Multiple sequence alignment - TraesCS3B01G193100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G193100 chr3B 100.000 3016 0 0 1 3016 207446938 207449953 0.000000e+00 5570.0
1 TraesCS3B01G193100 chr3B 96.849 857 26 1 1 857 207441397 207442252 0.000000e+00 1432.0
2 TraesCS3B01G193100 chr3B 96.400 861 30 1 1 861 214539718 214538859 0.000000e+00 1417.0
3 TraesCS3B01G193100 chr3A 91.329 1211 51 25 1210 2366 163910032 163911242 0.000000e+00 1605.0
4 TraesCS3B01G193100 chr3A 97.628 253 6 0 2372 2624 163923476 163923728 4.620000e-118 435.0
5 TraesCS3B01G193100 chr3A 89.855 69 6 1 2276 2344 57197747 57197814 1.490000e-13 87.9
6 TraesCS3B01G193100 chr5B 96.616 857 28 1 1 857 203129187 203128332 0.000000e+00 1421.0
7 TraesCS3B01G193100 chr5B 96.149 857 33 0 1 857 597791026 597790170 0.000000e+00 1400.0
8 TraesCS3B01G193100 chr5B 96.149 857 33 0 1 857 597796562 597795706 0.000000e+00 1400.0
9 TraesCS3B01G193100 chr5B 95.804 858 35 1 1 858 258486396 258485540 0.000000e+00 1384.0
10 TraesCS3B01G193100 chr6B 96.051 861 34 0 1 861 129849581 129848721 0.000000e+00 1402.0
11 TraesCS3B01G193100 chr2B 96.149 857 32 1 1 857 71077568 71078423 0.000000e+00 1399.0
12 TraesCS3B01G193100 chr2B 95.921 858 34 1 1 857 237004550 237003693 0.000000e+00 1389.0
13 TraesCS3B01G193100 chr3D 95.189 769 29 1 1053 1813 144249945 144250713 0.000000e+00 1208.0
14 TraesCS3B01G193100 chr3D 94.845 388 17 3 2632 3016 374251247 374251634 1.200000e-168 603.0
15 TraesCS3B01G193100 chr3D 93.830 389 21 2 2631 3016 115642977 115643365 1.560000e-162 582.0
16 TraesCS3B01G193100 chr3D 93.830 389 20 2 2631 3015 546407278 546406890 1.560000e-162 582.0
17 TraesCS3B01G193100 chr3D 93.782 386 22 2 2633 3016 607326566 607326951 2.020000e-161 579.0
18 TraesCS3B01G193100 chr3D 90.385 208 11 1 858 1056 144249705 144249912 6.410000e-67 265.0
19 TraesCS3B01G193100 chr3D 87.903 124 10 5 1956 2077 144250897 144251017 1.130000e-29 141.0
20 TraesCS3B01G193100 chr3D 95.833 72 2 1 2560 2630 144291288 144291359 6.830000e-22 115.0
21 TraesCS3B01G193100 chr7D 95.116 389 17 1 2628 3014 117435573 117435185 1.990000e-171 612.0
22 TraesCS3B01G193100 chr7D 94.560 386 20 1 2632 3016 438546400 438546015 2.000000e-166 595.0
23 TraesCS3B01G193100 chr7D 93.782 386 22 2 2633 3016 38712405 38712020 2.020000e-161 579.0
