Multiple sequence alignment - TraesCS3B01G195800
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3B01G195800 | chr3B | 100.000 | 4614 | 0 | 0 | 1 | 4614 | 222244875 | 222249488 | 0.000000e+00 | 8521.0 |
1 | TraesCS3B01G195800 | chr3A | 92.760 | 3398 | 133 | 47 | 3 | 3347 | 179538646 | 179535309 | 0.000000e+00 | 4807.0 |
2 | TraesCS3B01G195800 | chr3A | 93.276 | 937 | 46 | 6 | 3374 | 4308 | 179535309 | 179534388 | 0.000000e+00 | 1365.0 |
3 | TraesCS3B01G195800 | chr3A | 92.857 | 294 | 19 | 2 | 4319 | 4612 | 496598413 | 496598704 | 4.270000e-115 | 425.0 |
4 | TraesCS3B01G195800 | chr3D | 94.589 | 1848 | 82 | 6 | 2279 | 4109 | 151439075 | 151440921 | 0.000000e+00 | 2843.0 |
5 | TraesCS3B01G195800 | chr3D | 87.338 | 1698 | 125 | 42 | 601 | 2249 | 151437419 | 151439075 | 0.000000e+00 | 1862.0 |
6 | TraesCS3B01G195800 | chr3D | 89.298 | 570 | 22 | 13 | 1 | 564 | 151436876 | 151437412 | 0.000000e+00 | 678.0 |
7 | TraesCS3B01G195800 | chr3D | 95.935 | 123 | 4 | 1 | 4100 | 4222 | 151440944 | 151441065 | 1.010000e-46 | 198.0 |
8 | TraesCS3B01G195800 | chr3D | 95.775 | 71 | 3 | 0 | 4208 | 4278 | 151441085 | 151441155 | 1.050000e-21 | 115.0 |
9 | TraesCS3B01G195800 | chr3D | 100.000 | 45 | 0 | 0 | 4264 | 4308 | 151441394 | 151441438 | 2.960000e-12 | 84.2 |
10 | TraesCS3B01G195800 | chr3D | 97.368 | 38 | 1 | 0 | 1299 | 1336 | 429303004 | 429303041 | 1.070000e-06 | 65.8 |
11 | TraesCS3B01G195800 | chrUn | 98.973 | 292 | 3 | 0 | 4323 | 4614 | 2465261 | 2465552 | 1.470000e-144 | 523.0 |
12 | TraesCS3B01G195800 | chr1B | 98.973 | 292 | 3 | 0 | 4323 | 4614 | 14988196 | 14988487 | 1.470000e-144 | 523.0 |
13 | TraesCS3B01G195800 | chr1B | 98.649 | 296 | 3 | 1 | 4319 | 4614 | 301296079 | 301295785 | 1.470000e-144 | 523.0 |
14 | TraesCS3B01G195800 | chr1B | 95.946 | 296 | 11 | 1 | 4319 | 4614 | 419275354 | 419275648 | 3.230000e-131 | 479.0 |
15 | TraesCS3B01G195800 | chr1B | 89.552 | 335 | 26 | 7 | 1516 | 1846 | 602238787 | 602239116 | 2.570000e-112 | 416.0 |
16 | TraesCS3B01G195800 | chr1B | 86.250 | 320 | 31 | 6 | 1516 | 1832 | 66928326 | 66928635 | 7.400000e-88 | 335.0 |
17 | TraesCS3B01G195800 | chr1B | 98.113 | 53 | 1 | 0 | 1961 | 2013 | 66929104 | 66929156 | 4.920000e-15 | 93.5 |
18 | TraesCS3B01G195800 | chr1B | 97.368 | 38 | 1 | 0 | 1299 | 1336 | 327570802 | 327570839 | 1.070000e-06 | 65.8 |
19 | TraesCS3B01G195800 | chr5B | 94.702 | 302 | 14 | 2 | 4314 | 4614 | 398807475 | 398807175 | 6.990000e-128 | 468.0 |
20 | TraesCS3B01G195800 | chr6B | 93.537 | 294 | 18 | 1 | 4319 | 4612 | 683421239 | 683421531 | 1.970000e-118 | 436.0 |
21 | TraesCS3B01G195800 | chr6B | 82.328 | 464 | 71 | 11 | 1017 | 1476 | 434184514 | 434184970 | 4.330000e-105 | 392.0 |
22 | TraesCS3B01G195800 | chr4B | 93.515 | 293 | 18 | 1 | 4323 | 4614 | 65528210 | 65528502 | 7.090000e-118 | 435.0 |
23 | TraesCS3B01G195800 | chr4B | 93.174 | 293 | 19 | 1 | 4323 | 4614 | 65100177 | 65100469 | 3.300000e-116 | 429.0 |
24 | TraesCS3B01G195800 | chr6A | 82.189 | 466 | 68 | 14 | 1017 | 1476 | 389758286 | 389758742 | 2.010000e-103 | 387.0 |
25 | TraesCS3B01G195800 | chr7A | 85.714 | 196 | 17 | 4 | 1557 | 1751 | 165443491 | 165443306 | 3.640000e-46 | 196.0 |
26 | TraesCS3B01G195800 | chr7D | 97.368 | 38 | 1 | 0 | 1299 | 1336 | 619809261 | 619809298 | 1.070000e-06 | 65.8 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3B01G195800 | chr3B | 222244875 | 222249488 | 4613 | False | 8521.000000 | 8521 | 100.0000 | 1 | 4614 | 1 | chr3B.!!$F1 | 4613 |
1 | TraesCS3B01G195800 | chr3A | 179534388 | 179538646 | 4258 | True | 3086.000000 | 4807 | 93.0180 | 3 | 4308 | 2 | chr3A.!!$R1 | 4305 |
2 | TraesCS3B01G195800 | chr3D | 151436876 | 151441438 | 4562 | False | 963.366667 | 2843 | 93.8225 | 1 | 4308 | 6 | chr3D.!!$F2 | 4307 |
3 | TraesCS3B01G195800 | chr1B | 66928326 | 66929156 | 830 | False | 214.250000 | 335 | 92.1815 | 1516 | 2013 | 2 | chr1B.!!$F5 | 497 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
580 | 588 | 0.033601 | TCTTGTGGTTGTGGCCTTGT | 60.034 | 50.0 | 3.32 | 0.0 | 0.0 | 3.16 | F |
581 | 589 | 0.102844 | CTTGTGGTTGTGGCCTTGTG | 59.897 | 55.0 | 3.32 | 0.0 | 0.0 | 3.33 | F |
2104 | 2526 | 0.467290 | TGTTTGCTTGGGGGACAGTC | 60.467 | 55.0 | 0.00 | 0.0 | 0.0 | 3.51 | F |
2806 | 3234 | 0.179032 | ACAACAACGGCATGACTCCA | 60.179 | 50.0 | 0.00 | 0.0 | 0.0 | 3.86 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2437 | 2865 | 0.981183 | ACGCTGTATTCCCTTGGTCA | 59.019 | 50.0 | 0.00 | 0.0 | 0.00 | 4.02 | R |
2790 | 3218 | 0.603707 | CAGTGGAGTCATGCCGTTGT | 60.604 | 55.0 | 0.00 | 0.0 | 0.00 | 3.32 | R |
3079 | 3513 | 0.605589 | GTCCCAGGGTTCCAAGTTCG | 60.606 | 60.0 | 5.01 | 0.0 | 0.00 | 3.95 | R |
4565 | 5326 | 0.029567 | AATCGCCACGACTCTCGATC | 59.970 | 55.0 | 0.00 | 0.0 | 43.74 | 3.69 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
27 | 28 | 6.207614 | GGTCCAAATCATTATCCTCTTTAGCC | 59.792 | 42.308 | 0.00 | 0.00 | 0.00 | 3.93 |
69 | 70 | 1.380524 | CAGCAGGCATCCTTCTCTTG | 58.619 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
166 | 167 | 7.606456 | TGGCTGTAGAATAAGTAAGTTCCAAAG | 59.394 | 37.037 | 0.00 | 0.00 | 0.00 | 2.77 |
306 | 310 | 3.879932 | AACTCGCTTGTTTCTTGCTAC | 57.120 | 42.857 | 0.00 | 0.00 | 0.00 | 3.58 |
309 | 313 | 4.238514 | ACTCGCTTGTTTCTTGCTACTAG | 58.761 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
314 | 318 | 5.846473 | CGCTTGTTTCTTGCTACTAGTTTTC | 59.154 | 40.000 | 0.00 | 0.00 | 0.00 | 2.29 |
317 | 321 | 7.254795 | GCTTGTTTCTTGCTACTAGTTTTCTCA | 60.255 | 37.037 | 0.00 | 0.00 | 0.00 | 3.27 |
319 | 323 | 6.200286 | TGTTTCTTGCTACTAGTTTTCTCACG | 59.800 | 38.462 | 0.00 | 0.00 | 0.00 | 4.35 |
320 | 324 | 4.235360 | TCTTGCTACTAGTTTTCTCACGC | 58.765 | 43.478 | 0.00 | 0.00 | 0.00 | 5.34 |
322 | 326 | 3.575630 | TGCTACTAGTTTTCTCACGCAG | 58.424 | 45.455 | 0.00 | 0.00 | 0.00 | 5.18 |
324 | 328 | 4.082190 | TGCTACTAGTTTTCTCACGCAGAT | 60.082 | 41.667 | 0.00 | 0.00 | 0.00 | 2.90 |
325 | 329 | 4.501198 | GCTACTAGTTTTCTCACGCAGATC | 59.499 | 45.833 | 0.00 | 0.00 | 0.00 | 2.75 |
326 | 330 | 4.521130 | ACTAGTTTTCTCACGCAGATCA | 57.479 | 40.909 | 0.00 | 0.00 | 0.00 | 2.92 |
327 | 331 | 4.883083 | ACTAGTTTTCTCACGCAGATCAA | 58.117 | 39.130 | 0.00 | 0.00 | 0.00 | 2.57 |
328 | 332 | 5.482908 | ACTAGTTTTCTCACGCAGATCAAT | 58.517 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
336 | 340 | 6.887376 | TCTCACGCAGATCAATTAGTTAAC | 57.113 | 37.500 | 0.00 | 0.00 | 0.00 | 2.01 |
400 | 404 | 7.213678 | TCTTGCCGTAAATCCATTTTTCTTTT | 58.786 | 30.769 | 0.00 | 0.00 | 0.00 | 2.27 |
404 | 409 | 6.425417 | GCCGTAAATCCATTTTTCTTTTTGGA | 59.575 | 34.615 | 0.00 | 0.00 | 42.18 | 3.53 |
405 | 410 | 7.360017 | GCCGTAAATCCATTTTTCTTTTTGGAG | 60.360 | 37.037 | 0.00 | 0.00 | 41.33 | 3.86 |
406 | 411 | 7.117667 | CCGTAAATCCATTTTTCTTTTTGGAGG | 59.882 | 37.037 | 0.00 | 0.00 | 41.33 | 4.30 |
407 | 412 | 7.117667 | CGTAAATCCATTTTTCTTTTTGGAGGG | 59.882 | 37.037 | 0.00 | 0.00 | 41.33 | 4.30 |
408 | 413 | 6.762077 | AATCCATTTTTCTTTTTGGAGGGA | 57.238 | 33.333 | 0.00 | 0.00 | 41.33 | 4.20 |
409 | 414 | 5.806654 | TCCATTTTTCTTTTTGGAGGGAG | 57.193 | 39.130 | 0.00 | 0.00 | 33.40 | 4.30 |
410 | 415 | 4.592778 | TCCATTTTTCTTTTTGGAGGGAGG | 59.407 | 41.667 | 0.00 | 0.00 | 33.40 | 4.30 |
411 | 416 | 4.263025 | CCATTTTTCTTTTTGGAGGGAGGG | 60.263 | 45.833 | 0.00 | 0.00 | 0.00 | 4.30 |
412 | 417 | 3.983533 | TTTTCTTTTTGGAGGGAGGGA | 57.016 | 42.857 | 0.00 | 0.00 | 0.00 | 4.20 |
413 | 418 | 3.525800 | TTTCTTTTTGGAGGGAGGGAG | 57.474 | 47.619 | 0.00 | 0.00 | 0.00 | 4.30 |
414 | 419 | 1.372501 | TCTTTTTGGAGGGAGGGAGG | 58.627 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
415 | 420 | 0.332972 | CTTTTTGGAGGGAGGGAGGG | 59.667 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
