Multiple sequence alignment - TraesCS3B01G193800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G193800 chr3B 100.000 2906 0 0 1 2906 214014584 214017489 0.000000e+00 5367.0
1 TraesCS3B01G193800 chr3B 98.732 1025 13 0 1882 2906 214027731 214028755 0.000000e+00 1821.0
2 TraesCS3B01G193800 chr3B 89.913 1031 92 11 1882 2906 555919053 555920077 0.000000e+00 1317.0
3 TraesCS3B01G193800 chr3B 91.765 935 74 3 958 1891 214266716 214267648 0.000000e+00 1297.0
4 TraesCS3B01G193800 chr3B 89.535 1032 96 11 1881 2906 555906193 555907218 0.000000e+00 1297.0
5 TraesCS3B01G193800 chr5B 94.937 1027 47 4 1882 2906 523271202 523272225 0.000000e+00 1604.0
6 TraesCS3B01G193800 chr5B 94.450 1027 53 3 1882 2906 523331636 523332660 0.000000e+00 1578.0
7 TraesCS3B01G193800 chr7B 91.895 1024 76 7 1882 2904 416545477 416544460 0.000000e+00 1424.0
8 TraesCS3B01G193800 chr7B 91.051 1028 83 9 1882 2906 417224994 417226015 0.000000e+00 1380.0
9 TraesCS3B01G193800 chr7B 90.953 1028 84 9 1882 2906 417237623 417238644 0.000000e+00 1375.0
10 TraesCS3B01G193800 chr4B 94.601 889 44 4 2019 2906 20524187 20525072 0.000000e+00 1373.0
11 TraesCS3B01G193800 chr3A 90.175 1028 80 10 876 1891 165050139 165051157 0.000000e+00 1319.0
12 TraesCS3B01G193800 chr3A 92.170 447 33 2 983 1428 165048513 165048958 5.280000e-177 630.0
13 TraesCS3B01G193800 chr3A 86.494 385 32 5 496 879 164947088 164947453 3.490000e-109 405.0
14 TraesCS3B01G193800 chr3A 86.047 172 24 0 2 173 164937362 164937533 4.950000e-43 185.0
15 TraesCS3B01G193800 chr2B 81.143 1050 162 31 1881 2906 700652852 700651815 0.000000e+00 809.0
16 TraesCS3B01G193800 chr3D 88.924 632 55 9 914 1537 148231121 148230497 0.000000e+00 765.0
17 TraesCS3B01G193800 chr3D 91.892 555 27 7 876 1425 148237938 148237397 0.000000e+00 760.0
18 TraesCS3B01G193800 chr3D 94.757 267 14 0 1615 1881 148230503 148230237 1.610000e-112 416.0
19 TraesCS3B01G193800 chr3D 90.164 183 16 2 557 737 148240846 148240664 1.350000e-58 237.0
20 TraesCS3B01G193800 chr3D 89.583 144 10 2 741 879 148240296 148240153 8.280000e-41 178.0
21 TraesCS3B01G193800 chr3D 100.000 38 0 0 876 913 148231178 148231141 1.440000e-08 71.3
22 TraesCS3B01G193800 chr5D 76.074 163 33 5 11 170 452361893 452361734 2.400000e-11 80.5
23 TraesCS3B01G193800 chr5D 85.185 54 6 2 167 219 452361761 452361709 1.000000e-03 54.7
24 TraesCS3B01G193800 chr5D 100.000 29 0 0 221 249 562919291 562919263 1.000000e-03 54.7
25 TraesCS3B01G193800 chrUn 100.000 29 0 0 221 249 189416640 189416612 1.000000e-03 54.7
26 TraesCS3B01G193800 chrUn 100.000 29 0 0 221 249 449794017 449793989 1.000000e-03 54.7
27 TraesCS3B01G193800 chr6D 100.000 29 0 0 221 249 388026246 388026274 1.000000e-03 54.7
28 TraesCS3B01G193800 chr4D 100.000 29 0 0 221 249 123515547 123515519 1.000000e-03 54.7
29 TraesCS3B01G193800 chr4D 100.000 29 0 0 221 249 123745046 123745018 1.000000e-03 54.7
30 TraesCS3B01G193800 chr1D 100.000 29 0 0 221 249 185738372 185738400 1.000000e-03 54.7
31 TraesCS3B01G193800 chr1D 100.000 29 0 0 221 249 185792476 185792504 1.000000e-03 54.7
32 TraesCS3B01G193800 chr1A 100.000 29 0 0 221 249 50131058 50131030 1.000000e-03 54.7
33 TraesCS3B01G193800 chr1A 100.000 29 0 0 221 249 50193473 50193501 1.000000e-03 54.7
34 TraesCS3B01G193800 chr1A 100.000 29 0 0 221 249 50253944 50253972 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G193800 chr3B 214014584 214017489 2905 False 5367.000000 5367 100.000000 1 2906 1 chr3B.!!$F1 2905
1 TraesCS3B01G193800 chr3B 214027731 214028755 1024 False 1821.000000 1821 98.732000 1882 2906 1 chr3B.!!$F2 1024
2 TraesCS3B01G193800 chr3B 555919053 555920077 1024 False 1317.000000 1317 89.913000 1882 2906 1 chr3B.!!$F5 1024
3 TraesCS3B01G193800 chr3B 214266716 214267648 932 False 1297.000000 1297 91.765000 958 1891 1 chr3B.!!$F3 933
4 TraesCS3B01G193800 chr3B 555906193 555907218 1025 False 1297.000000 1297 89.535000 1881 2906 1 chr3B.!!$F4 1025
5 TraesCS3B01G193800 chr5B 523271202 523272225 1023 False 1604.000000 1604 94.937000 1882 2906 1 chr5B.!!$F1 1024
6 TraesCS3B01G193800 chr5B 523331636 523332660 1024 False 1578.000000 1578 94.450000 1882 2906 1 chr5B.!!$F2 1024
7 TraesCS3B01G193800 chr7B 416544460 416545477 1017 True 1424.000000 1424 91.895000 1882 2904 1 chr7B.!!$R1 1022
8 TraesCS3B01G193800 chr7B 417224994 417226015 1021 False 1380.000000 1380 91.051000 1882 2906 1 chr7B.!!$F1 1024
9 TraesCS3B01G193800 chr7B 417237623 417238644 1021 False 1375.000000 1375 90.953000 1882 2906 1 chr7B.!!$F2 1024
10 TraesCS3B01G193800 chr4B 20524187 20525072 885 False 1373.000000 1373 94.601000 2019 2906 1 chr4B.!!$F1 887
11 TraesCS3B01G193800 chr3A 165048513 165051157 2644 False 974.500000 1319 91.172500 876 1891 2 chr3A.!!$F3 1015
12 TraesCS3B01G193800 chr2B 700651815 700652852 1037 True 809.000000 809 81.143000 1881 2906 1 chr2B.!!$R1 1025
13 TraesCS3B01G193800 chr3D 148230237 148231178 941 True 417.433333 765 94.560333 876 1881 3 chr3D.!!$R1 1005
14 TraesCS3B01G193800 chr3D 148237397 148240846 3449 True 391.666667 760 90.546333 557 1425 3 chr3D.!!$R2 868

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
739 742 0.023103 GACTCGTCTCGTCGTCGTAC 59.977 60.0 1.33 1.58 38.33 3.67 F
833 1205 0.110678 TACAAACGCATCAACCCCCA 59.889 50.0 0.00 0.00 0.00 4.96 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1565 5925 0.329596 GTCTCTGCCCCAAATCCAGT 59.670 55.0 0.0 0.0 0.00 4.00 R
2783 7190 0.468226 TGCTCCTTGAGGTGTTTCGT 59.532 50.0 0.0 0.0 36.34 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.564027 GGATTCGAGCGCCGGTTG 61.564 66.667 16.35 0.00 39.14 3.77
21 22 4.223964 GATTCGAGCGCCGGTTGC 62.224 66.667 16.35 12.25 39.14 4.17
50 51 3.138625 GGATTCCCGCTGGATCGA 58.861 61.111 0.00 0.00 41.40 3.59
51 52 1.445942 GGATTCCCGCTGGATCGAA 59.554 57.895 0.00 0.00 41.40 3.71
52 53 0.035458 GGATTCCCGCTGGATCGAAT 59.965 55.000 0.00 0.00 41.40 3.34
53 54 1.433534 GATTCCCGCTGGATCGAATC 58.566 55.000 0.00 4.01 41.40 2.52
75 76 4.379243 CTCGGTTGGGCGCACTCT 62.379 66.667 12.74 0.00 0.00 3.24
76 77 3.883744 CTCGGTTGGGCGCACTCTT 62.884 63.158 12.74 0.00 0.00 2.85
77 78 3.423154 CGGTTGGGCGCACTCTTC 61.423 66.667 12.74 0.00 0.00 2.87
78 79 3.056328 GGTTGGGCGCACTCTTCC 61.056 66.667 12.74 4.09 0.00 3.46
79 80 3.423154 GTTGGGCGCACTCTTCCG 61.423 66.667 12.74 0.00 0.00 4.30
80 81 4.697756 TTGGGCGCACTCTTCCGG 62.698 66.667 12.74 0.00 0.00 5.14
83 84 4.388499 GGCGCACTCTTCCGGGAA 62.388 66.667 10.83 9.52 0.00 3.97
84 85 2.125106 GCGCACTCTTCCGGGAAT 60.125 61.111 10.44 0.00 0.00 3.01
85 86 2.464459 GCGCACTCTTCCGGGAATG 61.464 63.158 10.44 7.20 0.00 2.67
86 87 1.815421 CGCACTCTTCCGGGAATGG 60.815 63.158 10.44 8.56 0.00 3.16
87 88 2.115291 GCACTCTTCCGGGAATGGC 61.115 63.158 10.44 7.98 0.00 4.40
88 89 1.815421 CACTCTTCCGGGAATGGCG 60.815 63.158 10.44 0.00 0.00 5.69
89 90 2.203070 CTCTTCCGGGAATGGCGG 60.203 66.667 10.44 0.00 0.00 6.13
90 91 2.685743 TCTTCCGGGAATGGCGGA 60.686 61.111 10.44 0.47 0.00 5.54
91 92 2.203070 CTTCCGGGAATGGCGGAG 60.203 66.667 10.44 0.00 33.06 4.63
92 93 3.757248 CTTCCGGGAATGGCGGAGG 62.757 68.421 10.44 0.00 33.06 4.30
95 96 4.547367 CGGGAATGGCGGAGGGTC 62.547 72.222 0.00 0.00 0.00 4.46
96 97 3.407967 GGGAATGGCGGAGGGTCA 61.408 66.667 0.00 0.00 32.67 4.02
97 98 2.757124 GGGAATGGCGGAGGGTCAT 61.757 63.158 0.00 0.00 44.64 3.06
98 99 1.526917 GGAATGGCGGAGGGTCATG 60.527 63.158 0.00 0.00 40.98 3.07
99 100 2.124151 AATGGCGGAGGGTCATGC 60.124 61.111 0.00 0.00 40.98 4.06
100 101 2.891941 GAATGGCGGAGGGTCATGCA 62.892 60.000 0.00 0.00 40.98 3.96
101 102 2.898920 AATGGCGGAGGGTCATGCAG 62.899 60.000 0.00 0.00 40.98 4.41
102 103 3.785859 GGCGGAGGGTCATGCAGA 61.786 66.667 0.00 0.00 0.00 4.26
103 104 2.512515 GCGGAGGGTCATGCAGAC 60.513 66.667 7.52 7.52 46.83 3.51
113 114 1.933853 GTCATGCAGACGACCATAACC 59.066 52.381 0.00 0.00 37.53 2.85
114 115 1.831106 TCATGCAGACGACCATAACCT 59.169 47.619 0.00 0.00 0.00 3.50
115 116 2.159099 TCATGCAGACGACCATAACCTC 60.159 50.000 0.00 0.00 0.00 3.85
116 117 0.535335 TGCAGACGACCATAACCTCC 59.465 55.000 0.00 0.00 0.00 4.30
117 118 0.824759 GCAGACGACCATAACCTCCT 59.175 55.000 0.00 0.00 0.00 3.69
118 119 1.471676 GCAGACGACCATAACCTCCTG 60.472 57.143 0.00 0.00 0.00 3.86
