0.00 37.57 3.51
3377 3722 2.028112 GTGCCTGAAGGTGATACTGTCA 60.028 50.000 0.00 0.00 37.57 3.58
3385 3730 1.807226 TGATACTGTCACTCCCGCG 59.193 57.895 0.00 0.00 0.00 6.46
3386 3731 0.678684 TGATACTGTCACTCCCGCGA 60.679 55.000 8.23 0.00 0.00 5.87
3387 3732 0.029567 GATACTGTCACTCCCGCGAG 59.970 60.000 8.23 0.00 42.32 5.03
3388 3733 2.005960 ATACTGTCACTCCCGCGAGC 62.006 60.000 8.23 0.00 40.03 5.03
3393 3738 3.506096 CACTCCCGCGAGCGTCTA 61.506 66.667 8.23 0.50 40.03 2.59
3394 3739 3.203412 ACTCCCGCGAGCGTCTAG 61.203 66.667 8.23 11.98 40.03 2.43
3395 3740 3.955101 CTCCCGCGAGCGTCTAGG 61.955 72.222 8.23 10.10 37.81 3.02
3396 3741 4.790962 TCCCGCGAGCGTCTAGGT 62.791 66.667 8.23 0.00 37.81 3.08
3397 3742 2.898840 CCCGCGAGCGTCTAGGTA 60.899 66.667 8.23 0.00 37.81 3.08
3398 3743 2.632541 CCGCGAGCGTCTAGGTAG 59.367 66.667 8.23 0.00 37.81 3.18
3399 3744 2.632541 CGCGAGCGTCTAGGTAGG 59.367 66.667 0.00 0.00 34.35 3.18
3400 3745 2.332159 GCGAGCGTCTAGGTAGGC 59.668 66.667 0.00 0.00 0.00 3.93
3408 3753 0.592148 GTCTAGGTAGGCGATCCACG 59.408 60.000 0.00 0.00 45.66 4.94
3409 3754 0.182061 TCTAGGTAGGCGATCCACGT 59.818 55.000 0.00 0.00 44.60 4.49
3417 3762 3.605612 CGATCCACGTCTCGCATG 58.394 61.111 0.00 0.00 37.22 4.06
3418 3763 2.580470 CGATCCACGTCTCGCATGC 61.580 63.158 7.91 7.91 37.22 4.06
3419 3764 2.580470 GATCCACGTCTCGCATGCG 61.580 63.158 33.61 33.61 41.35 4.73
3460 3805 3.462678 GGCCACCTCCTCGGTCTC 61.463 72.222 0.00 0.00 44.93 3.36
3461 3806 3.462678 GCCACCTCCTCGGTCTCC 61.463 72.222 0.00 0.00 44.93 3.71
3462 3807 2.760385 CCACCTCCTCGGTCTCCC 60.760 72.222 0.00 0.00 44.93 4.30
3463 3808 2.760385 CACCTCCTCGGTCTCCCC 60.760 72.222 0.00 0.00 44.93 4.81
3464 3809 2.947785 ACCTCCTCGGTCTCCCCT 60.948 66.667 0.00 0.00 44.93 4.79
3465 3810 1.621822 ACCTCCTCGGTCTCCCCTA 60.622 63.158 0.00 0.00 44.93 3.53
3466 3811 1.151908 CCTCCTCGGTCTCCCCTAG 59.848 68.421 0.00 0.00 0.00 3.02
3467 3812 1.354168 CCTCCTCGGTCTCCCCTAGA 61.354 65.000 0.00 0.00 0.00 2.43
3473 3818 3.902086 GTCTCCCCTAGACGCCGC 61.902 72.222 0.00 0.00 45.05 6.53
3474 3819 4.124943 TCTCCCCTAGACGCCGCT 62.125 66.667 0.00 0.00 0.00 5.52
3475 3820 3.905678 CTCCCCTAGACGCCGCTG 61.906 72.222 0.00 0.00 0.00 5.18
3479 3824 4.577246 CCTAGACGCCGCTGCCTC 62.577 72.222 0.00 0.00 0.00 4.70
3480 3825 4.577246 CTAGACGCCGCTGCCTCC 62.577 72.222 0.00 0.00 0.00 4.30
3487 3832 3.473647 CCGCTGCCTCCATGGAGA 61.474 66.667 38.37 21.31 44.53 3.71
3488 3833 2.815945 CCGCTGCCTCCATGGAGAT 61.816 63.158 38.37 0.00 44.53 2.75
3489 3834 1.301558 CGCTGCCTCCATGGAGATC 60.302 63.158 38.37 28.41 44.53 2.75
3490 3835 1.301558 GCTGCCTCCATGGAGATCG 60.302 63.158 38.37 25.62 44.53 3.69
3491 3836 1.370437 CTGCCTCCATGGAGATCGG 59.630 63.158 38.37 28.47 44.53 4.18
3492 3837 2.031768 GCCTCCATGGAGATCGGC 59.968 66.667 38.37 30.30 44.53 5.54
3493 3838 2.746359 CCTCCATGGAGATCGGCC 59.254 66.667 38.37 0.00 44.53 6.13
3494 3839 1.840650 CCTCCATGGAGATCGGCCT 60.841 63.158 38.37 0.00 44.53 5.19
3495 3840 1.370437 CTCCATGGAGATCGGCCTG 59.630 63.158 34.54 6.69 44.53 4.85
3496 3841 2.281345 CCATGGAGATCGGCCTGC 60.281 66.667 5.56 0.00 0.00 4.85
3497 3842 2.664185 CATGGAGATCGGCCTGCG 60.664 66.667 0.00 0.00 0.00 5.18
3498 3843 2.839632 ATGGAGATCGGCCTGCGA 60.840 61.111 0.00 0.00 0.00 5.10
3499 3844 2.865598 ATGGAGATCGGCCTGCGAG 61.866 63.158 0.00 0.00 0.00 5.03
3500 3845 4.959596 GGAGATCGGCCTGCGAGC 62.960 72.222 0.00 0.00 0.00 5.03
3501 3846 3.910490 GAGATCGGCCTGCGAGCT 61.910 66.667 0.00 0.16 34.66 4.09
3502 3847 4.218578 AGATCGGCCTGCGAGCTG 62.219 66.667 0.00 0.21 40.71 4.24
3565 3910 3.567797 GGCCGCGTGATGCTTCTC 61.568 66.667 4.92 0.00 43.27 2.87
3566 3911 2.510238 GCCGCGTGATGCTTCTCT 60.510 61.111 4.92 0.00 43.27 3.10
3567 3912 2.103042 GCCGCGTGATGCTTCTCTT 61.103 57.895 4.92 0.00 43.27 2.85
3568 3913 1.712081 CCGCGTGATGCTTCTCTTG 59.288 57.895 4.92 0.00 43.27 3.02
3569 3914 1.699656 CCGCGTGATGCTTCTCTTGG 61.700 60.000 4.92 0.00 43.27 3.61
3570 3915 0.737367 CGCGTGATGCTTCTCTTGGA 60.737 55.000 0.00 0.00 43.27 3.53
3571 3916 1.005340 GCGTGATGCTTCTCTTGGAG 58.995 55.000 0.88 0.00 41.73 3.86
3572 3917 1.649664 CGTGATGCTTCTCTTGGAGG 58.350 55.000 0.88 0.00 0.00 4.30
3573 3918 1.741732 CGTGATGCTTCTCTTGGAGGG 60.742 57.143 0.88 0.00 0.00 4.30
3574 3919 1.556911 GTGATGCTTCTCTTGGAGGGA 59.443 52.381 0.88 0.00 0.00 4.20
3575 3920 1.556911 TGATGCTTCTCTTGGAGGGAC 59.443 52.381 0.88 0.00 0.00 4.46
3576 3921 0.539051 ATGCTTCTCTTGGAGGGACG 59.461 55.000 0.00 0.00 0.00 4.79
3577 3922 1.219393 GCTTCTCTTGGAGGGACGG 59.781 63.158 0.00 0.00 0.00 4.79
3578 3923 1.258445 GCTTCTCTTGGAGGGACGGA 61.258 60.000 0.00 0.00 0.00 4.69
3579 3924 0.533032 CTTCTCTTGGAGGGACGGAC 59.467 60.000 0.00 0.00 0.00 4.79
3580 3925 1.248785 TTCTCTTGGAGGGACGGACG 61.249 60.000 0.00 0.00 0.00 4.79
3581 3926 3.358076 CTCTTGGAGGGACGGACGC 62.358 68.421 0.00 0.00 0.00 5.19
3582 3927 3.382832 CTTGGAGGGACGGACGCT 61.383 66.667 0.00 0.00 44.45 5.07
3583 3928 3.649277 CTTGGAGGGACGGACGCTG 62.649 68.421 1.35 0.00 41.84 5.18
3593 3938 3.423154 GGACGCTGCCGGAGTTTG 61.423 66.667 5.05 0.00 39.22 2.93
3594 3939 3.423154 GACGCTGCCGGAGTTTGG 61.423 66.667 5.05 0.00 39.22 3.28
3604 3949 3.827752 GAGTTTGGCTCCCTCCCT 58.172 61.111 0.00 0.00 38.27 4.20
3605 3950 1.604915 GAGTTTGGCTCCCTCCCTC 59.395 63.158 0.00 0.00 38.27 4.30
3606 3951 1.916206 GAGTTTGGCTCCCTCCCTCC 61.916 65.000 0.00 0.00 38.27 4.30
3607 3952 2.209809 TTTGGCTCCCTCCCTCCA 59.790 61.111 0.00 0.00 0.00 3.86
3608 3953 1.230281 TTTGGCTCCCTCCCTCCAT 60.230 57.895 0.00 0.00 0.00 3.41
3609 3954 1.281925 TTTGGCTCCCTCCCTCCATC 61.282 60.000 0.00 0.00 0.00 3.51
3610 3955 2.200373 TTGGCTCCCTCCCTCCATCT 62.200 60.000 0.00 0.00 0.00 2.90
3611 3956 1.841103 GGCTCCCTCCCTCCATCTC 60.841 68.421 0.00 0.00 0.00 2.75
