Multiple sequence alignment - TraesCS3B01G194200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G194200 chr3B 100.000 6686 0 0 1 6686 214553345 214546660 0.000000e+00 12347
1 TraesCS3B01G194200 chr3B 87.651 413 39 8 3518 3927 342869957 342869554 2.820000e-128 470
2 TraesCS3B01G194200 chr3B 88.811 143 12 3 5690 5832 43913044 43913182 8.910000e-39 172
3 TraesCS3B01G194200 chr3B 88.811 143 12 3 5690 5832 44018821 44018959 8.910000e-39 172
4 TraesCS3B01G194200 chr3D 94.215 3561 142 36 1143 4670 147829775 147833304 0.000000e+00 5376
5 TraesCS3B01G194200 chr3D 94.981 1036 33 7 4665 5690 147833382 147834408 0.000000e+00 1607
6 TraesCS3B01G194200 chr3D 89.575 729 36 18 5872 6581 147834457 147835164 0.000000e+00 889
7 TraesCS3B01G194200 chr3D 87.681 552 46 13 1 535 147828252 147828798 2.050000e-174 623
8 TraesCS3B01G194200 chr3D 87.411 421 29 16 597 1004 147828801 147829210 4.720000e-126 462
9 TraesCS3B01G194200 chr3D 95.536 112 4 1 1001 1111 147829240 147829351 1.920000e-40 178
10 TraesCS3B01G194200 chr3A 94.062 2324 92 24 1541 3844 165332551 165330254 0.000000e+00 3485
11 TraesCS3B01G194200 chr3A 93.712 1956 86 13 3761 5692 165330572 165328630 0.000000e+00 2896
12 TraesCS3B01G194200 chr3A 89.756 820 49 11 1 788 165334484 165333668 0.000000e+00 1016
13 TraesCS3B01G194200 chr3A 84.839 620 33 22 1001 1593 165333261 165332676 9.730000e-158 568
14 TraesCS3B01G194200 chr3A 89.086 394 12 5 5872 6264 165328259 165327896 1.700000e-125 460
15 TraesCS3B01G194200 chr3A 89.170 277 7 9 6310 6581 165322553 165322295 2.330000e-84 324
16 TraesCS3B01G194200 chr3A 82.203 236 19 15 778 1004 165333512 165333291 1.480000e-41 182
17 TraesCS3B01G194200 chr1A 91.409 582 21 10 5872 6446 34287788 34288347 0.000000e+00 771
18 TraesCS3B01G194200 chr1A 92.857 280 7 5 5436 5707 34287473 34287747 1.750000e-105 394
19 TraesCS3B01G194200 chr5D 88.225 569 47 17 3517 4078 256469844 256469289 0.000000e+00 662
20 TraesCS3B01G194200 chr2A 86.467 569 60 12 3516 4079 350725844 350725288 5.730000e-170 608
21 TraesCS3B01G194200 chr2A 97.368 114 3 0 5719 5832 301437337 301437224 1.900000e-45 195
22 TraesCS3B01G194200 chr6D 85.841 565 63 12 3517 4076 181693197 181692645 9.660000e-163 584
23 TraesCS3B01G194200 chr6D 85.421 487 56 12 3597 4079 181693353 181692878 6.020000e-135 492
24 TraesCS3B01G194200 chr6A 85.841 565 58 15 3517 4076 235075996 235076543 1.250000e-161 580
25 TraesCS3B01G194200 chr6A 85.216 487 54 12 3597 4079 235075840 235076312 1.010000e-132 484
26 TraesCS3B01G194200 chr6A 97.414 116 3 0 5719 5834 475435168 475435053 1.470000e-46 198
27 TraesCS3B01G194200 chr2D 84.146 574 65 18 3517 4068 485484242 485483673 3.550000e-147 532
28 TraesCS3B01G194200 chr5A 87.451 255 21 7 3517 3769 611031964 611032209 3.950000e-72 283
29 TraesCS3B01G194200 chr1B 98.261 115 1 1 5723 5837 624663027 624662914 4.090000e-47 200
30 TraesCS3B01G194200 chr4A 97.368 114 3 0 5719 5832 557549787 557549900 1.900000e-45 195
31 TraesCS3B01G194200 chr4A 97.368 114 3 0 5719 5832 576122275 576122162 1.900000e-45 195
32 TraesCS3B01G194200 chr6B 96.552 116 4 0 5717 5832 525565727 525565612 6.840000e-45 193
33 TraesCS3B01G194200 chr7D 97.321 112 3 0 5720 5831 44550942 44550831 2.460000e-44 191
34 TraesCS3B01G194200 chr7D 76.106 226 36 13 3308 3522 530735836 530735618 1.190000e-17 102
35 TraesCS3B01G194200 chr7B 80.120 166 28 5 3354 3517 570178827 570178989 1.180000e-22 119
36 TraesCS3B01G194200 chr7A 79.006 181 32 6 3347 3522 611003255 611003434 1.180000e-22 119


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G194200 chr3B 214546660 214553345 6685 True 12347.0 12347 100.0000 1 6686 1 chr3B.!!$R1 6685
1 TraesCS3B01G194200 chr3D 147828252 147835164 6912 False 1522.5 5376 91.5665 1 6581 6 chr3D.!!$F1 6580
2 TraesCS3B01G194200 chr3A 165327896 165334484 6588 True 1434.5 3485 88.9430 1 6264 6 chr3A.!!$R2 6263
3 TraesCS3B01G194200 chr1A 34287473 34288347 874 False 582.5 771 92.1330 5436 6446 2 chr1A.!!$F1 1010
4 TraesCS3B01G194200 chr5D 256469289 256469844 555 True 662.0 662 88.2250 3517 4078 1 chr5D.!!$R1 561
5 TraesCS3B01G194200 chr2A 350725288 350725844 556 True 608.0 608 86.4670 3516 4079 1 chr2A.!!$R2 563
6 TraesCS3B01G194200 chr6D 181692645 181693353 708 True 538.0 584 85.6310 3517 4079 2 chr6D.!!$R1 562
7 TraesCS3B01G194200 chr6A 235075840 235076543 703 False 532.0 580 85.5285 3517 4079 2 chr6A.!!$F1 562
8 TraesCS3B01G194200 chr2D 485483673 485484242 569 True 532.0 532 84.1460 3517 4068 1 chr2D.!!$R1 551

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
393 414 0.028902 GCGTTGAACTTCCGTTGCTT 59.971 50.0 0.00 0.00 32.39 3.91 F
914 1123 0.106719 AAGCGGAGAGAGAGAGAGGG 60.107 60.0 0.00 0.00 0.00 4.30 F
917 1126 0.108585 CGGAGAGAGAGAGAGGGAGG 59.891 65.0 0.00 0.00 0.00 4.30 F
921 1130 0.178990 GAGAGAGAGAGGGAGGAGCC 60.179 65.0 0.00 0.00 0.00 4.70 F
1827 2673 0.179174 GGCGTGCAATTCGGGTTTAG 60.179 55.0 0.00 0.00 0.00 1.85 F
2032 2878 0.397941 TGAAGACAAGCAGGTCAGGG 59.602 55.0 9.96 0.00 40.29 4.45 F
3651 4786 0.482887 TGGGTGGACTCAGAGTCTCA 59.517 55.0 26.51 20.02 44.46 3.27 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1379 2032 0.179145 ATCCTTCTAACACCGCGACG 60.179 55.000 8.23 0.00 0.00 5.12 R
2514 3362 0.108992 CAGTCATGGTGGCACAATGC 60.109 55.000 26.87 21.23 44.16 3.56 R
2717 3568 2.433436 CTTACACTTGGTTAGCACCCC 58.567 52.381 0.00 0.00 43.49 4.95 R
3135 3988 7.089538 TCAAAATCAAATGTGTCGTGCATAAT 58.910 30.769 0.00 0.00 0.00 1.28 R
3835 4971 0.320771 CGTGAGAGGGGGTGTTGAAG 60.321 60.000 0.00 0.00 0.00 3.02 R
3870 5006 0.963962 TCTAAGTCCACCCACGTGTC 59.036 55.000 15.65 0.00 38.41 3.67 R
5861 7434 0.180406 AGCCACGTCTTGTTGGAGTT 59.820 50.000 0.00 0.00 0.00 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 2.388232 GCGGCGGTCGAACTCAAAT 61.388 57.895 6.02 0.00 42.43 2.32
59 60 5.766590 TCCCTCTTCACATACTCATACTCA 58.233 41.667 0.00 0.00 0.00 3.41
65 66 7.315890 TCTTCACATACTCATACTCACTGTTG 58.684 38.462 0.00 0.00 0.00 3.33
79 80 2.033448 GTTGGCCATCACCCGACA 59.967 61.111 6.09 0.00 36.85 4.35
112 113 1.002430 TGTTCTTGGAGCTGCACCTAG 59.998 52.381 18.28 18.28 0.00 3.02
121 122 3.369892 GGAGCTGCACCTAGAGAAAATCA 60.370 47.826 8.98 0.00 0.00 2.57
122 123 4.450053 GAGCTGCACCTAGAGAAAATCAT 58.550 43.478 1.02 0.00 0.00 2.45
171 172 6.395426 TGAACTTGAGTGAAATCTGCATTT 57.605 33.333 0.00 0.00 34.70 2.32
179 180 0.108520 AAATCTGCATTTGGCTGCCG 60.109 50.000 14.98 0.00 45.15 5.69
184 185 2.028733 GCATTTGGCTGCCGGTTTG 61.029 57.895 14.98 9.95 40.25 2.93
237 238 3.750371 CCCTGGTGACATTGTGAAAGTA 58.250 45.455 0.00 0.00 41.51 2.24
241 242 4.385825 TGGTGACATTGTGAAAGTAGGAC 58.614 43.478 0.00 0.00 33.40 3.85
245 246 5.050091 GTGACATTGTGAAAGTAGGACTGTG 60.050 44.000 0.00 0.00 0.00 3.66
251 252 4.238514 GTGAAAGTAGGACTGTGCTAGTG 58.761 47.826 16.07 0.00 40.53 2.74
259 260 3.388024 AGGACTGTGCTAGTGAAGTTGAA 59.612 43.478 0.00 0.00 40.53 2.69
281 282 7.001674 TGAAATTACTACTGTCAAACACCCAT 58.998 34.615 0.00 0.00 0.00 4.00
294 295 2.317040 ACACCCATCCTACCGATACAG 58.683 52.381 0.00 0.00 0.00 2.74
295 296 1.618837 CACCCATCCTACCGATACAGG 59.381 57.143 0.00 0.00 37.30 4.00
296 297 1.502039 ACCCATCCTACCGATACAGGA 59.498 52.381 0.00 0.00 44.90 3.86
354 375 1.465777 GGACATTGCAATGCTTTTGCC 59.534 47.619 33.94 22.03 46.87 4.52
368 389 4.129380 GCTTTTGCCCTTTCTGTTTGAAT 58.871 39.130 0.00 0.00 40.15 2.57
376 397 2.975410 TTCTGTTTGAATGCTGAGCG 57.025 45.000 0.00 0.00 0.00 5.03
382 403 2.686558 TTGAATGCTGAGCGTTGAAC 57.313 45.000 17.74 3.06 37.94 3.18
393 414 0.028902 GCGTTGAACTTCCGTTGCTT 59.971 50.000 0.00 0.00 32.39 3.91
406 427 3.432933 TCCGTTGCTTCGTTATTGGTTAC 59.567 43.478 0.00 0.00 0.00 2.50
408 429 4.142773 CCGTTGCTTCGTTATTGGTTACAT 60.143 41.667 0.00 0.00 0.00 2.29
410 431 5.955496 CGTTGCTTCGTTATTGGTTACATAC 59.045 40.000 0.00 0.00 0.00 2.39
411 432 6.401260 CGTTGCTTCGTTATTGGTTACATACA 60.401 38.462 0.00 0.00 0.00 2.29
412 433 6.656314 TGCTTCGTTATTGGTTACATACAG 57.344 37.500 0.00 0.00 0.00 2.74
413 434 6.167685 TGCTTCGTTATTGGTTACATACAGT 58.832 36.000 0.00 0.00 0.00 3.55
