AutoCloner

Multiple sequence alignment - TraesCS3B01G194000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS3B01G194000	chr3B	100.000	3292	0	0	1	3292	214286430	214283139	0.000000e+00	6080
1	TraesCS3B01G194000	chr3B	89.426	662	40	14	2660	3292	11237917	11238577	0.000000e+00	808
2	TraesCS3B01G194000	chr3B	91.385	325	28	0	1	325	399964502	399964178	2.330000e-121	446
3	TraesCS3B01G194000	chr3A	92.274	2045	88	36	328	2329	165089569	165087552	0.000000e+00	2837
4	TraesCS3B01G194000	chr3D	94.046	1562	64	16	197	1748	148223123	148224665	0.000000e+00	2342
5	TraesCS3B01G194000	chr3D	89.396	745	52	19	1745	2468	148224722	148225460	0.000000e+00	913
6	TraesCS3B01G194000	chr3D	92.025	326	25	1	1	325	148084257	148084582	1.080000e-124	457
7	TraesCS3B01G194000	chr1B	90.634	662	31	17	2661	3292	40370933	40370273	0.000000e+00	850
8	TraesCS3B01G194000	chr2B	89.985	659	35	16	2660	3289	18927671	18928327	0.000000e+00	822
9	TraesCS3B01G194000	chr2B	94.898	98	4	1	2657	2753	784504342	784504245	5.690000e-33	152
10	TraesCS3B01G194000	chr2B	81.699	153	17	7	1033	1181	85177910	85177765	2.080000e-22	117
11	TraesCS3B01G194000	chr2B	79.739	153	20	6	1033	1181	85074018	85074163	2.090000e-17	100
12	TraesCS3B01G194000	chr4B	89.818	658	37	15	2661	3289	644378062	644378718	0.000000e+00	817
13	TraesCS3B01G194000	chr4B	80.935	278	41	9	1440	1711	380653772	380654043	3.330000e-50	209
14	TraesCS3B01G194000	chr4B	91.667	108	5	3	2661	2765	537632863	537632757	2.650000e-31	147
15	TraesCS3B01G194000	chr2D	94.216	536	30	1	2757	3292	572376229	572375695	0.000000e+00	817
16	TraesCS3B01G194000	chr2D	89.362	658	44	15	2661	3292	44919951	44919294	0.000000e+00	804
17	TraesCS3B01G194000	chr2D	81.526	249	41	5	1442	1686	175331615	175331862	2.000000e-47	200
18	TraesCS3B01G194000	chr2D	80.645	155	19	7	1033	1183	54487979	54487832	3.470000e-20	110
19	TraesCS3B01G194000	chr2D	80.392	153	19	7	1033	1181	54317524	54317669	4.490000e-19	106
20	TraesCS3B01G194000	chr4A	89.666	658	38	14	2664	3292	724779414	724778758	0.000000e+00	811
21	TraesCS3B01G194000	chr4A	89.426	662	40	14	2660	3292	712111298	712110638	0.000000e+00	808
22	TraesCS3B01G194000	chr4A	89.378	659	40	14	2660	3289	712450716	712451373	0.000000e+00	802
23	TraesCS3B01G194000	chr4A	84.993	673	60	15	2660	3292	739876881	739876210	0.000000e+00	645
24	TraesCS3B01G194000	chrUn	93.333	540	34	2	2754	3292	83958167	83957629	0.000000e+00	797
25	TraesCS3B01G194000	chr7D	88.341	669	44	19	2657	3292	20005054	20004387	0.000000e+00	773
26	TraesCS3B01G194000	chr2A	85.586	666	61	17	2660	3292	9319752	9320415	0.000000e+00	665
27	TraesCS3B01G194000	chr2A	81.206	282	43	7	1440	1718	54882610	54882884	5.530000e-53	219
28	TraesCS3B01G194000	chr2A	80.800	250	41	5	1442	1686	175468037	175468284	4.340000e-44	189
29	TraesCS3B01G194000	chr5B	84.036	664	62	18	2660	3292	281364632	281363982	1.690000e-167	599
30	TraesCS3B01G194000	chr5B	90.491	326	30	1	1	325	417410860	417411185	2.350000e-116	429
31	TraesCS3B01G194000	chr5B	94.737	95	5	0	2659	2753	695419594	695419688	7.360000e-32	148
32	TraesCS3B01G194000	chr5B	94.737	95	5	0	2659	2753	695772701	695772795	7.360000e-32	148
33	TraesCS3B01G194000	chr5D	92.025	326	24	2	1	325	512553425	512553101	1.080000e-124	457
34	TraesCS3B01G194000	chr5D	89.908	327	29	4	1	325	253187993	253187669	5.080000e-113	418
35	TraesCS3B01G194000	chr4D	91.265	332	28	1	1	331	474945713	474945382	5.010000e-123	451
36	TraesCS3B01G194000	chr7B	91.104	326	28	1	1	325	369112214	369112539	1.080000e-119	440
37	TraesCS3B01G194000	chr1D	89.970	329	31	2	1	327	263048136	263047808	1.090000e-114	424
38	TraesCS3B01G194000	chr1D	88.529	340	36	3	1	339	249133969	249134306	3.060000e-110	409
39	TraesCS3B01G194000	chr6D	86.577	149	19	1	1438	1586	60487531	60487384	2.630000e-36	163
40	TraesCS3B01G194000	chr6B	86.713	143	18	1	1438	1580	134664377	134664236	1.220000e-34	158
41	TraesCS3B01G194000	chr6A	78.491	265	39	9	1438	1686	77099667	77099405	1.220000e-34	158

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS3B01G194000	chr3B	214283139	214286430	3291	True	6080.0	6080	100.000	1	3292	1	chr3B.!!$R1	3291
1	TraesCS3B01G194000	chr3B	11237917	11238577	660	False	808.0	808	89.426	2660	3292	1	chr3B.!!$F1	632
2	TraesCS3B01G194000	chr3A	165087552	165089569	2017	True	2837.0	2837	92.274	328	2329	1	chr3A.!!$R1	2001
3	TraesCS3B01G194000	chr3D	148223123	148225460	2337	False	1627.5	2342	91.721	197	2468	2	chr3D.!!$F2	2271
4	TraesCS3B01G194000	chr1B	40370273	40370933	660	True	850.0	850	90.634	2661	3292	1	chr1B.!!$R1	631
5	TraesCS3B01G194000	chr2B	18927671	18928327	656	False	822.0	822	89.985	2660	3289	1	chr2B.!!$F1	629
6	TraesCS3B01G194000	chr4B	644378062	644378718	656	False	817.0	817	89.818	2661	3289	1	chr4B.!!$F2	628
7	TraesCS3B01G194000	chr2D	572375695	572376229	534	True	817.0	817	94.216	2757	3292	1	chr2D.!!$R3	535
8	TraesCS3B01G194000	chr2D	44919294	44919951	657	True	804.0	804	89.362	2661	3292	1	chr2D.!!$R1	631
9	TraesCS3B01G194000	chr4A	724778758	724779414	656	True	811.0	811	89.666	2664	3292	1	chr4A.!!$R2	628
10	TraesCS3B01G194000	chr4A	712110638	712111298	660	True	808.0	808	89.426	2660	3292	1	chr4A.!!$R1	632
11	TraesCS3B01G194000	chr4A	712450716	712451373	657	False	802.0	802	89.378	2660	3289	1	chr4A.!!$F1	629
12	TraesCS3B01G194000	chr4A	739876210	739876881	671	True	645.0	645	84.993	2660	3292	1	chr4A.!!$R3	632
13	TraesCS3B01G194000	chrUn	83957629	83958167	538	True	797.0	797	93.333	2754	3292	1	chrUn.!!$R1	538
14	TraesCS3B01G194000	chr7D	20004387	20005054	667	True	773.0	773	88.341	2657	3292	1	chr7D.!!$R1	635
15	TraesCS3B01G194000	chr2A	9319752	9320415	663	False	665.0	665	85.586	2660	3292	1	chr2A.!!$F1	632
16	TraesCS3B01G194000	chr5B	281363982	281364632	650	True	599.0	599	84.036	2660	3292	1	chr5B.!!$R1	632

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
70	71	0.034337	TTGACGGGAAAGAACGAGGG	59.966	55.0	0.0	0.0	0.0	4.30	F
124	125	0.250770	AACCTTTCCGAAGCAGACCC	60.251	55.0	0.0	0.0	0.0	4.46	F
1189	1220	0.255890	ACTGCCCGGTAAGAATGCAT	59.744	50.0	0.0	0.0	0.0	3.96	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1059	1090	0.312416	CGATGATCTCCTGGTCCGTC	59.688	60.0	0.00	0.0	0.00	4.79	R
1425	1464	0.314618	TCTGCATGCACGCACAAATT	59.685	45.0	18.46	0.0	36.86	1.82	R
2645	2783	0.037605	CGGTAAGTGCTCGAAGGGTT	60.038	55.0	0.00	0.0	0.00	4.11	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
18	19	2.362242	ACCGCTTAGCCTGTTCTGA	58.638	52.632	0.00	0.00	0.00	3.27
19	20	0.037232	ACCGCTTAGCCTGTTCTGAC	60.037	55.000	0.00	0.00	0.00	3.51
20	21	0.037326	CCGCTTAGCCTGTTCTGACA	60.037	55.000	0.00	0.00	0.00	3.58
21	22	1.608025	CCGCTTAGCCTGTTCTGACAA	60.608	52.381	0.00	0.00	34.85	3.18
22	23	1.728971	CGCTTAGCCTGTTCTGACAAG	59.271	52.381	0.00	0.00	34.85	3.16
23	24	2.079925	GCTTAGCCTGTTCTGACAAGG	58.920	52.381	0.00	1.26	34.85	3.61
24	25	2.551071	GCTTAGCCTGTTCTGACAAGGT	60.551	50.000	0.00	0.00	34.85	3.50
25	26	3.744660	CTTAGCCTGTTCTGACAAGGTT	58.255	45.455	6.67	3.77	34.85	3.50
26	27	2.262423	AGCCTGTTCTGACAAGGTTC	57.738	50.000	6.67	0.00	34.85	3.62
27	28	1.490490	AGCCTGTTCTGACAAGGTTCA	59.510	47.619	6.67	0.00	34.85	3.18
28	29	2.092429	AGCCTGTTCTGACAAGGTTCAA	60.092	45.455	6.67	0.00	34.85	2.69
29	30	2.687935	GCCTGTTCTGACAAGGTTCAAA	59.312	45.455	6.67	0.00	34.85	2.69
30	31	3.489229	GCCTGTTCTGACAAGGTTCAAAC	60.489	47.826	6.67	0.00	34.85	2.93
31	32	3.694072	CCTGTTCTGACAAGGTTCAAACA	59.306	43.478	0.00	0.00	34.85	2.83
32	33	4.339247	CCTGTTCTGACAAGGTTCAAACAT	59.661	41.667	0.00	0.00	34.85	2.71
33	34	5.530915	CCTGTTCTGACAAGGTTCAAACATA	59.469	40.000	0.00	0.00	34.85	2.29
34	35	6.039270	CCTGTTCTGACAAGGTTCAAACATAA	59.961	38.462	0.00	0.00	34.85	1.90
35	36	7.026631	TGTTCTGACAAGGTTCAAACATAAG	57.973	36.000	0.00	0.00	31.49	1.73
36	37	6.039270	TGTTCTGACAAGGTTCAAACATAAGG	59.961	38.462	0.00	0.00	31.49	2.69
37	38	5.935945	TCTGACAAGGTTCAAACATAAGGA	58.064	37.500	0.00	0.00	0.00	3.36
38	39	5.997746	TCTGACAAGGTTCAAACATAAGGAG	59.002	40.000	0.00	0.00	0.00	3.69
39	40	5.070001	TGACAAGGTTCAAACATAAGGAGG	58.930	41.667	0.00	0.00	0.00	4.30
40	41	4.407365	ACAAGGTTCAAACATAAGGAGGG	58.593	43.478	0.00	0.00	0.00	4.30
41	42	4.105697	ACAAGGTTCAAACATAAGGAGGGA	59.894	41.667	0.00	0.00	0.00	4.20
42	43	4.302559	AGGTTCAAACATAAGGAGGGAC	57.697	45.455	0.00	0.00	0.00	4.46
43	44	3.655777	AGGTTCAAACATAAGGAGGGACA	59.344	43.478	0.00	0.00	0.00	4.02
44	45	4.105697	AGGTTCAAACATAAGGAGGGACAA	59.894	41.667	0.00	0.00	0.00	3.18
45	46	4.459337	GGTTCAAACATAAGGAGGGACAAG	59.541	45.833	0.00	0.00	0.00	3.16
46	47	3.686016	TCAAACATAAGGAGGGACAAGC	58.314	45.455	0.00	0.00	0.00	4.01
47	48	3.330701	TCAAACATAAGGAGGGACAAGCT	59.669	43.478	0.00	0.00	0.00	3.74
48	49	3.636153	AACATAAGGAGGGACAAGCTC	57.364	47.619	0.00	0.00	0.00	4.09