24 TraesCS3B01G193100 chr7D 91.346 104 8 1 2414 2516 602018482 602018585 1.130000e-29 141.0
25 TraesCS3B01G193100 chr7D 81.481 108 15 5 2164 2269 585605866 585605762 1.930000e-12 84.2
26 TraesCS3B01G193100 chr6D 94.574 387 17 2 2633 3016 314501516 314501131 2.000000e-166 595.0
27 TraesCS3B01G193100 chr5A 94.041 386 20 2 2633 3016 467417929 467417545 1.560000e-162 582.0
28 TraesCS3B01G193100 chr4A 90.826 109 10 0 2408 2516 715931839 715931731 2.420000e-31 147.0
29 TraesCS3B01G193100 chr4A 88.393 112 13 0 2405 2516 715932641 715932752 5.240000e-28 135.0
30 TraesCS3B01G193100 chr4A 75.502 249 29 20 2121 2345 593825882 593826122 3.200000e-15 93.5
31 TraesCS3B01G193100 chr1D 90.179 112 11 0 2405 2516 413734290 413734401 2.420000e-31 147.0
32 TraesCS3B01G193100 chr1D 90.385 104 10 0 2413 2516 120652623 120652520 1.460000e-28 137.0
33 TraesCS3B01G193100 chr4D 90.826 109 9 1 2408 2516 24765320 24765427 8.710000e-31 145.0
34 TraesCS3B01G193100 chr1B 88.288 111 13 0 2408 2518 600709476 600709366 1.890000e-27 134.0
35 TraesCS3B01G193100 chr2A 87.611 113 14 0 2405 2517 692647892 692648004 6.780000e-27 132.0
36 TraesCS3B01G193100 chr6A 87.179 78 7 3 2269 2345 593804619 593804544 5.360000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G193100 chr3B 207446938 207449953 3015 False 5570 5570 100.000 1 3016 1 chr3B.!!$F2 3015
1 TraesCS3B01G193100 chr3B 207441397 207442252 855 False 1432 1432 96.849 1 857 1 chr3B.!!$F1 856
2 TraesCS3B01G193100 chr3B 214538859 214539718 859 True 1417 1417 96.400 1 861 1 chr3B.!!$R1 860
3 TraesCS3B01G193100 chr3A 163910032 163911242 1210 False 1605 1605 91.329 1210 2366 1 chr3A.!!$F2 1156
4 TraesCS3B01G193100 chr5B 203128332 203129187 855 True 1421 1421 96.616 1 857 1 chr5B.!!$R1 856
5 TraesCS3B01G193100 chr5B 597790170 597791026 856 True 1400 1400 96.149 1 857 1 chr5B.!!$R3 856
6 TraesCS3B01G193100 chr5B 597795706 597796562 856 True 1400 1400 96.149 1 857 1 chr5B.!!$R4 856
7 TraesCS3B01G193100 chr5B 258485540 258486396 856 True 1384 1384 95.804 1 858 1 chr5B.!!$R2 857
8 TraesCS3B01G193100 chr6B 129848721 129849581 860 True 1402 1402 96.051 1 861 1 chr6B.!!$R1 860
9 TraesCS3B01G193100 chr2B 71077568 71078423 855 False 1399 1399 96.149 1 857 1 chr2B.!!$F1 856
10 TraesCS3B01G193100 chr2B 237003693 237004550 857 True 1389 1389 95.921 1 857 1 chr2B.!!$R1 856