416 | 421 | 0.103608 | TTTTTGGAGGGAGGGAGGGA | 60.104 | 55.000 | 0.00 | 0.00 | 0.00 | 4.20 |
438 | 443 | 1.522900 | GAGGGAGGGATGGAATGGAA | 58.477 | 55.000 | 0.00 | 0.00 | 0.00 | 3.53 |
439 | 444 | 2.068977 | GAGGGAGGGATGGAATGGAAT | 58.931 | 52.381 | 0.00 | 0.00 | 0.00 | 3.01 |
440 | 445 | 1.785208 | AGGGAGGGATGGAATGGAATG | 59.215 | 52.381 | 0.00 | 0.00 | 0.00 | 2.67 |
441 | 446 | 1.203100 | GGGAGGGATGGAATGGAATGG | 60.203 | 57.143 | 0.00 | 0.00 | 0.00 | 3.16 |
442 | 447 | 1.782752 | GGAGGGATGGAATGGAATGGA | 59.217 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
509 | 514 | 0.519077 | CTGCGCTTGAAAAGGTCTCC | 59.481 | 55.000 | 9.73 | 0.00 | 46.35 | 3.71 |
536 | 544 | 2.285368 | ATGGCCCCTCTCGTTCCA | 60.285 | 61.111 | 0.00 | 0.00 | 0.00 | 3.53 |
542 | 550 | 0.912486 | CCCCTCTCGTTCCATTTCCT | 59.088 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
550 | 558 | 1.732259 | CGTTCCATTTCCTCTTGACGG | 59.268 | 52.381 | 0.00 | 0.00 | 0.00 | 4.79 |
568 | 576 | 1.078567 | GCCTGCCTCTCTCTTGTGG | 60.079 | 63.158 | 0.00 | 0.00 | 0.00 | 4.17 |
575 | 583 | 1.517242 | CTCTCTCTTGTGGTTGTGGC | 58.483 | 55.000 | 0.00 | 0.00 | 0.00 | 5.01 |
576 | 584 | 0.108585 | TCTCTCTTGTGGTTGTGGCC | 59.891 | 55.000 | 0.00 | 0.00 | 0.00 | 5.36 |
579 | 587 | 0.670162 | CTCTTGTGGTTGTGGCCTTG | 59.330 | 55.000 | 3.32 | 0.00 | 0.00 | 3.61 |
580 | 588 | 0.033601 | TCTTGTGGTTGTGGCCTTGT | 60.034 | 50.000 | 3.32 | 0.00 | 0.00 | 3.16 |
581 | 589 | 0.102844 | CTTGTGGTTGTGGCCTTGTG | 59.897 | 55.000 | 3.32 | 0.00 | 0.00 | 3.33 |
582 | 590 | 1.326213 | TTGTGGTTGTGGCCTTGTGG | 61.326 | 55.000 | 3.32 | 0.00 | 0.00 | 4.17 |
583 | 591 | 2.123511 | TGGTTGTGGCCTTGTGGG | 60.124 | 61.111 | 3.32 | 0.00 | 38.36 | 4.61 |
584 | 592 | 2.123468 | GGTTGTGGCCTTGTGGGT | 60.123 | 61.111 | 3.32 | 0.00 | 37.43 | 4.51 |
585 | 593 | 1.760480 | GGTTGTGGCCTTGTGGGTT | 60.760 | 57.895 | 3.32 | 0.00 | 37.43 | 4.11 |
586 | 594 | 1.739667 | GTTGTGGCCTTGTGGGTTC | 59.260 | 57.895 | 3.32 | 0.00 | 37.43 | 3.62 |
588 | 596 | 2.983592 | GTGGCCTTGTGGGTTCCG | 60.984 | 66.667 | 3.32 | 0.00 | 37.43 | 4.30 |
589 | 597 | 4.278513 | TGGCCTTGTGGGTTCCGG | 62.279 | 66.667 | 3.32 | 0.00 | 37.43 | 5.14 |
660 | 668 | 0.687427 | GGAGCCTCTGCCTCTCTCTT | 60.687 | 60.000 | 0.00 | 0.00 | 38.69 | 2.85 |
719 | 737 | 3.825014 | GCCCGTATCTCTGAGGTATTGTA | 59.175 | 47.826 | 4.59 | 0.00 | 0.00 | 2.41 |
851 | 869 | 1.727022 | CTTTGAAGCTGCCGCAACG | 60.727 | 57.895 | 2.05 | 0.00 | 39.10 | 4.10 |
944 | 979 | 0.975135 | TGTTCATGGCAAATGGGTGG | 59.025 | 50.000 | 0.00 | 0.00 | 0.00 | 4.61 |
946 | 981 | 0.908656 | TTCATGGCAAATGGGTGGGG | 60.909 | 55.000 | 0.00 | 0.00 | 0.00 | 4.96 |
1158 | 1205 | 1.138661 | CTCATCAAGCTCACCTCCCTC | 59.861 | 57.143 | 0.00 | 0.00 | 0.00 | 4.30 |
1482 | 1529 | 3.869272 | CGGATGCTGCTCAACGCC | 61.869 | 66.667 | 0.00 | 0.00 | 38.05 | 5.68 |
1491 | 1538 | 2.661537 | CTCAACGCCGTGCTGTCA | 60.662 | 61.111 | 0.00 | 0.00 | 0.00 | 3.58 |
1492 | 1539 | 2.029288 | CTCAACGCCGTGCTGTCAT | 61.029 | 57.895 | 0.00 | 0.00 | 0.00 | 3.06 |
1689 | 1742 | 4.120331 | GGCGCCACCATCTTGCAC | 62.120 | 66.667 | 24.80 | 0.00 | 38.86 | 4.57 |
1722 | 1775 | 0.623723 | GGGGCCAAGTTGAGGTGATA | 59.376 | 55.000 | 4.39 | 0.00 | 0.00 | 2.15 |
1748 | 1804 | 7.978975 | ACTACTTCTGCTTCTGAATCTTGATAC | 59.021 | 37.037 | 0.00 | 0.00 | 0.00 | 2.24 |
1770 | 1826 | 3.281727 | TGAGTGCCTCAGTTTCAGTTT | 57.718 | 42.857 | 1.25 | 0.00 | 35.39 | 2.66 |
1910 | 1977 | 9.201989 | TCTAATGAGATTAGTCACCATTACAGT | 57.798 | 33.333 | 8.16 | 0.00 | 42.21 | 3.55 |
2099 | 2521 | 1.228552 | GCTCTGTTTGCTTGGGGGA | 60.229 | 57.895 | 0.00 | 0.00 | 0.00 | 4.81 |
2104 | 2526 | 0.467290 | TGTTTGCTTGGGGGACAGTC | 60.467 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2123 | 2545 | 2.225963 | GTCAGCTCATGATATTGCCTGC | 59.774 | 50.000 | 0.00 | 0.00 | 40.92 | 4.85 |
2147 | 2569 | 7.227711 | TGCATCTACAAAAGTGCTTAACAACTA | 59.772 | 33.333 | 0.00 | 0.00 | 34.94 | 2.24 |
2148 | 2570 | 8.073768 | GCATCTACAAAAGTGCTTAACAACTAA | 58.926 | 33.333 | 0.00 | 0.00 | 32.66 | 2.24 |
2149 | 2571 | 9.599322 | CATCTACAAAAGTGCTTAACAACTAAG | 57.401 | 33.333 | 0.00 | 0.00 | 40.17 | 2.18 |
2150 | 2572 | 8.726870 | TCTACAAAAGTGCTTAACAACTAAGT | 57.273 | 30.769 | 0.00 | 0.00 | 39.49 | 2.24 |
2151 | 2573 | 9.169592 | TCTACAAAAGTGCTTAACAACTAAGTT | 57.830 | 29.630 | 0.00 | 0.00 | 39.49 | 2.66 |
2187 | 2609 | 3.442100 | GCTTGCAGGAATTATTCAGTGC | 58.558 | 45.455 | 18.70 | 18.70 | 39.98 | 4.40 |
2272 | 2694 | 8.485392 | TCATTCTAAATCATATGGTGTCTCACA | 58.515 | 33.333 | 2.13 | 0.00 | 35.86 | 3.58 |
2286 | 2708 | 3.090037 | GTCTCACAGTGGGAAGCTAGTA | 58.910 | 50.000 | 4.12 | 0.00 | 0.00 | 1.82 |
2310 | 2732 | 3.581755 | TCATCATTTCTTTTGCTGCAGC | 58.418 | 40.909 | 31.89 | 31.89 | 42.50 | 5.25 |
2324 | 2746 | 2.876091 | CTGCAGCATCAGGTTCATTTG | 58.124 | 47.619 | 0.00 | 0.00 | 0.00 | 2.32 |
2437 | 2865 | 6.072948 | CCTTCGATATCGTCAACTCTGTAGAT | 60.073 | 42.308 | 23.61 | 0.00 | 40.80 | 1.98 |
2790 | 3218 | 0.249155 | GACCTGAACGTCCGTGACAA | 60.249 | 55.000 | 0.00 | 0.00 | 32.09 | 3.18 |
2806 | 3234 | 0.179032 | ACAACAACGGCATGACTCCA | 60.179 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
2824 | 3252 | 4.223923 | ACTCCACTGGATTTACTGAGGAAG | 59.776 | 45.833 | 0.00 | 0.00 | 31.09 | 3.46 |
2881 | 3309 | 4.473520 | CTGATTCTGGCCGGCGGT | 62.474 | 66.667 | 28.82 | 5.87 | 0.00 | 5.68 |
2980 | 3408 | 2.159028 | GGGGACTTCTTTCAGGATCTCG | 60.159 | 54.545 | 0.00 | 0.00 | 0.00 | 4.04 |
2983 | 3411 | 3.386402 | GGACTTCTTTCAGGATCTCGGAT | 59.614 | 47.826 | 0.00 | 0.00 | 0.00 | 4.18 |
3010 | 3438 | 2.818751 | TTTTCCTCCATGCGGGTATT | 57.181 | 45.000 | 0.00 | 0.00 | 38.11 | 1.89 |
3097 | 3531 | 1.758592 | CGAACTTGGAACCCTGGGA | 59.241 | 57.895 | 22.23 | 0.00 | 0.00 | 4.37 |
3142 | 3576 | 3.782244 | CAGAGCGCGGCAAGACAC | 61.782 | 66.667 | 8.83 | 0.00 | 0.00 | 3.67 |
3189 | 3623 | 1.351017 | TCGCAAGGGGAAGAAATCAGT | 59.649 | 47.619 | 0.00 | 0.00 | 38.47 | 3.41 |
3357 | 3791 | 3.564644 | CCATCAATGAAGATGAGGTCTGC | 59.435 | 47.826 | 5.57 | 0.00 | 46.51 | 4.26 |
3364 | 3798 | 0.536260 | AGATGAGGTCTGCAGCTGAC | 59.464 | 55.000 | 20.43 | 21.21 | 35.31 | 3.51 |
3474 | 3908 | 0.532115 | GAACCATCACCCAATGCCAC | 59.468 | 55.000 | 0.00 | 0.00 | 0.00 | 5.01 |
3479 | 3913 | 2.769652 | ATCACCCAATGCCACTGCGT | 62.770 | 55.000 | 0.00 | 0.00 | 41.78 | 5.24 |
3539 | 3973 | 7.450634 | TGAACAGTAGACTTATGAACCAGTACT | 59.549 | 37.037 | 0.00 | 0.00 | 0.00 | 2.73 |
3549 | 3983 | 1.266989 | GAACCAGTACTTTGGCACTGC | 59.733 | 52.381 | 0.00 | 0.00 | 42.18 | 4.40 |
3571 | 4005 | 0.894141 | CGCAATTGGGGGATTCAACA | 59.106 | 50.000 | 14.43 | 0.00 | 0.00 | 3.33 |
3663 | 4097 | 1.966451 | GACACCGCCTGTTTCCCTG | 60.966 | 63.158 | 0.00 | 0.00 | 31.03 | 4.45 |
3671 | 4105 | 1.739067 | CCTGTTTCCCTGGATTCGAC | 58.261 | 55.000 | 0.00 | 0.00 | 34.15 | 4.20 |
3692 | 4126 | 5.219987 | CGACGCTTAAAAGTTACAGCTACTC | 60.220 | 44.000 | 0.00 | 0.00 | 0.00 | 2.59 |
3716 | 4156 | 3.130693 | GGTAGCACCAGATAGACGACTTT | 59.869 | 47.826 | 0.00 | 0.00 | 38.42 | 2.66 |
3729 | 4169 | 8.185505 | AGATAGACGACTTTAGTCTTCATTGTC | 58.814 | 37.037 | 15.89 | 10.60 | 45.74 | 3.18 |
3730 | 4170 | 5.154932 | AGACGACTTTAGTCTTCATTGTCG | 58.845 | 41.667 | 15.89 | 10.39 | 45.74 | 4.35 |
3737 | 4177 | 2.530701 | AGTCTTCATTGTCGGAGTCCT | 58.469 | 47.619 | 7.77 | 0.00 | 0.00 | 3.85 |
3752 | 4192 | 3.555168 | GGAGTCCTTGTGGTGTTACTGAG | 60.555 | 52.174 | 0.41 | 0.00 | 34.23 | 3.35 |
3776 | 4216 | 5.770663 | GGAGGCCGAGATAGCTAATCATATA | 59.229 | 44.000 | 0.00 | 0.00 | 37.03 | 0.86 |
3778 | 4218 | 7.225784 | AGGCCGAGATAGCTAATCATATATG | 57.774 | 40.000 | 6.36 | 6.36 | 37.03 | 1.78 |
3951 | 4391 | 9.746711 | GAATGATTCGTTATACATCTGCAATAC | 57.253 | 33.333 | 0.00 | 0.00 | 0.00 | 1.89 |