49	50	2.551270	ACATAAGGAGGGACAAGCTCA	58.449	47.619	0.00	0.00	0.00	4.26
50	51	2.912956	ACATAAGGAGGGACAAGCTCAA	59.087	45.455	0.00	0.00	0.00	3.02
51	52	3.525199	ACATAAGGAGGGACAAGCTCAAT	59.475	43.478	0.00	0.00	0.00	2.57
52	53	4.018050	ACATAAGGAGGGACAAGCTCAATT	60.018	41.667	0.00	0.00	0.00	2.32
53	54	2.503895	AGGAGGGACAAGCTCAATTG	57.496	50.000	0.00	0.00	36.22	2.32
54	55	1.988107	AGGAGGGACAAGCTCAATTGA	59.012	47.619	8.12	8.12	34.20	2.57
55	56	2.087646	GGAGGGACAAGCTCAATTGAC	58.912	52.381	3.38	2.06	34.20	3.18
56	57	1.734465	GAGGGACAAGCTCAATTGACG	59.266	52.381	3.38	2.41	34.20	4.35
57	58	0.804989	GGGACAAGCTCAATTGACGG	59.195	55.000	3.38	0.00	34.20	4.79
58	59	0.804989	GGACAAGCTCAATTGACGGG	59.195	55.000	3.38	0.00	34.20	5.28
59	60	1.610624	GGACAAGCTCAATTGACGGGA	60.611	52.381	3.38	0.00	34.20	5.14
60	61	2.151202	GACAAGCTCAATTGACGGGAA	58.849	47.619	3.38	0.00	34.20	3.97
61	62	2.552315	GACAAGCTCAATTGACGGGAAA	59.448	45.455	3.38	0.00	34.20	3.13
62	63	2.554032	ACAAGCTCAATTGACGGGAAAG	59.446	45.455	3.38	0.00	34.20	2.62
63	64	2.813754	CAAGCTCAATTGACGGGAAAGA	59.186	45.455	3.38	0.00	31.55	2.52
64	65	3.140325	AGCTCAATTGACGGGAAAGAA	57.860	42.857	3.38	0.00	0.00	2.52
65	66	2.814336	AGCTCAATTGACGGGAAAGAAC	59.186	45.455	3.38	0.00	0.00	3.01
66	67	2.412847	GCTCAATTGACGGGAAAGAACG	60.413	50.000	3.38	0.00	0.00	3.95
67	68	3.064207	CTCAATTGACGGGAAAGAACGA	58.936	45.455	3.38	0.00	0.00	3.85
68	69	3.064207	TCAATTGACGGGAAAGAACGAG	58.936	45.455	3.38	0.00	0.00	4.18
69	70	2.094762	ATTGACGGGAAAGAACGAGG	57.905	50.000	0.00	0.00	0.00	4.63
70	71	0.034337	TTGACGGGAAAGAACGAGGG	59.966	55.000	0.00	0.00	0.00	4.30
71	72	1.117142	TGACGGGAAAGAACGAGGGT	61.117	55.000	0.00	0.00	0.00	4.34
72	73	0.669625	GACGGGAAAGAACGAGGGTG	60.670	60.000	0.00	0.00	0.00	4.61
73	74	2.033194	CGGGAAAGAACGAGGGTGC	61.033	63.158	0.00	0.00	0.00	5.01
74	75	1.072505	GGGAAAGAACGAGGGTGCA	59.927	57.895	0.00	0.00	0.00	4.57
75	76	0.536460	GGGAAAGAACGAGGGTGCAA	60.536	55.000	0.00	0.00	0.00	4.08
76	77	1.314730	GGAAAGAACGAGGGTGCAAA	58.685	50.000	0.00	0.00	0.00	3.68
77	78	1.266989	GGAAAGAACGAGGGTGCAAAG	59.733	52.381	0.00	0.00	0.00	2.77
78	79	2.218603	GAAAGAACGAGGGTGCAAAGA	58.781	47.619	0.00	0.00	0.00	2.52
79	80	2.568623	AAGAACGAGGGTGCAAAGAT	57.431	45.000	0.00	0.00	0.00	2.40
80	81	3.695830	AAGAACGAGGGTGCAAAGATA	57.304	42.857	0.00	0.00	0.00	1.98
81	82	3.914426	AGAACGAGGGTGCAAAGATAT	57.086	42.857	0.00	0.00	0.00	1.63
82	83	5.353394	AAGAACGAGGGTGCAAAGATATA	57.647	39.130	0.00	0.00	0.00	0.86
83	84	4.950050	AGAACGAGGGTGCAAAGATATAG	58.050	43.478	0.00	0.00	0.00	1.31
84	85	4.406003	AGAACGAGGGTGCAAAGATATAGT	59.594	41.667	0.00	0.00	0.00	2.12
85	86	5.597182	AGAACGAGGGTGCAAAGATATAGTA	59.403	40.000	0.00	0.00	0.00	1.82
86	87	6.267928	AGAACGAGGGTGCAAAGATATAGTAT	59.732	38.462	0.00	0.00	0.00	2.12
87	88	7.450634	AGAACGAGGGTGCAAAGATATAGTATA	59.549	37.037	0.00	0.00	0.00	1.47
88	89	6.921914	ACGAGGGTGCAAAGATATAGTATAC	58.078	40.000	0.00	0.00	0.00	1.47
89	90	6.492429	ACGAGGGTGCAAAGATATAGTATACA	59.508	38.462	5.50	0.00	0.00	2.29
90	91	7.178628	ACGAGGGTGCAAAGATATAGTATACAT	59.821	37.037	5.50	0.00	0.00	2.29
91	92	7.489435	CGAGGGTGCAAAGATATAGTATACATG	59.511	40.741	5.50	0.00	0.00	3.21
92	93	8.207350	AGGGTGCAAAGATATAGTATACATGT	57.793	34.615	2.69	2.69	0.00	3.21
93	94	8.660435	AGGGTGCAAAGATATAGTATACATGTT	58.340	33.333	2.30	0.00	0.00	2.71
94	95	8.721478	GGGTGCAAAGATATAGTATACATGTTG	58.279	37.037	2.30	0.00	0.00	3.33
95	96	9.489084	GGTGCAAAGATATAGTATACATGTTGA	57.511	33.333	2.30	0.00	0.00	3.18
107	108	8.732746	AGTATACATGTTGATTCCACCTAAAC	57.267	34.615	2.30	0.00	0.00	2.01
108	109	7.773690	AGTATACATGTTGATTCCACCTAAACC	59.226	37.037	2.30	0.00	0.00	3.27
109	110	4.998051	ACATGTTGATTCCACCTAAACCT	58.002	39.130	0.00	0.00	0.00	3.50
110	111	5.393866	ACATGTTGATTCCACCTAAACCTT	58.606	37.500	0.00	0.00	0.00	3.50
111	112	5.838521	ACATGTTGATTCCACCTAAACCTTT	59.161	36.000	0.00	0.00	0.00	3.11
112	113	6.015434	ACATGTTGATTCCACCTAAACCTTTC	60.015	38.462	0.00	0.00	0.00	2.62
113	114	4.830600	TGTTGATTCCACCTAAACCTTTCC	59.169	41.667	0.00	0.00	0.00	3.13
114	115	3.681593	TGATTCCACCTAAACCTTTCCG	58.318	45.455	0.00	0.00	0.00	4.30
115	116	3.328343	TGATTCCACCTAAACCTTTCCGA	59.672	43.478	0.00	0.00	0.00	4.55
116	117	3.860968	TTCCACCTAAACCTTTCCGAA	57.139	42.857	0.00	0.00	0.00	4.30
117	118	3.412237	TCCACCTAAACCTTTCCGAAG	57.588	47.619	0.00	0.00	0.00	3.79
118	119	1.810755	CCACCTAAACCTTTCCGAAGC	59.189	52.381	0.00	0.00	0.00	3.86
119	120	2.500229	CACCTAAACCTTTCCGAAGCA	58.500	47.619	0.00	0.00	0.00	3.91
120	121	2.484264	CACCTAAACCTTTCCGAAGCAG	59.516	50.000	0.00	0.00	0.00	4.24
121	122	2.370849	ACCTAAACCTTTCCGAAGCAGA	59.629	45.455	0.00	0.00	0.00	4.26
122	123	2.742589	CCTAAACCTTTCCGAAGCAGAC	59.257	50.000	0.00	0.00	0.00	3.51
123	124	1.605753	AAACCTTTCCGAAGCAGACC	58.394	50.000	0.00	0.00	0.00	3.85
124	125	0.250770	AACCTTTCCGAAGCAGACCC	60.251	55.000	0.00	0.00	0.00	4.46
125	126	1.377333	CCTTTCCGAAGCAGACCCC	60.377	63.158	0.00	0.00	0.00	4.95
126	127	1.377333	CTTTCCGAAGCAGACCCCC	60.377	63.158	0.00	0.00	0.00	5.40
127	128	1.842381	CTTTCCGAAGCAGACCCCCT	61.842	60.000	0.00	0.00	0.00	4.79
128	129	1.838073	TTTCCGAAGCAGACCCCCTC	61.838	60.000	0.00	0.00	0.00	4.30
129	130	2.685380	CCGAAGCAGACCCCCTCT	60.685	66.667	0.00	0.00	0.00	3.69
130	131	2.294078	CCGAAGCAGACCCCCTCTT	61.294	63.158	0.00	0.00	0.00	2.85
131	132	0.976073	CCGAAGCAGACCCCCTCTTA	60.976	60.000	0.00	0.00	0.00	2.10
132	133	0.902531	CGAAGCAGACCCCCTCTTAA	59.097	55.000	0.00	0.00	0.00	1.85
133	134	1.486726	CGAAGCAGACCCCCTCTTAAT	59.513	52.381	0.00	0.00	0.00	1.40
134	135	2.698797	CGAAGCAGACCCCCTCTTAATA	59.301	50.000	0.00	0.00	0.00	0.98
135	136	3.243907	CGAAGCAGACCCCCTCTTAATAG	60.244	52.174	0.00	0.00	0.00	1.73
136	137	3.423058	AGCAGACCCCCTCTTAATAGT	57.577	47.619	0.00	0.00	0.00	2.12
137	138	4.554553	AGCAGACCCCCTCTTAATAGTA	57.445	45.455	0.00	0.00	0.00	1.82
138	139	4.224762	AGCAGACCCCCTCTTAATAGTAC	58.775	47.826	0.00	0.00	0.00	2.73
139	140	3.965347	GCAGACCCCCTCTTAATAGTACA	59.035	47.826	0.00	0.00	0.00	2.90
140	141	4.407945	GCAGACCCCCTCTTAATAGTACAA	59.592	45.833	0.00	0.00	0.00	2.41
141	142	5.071923	GCAGACCCCCTCTTAATAGTACAAT	59.928	44.000	0.00	0.00	0.00	2.71
142	143	6.525629	CAGACCCCCTCTTAATAGTACAATG	58.474	44.000	0.00	0.00	0.00	2.82
143	144	6.099845	CAGACCCCCTCTTAATAGTACAATGT	59.900	42.308	0.00	0.00	0.00	2.71
144	145	6.677076	AGACCCCCTCTTAATAGTACAATGTT	59.323	38.462	0.00	0.00	0.00	2.71
145	146	6.896883	ACCCCCTCTTAATAGTACAATGTTC	58.103	40.000	0.00	0.00	0.00	3.18
146	147	6.126565	ACCCCCTCTTAATAGTACAATGTTCC	60.127	42.308	0.00	0.00	0.00	3.62
147	148	6.101296	CCCCCTCTTAATAGTACAATGTTCCT	59.899	42.308	0.00	0.00	0.00	3.36
148	149	7.291651	CCCCCTCTTAATAGTACAATGTTCCTA	59.708	40.741	0.00	0.00	0.00	2.94
149	150	8.881262	CCCCTCTTAATAGTACAATGTTCCTAT	58.119	37.037	0.00	0.00	0.00	2.57
150	151	9.712305	CCCTCTTAATAGTACAATGTTCCTATG	57.288	37.037	0.00	0.00	0.00	2.23
160	161	8.258708	AGTACAATGTTCCTATGACTAAACTCC	58.741	37.037	0.00	0.00	0.00	3.85
161	162	6.106673	ACAATGTTCCTATGACTAAACTCCG	58.893	40.000	0.00	0.00	0.00	4.63
162	163	4.119442	TGTTCCTATGACTAAACTCCGC	57.881	45.455	0.00	0.00	0.00	5.54
163	164	3.118884	TGTTCCTATGACTAAACTCCGCC	60.119	47.826	0.00	0.00	0.00	6.13
164	165	1.679680	TCCTATGACTAAACTCCGCCG	59.320	52.381	0.00	0.00	0.00	6.46
165	166	1.679680	CCTATGACTAAACTCCGCCGA	59.320	52.381	0.00	0.00	0.00	5.54
166	167	2.100252	CCTATGACTAAACTCCGCCGAA	59.900	50.000	0.00	0.00	0.00	4.30
167	168	2.754946	ATGACTAAACTCCGCCGAAA	57.245	45.000	0.00	0.00	0.00	3.46
168	169	2.529780	TGACTAAACTCCGCCGAAAA	57.470	45.000	0.00	0.00	0.00	2.29
169	170	2.836262	TGACTAAACTCCGCCGAAAAA	58.164	42.857	0.00	0.00	0.00	1.94
170	171	2.803956	TGACTAAACTCCGCCGAAAAAG	59.196	45.455	0.00	0.00	0.00	2.27
171	172	3.062042	GACTAAACTCCGCCGAAAAAGA	58.938	45.455	0.00	0.00	0.00	2.52
172	173	3.469739	ACTAAACTCCGCCGAAAAAGAA	58.530	40.909	0.00	0.00	0.00	2.52
173	174	3.878699	ACTAAACTCCGCCGAAAAAGAAA	59.121	39.130	0.00	0.00	0.00	2.52
174	175	2.768833	AACTCCGCCGAAAAAGAAAC	57.231	45.000	0.00	0.00	0.00	2.78
175	176	0.584876	ACTCCGCCGAAAAAGAAACG	59.415	50.000	0.00	0.00	0.00	3.60
176	177	0.724785	CTCCGCCGAAAAAGAAACGC	60.725	55.000	0.00	0.00	0.00	4.84
177	178	1.009449	CCGCCGAAAAAGAAACGCA	60.009	52.632	0.00	0.00	0.00	5.24
178	179	0.592754	CCGCCGAAAAAGAAACGCAA	60.593	50.000	0.00	0.00	0.00	4.85
180	181	1.595976	CGCCGAAAAAGAAACGCAAGA	60.596	47.619	0.00	0.00	43.62	3.02
181	182	2.456010	GCCGAAAAAGAAACGCAAGAA	58.544	42.857	0.00	0.00	43.62	2.52
182	183	2.855370	GCCGAAAAAGAAACGCAAGAAA	59.145	40.909	0.00	0.00	43.62	2.52
183	184	3.304826	GCCGAAAAAGAAACGCAAGAAAA	59.695	39.130	0.00	0.00	43.62	2.29
184	185	4.777846	GCCGAAAAAGAAACGCAAGAAAAC	60.778	41.667	0.00	0.00	43.62	2.43