424 448 0.454600 ACATACAGTAGTCGTGCGGG 59.545 55.000 0.00 0.00 0.00 6.13
444 468 1.269448 GCGCATGGAAAAAGAACAGGA 59.731 47.619 0.30 0.00 0.00 3.86
453 477 5.163322 TGGAAAAAGAACAGGACATTGCAAT 60.163 36.000 5.99 5.99 0.00 3.56
462 486 2.303600 AGGACATTGCAATTTGGCATGT 59.696 40.909 9.83 4.02 44.48 3.21
482 506 1.168714 AGACGTACCTAACCGTGTCC 58.831 55.000 0.00 0.00 37.44 4.02
492 516 4.308458 CCGTGTCCACCTTGCCGA 62.308 66.667 0.00 0.00 0.00 5.54
610 634 0.673437 GATTCAGAGAGAGAGGCGGG 59.327 60.000 0.00 0.00 0.00 6.13
611 635 0.260230 ATTCAGAGAGAGAGGCGGGA 59.740 55.000 0.00 0.00 0.00 5.14
744 776 2.358125 CGGTGGTCGGCAATGTCA 60.358 61.111 0.00 0.00 34.75 3.58
769 801 4.949121 AGGACCCTACTATCTGAACTTGT 58.051 43.478 0.00 0.00 0.00 3.16
770 802 4.712337 AGGACCCTACTATCTGAACTTGTG 59.288 45.833 0.00 0.00 0.00 3.33
771 803 4.434520 GACCCTACTATCTGAACTTGTGC 58.565 47.826 0.00 0.00 0.00 4.57
772 804 3.838317 ACCCTACTATCTGAACTTGTGCA 59.162 43.478 0.00 0.00 0.00 4.57
773 805 4.081420 ACCCTACTATCTGAACTTGTGCAG 60.081 45.833 2.38 2.38 0.00 4.41
774 806 4.081420 CCCTACTATCTGAACTTGTGCAGT 60.081 45.833 8.45 0.21 37.30 4.40
775 807 5.105752 CCTACTATCTGAACTTGTGCAGTC 58.894 45.833 8.45 0.00 32.94 3.51
785 984 5.009610 TGAACTTGTGCAGTCCTTTTTATCC 59.990 40.000 0.00 0.00 32.94 2.59
788 987 3.334691 TGTGCAGTCCTTTTTATCCGAG 58.665 45.455 0.00 0.00 0.00 4.63
802 1001 5.977489 TTATCCGAGTCTCAGAAACAGAA 57.023 39.130 0.00 0.00 0.00 3.02
806 1005 3.504134 CCGAGTCTCAGAAACAGAAGAGA 59.496 47.826 0.00 0.00 34.95 3.10
808 1007 5.153513 CGAGTCTCAGAAACAGAAGAGAAG 58.846 45.833 0.00 0.00 38.70 2.85
809 1008 5.467035 AGTCTCAGAAACAGAAGAGAAGG 57.533 43.478 0.00 0.00 38.70 3.46
810 1009 4.283212 AGTCTCAGAAACAGAAGAGAAGGG 59.717 45.833 0.00 0.00 38.70 3.95
811 1010 3.007398 TCTCAGAAACAGAAGAGAAGGGC 59.993 47.826 0.00 0.00 34.45 5.19
812 1011 2.039084 TCAGAAACAGAAGAGAAGGGCC 59.961 50.000 0.00 0.00 0.00 5.80
813 1012 1.002544 AGAAACAGAAGAGAAGGGCCG 59.997 52.381 0.00 0.00 0.00 6.13
814 1013 0.606673 AAACAGAAGAGAAGGGCCGC 60.607 55.000 0.00 0.00 0.00 6.53
815 1014 1.484444 AACAGAAGAGAAGGGCCGCT 61.484 55.000 0.00 0.00 0.00 5.52
816 1015 1.298014 CAGAAGAGAAGGGCCGCTT 59.702 57.895 6.21 6.21 0.00 4.68
817 1016 1.023513 CAGAAGAGAAGGGCCGCTTG 61.024 60.000 10.77 0.00 0.00 4.01
818 1017 2.360475 AAGAGAAGGGCCGCTTGC 60.360 61.111 10.77 3.96 40.16 4.01
868 1067 4.982701 GCTGGGCTTGCAGGTGGT 62.983 66.667 0.00 0.00 0.00 4.16
870 1069 4.601794 TGGGCTTGCAGGTGGTGG 62.602 66.667 0.00 0.00 0.00 4.61
913 1122 1.405105 CAAAGCGGAGAGAGAGAGAGG 59.595 57.143 0.00 0.00 0.00 3.69
914 1123 0.106719 AAGCGGAGAGAGAGAGAGGG 60.107 60.000 0.00 0.00 0.00 4.30
915 1124 0.986019 AGCGGAGAGAGAGAGAGGGA 60.986 60.000 0.00 0.00 0.00 4.20
916 1125 0.535102 GCGGAGAGAGAGAGAGGGAG 60.535 65.000 0.00 0.00 0.00 4.30
917 1126 0.108585 CGGAGAGAGAGAGAGGGAGG 59.891 65.000 0.00 0.00 0.00 4.30
919 1128 1.421646 GGAGAGAGAGAGAGGGAGGAG 59.578 61.905 0.00 0.00 0.00 3.69
920 1129 0.846693 AGAGAGAGAGAGGGAGGAGC 59.153 60.000 0.00 0.00 0.00 4.70
921 1130 0.178990 GAGAGAGAGAGGGAGGAGCC 60.179 65.000 0.00 0.00 0.00 4.70
1008 1250 1.731433 CCAAATCCATCCCGCTGCTG 61.731 60.000 0.00 0.00 0.00 4.41
1132 1374 2.609610 CGTCCCTTTCCTCCCCCA 60.610 66.667 0.00 0.00 0.00 4.96
1156 1791 2.860735 CGAATCCATTCCAGTCTCGTTC 59.139 50.000 0.00 0.00 33.28 3.95
1170 1805 1.515519 CGTTCTCGATTTCCGCCGA 60.516 57.895 0.00 0.00 39.71 5.54
1191 1826 2.281484 GTTTCTGCGGCAGGGACA 60.281 61.111 28.18 7.59 31.51 4.02
1203 1838 4.077184 GGGACACGTGGATGGCGA 62.077 66.667 21.57 0.00 0.00 5.54
1205 1840 2.261671 GACACGTGGATGGCGAGT 59.738 61.111 21.57 0.00 36.02 4.18
1247 1882 1.154150 GAACATGGCGCACTTGCTC 60.154 57.895 10.83 4.72 39.32 4.26
1259 1894 1.952296 CACTTGCTCAGGTTTTCAGCT 59.048 47.619 0.00 0.00 34.03 4.24
1263 1898 3.423539 TGCTCAGGTTTTCAGCTGTAT 57.576 42.857 14.67 0.00 46.88 2.29
1266 1901 3.869912 GCTCAGGTTTTCAGCTGTATGGA 60.870 47.826 14.67 3.15 46.88 3.41
1301 1954 4.080526 TCCTTCTACTGGTGATTTTAGGGC 60.081 45.833 0.00 0.00 0.00 5.19
1305 1958 5.985911 TCTACTGGTGATTTTAGGGCTTAC 58.014 41.667 0.00 0.00 0.00 2.34
1379 2032 3.139077 GTTGGTATCGATTGACCCATCC 58.861 50.000 13.60 2.65 34.58 3.51
1458 2111 3.770666 TCATCGAAGCAACTAGTAGTGC 58.229 45.455 10.95 10.95 0.00 4.40
1524 2363 8.345724 AGCTTGAGAAAATATGTCTTGTGAAT 57.654 30.769 0.00 0.00 0.00 2.57
1526 2365 9.495754 GCTTGAGAAAATATGTCTTGTGAATAC 57.504 33.333 0.00 0.00 0.00 1.89
1565 2404 4.012554 CGGATGATCAACCGGTCG 57.987 61.111 30.77 10.20 44.59 4.79
1672 2511 8.035165 TGAACTAATAAGCTTGATAAAACGCA 57.965 30.769 9.86 0.00 0.00 5.24
1724 2563 2.627699 CCCAACTATTTTGTGGTGTGCT 59.372 45.455 0.00 0.00 0.00 4.40
1776 2622 0.329261 TCTGGGAGAATGCTTGGTGG 59.671 55.000 0.00 0.00 0.00 4.61
1827 2673 0.179174 GGCGTGCAATTCGGGTTTAG 60.179 55.000 0.00 0.00 0.00 1.85
1844 2690 5.512576 GGGTTTAGCCTATCAATGATACGGT 60.513 44.000 15.26 12.18 37.43 4.83
2032 2878 0.397941 TGAAGACAAGCAGGTCAGGG 59.602 55.000 9.96 0.00 40.29 4.45
2092 2938 6.431234 GTGTGAGGAGAAGGTAATTGTCAAAT 59.569 38.462 0.00 0.00 32.83 2.32
2095 2941 8.669243 GTGAGGAGAAGGTAATTGTCAAATAAG 58.331 37.037 0.00 0.00 32.83 1.73
2127 2975 7.094377 TGTCCTTATAGATTGCACCTGTTTTTC 60.094 37.037 0.00 0.00 0.00 2.29
2454 3302 2.280445 TGTTATGCGCGTGTAATTCTCG 59.720 45.455 13.61 0.00 36.33 4.04
2491 3339 9.991906 AAAGTAGACACTATTGCTTTACTTGTA 57.008 29.630 5.72 0.00 33.48 2.41
2514 3362 8.673711 TGTATTTGATTTATCCCTTCTGTTTCG 58.326 33.333 0.00 0.00 0.00 3.46
2572 3423 8.318412 TGTATCTAGTTATGTTTGCTTTCAGGA 58.682 33.333 0.00 0.00 0.00 3.86
2717 3568 7.036996 TCTGTTGAAGACTCTATAGCATCAG 57.963 40.000 0.00 1.96 0.00 2.90
3108 3959 4.865905 TGCAGGTTGGTTCCATACATAAT 58.134 39.130 0.00 0.00 0.00 1.28
3109 3960 5.268387 TGCAGGTTGGTTCCATACATAATT 58.732 37.500 0.00 0.00 0.00 1.40
3194 4047 6.499234 TCATACTTGTGATGGTGAACATTG 57.501 37.500 0.00 0.00 40.72 2.82
3249 4102 3.588955 TCATTCATGACCAGACACTTCG 58.411 45.455 0.00 0.00 0.00 3.79
3339 4192 6.127310 GGTAACTGGATTGTCTGATACAGAGT 60.127 42.308 4.21 0.00 41.46 3.24
3340 4193 7.068348 GGTAACTGGATTGTCTGATACAGAGTA 59.932 40.741 4.21 0.00 41.46 2.59
3342 4195 7.048629 ACTGGATTGTCTGATACAGAGTATG 57.951 40.000 4.21 0.00 41.46 2.39
3343 4196 6.041409 ACTGGATTGTCTGATACAGAGTATGG 59.959 42.308 4.21 0.00 41.46 2.74
3344 4197 5.221521 TGGATTGTCTGATACAGAGTATGGC 60.222 44.000 1.53 0.00 41.46 4.40
3345 4198 5.011533 GGATTGTCTGATACAGAGTATGGCT 59.988 44.000 1.53 0.00 41.46 4.75
3346 4199 4.926140 TGTCTGATACAGAGTATGGCTG 57.074 45.455 1.53 0.00 41.46 4.85
3384 4240 9.994432 GTGATTCACTTACAAAATCTAAGATGG 57.006 33.333 9.59 0.00 31.99 3.51
3411 4267 4.816385 TGCCTATGTAAAGCTATTCACTGC 59.184 41.667 0.00 0.00 0.00 4.40
3532 4397 5.726980 TTTTCCTGTTAAGCTTCATGCAT 57.273 34.783 0.00 0.00 45.94 3.96
3647 4782 1.152525 ACGTGGGTGGACTCAGAGT 60.153 57.895 1.46 1.46 0.00 3.24
3648 4783 1.179814 ACGTGGGTGGACTCAGAGTC 61.180 60.000 20.95 20.95 44.32 3.36
3649 4784 0.896019 CGTGGGTGGACTCAGAGTCT 60.896 60.000 26.51 0.00 44.46 3.24
3650 4785 0.892063 GTGGGTGGACTCAGAGTCTC 59.108 60.000 26.51 19.52 44.46 3.36
3651 4786 0.482887 TGGGTGGACTCAGAGTCTCA 59.517 55.000 26.51 20.02 44.46 3.27
3652 4787 1.181786 GGGTGGACTCAGAGTCTCAG 58.818 60.000 26.51 0.00 44.46 3.35
3653 4788 1.272203 GGGTGGACTCAGAGTCTCAGA 60.272 57.143 26.51 8.79 44.46 3.27
3654 4789 2.091541 GGTGGACTCAGAGTCTCAGAG 58.908 57.143 26.51 18.10 44.46 3.35
3655 4790 2.290641 GGTGGACTCAGAGTCTCAGAGA 60.291 54.545 26.51 8.88 44.46 3.10
3691 4826 2.498481 CCTATACGTGGACACAAAGGGA 59.502 50.000 0.00 0.00 0.00 4.20
3774 4910 5.056480 CCGATACCATGTTAAGCTTCATGA 58.944 41.667 23.09 9.75 42.52 3.07
3784 4920 5.945784 TGTTAAGCTTCATGAACTAGCCAAT 59.054 36.000 13.12 4.53 35.53 3.16
3788 4924 3.067742 GCTTCATGAACTAGCCAATGCAT 59.932 43.478 3.38 0.00 41.13 3.96
3794 4930 3.831333 TGAACTAGCCAATGCATCCAAAA 59.169 39.130 0.00 0.00 41.13 2.44
3797 4933 3.445096 ACTAGCCAATGCATCCAAAAGTC 59.555 43.478 0.00 0.00 41.13 3.01