11 TraesCS3B01G193100 chr3D 144249705 144251017 1312 False 538 1208 91.159 858 2077 3 chr3D.!!$F5 1219

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
892 894 0.315251 TGGCTCTGAACAGACGTCAG 59.685 55.0 19.5 12.96 33.22 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2433 2585 0.034896 ACGTGTTCTTGTGGGCCTAG 59.965 55.0 4.53 0.0 0.0 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
101 102 4.443913 ACGAGGAAGAAGAAGAACTAGC 57.556 45.455 0.00 0.00 0.00 3.42
215 216 1.675641 GCTGGACTTCCCGTGCAAT 60.676 57.895 0.00 0.00 43.71 3.56
278 279 4.689071 GGATTGGTTTTGTCCGAACTTTT 58.311 39.130 0.00 0.00 0.00 2.27
351 352 4.186159 GGTAAACGATCTCGGATGGAAAA 58.814 43.478 4.44 0.00 44.95 2.29
386 387 1.069432 TCTTGACCGTTTCGACGAGAG 60.069 52.381 0.00 0.00 34.64 3.20
469 471 0.618458 AAAACAGGCTATCCCTCGCA 59.382 50.000 0.00 0.00 44.09 5.10
470 472 0.839946 AAACAGGCTATCCCTCGCAT 59.160 50.000 0.00 0.00 44.09 4.73
752 754 1.880027 GACTGCGATGACCCAAACTTT 59.120 47.619 0.00 0.00 0.00 2.66
757 759 3.886505 TGCGATGACCCAAACTTTAAAGT 59.113 39.130 15.22 15.22 42.04 2.66
866 868 0.935196 GGTGTCAACAGACGTTCACC 59.065 55.000 0.00 0.00 40.67 4.02
892 894 0.315251 TGGCTCTGAACAGACGTCAG 59.685 55.000 19.50 12.96 33.22 3.51
894 896 1.667467 GGCTCTGAACAGACGTCAGAC 60.667 57.143 19.50 10.17 35.81 3.51
923 934 2.975851 CGTATATGCGTACTCCCGAAAC 59.024 50.000 4.91 0.00 0.00 2.78
924 935 3.304257 CGTATATGCGTACTCCCGAAACT 60.304 47.826 4.91 0.00 0.00 2.66
933 944 1.298859 CTCCCGAAACTGGAAAGGCG 61.299 60.000 0.00 0.00 0.00 5.52
974 985 1.007336 CGGAGTCGAACCAAACCGAG 61.007 60.000 0.00 0.00 42.40 4.63
999 1010 0.389166 CTCGTCTCCTTGTCCACAGC 60.389 60.000 0.00 0.00 0.00 4.40
1010 1021 4.299155 CTTGTCCACAGCCTACATATACG 58.701 47.826 0.00 0.00 0.00 3.06
1012 1023 2.626743 GTCCACAGCCTACATATACGGT 59.373 50.000 0.00 0.00 0.00 4.83
1056 1067 1.668751 TCGTCGCAAAGCAAACTTTCT 59.331 42.857 0.00 0.00 44.41 2.52
1057 1068 2.036933 CGTCGCAAAGCAAACTTTCTC 58.963 47.619 0.00 0.00 44.41 2.87
1099 1146 1.469335 GGGAAGGGATATGGCGTCGA 61.469 60.000 0.00 0.00 0.00 4.20
1100 1147 0.391597 GGAAGGGATATGGCGTCGAA 59.608 55.000 0.00 0.00 0.00 3.71
1149 1196 4.011517 TGCCGGAGGGACCGTTTC 62.012 66.667 5.05 0.00 44.49 2.78
1156 1203 3.056328 GGGACCGTTTCTGCCAGC 61.056 66.667 0.00 0.00 0.00 4.85
1164 1211 2.488403 TTTCTGCCAGCTTTGCGCA 61.488 52.632 5.66 5.66 42.61 6.09