185	186	4.324936	CCGAAAAAGAAACGCAAGAAAACA	59.675	37.500	0.00	0.00	43.62	2.83
186	187	5.237705	CGAAAAAGAAACGCAAGAAAACAC	58.762	37.500	0.00	0.00	43.62	3.32
187	188	5.524511	AAAAAGAAACGCAAGAAAACACC	57.475	34.783	0.00	0.00	43.62	4.16
188	189	2.468532	AGAAACGCAAGAAAACACCG	57.531	45.000	0.00	0.00	43.62	4.94
189	190	1.741145	AGAAACGCAAGAAAACACCGT	59.259	42.857	0.00	0.00	43.62	4.83
190	191	2.106418	GAAACGCAAGAAAACACCGTC	58.894	47.619	0.00	0.00	43.62	4.79
191	192	1.375551	AACGCAAGAAAACACCGTCT	58.624	45.000	0.00	0.00	43.62	4.18
192	193	1.375551	ACGCAAGAAAACACCGTCTT	58.624	45.000	0.00	0.00	43.62	3.01
193	194	1.329599	ACGCAAGAAAACACCGTCTTC	59.670	47.619	0.00	0.00	43.62	2.87
194	195	1.329292	CGCAAGAAAACACCGTCTTCA	59.671	47.619	0.00	0.00	43.02	3.02
195	196	2.032030	CGCAAGAAAACACCGTCTTCAT	60.032	45.455	0.00	0.00	43.02	2.57
203	204	8.209917	AGAAAACACCGTCTTCATAAATATCC	57.790	34.615	0.00	0.00	0.00	2.59
207	208	6.516718	ACACCGTCTTCATAAATATCCAGAG	58.483	40.000	0.00	0.00	0.00	3.35
213	214	6.937465	GTCTTCATAAATATCCAGAGGGGTTC	59.063	42.308	0.00	0.00	38.11	3.62
216	217	7.219601	TCATAAATATCCAGAGGGGTTCAAA	57.780	36.000	0.00	0.00	38.11	2.69
243	244	8.988934	TCGTCTTGTGCCATAAGATAAATTATC	58.011	33.333	7.18	4.89	36.63	1.75
263	264	4.926860	TCTGAAATAGTCAATGCACACG	57.073	40.909	0.00	0.00	35.22	4.49
264	265	4.565022	TCTGAAATAGTCAATGCACACGA	58.435	39.130	0.00	0.00	35.22	4.35
268	269	7.003939	TGAAATAGTCAATGCACACGATTAG	57.996	36.000	0.00	0.00	31.51	1.73
270	271	6.589830	AATAGTCAATGCACACGATTAGTC	57.410	37.500	0.00	0.00	0.00	2.59
273	274	1.006832	AATGCACACGATTAGTCCGC	58.993	50.000	0.00	0.00	0.00	5.54
304	305	3.383185	TGTCTTCAATCACCAAAACCACC	59.617	43.478	0.00	0.00	0.00	4.61
308	309	2.697751	TCAATCACCAAAACCACCAAGG	59.302	45.455	0.00	0.00	45.67	3.61
312	313	2.024846	TCACCAAAACCACCAAGGAAGA	60.025	45.455	0.00	0.00	41.22	2.87
325	326	5.835280	CACCAAGGAAGAAATATGCCCTAAT	59.165	40.000	0.00	0.00	0.00	1.73
337	338	6.840780	ATATGCCCTAATACCTTCAAATGC	57.159	37.500	0.00	0.00	0.00	3.56
341	342	4.278419	GCCCTAATACCTTCAAATGCGAAT	59.722	41.667	0.00	0.00	0.00	3.34
357	358	9.612620	CAAATGCGAATTTTTACTTCTCTAACT	57.387	29.630	0.00	0.00	0.00	2.24
386	387	3.430453	AGGTATCAGCTAGAGATGCTCC	58.570	50.000	11.45	9.30	38.92	4.70
445	449	6.915544	TCTGTCTTATGTACGTACAGTAGG	57.084	41.667	30.15	21.24	39.92	3.18
474	478	2.767069	CTGACGAAGAACCGTACGTAG	58.233	52.381	15.21	1.90	43.49	3.51
501	509	3.304559	GCTGTAGCGAAGTGACAGTATTG	59.695	47.826	3.46	0.00	41.92	1.90
981	999	1.645704	CTCTTCTTCGTCGGCTCCGA	61.646	60.000	6.95	6.95	46.87	4.55
996	1014	2.409651	CGACTCCGAGCTAGTGCC	59.590	66.667	0.00	0.00	40.80	5.01
1189	1220	0.255890	ACTGCCCGGTAAGAATGCAT	59.744	50.000	0.00	0.00	0.00	3.96
1231	1262	4.424566	GCCACGCCATGCAACCAG	62.425	66.667	0.00	0.00	0.00	4.00
1262	1293	9.620259	AAGTTTTGTTTCTATCTCTTTGACTCT	57.380	29.630	0.00	0.00	0.00	3.24
1263	1294	9.620259	AGTTTTGTTTCTATCTCTTTGACTCTT	57.380	29.630	0.00	0.00	0.00	2.85
1292	1323	2.622942	TGCACGAGCTTCCAAGAAAAAT	59.377	40.909	6.36	0.00	42.74	1.82
1293	1324	3.818210	TGCACGAGCTTCCAAGAAAAATA	59.182	39.130	6.36	0.00	42.74	1.40
1340	1375	7.012044	AGCTATCGACACCCATTTTTAATGTAC	59.988	37.037	0.00	0.00	0.00	2.90
1362	1397	4.804139	ACATATCATCGTTCGGAACAAGAC	59.196	41.667	19.91	0.00	0.00	3.01
1363	1398	3.594603	ATCATCGTTCGGAACAAGACT	57.405	42.857	19.91	0.00	0.00	3.24
1364	1399	2.672714	TCATCGTTCGGAACAAGACTG	58.327	47.619	19.91	9.43	0.00	3.51
1407	1446	5.907207	TGCTGAATATACTGAGAAGTGGAC	58.093	41.667	0.00	0.00	0.00	4.02
1742	1785	1.219124	CCACGACTCCATGAGGGTG	59.781	63.158	0.00	9.32	37.69	4.61
1762	1866	1.906757	CGTACCAAACCATACGCGTA	58.093	50.000	22.94	22.94	37.91	4.42
1763	1867	2.257894	CGTACCAAACCATACGCGTAA	58.742	47.619	24.55	6.98	37.91	3.18
1764	1868	2.027926	CGTACCAAACCATACGCGTAAC	59.972	50.000	24.55	12.15	37.91	2.50
1779	1883	2.401063	GCGTAACTCGATGAATCTACGC	59.599	50.000	14.83	14.83	45.80	4.42
1780	1884	3.614588	CGTAACTCGATGAATCTACGCA	58.385	45.455	0.00	0.00	42.86	5.24
1781	1885	3.417969	CGTAACTCGATGAATCTACGCAC	59.582	47.826	0.00	0.00	42.86	5.34
1783	1887	2.798680	ACTCGATGAATCTACGCACAC	58.201	47.619	0.00	0.00	0.00	3.82
1785	1889	2.526077	TCGATGAATCTACGCACACAC	58.474	47.619	0.00	0.00	0.00	3.82
1787	1891	2.279921	CGATGAATCTACGCACACACAG	59.720	50.000	0.00	0.00	0.00	3.66
1818	1933	7.833786	TGTCGGTCAACTTAATTACATACTCT	58.166	34.615	0.00	0.00	0.00	3.24
1819	1934	8.959548	TGTCGGTCAACTTAATTACATACTCTA	58.040	33.333	0.00	0.00	0.00	2.43
1820	1935	9.962783	GTCGGTCAACTTAATTACATACTCTAT	57.037	33.333	0.00	0.00	0.00	1.98
2126	2241	1.663379	CGGAGGTACATCTGGCGTCA	61.663	60.000	8.51	0.00	0.00	4.35
2222	2337	1.687612	CAACTGCATGGGAGGAGGT	59.312	57.895	0.00	0.00	0.00	3.85
2336	2453	5.551233	AGGTATATGCATGCACGTAATCTT	58.449	37.500	25.37	7.00	0.00	2.40
2345	2462	1.918609	GCACGTAATCTTCAGTCGACC	59.081	52.381	13.01	0.00	0.00	4.79
2346	2463	2.670229	GCACGTAATCTTCAGTCGACCA	60.670	50.000	13.01	0.00	0.00	4.02
2347	2464	3.172050	CACGTAATCTTCAGTCGACCAG	58.828	50.000	13.01	5.53	0.00	4.00
2348	2465	2.818432	ACGTAATCTTCAGTCGACCAGT	59.182	45.455	13.01	0.00	0.00	4.00
2349	2466	3.172050	CGTAATCTTCAGTCGACCAGTG	58.828	50.000	13.01	4.25	0.00	3.66
2350	2467	3.366070	CGTAATCTTCAGTCGACCAGTGT	60.366	47.826	13.01	1.92	0.00	3.55
2351	2468	2.732412	ATCTTCAGTCGACCAGTGTG	57.268	50.000	13.01	3.43	0.00	3.82
2352	2469	1.687563	TCTTCAGTCGACCAGTGTGA	58.312	50.000	13.01	6.12	0.00	3.58
2353	2470	1.609072	TCTTCAGTCGACCAGTGTGAG	59.391	52.381	13.01	7.37	0.00	3.51
2354	2471	1.338337	CTTCAGTCGACCAGTGTGAGT	59.662	52.381	13.01	0.00	0.00	3.41
2355	2472	2.265589	TCAGTCGACCAGTGTGAGTA	57.734	50.000	13.01	0.00	0.00	2.59
2356	2473	2.152016	TCAGTCGACCAGTGTGAGTAG	58.848	52.381	13.01	0.00	0.00	2.57
2357	2474	2.152016	CAGTCGACCAGTGTGAGTAGA	58.848	52.381	13.01	0.00	0.00	2.59
2358	2475	2.160615	CAGTCGACCAGTGTGAGTAGAG	59.839	54.545	13.01	0.00	0.00	2.43
2359	2476	2.152830	GTCGACCAGTGTGAGTAGAGT	58.847	52.381	3.51	0.00	0.00	3.24
2360	2477	2.160022	GTCGACCAGTGTGAGTAGAGTC	59.840	54.545	3.51	0.00	0.00	3.36
2361	2478	2.152016	CGACCAGTGTGAGTAGAGTCA	58.848	52.381	0.00	0.00	0.00	3.41
2370	2487	4.845621	GTGAGTAGAGTCACGAGTACTC	57.154	50.000	13.18	13.18	43.06	2.59
2383	2500	1.028868	AGTACTCGGGTAGCCACGAC	61.029	60.000	12.31	3.11	35.04	4.34
2393	2528	2.522185	GTAGCCACGACTGGGGATATA	58.478	52.381	0.00	0.00	38.13	0.86
2400	2535	4.369182	CACGACTGGGGATATAAACTGTC	58.631	47.826	0.00	0.00	0.00	3.51
2426	2561	6.234920	TCGATTTTATTTCCTCCACACTTGA	58.765	36.000	0.00	0.00	0.00	3.02
2427	2562	6.371548	TCGATTTTATTTCCTCCACACTTGAG	59.628	38.462	0.00	0.00	0.00	3.02
2445	2583	8.912988	ACACTTGAGGAACAAATTAATTTCTCA	58.087	29.630	18.84	18.84	38.08	3.27
2457	2595	6.770746	ATTAATTTCTCAATCAGTGCAGCT	57.229	33.333	0.00	0.00	0.00	4.24
2459	2597	4.698583	ATTTCTCAATCAGTGCAGCTTC	57.301	40.909	0.00	0.00	0.00	3.86
2460	2598	2.845363	TCTCAATCAGTGCAGCTTCA	57.155	45.000	0.00	0.00	0.00	3.02
2461	2599	3.345508	TCTCAATCAGTGCAGCTTCAT	57.654	42.857	0.00	0.00	0.00	2.57
2462	2600	3.007635	TCTCAATCAGTGCAGCTTCATG	58.992	45.455	0.00	0.00	0.00	3.07
2463	2601	2.747989	CTCAATCAGTGCAGCTTCATGT	59.252	45.455	0.00	0.00	0.00	3.21
2464	2602	2.486592	TCAATCAGTGCAGCTTCATGTG	59.513	45.455	0.00	0.00	0.00	3.21
2465	2603	2.484742	ATCAGTGCAGCTTCATGTGA	57.515	45.000	4.33	4.33	0.00	3.58
2467	2605	1.875514	TCAGTGCAGCTTCATGTGAAC	59.124	47.619	0.00	0.00	0.00	3.18
2468	2606	1.605232	CAGTGCAGCTTCATGTGAACA	59.395	47.619	0.00	0.00	0.00	3.18
2469	2607	1.878088	AGTGCAGCTTCATGTGAACAG	59.122	47.619	0.00	0.00	0.00	3.16
2470	2608	1.605710	GTGCAGCTTCATGTGAACAGT	59.394	47.619	0.00	0.00	0.00	3.55
2471	2609	1.875514	TGCAGCTTCATGTGAACAGTC	59.124	47.619	0.00	0.00	0.00	3.51
2472	2610	1.875514	GCAGCTTCATGTGAACAGTCA	59.124	47.619	0.00	0.00	0.00	3.41
2481	2619	2.071688	GTGAACAGTCACGCATCTCT	57.928	50.000	0.00	0.00	44.58	3.10
2482	2620	3.217599	GTGAACAGTCACGCATCTCTA	57.782	47.619	0.00	0.00	44.58	2.43
2483	2621	3.175152	GTGAACAGTCACGCATCTCTAG	58.825	50.000	0.00	0.00	44.58	2.43
2484	2622	2.189342	GAACAGTCACGCATCTCTAGC	58.811	52.381	0.00	0.00	0.00	3.42
2485	2623	1.177401	ACAGTCACGCATCTCTAGCA	58.823	50.000	0.00	0.00	0.00	3.49
2486	2624	1.546029	ACAGTCACGCATCTCTAGCAA	59.454	47.619	0.00	0.00	0.00	3.91
2487	2625	2.029020	ACAGTCACGCATCTCTAGCAAA	60.029	45.455	0.00	0.00	0.00	3.68
2488	2626	3.193263	CAGTCACGCATCTCTAGCAAAT	58.807	45.455	0.00	0.00	0.00	2.32
2489	2627	4.142160	ACAGTCACGCATCTCTAGCAAATA	60.142	41.667	0.00	0.00	0.00	1.40
2490	2628	4.987285	CAGTCACGCATCTCTAGCAAATAT	59.013	41.667	0.00	0.00	0.00	1.28
2491	2629	5.118357	CAGTCACGCATCTCTAGCAAATATC	59.882	44.000	0.00	0.00	0.00	1.63
2492	2630	4.387256	GTCACGCATCTCTAGCAAATATCC	59.613	45.833	0.00	0.00	0.00	2.59