3612 3957 1.841103 GCTCCCTCCCTCCATCTCC 60.841 68.421 0.00 0.00 0.00 3.71
3613 3958 1.945447 CTCCCTCCCTCCATCTCCT 59.055 63.158 0.00 0.00 0.00 3.69
3614 3959 0.267356 CTCCCTCCCTCCATCTCCTT 59.733 60.000 0.00 0.00 0.00 3.36
3615 3960 0.266152 TCCCTCCCTCCATCTCCTTC 59.734 60.000 0.00 0.00 0.00 3.46
3616 3961 1.118356 CCCTCCCTCCATCTCCTTCG 61.118 65.000 0.00 0.00 0.00 3.79
3617 3962 1.745264 CTCCCTCCATCTCCTTCGC 59.255 63.158 0.00 0.00 0.00 4.70
3618 3963 2.081425 CTCCCTCCATCTCCTTCGCG 62.081 65.000 0.00 0.00 0.00 5.87
3619 3964 2.427245 CCCTCCATCTCCTTCGCGT 61.427 63.158 5.77 0.00 0.00 6.01
3620 3965 1.066587 CCTCCATCTCCTTCGCGTC 59.933 63.158 5.77 0.00 0.00 5.19
3621 3966 1.298713 CTCCATCTCCTTCGCGTCG 60.299 63.158 5.77 0.00 0.00 5.12
3622 3967 1.715862 CTCCATCTCCTTCGCGTCGA 61.716 60.000 5.77 0.00 0.00 4.20
3623 3968 1.138883 CCATCTCCTTCGCGTCGAA 59.861 57.895 5.77 12.72 43.75 3.71
3630 3975 2.875485 TTCGCGTCGAAGGAGGAG 59.125 61.111 5.77 0.00 41.05 3.69
3631 3976 3.338126 TTCGCGTCGAAGGAGGAGC 62.338 63.158 5.77 0.00 41.05 4.70
3632 3977 3.816524 CGCGTCGAAGGAGGAGCT 61.817 66.667 0.00 0.00 0.00 4.09
3633 3978 2.202676 GCGTCGAAGGAGGAGCTG 60.203 66.667 0.00 0.00 0.00 4.24
3634 3979 2.202676 CGTCGAAGGAGGAGCTGC 60.203 66.667 0.00 0.00 0.00 5.25
3635 3980 2.705821 CGTCGAAGGAGGAGCTGCT 61.706 63.158 7.79 7.79 32.35 4.24
3636 3981 1.140804 GTCGAAGGAGGAGCTGCTC 59.859 63.158 25.81 25.81 28.86 4.26
3637 3982 1.000270 TCGAAGGAGGAGCTGCTCT 60.000 57.895 30.98 15.47 28.86 4.09
3638 3983 0.613292 TCGAAGGAGGAGCTGCTCTT 60.613 55.000 30.98 23.49 28.86 2.85
3639 3984 0.459934 CGAAGGAGGAGCTGCTCTTG 60.460 60.000 30.98 15.00 28.86 3.02
3640 3985 0.107752 GAAGGAGGAGCTGCTCTTGG 60.108 60.000 30.98 0.00 28.86 3.61
3641 3986 2.124778 GGAGGAGCTGCTCTTGGC 60.125 66.667 30.98 13.57 42.22 4.52
3642 3987 2.511145 GAGGAGCTGCTCTTGGCG 60.511 66.667 26.40 0.00 45.43 5.69
3643 3988 3.308014 GAGGAGCTGCTCTTGGCGT 62.308 63.158 26.40 4.94 45.43 5.68
3644 3989 2.817396 GGAGCTGCTCTTGGCGTC 60.817 66.667 27.09 6.83 45.43 5.19
3645 3990 3.184683 GAGCTGCTCTTGGCGTCG 61.185 66.667 21.93 0.00 45.43 5.12
3677 4022 4.821589 CTTCCTCGCCGCCTCCAC 62.822 72.222 0.00 0.00 0.00 4.02
3686 4031 3.461773 CGCCTCCACTCCGTCCAT 61.462 66.667 0.00 0.00 0.00 3.41
3687 4032 2.187946 GCCTCCACTCCGTCCATG 59.812 66.667 0.00 0.00 0.00 3.66
3688 4033 2.187946 CCTCCACTCCGTCCATGC 59.812 66.667 0.00 0.00 0.00 4.06
3689 4034 2.362369 CCTCCACTCCGTCCATGCT 61.362 63.158 0.00 0.00 0.00 3.79
3690 4035 1.153489 CTCCACTCCGTCCATGCTG 60.153 63.158 0.00 0.00 0.00 4.41
3691 4036 2.821366 CCACTCCGTCCATGCTGC 60.821 66.667 0.00 0.00 0.00 5.25
3692 4037 3.190849 CACTCCGTCCATGCTGCG 61.191 66.667 0.00 0.00 0.00 5.18
3693 4038 3.695606 ACTCCGTCCATGCTGCGT 61.696 61.111 0.00 0.00 0.00 5.24
3694 4039 2.887568 CTCCGTCCATGCTGCGTC 60.888 66.667 0.00 0.00 0.00 5.19
3695 4040 4.794439 TCCGTCCATGCTGCGTCG 62.794 66.667 0.00 0.00 0.00 5.12
3697 4042 3.545481 CGTCCATGCTGCGTCGTC 61.545 66.667 0.00 0.00 0.00 4.20
3698 4043 3.545481 GTCCATGCTGCGTCGTCG 61.545 66.667 0.00 0.00 40.37 5.12
3699 4044 4.794439 TCCATGCTGCGTCGTCGG 62.794 66.667 3.90 0.00 37.56 4.79
3712 4057 4.021925 GTCGGCTGGCTGGGACTT 62.022 66.667 0.00 0.00 0.00 3.01
3713 4058 3.706373 TCGGCTGGCTGGGACTTC 61.706 66.667 0.00 0.00 0.00 3.01
3717 4062 3.710722 CTGGCTGGGACTTCGCCT 61.711 66.667 0.00 0.00 44.09 5.52
3718 4063 3.672295 CTGGCTGGGACTTCGCCTC 62.672 68.421 0.00 0.00 44.09 4.70
3719 4064 4.475135 GGCTGGGACTTCGCCTCC 62.475 72.222 0.00 0.00 40.62 4.30
3720 4065 4.821589 GCTGGGACTTCGCCTCCG 62.822 72.222 0.00 0.00 0.00 4.63
3721 4066 4.821589 CTGGGACTTCGCCTCCGC 62.822 72.222 0.00 0.00 0.00 5.54
3723 4068 4.083862 GGGACTTCGCCTCCGCTT 62.084 66.667 0.00 0.00 0.00 4.68
3724 4069 2.509561 GGACTTCGCCTCCGCTTC 60.510 66.667 0.00 0.00 0.00 3.86
3725 4070 2.574399 GACTTCGCCTCCGCTTCT 59.426 61.111 0.00 0.00 0.00 2.85
3726 4071 1.079750 GACTTCGCCTCCGCTTCTT 60.080 57.895 0.00 0.00 0.00 2.52
3727 4072 1.079317 GACTTCGCCTCCGCTTCTTC 61.079 60.000 0.00 0.00 0.00 2.87
3728 4073 2.126071 TTCGCCTCCGCTTCTTCG 60.126 61.111 0.00 0.00 0.00 3.79
3753 4098 3.502572 GGCGATGCCCTTCTTCAC 58.497 61.111 0.00 0.00 44.06 3.18
3754 4099 1.078143 GGCGATGCCCTTCTTCACT 60.078 57.895 0.00 0.00 44.06 3.41
3755 4100 0.178068 GGCGATGCCCTTCTTCACTA 59.822 55.000 0.00 0.00 44.06 2.74
3756 4101 1.291132 GCGATGCCCTTCTTCACTAC 58.709 55.000 0.00 0.00 0.00 2.73
3757 4102 1.134670 GCGATGCCCTTCTTCACTACT 60.135 52.381 0.00 0.00 0.00 2.57
3758 4103 2.815478 CGATGCCCTTCTTCACTACTC 58.185 52.381 0.00 0.00 0.00 2.59
3759 4104 2.796383 CGATGCCCTTCTTCACTACTCG 60.796 54.545 0.00 0.00 0.00 4.18
3760 4105 0.246635 TGCCCTTCTTCACTACTCGC 59.753 55.000 0.00 0.00 0.00 5.03
3761 4106 0.533032 GCCCTTCTTCACTACTCGCT 59.467 55.000 0.00 0.00 0.00 4.93
3762 4107 1.737363 GCCCTTCTTCACTACTCGCTG 60.737 57.143 0.00 0.00 0.00 5.18
3763 4108 1.819288 CCCTTCTTCACTACTCGCTGA 59.181 52.381 0.00 0.00 0.00 4.26
3764 4109 2.416162 CCCTTCTTCACTACTCGCTGAC 60.416 54.545 0.00 0.00 0.00 3.51
3765 4110 2.490115 CCTTCTTCACTACTCGCTGACT 59.510 50.000 0.00 0.00 0.00 3.41
3766 4111 3.426963 CCTTCTTCACTACTCGCTGACTC 60.427 52.174 0.00 0.00 0.00 3.36
3767 4112 2.779506 TCTTCACTACTCGCTGACTCA 58.220 47.619 0.00 0.00 0.00 3.41
3768 4113 2.744741 TCTTCACTACTCGCTGACTCAG 59.255 50.000 1.21 1.21 34.12 3.35
3769 4114 2.186532 TCACTACTCGCTGACTCAGT 57.813 50.000 7.89 0.00 33.43 3.41
3770 4115 2.505405 TCACTACTCGCTGACTCAGTT 58.495 47.619 7.89 0.00 33.43 3.16
3771 4116 2.484651 TCACTACTCGCTGACTCAGTTC 59.515 50.000 7.89 0.00 33.43 3.01
3772 4117 2.486203 CACTACTCGCTGACTCAGTTCT 59.514 50.000 7.89 0.00 33.43 3.01