119 120 0.824759 AGACGACCATAACCTCCTGC 59.175 55.000 0.00 0.00 0.00 4.85
120 121 0.824759 GACGACCATAACCTCCTGCT 59.175 55.000 0.00 0.00 0.00 4.24
121 122 0.824759 ACGACCATAACCTCCTGCTC 59.175 55.000 0.00 0.00 0.00 4.26
122 123 0.105039 CGACCATAACCTCCTGCTCC 59.895 60.000 0.00 0.00 0.00 4.70
123 124 0.470341 GACCATAACCTCCTGCTCCC 59.530 60.000 0.00 0.00 0.00 4.30
124 125 0.988678 ACCATAACCTCCTGCTCCCC 60.989 60.000 0.00 0.00 0.00 4.81
125 126 1.447643 CATAACCTCCTGCTCCCCG 59.552 63.158 0.00 0.00 0.00 5.73
126 127 2.444256 ATAACCTCCTGCTCCCCGC 61.444 63.158 0.00 0.00 39.77 6.13
146 147 4.208686 GGGACGCTGCCCTAGTCG 62.209 72.222 3.64 0.00 45.12 4.18
147 148 3.138798 GGACGCTGCCCTAGTCGA 61.139 66.667 0.00 0.00 35.87 4.20
148 149 2.491022 GGACGCTGCCCTAGTCGAT 61.491 63.158 0.00 0.00 35.87 3.59
149 150 1.299468 GACGCTGCCCTAGTCGATG 60.299 63.158 0.00 0.00 32.66 3.84
150 151 2.028190 CGCTGCCCTAGTCGATGG 59.972 66.667 0.00 0.00 0.00 3.51
151 152 2.490148 CGCTGCCCTAGTCGATGGA 61.490 63.158 0.00 0.00 0.00 3.41
152 153 1.810606 CGCTGCCCTAGTCGATGGAT 61.811 60.000 0.00 0.00 0.00 3.41
153 154 0.037790 GCTGCCCTAGTCGATGGATC 60.038 60.000 0.00 0.00 0.00 3.36
154 155 1.332195 CTGCCCTAGTCGATGGATCA 58.668 55.000 0.00 0.00 0.00 2.92
155 156 1.271934 CTGCCCTAGTCGATGGATCAG 59.728 57.143 0.00 0.00 0.00 2.90
156 157 0.605589 GCCCTAGTCGATGGATCAGG 59.394 60.000 0.00 1.85 0.00 3.86
157 158 1.823648 GCCCTAGTCGATGGATCAGGA 60.824 57.143 8.56 0.00 31.09 3.86
158 159 2.166829 CCCTAGTCGATGGATCAGGAG 58.833 57.143 8.56 0.00 31.09 3.69
159 160 2.489985 CCCTAGTCGATGGATCAGGAGT 60.490 54.545 8.56 0.00 31.09 3.85
160 161 2.556189 CCTAGTCGATGGATCAGGAGTG 59.444 54.545 0.00 0.00 31.09 3.51
161 162 1.407936 AGTCGATGGATCAGGAGTGG 58.592 55.000 0.00 0.00 0.00 4.00
162 163 1.115467 GTCGATGGATCAGGAGTGGT 58.885 55.000 0.00 0.00 0.00 4.16
163 164 1.067821 GTCGATGGATCAGGAGTGGTC 59.932 57.143 0.00 0.00 32.36 4.02
164 165 0.031314 CGATGGATCAGGAGTGGTCG 59.969 60.000 0.00 0.00 34.19 4.79
165 166 0.390860 GATGGATCAGGAGTGGTCGG 59.609 60.000 0.00 0.00 34.19 4.79
166 167 0.032117 ATGGATCAGGAGTGGTCGGA 60.032 55.000 0.00 0.00 34.19 4.55
167 168 0.684479 TGGATCAGGAGTGGTCGGAG 60.684 60.000 0.00 0.00 34.19 4.63
168 169 0.684805 GGATCAGGAGTGGTCGGAGT 60.685 60.000 0.00 0.00 34.19 3.85
169 170 0.741915 GATCAGGAGTGGTCGGAGTC 59.258 60.000 0.00 0.00 0.00 3.36
170 171 1.032657 ATCAGGAGTGGTCGGAGTCG 61.033 60.000 0.00 0.00 37.82 4.18
171 172 1.674651 CAGGAGTGGTCGGAGTCGA 60.675 63.158 0.00 0.00 43.86 4.20
180 181 2.720659 TCGGAGTCGATGGATCAGG 58.279 57.895 0.00 0.00 40.88 3.86
181 182 0.182775 TCGGAGTCGATGGATCAGGA 59.817 55.000 0.00 0.00 40.88 3.86
182 183 0.595588 CGGAGTCGATGGATCAGGAG 59.404 60.000 0.00 0.00 39.00 3.69
183 184 1.698506 GGAGTCGATGGATCAGGAGT 58.301 55.000 0.00 0.00 0.00 3.85
184 185 1.339610 GGAGTCGATGGATCAGGAGTG 59.660 57.143 0.00 0.00 0.00 3.51
185 186 1.339610 GAGTCGATGGATCAGGAGTGG 59.660 57.143 0.00 0.00 0.00 4.00
186 187 1.115467 GTCGATGGATCAGGAGTGGT 58.885 55.000 0.00 0.00 0.00 4.16
187 188 1.067821 GTCGATGGATCAGGAGTGGTC 59.932 57.143 0.00 0.00 32.36 4.02
188 189 0.031314 CGATGGATCAGGAGTGGTCG 59.969 60.000 0.00 0.00 34.19 4.79
189 190 0.390860 GATGGATCAGGAGTGGTCGG 59.609 60.000 0.00 0.00 34.19 4.79
190 191 0.032117 ATGGATCAGGAGTGGTCGGA 60.032 55.000 0.00 0.00 34.19 4.55
191 192 0.684479 TGGATCAGGAGTGGTCGGAG 60.684 60.000 0.00 0.00 34.19 4.63
192 193 0.684805 GGATCAGGAGTGGTCGGAGT 60.685 60.000 0.00 0.00 34.19 3.85
193 194 0.741915 GATCAGGAGTGGTCGGAGTC 59.258 60.000 0.00 0.00 0.00 3.36
194 195 1.032657 ATCAGGAGTGGTCGGAGTCG 61.033 60.000 0.00 0.00 37.82 4.18
195 196 1.674651 CAGGAGTGGTCGGAGTCGA 60.675 63.158 0.00 0.00 43.86 4.20
205 206 4.593864 GGAGTCGATCCGCTGCCC 62.594 72.222 0.00 0.00 38.67 5.36
206 207 4.933064 GAGTCGATCCGCTGCCCG 62.933 72.222 0.00 0.00 0.00 6.13
216 217 4.552365 GCTGCCCGCCATGCTAGA 62.552 66.667 0.00 0.00 0.00 2.43
217 218 2.280660 CTGCCCGCCATGCTAGAG 60.281 66.667 0.00 0.00 0.00 2.43
218 219 2.763710 TGCCCGCCATGCTAGAGA 60.764 61.111 0.00 0.00 0.00 3.10
219 220 2.315781 CTGCCCGCCATGCTAGAGAA 62.316 60.000 0.00 0.00 0.00 2.87
220 221 1.153168 GCCCGCCATGCTAGAGAAA 60.153 57.895 0.00 0.00 0.00 2.52
221 222 1.440145 GCCCGCCATGCTAGAGAAAC 61.440 60.000 0.00 0.00 0.00 2.78
222 223 1.154205 CCCGCCATGCTAGAGAAACG 61.154 60.000 0.00 0.00 0.00 3.60
223 224 0.179111 CCGCCATGCTAGAGAAACGA 60.179 55.000 0.00 0.00 0.00 3.85
224 225 1.203928 CGCCATGCTAGAGAAACGAG 58.796 55.000 0.00 0.00 0.00 4.18
225 226 0.933796 GCCATGCTAGAGAAACGAGC 59.066 55.000 0.00 0.00 45.20 5.03
226 227 1.472376 GCCATGCTAGAGAAACGAGCT 60.472 52.381 0.00 0.00 45.21 4.09
227 228 2.898705 CCATGCTAGAGAAACGAGCTT 58.101 47.619 0.00 0.00 45.21 3.74
228 229 2.863137 CCATGCTAGAGAAACGAGCTTC 59.137 50.000 0.00 0.00 45.21 3.86
229 230 3.430098 CCATGCTAGAGAAACGAGCTTCT 60.430 47.826 0.00 0.00 45.21 2.85
230 231 4.202060 CCATGCTAGAGAAACGAGCTTCTA 60.202 45.833 0.00 0.00 45.21 2.10
231 232 4.358494 TGCTAGAGAAACGAGCTTCTAC 57.642 45.455 0.00 0.00 45.21 2.59
232 233 3.128938 TGCTAGAGAAACGAGCTTCTACC 59.871 47.826 0.00 0.00 45.21 3.18
233 234 3.489568 GCTAGAGAAACGAGCTTCTACCC 60.490 52.174 0.00 0.00 42.48 3.69
234 235 1.473278 AGAGAAACGAGCTTCTACCCG 59.527 52.381 0.00 0.00 35.76 5.28
235 236 1.471684 GAGAAACGAGCTTCTACCCGA 59.528 52.381 0.00 0.00 35.76 5.14
236 237 1.201880 AGAAACGAGCTTCTACCCGAC 59.798 52.381 0.00 0.00 33.81 4.79
237 238 0.245813 AAACGAGCTTCTACCCGACC 59.754 55.000 0.00 0.00 0.00 4.79
238 239 1.930908 AACGAGCTTCTACCCGACCG 61.931 60.000 0.00 0.00 0.00 4.79
239 240 2.110967 CGAGCTTCTACCCGACCGA 61.111 63.158 0.00 0.00 0.00 4.69
240 241 1.445716 CGAGCTTCTACCCGACCGAT 61.446 60.000 0.00 0.00 0.00 4.18
241 242 0.745468 GAGCTTCTACCCGACCGATT 59.255 55.000 0.00 0.00 0.00 3.34
242 243 1.952296 GAGCTTCTACCCGACCGATTA 59.048 52.381 0.00 0.00 0.00 1.75
243 244 1.955080 AGCTTCTACCCGACCGATTAG 59.045 52.381 0.00 0.00 0.00 1.73
244 245 1.602416 GCTTCTACCCGACCGATTAGC 60.602 57.143 0.00 0.00 0.00 3.09
245 246 1.000496 CTTCTACCCGACCGATTAGCC 60.000 57.143 0.00 0.00 0.00 3.93
246 247 0.825010 TCTACCCGACCGATTAGCCC 60.825 60.000 0.00 0.00 0.00 5.19
247 248 1.076118 TACCCGACCGATTAGCCCA 60.076 57.895 0.00 0.00 0.00 5.36
248 249 1.111116 TACCCGACCGATTAGCCCAG 61.111 60.000 0.00 0.00 0.00 4.45
249 250 2.421739 CCGACCGATTAGCCCAGG 59.578 66.667 0.00 0.00 0.00 4.45
250 251 2.280186 CGACCGATTAGCCCAGGC 60.280 66.667 0.00 0.00 42.33 4.85
251 252 2.111251 GACCGATTAGCCCAGGCC 59.889 66.667 4.70 0.00 43.17 5.19
252 253 3.809374 GACCGATTAGCCCAGGCCG 62.809 68.421 4.70 1.35 43.17 6.13
253 254 4.626081 CCGATTAGCCCAGGCCGG 62.626 72.222 4.70 7.38 43.17 6.13
254 255 3.546543 CGATTAGCCCAGGCCGGA 61.547 66.667 5.05 0.00 43.17 5.14
255 256 2.915869 GATTAGCCCAGGCCGGAA 59.084 61.111 5.05 0.00 43.17 4.30
256 257 1.226262 GATTAGCCCAGGCCGGAAA 59.774 57.895 5.05 6.79 43.17 3.13
257 258 0.178990 GATTAGCCCAGGCCGGAAAT 60.179 55.000 5.05 10.48 43.17 2.17
258 259 0.178990 ATTAGCCCAGGCCGGAAATC 60.179 55.000 5.05 0.00 43.17 2.17
259 260 2.602746 TTAGCCCAGGCCGGAAATCG 62.603 60.000 5.05 0.00 43.17 3.34
261 262 4.489771 CCCAGGCCGGAAATCGCT 62.490 66.667 5.05 0.00 36.56 4.93
262 263 2.504032 CCAGGCCGGAAATCGCTA 59.496 61.111 5.05 0.00 36.56 4.26
263 264 1.595382 CCAGGCCGGAAATCGCTAG 60.595 63.158 5.05 0.00 36.56 3.42
264 265 1.441729 CAGGCCGGAAATCGCTAGA 59.558 57.895 5.05 0.00 37.59 2.43
265 266 0.179084 CAGGCCGGAAATCGCTAGAA 60.179 55.000 5.05 0.00 37.59 2.10
266 267 0.105039 AGGCCGGAAATCGCTAGAAG 59.895 55.000 5.05 0.00 37.59 2.85
267 268 0.880718 GGCCGGAAATCGCTAGAAGG 60.881 60.000 5.05 0.00 37.59 3.46
268 269 0.880718 GCCGGAAATCGCTAGAAGGG 60.881 60.000 5.05 0.00 37.59 3.95
269 270 0.750850 CCGGAAATCGCTAGAAGGGA 59.249 55.000 0.00 0.00 41.55 4.20
270 271 1.269831 CCGGAAATCGCTAGAAGGGAG 60.270 57.143 0.00 0.00 40.62 4.30
271 272 1.870167 CGGAAATCGCTAGAAGGGAGC 60.870 57.143 0.00 0.00 40.62 4.70
272 273 1.414550 GGAAATCGCTAGAAGGGAGCT 59.585 52.381 0.00 0.00 40.62 4.09
273 274 2.158885 GGAAATCGCTAGAAGGGAGCTT 60.159 50.000 0.00 0.00 40.62 3.74
274 275 2.611225 AATCGCTAGAAGGGAGCTTG 57.389 50.000 0.00 0.00 40.62 4.01
275 276 1.781786 ATCGCTAGAAGGGAGCTTGA 58.218 50.000 0.00 0.00 40.62 3.02