2493	2631	4.281941	TCACGCATCTCTAGCAAATATCCT	59.718	41.667	0.00	0.00	0.00	3.24
2494	2632	5.476945	TCACGCATCTCTAGCAAATATCCTA	59.523	40.000	0.00	0.00	0.00	2.94
2495	2633	5.574830	CACGCATCTCTAGCAAATATCCTAC	59.425	44.000	0.00	0.00	0.00	3.18
2496	2634	5.478679	ACGCATCTCTAGCAAATATCCTACT	59.521	40.000	0.00	0.00	0.00	2.57
2497	2635	5.804473	CGCATCTCTAGCAAATATCCTACTG	59.196	44.000	0.00	0.00	0.00	2.74
2498	2636	6.105333	GCATCTCTAGCAAATATCCTACTGG	58.895	44.000	0.00	0.00	0.00	4.00
2499	2637	6.295575	GCATCTCTAGCAAATATCCTACTGGT	60.296	42.308	0.00	0.00	34.23	4.00
2500	2638	6.902771	TCTCTAGCAAATATCCTACTGGTC	57.097	41.667	0.00	0.00	34.23	4.02
2501	2639	6.373759	TCTCTAGCAAATATCCTACTGGTCA	58.626	40.000	0.00	0.00	34.23	4.02
2502	2640	6.265649	TCTCTAGCAAATATCCTACTGGTCAC	59.734	42.308	0.00	0.00	34.23	3.67
2503	2641	5.897250	TCTAGCAAATATCCTACTGGTCACA	59.103	40.000	0.00	0.00	34.23	3.58
2504	2642	4.770795	AGCAAATATCCTACTGGTCACAC	58.229	43.478	0.00	0.00	34.23	3.82
2505	2643	3.877508	GCAAATATCCTACTGGTCACACC	59.122	47.826	0.00	0.00	39.22	4.16
2506	2644	4.384208	GCAAATATCCTACTGGTCACACCT	60.384	45.833	0.00	0.00	39.58	4.00
2507	2645	5.360591	CAAATATCCTACTGGTCACACCTC	58.639	45.833	0.00	0.00	39.58	3.85
2508	2646	2.623418	ATCCTACTGGTCACACCTCA	57.377	50.000	0.00	0.00	39.58	3.86
2509	2647	2.623418	TCCTACTGGTCACACCTCAT	57.377	50.000	0.00	0.00	39.58	2.90
2510	2648	3.750501	TCCTACTGGTCACACCTCATA	57.249	47.619	0.00	0.00	39.58	2.15
2511	2649	4.055710	TCCTACTGGTCACACCTCATAA	57.944	45.455	0.00	0.00	39.58	1.90
2512	2650	3.767673	TCCTACTGGTCACACCTCATAAC	59.232	47.826	0.00	0.00	39.58	1.89
2513	2651	3.769844	CCTACTGGTCACACCTCATAACT	59.230	47.826	0.00	0.00	39.58	2.24
2514	2652	3.963428	ACTGGTCACACCTCATAACTC	57.037	47.619	0.00	0.00	39.58	3.01
2515	2653	3.239449	ACTGGTCACACCTCATAACTCA	58.761	45.455	0.00	0.00	39.58	3.41
2516	2654	3.840666	ACTGGTCACACCTCATAACTCAT	59.159	43.478	0.00	0.00	39.58	2.90
2517	2655	5.023452	ACTGGTCACACCTCATAACTCATA	58.977	41.667	0.00	0.00	39.58	2.15
2518	2656	5.663106	ACTGGTCACACCTCATAACTCATAT	59.337	40.000	0.00	0.00	39.58	1.78
2519	2657	5.917462	TGGTCACACCTCATAACTCATATG	58.083	41.667	0.00	0.00	39.58	1.78
2520	2658	5.163311	TGGTCACACCTCATAACTCATATGG	60.163	44.000	2.13	0.00	39.58	2.74
2521	2659	4.752101	GTCACACCTCATAACTCATATGGC	59.248	45.833	2.13	0.00	41.53	4.40
2522	2660	4.655649	TCACACCTCATAACTCATATGGCT	59.344	41.667	2.13	0.00	41.53	4.75
2523	2661	5.838521	TCACACCTCATAACTCATATGGCTA	59.161	40.000	2.13	0.00	41.53	3.93
2524	2662	6.498303	TCACACCTCATAACTCATATGGCTAT	59.502	38.462	2.13	0.00	41.53	2.97
2525	2663	6.815641	CACACCTCATAACTCATATGGCTATC	59.184	42.308	2.13	0.00	41.53	2.08
2526	2664	6.070538	ACACCTCATAACTCATATGGCTATCC	60.071	42.308	2.13	0.00	41.53	2.59
2542	2680	7.997773	TGGCTATCCAGTACTACTACTAATG	57.002	40.000	0.00	0.00	37.47	1.90
2543	2681	7.524290	TGGCTATCCAGTACTACTACTAATGT	58.476	38.462	0.00	0.00	37.47	2.71
2544	2682	7.447545	TGGCTATCCAGTACTACTACTAATGTG	59.552	40.741	0.00	0.00	37.47	3.21
2545	2683	7.094291	GGCTATCCAGTACTACTACTAATGTGG	60.094	44.444	0.00	0.00	31.46	4.17
2546	2684	6.651975	ATCCAGTACTACTACTAATGTGGC	57.348	41.667	0.00	0.00	31.46	5.01
2547	2685	5.512298	TCCAGTACTACTACTAATGTGGCA	58.488	41.667	0.00	0.00	31.46	4.92
2548	2686	5.359009	TCCAGTACTACTACTAATGTGGCAC	59.641	44.000	11.55	11.55	31.46	5.01
2549	2687	5.451520	CCAGTACTACTACTAATGTGGCACC	60.452	48.000	16.26	0.00	31.46	5.01
2550	2688	5.360144	CAGTACTACTACTAATGTGGCACCT	59.640	44.000	16.26	1.43	31.46	4.00
2551	2689	4.737855	ACTACTACTAATGTGGCACCTG	57.262	45.455	16.26	5.02	0.00	4.00
2552	2690	2.403252	ACTACTAATGTGGCACCTGC	57.597	50.000	16.26	0.00	41.14	4.85
2553	2691	1.909302	ACTACTAATGTGGCACCTGCT	59.091	47.619	16.26	0.00	41.70	4.24
2554	2692	2.093447	ACTACTAATGTGGCACCTGCTC	60.093	50.000	16.26	0.00	41.70	4.26
2555	2693	0.692476	ACTAATGTGGCACCTGCTCA	59.308	50.000	16.26	0.00	41.70	4.26
2556	2694	1.283029	ACTAATGTGGCACCTGCTCAT	59.717	47.619	16.26	0.00	41.70	2.90
2557	2695	1.945394	CTAATGTGGCACCTGCTCATC	59.055	52.381	16.26	0.00	41.70	2.92
2558	2696	1.028330	AATGTGGCACCTGCTCATCG	61.028	55.000	16.26	0.00	41.70	3.84
2559	2697	3.503363	GTGGCACCTGCTCATCGC	61.503	66.667	6.29	0.00	41.70	4.58
2583	2721	9.432077	CGCAAAATAATAATTTAAAATGGCACC	57.568	29.630	0.00	0.00	34.12	5.01
2587	2725	8.675705	AATAATAATTTAAAATGGCACCTGGC	57.324	30.769	0.00	0.00	43.74	4.85
2594	2732	2.845784	TGGCACCTGGCATCACTT	59.154	55.556	0.00	0.00	46.12	3.16
2595	2733	1.153524	TGGCACCTGGCATCACTTT	59.846	52.632	0.00	0.00	46.12	2.66
2596	2734	0.469705	TGGCACCTGGCATCACTTTT	60.470	50.000	0.00	0.00	46.12	2.27
2597	2735	2.702708	TGGCACCTGGCATCACTTTTG	61.703	52.381	0.00	0.00	46.12	2.44
2598	2736	0.961019	GCACCTGGCATCACTTTTGA	59.039	50.000	0.00	0.00	43.97	2.69
2599	2737	1.340889	GCACCTGGCATCACTTTTGAA	59.659	47.619	0.00	0.00	43.97	2.69
2600	2738	2.224018	GCACCTGGCATCACTTTTGAAA	60.224	45.455	0.00	0.00	43.97	2.69
2601	2739	3.383761	CACCTGGCATCACTTTTGAAAC	58.616	45.455	0.00	0.00	34.61	2.78
2602	2740	3.068590	CACCTGGCATCACTTTTGAAACT	59.931	43.478	0.00	0.00	34.61	2.66
2603	2741	3.319122	ACCTGGCATCACTTTTGAAACTC	59.681	43.478	0.00	0.00	34.61	3.01
2604	2742	3.305608	CCTGGCATCACTTTTGAAACTCC	60.306	47.826	0.00	0.00	34.61	3.85
2605	2743	3.565307	TGGCATCACTTTTGAAACTCCT	58.435	40.909	0.00	0.00	34.61	3.69
2606	2744	4.724399	TGGCATCACTTTTGAAACTCCTA	58.276	39.130	0.00	0.00	34.61	2.94
2607	2745	5.136828	TGGCATCACTTTTGAAACTCCTAA	58.863	37.500	0.00	0.00	34.61	2.69
2608	2746	5.774690	TGGCATCACTTTTGAAACTCCTAAT	59.225	36.000	0.00	0.00	34.61	1.73
2609	2747	6.071952	TGGCATCACTTTTGAAACTCCTAATC	60.072	38.462	0.00	0.00	34.61	1.75
2610	2748	6.071952	GGCATCACTTTTGAAACTCCTAATCA	60.072	38.462	0.00	0.00	34.61	2.57
2611	2749	7.363268	GGCATCACTTTTGAAACTCCTAATCAT	60.363	37.037	0.00	0.00	34.61	2.45
2612	2750	8.031277	GCATCACTTTTGAAACTCCTAATCATT	58.969	33.333	0.00	0.00	34.61	2.57
2613	2751	9.565213	CATCACTTTTGAAACTCCTAATCATTC	57.435	33.333	0.00	0.00	34.61	2.67
2614	2752	7.806690	TCACTTTTGAAACTCCTAATCATTCG	58.193	34.615	0.00	0.00	0.00	3.34
2615	2753	7.659799	TCACTTTTGAAACTCCTAATCATTCGA	59.340	33.333	0.00	0.00	0.00	3.71
2616	2754	8.289618	CACTTTTGAAACTCCTAATCATTCGAA	58.710	33.333	0.00	0.00	0.00	3.71
2617	2755	8.290325	ACTTTTGAAACTCCTAATCATTCGAAC	58.710	33.333	0.00	0.00	0.00	3.95
2618	2756	7.737972	TTTGAAACTCCTAATCATTCGAACA	57.262	32.000	0.00	0.00	0.00	3.18
2619	2757	6.721571	TGAAACTCCTAATCATTCGAACAC	57.278	37.500	0.00	0.00	0.00	3.32
2620	2758	6.464222	TGAAACTCCTAATCATTCGAACACT	58.536	36.000	0.00	0.00	0.00	3.55
2621	2759	6.934645	TGAAACTCCTAATCATTCGAACACTT	59.065	34.615	0.00	0.00	0.00	3.16
2622	2760	7.444183	TGAAACTCCTAATCATTCGAACACTTT	59.556	33.333	0.00	0.00	0.00	2.66
2623	2761	7.745620	AACTCCTAATCATTCGAACACTTTT	57.254	32.000	0.00	0.00	0.00	2.27
2624	2762	7.133891	ACTCCTAATCATTCGAACACTTTTG	57.866	36.000	0.00	0.00	0.00	2.44
2625	2763	6.149474	ACTCCTAATCATTCGAACACTTTTGG	59.851	38.462	0.00	3.34	0.00	3.28
2626	2764	6.234920	TCCTAATCATTCGAACACTTTTGGA	58.765	36.000	0.00	5.63	0.00	3.53
2627	2765	6.712998	TCCTAATCATTCGAACACTTTTGGAA	59.287	34.615	0.00	0.00	0.00	3.53
2628	2766	7.023575	CCTAATCATTCGAACACTTTTGGAAG	58.976	38.462	0.00	0.00	38.87	3.46
2629	2767	4.223320	TCATTCGAACACTTTTGGAAGC	57.777	40.909	0.00	0.00	36.29	3.86
2630	2768	2.748461	TTCGAACACTTTTGGAAGCG	57.252	45.000	0.00	0.00	36.29	4.68
2631	2769	1.942677	TCGAACACTTTTGGAAGCGA	58.057	45.000	0.00	0.00	36.29	4.93
2632	2770	2.281517	TCGAACACTTTTGGAAGCGAA	58.718	42.857	0.00	0.00	36.29	4.70
2633	2771	2.678836	TCGAACACTTTTGGAAGCGAAA	59.321	40.909	0.00	0.00	36.29	3.46
2634	2772	3.035942	CGAACACTTTTGGAAGCGAAAG	58.964	45.455	0.00	0.00	38.50	2.62
2635	2773	3.486875	CGAACACTTTTGGAAGCGAAAGT	60.487	43.478	0.00	0.00	44.50	2.66
2636	2774	4.421058	GAACACTTTTGGAAGCGAAAGTT	58.579	39.130	0.00	0.00	42.47	2.66
2637	2775	4.028852	ACACTTTTGGAAGCGAAAGTTC	57.971	40.909	0.00	0.00	42.47	3.01
2638	2776	3.442273	ACACTTTTGGAAGCGAAAGTTCA	59.558	39.130	0.00	0.00	42.47	3.18
2639	2777	4.082463	ACACTTTTGGAAGCGAAAGTTCAA	60.082	37.500	0.00	0.00	42.47	2.69
2640	2778	4.862018	CACTTTTGGAAGCGAAAGTTCAAA	59.138	37.500	0.00	0.00	42.47	2.69
2641	2779	5.519927	CACTTTTGGAAGCGAAAGTTCAAAT	59.480	36.000	0.00	0.00	42.47	2.32
2642	2780	5.748630	ACTTTTGGAAGCGAAAGTTCAAATC	59.251	36.000	0.00	0.00	41.86	2.17
2643	2781	5.514274	TTTGGAAGCGAAAGTTCAAATCT	57.486	34.783	0.00	0.00	0.00	2.40
2644	2782	4.488126	TGGAAGCGAAAGTTCAAATCTG	57.512	40.909	0.00	0.00	0.00	2.90
2645	2783	4.133820	TGGAAGCGAAAGTTCAAATCTGA	58.866	39.130	0.00	0.00	0.00	3.27
2646	2784	4.578516	TGGAAGCGAAAGTTCAAATCTGAA	59.421	37.500	0.00	0.00	39.30	3.02
2656	2794	2.699954	TCAAATCTGAACCCTTCGAGC	58.300	47.619	0.00	0.00	0.00	5.03