3773 4118 2.745281 ACTACTCGCTGACTCAGTTCTC 59.255 50.000 7.89 0.00 33.43 2.87
3774 4119 0.885196 ACTCGCTGACTCAGTTCTCC 59.115 55.000 7.89 0.00 33.43 3.71
3775 4120 1.173043 CTCGCTGACTCAGTTCTCCT 58.827 55.000 7.89 0.00 33.43 3.69
3776 4121 1.132262 CTCGCTGACTCAGTTCTCCTC 59.868 57.143 7.89 0.00 33.43 3.71
3777 4122 0.179176 CGCTGACTCAGTTCTCCTCG 60.179 60.000 7.89 0.00 33.43 4.63
3778 4123 0.457681 GCTGACTCAGTTCTCCTCGC 60.458 60.000 7.89 0.00 33.43 5.03
3779 4124 0.172352 CTGACTCAGTTCTCCTCGCC 59.828 60.000 0.00 0.00 0.00 5.54
3780 4125 1.137825 GACTCAGTTCTCCTCGCCG 59.862 63.158 0.00 0.00 0.00 6.46
3781 4126 2.272918 GACTCAGTTCTCCTCGCCGG 62.273 65.000 0.00 0.00 0.00 6.13
3782 4127 2.282958 TCAGTTCTCCTCGCCGGT 60.283 61.111 1.90 0.00 0.00 5.28
3783 4128 1.001764 TCAGTTCTCCTCGCCGGTA 60.002 57.895 1.90 0.00 0.00 4.02
3784 4129 0.395311 TCAGTTCTCCTCGCCGGTAT 60.395 55.000 1.90 0.00 0.00 2.73
3785 4130 0.249073 CAGTTCTCCTCGCCGGTATG 60.249 60.000 1.90 0.00 0.00 2.39
3786 4131 0.683504 AGTTCTCCTCGCCGGTATGT 60.684 55.000 1.90 0.00 0.00 2.29
3787 4132 0.175073 GTTCTCCTCGCCGGTATGTT 59.825 55.000 1.90 0.00 0.00 2.71
3788 4133 0.899720 TTCTCCTCGCCGGTATGTTT 59.100 50.000 1.90 0.00 0.00 2.83
3789 4134 0.458669 TCTCCTCGCCGGTATGTTTC 59.541 55.000 1.90 0.00 0.00 2.78
3790 4135 0.529992 CTCCTCGCCGGTATGTTTCC 60.530 60.000 1.90 0.00 0.00 3.13
3791 4136 1.523032 CCTCGCCGGTATGTTTCCC 60.523 63.158 1.90 0.00 0.00 3.97
3792 4137 1.520666 CTCGCCGGTATGTTTCCCT 59.479 57.895 1.90 0.00 0.00 4.20
3793 4138 0.529992 CTCGCCGGTATGTTTCCCTC 60.530 60.000 1.90 0.00 0.00 4.30
3794 4139 0.974010 TCGCCGGTATGTTTCCCTCT 60.974 55.000 1.90 0.00 0.00 3.69
3795 4140 0.529992 CGCCGGTATGTTTCCCTCTC 60.530 60.000 1.90 0.00 0.00 3.20
3796 4141 0.539986 GCCGGTATGTTTCCCTCTCA 59.460 55.000 1.90 0.00 0.00 3.27
3797 4142 1.742750 GCCGGTATGTTTCCCTCTCAC 60.743 57.143 1.90 0.00 0.00 3.51
3798 4143 1.831736 CCGGTATGTTTCCCTCTCACT 59.168 52.381 0.00 0.00 0.00 3.41
3799 4144 2.159085 CCGGTATGTTTCCCTCTCACTC 60.159 54.545 0.00 0.00 0.00 3.51
3800 4145 2.159085 CGGTATGTTTCCCTCTCACTCC 60.159 54.545 0.00 0.00 0.00 3.85
3801 4146 2.159085 GGTATGTTTCCCTCTCACTCCG 60.159 54.545 0.00 0.00 0.00 4.63
3802 4147 0.905357 ATGTTTCCCTCTCACTCCGG 59.095 55.000 0.00 0.00 0.00 5.14
3803 4148 1.079057 GTTTCCCTCTCACTCCGGC 60.079 63.158 0.00 0.00 0.00 6.13
3804 4149 2.646175 TTTCCCTCTCACTCCGGCG 61.646 63.158 0.00 0.00 0.00 6.46
3820 4165 4.933064 CGCCGGCCTCGACATCTC 62.933 72.222 23.46 0.00 39.00 2.75
3821 4166 4.593864 GCCGGCCTCGACATCTCC 62.594 72.222 18.11 0.00 39.00 3.71
3822 4167 4.271816 CCGGCCTCGACATCTCCG 62.272 72.222 0.00 0.00 39.00 4.63
3823 4168 4.271816 CGGCCTCGACATCTCCGG 62.272 72.222 0.00 0.00 39.00 5.14
3824 4169 2.833582 GGCCTCGACATCTCCGGA 60.834 66.667 2.93 2.93 0.00 5.14
3825 4170 2.203771 GGCCTCGACATCTCCGGAT 61.204 63.158 3.57 0.00 0.00 4.18
3826 4171 1.742768 GCCTCGACATCTCCGGATT 59.257 57.895 3.57 0.00 0.00 3.01
3827 4172 0.105039 GCCTCGACATCTCCGGATTT 59.895 55.000 3.57 0.00 0.00 2.17
3828 4173 1.858091 CCTCGACATCTCCGGATTTG 58.142 55.000 3.57 8.54 0.00 2.32
3829 4174 1.539065 CCTCGACATCTCCGGATTTGG 60.539 57.143 3.57 0.00 0.00 3.28
3830 4175 1.137086 CTCGACATCTCCGGATTTGGT 59.863 52.381 3.57 0.48 0.00 3.67
3831 4176 2.361119 CTCGACATCTCCGGATTTGGTA 59.639 50.000 3.57 0.00 0.00 3.25
3832 4177 2.963101 TCGACATCTCCGGATTTGGTAT 59.037 45.455 3.57 0.00 0.00 2.73
3833 4178 3.059884 CGACATCTCCGGATTTGGTATG 58.940 50.000 3.57 5.14 32.95 2.39
3834 4179 3.403038 GACATCTCCGGATTTGGTATGG 58.597 50.000 3.57 0.00 31.79 2.74
3835 4180 2.106511 ACATCTCCGGATTTGGTATGGG 59.893 50.000 3.57 0.00 31.79 4.00
3836 4181 1.887797 TCTCCGGATTTGGTATGGGT 58.112 50.000 3.57 0.00 0.00 4.51
3837 4182 1.766496 TCTCCGGATTTGGTATGGGTC 59.234 52.381 3.57 0.00 0.00 4.46
3838 4183 0.841289 TCCGGATTTGGTATGGGTCC 59.159 55.000 0.00 0.00 0.00 4.46
3839 4184 0.548989 CCGGATTTGGTATGGGTCCA 59.451 55.000 0.00 0.00 0.00 4.02
3840 4185 1.064314 CCGGATTTGGTATGGGTCCAA 60.064 52.381 0.00 0.00 42.29 3.53
3841 4186 2.297701 CGGATTTGGTATGGGTCCAAG 58.702 52.381 0.00 0.00 44.26 3.61
3842 4187 2.356741 CGGATTTGGTATGGGTCCAAGT 60.357 50.000 0.00 0.00 44.26 3.16
3843 4188 3.023832 GGATTTGGTATGGGTCCAAGTG 58.976 50.000 0.00 0.00 44.26 3.16
3844 4189 3.563479 GGATTTGGTATGGGTCCAAGTGT 60.563 47.826 0.00 0.00 44.26 3.55
3845 4190 3.603965 TTTGGTATGGGTCCAAGTGTT 57.396 42.857 0.00 0.00 44.26 3.32
3846 4191 2.577606 TGGTATGGGTCCAAGTGTTG 57.422 50.000 0.00 0.00 31.50 3.33
3847 4192 1.173913 GGTATGGGTCCAAGTGTTGC 58.826 55.000 0.00 0.00 0.00 4.17
3848 4193 1.271926 GGTATGGGTCCAAGTGTTGCT 60.272 52.381 0.00 0.00 0.00 3.91
3849 4194 1.812571 GTATGGGTCCAAGTGTTGCTG 59.187 52.381 0.00 0.00 0.00 4.41
3850 4195 1.181098 ATGGGTCCAAGTGTTGCTGC 61.181 55.000 0.00 0.00 0.00 5.25
3851 4196 2.564721 GGGTCCAAGTGTTGCTGCC 61.565 63.158 0.00 0.00 0.00 4.85
3852 4197 2.639286 GTCCAAGTGTTGCTGCCG 59.361 61.111 0.00 0.00 0.00 5.69
3853 4198 2.186826 GTCCAAGTGTTGCTGCCGT 61.187 57.895 0.00 0.00 0.00 5.68
3854 4199 1.891919 TCCAAGTGTTGCTGCCGTC 60.892 57.895 0.00 0.00 0.00 4.79
3855 4200 2.249309 CAAGTGTTGCTGCCGTCG 59.751 61.111 0.00 0.00 0.00 5.12
3856 4201 3.649986 AAGTGTTGCTGCCGTCGC 61.650 61.111 0.00 0.00 0.00 5.19
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
91 92 0.179215 CTTTGGTTGCATCGTCGCTC 60.179 55.000 0.00 0.00 0.00 5.03
105 106 2.125512 CCGCGTCTCCTCCTTTGG 60.126 66.667 4.92 0.00 0.00 3.28
178 179 2.479275 CAGTGTGCTTGTCAGTGATCTG 59.521 50.000 0.00 0.00 42.54 2.90
277 290 3.458189 CTCTATTGTAACAGGCCCTTCG 58.542 50.000 0.00 0.00 0.00 3.79
352 365 1.285950 GTTTTCTGCTTCCACGGCC 59.714 57.895 0.00 0.00 0.00 6.13
370 383 6.706716 TGATCTATGAAGTCCGAGTAGTAGTG 59.293 42.308 0.00 0.00 0.00 2.74