1194 1241 1.518133 CTCTCACTGCTGCGGCTAC 60.518 63.158 20.27 0.00 39.59 3.58
1385 1432 2.682155 TCGTACTGCATGGCATGTAA 57.318 45.000 26.94 15.54 38.13 2.41
1518 1573 0.907704 AGCCGTGGTTCCCTCACATA 60.908 55.000 0.00 0.00 35.03 2.29
1557 1612 1.833049 GGTCGGTGAGGATCGGGAT 60.833 63.158 0.00 0.00 38.61 3.85
1813 1876 3.589988 GGATGAAGACACTGTCAATCGT 58.410 45.455 11.80 9.98 34.60 3.73
1866 1929 5.464030 ACTAGCTTTGTTCCTCTCGTTTA 57.536 39.130 0.00 0.00 0.00 2.01
1904 1967 5.633830 TCTTTCCAATTCTTGTGATCTGC 57.366 39.130 0.00 0.00 0.00 4.26
1906 1969 5.413833 TCTTTCCAATTCTTGTGATCTGCTC 59.586 40.000 0.00 0.00 0.00 4.26
1942 2006 9.856488 TGGTCGTTCTATAGAAATTATAGATGC 57.144 33.333 16.73 0.16 36.68 3.91
1972 2097 5.335035 CGTTTTTCGGGCTACTAATTTTGGA 60.335 40.000 0.00 0.00 35.71 3.53
2050 2176 5.583854 ACATGTTTCTCCATCTTCATCTTCG 59.416 40.000 0.00 0.00 0.00 3.79
2051 2177 5.152623 TGTTTCTCCATCTTCATCTTCGT 57.847 39.130 0.00 0.00 0.00 3.85
2059 2185 4.092529 CCATCTTCATCTTCGTGTTCACTG 59.907 45.833 1.53 0.00 0.00 3.66
2113 2239 0.394899 GGAGGGCAAGTTCCATGGAG 60.395 60.000 15.53 4.30 33.55 3.86
2119 2245 1.544917 AAGTTCCATGGAGGCCCCT 60.545 57.895 15.53 4.49 37.29 4.79
2133 2259 1.535028 GGCCCCTTTTTGCAAAATTCG 59.465 47.619 24.39 15.28 0.00 3.34
2238 2372 2.250939 TTGAAACGAGGGCTGTGCG 61.251 57.895 0.00 0.00 0.00 5.34
2243 2377 1.507141 AACGAGGGCTGTGCGAAAAG 61.507 55.000 0.00 0.00 0.00 2.27
2244 2378 1.667830 CGAGGGCTGTGCGAAAAGA 60.668 57.895 0.00 0.00 0.00 2.52
2273 2425 9.764363 AAAAGAAATATGAGGTTTTCAAAGTCC 57.236 29.630 0.00 0.00 39.77 3.85
2280 2432 6.790232 TGAGGTTTTCAAAGTCCAGAAATT 57.210 33.333 0.00 0.00 34.10 1.82
2281 2433 7.889873 TGAGGTTTTCAAAGTCCAGAAATTA 57.110 32.000 0.00 0.00 34.10 1.40
2282 2434 8.477419 TGAGGTTTTCAAAGTCCAGAAATTAT 57.523 30.769 0.00 0.00 34.10 1.28
2319 2471 6.266168 TGTCGCATTTCAAGGTATTTCATT 57.734 33.333 0.00 0.00 0.00 2.57
2323 2475 5.745294 CGCATTTCAAGGTATTTCATTCTGG 59.255 40.000 0.00 0.00 0.00 3.86
2366 2518 7.347222 ACATTGACTGTTAGATTAGGGTGGATA 59.653 37.037 0.00 0.00 32.90 2.59
2367 2519 6.978674 TGACTGTTAGATTAGGGTGGATAG 57.021 41.667 0.00 0.00 0.00 2.08
2368 2520 6.679542 TGACTGTTAGATTAGGGTGGATAGA 58.320 40.000 0.00 0.00 0.00 1.98
2369 2521 6.550108 TGACTGTTAGATTAGGGTGGATAGAC 59.450 42.308 0.00 0.00 0.00 2.59
2370 2522 5.535406 ACTGTTAGATTAGGGTGGATAGACG 59.465 44.000 0.00 0.00 0.00 4.18