2657	2795	2.038426	TCAAATCTGAACCCTTCGAGCA	59.962	45.455	0.00	0.00	0.00	4.26
2658	2796	2.100605	AATCTGAACCCTTCGAGCAC	57.899	50.000	0.00	0.00	0.00	4.40
2720	2858	3.091545	CCAAACCACAAGCATCCAGTAT	58.908	45.455	0.00	0.00	0.00	2.12
2735	2873	2.330286	CAGTATAAACACACGCCACGA	58.670	47.619	0.00	0.00	0.00	4.35
2749	2889	2.125472	ACGACACCGCAACACACA	60.125	55.556	0.00	0.00	39.95	3.72
2777	2946	1.454104	CAACACCACCCCTAGCACA	59.546	57.895	0.00	0.00	0.00	4.57
2789	2958	3.179888	TAGCACAACGGCCCCGAAA	62.180	57.895	14.44	0.00	42.83	3.46
2790	2959	2.677765	TAGCACAACGGCCCCGAAAA	62.678	55.000	14.44	0.00	42.83	2.29
2820	2989	2.309528	ACATATGACGAACCATGCGT	57.690	45.000	10.38	0.00	45.79	5.24
2832	3001	4.015406	ATGCGTTCCGAGGTGGCA	62.015	61.111	6.88	6.88	37.80	4.92
3070	3248	3.338250	ACCATGGTGACCGGGCAT	61.338	61.111	16.47	0.00	0.00	4.40
3220	3406	2.113139	CACCTTTCACGCCCCTGT	59.887	61.111	0.00	0.00	0.00	4.00

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
0	1	0.037232	GTCAGAACAGGCTAAGCGGT	60.037	55.000	0.00	0.00	0.00	5.68
1	2	0.037326	TGTCAGAACAGGCTAAGCGG	60.037	55.000	0.00	0.00	0.00	5.52
3	4	2.079925	CCTTGTCAGAACAGGCTAAGC	58.920	52.381	0.00	0.00	36.57	3.09
4	5	3.409026	ACCTTGTCAGAACAGGCTAAG	57.591	47.619	0.00	0.00	36.57	2.18
6	7	2.703536	TGAACCTTGTCAGAACAGGCTA	59.296	45.455	0.00	0.00	36.57	3.93
7	8	1.490490	TGAACCTTGTCAGAACAGGCT	59.510	47.619	0.00	0.00	36.57	4.58
8	9	1.967319	TGAACCTTGTCAGAACAGGC	58.033	50.000	0.00	0.00	36.57	4.85
9	10	3.694072	TGTTTGAACCTTGTCAGAACAGG	59.306	43.478	0.00	0.00	36.57	4.00
10	11	4.963276	TGTTTGAACCTTGTCAGAACAG	57.037	40.909	0.00	0.00	36.57	3.16
11	12	6.039270	CCTTATGTTTGAACCTTGTCAGAACA	59.961	38.462	0.00	0.00	35.26	3.18
12	13	6.262273	TCCTTATGTTTGAACCTTGTCAGAAC	59.738	38.462	0.00	0.00	0.00	3.01
13	14	6.361433	TCCTTATGTTTGAACCTTGTCAGAA	58.639	36.000	0.00	0.00	0.00	3.02
14	15	5.935945	TCCTTATGTTTGAACCTTGTCAGA	58.064	37.500	0.00	0.00	0.00	3.27
15	16	5.182001	CCTCCTTATGTTTGAACCTTGTCAG	59.818	44.000	0.00	0.00	0.00	3.51
16	17	5.070001	CCTCCTTATGTTTGAACCTTGTCA	58.930	41.667	0.00	0.00	0.00	3.58
17	18	4.459337	CCCTCCTTATGTTTGAACCTTGTC	59.541	45.833	0.00	0.00	0.00	3.18
18	19	4.105697	TCCCTCCTTATGTTTGAACCTTGT	59.894	41.667	0.00	0.00	0.00	3.16
19	20	4.459337	GTCCCTCCTTATGTTTGAACCTTG	59.541	45.833	0.00	0.00	0.00	3.61
20	21	4.105697	TGTCCCTCCTTATGTTTGAACCTT	59.894	41.667	0.00	0.00	0.00	3.50
21	22	3.655777	TGTCCCTCCTTATGTTTGAACCT	59.344	43.478	0.00	0.00	0.00	3.50
22	23	4.028993	TGTCCCTCCTTATGTTTGAACC	57.971	45.455	0.00	0.00	0.00	3.62
23	24	4.082733	GCTTGTCCCTCCTTATGTTTGAAC	60.083	45.833	0.00	0.00	0.00	3.18
24	25	4.079253	GCTTGTCCCTCCTTATGTTTGAA	58.921	43.478	0.00	0.00	0.00	2.69
25	26	3.330701	AGCTTGTCCCTCCTTATGTTTGA	59.669	43.478	0.00	0.00	0.00	2.69
26	27	3.690460	AGCTTGTCCCTCCTTATGTTTG	58.310	45.455	0.00	0.00	0.00	2.93
27	28	3.330701	TGAGCTTGTCCCTCCTTATGTTT	59.669	43.478	0.00	0.00	0.00	2.83
28	29	2.912956	TGAGCTTGTCCCTCCTTATGTT	59.087	45.455	0.00	0.00	0.00	2.71
29	30	2.551270	TGAGCTTGTCCCTCCTTATGT	58.449	47.619	0.00	0.00	0.00	2.29
30	31	3.634397	TTGAGCTTGTCCCTCCTTATG	57.366	47.619	0.00	0.00	0.00	1.90
31	32	4.228210	TCAATTGAGCTTGTCCCTCCTTAT	59.772	41.667	3.38	0.00	0.00	1.73
32	33	3.587061	TCAATTGAGCTTGTCCCTCCTTA	59.413	43.478	3.38	0.00	0.00	2.69
33	34	2.376518	TCAATTGAGCTTGTCCCTCCTT	59.623	45.455	3.38	0.00	0.00	3.36
34	35	1.988107	TCAATTGAGCTTGTCCCTCCT	59.012	47.619	3.38	0.00	0.00	3.69
35	36	2.087646	GTCAATTGAGCTTGTCCCTCC	58.912	52.381	8.80	0.00	0.00	4.30
36	37	1.734465	CGTCAATTGAGCTTGTCCCTC	59.266	52.381	8.80	0.00	0.00	4.30
37	38	1.611673	CCGTCAATTGAGCTTGTCCCT	60.612	52.381	8.80	0.00	0.00	4.20
38	39	0.804989	CCGTCAATTGAGCTTGTCCC	59.195	55.000	8.80	0.00	0.00	4.46
39	40	0.804989	CCCGTCAATTGAGCTTGTCC	59.195	55.000	8.80	0.00	0.00	4.02
40	41	1.808411	TCCCGTCAATTGAGCTTGTC	58.192	50.000	8.80	0.00	0.00	3.18
41	42	2.270352	TTCCCGTCAATTGAGCTTGT	57.730	45.000	8.80	0.00	0.00	3.16
42	43	2.813754	TCTTTCCCGTCAATTGAGCTTG	59.186	45.455	8.80	0.00	0.00	4.01
43	44	3.140325	TCTTTCCCGTCAATTGAGCTT	57.860	42.857	8.80	0.00	0.00	3.74
44	45	2.814336	GTTCTTTCCCGTCAATTGAGCT	59.186	45.455	8.80	0.00	0.00	4.09
45	46	2.412847	CGTTCTTTCCCGTCAATTGAGC	60.413	50.000	8.80	3.29	0.00	4.26
46	47	3.064207	TCGTTCTTTCCCGTCAATTGAG	58.936	45.455	8.80	3.26	0.00	3.02
47	48	3.064207	CTCGTTCTTTCCCGTCAATTGA	58.936	45.455	3.38	3.38	0.00	2.57
48	49	2.159627	CCTCGTTCTTTCCCGTCAATTG	59.840	50.000	0.00	0.00	0.00	2.32
49	50	2.423577	CCTCGTTCTTTCCCGTCAATT	58.576	47.619	0.00	0.00	0.00	2.32
50	51	1.338769	CCCTCGTTCTTTCCCGTCAAT	60.339	52.381	0.00	0.00	0.00	2.57
51	52	0.034337	CCCTCGTTCTTTCCCGTCAA	59.966	55.000	0.00	0.00	0.00	3.18
52	53	1.117142	ACCCTCGTTCTTTCCCGTCA	61.117	55.000	0.00	0.00	0.00	4.35
53	54	0.669625	CACCCTCGTTCTTTCCCGTC	60.670	60.000	0.00	0.00	0.00	4.79
54	55	1.370064	CACCCTCGTTCTTTCCCGT	59.630	57.895	0.00	0.00	0.00	5.28
55	56	2.033194	GCACCCTCGTTCTTTCCCG	61.033	63.158	0.00	0.00	0.00	5.14
56	57	0.536460	TTGCACCCTCGTTCTTTCCC	60.536	55.000	0.00	0.00	0.00	3.97
57	58	1.266989	CTTTGCACCCTCGTTCTTTCC	59.733	52.381	0.00	0.00	0.00	3.13
58	59	2.218603	TCTTTGCACCCTCGTTCTTTC	58.781	47.619	0.00	0.00	0.00	2.62
59	60	2.341846	TCTTTGCACCCTCGTTCTTT	57.658	45.000	0.00	0.00	0.00	2.52
60	61	2.568623	ATCTTTGCACCCTCGTTCTT	57.431	45.000	0.00	0.00	0.00	2.52
61	62	3.914426	ATATCTTTGCACCCTCGTTCT	57.086	42.857	0.00	0.00	0.00	3.01
62	63	4.694339	ACTATATCTTTGCACCCTCGTTC	58.306	43.478	0.00	0.00	0.00	3.95
63	64	4.755266	ACTATATCTTTGCACCCTCGTT	57.245	40.909	0.00	0.00	0.00	3.85
64	65	6.492429	TGTATACTATATCTTTGCACCCTCGT	59.508	38.462	4.17	0.00	0.00	4.18
65	66	6.920817	TGTATACTATATCTTTGCACCCTCG	58.079	40.000	4.17	0.00	0.00	4.63
66	67	8.314751	ACATGTATACTATATCTTTGCACCCTC	58.685	37.037	0.00	0.00	0.00	4.30
67	68	8.207350	ACATGTATACTATATCTTTGCACCCT	57.793	34.615	0.00	0.00	0.00	4.34
68	69	8.721478	CAACATGTATACTATATCTTTGCACCC	58.279	37.037	0.00	0.00	0.00	4.61
69	70	9.489084	TCAACATGTATACTATATCTTTGCACC	57.511	33.333	0.00	0.00	0.00	5.01
81	82	9.826574	GTTTAGGTGGAATCAACATGTATACTA	57.173	33.333	0.00	0.00	31.71	1.82
82	83	7.773690	GGTTTAGGTGGAATCAACATGTATACT	59.226	37.037	0.00	0.00	31.71	2.12
83	84	7.773690	AGGTTTAGGTGGAATCAACATGTATAC	59.226	37.037	0.00	0.00	31.71	1.47
84	85	7.867921	AGGTTTAGGTGGAATCAACATGTATA	58.132	34.615	0.00	0.00	31.71	1.47
85	86	6.731467	AGGTTTAGGTGGAATCAACATGTAT	58.269	36.000	0.00	0.00	31.71	2.29
86	87	6.134535	AGGTTTAGGTGGAATCAACATGTA	57.865	37.500	0.00	0.00	31.71	2.29
87	88	4.998051	AGGTTTAGGTGGAATCAACATGT	58.002	39.130	0.00	0.00	31.71	3.21
88	89	5.982890	AAGGTTTAGGTGGAATCAACATG	57.017	39.130	0.00	0.00	31.71	3.21
89	90	5.480422	GGAAAGGTTTAGGTGGAATCAACAT	59.520	40.000	0.00	0.00	31.71	2.71
90	91	4.830600	GGAAAGGTTTAGGTGGAATCAACA	59.169	41.667	0.00	0.00	31.71	3.33
91	92	4.082949	CGGAAAGGTTTAGGTGGAATCAAC	60.083	45.833	0.00	0.00	0.00	3.18
92	93	4.076394	CGGAAAGGTTTAGGTGGAATCAA	58.924	43.478	0.00	0.00	0.00	2.57
93	94	3.328343	TCGGAAAGGTTTAGGTGGAATCA	59.672	43.478	0.00	0.00	0.00	2.57
94	95	3.946606	TCGGAAAGGTTTAGGTGGAATC	58.053	45.455	0.00	0.00	0.00	2.52
95	96	4.332828	CTTCGGAAAGGTTTAGGTGGAAT	58.667	43.478	0.00	0.00	0.00	3.01
96	97	3.746940	CTTCGGAAAGGTTTAGGTGGAA	58.253	45.455	0.00	0.00	0.00	3.53
97	98	2.551504	GCTTCGGAAAGGTTTAGGTGGA	60.552	50.000	0.00	0.00	32.79	4.02
98	99	1.810755	GCTTCGGAAAGGTTTAGGTGG	59.189	52.381	0.00	0.00	32.79	4.61
99	100	2.484264	CTGCTTCGGAAAGGTTTAGGTG	59.516	50.000	0.00	0.00	32.79	4.00
100	101	2.370849	TCTGCTTCGGAAAGGTTTAGGT	59.629	45.455	0.00	0.00	32.79	3.08
101	102	2.742589	GTCTGCTTCGGAAAGGTTTAGG	59.257	50.000	0.00	0.00	32.79	2.69
102	103	2.742589	GGTCTGCTTCGGAAAGGTTTAG	59.257	50.000	0.00	0.00	32.79	1.85
103	104	2.551504	GGGTCTGCTTCGGAAAGGTTTA	60.552	50.000	0.00	0.00	32.79	2.01
104	105	1.605753	GGTCTGCTTCGGAAAGGTTT	58.394	50.000	0.00	0.00	32.79	3.27
105	106	0.250770	GGGTCTGCTTCGGAAAGGTT	60.251	55.000	0.00	0.00	32.79	3.50
106	107	1.375326	GGGTCTGCTTCGGAAAGGT	59.625	57.895	0.00	0.00	32.79	3.50
107	108	1.377333	GGGGTCTGCTTCGGAAAGG	60.377	63.158	0.00	0.00	32.79	3.11
108	109	1.377333	GGGGGTCTGCTTCGGAAAG	60.377	63.158	0.00	0.00	35.47	2.62
109	110	1.838073	GAGGGGGTCTGCTTCGGAAA	61.838	60.000	0.00	0.00	0.00	3.13
110	111	2.203938	AGGGGGTCTGCTTCGGAA	60.204	61.111	0.00	0.00	0.00	4.30
111	112	2.683933	GAGGGGGTCTGCTTCGGA	60.684	66.667	0.00	0.00	0.00	4.55
112	113	0.976073	TAAGAGGGGGTCTGCTTCGG	60.976	60.000	0.00	0.00	34.84	4.30
113	114	0.902531	TTAAGAGGGGGTCTGCTTCG	59.097	55.000	0.00	0.00	34.84	3.79
114	115	3.712218	ACTATTAAGAGGGGGTCTGCTTC	59.288	47.826	1.59	0.00	34.84	3.86
115	116	3.737263	ACTATTAAGAGGGGGTCTGCTT	58.263	45.455	1.59	0.00	34.84	3.91
116	117	3.423058	ACTATTAAGAGGGGGTCTGCT	57.577	47.619	1.59	0.00	34.84	4.24