276 277 1.107114 TCGCTAGAAGGGAGCTTGAG 58.893 55.000 0.00 0.00 37.81 3.02
277 278 0.103937 CGCTAGAAGGGAGCTTGAGG 59.896 60.000 0.00 0.00 37.81 3.86
278 279 0.467804 GCTAGAAGGGAGCTTGAGGG 59.532 60.000 0.00 0.00 36.96 4.30
279 280 0.467804 CTAGAAGGGAGCTTGAGGGC 59.532 60.000 0.00 0.00 0.00 5.19
280 281 1.330655 TAGAAGGGAGCTTGAGGGCG 61.331 60.000 0.00 0.00 37.29 6.13
281 282 3.689002 GAAGGGAGCTTGAGGGCGG 62.689 68.421 0.00 0.00 37.29 6.13
282 283 4.722535 AGGGAGCTTGAGGGCGGA 62.723 66.667 0.00 0.00 37.29 5.54
283 284 4.475135 GGGAGCTTGAGGGCGGAC 62.475 72.222 0.00 0.00 37.29 4.79
284 285 3.394836 GGAGCTTGAGGGCGGACT 61.395 66.667 0.00 0.00 37.29 3.85
285 286 2.125350 GAGCTTGAGGGCGGACTG 60.125 66.667 0.00 0.00 37.29 3.51
286 287 2.604686 AGCTTGAGGGCGGACTGA 60.605 61.111 0.00 0.00 37.29 3.41
287 288 2.172483 GAGCTTGAGGGCGGACTGAA 62.172 60.000 0.00 0.00 37.29 3.02
288 289 1.743252 GCTTGAGGGCGGACTGAAG 60.743 63.158 0.00 0.00 35.22 3.02
289 290 1.975327 CTTGAGGGCGGACTGAAGA 59.025 57.895 0.00 0.00 34.18 2.87
290 291 0.108424 CTTGAGGGCGGACTGAAGAG 60.108 60.000 0.00 0.00 34.18 2.85
291 292 1.544825 TTGAGGGCGGACTGAAGAGG 61.545 60.000 0.00 0.00 0.00 3.69
292 293 2.685380 AGGGCGGACTGAAGAGGG 60.685 66.667 0.00 0.00 0.00 4.30
293 294 2.683933 GGGCGGACTGAAGAGGGA 60.684 66.667 0.00 0.00 0.00 4.20
294 295 2.066999 GGGCGGACTGAAGAGGGAT 61.067 63.158 0.00 0.00 0.00 3.85
295 296 1.144936 GGCGGACTGAAGAGGGATG 59.855 63.158 0.00 0.00 0.00 3.51
296 297 1.522580 GCGGACTGAAGAGGGATGC 60.523 63.158 0.00 0.00 0.00 3.91
297 298 1.144936 CGGACTGAAGAGGGATGCC 59.855 63.158 0.00 0.00 0.00 4.40
298 299 1.333636 CGGACTGAAGAGGGATGCCT 61.334 60.000 4.97 4.97 0.00 4.75
299 300 1.794714 GGACTGAAGAGGGATGCCTA 58.205 55.000 5.42 0.00 0.00 3.93
300 301 2.119495 GGACTGAAGAGGGATGCCTAA 58.881 52.381 5.42 0.00 0.00 2.69
301 302 2.505819 GGACTGAAGAGGGATGCCTAAA 59.494 50.000 5.42 0.00 0.00 1.85
302 303 3.054361 GGACTGAAGAGGGATGCCTAAAA 60.054 47.826 5.42 0.00 0.00 1.52
303 304 4.385754 GGACTGAAGAGGGATGCCTAAAAT 60.386 45.833 5.42 0.00 0.00 1.82
304 305 5.196695 GACTGAAGAGGGATGCCTAAAATT 58.803 41.667 5.42 0.00 0.00 1.82
305 306 5.583932 ACTGAAGAGGGATGCCTAAAATTT 58.416 37.500 5.42 0.00 0.00 1.82
306 307 5.420104 ACTGAAGAGGGATGCCTAAAATTTG 59.580 40.000 5.42 0.00 0.00 2.32
307 308 5.579047 TGAAGAGGGATGCCTAAAATTTGA 58.421 37.500 5.42 0.00 0.00 2.69
308 309 6.197168 TGAAGAGGGATGCCTAAAATTTGAT 58.803 36.000 5.42 0.00 0.00 2.57
309 310 6.322201 TGAAGAGGGATGCCTAAAATTTGATC 59.678 38.462 5.42 0.00 0.00 2.92
310 311 5.143369 AGAGGGATGCCTAAAATTTGATCC 58.857 41.667 5.42 0.00 0.00 3.36
311 312 5.103344 AGAGGGATGCCTAAAATTTGATCCT 60.103 40.000 5.42 0.00 31.70 3.24
312 313 6.103205 AGAGGGATGCCTAAAATTTGATCCTA 59.897 38.462 5.42 0.00 31.70 2.94
313 314 6.310149 AGGGATGCCTAAAATTTGATCCTAG 58.690 40.000 2.76 0.00 31.70 3.02
314 315 6.103205 AGGGATGCCTAAAATTTGATCCTAGA 59.897 38.462 2.76 0.00 31.70 2.43
315 316 6.950619 GGGATGCCTAAAATTTGATCCTAGAT 59.049 38.462 0.00 0.00 31.70 1.98
316 317 7.094032 GGGATGCCTAAAATTTGATCCTAGATG 60.094 40.741 0.00 0.00 31.70 2.90
317 318 6.639632 TGCCTAAAATTTGATCCTAGATGC 57.360 37.500 0.00 0.00 0.00 3.91
318 319 5.239306 TGCCTAAAATTTGATCCTAGATGCG 59.761 40.000 0.00 0.00 0.00 4.73
319 320 5.335191 GCCTAAAATTTGATCCTAGATGCGG 60.335 44.000 0.00 0.00 0.00 5.69
320 321 5.997746 CCTAAAATTTGATCCTAGATGCGGA 59.002 40.000 0.00 0.00 34.52 5.54
321 322 6.656693 CCTAAAATTTGATCCTAGATGCGGAT 59.343 38.462 0.00 0.00 43.77 4.18
322 323 5.954296 AAATTTGATCCTAGATGCGGATG 57.046 39.130 0.00 0.00 41.24 3.51
323 324 4.897509 ATTTGATCCTAGATGCGGATGA 57.102 40.909 0.00 0.00 41.24 2.92
324 325 3.949842 TTGATCCTAGATGCGGATGAG 57.050 47.619 0.00 0.00 41.24 2.90
325 326 3.160679 TGATCCTAGATGCGGATGAGA 57.839 47.619 0.00 0.00 41.24 3.27
326 327 3.500343 TGATCCTAGATGCGGATGAGAA 58.500 45.455 0.00 0.00 41.24 2.87
327 328 3.256879 TGATCCTAGATGCGGATGAGAAC 59.743 47.826 0.00 0.00 41.24 3.01
328 329 1.609072 TCCTAGATGCGGATGAGAACG 59.391 52.381 0.00 0.00 0.00 3.95
329 330 1.609072 CCTAGATGCGGATGAGAACGA 59.391 52.381 0.00 0.00 0.00 3.85
330 331 2.034685 CCTAGATGCGGATGAGAACGAA 59.965 50.000 0.00 0.00 0.00 3.85
331 332 2.898729 AGATGCGGATGAGAACGAAT 57.101 45.000 0.00 0.00 0.00 3.34
332 333 4.082733 CCTAGATGCGGATGAGAACGAATA 60.083 45.833 0.00 0.00 0.00 1.75
333 334 4.527509 AGATGCGGATGAGAACGAATAT 57.472 40.909 0.00 0.00 0.00 1.28
334 335 5.644977 AGATGCGGATGAGAACGAATATA 57.355 39.130 0.00 0.00 0.00 0.86
335 336 6.214191 AGATGCGGATGAGAACGAATATAT 57.786 37.500 0.00 0.00 0.00 0.86
336 337 7.334844 AGATGCGGATGAGAACGAATATATA 57.665 36.000 0.00 0.00 0.00 0.86
337 338 7.946207 AGATGCGGATGAGAACGAATATATAT 58.054 34.615 0.00 0.00 0.00 0.86
338 339 7.864882 AGATGCGGATGAGAACGAATATATATG 59.135 37.037 0.00 0.00 0.00 1.78
339 340 6.273071 TGCGGATGAGAACGAATATATATGG 58.727 40.000 0.00 0.00 0.00 2.74
340 341 6.096282 TGCGGATGAGAACGAATATATATGGA 59.904 38.462 0.00 0.00 0.00 3.41
341 342 6.638873 GCGGATGAGAACGAATATATATGGAG 59.361 42.308 0.00 0.00 0.00 3.86
342 343 7.682261 GCGGATGAGAACGAATATATATGGAGT 60.682 40.741 0.00 0.00 0.00 3.85
343 344 7.858382 CGGATGAGAACGAATATATATGGAGTC 59.142 40.741 0.00 0.00 0.00 3.36
344 345 7.858382 GGATGAGAACGAATATATATGGAGTCG 59.142 40.741 11.29 11.29 34.77 4.18
345 346 7.916914 TGAGAACGAATATATATGGAGTCGA 57.083 36.000 17.30 0.00 32.98 4.20
346 347 7.975750 TGAGAACGAATATATATGGAGTCGAG 58.024 38.462 17.30 0.00 32.98 4.04
347 348 7.065923 TGAGAACGAATATATATGGAGTCGAGG 59.934 40.741 17.30 0.00 32.98 4.63
348 349 6.885376 AGAACGAATATATATGGAGTCGAGGT 59.115 38.462 17.30 5.99 32.98 3.85
349 350 6.438259 ACGAATATATATGGAGTCGAGGTG 57.562 41.667 17.30 0.00 32.98 4.00
350 351 5.357314 ACGAATATATATGGAGTCGAGGTGG 59.643 44.000 17.30 0.00 32.98 4.61
351 352 5.221067 CGAATATATATGGAGTCGAGGTGGG 60.221 48.000 8.28 0.00 0.00 4.61
352 353 3.827817 ATATATGGAGTCGAGGTGGGA 57.172 47.619 0.00 0.00 0.00 4.37
353 354 1.705873 ATATGGAGTCGAGGTGGGAC 58.294 55.000 0.00 0.00 34.62 4.46
354 355 0.333652 TATGGAGTCGAGGTGGGACA 59.666 55.000 0.00 0.00 36.87 4.02
355 356 0.544357 ATGGAGTCGAGGTGGGACAA 60.544 55.000 0.00 0.00 44.16 3.18
363 364 4.265056 GGTGGGACAACGTGGGCT 62.265 66.667 0.00 0.00 44.16 5.19
364 365 2.745037 GTGGGACAACGTGGGCTA 59.255 61.111 0.00 0.00 44.16 3.93
365 366 1.375523 GTGGGACAACGTGGGCTAG 60.376 63.158 0.00 0.00 44.16 3.42
366 367 1.534476 TGGGACAACGTGGGCTAGA 60.534 57.895 0.00 0.00 31.92 2.43
367 368 0.907704 TGGGACAACGTGGGCTAGAT 60.908 55.000 0.00 0.00 31.92 1.98
368 369 0.179081 GGGACAACGTGGGCTAGATC 60.179 60.000 0.00 0.00 0.00 2.75
369 370 0.824759 GGACAACGTGGGCTAGATCT 59.175 55.000 0.00 0.00 0.00 2.75
370 371 1.471676 GGACAACGTGGGCTAGATCTG 60.472 57.143 5.18 0.00 0.00 2.90
371 372 1.476891 GACAACGTGGGCTAGATCTGA 59.523 52.381 5.18 0.00 0.00 3.27
372 373 1.204941 ACAACGTGGGCTAGATCTGAC 59.795 52.381 5.18 0.00 0.00 3.51
373 374 1.204704 CAACGTGGGCTAGATCTGACA 59.795 52.381 5.18 0.00 0.00 3.58
374 375 1.781786 ACGTGGGCTAGATCTGACAT 58.218 50.000 5.18 0.00 0.00 3.06
375 376 1.410517 ACGTGGGCTAGATCTGACATG 59.589 52.381 5.18 6.92 0.00 3.21
376 377 1.683385 CGTGGGCTAGATCTGACATGA 59.317 52.381 5.18 0.00 0.00 3.07
377 378 2.544694 CGTGGGCTAGATCTGACATGAC 60.545 54.545 5.18 0.00 0.00 3.06
378 379 1.683385 TGGGCTAGATCTGACATGACG 59.317 52.381 5.18 0.00 0.00 4.35
379 380 1.000283 GGGCTAGATCTGACATGACGG 60.000 57.143 5.18 0.00 0.00 4.79
380 381 1.957177 GGCTAGATCTGACATGACGGA 59.043 52.381 9.14 9.14 0.00 4.69
381 382 2.560542 GGCTAGATCTGACATGACGGAT 59.439 50.000 17.69 17.69 38.41 4.18
382 383 3.573598 GCTAGATCTGACATGACGGATG 58.426 50.000 21.71 10.39 36.21 3.51
383 384 2.522836 AGATCTGACATGACGGATGC 57.477 50.000 21.71 13.68 36.21 3.91
384 385 1.135046 GATCTGACATGACGGATGCG 58.865 55.000 21.71 4.58 36.21 4.73
385 386 0.461548 ATCTGACATGACGGATGCGT 59.538 50.000 13.64 13.64 35.15 5.24
386 387 0.458370 TCTGACATGACGGATGCGTG 60.458 55.000 19.71 5.45 35.15 5.34
387 388 2.028766 CTGACATGACGGATGCGTGC 62.029 60.000 19.71 9.59 35.15 5.34
388 389 3.142867 GACATGACGGATGCGTGCG 62.143 63.158 19.71 18.92 45.43 5.34
389 390 4.580044 CATGACGGATGCGTGCGC 62.580 66.667 19.71 12.92 43.59 6.09
407 408 3.292936 CGGGTCCCTCCGTATCCG 61.293 72.222 6.29 0.00 44.60 4.18