3805 4941 3.334691 TGCATCCAAAAGTCCGAACTAG 58.665 45.455 0.00 0.00 33.48 2.57
3835 4971 5.012148 AGGGCTAGACAATCCACATATACAC 59.988 44.000 0.00 0.00 0.00 2.90
3836 4972 5.012148 GGGCTAGACAATCCACATATACACT 59.988 44.000 0.00 0.00 0.00 3.55
3851 4987 0.765510 ACACTTCAACACCCCCTCTC 59.234 55.000 0.00 0.00 0.00 3.20
3870 5006 2.544359 CGTGTGCGTGGAAAGTCG 59.456 61.111 0.00 0.00 0.00 4.18
3890 5026 3.814577 CACGTGGGTGGACTTAGAG 57.185 57.895 7.95 0.00 40.58 2.43
3891 5027 1.254026 CACGTGGGTGGACTTAGAGA 58.746 55.000 7.95 0.00 40.58 3.10
3920 5056 2.154567 AGAGGCCTATACGTGGACAA 57.845 50.000 4.42 0.00 34.31 3.18
3926 5062 2.681344 GCCTATACGTGGACAAAAAGGG 59.319 50.000 0.00 0.00 0.00 3.95
3946 5082 2.301583 GGGGGCAGCAACAATTTTTAGA 59.698 45.455 0.00 0.00 0.00 2.10
4006 5142 3.877508 GCTCCGATACCATGTTAAGCTTT 59.122 43.478 3.20 0.00 0.00 3.51
4100 5237 4.103785 ACTTCCAATCCCCAGTATGATGAG 59.896 45.833 0.00 0.00 39.69 2.90
4147 5287 7.666623 TCAATTGTCACTACTGTAGTCATGAA 58.333 34.615 17.22 8.62 36.76 2.57
4174 5316 8.313944 ACATGTAGGTGTACTGTTCCATAATA 57.686 34.615 0.00 0.00 0.00 0.98
4215 5357 6.764877 TCTTCTGAACTGTCGTTTGTTATC 57.235 37.500 0.00 0.00 32.39 1.75
4217 5359 3.427528 TCTGAACTGTCGTTTGTTATCGC 59.572 43.478 0.00 0.00 32.39 4.58
4399 5542 0.234884 CACTCTTTTTGGACCGTCGC 59.765 55.000 0.00 0.00 0.00 5.19
4520 5663 8.848474 TGAGTCAATTTCTAAGAGGTAAAAGG 57.152 34.615 0.00 0.00 0.00 3.11
4614 5758 5.499004 AATGCTGGAGTACTTAAACTGGA 57.501 39.130 0.00 0.00 0.00 3.86
4643 5787 8.310406 TGAATAAATAAGTGTCACACTCACTG 57.690 34.615 11.89 0.00 44.62 3.66
4649 5793 1.949525 GTGTCACACTCACTGGCAATT 59.050 47.619 0.00 0.00 33.59 2.32
4712 5939 6.673106 TCGTTTGCTCAATTTGTGCTAATTA 58.327 32.000 20.43 10.88 37.71 1.40
4741 5968 2.417651 CCATGGCATGTAAAGGCAGTTG 60.418 50.000 24.80 2.40 45.09 3.16
4792 6023 9.906660 TGGTATTTATTGTGTTAAAGAAGCTTG 57.093 29.630 2.10 0.00 0.00 4.01
4810 6041 2.415608 GCTCGAGTCGGTCCCATGA 61.416 63.158 15.13 0.00 0.00 3.07
4855 6086 5.934625 GCCTCTCTGAAGTCAGTTTCATAAA 59.065 40.000 8.14 0.00 44.12 1.40
4975 6206 6.294397 CCTTCAGTTGCTCAAAAATAGCTTCT 60.294 38.462 0.00 0.00 40.73 2.85
5378 6622 3.783362 TTGTTGGGTGCAGGTCCGG 62.783 63.158 0.00 0.00 0.00 5.14
5564 6817 3.340034 TGTAGGCTCATTTTTGGGTACG 58.660 45.455 0.00 0.00 0.00 3.67
5604 6858 6.665680 AGTAGTATTCTCAGCCCATGTATAGG 59.334 42.308 0.00 0.00 0.00 2.57
5668 6922 4.986659 ACTTGATGAACTTTTTGCAGCATC 59.013 37.500 0.00 0.00 34.32 3.91
5715 7286 7.553881 TGTAGATTTGCTTGTCTAATTAGCC 57.446 36.000 7.67 0.00 34.03 3.93
5716 7287 7.338710 TGTAGATTTGCTTGTCTAATTAGCCT 58.661 34.615 7.67 0.00 34.03 4.58
5717 7288 8.482943 TGTAGATTTGCTTGTCTAATTAGCCTA 58.517 33.333 7.67 0.00 34.03 3.93
5718 7289 9.326413 GTAGATTTGCTTGTCTAATTAGCCTAA 57.674 33.333 7.67 2.39 34.03 2.69
5719 7290 8.986929 AGATTTGCTTGTCTAATTAGCCTAAT 57.013 30.769 7.67 0.00 34.03 1.73
5720 7291 9.413734 AGATTTGCTTGTCTAATTAGCCTAATT 57.586 29.630 13.84 13.84 41.06 1.40
5723 7294 9.638239 TTTGCTTGTCTAATTAGCCTAATTTTG 57.362 29.630 14.52 8.74 39.06 2.44
5724 7295 8.348285 TGCTTGTCTAATTAGCCTAATTTTGT 57.652 30.769 14.52 0.00 39.06 2.83
5725 7296 9.456147 TGCTTGTCTAATTAGCCTAATTTTGTA 57.544 29.630 14.52 0.00 39.06 2.41
5726 7297 9.717892 GCTTGTCTAATTAGCCTAATTTTGTAC 57.282 33.333 14.52 8.75 39.06 2.90
5729 7300 9.609346 TGTCTAATTAGCCTAATTTTGTACTCC 57.391 33.333 14.52 0.00 39.06 3.85
5730 7301 9.053840 GTCTAATTAGCCTAATTTTGTACTCCC 57.946 37.037 14.52 0.00 39.06 4.30
5731 7302 8.999895 TCTAATTAGCCTAATTTTGTACTCCCT 58.000 33.333 14.52 0.00 39.06 4.20
5732 7303 9.274206 CTAATTAGCCTAATTTTGTACTCCCTC 57.726 37.037 14.52 0.00 39.06 4.30
5733 7304 4.505324 AGCCTAATTTTGTACTCCCTCC 57.495 45.455 0.00 0.00 0.00 4.30
5734 7305 3.118371 AGCCTAATTTTGTACTCCCTCCG 60.118 47.826 0.00 0.00 0.00 4.63
5735 7306 3.370209 GCCTAATTTTGTACTCCCTCCGT 60.370 47.826 0.00 0.00 0.00 4.69
5736 7307 4.840271 CCTAATTTTGTACTCCCTCCGTT 58.160 43.478 0.00 0.00 0.00 4.44
5737 7308 4.874396 CCTAATTTTGTACTCCCTCCGTTC 59.126 45.833 0.00 0.00 0.00 3.95
5738 7309 2.845363 TTTTGTACTCCCTCCGTTCC 57.155 50.000 0.00 0.00 0.00 3.62
5739 7310 1.719529 TTTGTACTCCCTCCGTTCCA 58.280 50.000 0.00 0.00 0.00 3.53
5740 7311 1.719529 TTGTACTCCCTCCGTTCCAA 58.280 50.000 0.00 0.00 0.00 3.53
5741 7312 1.719529 TGTACTCCCTCCGTTCCAAA 58.280 50.000 0.00 0.00 0.00 3.28
5742 7313 2.262637 TGTACTCCCTCCGTTCCAAAT 58.737 47.619 0.00 0.00 0.00 2.32
5743 7314 2.640826 TGTACTCCCTCCGTTCCAAATT 59.359 45.455 0.00 0.00 0.00 1.82
5744 7315 3.839490 TGTACTCCCTCCGTTCCAAATTA 59.161 43.478 0.00 0.00 0.00 1.40
5745 7316 3.345508 ACTCCCTCCGTTCCAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
5746 7317 2.910977 ACTCCCTCCGTTCCAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
5747 7318 3.329814 ACTCCCTCCGTTCCAAATTACTT 59.670 43.478 0.00 0.00 0.00 2.24
5748 7319 3.681593 TCCCTCCGTTCCAAATTACTTG 58.318 45.455 0.00 0.00 34.52 3.16
5749 7320 3.073356 TCCCTCCGTTCCAAATTACTTGT 59.927 43.478 0.00 0.00 32.65 3.16
5750 7321 3.439129 CCCTCCGTTCCAAATTACTTGTC 59.561 47.826 0.00 0.00 32.65 3.18
5751 7322 3.124636 CCTCCGTTCCAAATTACTTGTCG 59.875 47.826 0.00 0.00 32.65 4.35
5752 7323 2.481185 TCCGTTCCAAATTACTTGTCGC 59.519 45.455 0.00 0.00 32.65 5.19
5753 7324 2.482721 CCGTTCCAAATTACTTGTCGCT 59.517 45.455 0.00 0.00 32.65 4.93
5754 7325 3.479006 CGTTCCAAATTACTTGTCGCTG 58.521 45.455 0.00 0.00 32.65 5.18
5755 7326 3.185594 CGTTCCAAATTACTTGTCGCTGA 59.814 43.478 0.00 0.00 32.65 4.26
5756 7327 4.319190 CGTTCCAAATTACTTGTCGCTGAA 60.319 41.667 0.00 0.00 32.65 3.02
5757 7328 5.516090 GTTCCAAATTACTTGTCGCTGAAA 58.484 37.500 0.00 0.00 32.65 2.69
5758 7329 5.957842 TCCAAATTACTTGTCGCTGAAAT 57.042 34.783 0.00 0.00 32.65 2.17
5759 7330 5.698832 TCCAAATTACTTGTCGCTGAAATG 58.301 37.500 0.00 0.00 32.65 2.32
5760 7331 4.858692 CCAAATTACTTGTCGCTGAAATGG 59.141 41.667 0.00 0.00 32.65 3.16
5761 7332 5.335583 CCAAATTACTTGTCGCTGAAATGGA 60.336 40.000 0.00 0.00 32.65 3.41
5762 7333 6.324819 CAAATTACTTGTCGCTGAAATGGAT 58.675 36.000 0.00 0.00 0.00 3.41
5763 7334 4.944962 TTACTTGTCGCTGAAATGGATG 57.055 40.909 0.00 0.00 0.00 3.51
5764 7335 2.783135 ACTTGTCGCTGAAATGGATGT 58.217 42.857 0.00 0.00 0.00 3.06
5765 7336 3.937814 ACTTGTCGCTGAAATGGATGTA 58.062 40.909 0.00 0.00 0.00 2.29
5766 7337 4.517285 ACTTGTCGCTGAAATGGATGTAT 58.483 39.130 0.00 0.00 0.00 2.29
5767 7338 4.572389 ACTTGTCGCTGAAATGGATGTATC 59.428 41.667 0.00 0.00 0.00 2.24
5768 7339 4.406648 TGTCGCTGAAATGGATGTATCT 57.593 40.909 0.00 0.00 0.00 1.98
5769 7340 5.529581 TGTCGCTGAAATGGATGTATCTA 57.470 39.130 0.00 0.00 0.00 1.98
5770 7341 5.532557 TGTCGCTGAAATGGATGTATCTAG 58.467 41.667 0.00 0.00 0.00 2.43
5771 7342 5.301805 TGTCGCTGAAATGGATGTATCTAGA 59.698 40.000 0.00 0.00 0.00 2.43
5772 7343 6.183360 TGTCGCTGAAATGGATGTATCTAGAA 60.183 38.462 0.00 0.00 0.00 2.10
5773 7344 6.144724 GTCGCTGAAATGGATGTATCTAGAAC 59.855 42.308 0.00 0.00 0.00 3.01
5774 7345 6.040955 TCGCTGAAATGGATGTATCTAGAACT 59.959 38.462 0.00 0.00 0.00 3.01
5775 7346 7.230712 TCGCTGAAATGGATGTATCTAGAACTA 59.769 37.037 0.00 0.00 0.00 2.24
5776 7347 7.867909 CGCTGAAATGGATGTATCTAGAACTAA 59.132 37.037 0.00 0.00 0.00 2.24
5777 7348 9.547753 GCTGAAATGGATGTATCTAGAACTAAA 57.452 33.333 0.00 0.00 0.00 1.85
5803 7374 5.955488 ACATCTAGATACATCCATACGTGC 58.045 41.667 4.54 0.00 0.00 5.34
5804 7375 4.680171 TCTAGATACATCCATACGTGCG 57.320 45.455 0.00 0.00 0.00 5.34
5805 7376 4.320870 TCTAGATACATCCATACGTGCGA 58.679 43.478 0.00 0.00 0.00 5.10
5806 7377 3.284323 AGATACATCCATACGTGCGAC 57.716 47.619 0.00 0.00 0.00 5.19
5807 7378 2.621526 AGATACATCCATACGTGCGACA 59.378 45.455 0.00 0.00 0.00 4.35
5808 7379 2.943449 TACATCCATACGTGCGACAA 57.057 45.000 0.00 0.00 0.00 3.18
5809 7380 1.640428 ACATCCATACGTGCGACAAG 58.360 50.000 0.00 0.00 0.00 3.16
5810 7381 1.067142 ACATCCATACGTGCGACAAGT 60.067 47.619 0.00 0.00 0.00 3.16
5811 7382 2.164827 ACATCCATACGTGCGACAAGTA 59.835 45.455 0.00 7.72 33.49 2.24
5812 7383 3.183754 CATCCATACGTGCGACAAGTAA 58.816 45.455 0.00 0.00 32.82 2.24
5813 7384 3.513680 TCCATACGTGCGACAAGTAAT 57.486 42.857 0.00 0.00 32.82 1.89