117	118	3.965347	TGTACTATTAAGAGGGGGTCTGC	59.035	47.826	1.59	0.00	34.84	4.26
118	119	6.099845	ACATTGTACTATTAAGAGGGGGTCTG	59.900	42.308	1.59	0.00	34.84	3.51
119	120	6.210522	ACATTGTACTATTAAGAGGGGGTCT	58.789	40.000	1.59	0.00	36.94	3.85
120	121	6.496144	ACATTGTACTATTAAGAGGGGGTC	57.504	41.667	1.59	0.00	0.00	4.46
121	122	6.126565	GGAACATTGTACTATTAAGAGGGGGT	60.127	42.308	1.59	0.00	0.00	4.95
122	123	6.101296	AGGAACATTGTACTATTAAGAGGGGG	59.899	42.308	1.59	0.00	0.00	5.40
123	124	7.138054	AGGAACATTGTACTATTAAGAGGGG	57.862	40.000	1.59	0.00	0.00	4.79
124	125	9.712305	CATAGGAACATTGTACTATTAAGAGGG	57.288	37.037	1.59	0.00	0.00	4.30
134	135	8.258708	GGAGTTTAGTCATAGGAACATTGTACT	58.741	37.037	0.00	0.00	0.00	2.73
135	136	7.222224	CGGAGTTTAGTCATAGGAACATTGTAC	59.778	40.741	0.00	0.00	0.00	2.90
136	137	7.262772	CGGAGTTTAGTCATAGGAACATTGTA	58.737	38.462	0.00	0.00	0.00	2.41
137	138	6.106673	CGGAGTTTAGTCATAGGAACATTGT	58.893	40.000	0.00	0.00	0.00	2.71
138	139	5.006746	GCGGAGTTTAGTCATAGGAACATTG	59.993	44.000	0.00	0.00	0.00	2.82
139	140	5.116882	GCGGAGTTTAGTCATAGGAACATT	58.883	41.667	0.00	0.00	0.00	2.71
140	141	4.443034	GGCGGAGTTTAGTCATAGGAACAT	60.443	45.833	0.00	0.00	0.00	2.71
141	142	3.118884	GGCGGAGTTTAGTCATAGGAACA	60.119	47.826	0.00	0.00	0.00	3.18
142	143	3.455327	GGCGGAGTTTAGTCATAGGAAC	58.545	50.000	0.00	0.00	0.00	3.62
143	144	2.100252	CGGCGGAGTTTAGTCATAGGAA	59.900	50.000	0.00	0.00	0.00	3.36
144	145	1.679680	CGGCGGAGTTTAGTCATAGGA	59.320	52.381	0.00	0.00	0.00	2.94
145	146	1.679680	TCGGCGGAGTTTAGTCATAGG	59.320	52.381	7.21	0.00	0.00	2.57
146	147	3.431922	TTCGGCGGAGTTTAGTCATAG	57.568	47.619	7.21	0.00	0.00	2.23
147	148	3.872511	TTTCGGCGGAGTTTAGTCATA	57.127	42.857	7.21	0.00	0.00	2.15
148	149	2.754946	TTTCGGCGGAGTTTAGTCAT	57.245	45.000	7.21	0.00	0.00	3.06
149	150	2.529780	TTTTCGGCGGAGTTTAGTCA	57.470	45.000	7.21	0.00	0.00	3.41
150	151	3.062042	TCTTTTTCGGCGGAGTTTAGTC	58.938	45.455	7.21	0.00	0.00	2.59
151	152	3.116079	TCTTTTTCGGCGGAGTTTAGT	57.884	42.857	7.21	0.00	0.00	2.24
152	153	4.216731	GTTTCTTTTTCGGCGGAGTTTAG	58.783	43.478	7.21	0.00	0.00	1.85
153	154	3.303263	CGTTTCTTTTTCGGCGGAGTTTA	60.303	43.478	7.21	0.00	0.00	2.01
154	155	2.540157	CGTTTCTTTTTCGGCGGAGTTT	60.540	45.455	7.21	0.00	0.00	2.66
155	156	1.003223	CGTTTCTTTTTCGGCGGAGTT	60.003	47.619	7.21	0.00	0.00	3.01
156	157	0.584876	CGTTTCTTTTTCGGCGGAGT	59.415	50.000	7.21	0.00	0.00	3.85
157	158	0.724785	GCGTTTCTTTTTCGGCGGAG	60.725	55.000	7.21	0.36	0.00	4.63
158	159	1.280444	GCGTTTCTTTTTCGGCGGA	59.720	52.632	7.21	0.00	0.00	5.54
159	160	0.592754	TTGCGTTTCTTTTTCGGCGG	60.593	50.000	7.21	0.00	0.00	6.13
160	161	0.770008	CTTGCGTTTCTTTTTCGGCG	59.230	50.000	0.00	0.00	0.00	6.46
161	162	2.113910	TCTTGCGTTTCTTTTTCGGC	57.886	45.000	0.00	0.00	0.00	5.54
162	163	4.324936	TGTTTTCTTGCGTTTCTTTTTCGG	59.675	37.500	0.00	0.00	0.00	4.30
163	164	5.237705	GTGTTTTCTTGCGTTTCTTTTTCG	58.762	37.500	0.00	0.00	0.00	3.46
164	165	5.547341	GGTGTTTTCTTGCGTTTCTTTTTC	58.453	37.500	0.00	0.00	0.00	2.29
165	166	4.090786	CGGTGTTTTCTTGCGTTTCTTTTT	59.909	37.500	0.00	0.00	0.00	1.94
166	167	3.610677	CGGTGTTTTCTTGCGTTTCTTTT	59.389	39.130	0.00	0.00	0.00	2.27
167	168	3.175929	CGGTGTTTTCTTGCGTTTCTTT	58.824	40.909	0.00	0.00	0.00	2.52
168	169	2.162809	ACGGTGTTTTCTTGCGTTTCTT	59.837	40.909	0.00	0.00	0.00	2.52
169	170	1.741145	ACGGTGTTTTCTTGCGTTTCT	59.259	42.857	0.00	0.00	0.00	2.52
170	171	2.106418	GACGGTGTTTTCTTGCGTTTC	58.894	47.619	0.00	0.00	0.00	2.78
171	172	1.741145	AGACGGTGTTTTCTTGCGTTT	59.259	42.857	0.00	0.00	0.00	3.60
172	173	1.375551	AGACGGTGTTTTCTTGCGTT	58.624	45.000	0.00	0.00	0.00	4.84
173	174	1.329599	GAAGACGGTGTTTTCTTGCGT	59.670	47.619	0.00	0.00	32.04	5.24
174	175	1.329292	TGAAGACGGTGTTTTCTTGCG	59.671	47.619	0.00	0.00	32.04	4.85
175	176	3.626028	ATGAAGACGGTGTTTTCTTGC	57.374	42.857	0.00	0.00	32.04	4.01
176	177	9.490663	GATATTTATGAAGACGGTGTTTTCTTG	57.509	33.333	0.00	0.00	32.04	3.02
177	178	8.674607	GGATATTTATGAAGACGGTGTTTTCTT	58.325	33.333	0.00	0.00	34.68	2.52
178	179	7.827236	TGGATATTTATGAAGACGGTGTTTTCT	59.173	33.333	0.00	0.00	29.66	2.52
179	180	7.981142	TGGATATTTATGAAGACGGTGTTTTC	58.019	34.615	0.00	0.00	0.00	2.29
180	181	7.827236	TCTGGATATTTATGAAGACGGTGTTTT	59.173	33.333	0.00	0.00	0.00	2.43
181	182	7.335627	TCTGGATATTTATGAAGACGGTGTTT	58.664	34.615	0.00	0.00	0.00	2.83
182	183	6.884832	TCTGGATATTTATGAAGACGGTGTT	58.115	36.000	0.00	0.00	0.00	3.32
183	184	6.463049	CCTCTGGATATTTATGAAGACGGTGT	60.463	42.308	0.00	0.00	0.00	4.16
184	185	5.928839	CCTCTGGATATTTATGAAGACGGTG	59.071	44.000	0.00	0.00	0.00	4.94
185	186	5.012148	CCCTCTGGATATTTATGAAGACGGT	59.988	44.000	0.00	0.00	0.00	4.83
186	187	5.482908	CCCTCTGGATATTTATGAAGACGG	58.517	45.833	0.00	0.00	0.00	4.79
187	188	5.012148	ACCCCTCTGGATATTTATGAAGACG	59.988	44.000	0.00	0.00	38.00	4.18
188	189	6.441088	ACCCCTCTGGATATTTATGAAGAC	57.559	41.667	0.00	0.00	38.00	3.01
189	190	6.619437	TGAACCCCTCTGGATATTTATGAAGA	59.381	38.462	0.00	0.00	38.00	2.87
190	191	6.841601	TGAACCCCTCTGGATATTTATGAAG	58.158	40.000	0.00	0.00	38.00	3.02
191	192	6.840090	TGAACCCCTCTGGATATTTATGAA	57.160	37.500	0.00	0.00	38.00	2.57
192	193	6.840090	TTGAACCCCTCTGGATATTTATGA	57.160	37.500	0.00	0.00	38.00	2.15
193	194	7.094634	CGATTTGAACCCCTCTGGATATTTATG	60.095	40.741	0.00	0.00	38.00	1.90
194	195	6.942576	CGATTTGAACCCCTCTGGATATTTAT	59.057	38.462	0.00	0.00	38.00	1.40
195	196	6.126594	ACGATTTGAACCCCTCTGGATATTTA	60.127	38.462	0.00	0.00	38.00	1.40
203	204	2.744202	CAAGACGATTTGAACCCCTCTG	59.256	50.000	0.00	0.00	0.00	3.35
207	208	1.068541	GCACAAGACGATTTGAACCCC	60.069	52.381	9.89	0.00	0.00	4.95
243	244	4.926860	TCGTGTGCATTGACTATTTCAG	57.073	40.909	0.00	0.00	34.94	3.02
251	252	2.029244	CGGACTAATCGTGTGCATTGAC	59.971	50.000	0.00	0.00	0.00	3.18
268	269	5.087964	ATTGAAGACAATGCTTTTGCGGAC	61.088	41.667	0.00	0.00	43.90	4.79
270	271	3.319755	ATTGAAGACAATGCTTTTGCGG	58.680	40.909	0.00	0.00	43.90	5.69
273	274	5.291178	TGGTGATTGAAGACAATGCTTTTG	58.709	37.500	0.00	0.00	45.30	2.44
304	305	7.234355	AGGTATTAGGGCATATTTCTTCCTTG	58.766	38.462	0.00	0.00	0.00	3.61
308	309	8.691661	TTGAAGGTATTAGGGCATATTTCTTC	57.308	34.615	0.00	0.00	0.00	2.87
312	313	7.523709	CGCATTTGAAGGTATTAGGGCATATTT	60.524	37.037	0.00	0.00	0.00	1.40
325	326	8.573035	AGAAGTAAAAATTCGCATTTGAAGGTA	58.427	29.630	0.00	0.00	32.57	3.08
357	358	7.470702	GCATCTCTAGCTGATACCTTGAAACTA	60.471	40.741	0.00	0.00	0.00	2.24
404	405	7.865706	AGACAGAAATAATTACTGCGGAATT	57.134	32.000	0.00	1.54	35.38	2.17
445	449	2.407696	GGTTCTTCGTCAGCTTTCGTAC	59.592	50.000	7.10	0.00	0.00	3.67
474	478	1.194772	GTCACTTCGCTACAGCAAACC	59.805	52.381	1.61	0.00	42.21	3.27
501	509	7.725818	ACTACAGTTTTACTCAGGCTTAAAC	57.274	36.000	0.00	0.00	0.00	2.01
561	573	2.239751	TTGTGTTTATGCACGCATCG	57.760	45.000	7.99	0.00	41.94	3.84
562	574	4.858692	AGATTTTGTGTTTATGCACGCATC	59.141	37.500	7.99	0.00	41.94	3.91
564	576	3.980134	CAGATTTTGTGTTTATGCACGCA	59.020	39.130	0.00	0.00	41.94	5.24
565	577	3.181541	GCAGATTTTGTGTTTATGCACGC	60.182	43.478	0.00	0.00	41.94	5.34
566	578	3.364621	GGCAGATTTTGTGTTTATGCACG	59.635	43.478	0.00	0.00	41.94	5.34
567	579	4.559153	AGGCAGATTTTGTGTTTATGCAC	58.441	39.130	0.00	0.00	39.65	4.57
568	580	4.870123	AGGCAGATTTTGTGTTTATGCA	57.130	36.364	0.00	0.00	33.94	3.96
981	999	2.361357	ACGGCACTAGCTCGGAGT	60.361	61.111	6.90	0.00	41.70	3.85
996	1014	3.315191	ACACAAAACCTTCTTCCATCACG	59.685	43.478	0.00	0.00	0.00	4.35
1059	1090	0.312416	CGATGATCTCCTGGTCCGTC	59.688	60.000	0.00	0.00	0.00	4.79
1189	1220	0.531753	ATGCCGTACGTATGCATGCA	60.532	50.000	25.04	25.04	43.66	3.96
1231	1262	8.534778	CAAAGAGATAGAAACAAAACTTTGCAC	58.465	33.333	0.00	0.00	41.79	4.57
1292	1323	2.481795	GGTCGGCAGCTAACGGTATTTA	60.482	50.000	9.04	0.00	0.00	1.40
1293	1324	1.648504	GTCGGCAGCTAACGGTATTT	58.351	50.000	9.04	0.00	0.00	1.40
1340	1375	5.043903	AGTCTTGTTCCGAACGATGATATG	58.956	41.667	6.78	0.00	0.00	1.78
1351	1386	1.686587	TCTCTTGCAGTCTTGTTCCGA	59.313	47.619	0.00	0.00	0.00	4.55
1362	1397	6.538021	AGCATTACAATACTTCTCTCTTGCAG	59.462	38.462	0.00	0.00	0.00	4.41
1363	1398	6.314648	CAGCATTACAATACTTCTCTCTTGCA	59.685	38.462	0.00	0.00	0.00	4.08
1364	1399	6.536582	TCAGCATTACAATACTTCTCTCTTGC	59.463	38.462	0.00	0.00	0.00	4.01
1399	1438	2.557317	TGTCAAACTTCCGTCCACTTC	58.443	47.619	0.00	0.00	0.00	3.01
1402	1441	3.982576	AATTGTCAAACTTCCGTCCAC	57.017	42.857	0.00	0.00	0.00	4.02
1407	1446	7.582319	GCACAAATTAAAATTGTCAAACTTCCG	59.418	33.333	6.95	0.00	38.90	4.30
1422	1461	2.730404	CTGCATGCACGCACAAATTAAA	59.270	40.909	18.46	0.00	36.86	1.52
1423	1462	2.030451	TCTGCATGCACGCACAAATTAA	60.030	40.909	18.46	0.00	36.86	1.40
1424	1463	1.538950	TCTGCATGCACGCACAAATTA	59.461	42.857	18.46	0.00	36.86	1.40
1425	1464	0.314618	TCTGCATGCACGCACAAATT	59.685	45.000	18.46	0.00	36.86	1.82