2371 2523 4.831155 TGTTAGATTAGGGTGGATAGACGG 59.169 45.833 0.00 0.00 0.00 4.79
2372 2524 2.249139 AGATTAGGGTGGATAGACGGC 58.751 52.381 0.00 0.00 0.00 5.68
2373 2525 2.158295 AGATTAGGGTGGATAGACGGCT 60.158 50.000 0.00 0.00 0.00 5.52
2374 2526 1.700955 TTAGGGTGGATAGACGGCTC 58.299 55.000 0.00 0.00 0.00 4.70
2375 2527 0.554305 TAGGGTGGATAGACGGCTCA 59.446 55.000 0.00 0.00 0.00 4.26
2376 2528 0.105453 AGGGTGGATAGACGGCTCAT 60.105 55.000 0.00 0.00 0.00 2.90
2377 2529 1.147191 AGGGTGGATAGACGGCTCATA 59.853 52.381 0.00 0.00 0.00 2.15
2378 2530 1.968493 GGGTGGATAGACGGCTCATAA 59.032 52.381 0.00 0.00 0.00 1.90
2379 2531 2.367567 GGGTGGATAGACGGCTCATAAA 59.632 50.000 0.00 0.00 0.00 1.40
2380 2532 3.181458 GGGTGGATAGACGGCTCATAAAA 60.181 47.826 0.00 0.00 0.00 1.52
2381 2533 4.505039 GGGTGGATAGACGGCTCATAAAAT 60.505 45.833 0.00 0.00 0.00 1.82
2382 2534 4.691216 GGTGGATAGACGGCTCATAAAATC 59.309 45.833 0.00 0.00 0.00 2.17
2383 2535 5.297547 GTGGATAGACGGCTCATAAAATCA 58.702 41.667 0.00 0.00 0.00 2.57
2384 2536 5.177696 GTGGATAGACGGCTCATAAAATCAC 59.822 44.000 0.00 0.00 0.00 3.06
2385 2537 4.691216 GGATAGACGGCTCATAAAATCACC 59.309 45.833 0.00 0.00 0.00 4.02
2386 2538 2.919228 AGACGGCTCATAAAATCACCC 58.081 47.619 0.00 0.00 0.00 4.61
2387 2539 2.238646 AGACGGCTCATAAAATCACCCA 59.761 45.455 0.00 0.00 0.00 4.51
2388 2540 3.117888 AGACGGCTCATAAAATCACCCAT 60.118 43.478 0.00 0.00 0.00 4.00
2389 2541 3.214328 ACGGCTCATAAAATCACCCATC 58.786 45.455 0.00 0.00 0.00 3.51
2390 2542 3.213506 CGGCTCATAAAATCACCCATCA 58.786 45.455 0.00 0.00 0.00 3.07
2391 2543 3.003689 CGGCTCATAAAATCACCCATCAC 59.996 47.826 0.00 0.00 0.00 3.06
2392 2544 3.319122 GGCTCATAAAATCACCCATCACC 59.681 47.826 0.00 0.00 0.00 4.02
2393 2545 3.003689 GCTCATAAAATCACCCATCACCG 59.996 47.826 0.00 0.00 0.00 4.94
2394 2546 4.199310 CTCATAAAATCACCCATCACCGT 58.801 43.478 0.00 0.00 0.00 4.83
2395 2547 5.360649 TCATAAAATCACCCATCACCGTA 57.639 39.130 0.00 0.00 0.00 4.02
2396 2548 5.746284 TCATAAAATCACCCATCACCGTAA 58.254 37.500 0.00 0.00 0.00 3.18
2397 2549 5.587043 TCATAAAATCACCCATCACCGTAAC 59.413 40.000 0.00 0.00 0.00 2.50
2398 2550 3.426787 AAATCACCCATCACCGTAACA 57.573 42.857 0.00 0.00 0.00 2.41
2399 2551 2.691409 ATCACCCATCACCGTAACAG 57.309 50.000 0.00 0.00 0.00 3.16
2400 2552 1.344065 TCACCCATCACCGTAACAGT 58.656 50.000 0.00 0.00 0.00 3.55
2401 2553 1.695242 TCACCCATCACCGTAACAGTT 59.305 47.619 0.00 0.00 0.00 3.16