5814 7385 3.852286 TCCATACGTGCGACAAGTAATT 58.148 40.909 0.00 0.00 32.82 1.40
5815 7386 3.861113 TCCATACGTGCGACAAGTAATTC 59.139 43.478 0.00 0.00 32.82 2.17
5816 7387 3.301579 CCATACGTGCGACAAGTAATTCG 60.302 47.826 0.00 0.00 32.82 3.34
5817 7388 1.065358 ACGTGCGACAAGTAATTCGG 58.935 50.000 0.00 0.00 35.73 4.30
5818 7389 1.336148 ACGTGCGACAAGTAATTCGGA 60.336 47.619 0.00 0.00 35.73 4.55
5819 7390 1.722464 CGTGCGACAAGTAATTCGGAA 59.278 47.619 0.00 0.00 37.32 4.30
5820 7391 2.471749 CGTGCGACAAGTAATTCGGAAC 60.472 50.000 0.00 0.00 37.32 3.62
5847 7418 6.990908 GGGAGTACCTTCTAATTAGCCTAA 57.009 41.667 7.67 0.00 35.85 2.69
5861 7434 9.391006 CTAATTAGCCTAATTTTGTACTGTGGA 57.609 33.333 14.52 0.00 39.06 4.02
5862 7435 8.644374 AATTAGCCTAATTTTGTACTGTGGAA 57.356 30.769 3.83 0.00 34.91 3.53
5863 7436 5.959618 AGCCTAATTTTGTACTGTGGAAC 57.040 39.130 0.00 0.00 37.35 3.62
5864 7437 5.631119 AGCCTAATTTTGTACTGTGGAACT 58.369 37.500 0.00 0.00 38.04 3.01
5865 7438 5.705905 AGCCTAATTTTGTACTGTGGAACTC 59.294 40.000 0.00 0.00 38.04 3.01
5866 7439 5.106277 GCCTAATTTTGTACTGTGGAACTCC 60.106 44.000 0.00 0.00 38.04 3.85
5867 7440 6.001460 CCTAATTTTGTACTGTGGAACTCCA 58.999 40.000 0.00 0.00 45.30 3.86
5892 7465 3.286751 GTGGCTGTCGGCTTGCAA 61.287 61.111 3.10 0.00 41.46 4.08
5931 7507 3.119495 GGGAAAATGGGAATCAAGTGACG 60.119 47.826 0.00 0.00 0.00 4.35
5956 7540 3.391296 TCTGATACCCCCTTGCATTCTAC 59.609 47.826 0.00 0.00 0.00 2.59
5957 7541 3.392616 CTGATACCCCCTTGCATTCTACT 59.607 47.826 0.00 0.00 0.00 2.57
5958 7542 3.785887 TGATACCCCCTTGCATTCTACTT 59.214 43.478 0.00 0.00 0.00 2.24
5984 7576 1.890979 GGATGCTCATCGGGCACAG 60.891 63.158 0.00 0.00 42.69 3.66
5986 7578 2.937379 GATGCTCATCGGGCACAGCT 62.937 60.000 0.00 0.00 42.69 4.24
6062 7665 2.748605 GAGTTGCTCCATGAGGTATCG 58.251 52.381 0.00 0.00 35.89 2.92
6183 7787 2.114670 GTGCACATGGGATCCGGTG 61.115 63.158 19.80 19.80 35.48 4.94
6184 7788 2.516930 GCACATGGGATCCGGTGG 60.517 66.667 23.25 12.52 33.80 4.61
6185 7789 2.192979 CACATGGGATCCGGTGGG 59.807 66.667 17.51 11.24 30.97 4.61
6186 7790 3.809013 ACATGGGATCCGGTGGGC 61.809 66.667 16.59 0.00 0.00 5.36
6237 7842 4.834453 CCCTCCTGCTGCTCGCTG 62.834 72.222 0.00 0.21 40.11 5.18
6257 7862 0.384725 GCTACGCGCTGCATTATTGG 60.385 55.000 17.16 0.00 35.14 3.16
6334 7939 0.812549 TATCCTGCGTTGCGTGTAGA 59.187 50.000 0.00 0.00 0.00 2.59
6344 7949 3.121463 CGTTGCGTGTAGACAGTTTGTAG 60.121 47.826 0.00 0.00 0.00 2.74
6345 7950 3.720949 TGCGTGTAGACAGTTTGTAGT 57.279 42.857 0.00 0.00 0.00 2.73
6346 7951 3.377439 TGCGTGTAGACAGTTTGTAGTG 58.623 45.455 0.00 0.00 0.00 2.74
6377 7982 6.293027 GGCATTTTCTTCACTTCCAAATTGTG 60.293 38.462 0.00 0.00 0.00 3.33
6463 8071 0.392595 GGACTCCATTTCGGTCACCC 60.393 60.000 0.00 0.00 35.57 4.61
6476 8084 1.536331 GGTCACCCGCGACAAAATAAA 59.464 47.619 8.23 0.00 37.66 1.40
6478 8086 2.224784 GTCACCCGCGACAAAATAAACT 59.775 45.455 8.23 0.00 35.88 2.66
6480 8088 1.461897 ACCCGCGACAAAATAAACTCG 59.538 47.619 8.23 0.00 0.00 4.18
6526 8134 1.597663 CGTGGATGGAAATTCGGTAGC 59.402 52.381 0.00 0.00 0.00 3.58
6527 8135 1.597663 GTGGATGGAAATTCGGTAGCG 59.402 52.381 8.29 8.29 0.00 4.26
6528 8136 1.483004 TGGATGGAAATTCGGTAGCGA 59.517 47.619 13.94 13.94 0.00 4.93
6529 8137 2.135933 GGATGGAAATTCGGTAGCGAG 58.864 52.381 17.37 0.00 0.00 5.03
6530 8138 2.223971 GGATGGAAATTCGGTAGCGAGA 60.224 50.000 17.37 9.13 0.00 4.04
6531 8139 2.288961 TGGAAATTCGGTAGCGAGAC 57.711 50.000 17.37 9.73 0.00 3.36
6532 8140 1.822990 TGGAAATTCGGTAGCGAGACT 59.177 47.619 17.37 5.52 0.00 3.24
6533 8141 2.194271 GGAAATTCGGTAGCGAGACTG 58.806 52.381 17.37 0.00 0.00 3.51
6534 8142 1.588861 GAAATTCGGTAGCGAGACTGC 59.411 52.381 17.37 4.09 0.00 4.40
6547 8155 1.668751 GAGACTGCGAGAGTGACTAGG 59.331 57.143 0.00 0.00 33.83 3.02
6552 8160 3.129638 ACTGCGAGAGTGACTAGGAATTC 59.870 47.826 0.00 0.00 31.75 2.17
6553 8161 2.427453 TGCGAGAGTGACTAGGAATTCC 59.573 50.000 17.31 17.31 0.00 3.01
6557 8165 4.339530 CGAGAGTGACTAGGAATTCCATCA 59.660 45.833 26.22 21.28 38.89 3.07
6581 8189 2.482664 CGTCCATTCTCTCATCTGGGTG 60.483 54.545 0.00 0.00 0.00 4.61
6582 8190 1.487976 TCCATTCTCTCATCTGGGTGC 59.512 52.381 0.00 0.00 0.00 5.01
6583 8191 1.489649 CCATTCTCTCATCTGGGTGCT 59.510 52.381 0.00 0.00 0.00 4.40
6584 8192 2.702478 CCATTCTCTCATCTGGGTGCTA 59.298 50.000 0.00 0.00 0.00 3.49
6585 8193 3.244146 CCATTCTCTCATCTGGGTGCTAG 60.244 52.174 0.00 0.00 0.00 3.42
6586 8194 3.388552 TTCTCTCATCTGGGTGCTAGA 57.611 47.619 0.00 0.00 0.00 2.43
6587 8195 3.609256 TCTCTCATCTGGGTGCTAGAT 57.391 47.619 0.00 0.00 35.34 1.98
6588 8196 3.495331 TCTCTCATCTGGGTGCTAGATC 58.505 50.000 0.00 0.00 32.75 2.75
6589 8197 2.562298 CTCTCATCTGGGTGCTAGATCC 59.438 54.545 0.00 0.00 32.75 3.36
6590 8198 1.622811 CTCATCTGGGTGCTAGATCCC 59.377 57.143 13.63 13.63 43.67 3.85
6591 8199 1.221523 TCATCTGGGTGCTAGATCCCT 59.778 52.381 18.98 1.99 43.74 4.20
6592 8200 1.622811 CATCTGGGTGCTAGATCCCTC 59.377 57.143 18.98 0.51 43.74 4.30
6593 8201 0.937441 TCTGGGTGCTAGATCCCTCT 59.063 55.000 18.98 0.00 43.74 3.69
6594 8202 1.047002 CTGGGTGCTAGATCCCTCTG 58.953 60.000 18.98 9.10 43.74 3.35
6595 8203 0.399091 TGGGTGCTAGATCCCTCTGG 60.399 60.000 18.98 0.00 43.74 3.86
6601 8209 1.631405 CTAGATCCCTCTGGCTCTGG 58.369 60.000 0.00 0.00 37.66 3.86
6602 8210 0.189574 TAGATCCCTCTGGCTCTGGG 59.810 60.000 0.00 0.00 37.66 4.45
6603 8211 2.040043 ATCCCTCTGGCTCTGGGG 60.040 66.667 8.84 0.00 41.22 4.96
6604 8212 3.284251 TCCCTCTGGCTCTGGGGA 61.284 66.667 8.84 0.00 44.76 4.81
6605 8213 2.285668 CCCTCTGGCTCTGGGGAA 60.286 66.667 0.00 0.00 41.25 3.97
6606 8214 2.373707 CCCTCTGGCTCTGGGGAAG 61.374 68.421 0.00 0.00 41.25 3.46
6607 8215 2.588989 CTCTGGCTCTGGGGAAGC 59.411 66.667 0.00 0.00 0.00 3.86
6608 8216 1.994507 CTCTGGCTCTGGGGAAGCT 60.995 63.158 0.00 0.00 0.00 3.74
6609 8217 0.689080 CTCTGGCTCTGGGGAAGCTA 60.689 60.000 0.00 0.00 0.00 3.32
6610 8218 0.030705 TCTGGCTCTGGGGAAGCTAT 60.031 55.000 0.00 0.00 0.00 2.97
6611 8219 0.842635 CTGGCTCTGGGGAAGCTATT 59.157 55.000 0.00 0.00 0.00 1.73
6612 8220 1.213926 CTGGCTCTGGGGAAGCTATTT 59.786 52.381 0.00 0.00 0.00 1.40
6613 8221 1.640670 TGGCTCTGGGGAAGCTATTTT 59.359 47.619 0.00 0.00 0.00 1.82
6614 8222 2.302260 GGCTCTGGGGAAGCTATTTTC 58.698 52.381 0.00 0.00 0.00 2.29
6615 8223 2.302260 GCTCTGGGGAAGCTATTTTCC 58.698 52.381 0.00 0.00 44.82 3.13
6616 8224 2.092158 GCTCTGGGGAAGCTATTTTCCT 60.092 50.000 2.26 0.00 44.90 3.36
6617 8225 3.814625 CTCTGGGGAAGCTATTTTCCTC 58.185 50.000 2.26 0.00 46.13 3.71
6618 8226 2.509964 TCTGGGGAAGCTATTTTCCTCC 59.490 50.000 0.00 2.00 45.48 4.30
6619 8227 1.569072 TGGGGAAGCTATTTTCCTCCC 59.431 52.381 8.66 8.66 45.48 4.30
6620 8228 1.853622 GGGGAAGCTATTTTCCTCCCT 59.146 52.381 15.42 0.00 44.90 4.20
6621 8229 2.158593 GGGGAAGCTATTTTCCTCCCTC 60.159 54.545 15.42 4.31 44.90 4.30
6622 8230 2.485657 GGGAAGCTATTTTCCTCCCTCG 60.486 54.545 9.74 0.00 44.90 4.63
6623 8231 2.170817 GGAAGCTATTTTCCTCCCTCGT 59.829 50.000 0.00 0.00 42.73 4.18
6624 8232 3.370633 GGAAGCTATTTTCCTCCCTCGTT 60.371 47.826 0.00 0.00 42.73 3.85
6625 8233 3.268023 AGCTATTTTCCTCCCTCGTTG 57.732 47.619 0.00 0.00 0.00 4.10
6626 8234 2.092914 AGCTATTTTCCTCCCTCGTTGG 60.093 50.000 0.00 0.00 0.00 3.77
6636 8244 3.614399 CCTCGTTGGGCATAGGATC 57.386 57.895 0.00 0.00 0.00 3.36
6637 8245 1.051812 CCTCGTTGGGCATAGGATCT 58.948 55.000 0.00 0.00 0.00 2.75
6638 8246 1.001406 CCTCGTTGGGCATAGGATCTC 59.999 57.143 0.00 0.00 0.00 2.75
6639 8247 1.967066 CTCGTTGGGCATAGGATCTCT 59.033 52.381 0.00 0.00 0.00 3.10
6640 8248 2.366916 CTCGTTGGGCATAGGATCTCTT 59.633 50.000 0.00 0.00 0.00 2.85
6641 8249 2.771943 TCGTTGGGCATAGGATCTCTTT 59.228 45.455 0.00 0.00 0.00 2.52
6642 8250 2.874701 CGTTGGGCATAGGATCTCTTTG 59.125 50.000 0.00 0.00 0.00 2.77
6643 8251 3.682718 CGTTGGGCATAGGATCTCTTTGT 60.683 47.826 0.00 0.00 0.00 2.83
6644 8252 4.273318 GTTGGGCATAGGATCTCTTTGTT 58.727 43.478 0.00 0.00 0.00 2.83
6645 8253 4.591321 TGGGCATAGGATCTCTTTGTTT 57.409 40.909 0.00 0.00 0.00 2.83
6646 8254 4.934356 TGGGCATAGGATCTCTTTGTTTT 58.066 39.130 0.00 0.00 0.00 2.43