1426	1465	0.387622	GTCTGCATGCACGCACAAAT	60.388	50.000	18.46	0.00	36.86	2.32
1715	1758	2.741092	GAGTCGTGGGGCTTGTGA	59.259	61.111	0.00	0.00	0.00	3.58
1755	1859	3.957671	AGATTCATCGAGTTACGCGTA	57.042	42.857	16.41	16.41	42.26	4.42
1762	1866	3.179830	GTGTGCGTAGATTCATCGAGTT	58.820	45.455	0.00	0.00	0.00	3.01
1763	1867	2.163613	TGTGTGCGTAGATTCATCGAGT	59.836	45.455	0.00	0.00	0.00	4.18
1764	1868	2.531912	GTGTGTGCGTAGATTCATCGAG	59.468	50.000	0.00	0.00	0.00	4.04
1779	1883	1.643292	CGACAACCAGCTGTGTGTG	59.357	57.895	20.70	15.49	0.00	3.82
1780	1884	1.523711	CCGACAACCAGCTGTGTGT	60.524	57.895	14.16	15.64	0.00	3.72
1781	1885	1.498865	GACCGACAACCAGCTGTGTG	61.499	60.000	14.16	12.65	0.00	3.82
1783	1887	0.813610	TTGACCGACAACCAGCTGTG	60.814	55.000	13.81	7.93	33.18	3.66
1785	1889	4.454948	TTGACCGACAACCAGCTG	57.545	55.556	6.78	6.78	33.18	4.24
1818	1933	6.069905	TCCAGCTGTACCCAACATAAGAAATA	60.070	38.462	13.81	0.00	37.50	1.40
1819	1934	4.949856	CCAGCTGTACCCAACATAAGAAAT	59.050	41.667	13.81	0.00	37.50	2.17
1820	1935	4.042311	TCCAGCTGTACCCAACATAAGAAA	59.958	41.667	13.81	0.00	37.50	2.52
1822	1937	3.055385	GTCCAGCTGTACCCAACATAAGA	60.055	47.826	13.81	0.00	37.50	2.10
1823	1938	3.270877	GTCCAGCTGTACCCAACATAAG	58.729	50.000	13.81	0.00	37.50	1.73
1824	1939	2.354303	CGTCCAGCTGTACCCAACATAA	60.354	50.000	13.81	0.00	37.50	1.90
1835	1950	2.524394	ACCCAGTCGTCCAGCTGT	60.524	61.111	13.81	0.00	0.00	4.40
2117	2232	2.917227	TCCAGCACTGACGCCAGA	60.917	61.111	5.48	0.00	43.02	3.86
2126	2241	2.027377	CCTCTTGATGTTCTCCAGCACT	60.027	50.000	0.00	0.00	39.66	4.40
2336	2453	2.152016	CTACTCACACTGGTCGACTGA	58.848	52.381	16.46	9.78	0.00	3.41
2345	2462	2.809119	ACTCGTGACTCTACTCACACTG	59.191	50.000	0.00	0.00	40.67	3.66
2346	2463	3.128852	ACTCGTGACTCTACTCACACT	57.871	47.619	0.00	0.00	40.67	3.55
2347	2464	3.995705	AGTACTCGTGACTCTACTCACAC	59.004	47.826	0.00	0.00	40.67	3.82
2348	2465	4.244066	GAGTACTCGTGACTCTACTCACA	58.756	47.826	7.22	0.00	40.67	3.58
2349	2466	3.304026	CGAGTACTCGTGACTCTACTCAC	59.696	52.174	32.24	0.00	46.99	3.51
2350	2467	3.509740	CGAGTACTCGTGACTCTACTCA	58.490	50.000	32.24	0.00	46.99	3.41
2363	2480	0.745845	TCGTGGCTACCCGAGTACTC	60.746	60.000	13.18	13.18	0.00	2.59
2364	2481	1.028868	GTCGTGGCTACCCGAGTACT	61.029	60.000	0.00	0.00	33.10	2.73
2365	2482	1.028868	AGTCGTGGCTACCCGAGTAC	61.029	60.000	0.00	0.00	35.14	2.73
2366	2483	1.028330	CAGTCGTGGCTACCCGAGTA	61.028	60.000	0.00	0.00	35.14	2.59
2367	2484	2.035312	AGTCGTGGCTACCCGAGT	59.965	61.111	0.00	0.00	33.10	4.18
2368	2485	2.490217	CAGTCGTGGCTACCCGAG	59.510	66.667	0.00	0.00	33.10	4.63
2369	2486	3.066190	CCAGTCGTGGCTACCCGA	61.066	66.667	0.00	0.00	36.89	5.14
2370	2487	4.143333	CCCAGTCGTGGCTACCCG	62.143	72.222	0.00	0.00	43.44	5.28
2371	2488	3.782443	CCCCAGTCGTGGCTACCC	61.782	72.222	0.00	0.00	43.44	3.69
2383	2500	5.468540	TCGATGACAGTTTATATCCCCAG	57.531	43.478	0.00	0.00	0.00	4.45
2393	2528	7.393234	TGGAGGAAATAAAATCGATGACAGTTT	59.607	33.333	0.00	0.00	0.00	2.66
2400	2535	6.683974	AGTGTGGAGGAAATAAAATCGATG	57.316	37.500	0.00	0.00	0.00	3.84
2426	2561	9.918630	CACTGATTGAGAAATTAATTTGTTCCT	57.081	29.630	17.98	8.64	0.00	3.36
2427	2562	8.650714	GCACTGATTGAGAAATTAATTTGTTCC	58.349	33.333	17.98	3.92	0.00	3.62
2434	2569	6.770746	AGCTGCACTGATTGAGAAATTAAT	57.229	33.333	1.02	0.00	0.00	1.40
2445	2583	2.786777	TCACATGAAGCTGCACTGATT	58.213	42.857	0.00	0.00	0.00	2.57
2463	2601	2.416027	GCTAGAGATGCGTGACTGTTCA	60.416	50.000	0.00	0.00	0.00	3.18
2464	2602	2.189342	GCTAGAGATGCGTGACTGTTC	58.811	52.381	0.00	0.00	0.00	3.18
2465	2603	1.546029	TGCTAGAGATGCGTGACTGTT	59.454	47.619	0.00	0.00	0.00	3.16
2467	2605	2.284263	TTGCTAGAGATGCGTGACTG	57.716	50.000	0.00	0.00	0.00	3.51
2468	2606	3.533606	ATTTGCTAGAGATGCGTGACT	57.466	42.857	0.00	0.00	0.00	3.41
2469	2607	4.387256	GGATATTTGCTAGAGATGCGTGAC	59.613	45.833	0.00	0.00	0.00	3.67
2470	2608	4.281941	AGGATATTTGCTAGAGATGCGTGA	59.718	41.667	0.00	0.00	0.00	4.35
2471	2609	4.564041	AGGATATTTGCTAGAGATGCGTG	58.436	43.478	0.00	0.00	0.00	5.34
2472	2610	4.881019	AGGATATTTGCTAGAGATGCGT	57.119	40.909	0.00	0.00	0.00	5.24
2473	2611	5.804473	CAGTAGGATATTTGCTAGAGATGCG	59.196	44.000	0.00	0.00	0.00	4.73
2474	2612	6.105333	CCAGTAGGATATTTGCTAGAGATGC	58.895	44.000	0.00	0.00	36.89	3.91
2475	2613	7.039434	TGACCAGTAGGATATTTGCTAGAGATG	60.039	40.741	0.00	0.00	38.69	2.90
2476	2614	7.013220	TGACCAGTAGGATATTTGCTAGAGAT	58.987	38.462	0.00	0.00	38.69	2.75
2477	2615	6.265649	GTGACCAGTAGGATATTTGCTAGAGA	59.734	42.308	0.00	0.00	38.69	3.10
2478	2616	6.040955	TGTGACCAGTAGGATATTTGCTAGAG	59.959	42.308	0.00	0.00	38.69	2.43
2479	2617	5.897250	TGTGACCAGTAGGATATTTGCTAGA	59.103	40.000	0.00	0.00	38.69	2.43
2480	2618	5.986135	GTGTGACCAGTAGGATATTTGCTAG	59.014	44.000	0.00	0.00	38.69	3.42
2481	2619	5.163343	GGTGTGACCAGTAGGATATTTGCTA	60.163	44.000	0.00	0.00	38.42	3.49
2482	2620	4.384208	GGTGTGACCAGTAGGATATTTGCT	60.384	45.833	0.00	0.00	38.42	3.91
2483	2621	3.877508	GGTGTGACCAGTAGGATATTTGC	59.122	47.826	0.00	0.00	38.42	3.68
2484	2622	5.104941	TGAGGTGTGACCAGTAGGATATTTG	60.105	44.000	0.00	0.00	41.95	2.32
2485	2623	5.030147	TGAGGTGTGACCAGTAGGATATTT	58.970	41.667	0.00	0.00	41.95	1.40
2486	2624	4.620723	TGAGGTGTGACCAGTAGGATATT	58.379	43.478	0.00	0.00	41.95	1.28
2487	2625	4.265856	TGAGGTGTGACCAGTAGGATAT	57.734	45.455	0.00	0.00	41.95	1.63
2488	2626	3.750501	TGAGGTGTGACCAGTAGGATA	57.249	47.619	0.00	0.00	41.95	2.59
2489	2627	2.623418	TGAGGTGTGACCAGTAGGAT	57.377	50.000	0.00	0.00	41.95	3.24
2490	2628	2.623418	ATGAGGTGTGACCAGTAGGA	57.377	50.000	0.00	0.00	41.95	2.94
2491	2629	3.769844	AGTTATGAGGTGTGACCAGTAGG	59.230	47.826	0.00	0.00	41.95	3.18
2492	2630	4.462834	TGAGTTATGAGGTGTGACCAGTAG	59.537	45.833	0.00	0.00	41.95	2.57
2493	2631	4.412843	TGAGTTATGAGGTGTGACCAGTA	58.587	43.478	0.00	0.00	41.95	2.74
2494	2632	3.239449	TGAGTTATGAGGTGTGACCAGT	58.761	45.455	0.00	0.00	41.95	4.00
2495	2633	3.961480	TGAGTTATGAGGTGTGACCAG	57.039	47.619	0.00	0.00	41.95	4.00
2496	2634	5.163311	CCATATGAGTTATGAGGTGTGACCA	60.163	44.000	3.65	0.00	40.22	4.02
2497	2635	5.300752	CCATATGAGTTATGAGGTGTGACC	58.699	45.833	3.65	0.00	40.22	4.02
2498	2636	4.752101	GCCATATGAGTTATGAGGTGTGAC	59.248	45.833	3.65	0.00	40.22	3.67
2499	2637	4.655649	AGCCATATGAGTTATGAGGTGTGA	59.344	41.667	3.65	0.00	40.22	3.58
2500	2638	4.965814	AGCCATATGAGTTATGAGGTGTG	58.034	43.478	3.65	0.00	40.22	3.82
2501	2639	6.070538	GGATAGCCATATGAGTTATGAGGTGT	60.071	42.308	3.65	0.00	40.22	4.16
2502	2640	6.070596	TGGATAGCCATATGAGTTATGAGGTG	60.071	42.308	3.65	0.00	40.22	4.00
2503	2641	6.025539	TGGATAGCCATATGAGTTATGAGGT	58.974	40.000	3.65	0.00	40.22	3.85
2504	2642	6.155910	ACTGGATAGCCATATGAGTTATGAGG	59.844	42.308	0.00	0.00	44.91	3.86
2505	2643	7.180322	ACTGGATAGCCATATGAGTTATGAG	57.820	40.000	0.00	4.05	44.91	2.90
2506	2644	7.895962	AGTACTGGATAGCCATATGAGTTATGA	59.104	37.037	0.00	0.00	44.91	2.15
2507	2645	8.072321	AGTACTGGATAGCCATATGAGTTATG	57.928	38.462	0.00	0.00	44.91	1.90
2508	2646	9.191479	GTAGTACTGGATAGCCATATGAGTTAT	57.809	37.037	5.39	2.56	44.91	1.89
2509	2647	8.391699	AGTAGTACTGGATAGCCATATGAGTTA	58.608	37.037	5.39	0.00	44.91	2.24
2510	2648	7.242359	AGTAGTACTGGATAGCCATATGAGTT	58.758	38.462	5.39	0.00	44.91	3.01
2511	2649	6.795590	AGTAGTACTGGATAGCCATATGAGT	58.204	40.000	5.39	0.00	44.91	3.41
2512	2650	8.050325	AGTAGTAGTACTGGATAGCCATATGAG	58.950	40.741	13.29	0.00	44.91	2.90
2513	2651	7.929959	AGTAGTAGTACTGGATAGCCATATGA	58.070	38.462	13.29	0.00	44.91	2.15
2514	2652	9.682465	TTAGTAGTAGTACTGGATAGCCATATG	57.318	37.037	18.75	0.00	44.91	1.78
2516	2654	9.682465	CATTAGTAGTAGTACTGGATAGCCATA	57.318	37.037	18.75	0.00	44.91	2.74
2517	2655	8.171400	ACATTAGTAGTAGTACTGGATAGCCAT	58.829	37.037	18.75	0.00	44.91	4.40
2518	2656	7.447545	CACATTAGTAGTAGTACTGGATAGCCA	59.552	40.741	18.75	0.00	39.96	4.75
2519	2657	7.094291	CCACATTAGTAGTAGTACTGGATAGCC	60.094	44.444	18.75	0.00	39.96	3.93
2520	2658	7.575343	GCCACATTAGTAGTAGTACTGGATAGC	60.575	44.444	18.75	11.14	39.96	2.97
2521	2659	7.447545	TGCCACATTAGTAGTAGTACTGGATAG	59.552	40.741	18.75	7.84	39.96	2.08
2522	2660	7.230108	GTGCCACATTAGTAGTAGTACTGGATA	59.770	40.741	18.75	3.93	39.96	2.59
2523	2661	6.040616	GTGCCACATTAGTAGTAGTACTGGAT	59.959	42.308	18.75	10.50	39.96	3.41
2524	2662	5.359009	GTGCCACATTAGTAGTAGTACTGGA	59.641	44.000	18.75	8.82	39.96	3.86
2525	2663	5.451520	GGTGCCACATTAGTAGTAGTACTGG	60.452	48.000	18.75	12.98	39.96	4.00
2526	2664	5.360144	AGGTGCCACATTAGTAGTAGTACTG	59.640	44.000	18.75	7.12	39.96	2.74
2527	2665	5.360144	CAGGTGCCACATTAGTAGTAGTACT	59.640	44.000	14.57	14.57	42.49	2.73
2528	2666	5.589192	CAGGTGCCACATTAGTAGTAGTAC	58.411	45.833	0.00	0.00	0.00	2.73
2529	2667	4.098960	GCAGGTGCCACATTAGTAGTAGTA	59.901	45.833	0.00	0.00	34.31	1.82