408 409 3.613689 GGGTCCCTCCGTATCCGC 61.614 72.222 0.00 0.00 37.00 5.54
409 410 3.613689 GGTCCCTCCGTATCCGCC 61.614 72.222 0.00 0.00 0.00 6.13
410 411 2.521224 GTCCCTCCGTATCCGCCT 60.521 66.667 0.00 0.00 0.00 5.52
411 412 1.228367 GTCCCTCCGTATCCGCCTA 60.228 63.158 0.00 0.00 0.00 3.93
412 413 1.074423 TCCCTCCGTATCCGCCTAG 59.926 63.158 0.00 0.00 0.00 3.02
413 414 1.074423 CCCTCCGTATCCGCCTAGA 59.926 63.158 0.00 0.00 0.00 2.43
414 415 0.323542 CCCTCCGTATCCGCCTAGAT 60.324 60.000 0.00 0.00 0.00 1.98
415 416 1.546961 CCTCCGTATCCGCCTAGATT 58.453 55.000 0.00 0.00 0.00 2.40
416 417 1.893801 CCTCCGTATCCGCCTAGATTT 59.106 52.381 0.00 0.00 0.00 2.17
417 418 2.094649 CCTCCGTATCCGCCTAGATTTC 60.095 54.545 0.00 0.00 0.00 2.17
418 419 1.538512 TCCGTATCCGCCTAGATTTCG 59.461 52.381 0.00 0.00 0.00 3.46
419 420 1.402456 CCGTATCCGCCTAGATTTCGG 60.402 57.143 0.00 0.00 44.16 4.30
420 421 1.711206 GTATCCGCCTAGATTTCGGC 58.289 55.000 0.00 0.00 42.65 5.54
421 422 1.272769 GTATCCGCCTAGATTTCGGCT 59.727 52.381 0.00 0.00 44.11 5.52
422 423 0.034059 ATCCGCCTAGATTTCGGCTG 59.966 55.000 0.00 0.00 44.11 4.85
423 424 1.595382 CCGCCTAGATTTCGGCTGG 60.595 63.158 0.00 0.00 44.11 4.85
424 425 1.441729 CGCCTAGATTTCGGCTGGA 59.558 57.895 0.00 0.00 44.11 3.86
425 426 0.876342 CGCCTAGATTTCGGCTGGAC 60.876 60.000 0.00 0.00 44.11 4.02
426 427 0.876342 GCCTAGATTTCGGCTGGACG 60.876 60.000 0.00 0.00 42.98 4.79
427 428 0.460311 CCTAGATTTCGGCTGGACGT 59.540 55.000 0.00 0.00 34.94 4.34
428 429 1.560923 CTAGATTTCGGCTGGACGTG 58.439 55.000 0.00 0.00 34.94 4.49
429 430 1.134367 CTAGATTTCGGCTGGACGTGA 59.866 52.381 0.00 0.00 34.94 4.35
430 431 0.537188 AGATTTCGGCTGGACGTGAT 59.463 50.000 0.00 0.00 34.94 3.06
431 432 1.066143 AGATTTCGGCTGGACGTGATT 60.066 47.619 0.00 0.00 34.94 2.57
432 433 2.167693 AGATTTCGGCTGGACGTGATTA 59.832 45.455 0.00 0.00 34.94 1.75
433 434 1.717194 TTTCGGCTGGACGTGATTAC 58.283 50.000 0.00 0.00 34.94 1.89
434 435 0.108520 TTCGGCTGGACGTGATTACC 60.109 55.000 0.00 0.00 34.94 2.85
435 436 1.520787 CGGCTGGACGTGATTACCC 60.521 63.158 0.00 0.00 0.00 3.69
436 437 1.153229 GGCTGGACGTGATTACCCC 60.153 63.158 0.00 0.00 0.00 4.95
437 438 1.600107 GCTGGACGTGATTACCCCA 59.400 57.895 0.00 0.00 0.00 4.96
438 439 0.180406 GCTGGACGTGATTACCCCAT 59.820 55.000 0.00 0.00 0.00 4.00
439 440 1.414919 GCTGGACGTGATTACCCCATA 59.585 52.381 0.00 0.00 0.00 2.74
440 441 2.805657 GCTGGACGTGATTACCCCATAC 60.806 54.545 0.00 0.00 0.00 2.39
441 442 2.432874 CTGGACGTGATTACCCCATACA 59.567 50.000 0.00 0.00 0.00 2.29
442 443 2.168936 TGGACGTGATTACCCCATACAC 59.831 50.000 0.00 0.00 0.00 2.90
443 444 2.484241 GGACGTGATTACCCCATACACC 60.484 54.545 0.00 0.00 0.00 4.16
444 445 2.433239 GACGTGATTACCCCATACACCT 59.567 50.000 0.00 0.00 0.00 4.00
445 446 3.638160 GACGTGATTACCCCATACACCTA 59.362 47.826 0.00 0.00 0.00 3.08
446 447 3.640029 ACGTGATTACCCCATACACCTAG 59.360 47.826 0.00 0.00 0.00 3.02
447 448 3.006537 CGTGATTACCCCATACACCTAGG 59.993 52.174 7.41 7.41 0.00 3.02
448 449 3.326880 GTGATTACCCCATACACCTAGGG 59.673 52.174 14.81 4.64 45.75 3.53
449 450 1.810455 TTACCCCATACACCTAGGGC 58.190 55.000 14.81 0.00 43.96 5.19
450 451 0.104830 TACCCCATACACCTAGGGCC 60.105 60.000 14.81 0.00 43.96 5.80
451 452 2.516888 CCCCATACACCTAGGGCCG 61.517 68.421 14.81 3.50 41.42 6.13
452 453 2.516888 CCCATACACCTAGGGCCGG 61.517 68.421 14.81 0.00 35.44 6.13
453 454 1.764854 CCATACACCTAGGGCCGGT 60.765 63.158 14.81 8.21 34.38 5.28
454 455 0.470456 CCATACACCTAGGGCCGGTA 60.470 60.000 14.81 10.17 32.37 4.02
455 456 0.677842 CATACACCTAGGGCCGGTAC 59.322 60.000 14.81 0.00 32.37 3.34
476 477 3.396491 GACGTCGAGTCGGAATTGT 57.604 52.632 13.54 4.32 40.43 2.71
477 478 0.982673 GACGTCGAGTCGGAATTGTG 59.017 55.000 13.54 0.00 40.43 3.33
478 479 0.313043 ACGTCGAGTCGGAATTGTGT 59.687 50.000 13.54 0.00 34.94 3.72
479 480 0.708370 CGTCGAGTCGGAATTGTGTG 59.292 55.000 13.54 0.00 0.00 3.82
480 481 1.664874 CGTCGAGTCGGAATTGTGTGA 60.665 52.381 13.54 0.00 0.00 3.58
481 482 1.719780 GTCGAGTCGGAATTGTGTGAC 59.280 52.381 13.54 0.00 0.00 3.67
482 483 1.068474 CGAGTCGGAATTGTGTGACC 58.932 55.000 4.10 0.00 31.75 4.02
483 484 1.068474 GAGTCGGAATTGTGTGACCG 58.932 55.000 0.00 0.00 45.61 4.79
484 485 0.320421 AGTCGGAATTGTGTGACCGG 60.320 55.000 0.00 0.00 44.57 5.28
485 486 0.601841 GTCGGAATTGTGTGACCGGT 60.602 55.000 6.92 6.92 44.57 5.28
486 487 0.601576 TCGGAATTGTGTGACCGGTG 60.602 55.000 14.63 0.00 44.57 4.94
487 488 0.601576 CGGAATTGTGTGACCGGTGA 60.602 55.000 14.63 0.00 41.41 4.02
488 489 1.156736 GGAATTGTGTGACCGGTGAG 58.843 55.000 14.63 0.00 0.00 3.51
489 490 1.542547 GGAATTGTGTGACCGGTGAGT 60.543 52.381 14.63 0.00 0.00 3.41
490 491 2.289195 GGAATTGTGTGACCGGTGAGTA 60.289 50.000 14.63 0.00 0.00 2.59
491 492 2.450609 ATTGTGTGACCGGTGAGTAC 57.549 50.000 14.63 6.63 0.00 2.73
492 493 0.390124 TTGTGTGACCGGTGAGTACC 59.610 55.000 14.63 0.00 43.89 3.34
501 502 3.478540 GGTGAGTACCAGGCCATTC 57.521 57.895 5.01 0.00 46.71 2.67
502 503 0.462047 GGTGAGTACCAGGCCATTCG 60.462 60.000 5.01 0.00 46.71 3.34
503 504 1.090052 GTGAGTACCAGGCCATTCGC 61.090 60.000 5.01 0.00 0.00 4.70
504 505 1.883084 GAGTACCAGGCCATTCGCG 60.883 63.158 5.01 0.00 38.94 5.87
505 506 3.573491 GTACCAGGCCATTCGCGC 61.573 66.667 5.01 0.00 38.94 6.86
522 523 4.789123 CGGGCGTAGGGGTTTGGG 62.789 72.222 0.00 0.00 0.00 4.12
523 524 3.332385 GGGCGTAGGGGTTTGGGA 61.332 66.667 0.00 0.00 0.00 4.37
524 525 2.271173 GGCGTAGGGGTTTGGGAG 59.729 66.667 0.00 0.00 0.00 4.30
525 526 2.437895 GCGTAGGGGTTTGGGAGC 60.438 66.667 0.00 0.00 0.00 4.70
526 527 2.271173 CGTAGGGGTTTGGGAGCC 59.729 66.667 0.00 0.00 45.48 4.70
531 532 4.295199 GGGTTTGGGAGCCCGGTT 62.295 66.667 0.00 0.00 40.14 4.44
532 533 2.989253 GGTTTGGGAGCCCGGTTG 60.989 66.667 0.00 0.00 39.42 3.77
533 534 2.203437 GTTTGGGAGCCCGGTTGT 60.203 61.111 0.00 0.00 39.42 3.32
534 535 1.073548 GTTTGGGAGCCCGGTTGTA 59.926 57.895 0.00 0.00 39.42 2.41
535 536 0.958876 GTTTGGGAGCCCGGTTGTAG 60.959 60.000 0.00 0.00 39.42 2.74
536 537 1.128809 TTTGGGAGCCCGGTTGTAGA 61.129 55.000 0.00 0.00 39.42 2.59
537 538 0.912487 TTGGGAGCCCGGTTGTAGAT 60.912 55.000 0.00 0.00 39.42 1.98
538 539 1.146263 GGGAGCCCGGTTGTAGATG 59.854 63.158 0.00 0.00 0.00 2.90
539 540 1.523938 GGAGCCCGGTTGTAGATGC 60.524 63.158 0.00 0.00 0.00 3.91
540 541 1.522569 GAGCCCGGTTGTAGATGCT 59.477 57.895 0.00 0.00 0.00 3.79
541 542 0.811616 GAGCCCGGTTGTAGATGCTG 60.812 60.000 0.00 0.00 0.00 4.41
542 543 1.078426 GCCCGGTTGTAGATGCTGT 60.078 57.895 0.00 0.00 0.00 4.40
543 544 0.177141 GCCCGGTTGTAGATGCTGTA 59.823 55.000 0.00 0.00 0.00 2.74
544 545 1.806623 GCCCGGTTGTAGATGCTGTAG 60.807 57.143 0.00 0.00 0.00 2.74
545 546 1.202533 CCCGGTTGTAGATGCTGTAGG 60.203 57.143 0.00 0.00 0.00 3.18
546 547 1.480954 CCGGTTGTAGATGCTGTAGGT 59.519 52.381 0.00 0.00 0.00 3.08
547 548 2.691526 CCGGTTGTAGATGCTGTAGGTA 59.308 50.000 0.00 0.00 0.00 3.08
548 549 3.321111 CCGGTTGTAGATGCTGTAGGTAT 59.679 47.826 0.00 0.00 0.00 2.73
549 550 4.521639 CCGGTTGTAGATGCTGTAGGTATA 59.478 45.833 0.00 0.00 0.00 1.47
550 551 5.458891 CGGTTGTAGATGCTGTAGGTATAC 58.541 45.833 0.00 0.00 0.00 1.47
551 552 5.241064 CGGTTGTAGATGCTGTAGGTATACT 59.759 44.000 2.25 0.00 32.75 2.12
552 553 6.448006 GGTTGTAGATGCTGTAGGTATACTG 58.552 44.000 2.25 0.00 34.80 2.74
553 554 6.040616 GGTTGTAGATGCTGTAGGTATACTGT 59.959 42.308 2.25 0.00 34.33 3.55
554 555 7.230108 GGTTGTAGATGCTGTAGGTATACTGTA 59.770 40.741 2.25 0.00 34.33 2.74
555 556 8.794553 GTTGTAGATGCTGTAGGTATACTGTAT 58.205 37.037 5.53 5.53 38.34 2.29
575 576 6.781138 TGTATGTTCTTTTGTGAGTTGTGAC 58.219 36.000 0.00 0.00 0.00 3.67
577 578 5.895636 TGTTCTTTTGTGAGTTGTGACAT 57.104 34.783 0.00 0.00 0.00 3.06
579 580 7.015226 TGTTCTTTTGTGAGTTGTGACATAG 57.985 36.000 0.00 0.00 0.00 2.23
580 581 5.673337 TCTTTTGTGAGTTGTGACATAGC 57.327 39.130 0.00 0.00 0.00 2.97
583 584 1.270041 TGTGAGTTGTGACATAGCGCA 60.270 47.619 11.47 0.00 0.00 6.09
613 614 2.010817 GTCAAAGCTGCGTTTGCCG 61.011 57.895 15.22 0.02 41.78 5.69
624 626 1.781025 CGTTTGCCGAACTCCTGCAA 61.781 55.000 0.00 0.00 42.77 4.08
625 627 0.317854 GTTTGCCGAACTCCTGCAAC 60.318 55.000 0.00 0.00 44.02 4.17
700 703 1.135402 CCAAAGGCCATCGTGTAAAGC 60.135 52.381 5.01 0.00 0.00 3.51
702 705 4.637771 GGCCATCGTGTAAAGCCT 57.362 55.556 0.00 0.00 40.57 4.58