6647 8255 4.949856 TGGGCATAGGATCTCTTTGTTTTC 59.050 41.667 0.00 0.00 0.00 2.29
6648 8256 4.339530 GGGCATAGGATCTCTTTGTTTTCC 59.660 45.833 0.00 0.00 0.00 3.13
6649 8257 4.035675 GGCATAGGATCTCTTTGTTTTCCG 59.964 45.833 0.00 0.00 0.00 4.30
6650 8258 4.876107 GCATAGGATCTCTTTGTTTTCCGA 59.124 41.667 0.00 0.00 0.00 4.55
6651 8259 5.007136 GCATAGGATCTCTTTGTTTTCCGAG 59.993 44.000 0.00 0.00 0.00 4.63
6652 8260 3.944087 AGGATCTCTTTGTTTTCCGAGG 58.056 45.455 0.00 0.00 0.00 4.63
6653 8261 3.328050 AGGATCTCTTTGTTTTCCGAGGT 59.672 43.478 0.00 0.00 0.00 3.85
6654 8262 4.530946 AGGATCTCTTTGTTTTCCGAGGTA 59.469 41.667 0.00 0.00 0.00 3.08
6655 8263 4.630505 GGATCTCTTTGTTTTCCGAGGTAC 59.369 45.833 0.00 0.00 0.00 3.34
6656 8264 3.999046 TCTCTTTGTTTTCCGAGGTACC 58.001 45.455 2.73 2.73 0.00 3.34
6657 8265 3.388676 TCTCTTTGTTTTCCGAGGTACCA 59.611 43.478 15.94 0.00 0.00 3.25
6658 8266 3.469739 TCTTTGTTTTCCGAGGTACCAC 58.530 45.455 15.94 7.03 0.00 4.16
6659 8267 3.135167 TCTTTGTTTTCCGAGGTACCACT 59.865 43.478 15.94 0.00 0.00 4.00
6660 8268 3.564053 TTGTTTTCCGAGGTACCACTT 57.436 42.857 15.94 0.00 0.00 3.16
6661 8269 3.564053 TGTTTTCCGAGGTACCACTTT 57.436 42.857 15.94 0.00 0.00 2.66
6662 8270 3.888583 TGTTTTCCGAGGTACCACTTTT 58.111 40.909 15.94 0.00 0.00 2.27
6663 8271 5.033589 TGTTTTCCGAGGTACCACTTTTA 57.966 39.130 15.94 0.00 0.00 1.52
6664 8272 5.435291 TGTTTTCCGAGGTACCACTTTTAA 58.565 37.500 15.94 0.00 0.00 1.52
6665 8273 5.528320 TGTTTTCCGAGGTACCACTTTTAAG 59.472 40.000 15.94 0.00 0.00 1.85
6666 8274 3.967332 TCCGAGGTACCACTTTTAAGG 57.033 47.619 15.94 3.51 0.00 2.69
6667 8275 3.242011 TCCGAGGTACCACTTTTAAGGT 58.758 45.455 15.94 0.00 41.89 3.50
6668 8276 3.259123 TCCGAGGTACCACTTTTAAGGTC 59.741 47.826 15.94 0.00 39.31 3.85
6669 8277 3.260128 CCGAGGTACCACTTTTAAGGTCT 59.740 47.826 15.94 0.00 39.31 3.85
6670 8278 4.492611 CGAGGTACCACTTTTAAGGTCTC 58.507 47.826 15.94 0.00 39.31 3.36
6671 8279 4.220163 CGAGGTACCACTTTTAAGGTCTCT 59.780 45.833 15.94 0.00 39.31 3.10
6672 8280 5.279356 CGAGGTACCACTTTTAAGGTCTCTT 60.279 44.000 15.94 0.00 39.31 2.85
6673 8281 6.111669 AGGTACCACTTTTAAGGTCTCTTC 57.888 41.667 15.94 0.00 39.31 2.87
6674 8282 5.012871 AGGTACCACTTTTAAGGTCTCTTCC 59.987 44.000 15.94 0.00 39.31 3.46
6675 8283 5.221783 GGTACCACTTTTAAGGTCTCTTCCA 60.222 44.000 7.15 0.00 39.31 3.53
6676 8284 5.382664 ACCACTTTTAAGGTCTCTTCCAA 57.617 39.130 0.00 0.00 30.79 3.53
6677 8285 5.953571 ACCACTTTTAAGGTCTCTTCCAAT 58.046 37.500 0.00 0.00 30.79 3.16
6678 8286 5.770162 ACCACTTTTAAGGTCTCTTCCAATG 59.230 40.000 0.00 0.00 30.79 2.82
6679 8287 5.335976 CCACTTTTAAGGTCTCTTCCAATGC 60.336 44.000 0.00 0.00 34.59 3.56
6680 8288 5.241506 CACTTTTAAGGTCTCTTCCAATGCA 59.758 40.000 0.00 0.00 34.59 3.96
6681 8289 6.012745 ACTTTTAAGGTCTCTTCCAATGCAT 58.987 36.000 0.00 0.00 34.59 3.96
6682 8290 7.121168 CACTTTTAAGGTCTCTTCCAATGCATA 59.879 37.037 0.00 0.00 34.59 3.14
6683 8291 7.337942 ACTTTTAAGGTCTCTTCCAATGCATAG 59.662 37.037 0.00 0.00 34.59 2.23
6684 8292 3.853355 AGGTCTCTTCCAATGCATAGG 57.147 47.619 0.00 0.00 0.00 2.57
6685 8293 3.118531 AGGTCTCTTCCAATGCATAGGT 58.881 45.455 0.00 0.00 0.00 3.08
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 6.096987 GTGAGTATGAGTATGTGAAGAGGGAA 59.903 42.308 0.00 0.00 0.00 3.97
59 60 2.034066 CGGGTGATGGCCAACAGT 59.966 61.111 17.13 0.00 32.95 3.55
65 66 1.153429 GTAGTGTCGGGTGATGGCC 60.153 63.158 0.00 0.00 0.00 5.36
112 113 7.441458 ACCGCCACTTTACTATATGATTTTCTC 59.559 37.037 0.00 0.00 0.00 2.87
171 172 1.894756 GTACACAAACCGGCAGCCA 60.895 57.895 13.30 0.00 0.00 4.75
179 180 9.072294 GTTTATGATAGCAAATGTACACAAACC 57.928 33.333 0.00 0.00 0.00 3.27
184 185 9.046296 AGCTAGTTTATGATAGCAAATGTACAC 57.954 33.333 0.00 0.00 45.54 2.90
237 238 2.965831 TCAACTTCACTAGCACAGTCCT 59.034 45.455 0.00 0.00 34.26 3.85
241 242 7.426929 AGTAATTTCAACTTCACTAGCACAG 57.573 36.000 0.00 0.00 0.00 3.66
245 246 8.535690 ACAGTAGTAATTTCAACTTCACTAGC 57.464 34.615 0.00 0.00 0.00 3.42
251 252 9.434559 GTGTTTGACAGTAGTAATTTCAACTTC 57.565 33.333 0.00 0.00 0.00 3.01
259 260 5.944007 GGATGGGTGTTTGACAGTAGTAATT 59.056 40.000 0.00 0.00 0.00 1.40
281 282 1.854939 TCCCTTCCTGTATCGGTAGGA 59.145 52.381 4.31 0.00 42.47 2.94
294 295 0.463833 AATTCGCCGATGTCCCTTCC 60.464 55.000 0.00 0.00 0.00 3.46
295 296 0.657840 CAATTCGCCGATGTCCCTTC 59.342 55.000 0.00 0.00 0.00 3.46
296 297 0.251916 TCAATTCGCCGATGTCCCTT 59.748 50.000 0.00 0.00 0.00 3.95
318 339 6.551385 CAATGTCCTATTGCTGATTCCTAC 57.449 41.667 0.00 0.00 0.00 3.18
343 364 3.843893 AACAGAAAGGGCAAAAGCATT 57.156 38.095 0.00 0.00 0.00 3.56
354 375 3.572584 GCTCAGCATTCAAACAGAAAGG 58.427 45.455 0.00 0.00 40.22 3.11
368 389 1.221466 CGGAAGTTCAACGCTCAGCA 61.221 55.000 5.01 0.00 0.00 4.41
382 403 2.482721 ACCAATAACGAAGCAACGGAAG 59.517 45.455 7.39 0.00 37.61 3.46
393 414 7.148255 ACGACTACTGTATGTAACCAATAACGA 60.148 37.037 0.00 0.00 0.00 3.85
406 427 0.870307 GCCCGCACGACTACTGTATG 60.870 60.000 0.00 0.00 0.00 2.39
408 429 2.879907 GCCCGCACGACTACTGTA 59.120 61.111 0.00 0.00 0.00 2.74
424 448 1.269448 TCCTGTTCTTTTTCCATGCGC 59.731 47.619 0.00 0.00 0.00 6.09
444 468 4.497300 GTCTACATGCCAAATTGCAATGT 58.503 39.130 13.82 3.97 45.84 2.71
453 477 4.497300 GTTAGGTACGTCTACATGCCAAA 58.503 43.478 0.00 0.00 0.00 3.28
462 486 2.290008 TGGACACGGTTAGGTACGTCTA 60.290 50.000 0.00 0.00 42.04 2.59
530 554 2.757868 CTCCAGACTCCAGATTCGAAGT 59.242 50.000 3.35 0.00 0.00 3.01
578 602 3.382865 TCTCTGAATCGATCCAAGACCAG 59.617 47.826 0.00 0.00 0.00 4.00
610 634 1.621317 GCTATAGAGTTCCTGCCCCTC 59.379 57.143 3.21 0.00 0.00 4.30
611 635 1.221781 AGCTATAGAGTTCCTGCCCCT 59.778 52.381 3.21 0.00 0.00 4.79
751 783 4.081420 ACTGCACAAGTTCAGATAGTAGGG 60.081 45.833 6.85 0.00 34.57 3.53
769 801 3.260884 AGACTCGGATAAAAAGGACTGCA 59.739 43.478 0.00 0.00 0.00 4.41
770 802 3.863041 AGACTCGGATAAAAAGGACTGC 58.137 45.455 0.00 0.00 0.00 4.40
771 803 5.073311 TGAGACTCGGATAAAAAGGACTG 57.927 43.478 0.00 0.00 0.00 3.51
772 804 5.017490 TCTGAGACTCGGATAAAAAGGACT 58.983 41.667 10.07 0.00 0.00 3.85
773 805 5.326200 TCTGAGACTCGGATAAAAAGGAC 57.674 43.478 10.07 0.00 0.00 3.85
774 806 5.995565 TTCTGAGACTCGGATAAAAAGGA 57.004 39.130 14.79 0.00 30.80 3.36
775 807 5.932303 TGTTTCTGAGACTCGGATAAAAAGG 59.068 40.000 14.79 0.00 30.80 3.11
785 984 4.757799 TCTCTTCTGTTTCTGAGACTCG 57.242 45.455 0.00 0.00 31.53 4.18
788 987 4.565022 CCCTTCTCTTCTGTTTCTGAGAC 58.435 47.826 0.00 0.00 35.60 3.36
802 1001 3.640407 TGCAAGCGGCCCTTCTCT 61.640 61.111 0.00 0.00 43.89 3.10
806 1005 3.574074 ATGAGTGCAAGCGGCCCTT 62.574 57.895 0.00 0.00 43.89 3.95
808 1007 3.512516 GATGAGTGCAAGCGGCCC 61.513 66.667 0.00 0.00 43.89 5.80
809 1008 2.747460 TGATGAGTGCAAGCGGCC 60.747 61.111 0.00 0.00 43.89 6.13
810 1009 2.758089 CCTGATGAGTGCAAGCGGC 61.758 63.158 0.00 0.00 45.13 6.53
811 1010 2.758089 GCCTGATGAGTGCAAGCGG 61.758 63.158 0.00 0.00 0.00 5.52
812 1011 2.758089 GGCCTGATGAGTGCAAGCG 61.758 63.158 0.00 0.00 0.00 4.68
813 1012 2.758089 CGGCCTGATGAGTGCAAGC 61.758 63.158 0.00 0.00 0.00 4.01
814 1013 2.758089 GCGGCCTGATGAGTGCAAG 61.758 63.158 0.00 0.00 0.00 4.01
815 1014 2.747460 GCGGCCTGATGAGTGCAA 60.747 61.111 0.00 0.00 0.00 4.08
816 1015 3.963687 CTGCGGCCTGATGAGTGCA 62.964 63.158 0.00 0.00 0.00 4.57
817 1016 3.200593 CTGCGGCCTGATGAGTGC 61.201 66.667 0.00 0.00 0.00 4.40
818 1017 1.812922 GACTGCGGCCTGATGAGTG 60.813 63.158 0.00 0.00 0.00 3.51
858 1057 4.947147 GACCGCCACCACCTGCAA 62.947 66.667 0.00 0.00 0.00 4.08
862 1061 3.168528 AACAGACCGCCACCACCT 61.169 61.111 0.00 0.00 0.00 4.00
863 1062 2.978010 CAACAGACCGCCACCACC 60.978 66.667 0.00 0.00 0.00 4.61
864 1063 3.660111 GCAACAGACCGCCACCAC 61.660 66.667 0.00 0.00 0.00 4.16
865 1064 4.182433 TGCAACAGACCGCCACCA 62.182 61.111 0.00 0.00 0.00 4.17
866 1065 3.357079 CTGCAACAGACCGCCACC 61.357 66.667 0.00 0.00 32.44 4.61
867 1066 4.030452 GCTGCAACAGACCGCCAC 62.030 66.667 0.00 0.00 32.44 5.01
868 1067 3.772853 AAGCTGCAACAGACCGCCA 62.773 57.895 1.02 0.00 32.44 5.69
870 1069 2.558313 GAAGCTGCAACAGACCGC 59.442 61.111 1.02 0.00 32.44 5.68