2530	2668	3.118738	GCAGGTGCCACATTAGTAGTAGT	60.119	47.826	0.00	0.00	34.31	2.73
2531	2669	3.133003	AGCAGGTGCCACATTAGTAGTAG	59.867	47.826	0.00	0.00	43.38	2.57
2532	2670	3.104512	AGCAGGTGCCACATTAGTAGTA	58.895	45.455	0.00	0.00	43.38	1.82
2533	2671	1.909302	AGCAGGTGCCACATTAGTAGT	59.091	47.619	0.00	0.00	43.38	2.73
2534	2672	2.093500	TGAGCAGGTGCCACATTAGTAG	60.093	50.000	0.00	0.00	43.38	2.57
2535	2673	1.905894	TGAGCAGGTGCCACATTAGTA	59.094	47.619	0.00	0.00	43.38	1.82
2536	2674	0.692476	TGAGCAGGTGCCACATTAGT	59.308	50.000	0.00	0.00	43.38	2.24
2537	2675	1.945394	GATGAGCAGGTGCCACATTAG	59.055	52.381	11.67	0.00	43.38	1.73
2538	2676	1.743431	CGATGAGCAGGTGCCACATTA	60.743	52.381	11.67	0.00	43.38	1.90
2539	2677	1.028330	CGATGAGCAGGTGCCACATT	61.028	55.000	11.67	0.00	43.38	2.71
2540	2678	1.450848	CGATGAGCAGGTGCCACAT	60.451	57.895	10.62	10.62	43.38	3.21
2541	2679	2.046988	CGATGAGCAGGTGCCACA	60.047	61.111	0.00	0.15	43.38	4.17
2557	2695	9.432077	GGTGCCATTTTAAATTATTATTTTGCG	57.568	29.630	0.00	0.00	35.61	4.85
2561	2699	9.119418	GCCAGGTGCCATTTTAAATTATTATTT	57.881	29.630	0.00	0.00	37.68	1.40
2562	2700	8.270744	TGCCAGGTGCCATTTTAAATTATTATT	58.729	29.630	0.00	0.00	40.16	1.40
2563	2701	7.800092	TGCCAGGTGCCATTTTAAATTATTAT	58.200	30.769	0.00	0.00	40.16	1.28
2564	2702	7.187824	TGCCAGGTGCCATTTTAAATTATTA	57.812	32.000	0.00	0.00	40.16	0.98
2565	2703	6.059787	TGCCAGGTGCCATTTTAAATTATT	57.940	33.333	0.00	0.00	40.16	1.40
2566	2704	5.690464	TGCCAGGTGCCATTTTAAATTAT	57.310	34.783	0.00	0.00	40.16	1.28
2567	2705	5.188555	TGATGCCAGGTGCCATTTTAAATTA	59.811	36.000	0.00	0.00	40.16	1.40
2568	2706	4.019501	TGATGCCAGGTGCCATTTTAAATT	60.020	37.500	0.00	0.00	40.16	1.82
2569	2707	3.518705	TGATGCCAGGTGCCATTTTAAAT	59.481	39.130	0.00	0.00	40.16	1.40
2570	2708	2.902486	TGATGCCAGGTGCCATTTTAAA	59.098	40.909	0.00	0.00	40.16	1.52
2571	2709	2.233431	GTGATGCCAGGTGCCATTTTAA	59.767	45.455	0.00	0.00	40.16	1.52
2572	2710	1.824230	GTGATGCCAGGTGCCATTTTA	59.176	47.619	0.00	0.00	40.16	1.52
2573	2711	0.609662	GTGATGCCAGGTGCCATTTT	59.390	50.000	0.00	0.00	40.16	1.82
2574	2712	0.251922	AGTGATGCCAGGTGCCATTT	60.252	50.000	0.00	0.00	40.16	2.32
2575	2713	0.251922	AAGTGATGCCAGGTGCCATT	60.252	50.000	0.00	0.00	40.16	3.16
2576	2714	0.251922	AAAGTGATGCCAGGTGCCAT	60.252	50.000	0.00	0.00	40.16	4.40
2577	2715	0.469705	AAAAGTGATGCCAGGTGCCA	60.470	50.000	0.00	0.00	40.16	4.92
2578	2716	0.037975	CAAAAGTGATGCCAGGTGCC	60.038	55.000	0.00	0.00	40.16	5.01
2579	2717	0.961019	TCAAAAGTGATGCCAGGTGC	59.039	50.000	0.00	0.00	41.77	5.01
2580	2718	3.068590	AGTTTCAAAAGTGATGCCAGGTG	59.931	43.478	0.00	0.00	32.48	4.00
2581	2719	3.299503	AGTTTCAAAAGTGATGCCAGGT	58.700	40.909	0.00	0.00	32.48	4.00
2582	2720	3.305608	GGAGTTTCAAAAGTGATGCCAGG	60.306	47.826	0.00	0.00	32.48	4.45
2583	2721	3.571401	AGGAGTTTCAAAAGTGATGCCAG	59.429	43.478	0.00	0.00	32.48	4.85
2584	2722	3.565307	AGGAGTTTCAAAAGTGATGCCA	58.435	40.909	0.00	0.00	32.48	4.92
2585	2723	5.705609	TTAGGAGTTTCAAAAGTGATGCC	57.294	39.130	0.00	0.00	32.48	4.40
2586	2724	6.913170	TGATTAGGAGTTTCAAAAGTGATGC	58.087	36.000	0.00	0.00	32.48	3.91
2587	2725	9.565213	GAATGATTAGGAGTTTCAAAAGTGATG	57.435	33.333	0.00	0.00	32.48	3.07
2588	2726	8.454106	CGAATGATTAGGAGTTTCAAAAGTGAT	58.546	33.333	0.00	0.00	32.48	3.06
2589	2727	7.659799	TCGAATGATTAGGAGTTTCAAAAGTGA	59.340	33.333	0.00	0.00	0.00	3.41
2590	2728	7.806690	TCGAATGATTAGGAGTTTCAAAAGTG	58.193	34.615	0.00	0.00	0.00	3.16
2591	2729	7.979444	TCGAATGATTAGGAGTTTCAAAAGT	57.021	32.000	0.00	0.00	0.00	2.66
2592	2730	8.289618	TGTTCGAATGATTAGGAGTTTCAAAAG	58.710	33.333	0.00	0.00	0.00	2.27
2593	2731	8.073768	GTGTTCGAATGATTAGGAGTTTCAAAA	58.926	33.333	0.00	0.00	0.00	2.44
2594	2732	7.444183	AGTGTTCGAATGATTAGGAGTTTCAAA	59.556	33.333	0.00	0.00	0.00	2.69
2595	2733	6.934645	AGTGTTCGAATGATTAGGAGTTTCAA	59.065	34.615	0.00	0.00	0.00	2.69
2596	2734	6.464222	AGTGTTCGAATGATTAGGAGTTTCA	58.536	36.000	0.00	0.00	0.00	2.69
2597	2735	6.969828	AGTGTTCGAATGATTAGGAGTTTC	57.030	37.500	0.00	0.00	0.00	2.78
2598	2736	7.745620	AAAGTGTTCGAATGATTAGGAGTTT	57.254	32.000	0.00	0.00	0.00	2.66
2599	2737	7.308589	CCAAAAGTGTTCGAATGATTAGGAGTT	60.309	37.037	0.00	0.00	0.00	3.01
2600	2738	6.149474	CCAAAAGTGTTCGAATGATTAGGAGT	59.851	38.462	0.00	0.00	0.00	3.85
2601	2739	6.371548	TCCAAAAGTGTTCGAATGATTAGGAG	59.628	38.462	0.00	0.00	0.00	3.69
2602	2740	6.234920	TCCAAAAGTGTTCGAATGATTAGGA	58.765	36.000	0.00	1.63	0.00	2.94
2603	2741	6.494893	TCCAAAAGTGTTCGAATGATTAGG	57.505	37.500	0.00	0.00	0.00	2.69
2604	2742	6.524586	GCTTCCAAAAGTGTTCGAATGATTAG	59.475	38.462	0.00	0.00	34.79	1.73
2605	2743	6.378582	GCTTCCAAAAGTGTTCGAATGATTA	58.621	36.000	0.00	0.00	34.79	1.75
2606	2744	5.222631	GCTTCCAAAAGTGTTCGAATGATT	58.777	37.500	0.00	0.00	34.79	2.57
2607	2745	4.613622	CGCTTCCAAAAGTGTTCGAATGAT	60.614	41.667	0.00	0.00	38.05	2.45
2608	2746	3.303725	CGCTTCCAAAAGTGTTCGAATGA	60.304	43.478	0.00	0.00	38.05	2.57
2609	2747	2.973224	CGCTTCCAAAAGTGTTCGAATG	59.027	45.455	0.00	0.00	38.05	2.67
2610	2748	2.875933	TCGCTTCCAAAAGTGTTCGAAT	59.124	40.909	0.00	0.00	42.46	3.34
2611	2749	2.281517	TCGCTTCCAAAAGTGTTCGAA	58.718	42.857	0.00	0.00	42.46	3.71
2612	2750	1.942677	TCGCTTCCAAAAGTGTTCGA	58.057	45.000	0.00	0.00	42.46	3.71
2613	2751	2.748461	TTCGCTTCCAAAAGTGTTCG	57.252	45.000	0.00	0.00	42.46	3.95
2614	2752	4.028852	ACTTTCGCTTCCAAAAGTGTTC	57.971	40.909	0.05	0.00	42.52	3.18
2615	2753	4.082463	TGAACTTTCGCTTCCAAAAGTGTT	60.082	37.500	1.62	0.00	43.14	3.32
2616	2754	3.442273	TGAACTTTCGCTTCCAAAAGTGT	59.558	39.130	1.62	0.00	43.14	3.55
2617	2755	4.027572	TGAACTTTCGCTTCCAAAAGTG	57.972	40.909	1.62	0.00	43.14	3.16
2618	2756	4.712122	TTGAACTTTCGCTTCCAAAAGT	57.288	36.364	0.00	0.00	45.21	2.66
2619	2757	5.979517	AGATTTGAACTTTCGCTTCCAAAAG	59.020	36.000	0.00	0.00	38.24	2.27
2620	2758	5.748152	CAGATTTGAACTTTCGCTTCCAAAA	59.252	36.000	0.00	0.00	0.00	2.44
2621	2759	5.067153	TCAGATTTGAACTTTCGCTTCCAAA	59.933	36.000	0.00	0.00	0.00	3.28
2622	2760	4.578516	TCAGATTTGAACTTTCGCTTCCAA	59.421	37.500	0.00	0.00	0.00	3.53
2623	2761	4.133820	TCAGATTTGAACTTTCGCTTCCA	58.866	39.130	0.00	0.00	0.00	3.53
2624	2762	4.749245	TCAGATTTGAACTTTCGCTTCC	57.251	40.909	0.00	0.00	0.00	3.46
2635	2773	3.074412	GCTCGAAGGGTTCAGATTTGAA	58.926	45.455	0.00	0.00	40.92	2.69
2636	2774	2.038426	TGCTCGAAGGGTTCAGATTTGA	59.962	45.455	0.00	0.00	0.00	2.69
2637	2775	2.160417	GTGCTCGAAGGGTTCAGATTTG	59.840	50.000	0.00	0.00	0.00	2.32
2638	2776	2.039084	AGTGCTCGAAGGGTTCAGATTT	59.961	45.455	0.00	0.00	0.00	2.17
2639	2777	1.625818	AGTGCTCGAAGGGTTCAGATT	59.374	47.619	0.00	0.00	0.00	2.40
2640	2778	1.270907	AGTGCTCGAAGGGTTCAGAT	58.729	50.000	0.00	0.00	0.00	2.90
2641	2779	1.048601	AAGTGCTCGAAGGGTTCAGA	58.951	50.000	0.00	0.00	0.00	3.27
2642	2780	2.338500	GTAAGTGCTCGAAGGGTTCAG	58.662	52.381	0.00	0.00	0.00	3.02
2643	2781	1.001633	GGTAAGTGCTCGAAGGGTTCA	59.998	52.381	0.00	0.00	0.00	3.18
2644	2782	1.723220	GGTAAGTGCTCGAAGGGTTC	58.277	55.000	0.00	0.00	0.00	3.62
2645	2783	0.037605	CGGTAAGTGCTCGAAGGGTT	60.038	55.000	0.00	0.00	0.00	4.11
2646	2784	0.896940	TCGGTAAGTGCTCGAAGGGT	60.897	55.000	0.00	0.00	0.00	4.34
2647	2785	0.245539	TTCGGTAAGTGCTCGAAGGG	59.754	55.000	0.00	0.00	37.88	3.95
2648	2786	2.074547	TTTCGGTAAGTGCTCGAAGG	57.925	50.000	0.00	0.00	42.55	3.46
2649	2787	3.120649	CCTTTTTCGGTAAGTGCTCGAAG	60.121	47.826	0.00	0.00	42.55	3.79
2650	2788	2.803956	CCTTTTTCGGTAAGTGCTCGAA	59.196	45.455	0.00	0.00	40.47	3.71
2651	2789	2.409975	CCTTTTTCGGTAAGTGCTCGA	58.590	47.619	0.00	0.00	0.00	4.04
2652	2790	1.136057	GCCTTTTTCGGTAAGTGCTCG	60.136	52.381	0.00	0.00	0.00	5.03
2653	2791	2.152016	AGCCTTTTTCGGTAAGTGCTC	58.848	47.619	0.00	0.00	29.18	4.26
2654	2792	2.271944	AGCCTTTTTCGGTAAGTGCT	57.728	45.000	0.00	0.00	0.00	4.40
2655	2793	3.305964	GAAAGCCTTTTTCGGTAAGTGC	58.694	45.455	0.00	0.00	0.00	4.40
2656	2794	3.551551	CGAAAGCCTTTTTCGGTAAGTG	58.448	45.455	12.72	0.00	45.17	3.16
2657	2795	3.891056	CGAAAGCCTTTTTCGGTAAGT	57.109	42.857	12.72	0.00	45.17	2.24
2720	2858	1.152989	GGTGTCGTGGCGTGTGTTTA	61.153	55.000	0.00	0.00	0.00	2.01
2735	2873	2.745785	CGTGTGTGTGTTGCGGTGT	61.746	57.895	0.00	0.00	0.00	4.16
2777	2946	2.196502	ACCTTTTTCGGGGCCGTT	59.803	55.556	0.00	0.00	40.74	4.44
2789	2958	6.331061	GTTCGTCATATGTAGTCTCACCTTT	58.669	40.000	1.90	0.00	0.00	3.11
2790	2959	5.163540	GGTTCGTCATATGTAGTCTCACCTT	60.164	44.000	1.90	0.00	0.00	3.50
2832	3001	4.459685	CGATATCGTATCCTTCCTGAAGGT	59.540	45.833	22.03	13.59	44.88	3.50
2866	3035	1.301009	GATCCTTGGATCGGGCGAC	60.301	63.158	13.16	0.00	0.00	5.19
3070	3248	4.329545	GAGCCCGTGCCTTGGTGA	62.330	66.667	0.00	0.00	38.69	4.02
3175	3361	0.386858	CCGCTCGTCTCTTTCGTTGA	60.387	55.000	0.00	0.00	0.00	3.18

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.