3954 | 4394 | 6.838198 | TTCGTTATACATCTGCAATACCAC | 57.162 | 37.500 | 0.00 | 0.00 | 0.00 | 4.16 |
3969 | 4409 | 1.004080 | CCACAGTGCTCACCTCTGG | 60.004 | 63.158 | 0.00 | 0.00 | 38.93 | 3.86 |
4049 | 4489 | 7.598493 | GTGCCTGCTGTTATTCTTTTCATTTTA | 59.402 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
4171 | 4645 | 7.712797 | TCAACTACCAATGACTTTTCTTTTCC | 58.287 | 34.615 | 0.00 | 0.00 | 0.00 | 3.13 |
4308 | 5069 | 7.901029 | TGAATGTGTTTTGTCTAGAGAGATCT | 58.099 | 34.615 | 0.00 | 0.00 | 33.14 | 2.75 |
4309 | 5070 | 8.370940 | TGAATGTGTTTTGTCTAGAGAGATCTT | 58.629 | 33.333 | 0.00 | 0.00 | 33.14 | 2.40 |
4310 | 5071 | 9.213799 | GAATGTGTTTTGTCTAGAGAGATCTTT | 57.786 | 33.333 | 0.00 | 0.00 | 33.14 | 2.52 |
4311 | 5072 | 9.566432 | AATGTGTTTTGTCTAGAGAGATCTTTT | 57.434 | 29.630 | 0.00 | 0.00 | 33.14 | 2.27 |
4312 | 5073 | 8.964476 | TGTGTTTTGTCTAGAGAGATCTTTTT | 57.036 | 30.769 | 0.00 | 0.00 | 33.14 | 1.94 |
4332 | 5093 | 5.553290 | TTTTTCTTTTTCTTTTTGCGGGG | 57.447 | 34.783 | 0.00 | 0.00 | 0.00 | 5.73 |
4333 | 5094 | 2.900716 | TCTTTTTCTTTTTGCGGGGG | 57.099 | 45.000 | 0.00 | 0.00 | 0.00 | 5.40 |
4334 | 5095 | 2.389715 | TCTTTTTCTTTTTGCGGGGGA | 58.610 | 42.857 | 0.00 | 0.00 | 0.00 | 4.81 |
4335 | 5096 | 2.766828 | TCTTTTTCTTTTTGCGGGGGAA | 59.233 | 40.909 | 0.00 | 0.00 | 0.00 | 3.97 |
4336 | 5097 | 3.197983 | TCTTTTTCTTTTTGCGGGGGAAA | 59.802 | 39.130 | 0.00 | 0.00 | 0.00 | 3.13 |
4337 | 5098 | 3.847671 | TTTTCTTTTTGCGGGGGAAAT | 57.152 | 38.095 | 0.00 | 0.00 | 0.00 | 2.17 |
4338 | 5099 | 4.957684 | TTTTCTTTTTGCGGGGGAAATA | 57.042 | 36.364 | 0.00 | 0.00 | 0.00 | 1.40 |
4339 | 5100 | 5.491323 | TTTTCTTTTTGCGGGGGAAATAT | 57.509 | 34.783 | 0.00 | 0.00 | 0.00 | 1.28 |
4340 | 5101 | 5.491323 | TTTCTTTTTGCGGGGGAAATATT | 57.509 | 34.783 | 0.00 | 0.00 | 0.00 | 1.28 |
4341 | 5102 | 4.464069 | TCTTTTTGCGGGGGAAATATTG | 57.536 | 40.909 | 0.00 | 0.00 | 0.00 | 1.90 |
4342 | 5103 | 4.090090 | TCTTTTTGCGGGGGAAATATTGA | 58.910 | 39.130 | 0.00 | 0.00 | 0.00 | 2.57 |
4343 | 5104 | 4.159506 | TCTTTTTGCGGGGGAAATATTGAG | 59.840 | 41.667 | 0.00 | 0.00 | 0.00 | 3.02 |
4344 | 5105 | 3.374042 | TTTGCGGGGGAAATATTGAGA | 57.626 | 42.857 | 0.00 | 0.00 | 0.00 | 3.27 |
4345 | 5106 | 2.638480 | TGCGGGGGAAATATTGAGAG | 57.362 | 50.000 | 0.00 | 0.00 | 0.00 | 3.20 |
4346 | 5107 | 1.239347 | GCGGGGGAAATATTGAGAGC | 58.761 | 55.000 | 0.00 | 0.00 | 0.00 | 4.09 |
4347 | 5108 | 1.202818 | GCGGGGGAAATATTGAGAGCT | 60.203 | 52.381 | 0.00 | 0.00 | 0.00 | 4.09 |
4348 | 5109 | 2.749800 | GCGGGGGAAATATTGAGAGCTT | 60.750 | 50.000 | 0.00 | 0.00 | 0.00 | 3.74 |
4349 | 5110 | 3.555966 | CGGGGGAAATATTGAGAGCTTT | 58.444 | 45.455 | 0.00 | 0.00 | 0.00 | 3.51 |
4350 | 5111 | 4.714632 | CGGGGGAAATATTGAGAGCTTTA | 58.285 | 43.478 | 0.00 | 0.00 | 0.00 | 1.85 |
4351 | 5112 | 5.316987 | CGGGGGAAATATTGAGAGCTTTAT | 58.683 | 41.667 | 0.00 | 0.00 | 0.00 | 1.40 |
4352 | 5113 | 5.770162 | CGGGGGAAATATTGAGAGCTTTATT | 59.230 | 40.000 | 0.00 | 0.00 | 0.00 | 1.40 |
4353 | 5114 | 6.940298 | CGGGGGAAATATTGAGAGCTTTATTA | 59.060 | 38.462 | 0.00 | 0.00 | 0.00 | 0.98 |
4354 | 5115 | 7.094762 | CGGGGGAAATATTGAGAGCTTTATTAC | 60.095 | 40.741 | 0.00 | 0.00 | 0.00 | 1.89 |
4355 | 5116 | 7.945109 | GGGGGAAATATTGAGAGCTTTATTACT | 59.055 | 37.037 | 0.00 | 0.00 | 0.00 | 2.24 |
4356 | 5117 | 9.355916 | GGGGAAATATTGAGAGCTTTATTACTT | 57.644 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
4367 | 5128 | 5.893143 | GCTTTATTACTTGAAAGCGTTCG | 57.107 | 39.130 | 7.88 | 0.00 | 45.70 | 3.95 |
4368 | 5129 | 4.259964 | GCTTTATTACTTGAAAGCGTTCGC | 59.740 | 41.667 | 9.24 | 9.24 | 45.70 | 4.70 |
4369 | 5130 | 5.600908 | TTTATTACTTGAAAGCGTTCGCT | 57.399 | 34.783 | 14.02 | 14.02 | 44.14 | 4.93 |
4370 | 5131 | 2.941891 | TTACTTGAAAGCGTTCGCTG | 57.058 | 45.000 | 20.05 | 9.80 | 41.76 | 5.18 |
4371 | 5132 | 1.144969 | TACTTGAAAGCGTTCGCTGG | 58.855 | 50.000 | 20.05 | 10.52 | 41.76 | 4.85 |
4372 | 5133 | 1.207593 | CTTGAAAGCGTTCGCTGGG | 59.792 | 57.895 | 20.05 | 5.79 | 41.76 | 4.45 |
4373 | 5134 | 2.786564 | CTTGAAAGCGTTCGCTGGGC | 62.787 | 60.000 | 20.05 | 12.52 | 41.76 | 5.36 |
4374 | 5135 | 3.353836 | GAAAGCGTTCGCTGGGCA | 61.354 | 61.111 | 20.05 | 0.00 | 41.76 | 5.36 |
4375 | 5136 | 3.314388 | GAAAGCGTTCGCTGGGCAG | 62.314 | 63.158 | 20.05 | 0.00 | 41.76 | 4.85 |
4376 | 5137 | 4.626081 | AAGCGTTCGCTGGGCAGT | 62.626 | 61.111 | 20.05 | 0.73 | 41.76 | 4.40 |
4379 | 5140 | 3.114616 | CGTTCGCTGGGCAGTCAG | 61.115 | 66.667 | 0.00 | 0.00 | 37.79 | 3.51 |
4401 | 5162 | 4.963318 | CCAATAGGCTACTGATCAGGAA | 57.037 | 45.455 | 26.08 | 13.04 | 0.00 | 3.36 |
4402 | 5163 | 4.892433 | CCAATAGGCTACTGATCAGGAAG | 58.108 | 47.826 | 26.08 | 21.72 | 0.00 | 3.46 |
4403 | 5164 | 4.314121 | CAATAGGCTACTGATCAGGAAGC | 58.686 | 47.826 | 30.12 | 30.12 | 39.41 | 3.86 |
4404 | 5165 | 2.173126 | AGGCTACTGATCAGGAAGCT | 57.827 | 50.000 | 33.34 | 23.37 | 39.78 | 3.74 |
4405 | 5166 | 3.320610 | AGGCTACTGATCAGGAAGCTA | 57.679 | 47.619 | 33.34 | 16.83 | 39.78 | 3.32 |
4406 | 5167 | 3.230134 | AGGCTACTGATCAGGAAGCTAG | 58.770 | 50.000 | 33.34 | 23.52 | 39.78 | 3.42 |
4407 | 5168 | 2.298729 | GGCTACTGATCAGGAAGCTAGG | 59.701 | 54.545 | 33.34 | 15.67 | 39.78 | 3.02 |
4408 | 5169 | 3.226777 | GCTACTGATCAGGAAGCTAGGA | 58.773 | 50.000 | 30.41 | 2.76 | 38.06 | 2.94 |
4409 | 5170 | 3.255642 | GCTACTGATCAGGAAGCTAGGAG | 59.744 | 52.174 | 30.41 | 12.01 | 38.06 | 3.69 |
4410 | 5171 | 3.396685 | ACTGATCAGGAAGCTAGGAGT | 57.603 | 47.619 | 26.08 | 0.00 | 0.00 | 3.85 |
4411 | 5172 | 4.528076 | ACTGATCAGGAAGCTAGGAGTA | 57.472 | 45.455 | 26.08 | 0.00 | 0.00 | 2.59 |
4412 | 5173 | 4.211920 | ACTGATCAGGAAGCTAGGAGTAC | 58.788 | 47.826 | 26.08 | 0.00 | 0.00 | 2.73 |
4413 | 5174 | 4.079443 | ACTGATCAGGAAGCTAGGAGTACT | 60.079 | 45.833 | 26.08 | 0.00 | 0.00 | 2.73 |
4414 | 5175 | 4.873010 | TGATCAGGAAGCTAGGAGTACTT | 58.127 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
4415 | 5176 | 5.273208 | TGATCAGGAAGCTAGGAGTACTTT | 58.727 | 41.667 | 0.00 | 0.00 | 0.00 | 2.66 |
4416 | 5177 | 5.361285 | TGATCAGGAAGCTAGGAGTACTTTC | 59.639 | 44.000 | 0.00 | 0.00 | 0.00 | 2.62 |
4417 | 5178 | 3.695060 | TCAGGAAGCTAGGAGTACTTTCG | 59.305 | 47.826 | 0.00 | 0.00 | 0.00 | 3.46 |
4418 | 5179 | 3.695060 | CAGGAAGCTAGGAGTACTTTCGA | 59.305 | 47.826 | 0.00 | 0.00 | 0.00 | 3.71 |
4419 | 5180 | 4.339814 | CAGGAAGCTAGGAGTACTTTCGAT | 59.660 | 45.833 | 0.00 | 0.00 | 0.00 | 3.59 |
4420 | 5181 | 4.581409 | AGGAAGCTAGGAGTACTTTCGATC | 59.419 | 45.833 | 0.00 | 0.00 | 0.00 | 3.69 |
4421 | 5182 | 4.261698 | GGAAGCTAGGAGTACTTTCGATCC | 60.262 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
4422 | 5183 | 3.899726 | AGCTAGGAGTACTTTCGATCCA | 58.100 | 45.455 | 0.00 | 0.00 | 34.08 | 3.41 |
4423 | 5184 | 3.886505 | AGCTAGGAGTACTTTCGATCCAG | 59.113 | 47.826 | 0.00 | 0.89 | 34.08 | 3.86 |
4424 | 5185 | 3.551250 | GCTAGGAGTACTTTCGATCCAGC | 60.551 | 52.174 | 0.00 | 6.30 | 34.08 | 4.85 |
4425 | 5186 | 2.741145 | AGGAGTACTTTCGATCCAGCT | 58.259 | 47.619 | 0.00 | 0.00 | 34.08 | 4.24 |
4426 | 5187 | 3.100671 | AGGAGTACTTTCGATCCAGCTT | 58.899 | 45.455 | 0.00 | 0.00 | 34.08 | 3.74 |
4427 | 5188 | 3.515901 | AGGAGTACTTTCGATCCAGCTTT | 59.484 | 43.478 | 0.00 | 0.00 | 34.08 | 3.51 |
4428 | 5189 | 3.866327 | GGAGTACTTTCGATCCAGCTTTC | 59.134 | 47.826 | 0.00 | 0.00 | 0.00 | 2.62 |
4429 | 5190 | 3.512680 | AGTACTTTCGATCCAGCTTTCG | 58.487 | 45.455 | 4.51 | 4.51 | 36.72 | 3.46 |
4430 | 5191 | 1.726853 | ACTTTCGATCCAGCTTTCGG | 58.273 | 50.000 | 9.78 | 0.00 | 36.08 | 4.30 |
4431 | 5192 | 1.002087 | ACTTTCGATCCAGCTTTCGGT | 59.998 | 47.619 | 9.78 | 0.00 | 36.08 | 4.69 |
4432 | 5193 | 1.661112 | CTTTCGATCCAGCTTTCGGTC | 59.339 | 52.381 | 9.78 | 0.00 | 36.08 | 4.79 |
4433 | 5194 | 0.606096 | TTCGATCCAGCTTTCGGTCA | 59.394 | 50.000 | 9.78 | 0.00 | 36.08 | 4.02 |