871 1070 2.856032 CGAAGCTGCAACAGACCG 59.144 61.111 1.02 0.00 32.44 4.79
917 1126 3.537206 AACTGAGGTGCCGTGGCTC 62.537 63.158 12.84 8.48 42.51 4.70
919 1128 3.050275 GAACTGAGGTGCCGTGGC 61.050 66.667 3.30 3.30 42.35 5.01
920 1129 2.738521 CGAACTGAGGTGCCGTGG 60.739 66.667 0.00 0.00 0.00 4.94
921 1130 2.738521 CCGAACTGAGGTGCCGTG 60.739 66.667 0.00 0.00 0.00 4.94
946 1155 1.272480 CCCTCCCAAACCTTAACCTGG 60.272 57.143 0.00 0.00 0.00 4.45
977 1186 0.636647 GGATTTGGGGGAGATGGGTT 59.363 55.000 0.00 0.00 0.00 4.11
1017 1259 0.107214 TCAATCTTCATCCCACCGGC 60.107 55.000 0.00 0.00 0.00 6.13
1094 1336 2.123428 GGCGCGGGAGTACCTCTTA 61.123 63.158 8.83 0.00 36.97 2.10
1111 1353 4.468689 GGAGGAAAGGGACGGCGG 62.469 72.222 13.24 0.00 0.00 6.13
1112 1354 4.468689 GGGAGGAAAGGGACGGCG 62.469 72.222 4.80 4.80 0.00 6.46
1113 1355 4.111053 GGGGAGGAAAGGGACGGC 62.111 72.222 0.00 0.00 0.00 5.68
1114 1356 3.408853 GGGGGAGGAAAGGGACGG 61.409 72.222 0.00 0.00 0.00 4.79
1115 1357 1.571773 AATGGGGGAGGAAAGGGACG 61.572 60.000 0.00 0.00 0.00 4.79
1116 1358 0.259065 GAATGGGGGAGGAAAGGGAC 59.741 60.000 0.00 0.00 0.00 4.46
1117 1359 1.279025 CGAATGGGGGAGGAAAGGGA 61.279 60.000 0.00 0.00 0.00 4.20
1118 1360 1.227383 CGAATGGGGGAGGAAAGGG 59.773 63.158 0.00 0.00 0.00 3.95
1119 1361 0.623723 TTCGAATGGGGGAGGAAAGG 59.376 55.000 0.00 0.00 0.00 3.11
1120 1362 2.576615 GATTCGAATGGGGGAGGAAAG 58.423 52.381 16.96 0.00 0.00 2.62
1132 1374 3.133003 ACGAGACTGGAATGGATTCGAAT 59.867 43.478 11.20 11.20 37.67 3.34
1156 1791 0.314302 ACCTATCGGCGGAAATCGAG 59.686 55.000 7.21 0.00 42.43 4.04
1170 1805 1.224592 CCCTGCCGCAGAAACCTAT 59.775 57.895 22.35 0.00 32.44 2.57
1191 1826 1.736645 CGAAACTCGCCATCCACGT 60.737 57.895 0.00 0.00 31.14 4.49
1247 1882 2.416547 CGTCCATACAGCTGAAAACCTG 59.583 50.000 23.35 7.71 35.26 4.00
1301 1954 7.254932 GCATCAGCCTCTAATAAAAGTGGTAAG 60.255 40.741 0.00 0.00 33.53 2.34
1305 1958 5.128919 AGCATCAGCCTCTAATAAAAGTGG 58.871 41.667 0.00 0.00 43.56 4.00
1379 2032 0.179145 ATCCTTCTAACACCGCGACG 60.179 55.000 8.23 0.00 0.00 5.12
1435 2088 5.299531 AGCACTACTAGTTGCTTCGATGATA 59.700 40.000 14.96 0.00 31.73 2.15
1458 2111 9.323985 CTTTTCTGTGGATAGAGATTTTCCTAG 57.676 37.037 0.00 0.00 0.00 3.02
1473 2126 4.766891 GTCCATCATTTCCTTTTCTGTGGA 59.233 41.667 0.00 0.00 0.00 4.02
1524 2363 7.713507 CCGGTACTGATCATTTCCTTTTATGTA 59.286 37.037 2.31 0.00 0.00 2.29
1526 2365 6.765989 TCCGGTACTGATCATTTCCTTTTATG 59.234 38.462 2.31 0.00 0.00 1.90
1531 2370 4.408921 TCATCCGGTACTGATCATTTCCTT 59.591 41.667 2.31 0.00 27.15 3.36
1532 2371 3.967326 TCATCCGGTACTGATCATTTCCT 59.033 43.478 2.31 0.00 27.15 3.36
1533 2372 4.336889 TCATCCGGTACTGATCATTTCC 57.663 45.455 2.31 0.00 27.15 3.13
1539 2378 3.654414 GGTTGATCATCCGGTACTGATC 58.346 50.000 24.72 24.72 45.18 2.92
1565 2404 0.520619 GTGCTACTAAAAAGCGGCGC 60.521 55.000 26.86 26.86 43.11 6.53
1611 2450 6.314896 CCTGTGTCTAGAGATTTTCCATTGAC 59.685 42.308 0.00 0.00 0.00 3.18
1616 2455 6.270000 TCTTTCCTGTGTCTAGAGATTTTCCA 59.730 38.462 0.00 0.00 0.00 3.53
1669 2508 5.632764 TGTTCACAATACATCCAATTTTGCG 59.367 36.000 0.00 0.00 0.00 4.85
1776 2622 4.332819 CAGATGACTCCGGTGGTAAAATTC 59.667 45.833 8.63 0.00 0.00 2.17
1803 2649 4.459331 CGAATTGCACGCCACGGG 62.459 66.667 0.00 0.00 0.00 5.28
1844 2690 7.442062 TCAATGATTGCTAAATCGCTAGAATGA 59.558 33.333 0.00 0.00 44.47 2.57
1965 2811 1.208052 CCCTTAGACTTAGCAGCAGCA 59.792 52.381 3.17 0.00 45.49 4.41
1966 2812 1.208293 ACCCTTAGACTTAGCAGCAGC 59.792 52.381 0.00 0.00 42.56 5.25
1967 2813 2.480416 CGACCCTTAGACTTAGCAGCAG 60.480 54.545 0.00 0.00 0.00 4.24
2032 2878 4.199432 TGCAGAAGTCAATCTCCTTCTC 57.801 45.455 0.00 0.00 44.19 2.87
2092 2938 7.824289 GTGCAATCTATAAGGACATATGGCTTA 59.176 37.037 8.85 5.79 0.00 3.09
2095 2941 5.355350 GGTGCAATCTATAAGGACATATGGC 59.645 44.000 7.80 3.17 0.00 4.40
2152 3000 1.017387 GATCCATCGCTTTCGCCTTT 58.983 50.000 0.00 0.00 35.26 3.11
2470 3318 9.502091 TCAAATACAAGTAAAGCAATAGTGTCT 57.498 29.630 0.00 0.00 0.00 3.41
2485 3333 9.533831 AACAGAAGGGATAAATCAAATACAAGT 57.466 29.630 0.00 0.00 0.00 3.16
2491 3339 6.152661 TGCGAAACAGAAGGGATAAATCAAAT 59.847 34.615 0.00 0.00 0.00 2.32
2501 3349 1.879380 CACAATGCGAAACAGAAGGGA 59.121 47.619 0.00 0.00 0.00 4.20
2514 3362 0.108992 CAGTCATGGTGGCACAATGC 60.109 55.000 26.87 21.23 44.16 3.56
2717 3568 2.433436 CTTACACTTGGTTAGCACCCC 58.567 52.381 0.00 0.00 43.49 4.95
3135 3988 7.089538 TCAAAATCAAATGTGTCGTGCATAAT 58.910 30.769 0.00 0.00 0.00 1.28
3223 4076 6.906157 AGTGTCTGGTCATGAATGAAAAAT 57.094 33.333 0.00 0.00 38.75 1.82
3384 4240 6.763610 AGTGAATAGCTTTACATAGGCAGTTC 59.236 38.462 0.00 0.00 0.00 3.01
3411 4267 1.801771 TCGTAGGCAAATGGAACGTTG 59.198 47.619 5.00 0.00 35.21 4.10
3514 4377 4.498682 GGCTAATGCATGAAGCTTAACAGG 60.499 45.833 25.30 0.00 45.94 4.00
3515 4378 4.096833 TGGCTAATGCATGAAGCTTAACAG 59.903 41.667 25.30 0.00 45.94 3.16
3532 4397 1.751924 ACTTTTGGTTGCGTTGGCTAA 59.248 42.857 0.00 0.00 40.82 3.09
3647 4782 4.151121 CCTCTTGAGCCATATCTCTGAGA 58.849 47.826 10.23 10.23 36.97 3.27
3648 4783 3.306225 GCCTCTTGAGCCATATCTCTGAG 60.306 52.174 0.00 0.00 35.87 3.35
3649 4784 2.632028 GCCTCTTGAGCCATATCTCTGA 59.368 50.000 0.00 0.00 34.29 3.27
3650 4785 3.042871 GCCTCTTGAGCCATATCTCTG 57.957 52.381 0.00 0.00 34.29 3.35
3691 4826 5.920193 TTATCTAAAAATTGCTGCTGCCT 57.080 34.783 13.47 0.00 38.71 4.75
3774 4910 3.834231 ACTTTTGGATGCATTGGCTAGTT 59.166 39.130 0.00 0.00 41.91 2.24
3784 4920 2.270352 AGTTCGGACTTTTGGATGCA 57.730 45.000 0.00 0.00 29.87 3.96
3788 4924 2.967201 TCCACTAGTTCGGACTTTTGGA 59.033 45.455 18.13 18.13 40.56 3.53
3794 4930 1.900486 CCCTTTCCACTAGTTCGGACT 59.100 52.381 0.00 0.00 39.97 3.85
3797 4933 0.613777 AGCCCTTTCCACTAGTTCGG 59.386 55.000 0.00 0.00 0.00 4.30
3805 4941 2.026262 TGGATTGTCTAGCCCTTTCCAC 60.026 50.000 0.00 0.00 0.00 4.02
3835 4971 0.320771 CGTGAGAGGGGGTGTTGAAG 60.321 60.000 0.00 0.00 0.00 3.02
3836 4972 1.052124 ACGTGAGAGGGGGTGTTGAA 61.052 55.000 0.00 0.00 0.00 2.69
3870 5006 0.963962 TCTAAGTCCACCCACGTGTC 59.036 55.000 15.65 0.00 38.41 3.67
3926 5062 3.676291 TCTAAAAATTGTTGCTGCCCC 57.324 42.857 0.00 0.00 0.00 5.80
3946 5082 4.322057 AGTCCTGGCTTCCACAATTTAT 57.678 40.909 0.00 0.00 0.00 1.40
4006 5142 1.083489 GTTGCGTTGGCTAGTGCATA 58.917 50.000 0.00 0.00 41.91 3.14
4100 5237 7.798596 TGATAAATTCTCAAGGCAGAGATTC 57.201 36.000 9.96 4.80 43.67 2.52
4147 5287 5.298989 TGGAACAGTACACCTACATGTTT 57.701 39.130 2.30 0.00 34.41 2.83
4215 5357 7.678947 ATATTCTCCAAGGATTAAATGAGCG 57.321 36.000 0.00 0.00 0.00 5.03
4399 5542 0.322816 TAAGCAGCAGCCCTTCAAGG 60.323 55.000 0.00 0.00 43.56 3.61
4614 5758 8.321353 TGAGTGTGACACTTATTTATTCAGGAT 58.679 33.333 20.42 0.00 45.44 3.24
4631 5775 3.187227 CAGTAATTGCCAGTGAGTGTGAC 59.813 47.826 0.00 0.00 0.00 3.67
4649 5793 5.531122 ACAGTACTTGTCAAGAAGCAGTA 57.469 39.130 19.53 0.00 33.87 2.74
4712 5939 2.440517 TACATGCCATGGATGCAAGT 57.559 45.000 18.40 11.99 42.92 3.16
4792 6023 1.739338 ATCATGGGACCGACTCGAGC 61.739 60.000 13.61 4.47 0.00 5.03
4855 6086 5.983333 AGATCCATCTTGACCCTACAATT 57.017 39.130 0.00 0.00 31.97 2.32
4975 6206 4.009675 CTCACCATGCTTACTTTAAGGCA 58.990 43.478 0.00 0.00 36.31 4.75
5140 6371 5.064707 GTCCATCAAAACTATGTGCACGTAT 59.935 40.000 18.83 7.06 0.00 3.06
5218 6449 3.622459 GCGTAGAAAATTGCGCCAT 57.378 47.368 4.18 0.00 43.52 4.40
5236 6467 2.628178 TCCTATATGGGTCGAGCAGTTG 59.372 50.000 17.59 1.15 36.20 3.16
5378 6622 1.134560 AGGAGATACGACGCCTTGTTC 59.865 52.381 0.00 0.00 36.74 3.18
5564 6817 1.276421 ACTACTGTCAGCCACCATCAC 59.724 52.381 0.00 0.00 0.00 3.06
5604 6858 0.614979 TGAGAGTGCTGGGGACTACC 60.615 60.000 0.00 0.00 39.11 3.18
5703 7274 9.609346 GGAGTACAAAATTAGGCTAATTAGACA 57.391 33.333 27.75 14.04 37.39 3.41
5707 7278 8.215736 GGAGGGAGTACAAAATTAGGCTAATTA 58.784 37.037 27.75 13.16 37.39 1.40
5708 7279 7.061054 GGAGGGAGTACAAAATTAGGCTAATT 58.939 38.462 23.45 23.45 39.92 1.40
5712 7283 3.118371 CGGAGGGAGTACAAAATTAGGCT 60.118 47.826 0.00 0.00 0.00 4.58
5713 7284 3.203716 CGGAGGGAGTACAAAATTAGGC 58.796 50.000 0.00 0.00 0.00 3.93