712 715 2.094700 CGTGTAAAGCCTACAGAGCTCA 60.095 50.000 17.77 0.00 40.49 4.26
713 716 3.516615 GTGTAAAGCCTACAGAGCTCAG 58.483 50.000 17.77 11.05 40.49 3.35
737 740 2.714871 CGACTCGTCTCGTCGTCGT 61.715 63.158 19.07 3.66 46.56 4.34
739 742 0.023103 GACTCGTCTCGTCGTCGTAC 59.977 60.000 1.33 1.58 38.33 3.67
741 744 1.075425 CTCGTCTCGTCGTCGTACCT 61.075 60.000 1.33 0.00 38.33 3.08
763 1131 0.755327 AAAGCCACGACAAAAGCCCT 60.755 50.000 0.00 0.00 0.00 5.19
770 1138 4.258543 CCACGACAAAAGCCCTAGAATTA 58.741 43.478 0.00 0.00 0.00 1.40
771 1139 4.094442 CCACGACAAAAGCCCTAGAATTAC 59.906 45.833 0.00 0.00 0.00 1.89
807 1179 4.249661 AGAAAGAGAGGAGCGATTCAAAC 58.750 43.478 0.00 0.00 0.00 2.93
828 1200 3.671928 ACTCGTAGTACAAACGCATCAAC 59.328 43.478 14.00 0.00 40.12 3.18
833 1205 0.110678 TACAAACGCATCAACCCCCA 59.889 50.000 0.00 0.00 0.00 4.96
841 1213 1.896755 GCATCAACCCCCAATCCACTT 60.897 52.381 0.00 0.00 0.00 3.16
860 1232 9.911788 ATCCACTTATCAGTTTAGTTCATCAAT 57.088 29.630 0.00 0.00 0.00 2.57
861 1233 9.383519 TCCACTTATCAGTTTAGTTCATCAATC 57.616 33.333 0.00 0.00 0.00 2.67
874 1246 1.069823 CATCAATCCCCTCGTGGAGAG 59.930 57.143 4.76 0.00 46.44 3.20
968 3583 0.191064 TCACTCCACTCCACCCTTCT 59.809 55.000 0.00 0.00 0.00 2.85
1077 3695 3.519930 GCGGACCTCTCCCTCGAC 61.520 72.222 0.00 0.00 31.93 4.20
1244 3865 2.681778 CGCTCCCACTCCACCTCT 60.682 66.667 0.00 0.00 0.00 3.69
1398 5758 1.694696 GGGCTAGGTTCGGAGATCAAT 59.305 52.381 0.00 0.00 35.04 2.57
1482 5842 1.918609 GTCGAGTTCCGCTACATGTTC 59.081 52.381 2.30 0.00 38.37 3.18
1489 5849 0.735978 CCGCTACATGTTCGCAGACA 60.736 55.000 2.30 0.00 34.32 3.41
1626 5986 1.747444 AACTCTGGTGGGTGGATCTT 58.253 50.000 0.00 0.00 0.00 2.40
1714 6074 3.200593 GCGACTGCCATCTGCCTG 61.201 66.667 0.00 0.00 40.16 4.85
1867 6227 0.103208 GACGCTGAATGATCCGGAGT 59.897 55.000 11.34 0.00 0.00 3.85
1924 6285 2.928396 CTGACCCGGGACCCAAGT 60.928 66.667 32.02 0.82 0.00 3.16
2373 6774 1.115467 GGAGAGAAGAAGATGGCCGA 58.885 55.000 0.00 0.00 0.00 5.54
2783 7190 1.073722 CTTGCTCCTTCCTGCCACA 59.926 57.895 0.00 0.00 0.00 4.17
2791 7199 0.307760 CTTCCTGCCACACGAAACAC 59.692 55.000 0.00 0.00 0.00 3.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 3.564027 CAACCGGCGCTCGAATCC 61.564 66.667 17.96 0.00 42.43 3.01
44 45 4.946411 CGAGGTCGGATTCGATCC 57.054 61.111 2.12 4.99 46.94 3.36
58 59 3.883744 AAGAGTGCGCCCAACCGAG 62.884 63.158 4.18 0.00 0.00 4.63
59 60 3.876589 GAAGAGTGCGCCCAACCGA 62.877 63.158 4.18 0.00 0.00 4.69
60 61 3.423154 GAAGAGTGCGCCCAACCG 61.423 66.667 4.18 0.00 0.00 4.44
61 62 3.056328 GGAAGAGTGCGCCCAACC 61.056 66.667 4.18 0.00 0.00 3.77
62 63 3.423154 CGGAAGAGTGCGCCCAAC 61.423 66.667 4.18 0.00 0.00 3.77
63 64 4.697756 CCGGAAGAGTGCGCCCAA 62.698 66.667 4.18 0.00 37.25 4.12
66 67 3.682292 ATTCCCGGAAGAGTGCGCC 62.682 63.158 0.73 0.00 37.25 6.53
67 68 2.125106 ATTCCCGGAAGAGTGCGC 60.125 61.111 0.73 0.00 37.25 6.09
68 69 1.815421 CCATTCCCGGAAGAGTGCG 60.815 63.158 0.73 0.00 38.50 5.34
69 70 2.115291 GCCATTCCCGGAAGAGTGC 61.115 63.158 0.73 2.07 0.00 4.40
70 71 1.815421 CGCCATTCCCGGAAGAGTG 60.815 63.158 0.73 0.00 0.00 3.51
71 72 2.584608 CGCCATTCCCGGAAGAGT 59.415 61.111 0.73 0.00 0.00 3.24
78 79 4.547367 GACCCTCCGCCATTCCCG 62.547 72.222 0.00 0.00 0.00 5.14
79 80 2.757124 ATGACCCTCCGCCATTCCC 61.757 63.158 0.00 0.00 0.00 3.97
80 81 1.526917 CATGACCCTCCGCCATTCC 60.527 63.158 0.00 0.00 0.00 3.01
81 82 2.189499 GCATGACCCTCCGCCATTC 61.189 63.158 0.00 0.00 0.00 2.67
82 83 2.124151 GCATGACCCTCCGCCATT 60.124 61.111 0.00 0.00 0.00 3.16
83 84 3.410628 TGCATGACCCTCCGCCAT 61.411 61.111 0.00 0.00 0.00 4.40
84 85 4.100084 CTGCATGACCCTCCGCCA 62.100 66.667 0.00 0.00 0.00 5.69
85 86 3.785859 TCTGCATGACCCTCCGCC 61.786 66.667 0.00 0.00 0.00 6.13
86 87 2.512515 GTCTGCATGACCCTCCGC 60.513 66.667 0.00 0.00 39.69 5.54
87 88 2.202797 CGTCTGCATGACCCTCCG 60.203 66.667 0.00 0.00 42.49 4.63
88 89 1.153549 GTCGTCTGCATGACCCTCC 60.154 63.158 0.00 0.00 42.49 4.30
89 90 4.504132 GTCGTCTGCATGACCCTC 57.496 61.111 0.00 0.18 42.49 4.30
93 94 1.933853 GGTTATGGTCGTCTGCATGAC 59.066 52.381 0.00 5.56 42.06 3.06
94 95 1.831106 AGGTTATGGTCGTCTGCATGA 59.169 47.619 0.00 0.00 0.00 3.07
95 96 2.205074 GAGGTTATGGTCGTCTGCATG 58.795 52.381 0.00 0.00 0.00 4.06
96 97 1.139058 GGAGGTTATGGTCGTCTGCAT 59.861 52.381 0.00 0.00 0.00 3.96
97 98 0.535335 GGAGGTTATGGTCGTCTGCA 59.465 55.000 0.00 0.00 0.00 4.41
98 99 0.824759 AGGAGGTTATGGTCGTCTGC 59.175 55.000 0.00 0.00 0.00 4.26
99 100 1.471676 GCAGGAGGTTATGGTCGTCTG 60.472 57.143 0.00 0.00 0.00 3.51
100 101 0.824759 GCAGGAGGTTATGGTCGTCT 59.175 55.000 0.00 0.00 0.00 4.18
101 102 0.824759 AGCAGGAGGTTATGGTCGTC 59.175 55.000 0.00 0.00 0.00 4.20
102 103 0.824759 GAGCAGGAGGTTATGGTCGT 59.175 55.000 0.00 0.00 34.60 4.34
103 104 0.105039 GGAGCAGGAGGTTATGGTCG 59.895 60.000 0.00 0.00 43.24 4.79
104 105 0.470341 GGGAGCAGGAGGTTATGGTC 59.530 60.000 0.00 0.00 41.95 4.02
105 106 0.988678 GGGGAGCAGGAGGTTATGGT 60.989 60.000 0.00 0.00 0.00 3.55
106 107 1.839894 GGGGAGCAGGAGGTTATGG 59.160 63.158 0.00 0.00 0.00 2.74
107 108 1.447643 CGGGGAGCAGGAGGTTATG 59.552 63.158 0.00 0.00 0.00 1.90
108 109 3.971894 CGGGGAGCAGGAGGTTAT 58.028 61.111 0.00 0.00 0.00 1.89
129 130 4.208686 CGACTAGGGCAGCGTCCC 62.209 72.222 8.11 8.11 46.93 4.46
130 131 2.491022 ATCGACTAGGGCAGCGTCC 61.491 63.158 0.00 0.00 0.00 4.79
131 132 1.299468 CATCGACTAGGGCAGCGTC 60.299 63.158 0.00 0.00 0.00 5.19
132 133 2.786495 CCATCGACTAGGGCAGCGT 61.786 63.158 0.00 0.00 0.00 5.07
133 134 1.810606 ATCCATCGACTAGGGCAGCG 61.811 60.000 0.00 0.00 0.00 5.18
134 135 0.037790 GATCCATCGACTAGGGCAGC 60.038 60.000 0.00 0.00 0.00 5.25
135 136 1.271934 CTGATCCATCGACTAGGGCAG 59.728 57.143 0.00 0.00 0.00 4.85
136 137 1.332195 CTGATCCATCGACTAGGGCA 58.668 55.000 0.00 0.00 0.00 5.36
137 138 0.605589 CCTGATCCATCGACTAGGGC 59.394 60.000 0.00 0.00 0.00 5.19
138 139 2.166829 CTCCTGATCCATCGACTAGGG 58.833 57.143 0.00 0.00 0.00 3.53
139 140 2.556189 CACTCCTGATCCATCGACTAGG 59.444 54.545 0.00 0.00 0.00 3.02
140 141 2.556189 CCACTCCTGATCCATCGACTAG 59.444 54.545 0.00 0.00 0.00 2.57
141 142 2.091830 ACCACTCCTGATCCATCGACTA 60.092 50.000 0.00 0.00 0.00 2.59
142 143 1.342474 ACCACTCCTGATCCATCGACT 60.342 52.381 0.00 0.00 0.00 4.18
143 144 1.067821 GACCACTCCTGATCCATCGAC 59.932 57.143 0.00 0.00 0.00 4.20
144 145 1.403814 GACCACTCCTGATCCATCGA 58.596 55.000 0.00 0.00 0.00 3.59
145 146 0.031314 CGACCACTCCTGATCCATCG 59.969 60.000 0.00 0.00 0.00 3.84
146 147 0.390860 CCGACCACTCCTGATCCATC 59.609 60.000 0.00 0.00 0.00 3.51
147 148 0.032117 TCCGACCACTCCTGATCCAT 60.032 55.000 0.00 0.00 0.00 3.41
148 149 0.684479 CTCCGACCACTCCTGATCCA 60.684 60.000 0.00 0.00 0.00 3.41
149 150 0.684805 ACTCCGACCACTCCTGATCC 60.685 60.000 0.00 0.00 0.00 3.36
150 151 0.741915 GACTCCGACCACTCCTGATC 59.258 60.000 0.00 0.00 0.00 2.92
151 152 1.032657 CGACTCCGACCACTCCTGAT 61.033 60.000 0.00 0.00 38.22 2.90
152 153 1.674651 CGACTCCGACCACTCCTGA 60.675 63.158 0.00 0.00 38.22 3.86
153 154 1.674651 TCGACTCCGACCACTCCTG 60.675 63.158 0.00 0.00 40.30 3.86
154 155 2.755049 TCGACTCCGACCACTCCT 59.245 61.111 0.00 0.00 40.30 3.69
163 164 0.595588 CTCCTGATCCATCGACTCCG 59.404 60.000 0.00 0.00 37.07 4.63
164 165 1.339610 CACTCCTGATCCATCGACTCC 59.660 57.143 0.00 0.00 0.00 3.85
165 166 1.339610 CCACTCCTGATCCATCGACTC 59.660 57.143 0.00 0.00 0.00 3.36
166 167 1.342474 ACCACTCCTGATCCATCGACT 60.342 52.381 0.00 0.00 0.00 4.18
167 168 1.067821 GACCACTCCTGATCCATCGAC 59.932 57.143 0.00 0.00 0.00 4.20
168 169 1.403814 GACCACTCCTGATCCATCGA 58.596 55.000 0.00 0.00 0.00 3.59
169 170 0.031314 CGACCACTCCTGATCCATCG 59.969 60.000 0.00 0.00 0.00 3.84
170 171 0.390860 CCGACCACTCCTGATCCATC 59.609 60.000 0.00 0.00 0.00 3.51
171 172 0.032117 TCCGACCACTCCTGATCCAT 60.032 55.000 0.00 0.00 0.00 3.41
172 173 0.684479 CTCCGACCACTCCTGATCCA 60.684 60.000 0.00 0.00 0.00 3.41
173 174 0.684805 ACTCCGACCACTCCTGATCC 60.685 60.000 0.00 0.00 0.00 3.36
174 175 0.741915 GACTCCGACCACTCCTGATC 59.258 60.000 0.00 0.00 0.00 2.92
175 176 1.032657 CGACTCCGACCACTCCTGAT 61.033 60.000 0.00 0.00 38.22 2.90
176 177 1.674651 CGACTCCGACCACTCCTGA 60.675 63.158 0.00 0.00 38.22 3.86
177 178 1.674651 TCGACTCCGACCACTCCTG 60.675 63.158 0.00 0.00 40.30 3.86