2402 2554 1.804151 CACCCATCACCGTAACAGTTG 59.196 52.381 0.00 0.00 0.00 3.16
2403 2555 1.418637 ACCCATCACCGTAACAGTTGT 59.581 47.619 0.00 0.00 0.00 3.32
2404 2556 2.633967 ACCCATCACCGTAACAGTTGTA 59.366 45.455 0.00 0.00 0.00 2.41
2405 2557 3.071312 ACCCATCACCGTAACAGTTGTAA 59.929 43.478 0.00 0.00 0.00 2.41
2406 2558 4.258543 CCCATCACCGTAACAGTTGTAAT 58.741 43.478 0.00 0.00 0.00 1.89
2407 2559 5.046448 ACCCATCACCGTAACAGTTGTAATA 60.046 40.000 0.00 0.00 0.00 0.98
2408 2560 5.875910 CCCATCACCGTAACAGTTGTAATAA 59.124 40.000 0.00 0.00 0.00 1.40
2409 2561 6.372103 CCCATCACCGTAACAGTTGTAATAAA 59.628 38.462 0.00 0.00 0.00 1.40
2410 2562 7.066525 CCCATCACCGTAACAGTTGTAATAAAT 59.933 37.037 0.00 0.00 0.00 1.40
2411 2563 8.120465 CCATCACCGTAACAGTTGTAATAAATC 58.880 37.037 0.00 0.00 0.00 2.17
2412 2564 8.661257 CATCACCGTAACAGTTGTAATAAATCA 58.339 33.333 0.00 0.00 0.00 2.57
2413 2565 8.604640 TCACCGTAACAGTTGTAATAAATCAA 57.395 30.769 0.00 0.00 0.00 2.57
2414 2566 9.053840 TCACCGTAACAGTTGTAATAAATCAAA 57.946 29.630 0.00 0.00 0.00 2.69
2415 2567 9.834628 CACCGTAACAGTTGTAATAAATCAAAT 57.165 29.630 0.00 0.00 0.00 2.32
2440 2592 8.747538 TTTAAGTTAATTGAATCTCTAGGCCC 57.252 34.615 0.00 0.00 0.00 5.80
2441 2593 5.975988 AGTTAATTGAATCTCTAGGCCCA 57.024 39.130 0.00 0.00 0.00 5.36
2442 2594 5.685728 AGTTAATTGAATCTCTAGGCCCAC 58.314 41.667 0.00 0.00 0.00 4.61
2443 2595 5.191722 AGTTAATTGAATCTCTAGGCCCACA 59.808 40.000 0.00 0.00 0.00 4.17
2444 2596 4.591321 AATTGAATCTCTAGGCCCACAA 57.409 40.909 0.00 0.00 0.00 3.33
2445 2597 3.634397 TTGAATCTCTAGGCCCACAAG 57.366 47.619 0.00 0.00 0.00 3.16
2446 2598 2.832838 TGAATCTCTAGGCCCACAAGA 58.167 47.619 0.00 0.00 0.00 3.02
2447 2599 3.181329 TGAATCTCTAGGCCCACAAGAA 58.819 45.455 0.00 0.00 0.00 2.52
2448 2600 3.055094 TGAATCTCTAGGCCCACAAGAAC 60.055 47.826 0.00 0.00 0.00 3.01
2449 2601 2.024176 TCTCTAGGCCCACAAGAACA 57.976 50.000 0.00 0.00 0.00 3.18
2450 2602 1.623811 TCTCTAGGCCCACAAGAACAC 59.376 52.381 0.00 0.00 0.00 3.32
2451 2603 0.320374 TCTAGGCCCACAAGAACACG 59.680 55.000 0.00 0.00 0.00 4.49
2452 2604 0.034896 CTAGGCCCACAAGAACACGT 59.965 55.000 0.00 0.00 0.00 4.49
2453 2605 0.250124 TAGGCCCACAAGAACACGTG 60.250 55.000 15.48 15.48 0.00 4.49
2460 2612 2.276201 CACAAGAACACGTGGAACTCA 58.724 47.619 21.57 0.00 31.75 3.41