4434 | 5195 | 0.108804 | TCGATCCAGCTTTCGGTCAC | 60.109 | 55.000 | 9.78 | 0.00 | 36.08 | 3.67 |
4435 | 5196 | 1.413767 | CGATCCAGCTTTCGGTCACG | 61.414 | 60.000 | 3.19 | 0.00 | 42.74 | 4.35 |
4436 | 5197 | 0.389948 | GATCCAGCTTTCGGTCACGT | 60.390 | 55.000 | 0.00 | 0.00 | 41.85 | 4.49 |
4437 | 5198 | 0.389948 | ATCCAGCTTTCGGTCACGTC | 60.390 | 55.000 | 0.00 | 0.00 | 41.85 | 4.34 |
4438 | 5199 | 1.300620 | CCAGCTTTCGGTCACGTCA | 60.301 | 57.895 | 0.00 | 0.00 | 41.85 | 4.35 |
4439 | 5200 | 0.878523 | CCAGCTTTCGGTCACGTCAA | 60.879 | 55.000 | 0.00 | 0.00 | 41.85 | 3.18 |
4440 | 5201 | 1.148310 | CAGCTTTCGGTCACGTCAAT | 58.852 | 50.000 | 0.00 | 0.00 | 41.85 | 2.57 |
4441 | 5202 | 1.531149 | CAGCTTTCGGTCACGTCAATT | 59.469 | 47.619 | 0.00 | 0.00 | 41.85 | 2.32 |
4442 | 5203 | 1.531149 | AGCTTTCGGTCACGTCAATTG | 59.469 | 47.619 | 0.00 | 0.00 | 41.85 | 2.32 |
4443 | 5204 | 1.263217 | GCTTTCGGTCACGTCAATTGT | 59.737 | 47.619 | 5.13 | 0.00 | 41.85 | 2.71 |
4444 | 5205 | 2.903678 | CTTTCGGTCACGTCAATTGTG | 58.096 | 47.619 | 5.13 | 2.17 | 41.85 | 3.33 |
4445 | 5206 | 0.584396 | TTCGGTCACGTCAATTGTGC | 59.416 | 50.000 | 5.13 | 0.00 | 41.85 | 4.57 |
4446 | 5207 | 0.530870 | TCGGTCACGTCAATTGTGCA | 60.531 | 50.000 | 5.13 | 0.00 | 41.85 | 4.57 |
4447 | 5208 | 0.306228 | CGGTCACGTCAATTGTGCAA | 59.694 | 50.000 | 5.13 | 0.00 | 37.26 | 4.08 |
4448 | 5209 | 1.660052 | CGGTCACGTCAATTGTGCAAG | 60.660 | 52.381 | 5.13 | 0.00 | 37.26 | 4.01 |
4449 | 5210 | 1.398595 | GTCACGTCAATTGTGCAAGC | 58.601 | 50.000 | 5.13 | 0.00 | 37.26 | 4.01 |
4450 | 5211 | 1.002468 | GTCACGTCAATTGTGCAAGCT | 60.002 | 47.619 | 5.13 | 0.00 | 37.26 | 3.74 |
4451 | 5212 | 1.675483 | TCACGTCAATTGTGCAAGCTT | 59.325 | 42.857 | 5.13 | 0.00 | 37.26 | 3.74 |
4452 | 5213 | 1.782569 | CACGTCAATTGTGCAAGCTTG | 59.217 | 47.619 | 22.44 | 22.44 | 0.00 | 4.01 |
4474 | 5235 | 2.804986 | TGGCACAAATATGAGCAGGA | 57.195 | 45.000 | 1.01 | 0.00 | 43.92 | 3.86 |
4475 | 5236 | 2.368439 | TGGCACAAATATGAGCAGGAC | 58.632 | 47.619 | 1.01 | 0.00 | 43.92 | 3.85 |
4476 | 5237 | 1.678101 | GGCACAAATATGAGCAGGACC | 59.322 | 52.381 | 1.01 | 0.00 | 43.92 | 4.46 |
4477 | 5238 | 2.368439 | GCACAAATATGAGCAGGACCA | 58.632 | 47.619 | 0.00 | 0.00 | 42.02 | 4.02 |
4478 | 5239 | 2.954318 | GCACAAATATGAGCAGGACCAT | 59.046 | 45.455 | 0.00 | 0.00 | 42.02 | 3.55 |
4479 | 5240 | 3.382546 | GCACAAATATGAGCAGGACCATT | 59.617 | 43.478 | 0.00 | 0.00 | 42.02 | 3.16 |
4480 | 5241 | 4.580167 | GCACAAATATGAGCAGGACCATTA | 59.420 | 41.667 | 0.00 | 0.00 | 42.02 | 1.90 |
4481 | 5242 | 5.278169 | GCACAAATATGAGCAGGACCATTAG | 60.278 | 44.000 | 0.00 | 0.00 | 42.02 | 1.73 |
4482 | 5243 | 4.823989 | ACAAATATGAGCAGGACCATTAGC | 59.176 | 41.667 | 0.00 | 0.00 | 0.00 | 3.09 |
4483 | 5244 | 3.710209 | ATATGAGCAGGACCATTAGCC | 57.290 | 47.619 | 0.00 | 0.00 | 0.00 | 3.93 |
4484 | 5245 | 0.107456 | ATGAGCAGGACCATTAGCCG | 59.893 | 55.000 | 0.00 | 0.00 | 0.00 | 5.52 |
4485 | 5246 | 0.975556 | TGAGCAGGACCATTAGCCGA | 60.976 | 55.000 | 0.00 | 0.00 | 0.00 | 5.54 |
4486 | 5247 | 0.394565 | GAGCAGGACCATTAGCCGAT | 59.605 | 55.000 | 0.00 | 0.00 | 0.00 | 4.18 |
4487 | 5248 | 0.394565 | AGCAGGACCATTAGCCGATC | 59.605 | 55.000 | 0.00 | 0.00 | 0.00 | 3.69 |
4488 | 5249 | 0.394565 | GCAGGACCATTAGCCGATCT | 59.605 | 55.000 | 0.00 | 0.00 | 0.00 | 2.75 |
4489 | 5250 | 1.202698 | GCAGGACCATTAGCCGATCTT | 60.203 | 52.381 | 0.00 | 0.00 | 0.00 | 2.40 |
4490 | 5251 | 2.037251 | GCAGGACCATTAGCCGATCTTA | 59.963 | 50.000 | 0.00 | 0.00 | 0.00 | 2.10 |
4491 | 5252 | 3.654414 | CAGGACCATTAGCCGATCTTAC | 58.346 | 50.000 | 0.00 | 0.00 | 0.00 | 2.34 |
4492 | 5253 | 3.069586 | CAGGACCATTAGCCGATCTTACA | 59.930 | 47.826 | 0.00 | 0.00 | 0.00 | 2.41 |
4493 | 5254 | 3.709653 | AGGACCATTAGCCGATCTTACAA | 59.290 | 43.478 | 0.00 | 0.00 | 0.00 | 2.41 |
4494 | 5255 | 4.348168 | AGGACCATTAGCCGATCTTACAAT | 59.652 | 41.667 | 0.00 | 0.00 | 0.00 | 2.71 |
4495 | 5256 | 5.542635 | AGGACCATTAGCCGATCTTACAATA | 59.457 | 40.000 | 0.00 | 0.00 | 0.00 | 1.90 |
4496 | 5257 | 6.213600 | AGGACCATTAGCCGATCTTACAATAT | 59.786 | 38.462 | 0.00 | 0.00 | 0.00 | 1.28 |
4497 | 5258 | 6.313905 | GGACCATTAGCCGATCTTACAATATG | 59.686 | 42.308 | 0.00 | 0.00 | 0.00 | 1.78 |
4498 | 5259 | 6.173339 | ACCATTAGCCGATCTTACAATATGG | 58.827 | 40.000 | 0.00 | 0.00 | 35.94 | 2.74 |
4499 | 5260 | 5.065218 | CCATTAGCCGATCTTACAATATGGC | 59.935 | 44.000 | 0.00 | 0.00 | 41.27 | 4.40 |
4500 | 5261 | 2.688507 | AGCCGATCTTACAATATGGCG | 58.311 | 47.619 | 0.00 | 0.00 | 45.44 | 5.69 |
4501 | 5262 | 2.299013 | AGCCGATCTTACAATATGGCGA | 59.701 | 45.455 | 0.00 | 0.00 | 45.44 | 5.54 |
4502 | 5263 | 3.064207 | GCCGATCTTACAATATGGCGAA | 58.936 | 45.455 | 0.00 | 0.00 | 0.00 | 4.70 |
4503 | 5264 | 3.684788 | GCCGATCTTACAATATGGCGAAT | 59.315 | 43.478 | 0.00 | 0.00 | 0.00 | 3.34 |
4504 | 5265 | 4.868171 | GCCGATCTTACAATATGGCGAATA | 59.132 | 41.667 | 0.00 | 0.00 | 0.00 | 1.75 |
4505 | 5266 | 5.523916 | GCCGATCTTACAATATGGCGAATAT | 59.476 | 40.000 | 0.00 | 0.00 | 32.49 | 1.28 |
4506 | 5267 | 6.292381 | GCCGATCTTACAATATGGCGAATATC | 60.292 | 42.308 | 0.00 | 0.00 | 30.68 | 1.63 |
4507 | 5268 | 6.756542 | CCGATCTTACAATATGGCGAATATCA | 59.243 | 38.462 | 0.00 | 0.00 | 30.68 | 2.15 |
4508 | 5269 | 7.277760 | CCGATCTTACAATATGGCGAATATCAA | 59.722 | 37.037 | 0.00 | 0.00 | 30.68 | 2.57 |
4509 | 5270 | 8.655970 | CGATCTTACAATATGGCGAATATCAAA | 58.344 | 33.333 | 0.00 | 0.00 | 30.68 | 2.69 |
4535 | 5296 | 4.104696 | GTGAAACTACCAGAGAGCTCTC | 57.895 | 50.000 | 32.45 | 32.45 | 43.17 | 3.20 |
4536 | 5297 | 3.093057 | TGAAACTACCAGAGAGCTCTCC | 58.907 | 50.000 | 34.87 | 19.83 | 43.88 | 3.71 |
4537 | 5298 | 2.909504 | AACTACCAGAGAGCTCTCCA | 57.090 | 50.000 | 34.87 | 19.19 | 43.88 | 3.86 |
4538 | 5299 | 2.909504 | ACTACCAGAGAGCTCTCCAA | 57.090 | 50.000 | 34.87 | 19.16 | 43.88 | 3.53 |
4539 | 5300 | 3.396685 | ACTACCAGAGAGCTCTCCAAT | 57.603 | 47.619 | 34.87 | 23.65 | 43.88 | 3.16 |
4540 | 5301 | 3.718723 | ACTACCAGAGAGCTCTCCAATT | 58.281 | 45.455 | 34.87 | 21.13 | 43.88 | 2.32 |
4541 | 5302 | 4.100373 | ACTACCAGAGAGCTCTCCAATTT | 58.900 | 43.478 | 34.87 | 17.28 | 43.88 | 1.82 |
4542 | 5303 | 3.625649 | ACCAGAGAGCTCTCCAATTTC | 57.374 | 47.619 | 34.87 | 13.82 | 43.88 | 2.17 |
4543 | 5304 | 3.180507 | ACCAGAGAGCTCTCCAATTTCT | 58.819 | 45.455 | 34.87 | 15.86 | 43.88 | 2.52 |
4544 | 5305 | 4.357325 | ACCAGAGAGCTCTCCAATTTCTA | 58.643 | 43.478 | 34.87 | 0.00 | 43.88 | 2.10 |
4545 | 5306 | 4.780021 | ACCAGAGAGCTCTCCAATTTCTAA | 59.220 | 41.667 | 34.87 | 0.00 | 43.88 | 2.10 |
4546 | 5307 | 5.115480 | CCAGAGAGCTCTCCAATTTCTAAC | 58.885 | 45.833 | 34.87 | 10.93 | 43.88 | 2.34 |
4547 | 5308 | 5.337894 | CCAGAGAGCTCTCCAATTTCTAACA | 60.338 | 44.000 | 34.87 | 0.00 | 43.88 | 2.41 |
4548 | 5309 | 6.169094 | CAGAGAGCTCTCCAATTTCTAACAA | 58.831 | 40.000 | 34.87 | 0.00 | 43.88 | 2.83 |
4549 | 5310 | 6.652481 | CAGAGAGCTCTCCAATTTCTAACAAA | 59.348 | 38.462 | 34.87 | 0.00 | 43.88 | 2.83 |
4550 | 5311 | 7.173907 | CAGAGAGCTCTCCAATTTCTAACAAAA | 59.826 | 37.037 | 34.87 | 0.00 | 43.88 | 2.44 |
4551 | 5312 | 7.887495 | AGAGAGCTCTCCAATTTCTAACAAAAT | 59.113 | 33.333 | 34.87 | 11.62 | 43.88 | 1.82 |
4552 | 5313 | 7.824672 | AGAGCTCTCCAATTTCTAACAAAATG | 58.175 | 34.615 | 11.45 | 0.00 | 0.00 | 2.32 |
4553 | 5314 | 6.928520 | AGCTCTCCAATTTCTAACAAAATGG | 58.071 | 36.000 | 0.00 | 0.00 | 0.00 | 3.16 |
4554 | 5315 | 6.071165 | AGCTCTCCAATTTCTAACAAAATGGG | 60.071 | 38.462 | 2.14 | 0.00 | 39.98 | 4.00 |
4555 | 5316 | 6.295292 | GCTCTCCAATTTCTAACAAAATGGGT | 60.295 | 38.462 | 3.37 | 0.00 | 39.71 | 4.51 |
4556 | 5317 | 6.991938 | TCTCCAATTTCTAACAAAATGGGTG | 58.008 | 36.000 | 3.37 | 1.85 | 39.71 | 4.61 |
4557 | 5318 | 5.546526 | TCCAATTTCTAACAAAATGGGTGC | 58.453 | 37.500 | 3.37 | 0.00 | 39.71 | 5.01 |