371 384 6.828788 TGATCTATGAAGTCCGAGTAGTAGT 58.171 40.000 0.00 0.00 0.00 2.73
372 385 7.156000 TCTGATCTATGAAGTCCGAGTAGTAG 58.844 42.308 0.00 0.00 0.00 2.57
391 404 7.213216 TGCTGATCTTGTATCTACTCTGATC 57.787 40.000 0.00 0.00 32.85 2.92
404 420 4.973168 TCTTTACCAGTTGCTGATCTTGT 58.027 39.130 0.00 0.00 32.44 3.16
417 433 8.607459 CAAGCACATACTAGAAATCTTTACCAG 58.393 37.037 0.00 0.00 0.00 4.00
430 446 7.280876 ACCATATGAACAACAAGCACATACTAG 59.719 37.037 3.65 0.00 0.00 2.57
431 447 7.065683 CACCATATGAACAACAAGCACATACTA 59.934 37.037 3.65 0.00 0.00 1.82
432 448 5.945784 ACCATATGAACAACAAGCACATACT 59.054 36.000 3.65 0.00 0.00 2.12
433 449 6.029607 CACCATATGAACAACAAGCACATAC 58.970 40.000 3.65 0.00 0.00 2.39
434 450 5.942826 TCACCATATGAACAACAAGCACATA 59.057 36.000 3.65 0.00 33.02 2.29
435 451 4.766373 TCACCATATGAACAACAAGCACAT 59.234 37.500 3.65 0.00 33.02 3.21
516 534 1.066587 CCTAGCCTACGAGTGCAGC 59.933 63.158 0.00 0.00 0.00 5.25
539 557 3.957671 ATGCATCTTACAACATGCTCG 57.042 42.857 0.00 0.00 44.90 5.03
557 575 5.009854 ACACCTGTTTTGTCCAAGAAATG 57.990 39.130 0.00 0.00 0.00 2.32
572 590 7.913789 TGGTAATCTTACATCTTTACACCTGT 58.086 34.615 2.77 0.00 35.37 4.00
623 643 9.330063 ACACTAATTCCATAACATACATGAGTG 57.670 33.333 0.00 0.00 33.12 3.51
649 670 7.378966 TGCCATGAAATTTACGTGGAAAATAA 58.621 30.769 22.58 6.77 44.44 1.40
1060 1350 3.204827 GCAGCGGATGTGGCGAAT 61.205 61.111 0.00 0.00 35.00 3.34
1250 1540 0.031515 TGCCGAGGATTAGGAGGGAA 60.032 55.000 0.00 0.00 0.00 3.97
1283 1575 4.843624 GGTGGAAAACCTCCCTGG 57.156 61.111 0.00 0.00 46.55 4.45
1308 1600 7.919690 AGTAATCAATTACACATCATTCACGG 58.080 34.615 13.76 0.00 43.83 4.94
1309 1601 8.064222 GGAGTAATCAATTACACATCATTCACG 58.936 37.037 13.76 0.00 43.83 4.35
1385 1677 5.634020 GCACCAAGTCTAGTTACTAACACTG 59.366 44.000 4.90 3.69 0.00 3.66
1390 1682 7.713734 ATACAGCACCAAGTCTAGTTACTAA 57.286 36.000 0.00 0.00 0.00 2.24
1442 1734 7.770801 AAGCAAAACTTTCCAAATTACAGTC 57.229 32.000 0.00 0.00 33.71 3.51
1497 1791 0.814457 AAAAGCAACGGTGACAAGCA 59.186 45.000 3.55 0.00 0.00 3.91
1498 1792 1.065551 AGAAAAGCAACGGTGACAAGC 59.934 47.619 3.55 0.00 0.00 4.01
1675 1969 6.015856 GCTTATAGATGACTCTGAGGCTTACA 60.016 42.308 12.54 3.11 32.66 2.41
1746 2040 8.936864 CCTGAAGAAAGTGAGACGTAAAATAAT 58.063 33.333 0.00 0.00 0.00 1.28
1758 2052 4.142730 GCTGCATAACCTGAAGAAAGTGAG 60.143 45.833 0.00 0.00 31.16 3.51
1837 2131 0.804989 AAGCTTACGCCATTGCAGAC 59.195 50.000 0.00 0.00 37.32 3.51
1894 2188 5.282055 TGGCTCACTGAATAGGATAACAG 57.718 43.478 0.00 0.00 35.95 3.16
1946 2240 1.134907 CCACATGGAAATCTGGCTTGC 60.135 52.381 0.00 0.00 37.39 4.01
2090 2384 1.466167 CACTCAAGATGGCCAACTTCG 59.534 52.381 24.23 19.37 0.00 3.79
2123 2417 8.230486 CAGGTGAACTATGTAAACAAGATCAAC 58.770 37.037 0.00 10.05 0.00 3.18
2125 2419 7.450074 ACAGGTGAACTATGTAAACAAGATCA 58.550 34.615 0.00 0.00 0.00 2.92
2196 2491 5.022122 TGCAGGAACAATGGGAAATATGAA 58.978 37.500 0.00 0.00 0.00 2.57
2293 2592 6.729187 ACAAATCTGAACAAGCAGAAAGTAC 58.271 36.000 0.00 0.00 46.94 2.73
2319 2618 0.627469 ATGGCAAGGTATCAGGGGGT 60.627 55.000 0.00 0.00 0.00 4.95
2320 2619 0.178981 CATGGCAAGGTATCAGGGGG 60.179 60.000 0.00 0.00 0.00 5.40
2385 2684 3.559238 AAAACACAAATAGCAGCCTCG 57.441 42.857 0.00 0.00 0.00 4.63
2399 2698 5.438761 ACAGGAACAGATAGCAAAAACAC 57.561 39.130 0.00 0.00 0.00 3.32
2429 2730 5.182190 TGTGCAGGAATAGTTATCGCAAAAA 59.818 36.000 0.00 0.00 0.00 1.94
2430 2731 4.697828 TGTGCAGGAATAGTTATCGCAAAA 59.302 37.500 0.00 0.00 0.00 2.44
2431 2732 4.257731 TGTGCAGGAATAGTTATCGCAAA 58.742 39.130 0.00 0.00 0.00 3.68
2432 2733 3.867857 TGTGCAGGAATAGTTATCGCAA 58.132 40.909 0.00 0.00 0.00 4.85
2433 2734 3.535280 TGTGCAGGAATAGTTATCGCA 57.465 42.857 0.00 0.00 0.00 5.10
2434 2735 5.007626 TCAAATGTGCAGGAATAGTTATCGC 59.992 40.000 0.00 0.00 0.00 4.58
2435 2736 6.603237 TCAAATGTGCAGGAATAGTTATCG 57.397 37.500 0.00 0.00 0.00 2.92
2436 2737 7.283127 TCCTTCAAATGTGCAGGAATAGTTATC 59.717 37.037 1.17 0.00 0.00 1.75
2437 2738 7.067494 GTCCTTCAAATGTGCAGGAATAGTTAT 59.933 37.037 5.77 0.00 0.00 1.89
2438 2739 6.374333 GTCCTTCAAATGTGCAGGAATAGTTA 59.626 38.462 5.77 0.00 0.00 2.24
2439 2740 5.183904 GTCCTTCAAATGTGCAGGAATAGTT 59.816 40.000 5.77 0.00 0.00 2.24
2440 2741 4.702131 GTCCTTCAAATGTGCAGGAATAGT 59.298 41.667 5.77 0.00 0.00 2.12
2441 2742 4.946157 AGTCCTTCAAATGTGCAGGAATAG 59.054 41.667 5.77 0.00 0.00 1.73
2442 2743 4.922206 AGTCCTTCAAATGTGCAGGAATA 58.078 39.130 5.77 0.00 0.00 1.75
2443 2744 3.771216 AGTCCTTCAAATGTGCAGGAAT 58.229 40.909 5.77 1.87 0.00 3.01
2444 2745 3.228188 AGTCCTTCAAATGTGCAGGAA 57.772 42.857 5.77 0.00 0.00 3.36
2445 2746 2.957402 AGTCCTTCAAATGTGCAGGA 57.043 45.000 0.00 0.00 0.00 3.86
2446 2747 4.096984 GGAATAGTCCTTCAAATGTGCAGG 59.903 45.833 0.88 0.00 41.24 4.85
2447 2748 5.240713 GGAATAGTCCTTCAAATGTGCAG 57.759 43.478 0.88 0.00 41.24 4.41
2490 2821 0.694771 TGCCATCTGCCAAGAAGAGT 59.305 50.000 0.00 0.00 40.16 3.24
2599 2930 4.162131 ACCAATGAAACCTGCAAAAGTTCT 59.838 37.500 0.00 0.00 0.00 3.01
2662 2993 1.376942 CTGACCAGAGCCTTGCAGG 60.377 63.158 0.00 0.00 38.80 4.85
2703 3034 4.739716 GCAACAAAACATCACAGTAGGTTG 59.260 41.667 0.00 0.00 36.94 3.77
2773 3104 8.213518 TGCTAATCAAGATGAACCAAGATAAC 57.786 34.615 0.00 0.00 0.00 1.89
2786 3117 5.449107 GCATCACCATTGCTAATCAAGAT 57.551 39.130 0.00 0.00 38.22 2.40
2824 3155 1.741770 GGGTACTGCTGCTTCACCG 60.742 63.158 0.00 0.00 0.00 4.94
2853 3184 4.827284 CGGAAACAGCCATAGGGATTTAAT 59.173 41.667 0.00 0.00 35.59 1.40
2905 3236 3.884895 ACCATGAAGCCATACGATTCAA 58.115 40.909 0.00 0.00 36.59 2.69
2909 3240 4.955811 TTCTACCATGAAGCCATACGAT 57.044 40.909 0.00 0.00 0.00 3.73
2911 3242 4.887748 AGATTCTACCATGAAGCCATACG 58.112 43.478 0.00 0.00 33.33 3.06