2461 2613 2.030457 CACAAGAACACGTGGAACTCAC 59.970 50.000 21.57 2.93 42.74 3.51
2462 2614 1.597663 CAAGAACACGTGGAACTCACC 59.402 52.381 21.57 0.00 43.23 4.02
2463 2615 1.120530 AGAACACGTGGAACTCACCT 58.879 50.000 21.57 1.82 43.23 4.00
2464 2616 2.313317 AGAACACGTGGAACTCACCTA 58.687 47.619 21.57 0.00 43.23 3.08
2465 2617 2.897969 AGAACACGTGGAACTCACCTAT 59.102 45.455 21.57 0.00 43.23 2.57
2466 2618 3.323979 AGAACACGTGGAACTCACCTATT 59.676 43.478 21.57 0.00 43.23 1.73
2467 2619 3.764237 ACACGTGGAACTCACCTATTT 57.236 42.857 21.57 0.00 43.23 1.40
2468 2620 3.399330 ACACGTGGAACTCACCTATTTG 58.601 45.455 21.57 0.00 43.23 2.32
2469 2621 2.159627 CACGTGGAACTCACCTATTTGC 59.840 50.000 7.95 0.00 43.23 3.68
2470 2622 2.038557 ACGTGGAACTCACCTATTTGCT 59.961 45.455 0.00 0.00 43.23 3.91
2471 2623 2.673368 CGTGGAACTCACCTATTTGCTC 59.327 50.000 0.00 0.00 43.23 4.26
2472 2624 3.617531 CGTGGAACTCACCTATTTGCTCT 60.618 47.826 0.00 0.00 43.23 4.09
2473 2625 3.686726 GTGGAACTCACCTATTTGCTCTG 59.313 47.826 0.00 0.00 40.39 3.35
2474 2626 2.680339 GGAACTCACCTATTTGCTCTGC 59.320 50.000 0.00 0.00 0.00 4.26
2475 2627 3.338249 GAACTCACCTATTTGCTCTGCA 58.662 45.455 0.00 0.00 36.47 4.41
2476 2628 2.704572 ACTCACCTATTTGCTCTGCAC 58.295 47.619 0.00 0.00 38.71 4.57
2477 2629 2.038952 ACTCACCTATTTGCTCTGCACA 59.961 45.455 0.00 0.00 38.71 4.57
2478 2630 3.076621 CTCACCTATTTGCTCTGCACAA 58.923 45.455 0.00 0.00 38.71 3.33
2479 2631 3.689347 TCACCTATTTGCTCTGCACAAT 58.311 40.909 0.00 0.00 38.71 2.71
2480 2632 4.842574 TCACCTATTTGCTCTGCACAATA 58.157 39.130 0.00 0.72 38.71 1.90
2481 2633 5.252547 TCACCTATTTGCTCTGCACAATAA 58.747 37.500 0.00 0.00 38.71 1.40
2482 2634 5.887598 TCACCTATTTGCTCTGCACAATAAT 59.112 36.000 0.00 0.00 38.71 1.28
2483 2635 6.377996 TCACCTATTTGCTCTGCACAATAATT 59.622 34.615 0.00 0.00 38.71 1.40
2484 2636 6.694411 CACCTATTTGCTCTGCACAATAATTC 59.306 38.462 0.00 0.00 38.71 2.17
2485 2637 6.183360 ACCTATTTGCTCTGCACAATAATTCC 60.183 38.462 0.00 0.00 38.71 3.01
2486 2638 5.927281 ATTTGCTCTGCACAATAATTCCT 57.073 34.783 0.00 0.00 38.71 3.36
2487 2639 4.707030 TTGCTCTGCACAATAATTCCTG 57.293 40.909 0.00 0.00 38.71 3.86
2488 2640 2.424601 TGCTCTGCACAATAATTCCTGC 59.575 45.455 0.00 0.00 31.71 4.85
2489 2641 2.686915 GCTCTGCACAATAATTCCTGCT 59.313 45.455 0.00 0.00 0.00 4.24
2490 2642 3.488721 GCTCTGCACAATAATTCCTGCTG 60.489 47.826 0.00 0.00 0.00 4.41