4558 | 5319 | 4.694982 | CCAATTTCTAACAAAATGGGTGCC | 59.305 | 41.667 | 0.00 | 0.00 | 35.69 | 5.01 |
4559 | 5320 | 5.303971 | CAATTTCTAACAAAATGGGTGCCA | 58.696 | 37.500 | 0.00 | 0.00 | 38.19 | 4.92 |
4560 | 5321 | 4.329462 | TTTCTAACAAAATGGGTGCCAC | 57.671 | 40.909 | 0.00 | 0.00 | 35.80 | 5.01 |
4561 | 5322 | 1.883275 | TCTAACAAAATGGGTGCCACG | 59.117 | 47.619 | 0.00 | 0.00 | 35.80 | 4.94 |
4562 | 5323 | 1.883275 | CTAACAAAATGGGTGCCACGA | 59.117 | 47.619 | 0.00 | 0.00 | 35.80 | 4.35 |
4563 | 5324 | 0.387565 | AACAAAATGGGTGCCACGAC | 59.612 | 50.000 | 0.00 | 0.00 | 35.80 | 4.34 |
4564 | 5325 | 1.288752 | CAAAATGGGTGCCACGACC | 59.711 | 57.895 | 0.00 | 0.00 | 35.80 | 4.79 |
4565 | 5326 | 2.265182 | AAAATGGGTGCCACGACCG | 61.265 | 57.895 | 0.00 | 0.00 | 35.80 | 4.79 |
4566 | 5327 | 2.684192 | AAAATGGGTGCCACGACCGA | 62.684 | 55.000 | 0.00 | 0.00 | 35.80 | 4.69 |
4567 | 5328 | 2.478335 | AAATGGGTGCCACGACCGAT | 62.478 | 55.000 | 0.00 | 0.00 | 35.80 | 4.18 |
4568 | 5329 | 2.869503 | AATGGGTGCCACGACCGATC | 62.870 | 60.000 | 0.00 | 0.00 | 35.80 | 3.69 |
4578 | 5339 | 4.978773 | GACCGATCGAGAGTCGTG | 57.021 | 61.111 | 18.66 | 0.00 | 41.35 | 4.35 |
4579 | 5340 | 1.352404 | GACCGATCGAGAGTCGTGG | 59.648 | 63.158 | 18.66 | 0.00 | 41.35 | 4.94 |
4580 | 5341 | 2.024871 | CCGATCGAGAGTCGTGGC | 59.975 | 66.667 | 18.66 | 0.00 | 41.35 | 5.01 |
4581 | 5342 | 2.351322 | CGATCGAGAGTCGTGGCG | 60.351 | 66.667 | 10.26 | 0.00 | 41.35 | 5.69 |
4582 | 5343 | 2.810012 | CGATCGAGAGTCGTGGCGA | 61.810 | 63.158 | 10.26 | 0.00 | 41.35 | 5.54 |
4583 | 5344 | 1.649815 | GATCGAGAGTCGTGGCGAT | 59.350 | 57.895 | 11.19 | 11.19 | 45.07 | 4.58 |
4584 | 5345 | 0.029567 | GATCGAGAGTCGTGGCGATT | 59.970 | 55.000 | 12.17 | 0.00 | 42.78 | 3.34 |
4585 | 5346 | 0.248661 | ATCGAGAGTCGTGGCGATTG | 60.249 | 55.000 | 0.00 | 0.00 | 40.18 | 2.67 |
4586 | 5347 | 1.154016 | CGAGAGTCGTGGCGATTGT | 60.154 | 57.895 | 0.00 | 0.00 | 38.42 | 2.71 |
4587 | 5348 | 0.732880 | CGAGAGTCGTGGCGATTGTT | 60.733 | 55.000 | 0.00 | 0.00 | 38.42 | 2.83 |
4588 | 5349 | 0.992802 | GAGAGTCGTGGCGATTGTTC | 59.007 | 55.000 | 0.00 | 0.00 | 38.42 | 3.18 |
4589 | 5350 | 0.389948 | AGAGTCGTGGCGATTGTTCC | 60.390 | 55.000 | 0.00 | 0.00 | 38.42 | 3.62 |
4590 | 5351 | 0.669318 | GAGTCGTGGCGATTGTTCCA | 60.669 | 55.000 | 0.00 | 0.00 | 38.42 | 3.53 |
4591 | 5352 | 0.670546 | AGTCGTGGCGATTGTTCCAG | 60.671 | 55.000 | 0.00 | 0.00 | 38.42 | 3.86 |
4592 | 5353 | 0.669318 | GTCGTGGCGATTGTTCCAGA | 60.669 | 55.000 | 0.00 | 0.00 | 38.42 | 3.86 |
4593 | 5354 | 0.389817 | TCGTGGCGATTGTTCCAGAG | 60.390 | 55.000 | 0.00 | 0.00 | 32.15 | 3.35 |
4594 | 5355 | 1.361668 | CGTGGCGATTGTTCCAGAGG | 61.362 | 60.000 | 0.00 | 0.00 | 32.15 | 3.69 |
4595 | 5356 | 0.321653 | GTGGCGATTGTTCCAGAGGT | 60.322 | 55.000 | 0.00 | 0.00 | 32.15 | 3.85 |
4596 | 5357 | 0.400213 | TGGCGATTGTTCCAGAGGTT | 59.600 | 50.000 | 0.00 | 0.00 | 0.00 | 3.50 |
4597 | 5358 | 0.804989 | GGCGATTGTTCCAGAGGTTG | 59.195 | 55.000 | 0.00 | 0.00 | 0.00 | 3.77 |
4611 | 5372 | 4.373116 | GTTGGCGACCTCCGAGCA | 62.373 | 66.667 | 0.00 | 0.00 | 41.76 | 4.26 |
4612 | 5373 | 4.069232 | TTGGCGACCTCCGAGCAG | 62.069 | 66.667 | 0.00 | 0.00 | 41.76 | 4.24 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
24 | 25 | 1.617947 | CGAAAGGTAGGAGGCAGGCT | 61.618 | 60.000 | 0.00 | 0.00 | 0.00 | 4.58 |
61 | 62 | 6.648192 | AGGATTTGTCCAGATACAAGAGAAG | 58.352 | 40.000 | 0.00 | 0.00 | 40.29 | 2.85 |
69 | 70 | 4.372656 | CGGAAGAGGATTTGTCCAGATAC | 58.627 | 47.826 | 0.00 | 0.00 | 0.00 | 2.24 |
108 | 109 | 1.569493 | CGGTTTCCAGAAGTGTGCG | 59.431 | 57.895 | 0.00 | 0.00 | 0.00 | 5.34 |
306 | 310 | 6.414408 | AATTGATCTGCGTGAGAAAACTAG | 57.586 | 37.500 | 0.00 | 0.00 | 33.12 | 2.57 |
309 | 313 | 6.170675 | ACTAATTGATCTGCGTGAGAAAAC | 57.829 | 37.500 | 0.00 | 0.00 | 33.12 | 2.43 |
314 | 318 | 5.812642 | AGGTTAACTAATTGATCTGCGTGAG | 59.187 | 40.000 | 5.42 | 0.00 | 0.00 | 3.51 |
317 | 321 | 7.040686 | ACAAAAGGTTAACTAATTGATCTGCGT | 60.041 | 33.333 | 18.12 | 0.00 | 33.03 | 5.24 |
319 | 323 | 8.915654 | CAACAAAAGGTTAACTAATTGATCTGC | 58.084 | 33.333 | 18.12 | 0.00 | 37.72 | 4.26 |
320 | 324 | 8.915654 | GCAACAAAAGGTTAACTAATTGATCTG | 58.084 | 33.333 | 18.12 | 13.89 | 37.72 | 2.90 |
322 | 326 | 8.810652 | TGCAACAAAAGGTTAACTAATTGATC | 57.189 | 30.769 | 18.12 | 0.00 | 37.72 | 2.92 |
324 | 328 | 7.223777 | GCTTGCAACAAAAGGTTAACTAATTGA | 59.776 | 33.333 | 18.12 | 1.33 | 37.72 | 2.57 |
325 | 329 | 7.010923 | TGCTTGCAACAAAAGGTTAACTAATTG | 59.989 | 33.333 | 5.42 | 10.15 | 37.72 | 2.32 |
326 | 330 | 7.044798 | TGCTTGCAACAAAAGGTTAACTAATT | 58.955 | 30.769 | 5.42 | 0.00 | 37.72 | 1.40 |
327 | 331 | 6.578023 | TGCTTGCAACAAAAGGTTAACTAAT | 58.422 | 32.000 | 5.42 | 0.00 | 37.72 | 1.73 |
328 | 332 | 5.967088 | TGCTTGCAACAAAAGGTTAACTAA | 58.033 | 33.333 | 5.42 | 0.00 | 37.72 | 2.24 |
336 | 340 | 4.405196 | CAAGTTTTGCTTGCAACAAAAGG | 58.595 | 39.130 | 26.14 | 19.06 | 46.68 | 3.11 |
400 | 404 | 2.787866 | CTCCCTCCCTCCCTCCAA | 59.212 | 66.667 | 0.00 | 0.00 | 0.00 | 3.53 |
404 | 409 | 3.039526 | CTCCCTCCCTCCCTCCCT | 61.040 | 72.222 | 0.00 | 0.00 | 0.00 | 4.20 |
405 | 410 | 4.179599 | CCTCCCTCCCTCCCTCCC | 62.180 | 77.778 | 0.00 | 0.00 | 0.00 | 4.30 |
406 | 411 | 4.179599 | CCCTCCCTCCCTCCCTCC | 62.180 | 77.778 | 0.00 | 0.00 | 0.00 | 4.30 |
407 | 412 | 3.036959 | TCCCTCCCTCCCTCCCTC | 61.037 | 72.222 | 0.00 | 0.00 | 0.00 | 4.30 |
408 | 413 | 3.039526 | CTCCCTCCCTCCCTCCCT | 61.040 | 72.222 | 0.00 | 0.00 | 0.00 | 4.20 |
409 | 414 | 4.179599 | CCTCCCTCCCTCCCTCCC | 62.180 | 77.778 | 0.00 | 0.00 | 0.00 | 4.30 |
410 | 415 | 4.179599 | CCCTCCCTCCCTCCCTCC | 62.180 | 77.778 | 0.00 | 0.00 | 0.00 | 4.30 |
411 | 416 | 2.416923 | ATCCCTCCCTCCCTCCCTC | 61.417 | 68.421 | 0.00 | 0.00 | 0.00 | 4.30 |
412 | 417 | 2.289979 | ATCCCTCCCTCCCTCCCT | 60.290 | 66.667 | 0.00 | 0.00 | 0.00 | 4.20 |
413 | 418 | 2.122189 | CATCCCTCCCTCCCTCCC | 60.122 | 72.222 | 0.00 | 0.00 | 0.00 | 4.30 |
414 | 419 | 2.122189 | CCATCCCTCCCTCCCTCC | 60.122 | 72.222 | 0.00 | 0.00 | 0.00 | 4.30 |
415 | 420 | 0.104197 | ATTCCATCCCTCCCTCCCTC | 60.104 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
416 | 421 | 0.402566 | CATTCCATCCCTCCCTCCCT | 60.403 | 60.000 | 0.00 | 0.00 | 0.00 | 4.20 |
441 | 446 | 0.543749 | CTGGAGAATGGGACCAGGTC | 59.456 | 60.000 | 11.70 | 11.70 | 44.96 | 3.85 |
442 | 447 | 2.702093 | CTGGAGAATGGGACCAGGT | 58.298 | 57.895 | 0.00 | 0.00 | 44.96 | 4.00 |
457 | 462 | 0.040958 | GCACGCAAGACAAAGTCTGG | 60.041 | 55.000 | 0.00 | 0.00 | 42.59 | 3.86 |
509 | 514 | 2.124403 | GGGGCCATGTGAGCTCTG | 60.124 | 66.667 | 16.19 | 4.79 | 0.00 | 3.35 |
536 | 544 | 0.678048 | GCAGGCCGTCAAGAGGAAAT | 60.678 | 55.000 | 0.00 | 0.00 | 0.00 | 2.17 |
542 | 550 | 2.604686 | AGAGGCAGGCCGTCAAGA | 60.605 | 61.111 | 4.37 | 0.00 | 41.95 | 3.02 |
550 | 558 | 1.078567 | CCACAAGAGAGAGGCAGGC | 60.079 | 63.158 | 0.00 | 0.00 | 0.00 | 4.85 |
568 | 576 | 1.739667 | GAACCCACAAGGCCACAAC | 59.260 | 57.895 | 5.01 | 0.00 | 40.58 | 3.32 |
593 | 601 | 4.074526 | TCGAGTGGCCAGCTCAGC | 62.075 | 66.667 | 25.32 | 8.13 | 33.45 | 4.26 |
594 | 602 | 2.183811 | CTCGAGTGGCCAGCTCAG | 59.816 | 66.667 | 25.32 | 19.66 | 33.45 | 3.35 |
595 | 603 | 2.283173 | TCTCGAGTGGCCAGCTCA | 60.283 | 61.111 | 25.32 | 15.84 | 33.45 | 4.26 |
596 | 604 | 2.159819 | TTGTCTCGAGTGGCCAGCTC | 62.160 | 60.000 | 5.11 | 15.24 | 0.00 | 4.09 |
597 | 605 | 2.164865 | CTTGTCTCGAGTGGCCAGCT | 62.165 | 60.000 | 5.11 | 6.62 | 0.00 | 4.24 |
660 | 668 | 2.677524 | GCCATGGGAGCAACTGCA | 60.678 | 61.111 | 15.13 | 0.00 | 45.16 | 4.41 |
719 | 737 | 9.014297 | AGCATTAATTTAACTCAACAGTAAGCT | 57.986 | 29.630 | 0.00 | 0.00 | 30.14 | 3.74 |
851 | 869 | 0.681175 | AACATCAAAGCAACTGGGCC | 59.319 | 50.000 | 0.00 | 0.00 | 0.00 | 5.80 |