178 179 2.755049 TCGACTCCGACCACTCCT 59.245 61.111 0.00 0.00 40.30 3.69
188 189 4.593864 GGGCAGCGGATCGACTCC 62.594 72.222 0.00 0.00 41.07 3.85
189 190 4.933064 CGGGCAGCGGATCGACTC 62.933 72.222 0.00 0.00 0.00 3.36
200 201 2.280660 CTCTAGCATGGCGGGCAG 60.281 66.667 10.83 3.65 0.00 4.85
201 202 1.909459 TTTCTCTAGCATGGCGGGCA 61.909 55.000 6.74 6.74 0.00 5.36
202 203 1.153168 TTTCTCTAGCATGGCGGGC 60.153 57.895 0.00 0.00 0.00 6.13
203 204 1.154205 CGTTTCTCTAGCATGGCGGG 61.154 60.000 0.00 0.00 0.00 6.13
204 205 0.179111 TCGTTTCTCTAGCATGGCGG 60.179 55.000 0.00 0.00 0.00 6.13
205 206 1.203928 CTCGTTTCTCTAGCATGGCG 58.796 55.000 0.00 0.00 0.00 5.69
206 207 0.933796 GCTCGTTTCTCTAGCATGGC 59.066 55.000 0.00 0.00 35.34 4.40
207 208 2.593346 AGCTCGTTTCTCTAGCATGG 57.407 50.000 0.00 0.00 37.33 3.66
208 209 3.779759 AGAAGCTCGTTTCTCTAGCATG 58.220 45.455 0.00 0.00 37.33 4.06
209 210 4.202070 GGTAGAAGCTCGTTTCTCTAGCAT 60.202 45.833 12.85 0.00 38.35 3.79
210 211 3.128938 GGTAGAAGCTCGTTTCTCTAGCA 59.871 47.826 12.85 0.00 38.35 3.49
211 212 3.489568 GGGTAGAAGCTCGTTTCTCTAGC 60.490 52.174 10.31 10.31 38.35 3.42
212 213 3.242804 CGGGTAGAAGCTCGTTTCTCTAG 60.243 52.174 0.00 0.00 38.35 2.43
213 214 2.681848 CGGGTAGAAGCTCGTTTCTCTA 59.318 50.000 0.00 0.00 38.35 2.43
214 215 1.473278 CGGGTAGAAGCTCGTTTCTCT 59.527 52.381 0.00 0.00 38.35 3.10
215 216 1.471684 TCGGGTAGAAGCTCGTTTCTC 59.528 52.381 0.00 0.00 38.35 2.87
216 217 1.201880 GTCGGGTAGAAGCTCGTTTCT 59.798 52.381 1.76 1.76 40.39 2.52
217 218 1.626747 GTCGGGTAGAAGCTCGTTTC 58.373 55.000 0.00 0.00 0.00 2.78
218 219 0.245813 GGTCGGGTAGAAGCTCGTTT 59.754 55.000 0.00 0.00 0.00 3.60
219 220 1.888736 GGTCGGGTAGAAGCTCGTT 59.111 57.895 0.00 0.00 0.00 3.85
220 221 2.404995 CGGTCGGGTAGAAGCTCGT 61.405 63.158 0.00 0.00 0.00 4.18
221 222 1.445716 ATCGGTCGGGTAGAAGCTCG 61.446 60.000 0.00 0.00 0.00 5.03
222 223 0.745468 AATCGGTCGGGTAGAAGCTC 59.255 55.000 0.00 0.00 0.00 4.09
223 224 1.955080 CTAATCGGTCGGGTAGAAGCT 59.045 52.381 0.00 0.00 0.00 3.74
224 225 1.602416 GCTAATCGGTCGGGTAGAAGC 60.602 57.143 5.76 0.00 0.00 3.86
225 226 1.000496 GGCTAATCGGTCGGGTAGAAG 60.000 57.143 5.76 0.00 0.00 2.85
226 227 1.035139 GGCTAATCGGTCGGGTAGAA 58.965 55.000 5.76 0.00 0.00 2.10
227 228 0.825010 GGGCTAATCGGTCGGGTAGA 60.825 60.000 5.76 0.00 0.00 2.59
228 229 1.111116 TGGGCTAATCGGTCGGGTAG 61.111 60.000 0.00 0.00 0.00 3.18
229 230 1.076118 TGGGCTAATCGGTCGGGTA 60.076 57.895 0.00 0.00 0.00 3.69
230 231 2.364579 TGGGCTAATCGGTCGGGT 60.365 61.111 0.00 0.00 0.00 5.28
231 232 2.421739 CTGGGCTAATCGGTCGGG 59.578 66.667 0.00 0.00 0.00 5.14
232 233 2.421739 CCTGGGCTAATCGGTCGG 59.578 66.667 0.00 0.00 0.00 4.79
233 234 2.280186 GCCTGGGCTAATCGGTCG 60.280 66.667 4.12 0.00 38.26 4.79
234 235 2.111251 GGCCTGGGCTAATCGGTC 59.889 66.667 13.80 0.00 41.60 4.79
235 236 3.861797 CGGCCTGGGCTAATCGGT 61.862 66.667 18.81 0.00 41.60 4.69
236 237 4.626081 CCGGCCTGGGCTAATCGG 62.626 72.222 18.81 11.45 41.60 4.18
237 238 2.602746 TTTCCGGCCTGGGCTAATCG 62.603 60.000 18.81 6.32 41.60 3.34
238 239 0.178990 ATTTCCGGCCTGGGCTAATC 60.179 55.000 18.81 0.00 41.60 1.75
239 240 0.178990 GATTTCCGGCCTGGGCTAAT 60.179 55.000 18.81 13.92 41.60 1.73
240 241 1.226262 GATTTCCGGCCTGGGCTAA 59.774 57.895 18.81 9.55 41.60 3.09
241 242 2.915869 GATTTCCGGCCTGGGCTA 59.084 61.111 18.81 3.28 41.60 3.93
242 243 4.489771 CGATTTCCGGCCTGGGCT 62.490 66.667 18.81 0.00 41.60 5.19
244 245 2.996168 CTAGCGATTTCCGGCCTGGG 62.996 65.000 12.77 2.00 38.76 4.45
245 246 1.595382 CTAGCGATTTCCGGCCTGG 60.595 63.158 0.00 3.90 39.04 4.45
246 247 0.179084 TTCTAGCGATTTCCGGCCTG 60.179 55.000 0.00 0.00 39.04 4.85
247 248 0.105039 CTTCTAGCGATTTCCGGCCT 59.895 55.000 0.00 0.00 39.04 5.19
248 249 0.880718 CCTTCTAGCGATTTCCGGCC 60.881 60.000 0.00 0.00 39.04 6.13
249 250 0.880718 CCCTTCTAGCGATTTCCGGC 60.881 60.000 0.00 0.00 39.04 6.13
250 251 0.750850 TCCCTTCTAGCGATTTCCGG 59.249 55.000 0.00 0.00 39.04 5.14
251 252 1.870167 GCTCCCTTCTAGCGATTTCCG 60.870 57.143 0.00 0.00 42.21 4.30
252 253 1.414550 AGCTCCCTTCTAGCGATTTCC 59.585 52.381 0.00 0.00 44.87 3.13
253 254 2.869192 CAAGCTCCCTTCTAGCGATTTC 59.131 50.000 0.00 0.00 44.87 2.17
254 255 2.501723 TCAAGCTCCCTTCTAGCGATTT 59.498 45.455 0.00 0.00 44.87 2.17
255 256 2.102252 CTCAAGCTCCCTTCTAGCGATT 59.898 50.000 0.00 0.00 44.87 3.34
256 257 1.686052 CTCAAGCTCCCTTCTAGCGAT 59.314 52.381 0.00 0.00 44.87 4.58
257 258 1.107114 CTCAAGCTCCCTTCTAGCGA 58.893 55.000 0.00 0.00 44.87 4.93
258 259 0.103937 CCTCAAGCTCCCTTCTAGCG 59.896 60.000 0.00 0.00 44.87 4.26
259 260 0.467804 CCCTCAAGCTCCCTTCTAGC 59.532 60.000 0.00 0.00 40.40 3.42
260 261 0.467804 GCCCTCAAGCTCCCTTCTAG 59.532 60.000 0.00 0.00 0.00 2.43
261 262 1.330655 CGCCCTCAAGCTCCCTTCTA 61.331 60.000 0.00 0.00 0.00 2.10
262 263 2.664081 CGCCCTCAAGCTCCCTTCT 61.664 63.158 0.00 0.00 0.00 2.85
263 264 2.124942 CGCCCTCAAGCTCCCTTC 60.125 66.667 0.00 0.00 0.00 3.46
264 265 3.721706 CCGCCCTCAAGCTCCCTT 61.722 66.667 0.00 0.00 0.00 3.95
265 266 4.722535 TCCGCCCTCAAGCTCCCT 62.723 66.667 0.00 0.00 0.00 4.20
266 267 4.475135 GTCCGCCCTCAAGCTCCC 62.475 72.222 0.00 0.00 0.00 4.30
267 268 3.394836 AGTCCGCCCTCAAGCTCC 61.395 66.667 0.00 0.00 0.00 4.70
268 269 2.125350 CAGTCCGCCCTCAAGCTC 60.125 66.667 0.00 0.00 0.00 4.09
269 270 2.177594 CTTCAGTCCGCCCTCAAGCT 62.178 60.000 0.00 0.00 0.00 3.74
270 271 1.743252 CTTCAGTCCGCCCTCAAGC 60.743 63.158 0.00 0.00 0.00 4.01
271 272 0.108424 CTCTTCAGTCCGCCCTCAAG 60.108 60.000 0.00 0.00 0.00 3.02
272 273 1.544825 CCTCTTCAGTCCGCCCTCAA 61.545 60.000 0.00 0.00 0.00 3.02
273 274 1.984570 CCTCTTCAGTCCGCCCTCA 60.985 63.158 0.00 0.00 0.00 3.86
274 275 2.726351 CCCTCTTCAGTCCGCCCTC 61.726 68.421 0.00 0.00 0.00 4.30
275 276 2.537714 ATCCCTCTTCAGTCCGCCCT 62.538 60.000 0.00 0.00 0.00 5.19
276 277 2.066999 ATCCCTCTTCAGTCCGCCC 61.067 63.158 0.00 0.00 0.00 6.13
277 278 1.144936 CATCCCTCTTCAGTCCGCC 59.855 63.158 0.00 0.00 0.00 6.13
278 279 1.522580 GCATCCCTCTTCAGTCCGC 60.523 63.158 0.00 0.00 0.00 5.54
279 280 1.144936 GGCATCCCTCTTCAGTCCG 59.855 63.158 0.00 0.00 0.00 4.79
280 281 1.794714 TAGGCATCCCTCTTCAGTCC 58.205 55.000 0.00 0.00 41.75 3.85
281 282 3.914426 TTTAGGCATCCCTCTTCAGTC 57.086 47.619 0.00 0.00 41.75 3.51
282 283 4.870021 ATTTTAGGCATCCCTCTTCAGT 57.130 40.909 0.00 0.00 41.75 3.41
283 284 5.653769 TCAAATTTTAGGCATCCCTCTTCAG 59.346 40.000 0.00 0.00 41.75 3.02
284 285 5.579047 TCAAATTTTAGGCATCCCTCTTCA 58.421 37.500 0.00 0.00 41.75 3.02
285 286 6.239148 GGATCAAATTTTAGGCATCCCTCTTC 60.239 42.308 0.00 0.00 41.75 2.87
286 287 5.600069 GGATCAAATTTTAGGCATCCCTCTT 59.400 40.000 0.00 0.00 41.75 2.85
287 288 5.103344 AGGATCAAATTTTAGGCATCCCTCT 60.103 40.000 0.00 0.00 41.75 3.69
288 289 5.143369 AGGATCAAATTTTAGGCATCCCTC 58.857 41.667 0.00 0.00 41.75 4.30
289 290 5.148225 AGGATCAAATTTTAGGCATCCCT 57.852 39.130 0.00 0.00 45.61 4.20
290 291 6.306987 TCTAGGATCAAATTTTAGGCATCCC 58.693 40.000 0.00 0.00 31.68 3.85
291 292 7.576477 GCATCTAGGATCAAATTTTAGGCATCC 60.576 40.741 0.00 0.00 0.00 3.51
292 293 7.311408 GCATCTAGGATCAAATTTTAGGCATC 58.689 38.462 0.00 0.00 0.00 3.91
293 294 6.072286 CGCATCTAGGATCAAATTTTAGGCAT 60.072 38.462 0.00 0.00 0.00 4.40
294 295 5.239306 CGCATCTAGGATCAAATTTTAGGCA 59.761 40.000 0.00 0.00 0.00 4.75
295 296 5.335191 CCGCATCTAGGATCAAATTTTAGGC 60.335 44.000 0.00 0.00 0.00 3.93
296 297 5.997746 TCCGCATCTAGGATCAAATTTTAGG 59.002 40.000 0.00 0.00 31.86 2.69
297 298 7.388776 TCATCCGCATCTAGGATCAAATTTTAG 59.611 37.037 0.00 0.00 46.04 1.85
298 299 7.223584 TCATCCGCATCTAGGATCAAATTTTA 58.776 34.615 0.00 0.00 46.04 1.52
299 300 6.064060 TCATCCGCATCTAGGATCAAATTTT 58.936 36.000 0.00 0.00 46.04 1.82
300 301 5.624159 TCATCCGCATCTAGGATCAAATTT 58.376 37.500 0.00 0.00 46.04 1.82
301 302 5.012458 TCTCATCCGCATCTAGGATCAAATT 59.988 40.000 0.00 0.00 46.04 1.82
302 303 4.529769 TCTCATCCGCATCTAGGATCAAAT 59.470 41.667 0.00 0.00 46.04 2.32
303 304 3.897505 TCTCATCCGCATCTAGGATCAAA 59.102 43.478 0.00 0.00 46.04 2.69
304 305 3.500343 TCTCATCCGCATCTAGGATCAA 58.500 45.455 0.00 0.00 46.04 2.57
305 306 3.160679 TCTCATCCGCATCTAGGATCA 57.839 47.619 0.00 0.00 46.04 2.92
306 307 3.671971 CGTTCTCATCCGCATCTAGGATC 60.672 52.174 0.00 0.00 46.04 3.36