5714 7285 4.482952 ACGGAGGGAGTACAAAATTAGG 57.517 45.455 0.00 0.00 0.00 2.69
5715 7286 4.874396 GGAACGGAGGGAGTACAAAATTAG 59.126 45.833 0.00 0.00 0.00 1.73
5716 7287 4.286549 TGGAACGGAGGGAGTACAAAATTA 59.713 41.667 0.00 0.00 0.00 1.40
5717 7288 3.073356 TGGAACGGAGGGAGTACAAAATT 59.927 43.478 0.00 0.00 0.00 1.82
5718 7289 2.640826 TGGAACGGAGGGAGTACAAAAT 59.359 45.455 0.00 0.00 0.00 1.82
5719 7290 2.048601 TGGAACGGAGGGAGTACAAAA 58.951 47.619 0.00 0.00 0.00 2.44
5720 7291 1.719529 TGGAACGGAGGGAGTACAAA 58.280 50.000 0.00 0.00 0.00 2.83
5721 7292 1.719529 TTGGAACGGAGGGAGTACAA 58.280 50.000 0.00 0.00 0.00 2.41
5722 7293 1.719529 TTTGGAACGGAGGGAGTACA 58.280 50.000 0.00 0.00 0.00 2.90
5723 7294 3.345508 AATTTGGAACGGAGGGAGTAC 57.654 47.619 0.00 0.00 0.00 2.73
5724 7295 4.098894 AGTAATTTGGAACGGAGGGAGTA 58.901 43.478 0.00 0.00 0.00 2.59
5725 7296 2.910977 AGTAATTTGGAACGGAGGGAGT 59.089 45.455 0.00 0.00 0.00 3.85
5726 7297 3.629142 AGTAATTTGGAACGGAGGGAG 57.371 47.619 0.00 0.00 0.00 4.30
5727 7298 3.073356 ACAAGTAATTTGGAACGGAGGGA 59.927 43.478 0.00 0.00 41.25 4.20
5728 7299 3.418047 ACAAGTAATTTGGAACGGAGGG 58.582 45.455 0.00 0.00 41.25 4.30
5729 7300 3.124636 CGACAAGTAATTTGGAACGGAGG 59.875 47.826 0.00 0.00 41.25 4.30
5730 7301 3.424433 GCGACAAGTAATTTGGAACGGAG 60.424 47.826 0.00 0.00 41.25 4.63
5731 7302 2.481185 GCGACAAGTAATTTGGAACGGA 59.519 45.455 0.00 0.00 41.25 4.69
5732 7303 2.482721 AGCGACAAGTAATTTGGAACGG 59.517 45.455 0.00 0.00 41.25 4.44
5733 7304 3.185594 TCAGCGACAAGTAATTTGGAACG 59.814 43.478 0.00 0.00 41.25 3.95
5734 7305 4.742438 TCAGCGACAAGTAATTTGGAAC 57.258 40.909 0.00 0.00 41.25 3.62
5735 7306 5.759506 TTTCAGCGACAAGTAATTTGGAA 57.240 34.783 0.00 0.00 41.25 3.53
5736 7307 5.335583 CCATTTCAGCGACAAGTAATTTGGA 60.336 40.000 0.00 0.00 41.25 3.53
5737 7308 4.858692 CCATTTCAGCGACAAGTAATTTGG 59.141 41.667 0.00 0.00 41.25 3.28
5738 7309 5.698832 TCCATTTCAGCGACAAGTAATTTG 58.301 37.500 0.00 0.00 42.68 2.32
5739 7310 5.957842 TCCATTTCAGCGACAAGTAATTT 57.042 34.783 0.00 0.00 0.00 1.82
5740 7311 5.415701 ACATCCATTTCAGCGACAAGTAATT 59.584 36.000 0.00 0.00 0.00 1.40
5741 7312 4.943705 ACATCCATTTCAGCGACAAGTAAT 59.056 37.500 0.00 0.00 0.00 1.89
5742 7313 4.323417 ACATCCATTTCAGCGACAAGTAA 58.677 39.130 0.00 0.00 0.00 2.24
5743 7314 3.937814 ACATCCATTTCAGCGACAAGTA 58.062 40.909 0.00 0.00 0.00 2.24
5744 7315 2.783135 ACATCCATTTCAGCGACAAGT 58.217 42.857 0.00 0.00 0.00 3.16
5745 7316 4.813161 AGATACATCCATTTCAGCGACAAG 59.187 41.667 0.00 0.00 0.00 3.16
5746 7317 4.769688 AGATACATCCATTTCAGCGACAA 58.230 39.130 0.00 0.00 0.00 3.18
5747 7318 4.406648 AGATACATCCATTTCAGCGACA 57.593 40.909 0.00 0.00 0.00 4.35
5748 7319 5.773575 TCTAGATACATCCATTTCAGCGAC 58.226 41.667 0.00 0.00 0.00 5.19
5749 7320 6.040955 AGTTCTAGATACATCCATTTCAGCGA 59.959 38.462 0.00 0.00 0.00 4.93
5750 7321 6.219473 AGTTCTAGATACATCCATTTCAGCG 58.781 40.000 0.00 0.00 0.00 5.18
5751 7322 9.547753 TTTAGTTCTAGATACATCCATTTCAGC 57.452 33.333 0.00 0.00 0.00 4.26
5777 7348 8.191446 GCACGTATGGATGTATCTAGATGTATT 58.809 37.037 15.79 0.00 29.44 1.89
5778 7349 7.467403 CGCACGTATGGATGTATCTAGATGTAT 60.467 40.741 15.79 9.11 29.44 2.29
5779 7350 6.183360 CGCACGTATGGATGTATCTAGATGTA 60.183 42.308 15.79 4.44 29.44 2.29
5780 7351 5.392057 CGCACGTATGGATGTATCTAGATGT 60.392 44.000 15.79 1.25 30.36 3.06
5781 7352 5.030936 CGCACGTATGGATGTATCTAGATG 58.969 45.833 15.79 0.00 0.00 2.90
5782 7353 4.941873 TCGCACGTATGGATGTATCTAGAT 59.058 41.667 10.73 10.73 0.00 1.98
5783 7354 4.153655 GTCGCACGTATGGATGTATCTAGA 59.846 45.833 0.00 0.00 0.00 2.43
5784 7355 4.083484 TGTCGCACGTATGGATGTATCTAG 60.083 45.833 0.00 0.00 0.00 2.43
5785 7356 3.816523 TGTCGCACGTATGGATGTATCTA 59.183 43.478 0.00 0.00 0.00 1.98
5786 7357 2.621526 TGTCGCACGTATGGATGTATCT 59.378 45.455 0.00 0.00 0.00 1.98
5787 7358 3.007979 TGTCGCACGTATGGATGTATC 57.992 47.619 0.00 0.00 0.00 2.24
5788 7359 3.181479 ACTTGTCGCACGTATGGATGTAT 60.181 43.478 0.00 0.00 0.00 2.29
5789 7360 2.164827 ACTTGTCGCACGTATGGATGTA 59.835 45.455 0.00 0.00 0.00 2.29
5790 7361 1.067142 ACTTGTCGCACGTATGGATGT 60.067 47.619 0.00 0.00 0.00 3.06
5791 7362 1.640428 ACTTGTCGCACGTATGGATG 58.360 50.000 0.00 0.00 0.00 3.51
5792 7363 3.513680 TTACTTGTCGCACGTATGGAT 57.486 42.857 0.00 0.00 0.00 3.41
5793 7364 3.513680 ATTACTTGTCGCACGTATGGA 57.486 42.857 0.00 0.00 0.00 3.41
5794 7365 3.301579 CGAATTACTTGTCGCACGTATGG 60.302 47.826 0.00 0.00 0.00 2.74
5795 7366 3.301579 CCGAATTACTTGTCGCACGTATG 60.302 47.826 0.00 0.00 35.93 2.39
5796 7367 2.855963 CCGAATTACTTGTCGCACGTAT 59.144 45.455 0.00 0.00 35.93 3.06
5797 7368 2.095314 TCCGAATTACTTGTCGCACGTA 60.095 45.455 0.00 0.00 35.93 3.57
5798 7369 1.065358 CCGAATTACTTGTCGCACGT 58.935 50.000 0.00 0.00 35.93 4.49
5799 7370 1.342555 TCCGAATTACTTGTCGCACG 58.657 50.000 0.00 0.00 35.93 5.34
5800 7371 2.471749 CGTTCCGAATTACTTGTCGCAC 60.472 50.000 0.00 0.00 35.93 5.34
5801 7372 1.722464 CGTTCCGAATTACTTGTCGCA 59.278 47.619 0.00 0.00 35.93 5.10
5802 7373 1.060122 CCGTTCCGAATTACTTGTCGC 59.940 52.381 0.00 0.00 35.93 5.19
5803 7374 2.597305 CTCCGTTCCGAATTACTTGTCG 59.403 50.000 0.00 0.00 37.01 4.35
5804 7375 2.928116 CCTCCGTTCCGAATTACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
5805 7376 2.354403 CCCTCCGTTCCGAATTACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
5806 7377 2.093869 TCCCTCCGTTCCGAATTACTTG 60.094 50.000 0.00 0.00 0.00 3.16
5807 7378 2.167900 CTCCCTCCGTTCCGAATTACTT 59.832 50.000 0.00 0.00 0.00 2.24
5808 7379 1.755380 CTCCCTCCGTTCCGAATTACT 59.245 52.381 0.00 0.00 0.00 2.24
5809 7380 1.479730 ACTCCCTCCGTTCCGAATTAC 59.520 52.381 0.00 0.00 0.00 1.89
5810 7381 1.856629 ACTCCCTCCGTTCCGAATTA 58.143 50.000 0.00 0.00 0.00 1.40
5811 7382 1.479730 GTACTCCCTCCGTTCCGAATT 59.520 52.381 0.00 0.00 0.00 2.17
5812 7383 1.109609 GTACTCCCTCCGTTCCGAAT 58.890 55.000 0.00 0.00 0.00 3.34
5813 7384 0.967380 GGTACTCCCTCCGTTCCGAA 60.967 60.000 0.00 0.00 0.00 4.30
5814 7385 1.379044 GGTACTCCCTCCGTTCCGA 60.379 63.158 0.00 0.00 0.00 4.55
5815 7386 0.969409 AAGGTACTCCCTCCGTTCCG 60.969 60.000 0.00 0.00 45.47 4.30
5816 7387 0.822811 GAAGGTACTCCCTCCGTTCC 59.177 60.000 0.00 0.00 45.47 3.62
5817 7388 1.849977 AGAAGGTACTCCCTCCGTTC 58.150 55.000 0.00 0.00 45.47 3.95
5818 7389 3.463048 TTAGAAGGTACTCCCTCCGTT 57.537 47.619 0.00 0.00 45.47 4.44
5819 7390 3.684408 ATTAGAAGGTACTCCCTCCGT 57.316 47.619 0.00 0.00 45.47 4.69
5820 7391 4.022155 GCTAATTAGAAGGTACTCCCTCCG 60.022 50.000 16.85 0.00 45.47 4.63
5821 7392 4.283978 GGCTAATTAGAAGGTACTCCCTCC 59.716 50.000 16.85 0.00 45.47 4.30
5822 7393 5.149239 AGGCTAATTAGAAGGTACTCCCTC 58.851 45.833 16.85 0.00 45.47 4.30
5823 7394 7.795171 AATTAGGCTAATTAGAAGGTACTCCCT 59.205 37.037 26.73 11.27 39.97 4.20
5824 7395 6.990908 TTAGGCTAATTAGAAGGTACTCCC 57.009 41.667 16.85 4.47 38.49 4.30
5825 7396 9.848710 AAAATTAGGCTAATTAGAAGGTACTCC 57.151 33.333 27.75 5.16 35.70 3.85
5839 7410 7.228590 AGTTCCACAGTACAAAATTAGGCTAA 58.771 34.615 9.79 9.79 0.00 3.09
5840 7411 6.775708 AGTTCCACAGTACAAAATTAGGCTA 58.224 36.000 0.00 0.00 0.00 3.93
5858 7431 1.474320 CCACGTCTTGTTGGAGTTCCA 60.474 52.381 0.00 0.00 45.94 3.53
5859 7432 1.226746 CCACGTCTTGTTGGAGTTCC 58.773 55.000 0.00 0.00 0.00 3.62
5861 7434 0.180406 AGCCACGTCTTGTTGGAGTT 59.820 50.000 0.00 0.00 0.00 3.01
5862 7435 0.532862 CAGCCACGTCTTGTTGGAGT 60.533 55.000 0.00 0.00 0.00 3.85
5863 7436 0.532862 ACAGCCACGTCTTGTTGGAG 60.533 55.000 0.00 0.00 0.00 3.86
5864 7437 0.531974 GACAGCCACGTCTTGTTGGA 60.532 55.000 0.00 0.00 32.92 3.53
5865 7438 1.831389 CGACAGCCACGTCTTGTTGG 61.831 60.000 0.00 0.00 33.54 3.77
5866 7439 1.564622 CGACAGCCACGTCTTGTTG 59.435 57.895 0.00 0.00 33.54 3.33
5867 7440 1.594293 CCGACAGCCACGTCTTGTT 60.594 57.895 0.00 0.00 33.54 2.83
5868 7441 2.029073 CCGACAGCCACGTCTTGT 59.971 61.111 0.00 0.00 33.54 3.16
5869 7442 3.414700 GCCGACAGCCACGTCTTG 61.415 66.667 0.00 0.00 33.54 3.02
5870 7443 3.165160 AAGCCGACAGCCACGTCTT 62.165 57.895 0.00 0.00 45.47 3.01
5892 7465 2.980568 TCCCACTAAAACGATGCGATT 58.019 42.857 0.00 0.00 0.00 3.34