2912 3243 6.291377 TGAAGATTCTACCATGAAGCCATAC 58.709 40.000 0.00 0.00 33.33 2.39
2923 3254 8.746052 TCAAAAAGAAACTGAAGATTCTACCA 57.254 30.769 3.58 0.00 36.36 3.25
2924 3255 9.617975 CATCAAAAAGAAACTGAAGATTCTACC 57.382 33.333 3.58 0.00 36.36 3.18
2932 3263 7.701924 TGCTACAACATCAAAAAGAAACTGAAG 59.298 33.333 0.00 0.00 0.00 3.02
2946 3278 3.338249 GCTTCCTTCTGCTACAACATCA 58.662 45.455 0.00 0.00 0.00 3.07
2947 3279 2.680339 GGCTTCCTTCTGCTACAACATC 59.320 50.000 0.00 0.00 0.00 3.06
2948 3280 2.307098 AGGCTTCCTTCTGCTACAACAT 59.693 45.455 0.00 0.00 0.00 2.71
2949 3281 1.699634 AGGCTTCCTTCTGCTACAACA 59.300 47.619 0.00 0.00 0.00 3.33
2959 3291 6.596621 AGGAATAGAACATTAGGCTTCCTTC 58.403 40.000 0.00 0.00 38.20 3.46
3000 3332 6.824253 ACATTTGGATGGAGACGCAAGTTAC 61.824 44.000 0.00 0.00 44.56 2.50
3005 3337 2.198827 ACATTTGGATGGAGACGCAA 57.801 45.000 0.00 0.00 37.60 4.85
3009 3341 7.999679 TCAAATATCAACATTTGGATGGAGAC 58.000 34.615 8.30 0.00 43.22 3.36
3024 3356 9.860898 CTCGAGTGGTATCATATCAAATATCAA 57.139 33.333 3.62 0.00 0.00 2.57
3034 3366 9.658799 CCAATATTTTCTCGAGTGGTATCATAT 57.341 33.333 13.13 3.81 0.00 1.78
3035 3367 8.866093 TCCAATATTTTCTCGAGTGGTATCATA 58.134 33.333 13.13 1.69 0.00 2.15
3036 3368 7.657761 GTCCAATATTTTCTCGAGTGGTATCAT 59.342 37.037 13.13 0.00 0.00 2.45
3043 3375 6.668541 ATGTGTCCAATATTTTCTCGAGTG 57.331 37.500 13.13 0.86 0.00 3.51
3073 3405 5.873164 TCACTCAGATGAACAATGATGACAG 59.127 40.000 0.00 0.00 0.00 3.51
3077 3409 6.980051 TCTTCACTCAGATGAACAATGATG 57.020 37.500 0.00 0.00 34.84 3.07
3078 3410 7.827729 TCATTCTTCACTCAGATGAACAATGAT 59.172 33.333 12.34 0.00 43.31 2.45
3079 3411 7.118825 GTCATTCTTCACTCAGATGAACAATGA 59.881 37.037 12.34 12.34 44.65 2.57
3087 3419 4.081254 TGAGGGTCATTCTTCACTCAGATG 60.081 45.833 0.00 0.00 31.92 2.90
3090 3422 3.859443 CTGAGGGTCATTCTTCACTCAG 58.141 50.000 9.49 9.49 43.81 3.35
3094 3426 4.389374 TCAAACTGAGGGTCATTCTTCAC 58.611 43.478 0.00 0.00 0.00 3.18
3099 3431 3.955471 TGGATCAAACTGAGGGTCATTC 58.045 45.455 0.00 0.00 0.00 2.67
3100 3432 4.387026 TTGGATCAAACTGAGGGTCATT 57.613 40.909 0.00 0.00 0.00 2.57
3146 3491 2.897326 TGGCACAAACTAGAGCTGACTA 59.103 45.455 0.00 0.00 31.92 2.59
3180 3525 8.321716 GCTATAACTGACTTGTCTCAAATTACG 58.678 37.037 2.35 0.00 0.00 3.18
3186 3531 6.935167 TGATGCTATAACTGACTTGTCTCAA 58.065 36.000 2.35 0.00 0.00 3.02
3187 3532 6.530019 TGATGCTATAACTGACTTGTCTCA 57.470 37.500 2.35 0.00 0.00 3.27
3188 3533 7.834068 TTTGATGCTATAACTGACTTGTCTC 57.166 36.000 2.35 0.00 0.00 3.36
3189 3534 8.798859 AATTTGATGCTATAACTGACTTGTCT 57.201 30.769 2.35 0.00 0.00 3.41
3202 3547 8.944029 GTGACAGATGCTATAATTTGATGCTAT 58.056 33.333 0.00 0.00 0.00 2.97
3203 3548 8.152898 AGTGACAGATGCTATAATTTGATGCTA 58.847 33.333 0.00 0.00 0.00 3.49
3204 3549 6.996879 AGTGACAGATGCTATAATTTGATGCT 59.003 34.615 0.00 0.00 0.00 3.79
3205 3550 7.199541 AGTGACAGATGCTATAATTTGATGC 57.800 36.000 0.00 0.00 0.00 3.91
3208 3553 8.461222 CCAAAAGTGACAGATGCTATAATTTGA 58.539 33.333 0.00 0.00 0.00 2.69
3209 3554 7.221452 GCCAAAAGTGACAGATGCTATAATTTG 59.779 37.037 0.00 0.00 0.00 2.32
3210 3555 7.260603 GCCAAAAGTGACAGATGCTATAATTT 58.739 34.615 0.00 0.00 0.00 1.82
3211 3556 6.458751 CGCCAAAAGTGACAGATGCTATAATT 60.459 38.462 0.00 0.00 0.00 1.40
3212 3557 5.008019 CGCCAAAAGTGACAGATGCTATAAT 59.992 40.000 0.00 0.00 0.00 1.28
3213 3558 4.332543 CGCCAAAAGTGACAGATGCTATAA 59.667 41.667 0.00 0.00 0.00 0.98
3214 3559 3.871006 CGCCAAAAGTGACAGATGCTATA 59.129 43.478 0.00 0.00 0.00 1.31
3215 3560 2.679837 CGCCAAAAGTGACAGATGCTAT 59.320 45.455 0.00 0.00 0.00 2.97
3216 3561 2.076100 CGCCAAAAGTGACAGATGCTA 58.924 47.619 0.00 0.00 0.00 3.49
3217 3562 0.877071 CGCCAAAAGTGACAGATGCT 59.123 50.000 0.00 0.00 0.00 3.79
3218 3563 0.874390 TCGCCAAAAGTGACAGATGC 59.126 50.000 0.00 0.00 0.00 3.91
3219 3564 2.146342 ACTCGCCAAAAGTGACAGATG 58.854 47.619 0.00 0.00 0.00 2.90
3220 3565 2.550830 ACTCGCCAAAAGTGACAGAT 57.449 45.000 0.00 0.00 0.00 2.90
3221 3566 2.364324 AGTACTCGCCAAAAGTGACAGA 59.636 45.455 0.00 0.00 0.00 3.41
3222 3567 2.731976 GAGTACTCGCCAAAAGTGACAG 59.268 50.000 7.22 0.00 0.00 3.51
3223 3568 2.547218 GGAGTACTCGCCAAAAGTGACA 60.547 50.000 16.56 0.00 33.68 3.58
3224 3569 2.067013 GGAGTACTCGCCAAAAGTGAC 58.933 52.381 16.56 0.00 33.68 3.67
3225 3570 1.001633 GGGAGTACTCGCCAAAAGTGA 59.998 52.381 25.39 0.00 36.65 3.41
3226 3571 1.002087 AGGGAGTACTCGCCAAAAGTG 59.998 52.381 30.19 0.00 42.72 3.16
3227 3572 1.275573 GAGGGAGTACTCGCCAAAAGT 59.724 52.381 30.19 15.02 42.72 2.66
3228 3573 1.550976 AGAGGGAGTACTCGCCAAAAG 59.449 52.381 30.19 0.00 42.72 2.27
3229 3574 1.275291 CAGAGGGAGTACTCGCCAAAA 59.725 52.381 30.19 0.00 42.72 2.44
3230 3575 0.895530 CAGAGGGAGTACTCGCCAAA 59.104 55.000 30.19 0.00 42.72 3.28
3231 3576 0.251653 ACAGAGGGAGTACTCGCCAA 60.252 55.000 30.19 0.00 42.72 4.52
3232 3577 0.622136 TACAGAGGGAGTACTCGCCA 59.378 55.000 30.19 12.36 42.72 5.69
3233 3578 1.881324 GATACAGAGGGAGTACTCGCC 59.119 57.143 30.19 23.77 42.72 5.54
3234 3579 2.573369 TGATACAGAGGGAGTACTCGC 58.427 52.381 27.68 27.68 42.31 5.03
3235 3580 5.578005 TTTTGATACAGAGGGAGTACTCG 57.422 43.478 16.56 5.07 42.31 4.18
3240 3585 8.652290 GGTCTTATATTTTGATACAGAGGGAGT 58.348 37.037 0.00 0.00 0.00 3.85
3241 3586 8.875168 AGGTCTTATATTTTGATACAGAGGGAG 58.125 37.037 0.00 0.00 0.00 4.30
3242 3587 8.798975 AGGTCTTATATTTTGATACAGAGGGA 57.201 34.615 0.00 0.00 0.00 4.20
3243 3588 9.853177 AAAGGTCTTATATTTTGATACAGAGGG 57.147 33.333 0.00 0.00 0.00 4.30
3278 3623 7.645058 TTGACACTGATACACTGATAGATCA 57.355 36.000 0.00 0.00 35.16 2.92
3279 3624 8.932945 TTTTGACACTGATACACTGATAGATC 57.067 34.615 0.00 0.00 0.00 2.75
3302 3647 9.907229 CTCCCTCTGTAAATATAAGACCTTTTT 57.093 33.333 0.00 0.00 0.00 1.94