944 | 979 | 0.404426 | AAGTTGAGCTAACCCACCCC | 59.596 | 55.000 | 0.00 | 0.00 | 40.24 | 4.95 |
946 | 981 | 1.270678 | ACGAAGTTGAGCTAACCCACC | 60.271 | 52.381 | 0.00 | 0.00 | 37.78 | 4.61 |
1491 | 1538 | 3.528370 | CCGTCTTCTCCGGCCGAT | 61.528 | 66.667 | 30.73 | 0.00 | 38.85 | 4.18 |
1492 | 1539 | 4.728110 | TCCGTCTTCTCCGGCCGA | 62.728 | 66.667 | 30.73 | 12.25 | 45.09 | 5.54 |
1722 | 1775 | 6.352016 | TCAAGATTCAGAAGCAGAAGTAGT | 57.648 | 37.500 | 0.31 | 0.00 | 0.00 | 2.73 |
1833 | 1889 | 8.993852 | AGTAAAATCTCAATCGATTTAATGCG | 57.006 | 30.769 | 8.21 | 0.00 | 41.42 | 4.73 |
1834 | 1890 | 9.387123 | GGAGTAAAATCTCAATCGATTTAATGC | 57.613 | 33.333 | 8.21 | 0.00 | 41.42 | 3.56 |
1899 | 1966 | 8.786826 | TCTCAGGTTTAATTACTGTAATGGTG | 57.213 | 34.615 | 13.42 | 5.97 | 34.02 | 4.17 |
1908 | 1975 | 8.989980 | GCGCTATTATTCTCAGGTTTAATTACT | 58.010 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
1909 | 1976 | 8.770828 | TGCGCTATTATTCTCAGGTTTAATTAC | 58.229 | 33.333 | 9.73 | 0.00 | 0.00 | 1.89 |
1910 | 1977 | 8.770828 | GTGCGCTATTATTCTCAGGTTTAATTA | 58.229 | 33.333 | 9.73 | 0.00 | 0.00 | 1.40 |
1912 | 1979 | 6.073765 | CGTGCGCTATTATTCTCAGGTTTAAT | 60.074 | 38.462 | 9.73 | 0.00 | 0.00 | 1.40 |
1913 | 1980 | 5.233476 | CGTGCGCTATTATTCTCAGGTTTAA | 59.767 | 40.000 | 9.73 | 0.00 | 0.00 | 1.52 |
2038 | 2457 | 4.846779 | TGCCAAAAGACTTATCACCAAC | 57.153 | 40.909 | 0.00 | 0.00 | 0.00 | 3.77 |
2099 | 2521 | 3.136077 | AGGCAATATCATGAGCTGACTGT | 59.864 | 43.478 | 8.62 | 0.00 | 36.48 | 3.55 |
2104 | 2526 | 2.227194 | TGCAGGCAATATCATGAGCTG | 58.773 | 47.619 | 0.09 | 0.00 | 0.00 | 4.24 |
2123 | 2545 | 9.599322 | CTTAGTTGTTAAGCACTTTTGTAGATG | 57.401 | 33.333 | 0.00 | 0.00 | 32.89 | 2.90 |
2147 | 2569 | 4.323553 | AGCGTGAGAACTTACTCAACTT | 57.676 | 40.909 | 0.00 | 0.00 | 46.34 | 2.66 |
2148 | 2570 | 4.051922 | CAAGCGTGAGAACTTACTCAACT | 58.948 | 43.478 | 0.00 | 0.00 | 46.34 | 3.16 |
2149 | 2571 | 3.363084 | GCAAGCGTGAGAACTTACTCAAC | 60.363 | 47.826 | 2.99 | 0.00 | 46.34 | 3.18 |
2150 | 2572 | 2.800544 | GCAAGCGTGAGAACTTACTCAA | 59.199 | 45.455 | 2.99 | 0.00 | 46.34 | 3.02 |
2151 | 2573 | 2.223947 | TGCAAGCGTGAGAACTTACTCA | 60.224 | 45.455 | 2.99 | 0.00 | 43.39 | 3.41 |
2152 | 2574 | 2.404215 | TGCAAGCGTGAGAACTTACTC | 58.596 | 47.619 | 2.99 | 0.00 | 37.42 | 2.59 |
2270 | 2692 | 5.189736 | TGATGAAATACTAGCTTCCCACTGT | 59.810 | 40.000 | 0.00 | 0.00 | 0.00 | 3.55 |
2272 | 2694 | 5.957771 | TGATGAAATACTAGCTTCCCACT | 57.042 | 39.130 | 0.00 | 0.00 | 0.00 | 4.00 |
2286 | 2708 | 5.121768 | GCTGCAGCAAAAGAAATGATGAAAT | 59.878 | 36.000 | 33.36 | 0.00 | 36.32 | 2.17 |
2310 | 2732 | 5.575606 | GCTTCAATGACAAATGAACCTGATG | 59.424 | 40.000 | 3.61 | 0.00 | 32.46 | 3.07 |
2324 | 2746 | 9.304731 | TGCAAAATCATTAATAGCTTCAATGAC | 57.695 | 29.630 | 15.45 | 7.09 | 40.45 | 3.06 |
2437 | 2865 | 0.981183 | ACGCTGTATTCCCTTGGTCA | 59.019 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
2790 | 3218 | 0.603707 | CAGTGGAGTCATGCCGTTGT | 60.604 | 55.000 | 0.00 | 0.00 | 0.00 | 3.32 |
2806 | 3234 | 3.620966 | GCTGCTTCCTCAGTAAATCCAGT | 60.621 | 47.826 | 0.00 | 0.00 | 36.49 | 4.00 |
2824 | 3252 | 3.873883 | GATGCTGTCTGCGGCTGC | 61.874 | 66.667 | 11.65 | 11.65 | 46.77 | 5.25 |
2980 | 3408 | 3.287867 | TGGAGGAAAATCTCAGCATCC | 57.712 | 47.619 | 0.00 | 0.00 | 35.58 | 3.51 |
2983 | 3411 | 2.372264 | GCATGGAGGAAAATCTCAGCA | 58.628 | 47.619 | 0.00 | 0.00 | 35.58 | 4.41 |
3079 | 3513 | 0.605589 | GTCCCAGGGTTCCAAGTTCG | 60.606 | 60.000 | 5.01 | 0.00 | 0.00 | 3.95 |
3097 | 3531 | 2.327325 | TCAGCCTCTTAAGACCAGGT | 57.673 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
3142 | 3576 | 1.134461 | CATCTGAGCAGGACCTTGAGG | 60.134 | 57.143 | 0.00 | 0.00 | 42.17 | 3.86 |
3189 | 3623 | 3.338250 | ATTCCTTGGGGCTGCCGA | 61.338 | 61.111 | 13.40 | 0.26 | 0.00 | 5.54 |
3357 | 3791 | 2.256591 | GGCAGTGTGTGGTCAGCTG | 61.257 | 63.158 | 7.63 | 7.63 | 33.73 | 4.24 |
3364 | 3798 | 1.446907 | GAGATTCAGGCAGTGTGTGG | 58.553 | 55.000 | 0.00 | 0.00 | 0.00 | 4.17 |
3474 | 3908 | 1.229975 | TGTGTGCCTGATCAACGCAG | 61.230 | 55.000 | 15.54 | 0.00 | 32.08 | 5.18 |
3479 | 3913 | 1.955778 | CTTTGGTGTGTGCCTGATCAA | 59.044 | 47.619 | 0.00 | 0.00 | 0.00 | 2.57 |
3549 | 3983 | 1.321805 | TGAATCCCCCAATTGCGCTG | 61.322 | 55.000 | 9.73 | 0.00 | 0.00 | 5.18 |
3663 | 4097 | 5.520022 | TGTAACTTTTAAGCGTCGAATCC | 57.480 | 39.130 | 0.00 | 0.00 | 0.00 | 3.01 |
3671 | 4105 | 5.062308 | CCAGAGTAGCTGTAACTTTTAAGCG | 59.938 | 44.000 | 0.00 | 0.00 | 43.33 | 4.68 |
3716 | 4156 | 3.698289 | AGGACTCCGACAATGAAGACTA | 58.302 | 45.455 | 0.00 | 0.00 | 0.00 | 2.59 |
3721 | 4161 | 2.549992 | CCACAAGGACTCCGACAATGAA | 60.550 | 50.000 | 0.00 | 0.00 | 36.89 | 2.57 |
3729 | 4169 | 1.343465 | AGTAACACCACAAGGACTCCG | 59.657 | 52.381 | 0.00 | 0.00 | 38.69 | 4.63 |
3730 | 4170 | 2.367567 | TCAGTAACACCACAAGGACTCC | 59.632 | 50.000 | 0.00 | 0.00 | 38.69 | 3.85 |
3737 | 4177 | 1.071699 | GCCTCCTCAGTAACACCACAA | 59.928 | 52.381 | 0.00 | 0.00 | 0.00 | 3.33 |
3752 | 4192 | 2.171840 | TGATTAGCTATCTCGGCCTCC | 58.828 | 52.381 | 0.00 | 0.00 | 34.17 | 4.30 |
3797 | 4237 | 2.147958 | GCACACTAACATTGGAACCGA | 58.852 | 47.619 | 0.00 | 0.00 | 0.00 | 4.69 |
3803 | 4243 | 4.050553 | CACAAAAGGCACACTAACATTGG | 58.949 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
3951 | 4391 | 1.004080 | CCAGAGGTGAGCACTGTGG | 60.004 | 63.158 | 10.21 | 0.00 | 42.08 | 4.17 |
3954 | 4394 | 1.193323 | AGATCCAGAGGTGAGCACTG | 58.807 | 55.000 | 2.02 | 2.02 | 0.00 | 3.66 |
4310 | 5071 | 4.396478 | CCCCCGCAAAAAGAAAAAGAAAAA | 59.604 | 37.500 | 0.00 | 0.00 | 0.00 | 1.94 |
4311 | 5072 | 3.942115 | CCCCCGCAAAAAGAAAAAGAAAA | 59.058 | 39.130 | 0.00 | 0.00 | 0.00 | 2.29 |
4312 | 5073 | 3.197983 | TCCCCCGCAAAAAGAAAAAGAAA | 59.802 | 39.130 | 0.00 | 0.00 | 0.00 | 2.52 |
4313 | 5074 | 2.766828 | TCCCCCGCAAAAAGAAAAAGAA | 59.233 | 40.909 | 0.00 | 0.00 | 0.00 | 2.52 |
4314 | 5075 | 2.389715 | TCCCCCGCAAAAAGAAAAAGA | 58.610 | 42.857 | 0.00 | 0.00 | 0.00 | 2.52 |
4315 | 5076 | 2.900716 | TCCCCCGCAAAAAGAAAAAG | 57.099 | 45.000 | 0.00 | 0.00 | 0.00 | 2.27 |
4316 | 5077 | 3.629142 | TTTCCCCCGCAAAAAGAAAAA | 57.371 | 38.095 | 0.00 | 0.00 | 0.00 | 1.94 |
4317 | 5078 | 3.847671 | ATTTCCCCCGCAAAAAGAAAA | 57.152 | 38.095 | 0.00 | 0.00 | 30.86 | 2.29 |
4318 | 5079 | 5.012148 | TCAATATTTCCCCCGCAAAAAGAAA | 59.988 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
4319 | 5080 | 4.528596 | TCAATATTTCCCCCGCAAAAAGAA | 59.471 | 37.500 | 0.00 | 0.00 | 0.00 | 2.52 |
4320 | 5081 | 4.090090 | TCAATATTTCCCCCGCAAAAAGA | 58.910 | 39.130 | 0.00 | 0.00 | 0.00 | 2.52 |
4321 | 5082 | 4.159506 | TCTCAATATTTCCCCCGCAAAAAG | 59.840 | 41.667 | 0.00 | 0.00 | 0.00 | 2.27 |
4322 | 5083 | 4.090090 | TCTCAATATTTCCCCCGCAAAAA | 58.910 | 39.130 | 0.00 | 0.00 | 0.00 | 1.94 |
4323 | 5084 | 3.699038 | CTCTCAATATTTCCCCCGCAAAA | 59.301 | 43.478 | 0.00 | 0.00 | 0.00 | 2.44 |
4324 | 5085 | 3.287222 | CTCTCAATATTTCCCCCGCAAA | 58.713 | 45.455 | 0.00 | 0.00 | 0.00 | 3.68 |
4325 | 5086 | 2.930950 | CTCTCAATATTTCCCCCGCAA | 58.069 | 47.619 | 0.00 | 0.00 | 0.00 | 4.85 |
4326 | 5087 | 1.476833 | GCTCTCAATATTTCCCCCGCA | 60.477 | 52.381 | 0.00 | 0.00 | 0.00 | 5.69 |
4327 | 5088 | 1.202818 | AGCTCTCAATATTTCCCCCGC | 60.203 | 52.381 | 0.00 | 0.00 | 0.00 | 6.13 |
4328 | 5089 | 2.938956 | AGCTCTCAATATTTCCCCCG | 57.061 | 50.000 | 0.00 | 0.00 | 0.00 | 5.73 |
4329 | 5090 | 7.945109 | AGTAATAAAGCTCTCAATATTTCCCCC | 59.055 | 37.037 | 0.00 | 0.00 | 0.00 | 5.40 |
4330 | 5091 | 8.926092 | AGTAATAAAGCTCTCAATATTTCCCC | 57.074 | 34.615 | 0.00 | 0.00 | 0.00 | 4.81 |
4346 | 5107 | 5.893143 | GCGAACGCTTTCAAGTAATAAAG | 57.107 | 39.130 | 11.97 | 0.00 | 38.26 | 1.85 |
4362 | 5123 | 3.114616 | CTGACTGCCCAGCGAACG | 61.115 | 66.667 | 0.00 | 0.00 | 0.00 | 3.95 |