5931 7507 0.183492 TGCAAGGGGGTATCAGATGC 59.817 55.000 0.00 0.00 0.00 3.91
5956 7540 4.381398 CCCGATGAGCATCCATAGTAGAAG 60.381 50.000 4.98 0.00 34.40 2.85
5957 7541 3.511540 CCCGATGAGCATCCATAGTAGAA 59.488 47.826 4.98 0.00 34.40 2.10
5958 7542 3.092301 CCCGATGAGCATCCATAGTAGA 58.908 50.000 4.98 0.00 34.40 2.59
5984 7576 3.648339 TCATTTTTCTTCTGCCACAGC 57.352 42.857 0.00 0.00 40.48 4.40
5986 7578 4.644234 TGTCTTCATTTTTCTTCTGCCACA 59.356 37.500 0.00 0.00 0.00 4.17
6058 7661 1.775385 TCATCAGGTGTCAGCCGATA 58.225 50.000 0.51 0.00 0.00 2.92
6059 7662 0.904649 TTCATCAGGTGTCAGCCGAT 59.095 50.000 0.00 0.00 0.00 4.18
6060 7663 0.037326 GTTCATCAGGTGTCAGCCGA 60.037 55.000 0.00 0.00 0.00 5.54
6061 7664 1.354337 CGTTCATCAGGTGTCAGCCG 61.354 60.000 0.00 0.00 0.00 5.52
6062 7665 1.639298 GCGTTCATCAGGTGTCAGCC 61.639 60.000 0.00 0.00 0.00 4.85
6213 7818 4.435970 CAGCAGGAGGGCATGGCA 62.436 66.667 22.06 0.00 35.83 4.92
6257 7862 2.590007 CTAGTGGGCATGGCGAGC 60.590 66.667 13.76 5.74 0.00 5.03
6305 7910 1.173913 ACGCAGGATAAGTTTTGGCC 58.826 50.000 0.00 0.00 0.00 5.36
6334 7939 0.884704 CCGCTGGCACTACAAACTGT 60.885 55.000 0.00 0.00 0.00 3.55
6364 7969 3.821033 GAGGTAGCACACAATTTGGAAGT 59.179 43.478 0.78 0.00 0.00 3.01
6377 7982 0.460311 ATGGCACGTAGAGGTAGCAC 59.540 55.000 0.00 0.00 0.00 4.40
6420 8028 8.360390 TCCAAATCTTTCTTTCTTTTCTTAGCC 58.640 33.333 0.00 0.00 0.00 3.93
6463 8071 2.092211 AGCTCGAGTTTATTTTGTCGCG 59.908 45.455 15.13 0.00 32.41 5.87
6476 8084 2.345244 CAAGGTGCCAGCTCGAGT 59.655 61.111 15.13 0.00 0.00 4.18
6526 8134 1.326245 CTAGTCACTCTCGCAGTCTCG 59.674 57.143 0.00 0.00 30.26 4.04
6527 8135 1.668751 CCTAGTCACTCTCGCAGTCTC 59.331 57.143 0.00 0.00 30.26 3.36
6528 8136 1.279558 TCCTAGTCACTCTCGCAGTCT 59.720 52.381 0.00 0.00 30.26 3.24
6529 8137 1.740297 TCCTAGTCACTCTCGCAGTC 58.260 55.000 0.00 0.00 30.26 3.51
6530 8138 2.201921 TTCCTAGTCACTCTCGCAGT 57.798 50.000 0.00 0.00 34.67 4.40
6531 8139 3.490078 GGAATTCCTAGTCACTCTCGCAG 60.490 52.174 17.73 0.00 0.00 5.18
6532 8140 2.427453 GGAATTCCTAGTCACTCTCGCA 59.573 50.000 17.73 0.00 0.00 5.10
6533 8141 2.427453 TGGAATTCCTAGTCACTCTCGC 59.573 50.000 24.73 0.00 36.82 5.03
6534 8142 4.339530 TGATGGAATTCCTAGTCACTCTCG 59.660 45.833 24.73 0.00 36.82 4.04
6547 8155 3.947834 AGAATGGACGGTTGATGGAATTC 59.052 43.478 0.00 0.00 0.00 2.17
6552 8160 2.093500 TGAGAGAATGGACGGTTGATGG 60.093 50.000 0.00 0.00 0.00 3.51
6553 8161 3.251479 TGAGAGAATGGACGGTTGATG 57.749 47.619 0.00 0.00 0.00 3.07
6557 8165 2.169352 CCAGATGAGAGAATGGACGGTT 59.831 50.000 0.00 0.00 34.60 4.44
6586 8194 2.040043 CCCCAGAGCCAGAGGGAT 60.040 66.667 0.00 0.00 45.80 3.85
6587 8195 3.284251 TCCCCAGAGCCAGAGGGA 61.284 66.667 0.00 0.56 46.54 4.20
6588 8196 2.285668 TTCCCCAGAGCCAGAGGG 60.286 66.667 0.00 0.00 42.44 4.30
6589 8197 3.041469 GCTTCCCCAGAGCCAGAGG 62.041 68.421 0.00 0.00 34.06 3.69
6590 8198 0.689080 TAGCTTCCCCAGAGCCAGAG 60.689 60.000 0.00 0.00 41.03 3.35
6591 8199 0.030705 ATAGCTTCCCCAGAGCCAGA 60.031 55.000 0.00 0.00 41.03 3.86
6592 8200 0.842635 AATAGCTTCCCCAGAGCCAG 59.157 55.000 0.00 0.00 41.03 4.85
6593 8201 1.298953 AAATAGCTTCCCCAGAGCCA 58.701 50.000 0.00 0.00 41.03 4.75
6594 8202 2.302260 GAAAATAGCTTCCCCAGAGCC 58.698 52.381 0.00 0.00 41.03 4.70
6595 8203 2.092158 AGGAAAATAGCTTCCCCAGAGC 60.092 50.000 0.00 0.00 45.28 4.09
6596 8204 3.434310 GGAGGAAAATAGCTTCCCCAGAG 60.434 52.174 0.00 0.00 45.28 3.35
6597 8205 2.509964 GGAGGAAAATAGCTTCCCCAGA 59.490 50.000 0.00 0.00 45.28 3.86
6598 8206 2.423517 GGGAGGAAAATAGCTTCCCCAG 60.424 54.545 6.15 0.00 45.28 4.45
6599 8207 1.569072 GGGAGGAAAATAGCTTCCCCA 59.431 52.381 6.15 0.00 45.28 4.96
6600 8208 2.366640 GGGAGGAAAATAGCTTCCCC 57.633 55.000 6.15 4.15 45.28 4.81
6602 8210 2.170817 ACGAGGGAGGAAAATAGCTTCC 59.829 50.000 0.00 0.00 44.61 3.46
6603 8211 3.545366 ACGAGGGAGGAAAATAGCTTC 57.455 47.619 0.00 0.00 0.00 3.86
6604 8212 3.610911 CAACGAGGGAGGAAAATAGCTT 58.389 45.455 0.00 0.00 0.00 3.74
6605 8213 2.092914 CCAACGAGGGAGGAAAATAGCT 60.093 50.000 0.00 0.00 0.00 3.32
6606 8214 2.289565 CCAACGAGGGAGGAAAATAGC 58.710 52.381 0.00 0.00 0.00 2.97
6618 8226 1.001406 GAGATCCTATGCCCAACGAGG 59.999 57.143 0.00 0.00 37.03 4.63
6619 8227 1.967066 AGAGATCCTATGCCCAACGAG 59.033 52.381 0.00 0.00 0.00 4.18
6620 8228 2.088104 AGAGATCCTATGCCCAACGA 57.912 50.000 0.00 0.00 0.00 3.85
6621 8229 2.874701 CAAAGAGATCCTATGCCCAACG 59.125 50.000 0.00 0.00 0.00 4.10
6622 8230 3.891049 ACAAAGAGATCCTATGCCCAAC 58.109 45.455 0.00 0.00 0.00 3.77
6623 8231 4.591321 AACAAAGAGATCCTATGCCCAA 57.409 40.909 0.00 0.00 0.00 4.12
6624 8232 4.591321 AAACAAAGAGATCCTATGCCCA 57.409 40.909 0.00 0.00 0.00 5.36
6625 8233 4.339530 GGAAAACAAAGAGATCCTATGCCC 59.660 45.833 0.00 0.00 0.00 5.36
6626 8234 4.035675 CGGAAAACAAAGAGATCCTATGCC 59.964 45.833 0.00 0.00 0.00 4.40
6627 8235 4.876107 TCGGAAAACAAAGAGATCCTATGC 59.124 41.667 0.00 0.00 0.00 3.14
6628 8236 5.525378 CCTCGGAAAACAAAGAGATCCTATG 59.475 44.000 0.00 0.00 32.84 2.23
6629 8237 5.189934 ACCTCGGAAAACAAAGAGATCCTAT 59.810 40.000 0.00 0.00 32.84 2.57
6630 8238 4.530946 ACCTCGGAAAACAAAGAGATCCTA 59.469 41.667 0.00 0.00 32.84 2.94
6631 8239 3.328050 ACCTCGGAAAACAAAGAGATCCT 59.672 43.478 0.00 0.00 32.84 3.24
6632 8240 3.676093 ACCTCGGAAAACAAAGAGATCC 58.324 45.455 0.00 0.00 32.84 3.36
6633 8241 4.630505 GGTACCTCGGAAAACAAAGAGATC 59.369 45.833 4.06 0.00 32.84 2.75
6634 8242 4.041198 TGGTACCTCGGAAAACAAAGAGAT 59.959 41.667 14.36 0.00 32.84 2.75
6635 8243 3.388676 TGGTACCTCGGAAAACAAAGAGA 59.611 43.478 14.36 0.00 32.84 3.10
6636 8244 3.497262 GTGGTACCTCGGAAAACAAAGAG 59.503 47.826 14.36 0.00 0.00 2.85
6637 8245 3.135167 AGTGGTACCTCGGAAAACAAAGA 59.865 43.478 14.36 0.00 0.00 2.52
6638 8246 3.473625 AGTGGTACCTCGGAAAACAAAG 58.526 45.455 14.36 0.00 0.00 2.77
6639 8247 3.564053 AGTGGTACCTCGGAAAACAAA 57.436 42.857 14.36 0.00 0.00 2.83
6640 8248 3.564053 AAGTGGTACCTCGGAAAACAA 57.436 42.857 14.36 0.00 0.00 2.83
6641 8249 3.564053 AAAGTGGTACCTCGGAAAACA 57.436 42.857 14.36 0.00 0.00 2.83
6642 8250 5.049198 CCTTAAAAGTGGTACCTCGGAAAAC 60.049 44.000 14.36 0.36 0.00 2.43
6643 8251 5.065235 CCTTAAAAGTGGTACCTCGGAAAA 58.935 41.667 14.36 4.41 0.00 2.29
6644 8252 4.102996 ACCTTAAAAGTGGTACCTCGGAAA 59.897 41.667 14.36 4.07 34.36 3.13
6645 8253 3.647590 ACCTTAAAAGTGGTACCTCGGAA 59.352 43.478 14.36 3.54 34.36 4.30
6646 8254 3.242011 ACCTTAAAAGTGGTACCTCGGA 58.758 45.455 14.36 0.00 34.36 4.55
6647 8255 3.260128 AGACCTTAAAAGTGGTACCTCGG 59.740 47.826 14.36 7.55 36.59 4.63
6648 8256 4.220163 AGAGACCTTAAAAGTGGTACCTCG 59.780 45.833 14.36 0.00 36.59 4.63
6649 8257 5.741962 AGAGACCTTAAAAGTGGTACCTC 57.258 43.478 14.36 9.96 36.59 3.85
6650 8258 5.012871 GGAAGAGACCTTAAAAGTGGTACCT 59.987 44.000 14.36 0.00 36.59 3.08
6651 8259 5.221783 TGGAAGAGACCTTAAAAGTGGTACC 60.222 44.000 4.43 4.43 36.59 3.34
6652 8260 5.861727 TGGAAGAGACCTTAAAAGTGGTAC 58.138 41.667 0.00 0.00 36.59 3.34
6653 8261 6.503560 TTGGAAGAGACCTTAAAAGTGGTA 57.496 37.500 0.00 0.00 36.59 3.25
6654 8262 5.382664 TTGGAAGAGACCTTAAAAGTGGT 57.617 39.130 0.00 0.00 39.60 4.16
6655 8263 5.335976 GCATTGGAAGAGACCTTAAAAGTGG 60.336 44.000 0.00 0.00 31.62 4.00
6656 8264 5.241506 TGCATTGGAAGAGACCTTAAAAGTG 59.758 40.000 0.00 0.00 31.62 3.16
6657 8265 5.385198 TGCATTGGAAGAGACCTTAAAAGT 58.615 37.500 0.00 0.00 31.62 2.66
6658 8266 5.964958 TGCATTGGAAGAGACCTTAAAAG 57.035 39.130 0.00 0.00 31.62 2.27
6659 8267 6.603201 CCTATGCATTGGAAGAGACCTTAAAA 59.397 38.462 21.05 0.00 31.62 1.52
6660 8268 6.122277 CCTATGCATTGGAAGAGACCTTAAA 58.878 40.000 21.05 0.00 31.62 1.52
6661 8269 5.191722 ACCTATGCATTGGAAGAGACCTTAA 59.808 40.000 30.28 0.00 31.62 1.85
6662 8270 4.721776 ACCTATGCATTGGAAGAGACCTTA 59.278 41.667 30.28 0.00 31.62 2.69
6663 8271 3.525199 ACCTATGCATTGGAAGAGACCTT 59.475 43.478 30.28 4.88 34.81 3.50
6664 8272 3.118531 ACCTATGCATTGGAAGAGACCT 58.881 45.455 30.28 5.58 0.00 3.85
6665 8273 3.567478 ACCTATGCATTGGAAGAGACC 57.433 47.619 30.28 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.