3303 3648 9.059023 ACTCCCTCTGTAAATATAAGACCTTTT 57.941 33.333 0.00 0.00 0.00 2.27
3304 3649 8.625467 ACTCCCTCTGTAAATATAAGACCTTT 57.375 34.615 0.00 0.00 0.00 3.11
3305 3650 9.725206 TTACTCCCTCTGTAAATATAAGACCTT 57.275 33.333 0.00 0.00 0.00 3.50
3306 3651 9.900112 ATTACTCCCTCTGTAAATATAAGACCT 57.100 33.333 0.00 0.00 34.20 3.85
3318 3663 9.886132 GAACTCATAAAAATTACTCCCTCTGTA 57.114 33.333 0.00 0.00 0.00 2.74
3319 3664 7.829706 GGAACTCATAAAAATTACTCCCTCTGT 59.170 37.037 0.00 0.00 0.00 3.41
3320 3665 7.829211 TGGAACTCATAAAAATTACTCCCTCTG 59.171 37.037 0.00 0.00 0.00 3.35
3321 3666 7.829706 GTGGAACTCATAAAAATTACTCCCTCT 59.170 37.037 0.00 0.00 0.00 3.69
3322 3667 7.986562 GTGGAACTCATAAAAATTACTCCCTC 58.013 38.462 0.00 0.00 0.00 4.30
3323 3668 7.939784 GTGGAACTCATAAAAATTACTCCCT 57.060 36.000 0.00 0.00 0.00 4.20
3341 3686 1.172812 GGCACTGGTGGAAGTGGAAC 61.173 60.000 6.48 0.00 46.34 3.62
3342 3687 1.150536 GGCACTGGTGGAAGTGGAA 59.849 57.895 6.48 0.00 46.34 3.53
3343 3688 1.770110 AGGCACTGGTGGAAGTGGA 60.770 57.895 6.48 0.00 46.34 4.02
3344 3689 2.839098 AGGCACTGGTGGAAGTGG 59.161 61.111 6.48 0.00 46.34 4.00
3354 3699 6.365636 TGACAGTATCACCTTCAGGCACTG 62.366 50.000 12.56 12.56 45.90 3.66
3355 3700 2.234908 GACAGTATCACCTTCAGGCACT 59.765 50.000 0.00 0.00 43.88 4.40
3356 3701 2.028112 TGACAGTATCACCTTCAGGCAC 60.028 50.000 0.00 0.00 39.32 5.01
3357 3702 2.256306 TGACAGTATCACCTTCAGGCA 58.744 47.619 0.00 0.00 39.32 4.75
3367 3712 0.678684 TCGCGGGAGTGACAGTATCA 60.679 55.000 6.13 0.00 45.79 2.15
3368 3713 0.029567 CTCGCGGGAGTGACAGTATC 59.970 60.000 20.59 0.00 45.79 2.24
3369 3714 2.005960 GCTCGCGGGAGTGACAGTAT 62.006 60.000 27.73 0.00 45.79 2.12
3370 3715 2.697761 GCTCGCGGGAGTGACAGTA 61.698 63.158 27.73 0.00 45.79 2.74
3371 3716 4.057428 GCTCGCGGGAGTGACAGT 62.057 66.667 27.73 0.00 45.79 3.55
3377 3722 3.203412 CTAGACGCTCGCGGGAGT 61.203 66.667 27.73 17.44 42.53 3.85
3378 3723 3.955101 CCTAGACGCTCGCGGGAG 61.955 72.222 24.07 24.07 44.69 4.30
3379 3724 3.390183 TACCTAGACGCTCGCGGGA 62.390 63.158 12.03 0.92 44.69 5.14
3380 3725 2.894565 CTACCTAGACGCTCGCGGG 61.895 68.421 16.18 2.60 44.69 6.13
3381 3726 2.632541 CTACCTAGACGCTCGCGG 59.367 66.667 16.18 0.00 44.69 6.46
3382 3727 2.632541 CCTACCTAGACGCTCGCG 59.367 66.667 10.06 10.06 46.03 5.87
3383 3728 2.332159 GCCTACCTAGACGCTCGC 59.668 66.667 0.00 0.00 0.00 5.03
3384 3729 1.229315 ATCGCCTACCTAGACGCTCG 61.229 60.000 0.00 0.00 0.00 5.03
3385 3730 0.518195 GATCGCCTACCTAGACGCTC 59.482 60.000 0.00 0.00 0.00 5.03
3386 3731 0.890090 GGATCGCCTACCTAGACGCT 60.890 60.000 0.00 0.00 0.00 5.07
3387 3732 1.170919 TGGATCGCCTACCTAGACGC 61.171 60.000 0.00 0.00 34.31 5.19
3388 3733 0.592148 GTGGATCGCCTACCTAGACG 59.408 60.000 0.00 0.00 34.31 4.18
3389 3734 0.592148 CGTGGATCGCCTACCTAGAC 59.408 60.000 0.00 0.00 34.31 2.59
3390 3735 0.182061 ACGTGGATCGCCTACCTAGA 59.818 55.000 0.00 0.00 44.19 2.43
3391 3736 0.592148 GACGTGGATCGCCTACCTAG 59.408 60.000 0.00 0.00 44.19 3.02
3392 3737 0.182061 AGACGTGGATCGCCTACCTA 59.818 55.000 0.00 0.00 44.19 3.08
3393 3738 1.076923 AGACGTGGATCGCCTACCT 60.077 57.895 0.00 0.00 44.19 3.08
3394 3739 1.359475 GAGACGTGGATCGCCTACC 59.641 63.158 0.00 0.00 44.19 3.18
3395 3740 1.009900 CGAGACGTGGATCGCCTAC 60.010 63.158 0.00 0.00 44.19 3.18
3396 3741 3.417601 CGAGACGTGGATCGCCTA 58.582 61.111 0.00 0.00 44.19 3.93
3400 3745 2.580470 GCATGCGAGACGTGGATCG 61.580 63.158 0.00 0.54 46.00 3.69
3401 3746 2.580470 CGCATGCGAGACGTGGATC 61.580 63.158 35.82 0.00 42.83 3.36
3402 3747 2.583319 CGCATGCGAGACGTGGAT 60.583 61.111 35.82 0.00 42.83 3.41
3457 3802 4.124943 AGCGGCGTCTAGGGGAGA 62.125 66.667 9.37 0.00 0.00 3.71
3458 3803 3.905678 CAGCGGCGTCTAGGGGAG 61.906 72.222 9.37 0.00 0.00 4.30
3470 3815 2.728443 GATCTCCATGGAGGCAGCGG 62.728 65.000 35.95 14.54 42.20 5.52
3471 3816 1.301558 GATCTCCATGGAGGCAGCG 60.302 63.158 35.95 15.26 42.20 5.18
3472 3817 1.301558 CGATCTCCATGGAGGCAGC 60.302 63.158 35.95 22.29 42.20 5.25
3473 3818 1.370437 CCGATCTCCATGGAGGCAG 59.630 63.158 35.95 26.10 42.20 4.85
3474 3819 2.811514 GCCGATCTCCATGGAGGCA 61.812 63.158 35.95 21.84 42.20 4.75
3475 3820 2.031768 GCCGATCTCCATGGAGGC 59.968 66.667 35.95 29.27 42.20 4.70
3476 3821 1.840650 AGGCCGATCTCCATGGAGG 60.841 63.158 35.95 24.42 42.20 4.30
3477 3822 1.370437 CAGGCCGATCTCCATGGAG 59.630 63.158 32.60 32.60 43.21 3.86
3478 3823 2.811514 GCAGGCCGATCTCCATGGA 61.812 63.158 15.27 15.27 0.00 3.41
3479 3824 2.281345 GCAGGCCGATCTCCATGG 60.281 66.667 4.97 4.97 0.00 3.66
3480 3825 2.664185 CGCAGGCCGATCTCCATG 60.664 66.667 0.00 0.00 40.02 3.66
3481 3826 2.839632 TCGCAGGCCGATCTCCAT 60.840 61.111 0.00 0.00 41.89 3.41
3482 3827 3.531207 CTCGCAGGCCGATCTCCA 61.531 66.667 0.00 0.00 46.31 3.86
3483 3828 4.959596 GCTCGCAGGCCGATCTCC 62.960 72.222 0.00 0.00 46.31 3.71
3484 3829 3.910490 AGCTCGCAGGCCGATCTC 61.910 66.667 0.00 0.00 46.31 2.75
3485 3830 4.218578 CAGCTCGCAGGCCGATCT 62.219 66.667 0.00 0.00 46.31 2.75
3552 3897 1.005340 CTCCAAGAGAAGCATCACGC 58.995 55.000 0.00 0.00 42.91 5.34
3553 3898 1.649664 CCTCCAAGAGAAGCATCACG 58.350 55.000 0.00 0.00 0.00 4.35
3554 3899 1.556911 TCCCTCCAAGAGAAGCATCAC 59.443 52.381 0.00 0.00 0.00 3.06
3555 3900 1.556911 GTCCCTCCAAGAGAAGCATCA 59.443 52.381 0.00 0.00 0.00 3.07
3556 3901 1.472376 CGTCCCTCCAAGAGAAGCATC 60.472 57.143 0.00 0.00 0.00 3.91
3557 3902 0.539051 CGTCCCTCCAAGAGAAGCAT 59.461 55.000 0.00 0.00 0.00 3.79
3558 3903 1.544825 CCGTCCCTCCAAGAGAAGCA 61.545 60.000 0.00 0.00 0.00 3.91
3559 3904 1.219393 CCGTCCCTCCAAGAGAAGC 59.781 63.158 0.00 0.00 0.00 3.86
3560 3905 0.533032 GTCCGTCCCTCCAAGAGAAG 59.467 60.000 0.00 0.00 0.00 2.85
3561 3906 1.248785 CGTCCGTCCCTCCAAGAGAA 61.249 60.000 0.00 0.00 0.00 2.87
3562 3907 1.677966 CGTCCGTCCCTCCAAGAGA 60.678 63.158 0.00 0.00 0.00 3.10