4380 | 5141 | 4.802248 | GCTTCCTGATCAGTAGCCTATTGG | 60.802 | 50.000 | 25.53 | 9.20 | 31.81 | 3.16 |
4381 | 5142 | 4.040217 | AGCTTCCTGATCAGTAGCCTATTG | 59.960 | 45.833 | 29.24 | 11.73 | 35.85 | 1.90 |
4382 | 5143 | 4.230455 | AGCTTCCTGATCAGTAGCCTATT | 58.770 | 43.478 | 29.24 | 16.65 | 35.85 | 1.73 |
4383 | 5144 | 3.855668 | AGCTTCCTGATCAGTAGCCTAT | 58.144 | 45.455 | 29.24 | 16.90 | 35.85 | 2.57 |
4384 | 5145 | 3.320610 | AGCTTCCTGATCAGTAGCCTA | 57.679 | 47.619 | 29.24 | 8.63 | 35.85 | 3.93 |
4385 | 5146 | 2.173126 | AGCTTCCTGATCAGTAGCCT | 57.827 | 50.000 | 29.24 | 19.61 | 35.85 | 4.58 |
4386 | 5147 | 2.298729 | CCTAGCTTCCTGATCAGTAGCC | 59.701 | 54.545 | 29.24 | 18.31 | 35.85 | 3.93 |
4387 | 5148 | 3.226777 | TCCTAGCTTCCTGATCAGTAGC | 58.773 | 50.000 | 27.28 | 27.28 | 35.63 | 3.58 |
4388 | 5149 | 4.469657 | ACTCCTAGCTTCCTGATCAGTAG | 58.530 | 47.826 | 21.11 | 17.43 | 0.00 | 2.57 |
4389 | 5150 | 4.528076 | ACTCCTAGCTTCCTGATCAGTA | 57.472 | 45.455 | 21.11 | 2.36 | 0.00 | 2.74 |
4390 | 5151 | 3.396685 | ACTCCTAGCTTCCTGATCAGT | 57.603 | 47.619 | 21.11 | 5.03 | 0.00 | 3.41 |
4391 | 5152 | 4.469657 | AGTACTCCTAGCTTCCTGATCAG | 58.530 | 47.826 | 16.24 | 16.24 | 0.00 | 2.90 |
4392 | 5153 | 4.528076 | AGTACTCCTAGCTTCCTGATCA | 57.472 | 45.455 | 0.00 | 0.00 | 0.00 | 2.92 |
4393 | 5154 | 5.506649 | CGAAAGTACTCCTAGCTTCCTGATC | 60.507 | 48.000 | 0.00 | 0.00 | 0.00 | 2.92 |
4394 | 5155 | 4.339814 | CGAAAGTACTCCTAGCTTCCTGAT | 59.660 | 45.833 | 0.00 | 0.00 | 0.00 | 2.90 |
4395 | 5156 | 3.695060 | CGAAAGTACTCCTAGCTTCCTGA | 59.305 | 47.826 | 0.00 | 0.00 | 0.00 | 3.86 |
4396 | 5157 | 3.695060 | TCGAAAGTACTCCTAGCTTCCTG | 59.305 | 47.826 | 0.00 | 0.00 | 0.00 | 3.86 |
4397 | 5158 | 3.965694 | TCGAAAGTACTCCTAGCTTCCT | 58.034 | 45.455 | 0.00 | 0.00 | 0.00 | 3.36 |
4398 | 5159 | 4.261698 | GGATCGAAAGTACTCCTAGCTTCC | 60.262 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
4399 | 5160 | 4.338682 | TGGATCGAAAGTACTCCTAGCTTC | 59.661 | 45.833 | 0.00 | 0.00 | 0.00 | 3.86 |
4400 | 5161 | 4.279145 | TGGATCGAAAGTACTCCTAGCTT | 58.721 | 43.478 | 0.00 | 0.00 | 0.00 | 3.74 |
4401 | 5162 | 3.886505 | CTGGATCGAAAGTACTCCTAGCT | 59.113 | 47.826 | 0.00 | 0.00 | 0.00 | 3.32 |
4402 | 5163 | 3.551250 | GCTGGATCGAAAGTACTCCTAGC | 60.551 | 52.174 | 0.00 | 5.84 | 0.00 | 3.42 |
4403 | 5164 | 3.886505 | AGCTGGATCGAAAGTACTCCTAG | 59.113 | 47.826 | 0.00 | 0.46 | 0.00 | 3.02 |
4404 | 5165 | 3.899726 | AGCTGGATCGAAAGTACTCCTA | 58.100 | 45.455 | 0.00 | 0.00 | 0.00 | 2.94 |
4405 | 5166 | 2.741145 | AGCTGGATCGAAAGTACTCCT | 58.259 | 47.619 | 0.00 | 0.00 | 0.00 | 3.69 |
4406 | 5167 | 3.528597 | AAGCTGGATCGAAAGTACTCC | 57.471 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
4407 | 5168 | 3.548268 | CGAAAGCTGGATCGAAAGTACTC | 59.452 | 47.826 | 10.36 | 0.00 | 41.43 | 2.59 |
4408 | 5169 | 3.512680 | CGAAAGCTGGATCGAAAGTACT | 58.487 | 45.455 | 10.36 | 0.00 | 41.43 | 2.73 |
4409 | 5170 | 2.603560 | CCGAAAGCTGGATCGAAAGTAC | 59.396 | 50.000 | 15.87 | 0.00 | 41.43 | 2.73 |
4410 | 5171 | 2.232941 | ACCGAAAGCTGGATCGAAAGTA | 59.767 | 45.455 | 15.87 | 0.00 | 41.43 | 2.24 |
4411 | 5172 | 1.002087 | ACCGAAAGCTGGATCGAAAGT | 59.998 | 47.619 | 15.87 | 5.30 | 41.43 | 2.66 |
4412 | 5173 | 1.661112 | GACCGAAAGCTGGATCGAAAG | 59.339 | 52.381 | 15.87 | 4.79 | 41.43 | 2.62 |
4413 | 5174 | 1.001520 | TGACCGAAAGCTGGATCGAAA | 59.998 | 47.619 | 15.87 | 1.73 | 41.43 | 3.46 |
4414 | 5175 | 0.606096 | TGACCGAAAGCTGGATCGAA | 59.394 | 50.000 | 15.87 | 2.02 | 41.43 | 3.71 |
4415 | 5176 | 0.108804 | GTGACCGAAAGCTGGATCGA | 60.109 | 55.000 | 15.87 | 0.00 | 41.43 | 3.59 |
4416 | 5177 | 1.413767 | CGTGACCGAAAGCTGGATCG | 61.414 | 60.000 | 9.22 | 9.22 | 38.74 | 3.69 |
4417 | 5178 | 0.389948 | ACGTGACCGAAAGCTGGATC | 60.390 | 55.000 | 0.00 | 0.00 | 37.88 | 3.36 |
4418 | 5179 | 0.389948 | GACGTGACCGAAAGCTGGAT | 60.390 | 55.000 | 0.00 | 0.00 | 37.88 | 3.41 |
4419 | 5180 | 1.006571 | GACGTGACCGAAAGCTGGA | 60.007 | 57.895 | 0.00 | 0.00 | 37.88 | 3.86 |
4420 | 5181 | 0.878523 | TTGACGTGACCGAAAGCTGG | 60.879 | 55.000 | 0.00 | 0.00 | 37.88 | 4.85 |
4421 | 5182 | 1.148310 | ATTGACGTGACCGAAAGCTG | 58.852 | 50.000 | 0.00 | 0.00 | 37.88 | 4.24 |
4422 | 5183 | 1.531149 | CAATTGACGTGACCGAAAGCT | 59.469 | 47.619 | 0.00 | 0.00 | 37.88 | 3.74 |
4423 | 5184 | 1.263217 | ACAATTGACGTGACCGAAAGC | 59.737 | 47.619 | 13.59 | 0.00 | 37.88 | 3.51 |
4424 | 5185 | 2.903678 | CACAATTGACGTGACCGAAAG | 58.096 | 47.619 | 13.59 | 0.00 | 36.43 | 2.62 |
4425 | 5186 | 1.003331 | GCACAATTGACGTGACCGAAA | 60.003 | 47.619 | 13.59 | 0.00 | 36.43 | 3.46 |
4426 | 5187 | 0.584396 | GCACAATTGACGTGACCGAA | 59.416 | 50.000 | 13.59 | 0.00 | 36.43 | 4.30 |
4427 | 5188 | 0.530870 | TGCACAATTGACGTGACCGA | 60.531 | 50.000 | 13.59 | 0.00 | 36.43 | 4.69 |
4428 | 5189 | 0.306228 | TTGCACAATTGACGTGACCG | 59.694 | 50.000 | 13.59 | 0.00 | 36.43 | 4.79 |
4429 | 5190 | 1.925946 | GCTTGCACAATTGACGTGACC | 60.926 | 52.381 | 13.59 | 0.00 | 36.43 | 4.02 |
4430 | 5191 | 1.002468 | AGCTTGCACAATTGACGTGAC | 60.002 | 47.619 | 13.59 | 0.00 | 36.43 | 3.67 |
4431 | 5192 | 1.308047 | AGCTTGCACAATTGACGTGA | 58.692 | 45.000 | 13.59 | 0.00 | 36.43 | 4.35 |
4432 | 5193 | 1.782569 | CAAGCTTGCACAATTGACGTG | 59.217 | 47.619 | 14.65 | 0.86 | 37.43 | 4.49 |
4433 | 5194 | 2.124011 | CAAGCTTGCACAATTGACGT | 57.876 | 45.000 | 14.65 | 0.00 | 0.00 | 4.34 |
4446 | 5207 | 3.258872 | TCATATTTGTGCCAAGCAAGCTT | 59.741 | 39.130 | 0.59 | 0.59 | 41.47 | 3.74 |
4447 | 5208 | 2.827322 | TCATATTTGTGCCAAGCAAGCT | 59.173 | 40.909 | 0.00 | 0.00 | 41.47 | 3.74 |
4448 | 5209 | 3.184541 | CTCATATTTGTGCCAAGCAAGC | 58.815 | 45.455 | 0.00 | 0.00 | 41.47 | 4.01 |
4449 | 5210 | 3.184541 | GCTCATATTTGTGCCAAGCAAG | 58.815 | 45.455 | 0.00 | 0.00 | 41.47 | 4.01 |
4450 | 5211 | 2.561858 | TGCTCATATTTGTGCCAAGCAA | 59.438 | 40.909 | 7.57 | 0.00 | 41.47 | 3.91 |
4451 | 5212 | 2.164827 | CTGCTCATATTTGTGCCAAGCA | 59.835 | 45.455 | 7.57 | 2.84 | 40.75 | 3.91 |
4452 | 5213 | 2.480759 | CCTGCTCATATTTGTGCCAAGC | 60.481 | 50.000 | 7.57 | 0.00 | 40.75 | 4.01 |
4453 | 5214 | 3.018856 | TCCTGCTCATATTTGTGCCAAG | 58.981 | 45.455 | 7.57 | 0.63 | 40.75 | 3.61 |
4454 | 5215 | 2.754552 | GTCCTGCTCATATTTGTGCCAA | 59.245 | 45.455 | 7.57 | 0.00 | 40.75 | 4.52 |
4455 | 5216 | 2.368439 | GTCCTGCTCATATTTGTGCCA | 58.632 | 47.619 | 7.57 | 0.00 | 40.75 | 4.92 |
4456 | 5217 | 1.678101 | GGTCCTGCTCATATTTGTGCC | 59.322 | 52.381 | 7.57 | 0.00 | 40.75 | 5.01 |
4457 | 5218 | 2.368439 | TGGTCCTGCTCATATTTGTGC | 58.632 | 47.619 | 3.60 | 3.60 | 41.60 | 4.57 |
4458 | 5219 | 5.278169 | GCTAATGGTCCTGCTCATATTTGTG | 60.278 | 44.000 | 0.00 | 0.00 | 0.00 | 3.33 |
4459 | 5220 | 4.823989 | GCTAATGGTCCTGCTCATATTTGT | 59.176 | 41.667 | 0.00 | 0.00 | 0.00 | 2.83 |
4460 | 5221 | 4.217118 | GGCTAATGGTCCTGCTCATATTTG | 59.783 | 45.833 | 0.00 | 0.00 | 0.00 | 2.32 |
4461 | 5222 | 4.401925 | GGCTAATGGTCCTGCTCATATTT | 58.598 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
4462 | 5223 | 3.557898 | CGGCTAATGGTCCTGCTCATATT | 60.558 | 47.826 | 0.00 | 0.00 | 0.00 | 1.28 |
4463 | 5224 | 2.027745 | CGGCTAATGGTCCTGCTCATAT | 60.028 | 50.000 | 0.00 | 0.00 | 0.00 | 1.78 |
4464 | 5225 | 1.344438 | CGGCTAATGGTCCTGCTCATA | 59.656 | 52.381 | 0.00 | 0.00 | 0.00 | 2.15 |
4465 | 5226 | 0.107456 | CGGCTAATGGTCCTGCTCAT | 59.893 | 55.000 | 0.00 | 0.00 | 0.00 | 2.90 |
4466 | 5227 | 0.975556 | TCGGCTAATGGTCCTGCTCA | 60.976 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
4467 | 5228 | 0.394565 | ATCGGCTAATGGTCCTGCTC | 59.605 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
4468 | 5229 | 0.394565 | GATCGGCTAATGGTCCTGCT | 59.605 | 55.000 | 0.00 | 0.00 | 0.00 | 4.24 |
4469 | 5230 | 0.394565 | AGATCGGCTAATGGTCCTGC | 59.605 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