308 309 1.609072 CGTTCTCATCCGCATCTAGGA 59.391 52.381 0.00 0.00 42.69 2.94
309 310 1.609072 TCGTTCTCATCCGCATCTAGG 59.391 52.381 0.00 0.00 0.00 3.02
310 311 3.355626 TTCGTTCTCATCCGCATCTAG 57.644 47.619 0.00 0.00 0.00 2.43
311 312 5.644977 ATATTCGTTCTCATCCGCATCTA 57.355 39.130 0.00 0.00 0.00 1.98
312 313 2.898729 ATTCGTTCTCATCCGCATCT 57.101 45.000 0.00 0.00 0.00 2.90
313 314 7.115520 CCATATATATTCGTTCTCATCCGCATC 59.884 40.741 0.00 0.00 0.00 3.91
314 315 6.925718 CCATATATATTCGTTCTCATCCGCAT 59.074 38.462 0.00 0.00 0.00 4.73
315 316 6.096282 TCCATATATATTCGTTCTCATCCGCA 59.904 38.462 0.00 0.00 0.00 5.69
316 317 6.504398 TCCATATATATTCGTTCTCATCCGC 58.496 40.000 0.00 0.00 0.00 5.54
317 318 7.708051 ACTCCATATATATTCGTTCTCATCCG 58.292 38.462 0.00 0.00 0.00 4.18
318 319 7.858382 CGACTCCATATATATTCGTTCTCATCC 59.142 40.741 6.44 0.00 0.00 3.51
319 320 8.613482 TCGACTCCATATATATTCGTTCTCATC 58.387 37.037 12.11 0.00 0.00 2.92
320 321 8.507524 TCGACTCCATATATATTCGTTCTCAT 57.492 34.615 12.11 0.00 0.00 2.90
321 322 7.065923 CCTCGACTCCATATATATTCGTTCTCA 59.934 40.741 12.11 0.00 0.00 3.27
322 323 7.066043 ACCTCGACTCCATATATATTCGTTCTC 59.934 40.741 12.11 0.00 0.00 2.87
323 324 6.885376 ACCTCGACTCCATATATATTCGTTCT 59.115 38.462 12.11 0.00 0.00 3.01
324 325 6.967767 CACCTCGACTCCATATATATTCGTTC 59.032 42.308 12.11 0.04 0.00 3.95
325 326 6.127703 CCACCTCGACTCCATATATATTCGTT 60.128 42.308 12.11 0.21 0.00 3.85
326 327 5.357314 CCACCTCGACTCCATATATATTCGT 59.643 44.000 12.11 2.48 0.00 3.85
327 328 5.221067 CCCACCTCGACTCCATATATATTCG 60.221 48.000 7.83 7.83 0.00 3.34
328 329 5.892119 TCCCACCTCGACTCCATATATATTC 59.108 44.000 0.00 0.00 0.00 1.75
329 330 5.657302 GTCCCACCTCGACTCCATATATATT 59.343 44.000 0.00 0.00 0.00 1.28
330 331 5.202004 GTCCCACCTCGACTCCATATATAT 58.798 45.833 0.00 0.00 0.00 0.86
331 332 4.043686 TGTCCCACCTCGACTCCATATATA 59.956 45.833 0.00 0.00 0.00 0.86
332 333 3.181422 TGTCCCACCTCGACTCCATATAT 60.181 47.826 0.00 0.00 0.00 0.86
333 334 2.176148 TGTCCCACCTCGACTCCATATA 59.824 50.000 0.00 0.00 0.00 0.86
334 335 1.063190 TGTCCCACCTCGACTCCATAT 60.063 52.381 0.00 0.00 0.00 1.78
335 336 0.333652 TGTCCCACCTCGACTCCATA 59.666 55.000 0.00 0.00 0.00 2.74
336 337 0.544357 TTGTCCCACCTCGACTCCAT 60.544 55.000 0.00 0.00 0.00 3.41
337 338 1.152419 TTGTCCCACCTCGACTCCA 60.152 57.895 0.00 0.00 0.00 3.86
338 339 1.292541 GTTGTCCCACCTCGACTCC 59.707 63.158 0.00 0.00 0.00 3.85
339 340 1.080705 CGTTGTCCCACCTCGACTC 60.081 63.158 0.00 0.00 0.00 3.36
340 341 1.831286 ACGTTGTCCCACCTCGACT 60.831 57.895 0.00 0.00 0.00 4.18
341 342 1.663702 CACGTTGTCCCACCTCGAC 60.664 63.158 0.00 0.00 0.00 4.20
342 343 2.732016 CACGTTGTCCCACCTCGA 59.268 61.111 0.00 0.00 0.00 4.04
343 344 2.357034 CCACGTTGTCCCACCTCG 60.357 66.667 0.00 0.00 0.00 4.63
344 345 2.032071 CCCACGTTGTCCCACCTC 59.968 66.667 0.00 0.00 0.00 3.85
345 346 4.265056 GCCCACGTTGTCCCACCT 62.265 66.667 0.00 0.00 0.00 4.00
346 347 2.798148 CTAGCCCACGTTGTCCCACC 62.798 65.000 0.00 0.00 0.00 4.61
347 348 1.375523 CTAGCCCACGTTGTCCCAC 60.376 63.158 0.00 0.00 0.00 4.61
348 349 0.907704 ATCTAGCCCACGTTGTCCCA 60.908 55.000 0.00 0.00 0.00 4.37
349 350 0.179081 GATCTAGCCCACGTTGTCCC 60.179 60.000 0.00 0.00 0.00 4.46
350 351 0.824759 AGATCTAGCCCACGTTGTCC 59.175 55.000 0.00 0.00 0.00 4.02
351 352 1.476891 TCAGATCTAGCCCACGTTGTC 59.523 52.381 0.00 0.00 0.00 3.18
352 353 1.204941 GTCAGATCTAGCCCACGTTGT 59.795 52.381 0.00 0.00 0.00 3.32
353 354 1.204704 TGTCAGATCTAGCCCACGTTG 59.795 52.381 0.00 0.00 0.00 4.10
354 355 1.557099 TGTCAGATCTAGCCCACGTT 58.443 50.000 0.00 0.00 0.00 3.99
355 356 1.410517 CATGTCAGATCTAGCCCACGT 59.589 52.381 0.00 0.00 0.00 4.49
356 357 1.683385 TCATGTCAGATCTAGCCCACG 59.317 52.381 0.00 0.00 0.00 4.94
357 358 2.544694 CGTCATGTCAGATCTAGCCCAC 60.545 54.545 0.00 0.00 0.00 4.61
358 359 1.683385 CGTCATGTCAGATCTAGCCCA 59.317 52.381 0.00 0.00 0.00 5.36
359 360 1.000283 CCGTCATGTCAGATCTAGCCC 60.000 57.143 0.00 0.00 0.00 5.19
360 361 1.957177 TCCGTCATGTCAGATCTAGCC 59.043 52.381 0.00 0.00 0.00 3.93
361 362 3.573598 CATCCGTCATGTCAGATCTAGC 58.426 50.000 0.00 0.00 0.00 3.42
362 363 3.573598 GCATCCGTCATGTCAGATCTAG 58.426 50.000 0.00 0.00 34.56 2.43
363 364 2.030805 CGCATCCGTCATGTCAGATCTA 60.031 50.000 0.00 0.00 34.56 1.98
364 365 1.269465 CGCATCCGTCATGTCAGATCT 60.269 52.381 0.00 0.00 34.56 2.75
365 366 1.135046 CGCATCCGTCATGTCAGATC 58.865 55.000 0.00 0.00 34.56 2.75
366 367 0.461548 ACGCATCCGTCATGTCAGAT 59.538 50.000 0.00 0.00 46.39 2.90
367 368 0.458370 CACGCATCCGTCATGTCAGA 60.458 55.000 0.00 0.00 46.39 3.27
368 369 2.001357 CACGCATCCGTCATGTCAG 58.999 57.895 0.00 0.00 46.39 3.51
369 370 2.100031 GCACGCATCCGTCATGTCA 61.100 57.895 0.00 0.00 46.39 3.58
370 371 2.703409 GCACGCATCCGTCATGTC 59.297 61.111 0.00 0.00 46.39 3.06
371 372 3.188100 CGCACGCATCCGTCATGT 61.188 61.111 0.00 0.00 46.39 3.21
372 373 4.580044 GCGCACGCATCCGTCATG 62.580 66.667 10.65 0.00 46.39 3.07
408 409 0.460311 ACGTCCAGCCGAAATCTAGG 59.540 55.000 0.00 0.00 0.00 3.02
409 410 1.134367 TCACGTCCAGCCGAAATCTAG 59.866 52.381 0.00 0.00 0.00 2.43
410 411 1.179152 TCACGTCCAGCCGAAATCTA 58.821 50.000 0.00 0.00 0.00 1.98
411 412 0.537188 ATCACGTCCAGCCGAAATCT 59.463 50.000 0.00 0.00 0.00 2.40
412 413 1.369625 AATCACGTCCAGCCGAAATC 58.630 50.000 0.00 0.00 0.00 2.17
413 414 2.277084 GTAATCACGTCCAGCCGAAAT 58.723 47.619 0.00 0.00 0.00 2.17
414 415 1.673626 GGTAATCACGTCCAGCCGAAA 60.674 52.381 0.00 0.00 0.00 3.46
415 416 0.108520 GGTAATCACGTCCAGCCGAA 60.109 55.000 0.00 0.00 0.00 4.30
416 417 1.514087 GGTAATCACGTCCAGCCGA 59.486 57.895 0.00 0.00 0.00 5.54
417 418 1.520787 GGGTAATCACGTCCAGCCG 60.521 63.158 0.00 0.00 0.00 5.52
418 419 1.153229 GGGGTAATCACGTCCAGCC 60.153 63.158 0.00 0.00 0.00 4.85
419 420 0.180406 ATGGGGTAATCACGTCCAGC 59.820 55.000 0.00 0.00 33.85 4.85
420 421 2.432874 TGTATGGGGTAATCACGTCCAG 59.567 50.000 0.00 0.00 33.85 3.86
421 422 2.168936 GTGTATGGGGTAATCACGTCCA 59.831 50.000 0.00 0.00 34.53 4.02
422 423 2.484241 GGTGTATGGGGTAATCACGTCC 60.484 54.545 0.00 0.00 0.00 4.79
423 424 2.433239 AGGTGTATGGGGTAATCACGTC 59.567 50.000 0.00 0.00 0.00 4.34
424 425 2.474112 AGGTGTATGGGGTAATCACGT 58.526 47.619 0.00 0.00 0.00 4.49
425 426 3.006537 CCTAGGTGTATGGGGTAATCACG 59.993 52.174 0.00 0.00 0.00 4.35
426 427 3.326880 CCCTAGGTGTATGGGGTAATCAC 59.673 52.174 8.29 0.00 36.25 3.06
427 428 3.593942 CCCTAGGTGTATGGGGTAATCA 58.406 50.000 8.29 0.00 36.25 2.57
428 429 2.305052 GCCCTAGGTGTATGGGGTAATC 59.695 54.545 8.29 0.00 42.87 1.75
429 430 2.345560 GCCCTAGGTGTATGGGGTAAT 58.654 52.381 8.29 0.00 42.87 1.89
430 431 1.696639 GGCCCTAGGTGTATGGGGTAA 60.697 57.143 8.29 0.00 42.87 2.85
431 432 0.104830 GGCCCTAGGTGTATGGGGTA 60.105 60.000 8.29 0.00 42.87 3.69
432 433 1.385489 GGCCCTAGGTGTATGGGGT 60.385 63.158 8.29 0.00 42.87 4.95
433 434 2.516888 CGGCCCTAGGTGTATGGGG 61.517 68.421 8.29 0.00 43.75 4.96
434 435 2.516888 CCGGCCCTAGGTGTATGGG 61.517 68.421 8.29 0.00 43.62 4.00
435 436 0.470456 TACCGGCCCTAGGTGTATGG 60.470 60.000 10.81 4.71 42.83 2.74
436 437 0.677842 GTACCGGCCCTAGGTGTATG 59.322 60.000 10.81 0.00 42.83 2.39
437 438 0.825010 CGTACCGGCCCTAGGTGTAT 60.825 60.000 10.81 0.00 42.83 2.29
438 439 1.453745 CGTACCGGCCCTAGGTGTA 60.454 63.158 10.81 1.01 42.83 2.90
439 440 2.757099 CGTACCGGCCCTAGGTGT 60.757 66.667 10.81 2.00 42.83 4.16
440 441 2.757099 ACGTACCGGCCCTAGGTG 60.757 66.667 10.81 0.05 42.83 4.00
441 442 2.757099 CACGTACCGGCCCTAGGT 60.757 66.667 8.29 6.05 45.28 3.08
442 443 2.440796 TCACGTACCGGCCCTAGG 60.441 66.667 0.00 0.06 0.00 3.02
443 444 2.803479 GTCACGTACCGGCCCTAG 59.197 66.667 0.00 0.00 0.00 3.02
444 445 3.133464 CGTCACGTACCGGCCCTA 61.133 66.667 0.00 0.00 0.00 3.53
446 447 4.783734 GACGTCACGTACCGGCCC 62.784 72.222 11.55 0.00 41.37 5.80
448 449 3.989566 CTCGACGTCACGTACCGGC 62.990 68.421 17.16 6.42 41.37 6.13
449 450 2.097160 CTCGACGTCACGTACCGG 59.903 66.667 17.16 0.00 41.37 5.28
450 451 1.225583 GACTCGACGTCACGTACCG 60.226 63.158 17.16 3.44 41.37 4.02
451 452 1.225583 CGACTCGACGTCACGTACC 60.226 63.158 17.16 0.00 41.37 3.34
452 453 1.225583 CCGACTCGACGTCACGTAC 60.226 63.158 17.16 0.00 41.37 3.67
453 454 0.943835 TTCCGACTCGACGTCACGTA 60.944 55.000 17.16 0.00 41.37 3.57