3563 3908 2.885861 CGTCCGTCCCTCCAAGAG 59.114 66.667 0.00 0.00 0.00 2.85
3564 3909 3.379445 GCGTCCGTCCCTCCAAGA 61.379 66.667 0.00 0.00 0.00 3.02
3565 3910 3.382832 AGCGTCCGTCCCTCCAAG 61.383 66.667 0.00 0.00 0.00 3.61
3566 3911 3.691342 CAGCGTCCGTCCCTCCAA 61.691 66.667 0.00 0.00 0.00 3.53
3576 3921 3.423154 CAAACTCCGGCAGCGTCC 61.423 66.667 0.00 0.00 0.00 4.79
3577 3922 3.423154 CCAAACTCCGGCAGCGTC 61.423 66.667 0.00 0.00 0.00 5.19
3587 3932 1.604915 GAGGGAGGGAGCCAAACTC 59.395 63.158 0.00 0.00 45.45 3.01
3588 3933 1.925972 GGAGGGAGGGAGCCAAACT 60.926 63.158 0.00 0.00 0.00 2.66
3589 3934 1.575447 ATGGAGGGAGGGAGCCAAAC 61.575 60.000 0.00 0.00 33.51 2.93
3590 3935 1.230281 ATGGAGGGAGGGAGCCAAA 60.230 57.895 0.00 0.00 33.51 3.28
3591 3936 1.694169 GATGGAGGGAGGGAGCCAA 60.694 63.158 0.00 0.00 33.51 4.52
3592 3937 2.040464 GATGGAGGGAGGGAGCCA 60.040 66.667 0.00 0.00 34.45 4.75
3593 3938 1.841103 GAGATGGAGGGAGGGAGCC 60.841 68.421 0.00 0.00 0.00 4.70
3594 3939 1.841103 GGAGATGGAGGGAGGGAGC 60.841 68.421 0.00 0.00 0.00 4.70
3595 3940 0.267356 AAGGAGATGGAGGGAGGGAG 59.733 60.000 0.00 0.00 0.00 4.30
3596 3941 0.266152 GAAGGAGATGGAGGGAGGGA 59.734 60.000 0.00 0.00 0.00 4.20
3597 3942 1.118356 CGAAGGAGATGGAGGGAGGG 61.118 65.000 0.00 0.00 0.00 4.30
3598 3943 1.753368 GCGAAGGAGATGGAGGGAGG 61.753 65.000 0.00 0.00 0.00 4.30
3599 3944 1.745264 GCGAAGGAGATGGAGGGAG 59.255 63.158 0.00 0.00 0.00 4.30
3600 3945 2.127869 CGCGAAGGAGATGGAGGGA 61.128 63.158 0.00 0.00 0.00 4.20
3601 3946 2.356818 GACGCGAAGGAGATGGAGGG 62.357 65.000 15.93 0.00 0.00 4.30
3602 3947 1.066587 GACGCGAAGGAGATGGAGG 59.933 63.158 15.93 0.00 0.00 4.30
3603 3948 1.298713 CGACGCGAAGGAGATGGAG 60.299 63.158 15.93 0.00 0.00 3.86
3604 3949 1.310216 TTCGACGCGAAGGAGATGGA 61.310 55.000 15.93 0.00 41.05 3.41
3605 3950 1.138883 TTCGACGCGAAGGAGATGG 59.861 57.895 15.93 0.00 41.05 3.51
3606 3951 4.785950 TTCGACGCGAAGGAGATG 57.214 55.556 15.93 0.00 41.05 2.90
3613 3958 2.875485 CTCCTCCTTCGACGCGAA 59.125 61.111 15.93 12.72 43.75 4.70
3614 3959 3.812019 GCTCCTCCTTCGACGCGA 61.812 66.667 15.93 0.00 0.00 5.87
3615 3960 3.816524 AGCTCCTCCTTCGACGCG 61.817 66.667 3.53 3.53 0.00 6.01
3616 3961 2.202676 CAGCTCCTCCTTCGACGC 60.203 66.667 0.00 0.00 0.00 5.19
3617 3962 2.202676 GCAGCTCCTCCTTCGACG 60.203 66.667 0.00 0.00 0.00 5.12
3618 3963 1.140804 GAGCAGCTCCTCCTTCGAC 59.859 63.158 11.84 0.00 0.00 4.20
3619 3964 0.613292 AAGAGCAGCTCCTCCTTCGA 60.613 55.000 19.40 0.00 32.17 3.71
3620 3965 0.459934 CAAGAGCAGCTCCTCCTTCG 60.460 60.000 19.40 0.00 32.17 3.79
3621 3966 0.107752 CCAAGAGCAGCTCCTCCTTC 60.108 60.000 19.40 0.00 32.17 3.46
3622 3967 1.989620 CCAAGAGCAGCTCCTCCTT 59.010 57.895 19.40 3.70 32.17 3.36
3623 3968 2.668120 GCCAAGAGCAGCTCCTCCT 61.668 63.158 19.40 0.00 42.97 3.69
3624 3969 2.124778 GCCAAGAGCAGCTCCTCC 60.125 66.667 19.40 1.60 42.97 4.30
3625 3970 2.511145 CGCCAAGAGCAGCTCCTC 60.511 66.667 19.40 0.00 44.04 3.71
3626 3971 3.308014 GACGCCAAGAGCAGCTCCT 62.308 63.158 19.40 2.59 44.04 3.69
3627 3972 2.817396 GACGCCAAGAGCAGCTCC 60.817 66.667 19.40 2.46 44.04 4.70
3628 3973 3.184683 CGACGCCAAGAGCAGCTC 61.185 66.667 15.25 15.25 44.04 4.09
3660 4005 4.821589 GTGGAGGCGGCGAGGAAG 62.822 72.222 12.98 0.00 0.00 3.46
3673 4018 3.315142 GCAGCATGGACGGAGTGGA 62.315 63.158 0.00 0.00 37.53 4.02
3674 4019 2.821366 GCAGCATGGACGGAGTGG 60.821 66.667 0.00 0.00 37.53 4.00
3675 4020 3.190849 CGCAGCATGGACGGAGTG 61.191 66.667 0.00 0.00 37.53 3.51
3676 4021 3.649277 GACGCAGCATGGACGGAGT 62.649 63.158 0.00 0.00 40.45 3.85
3677 4022 2.887568 GACGCAGCATGGACGGAG 60.888 66.667 0.00 0.00 35.86 4.63
3678 4023 4.794439 CGACGCAGCATGGACGGA 62.794 66.667 0.00 0.00 35.86 4.69
3680 4025 3.545481 GACGACGCAGCATGGACG 61.545 66.667 0.00 0.00 35.86 4.79
3681 4026 3.545481 CGACGACGCAGCATGGAC 61.545 66.667 0.00 0.00 35.86 4.02
3682 4027 4.794439 CCGACGACGCAGCATGGA 62.794 66.667 0.64 0.00 38.29 3.41
3695 4040 3.959991 GAAGTCCCAGCCAGCCGAC 62.960 68.421 0.00 0.00 0.00 4.79
3696 4041 3.706373 GAAGTCCCAGCCAGCCGA 61.706 66.667 0.00 0.00 0.00 5.54
3703 4048 4.821589 CGGAGGCGAAGTCCCAGC 62.822 72.222 0.00 0.00 0.00 4.85
3704 4049 4.821589 GCGGAGGCGAAGTCCCAG 62.822 72.222 0.00 0.00 0.00 4.45
3706 4051 4.083862 AAGCGGAGGCGAAGTCCC 62.084 66.667 0.00 0.00 46.35 4.46
3707 4052 2.508586 AAGAAGCGGAGGCGAAGTCC 62.509 60.000 0.00 0.00 46.35 3.85
3708 4053 1.079317 GAAGAAGCGGAGGCGAAGTC 61.079 60.000 0.00 0.00 46.35 3.01
3709 4054 1.079750 GAAGAAGCGGAGGCGAAGT 60.080 57.895 0.00 0.00 46.35 3.01
3710 4055 2.161486 CGAAGAAGCGGAGGCGAAG 61.161 63.158 0.00 0.00 46.35 3.79
3711 4056 2.126071 CGAAGAAGCGGAGGCGAA 60.126 61.111 0.00 0.00 46.35 4.70
3737 4082 1.134670 AGTAGTGAAGAAGGGCATCGC 60.135 52.381 0.00 0.00 0.00 4.58
3738 4083 2.796383 CGAGTAGTGAAGAAGGGCATCG 60.796 54.545 0.00 0.00 0.00 3.84
3739 4084 2.815478 CGAGTAGTGAAGAAGGGCATC 58.185 52.381 0.00 0.00 0.00 3.91
3740 4085 1.134670 GCGAGTAGTGAAGAAGGGCAT 60.135 52.381 0.00 0.00 0.00 4.40
3741 4086 0.246635 GCGAGTAGTGAAGAAGGGCA 59.753 55.000 0.00 0.00 0.00 5.36
3742 4087 0.533032 AGCGAGTAGTGAAGAAGGGC 59.467 55.000 0.00 0.00 0.00 5.19
3743 4088 1.819288 TCAGCGAGTAGTGAAGAAGGG 59.181 52.381 0.00 0.00 0.00 3.95
3744 4089 2.490115 AGTCAGCGAGTAGTGAAGAAGG 59.510 50.000 0.00 0.00 0.00 3.46
3745 4090 3.189495 TGAGTCAGCGAGTAGTGAAGAAG 59.811 47.826 0.00 0.00 0.00 2.85
3746 4091 3.146847 TGAGTCAGCGAGTAGTGAAGAA 58.853 45.455 0.00 0.00 0.00 2.52
3747 4092 2.744741 CTGAGTCAGCGAGTAGTGAAGA 59.255 50.000 7.33 0.00 0.00 2.87
3748 4093 2.486203 ACTGAGTCAGCGAGTAGTGAAG 59.514 50.000 20.31 0.00 34.37 3.02
3749 4094 2.505405 ACTGAGTCAGCGAGTAGTGAA 58.495 47.619 20.31 0.00 34.37 3.18