4470 | 5231 | 2.918712 | AAGATCGGCTAATGGTCCTG | 57.081 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
4471 | 5232 | 3.305720 | TGTAAGATCGGCTAATGGTCCT | 58.694 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
4472 | 5233 | 3.746045 | TGTAAGATCGGCTAATGGTCC | 57.254 | 47.619 | 0.00 | 0.00 | 0.00 | 4.46 |
4473 | 5234 | 6.313905 | CCATATTGTAAGATCGGCTAATGGTC | 59.686 | 42.308 | 0.00 | 0.00 | 0.00 | 4.02 |
4474 | 5235 | 6.173339 | CCATATTGTAAGATCGGCTAATGGT | 58.827 | 40.000 | 0.00 | 0.00 | 0.00 | 3.55 |
4475 | 5236 | 5.065218 | GCCATATTGTAAGATCGGCTAATGG | 59.935 | 44.000 | 0.00 | 0.00 | 35.17 | 3.16 |
4476 | 5237 | 5.220472 | CGCCATATTGTAAGATCGGCTAATG | 60.220 | 44.000 | 0.00 | 0.00 | 35.89 | 1.90 |
4477 | 5238 | 4.870426 | CGCCATATTGTAAGATCGGCTAAT | 59.130 | 41.667 | 0.00 | 0.00 | 35.89 | 1.73 |
4478 | 5239 | 4.021807 | TCGCCATATTGTAAGATCGGCTAA | 60.022 | 41.667 | 0.00 | 0.00 | 35.89 | 3.09 |
4479 | 5240 | 3.508402 | TCGCCATATTGTAAGATCGGCTA | 59.492 | 43.478 | 0.00 | 0.00 | 35.89 | 3.93 |
4480 | 5241 | 2.299013 | TCGCCATATTGTAAGATCGGCT | 59.701 | 45.455 | 0.00 | 0.00 | 35.89 | 5.52 |
4481 | 5242 | 2.683968 | TCGCCATATTGTAAGATCGGC | 58.316 | 47.619 | 0.00 | 0.00 | 34.68 | 5.54 |
4482 | 5243 | 6.756542 | TGATATTCGCCATATTGTAAGATCGG | 59.243 | 38.462 | 0.00 | 0.00 | 0.00 | 4.18 |
4483 | 5244 | 7.755582 | TGATATTCGCCATATTGTAAGATCG | 57.244 | 36.000 | 0.00 | 0.00 | 0.00 | 3.69 |
4509 | 5270 | 5.685728 | AGCTCTCTGGTAGTTTCACTTTTT | 58.314 | 37.500 | 0.00 | 0.00 | 0.00 | 1.94 |
4510 | 5271 | 5.071115 | AGAGCTCTCTGGTAGTTTCACTTTT | 59.929 | 40.000 | 11.45 | 0.00 | 38.75 | 2.27 |
4511 | 5272 | 4.591072 | AGAGCTCTCTGGTAGTTTCACTTT | 59.409 | 41.667 | 11.45 | 0.00 | 38.75 | 2.66 |
4512 | 5273 | 4.156477 | AGAGCTCTCTGGTAGTTTCACTT | 58.844 | 43.478 | 11.45 | 0.00 | 38.75 | 3.16 |
4513 | 5274 | 3.761752 | GAGAGCTCTCTGGTAGTTTCACT | 59.238 | 47.826 | 32.25 | 0.00 | 40.61 | 3.41 |
4514 | 5275 | 3.119280 | GGAGAGCTCTCTGGTAGTTTCAC | 60.119 | 52.174 | 36.09 | 16.07 | 42.48 | 3.18 |
4515 | 5276 | 3.093057 | GGAGAGCTCTCTGGTAGTTTCA | 58.907 | 50.000 | 36.09 | 0.00 | 42.48 | 2.69 |
4516 | 5277 | 3.093057 | TGGAGAGCTCTCTGGTAGTTTC | 58.907 | 50.000 | 36.09 | 20.19 | 42.48 | 2.78 |
4517 | 5278 | 3.176924 | TGGAGAGCTCTCTGGTAGTTT | 57.823 | 47.619 | 36.09 | 4.01 | 42.48 | 2.66 |
4518 | 5279 | 2.909504 | TGGAGAGCTCTCTGGTAGTT | 57.090 | 50.000 | 36.09 | 4.80 | 42.48 | 2.24 |
4519 | 5280 | 2.909504 | TTGGAGAGCTCTCTGGTAGT | 57.090 | 50.000 | 36.09 | 5.58 | 42.48 | 2.73 |
4520 | 5281 | 4.405358 | AGAAATTGGAGAGCTCTCTGGTAG | 59.595 | 45.833 | 36.09 | 0.00 | 42.48 | 3.18 |
4521 | 5282 | 4.357325 | AGAAATTGGAGAGCTCTCTGGTA | 58.643 | 43.478 | 36.09 | 21.76 | 42.48 | 3.25 |
4522 | 5283 | 3.180507 | AGAAATTGGAGAGCTCTCTGGT | 58.819 | 45.455 | 36.09 | 21.97 | 42.48 | 4.00 |
4523 | 5284 | 3.910568 | AGAAATTGGAGAGCTCTCTGG | 57.089 | 47.619 | 36.09 | 0.00 | 42.48 | 3.86 |
4524 | 5285 | 5.728471 | TGTTAGAAATTGGAGAGCTCTCTG | 58.272 | 41.667 | 36.09 | 0.00 | 42.48 | 3.35 |
4525 | 5286 | 6.365970 | TTGTTAGAAATTGGAGAGCTCTCT | 57.634 | 37.500 | 36.09 | 20.86 | 42.48 | 3.10 |
4526 | 5287 | 7.440523 | TTTTGTTAGAAATTGGAGAGCTCTC | 57.559 | 36.000 | 31.89 | 31.89 | 42.14 | 3.20 |
4527 | 5288 | 7.094032 | CCATTTTGTTAGAAATTGGAGAGCTCT | 60.094 | 37.037 | 18.28 | 18.28 | 0.00 | 4.09 |
4528 | 5289 | 7.031975 | CCATTTTGTTAGAAATTGGAGAGCTC | 58.968 | 38.462 | 5.27 | 5.27 | 0.00 | 4.09 |
4529 | 5290 | 6.071165 | CCCATTTTGTTAGAAATTGGAGAGCT | 60.071 | 38.462 | 14.63 | 0.00 | 35.08 | 4.09 |
4530 | 5291 | 6.101997 | CCCATTTTGTTAGAAATTGGAGAGC | 58.898 | 40.000 | 14.63 | 0.00 | 35.08 | 4.09 |
4531 | 5292 | 7.092716 | CACCCATTTTGTTAGAAATTGGAGAG | 58.907 | 38.462 | 14.63 | 4.11 | 36.08 | 3.20 |
4532 | 5293 | 6.518200 | GCACCCATTTTGTTAGAAATTGGAGA | 60.518 | 38.462 | 14.63 | 0.00 | 36.08 | 3.71 |
4533 | 5294 | 5.639082 | GCACCCATTTTGTTAGAAATTGGAG | 59.361 | 40.000 | 14.63 | 9.29 | 36.08 | 3.86 |
4534 | 5295 | 5.512232 | GGCACCCATTTTGTTAGAAATTGGA | 60.512 | 40.000 | 14.63 | 0.00 | 36.08 | 3.53 |
4535 | 5296 | 4.694982 | GGCACCCATTTTGTTAGAAATTGG | 59.305 | 41.667 | 8.28 | 8.28 | 37.65 | 3.16 |
4536 | 5297 | 5.179182 | GTGGCACCCATTTTGTTAGAAATTG | 59.821 | 40.000 | 6.29 | 0.00 | 35.28 | 2.32 |
4537 | 5298 | 5.304778 | GTGGCACCCATTTTGTTAGAAATT | 58.695 | 37.500 | 6.29 | 0.00 | 35.28 | 1.82 |
4538 | 5299 | 4.560513 | CGTGGCACCCATTTTGTTAGAAAT | 60.561 | 41.667 | 12.86 | 0.00 | 35.28 | 2.17 |
4539 | 5300 | 3.243569 | CGTGGCACCCATTTTGTTAGAAA | 60.244 | 43.478 | 12.86 | 0.00 | 35.28 | 2.52 |
4540 | 5301 | 2.294791 | CGTGGCACCCATTTTGTTAGAA | 59.705 | 45.455 | 12.86 | 0.00 | 35.28 | 2.10 |
4541 | 5302 | 1.883275 | CGTGGCACCCATTTTGTTAGA | 59.117 | 47.619 | 12.86 | 0.00 | 35.28 | 2.10 |
4542 | 5303 | 1.883275 | TCGTGGCACCCATTTTGTTAG | 59.117 | 47.619 | 12.86 | 0.00 | 35.28 | 2.34 |
4543 | 5304 | 1.609555 | GTCGTGGCACCCATTTTGTTA | 59.390 | 47.619 | 12.86 | 0.00 | 35.28 | 2.41 |
4544 | 5305 | 0.387565 | GTCGTGGCACCCATTTTGTT | 59.612 | 50.000 | 12.86 | 0.00 | 35.28 | 2.83 |
4545 | 5306 | 1.460273 | GGTCGTGGCACCCATTTTGT | 61.460 | 55.000 | 12.86 | 0.00 | 35.28 | 2.83 |
4546 | 5307 | 1.288752 | GGTCGTGGCACCCATTTTG | 59.711 | 57.895 | 12.86 | 0.00 | 35.28 | 2.44 |
4547 | 5308 | 2.265182 | CGGTCGTGGCACCCATTTT | 61.265 | 57.895 | 12.86 | 0.00 | 35.28 | 1.82 |
4548 | 5309 | 2.478335 | ATCGGTCGTGGCACCCATTT | 62.478 | 55.000 | 12.86 | 0.00 | 35.28 | 2.32 |
4549 | 5310 | 2.869503 | GATCGGTCGTGGCACCCATT | 62.870 | 60.000 | 12.86 | 0.00 | 35.28 | 3.16 |
4550 | 5311 | 3.385749 | GATCGGTCGTGGCACCCAT | 62.386 | 63.158 | 12.86 | 5.03 | 35.28 | 4.00 |
4551 | 5312 | 4.077184 | GATCGGTCGTGGCACCCA | 62.077 | 66.667 | 12.86 | 0.00 | 31.99 | 4.51 |
4561 | 5322 | 1.352404 | CCACGACTCTCGATCGGTC | 59.648 | 63.158 | 16.41 | 13.54 | 43.74 | 4.79 |
4562 | 5323 | 2.762234 | GCCACGACTCTCGATCGGT | 61.762 | 63.158 | 16.41 | 5.10 | 43.74 | 4.69 |
4563 | 5324 | 2.024871 | GCCACGACTCTCGATCGG | 59.975 | 66.667 | 16.41 | 6.26 | 43.74 | 4.18 |
4564 | 5325 | 2.107151 | ATCGCCACGACTCTCGATCG | 62.107 | 60.000 | 9.36 | 9.36 | 43.74 | 3.69 |
4565 | 5326 | 0.029567 | AATCGCCACGACTCTCGATC | 59.970 | 55.000 | 0.00 | 0.00 | 43.74 | 3.69 |
4566 | 5327 | 0.248661 | CAATCGCCACGACTCTCGAT | 60.249 | 55.000 | 0.00 | 0.00 | 43.74 | 3.59 |
4567 | 5328 | 1.136774 | CAATCGCCACGACTCTCGA | 59.863 | 57.895 | 0.00 | 0.00 | 43.74 | 4.04 |
4568 | 5329 | 0.732880 | AACAATCGCCACGACTCTCG | 60.733 | 55.000 | 0.00 | 0.00 | 46.93 | 4.04 |
4569 | 5330 | 0.992802 | GAACAATCGCCACGACTCTC | 59.007 | 55.000 | 0.00 | 0.00 | 39.18 | 3.20 |
4570 | 5331 | 0.389948 | GGAACAATCGCCACGACTCT | 60.390 | 55.000 | 0.00 | 0.00 | 39.18 | 3.24 |
4571 | 5332 | 0.669318 | TGGAACAATCGCCACGACTC | 60.669 | 55.000 | 0.00 | 0.00 | 39.18 | 3.36 |
4572 | 5333 | 0.670546 | CTGGAACAATCGCCACGACT | 60.671 | 55.000 | 0.00 | 0.00 | 39.18 | 4.18 |
4573 | 5334 | 0.669318 | TCTGGAACAATCGCCACGAC | 60.669 | 55.000 | 0.00 | 0.00 | 39.18 | 4.34 |
4574 | 5335 | 0.389817 | CTCTGGAACAATCGCCACGA | 60.390 | 55.000 | 0.00 | 0.00 | 38.70 | 4.35 |
4575 | 5336 | 1.361668 | CCTCTGGAACAATCGCCACG | 61.362 | 60.000 | 0.00 | 0.00 | 38.70 | 4.94 |
4576 | 5337 | 0.321653 | ACCTCTGGAACAATCGCCAC | 60.322 | 55.000 | 0.00 | 0.00 | 38.70 | 5.01 |
4577 | 5338 | 0.400213 | AACCTCTGGAACAATCGCCA | 59.600 | 50.000 | 0.00 | 0.00 | 38.70 | 5.69 |
4578 | 5339 | 0.804989 | CAACCTCTGGAACAATCGCC | 59.195 | 55.000 | 0.00 | 0.00 | 38.70 | 5.54 |
4594 | 5355 | 4.373116 | TGCTCGGAGGTCGCCAAC | 62.373 | 66.667 | 7.20 | 0.00 | 39.05 | 3.77 |
4595 | 5356 | 4.069232 | CTGCTCGGAGGTCGCCAA | 62.069 | 66.667 | 7.20 | 0.00 | 39.05 | 4.52 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.