454 455 1.572085 ATTCCGACTCGACGTCACGT 61.572 55.000 17.16 0.09 45.10 4.49
455 456 0.453950 AATTCCGACTCGACGTCACG 60.454 55.000 17.16 14.16 42.98 4.35
456 457 0.982673 CAATTCCGACTCGACGTCAC 59.017 55.000 17.16 2.84 42.98 3.67
457 458 0.594602 ACAATTCCGACTCGACGTCA 59.405 50.000 17.16 1.87 42.98 4.35
458 459 0.982673 CACAATTCCGACTCGACGTC 59.017 55.000 5.18 5.18 39.33 4.34
459 460 0.313043 ACACAATTCCGACTCGACGT 59.687 50.000 0.00 0.00 0.00 4.34
460 461 0.708370 CACACAATTCCGACTCGACG 59.292 55.000 0.00 0.00 0.00 5.12
461 462 1.719780 GTCACACAATTCCGACTCGAC 59.280 52.381 0.00 0.00 0.00 4.20
462 463 1.336517 GGTCACACAATTCCGACTCGA 60.337 52.381 0.00 0.00 0.00 4.04
463 464 1.068474 GGTCACACAATTCCGACTCG 58.932 55.000 0.00 0.00 0.00 4.18
464 465 1.068474 CGGTCACACAATTCCGACTC 58.932 55.000 0.00 0.00 44.86 3.36
465 466 0.320421 CCGGTCACACAATTCCGACT 60.320 55.000 2.78 0.00 44.86 4.18
466 467 0.601841 ACCGGTCACACAATTCCGAC 60.602 55.000 0.00 0.00 44.86 4.79
467 468 0.601576 CACCGGTCACACAATTCCGA 60.602 55.000 2.59 0.00 44.86 4.55
468 469 0.601576 TCACCGGTCACACAATTCCG 60.602 55.000 2.59 0.00 42.22 4.30
469 470 1.156736 CTCACCGGTCACACAATTCC 58.843 55.000 2.59 0.00 0.00 3.01
470 471 1.878953 ACTCACCGGTCACACAATTC 58.121 50.000 2.59 0.00 0.00 2.17
471 472 2.549349 GGTACTCACCGGTCACACAATT 60.549 50.000 2.59 0.00 34.36 2.32
472 473 1.001633 GGTACTCACCGGTCACACAAT 59.998 52.381 2.59 0.00 34.36 2.71
473 474 0.390124 GGTACTCACCGGTCACACAA 59.610 55.000 2.59 0.00 34.36 3.33
474 475 2.043625 GGTACTCACCGGTCACACA 58.956 57.895 2.59 0.00 34.36 3.72
475 476 4.981415 GGTACTCACCGGTCACAC 57.019 61.111 2.59 0.00 34.36 3.82
483 484 0.462047 CGAATGGCCTGGTACTCACC 60.462 60.000 3.32 0.00 46.00 4.02
484 485 1.090052 GCGAATGGCCTGGTACTCAC 61.090 60.000 3.32 0.00 34.80 3.51
485 486 1.220749 GCGAATGGCCTGGTACTCA 59.779 57.895 3.32 0.00 34.80 3.41
486 487 1.883084 CGCGAATGGCCTGGTACTC 60.883 63.158 0.00 0.00 38.94 2.59
487 488 2.186903 CGCGAATGGCCTGGTACT 59.813 61.111 0.00 0.00 38.94 2.73
488 489 3.573491 GCGCGAATGGCCTGGTAC 61.573 66.667 12.10 0.00 38.94 3.34
505 506 4.789123 CCCAAACCCCTACGCCCG 62.789 72.222 0.00 0.00 0.00 6.13
506 507 3.332385 TCCCAAACCCCTACGCCC 61.332 66.667 0.00 0.00 0.00 6.13
507 508 2.271173 CTCCCAAACCCCTACGCC 59.729 66.667 0.00 0.00 0.00 5.68
508 509 2.437895 GCTCCCAAACCCCTACGC 60.438 66.667 0.00 0.00 0.00 4.42
509 510 2.271173 GGCTCCCAAACCCCTACG 59.729 66.667 0.00 0.00 0.00 3.51
510 511 2.681591 GGGCTCCCAAACCCCTAC 59.318 66.667 0.00 0.00 40.56 3.18
511 512 3.012722 CGGGCTCCCAAACCCCTA 61.013 66.667 5.70 0.00 43.86 3.53
514 515 4.295199 AACCGGGCTCCCAAACCC 62.295 66.667 6.32 0.00 43.25 4.11
515 516 2.414658 TACAACCGGGCTCCCAAACC 62.415 60.000 6.32 0.00 35.37 3.27
516 517 0.958876 CTACAACCGGGCTCCCAAAC 60.959 60.000 6.32 0.00 35.37 2.93
517 518 1.128809 TCTACAACCGGGCTCCCAAA 61.129 55.000 6.32 0.00 35.37 3.28
518 519 0.912487 ATCTACAACCGGGCTCCCAA 60.912 55.000 6.32 0.00 35.37 4.12
519 520 1.306654 ATCTACAACCGGGCTCCCA 60.307 57.895 6.32 0.00 35.37 4.37
520 521 1.146263 CATCTACAACCGGGCTCCC 59.854 63.158 6.32 0.00 0.00 4.30
521 522 1.523938 GCATCTACAACCGGGCTCC 60.524 63.158 6.32 0.00 0.00 4.70
522 523 0.811616 CAGCATCTACAACCGGGCTC 60.812 60.000 6.32 0.00 0.00 4.70
523 524 1.221840 CAGCATCTACAACCGGGCT 59.778 57.895 6.32 0.00 0.00 5.19
524 525 0.177141 TACAGCATCTACAACCGGGC 59.823 55.000 6.32 0.00 0.00 6.13
525 526 1.202533 CCTACAGCATCTACAACCGGG 60.203 57.143 6.32 0.00 0.00 5.73
526 527 1.480954 ACCTACAGCATCTACAACCGG 59.519 52.381 0.00 0.00 0.00 5.28
527 528 2.961526 ACCTACAGCATCTACAACCG 57.038 50.000 0.00 0.00 0.00 4.44
528 529 6.040616 ACAGTATACCTACAGCATCTACAACC 59.959 42.308 0.00 0.00 0.00 3.77
529 530 7.040473 ACAGTATACCTACAGCATCTACAAC 57.960 40.000 0.00 0.00 0.00 3.32
530 531 8.793592 CATACAGTATACCTACAGCATCTACAA 58.206 37.037 0.00 0.00 0.00 2.41
531 532 7.942894 ACATACAGTATACCTACAGCATCTACA 59.057 37.037 0.00 0.00 0.00 2.74
532 533 8.338072 ACATACAGTATACCTACAGCATCTAC 57.662 38.462 0.00 0.00 0.00 2.59
533 534 8.935614 AACATACAGTATACCTACAGCATCTA 57.064 34.615 0.00 0.00 0.00 1.98
534 535 7.726291 AGAACATACAGTATACCTACAGCATCT 59.274 37.037 0.00 0.00 0.00 2.90
535 536 7.887381 AGAACATACAGTATACCTACAGCATC 58.113 38.462 0.00 0.00 0.00 3.91
536 537 7.841282 AGAACATACAGTATACCTACAGCAT 57.159 36.000 0.00 0.00 0.00 3.79
537 538 7.655521 AAGAACATACAGTATACCTACAGCA 57.344 36.000 0.00 0.00 0.00 4.41
538 539 8.818057 CAAAAGAACATACAGTATACCTACAGC 58.182 37.037 0.00 0.00 0.00 4.40
539 540 9.871238 ACAAAAGAACATACAGTATACCTACAG 57.129 33.333 0.00 0.00 0.00 2.74
540 541 9.647797 CACAAAAGAACATACAGTATACCTACA 57.352 33.333 0.00 0.00 0.00 2.74
541 542 9.865321 TCACAAAAGAACATACAGTATACCTAC 57.135 33.333 0.00 0.00 0.00 3.18
543 544 8.594550 ACTCACAAAAGAACATACAGTATACCT 58.405 33.333 0.00 0.00 0.00 3.08
544 545 8.773404 ACTCACAAAAGAACATACAGTATACC 57.227 34.615 0.00 0.00 0.00 2.73
546 547 9.772973 ACAACTCACAAAAGAACATACAGTATA 57.227 29.630 0.00 0.00 0.00 1.47
547 548 8.559536 CACAACTCACAAAAGAACATACAGTAT 58.440 33.333 0.00 0.00 0.00 2.12
548 549 7.766738 TCACAACTCACAAAAGAACATACAGTA 59.233 33.333 0.00 0.00 0.00 2.74
549 550 6.597672 TCACAACTCACAAAAGAACATACAGT 59.402 34.615 0.00 0.00 0.00 3.55
550 551 6.907212 GTCACAACTCACAAAAGAACATACAG 59.093 38.462 0.00 0.00 0.00 2.74
551 552 6.372937 TGTCACAACTCACAAAAGAACATACA 59.627 34.615 0.00 0.00 0.00 2.29
552 553 6.781138 TGTCACAACTCACAAAAGAACATAC 58.219 36.000 0.00 0.00 0.00 2.39
553 554 6.993786 TGTCACAACTCACAAAAGAACATA 57.006 33.333 0.00 0.00 0.00 2.29
554 555 5.895636 TGTCACAACTCACAAAAGAACAT 57.104 34.783 0.00 0.00 0.00 2.71
555 556 5.895636 ATGTCACAACTCACAAAAGAACA 57.104 34.783 0.00 0.00 0.00 3.18
579 580 3.615536 GACCAACACAGCCATGCGC 62.616 63.158 0.00 0.00 37.98 6.09
580 581 1.794151 TTGACCAACACAGCCATGCG 61.794 55.000 0.00 0.00 0.00 4.73
583 584 0.675633 GCTTTGACCAACACAGCCAT 59.324 50.000 0.00 0.00 43.87 4.40
593 594 1.065600 GCAAACGCAGCTTTGACCA 59.934 52.632 16.83 0.00 32.92 4.02
594 595 1.661509 GGCAAACGCAGCTTTGACC 60.662 57.895 16.83 13.76 32.91 4.02
613 614 1.891919 TGGTGCGTTGCAGGAGTTC 60.892 57.895 0.00 0.00 40.08 3.01
655 657 1.890041 CCGTTTTGGTGTCTGCGGA 60.890 57.895 0.00 0.00 41.45 5.54
700 703 1.135257 CGTTGGACTGAGCTCTGTAGG 60.135 57.143 24.27 12.09 0.00 3.18
702 705 1.540267 GTCGTTGGACTGAGCTCTGTA 59.460 52.381 24.27 9.00 40.15 2.74
713 716 4.436653 CGAGACGAGTCGTTGGAC 57.563 61.111 20.91 6.82 41.37 4.02
737 740 0.179043 TTGTCGTGGCTTTGCAGGTA 60.179 50.000 0.00 0.00 0.00 3.08
739 742 0.102120 TTTTGTCGTGGCTTTGCAGG 59.898 50.000 0.00 0.00 0.00 4.85
741 744 0.527385 GCTTTTGTCGTGGCTTTGCA 60.527 50.000 0.00 0.00 0.00 4.08
763 1131 4.811969 TTTCTCCGTGGCAGTAATTCTA 57.188 40.909 0.00 0.00 0.00 2.10
770 1138 2.158813 TCTTTCTTTTCTCCGTGGCAGT 60.159 45.455 0.00 0.00 0.00 4.40
771 1139 2.481952 CTCTTTCTTTTCTCCGTGGCAG 59.518 50.000 0.00 0.00 0.00 4.85
807 1179 3.060363 GGTTGATGCGTTTGTACTACGAG 59.940 47.826 20.25 0.00 41.33 4.18
828 1200 3.669939 AACTGATAAGTGGATTGGGGG 57.330 47.619 0.00 0.00 0.00 5.40
833 1205 9.739276 TTGATGAACTAAACTGATAAGTGGATT 57.261 29.630 0.00 0.00 0.00 3.01
841 1213 7.451731 AGGGGATTGATGAACTAAACTGATA 57.548 36.000 0.00 0.00 0.00 2.15
860 1232 1.305046 GGTTCTCTCCACGAGGGGA 60.305 63.158 0.16 0.16 44.08 4.81
861 1233 2.359967 GGGTTCTCTCCACGAGGGG 61.360 68.421 0.00 0.00 40.30 4.79
874 1246 1.389555 CGCCTAATTTCCAGGGGTTC 58.610 55.000 2.37 0.00 40.36 3.62
1482 5842 4.374702 GTGGCGTGCTTGTCTGCG 62.375 66.667 0.00 0.00 35.36 5.18
1565 5925 0.329596 GTCTCTGCCCCAAATCCAGT 59.670 55.000 0.00 0.00 0.00 4.00
1602 5962 1.152777 CACCCACCAGAGTTTGCCA 60.153 57.895 0.00 0.00 0.00 4.92
1608 5968 0.987294 CAAGATCCACCCACCAGAGT 59.013 55.000 0.00 0.00 0.00 3.24
1753 6113 4.728102 CTGCACGAACCGGCGGTA 62.728 66.667 34.37 14.94 33.12 4.02
1827 6187 1.078214 CATGCTGACCGTCATGGGT 60.078 57.895 0.62 0.00 44.64 4.51
1856 6216 1.343478 ACTCCTTGGACTCCGGATCAT 60.343 52.381 3.57 0.00 0.00 2.45
1924 6285 1.073125 TGCCCCGATGTCTTGAAAGAA 59.927 47.619 0.00 0.00 36.68 2.52
2783 7190 0.468226 TGCTCCTTGAGGTGTTTCGT 59.532 50.000 0.00 0.00 36.34 3.85
2791 7199 1.205893 GTACAGAGGTGCTCCTTGAGG 59.794 57.143 9.08 2.01 45.24 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.