3750 4095 2.186532 ACTGAGTCAGCGAGTAGTGA 57.813 50.000 20.31 0.00 34.37 3.41
3751 4096 2.486203 AGAACTGAGTCAGCGAGTAGTG 59.514 50.000 20.31 0.00 34.37 2.74
3752 4097 2.745281 GAGAACTGAGTCAGCGAGTAGT 59.255 50.000 20.31 0.00 34.37 2.73
3753 4098 2.096819 GGAGAACTGAGTCAGCGAGTAG 59.903 54.545 20.31 0.00 34.37 2.57
3754 4099 2.085320 GGAGAACTGAGTCAGCGAGTA 58.915 52.381 20.31 0.00 34.37 2.59
3755 4100 0.885196 GGAGAACTGAGTCAGCGAGT 59.115 55.000 20.31 3.01 34.37 4.18
3756 4101 1.132262 GAGGAGAACTGAGTCAGCGAG 59.868 57.143 20.31 0.00 34.37 5.03
3757 4102 1.169577 GAGGAGAACTGAGTCAGCGA 58.830 55.000 20.31 0.00 34.37 4.93
3758 4103 0.179176 CGAGGAGAACTGAGTCAGCG 60.179 60.000 20.31 9.62 34.37 5.18
3759 4104 0.457681 GCGAGGAGAACTGAGTCAGC 60.458 60.000 20.31 4.84 34.37 4.26
3760 4105 0.172352 GGCGAGGAGAACTGAGTCAG 59.828 60.000 18.83 18.83 37.52 3.51
3761 4106 1.587043 CGGCGAGGAGAACTGAGTCA 61.587 60.000 0.00 0.00 0.00 3.41
3762 4107 1.137825 CGGCGAGGAGAACTGAGTC 59.862 63.158 0.00 0.00 0.00 3.36
3763 4108 2.344203 CCGGCGAGGAGAACTGAGT 61.344 63.158 9.30 0.00 45.00 3.41
3764 4109 1.030488 TACCGGCGAGGAGAACTGAG 61.030 60.000 9.30 0.00 45.00 3.35
3765 4110 0.395311 ATACCGGCGAGGAGAACTGA 60.395 55.000 9.30 0.00 45.00 3.41
3766 4111 0.249073 CATACCGGCGAGGAGAACTG 60.249 60.000 9.30 0.00 45.00 3.16
3767 4112 0.683504 ACATACCGGCGAGGAGAACT 60.684 55.000 9.30 0.00 45.00 3.01
3768 4113 0.175073 AACATACCGGCGAGGAGAAC 59.825 55.000 9.30 0.00 45.00 3.01
3769 4114 0.899720 AAACATACCGGCGAGGAGAA 59.100 50.000 9.30 0.00 45.00 2.87
3770 4115 0.458669 GAAACATACCGGCGAGGAGA 59.541 55.000 9.30 0.00 45.00 3.71
3771 4116 0.529992 GGAAACATACCGGCGAGGAG 60.530 60.000 9.30 0.00 45.00 3.69
3772 4117 1.518774 GGAAACATACCGGCGAGGA 59.481 57.895 9.30 0.00 45.00 3.71
3774 4119 0.529992 GAGGGAAACATACCGGCGAG 60.530 60.000 9.30 0.06 0.00 5.03
3775 4120 0.974010 AGAGGGAAACATACCGGCGA 60.974 55.000 9.30 0.00 0.00 5.54
3776 4121 0.529992 GAGAGGGAAACATACCGGCG 60.530 60.000 0.00 0.00 0.00 6.46
3777 4122 0.539986 TGAGAGGGAAACATACCGGC 59.460 55.000 0.00 0.00 0.00 6.13
3778 4123 1.831736 AGTGAGAGGGAAACATACCGG 59.168 52.381 0.00 0.00 0.00 5.28
3779 4124 2.159085 GGAGTGAGAGGGAAACATACCG 60.159 54.545 0.00 0.00 0.00 4.02
3780 4125 2.159085 CGGAGTGAGAGGGAAACATACC 60.159 54.545 0.00 0.00 0.00 2.73
3781 4126 2.159085 CCGGAGTGAGAGGGAAACATAC 60.159 54.545 0.00 0.00 0.00 2.39
3782 4127 2.108168 CCGGAGTGAGAGGGAAACATA 58.892 52.381 0.00 0.00 0.00 2.29
3783 4128 0.905357 CCGGAGTGAGAGGGAAACAT 59.095 55.000 0.00 0.00 0.00 2.71
3784 4129 1.827399 GCCGGAGTGAGAGGGAAACA 61.827 60.000 5.05 0.00 0.00 2.83
3785 4130 1.079057 GCCGGAGTGAGAGGGAAAC 60.079 63.158 5.05 0.00 0.00 2.78
3786 4131 2.646175 CGCCGGAGTGAGAGGGAAA 61.646 63.158 5.05 0.00 0.00 3.13
3787 4132 3.068691 CGCCGGAGTGAGAGGGAA 61.069 66.667 5.05 0.00 0.00 3.97
3803 4148 4.933064 GAGATGTCGAGGCCGGCG 62.933 72.222 22.54 13.90 44.62 6.46
3804 4149 4.593864 GGAGATGTCGAGGCCGGC 62.594 72.222 21.18 21.18 41.51 6.13
3805 4150 4.271816 CGGAGATGTCGAGGCCGG 62.272 72.222 0.00 0.00 38.40 6.13
3806 4151 4.271816 CCGGAGATGTCGAGGCCG 62.272 72.222 0.00 0.00 41.53 6.13
3807 4152 1.749334 AATCCGGAGATGTCGAGGCC 61.749 60.000 11.34 0.00 31.29 5.19
3808 4153 0.105039 AAATCCGGAGATGTCGAGGC 59.895 55.000 11.34 0.00 31.29 4.70
3809 4154 1.539065 CCAAATCCGGAGATGTCGAGG 60.539 57.143 11.34 0.00 31.29 4.63
3810 4155 1.137086 ACCAAATCCGGAGATGTCGAG 59.863 52.381 11.34 1.27 31.29 4.04
3811 4156 1.191535 ACCAAATCCGGAGATGTCGA 58.808 50.000 11.34 0.00 31.29 4.20
3812 4157 2.882927 TACCAAATCCGGAGATGTCG 57.117 50.000 11.34 2.33 31.29 4.35
3813 4158 3.403038 CCATACCAAATCCGGAGATGTC 58.597 50.000 11.34 0.00 31.29 3.06
3814 4159 2.106511 CCCATACCAAATCCGGAGATGT 59.893 50.000 11.34 7.11 31.29 3.06
3815 4160 2.106511 ACCCATACCAAATCCGGAGATG 59.893 50.000 11.34 11.37 31.29 2.90
3816 4161 2.372172 GACCCATACCAAATCCGGAGAT 59.628 50.000 11.34 0.00 0.00 2.75
3817 4162 1.766496 GACCCATACCAAATCCGGAGA 59.234 52.381 11.34 0.00 0.00 3.71
3818 4163 1.202770 GGACCCATACCAAATCCGGAG 60.203 57.143 11.34 0.00 0.00 4.63
3819 4164 0.841289 GGACCCATACCAAATCCGGA 59.159 55.000 6.61 6.61 0.00 5.14
3820 4165 0.548989 TGGACCCATACCAAATCCGG 59.451 55.000 0.00 0.00 34.25 5.14
3821 4166 2.297701 CTTGGACCCATACCAAATCCG 58.702 52.381 0.00 0.00 45.05 4.18
3822 4167 3.023832 CACTTGGACCCATACCAAATCC 58.976 50.000 0.00 0.00 45.05 3.01
3823 4168 3.697166 ACACTTGGACCCATACCAAATC 58.303 45.455 0.00 0.00 45.05 2.17
3824 4169 3.825908 ACACTTGGACCCATACCAAAT 57.174 42.857 0.00 0.00 45.05 2.32
3825 4170 3.226777 CAACACTTGGACCCATACCAAA 58.773 45.455 0.00 0.00 45.05 3.28
3826 4171 2.870175 CAACACTTGGACCCATACCAA 58.130 47.619 0.00 0.00 43.84 3.67
3827 4172 1.546773 GCAACACTTGGACCCATACCA 60.547 52.381 0.00 0.00 35.47 3.25
3828 4173 1.173913 GCAACACTTGGACCCATACC 58.826 55.000 0.00 0.00 0.00 2.73
3829 4174 1.812571 CAGCAACACTTGGACCCATAC 59.187 52.381 0.00 0.00 0.00 2.39
3830 4175 1.886222 GCAGCAACACTTGGACCCATA 60.886 52.381 0.00 0.00 0.00 2.74
3831 4176 1.181098 GCAGCAACACTTGGACCCAT 61.181 55.000 0.00 0.00 0.00 4.00
3832 4177 1.827789 GCAGCAACACTTGGACCCA 60.828 57.895 0.00 0.00 0.00 4.51
3833 4178 2.564721 GGCAGCAACACTTGGACCC 61.565 63.158 0.00 0.00 0.00 4.46
3834 4179 2.908073 CGGCAGCAACACTTGGACC 61.908 63.158 0.00 0.00 0.00 4.46
3835 4180 2.117941 GACGGCAGCAACACTTGGAC 62.118 60.000 0.00 0.00 0.00 4.02
3836 4181 1.891919 GACGGCAGCAACACTTGGA 60.892 57.895 0.00 0.00 0.00 3.53
3837 4182 2.639286 GACGGCAGCAACACTTGG 59.361 61.111 0.00 0.00 0.00 3.61
3838 4183 2.249309 CGACGGCAGCAACACTTG 59.751 61.111 0.00 0.00 0.00 3.16
3839 4184 3.649986 GCGACGGCAGCAACACTT 61.650 61.111 0.00 0.00 39.62 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.