2491 2643 3.018856 TCTGCACAATAATTCCTGCTGG 58.981 45.455 2.58 2.58 31.51 4.85
2492 2644 2.100252 CTGCACAATAATTCCTGCTGGG 59.900 50.000 10.07 0.00 0.00 4.45
2493 2645 2.291475 TGCACAATAATTCCTGCTGGGA 60.291 45.455 10.07 0.21 43.41 4.37
2512 2664 4.020617 CCCAGCAGGTGAGCCGAA 62.021 66.667 0.00 0.00 40.50 4.30
2513 2665 2.743928 CCAGCAGGTGAGCCGAAC 60.744 66.667 0.00 0.00 40.50 3.95
2514 2666 2.743928 CAGCAGGTGAGCCGAACC 60.744 66.667 0.00 0.00 40.50 3.62
2515 2667 4.021925 AGCAGGTGAGCCGAACCC 62.022 66.667 0.00 0.00 38.57 4.11
2540 2692 3.297620 CCAACCACAGCTGCCCAC 61.298 66.667 15.27 0.00 0.00 4.61
2541 2693 2.203394 CAACCACAGCTGCCCACT 60.203 61.111 15.27 0.00 0.00 4.00
2542 2694 2.203394 AACCACAGCTGCCCACTG 60.203 61.111 15.27 3.69 41.08 3.66
2543 2695 4.962836 ACCACAGCTGCCCACTGC 62.963 66.667 15.27 0.00 38.79 4.40
2546 2698 4.569180 ACAGCTGCCCACTGCGTT 62.569 61.111 15.27 0.00 45.60 4.84
2547 2699 2.358615 CAGCTGCCCACTGCGTTA 60.359 61.111 0.00 0.00 45.60 3.18
2548 2700 1.965930 CAGCTGCCCACTGCGTTAA 60.966 57.895 0.00 0.00 45.60 2.01
2549 2701 1.672356 AGCTGCCCACTGCGTTAAG 60.672 57.895 0.00 0.00 45.60 1.85
2550 2702 2.690778 GCTGCCCACTGCGTTAAGG 61.691 63.158 0.00 0.00 45.60 2.69
2551 2703 2.033448 TGCCCACTGCGTTAAGGG 59.967 61.111 0.00 0.00 45.60 3.95
2552 2704 2.750237 GCCCACTGCGTTAAGGGG 60.750 66.667 0.00 0.00 41.75 4.79
2553 2705 3.074281 CCCACTGCGTTAAGGGGA 58.926 61.111 4.93 0.00 44.25 4.81
2554 2706 1.607612 CCCACTGCGTTAAGGGGAT 59.392 57.895 4.93 0.00 44.25 3.85
2555 2707 0.748005 CCCACTGCGTTAAGGGGATG 60.748 60.000 4.93 0.00 44.25 3.51
2556 2708 1.376609 CCACTGCGTTAAGGGGATGC 61.377 60.000 0.00 0.00 44.25 3.91
2557 2709 0.676466 CACTGCGTTAAGGGGATGCA 60.676 55.000 0.00 0.00 37.46 3.96
2558 2710 2.397751 CTGCGTTAAGGGGATGCAG 58.602 57.895 4.18 4.18 46.85 4.41
2559 2711 1.077787 TGCGTTAAGGGGATGCAGG 60.078 57.895 0.00 0.00 34.32 4.85
2560 2712 1.077716 GCGTTAAGGGGATGCAGGT 60.078 57.895 0.00 0.00 0.00 4.00
2561 2713 1.376609 GCGTTAAGGGGATGCAGGTG 61.377 60.000 0.00 0.00 0.00 4.00
2562 2714 0.035439 CGTTAAGGGGATGCAGGTGT 60.035 55.000 0.00 0.00 0.00 4.16
2563 2715 1.463674 GTTAAGGGGATGCAGGTGTG 58.536 55.000 0.00 0.00 0.00 3.82
2564 2716 1.004277 GTTAAGGGGATGCAGGTGTGA 59.996 52.381 0.00 0.00 0.00 3.58
2565 2717 0.618458 TAAGGGGATGCAGGTGTGAC 59.382 55.000 0.00 0.00 0.00 3.67
2566 2718 1.426251 AAGGGGATGCAGGTGTGACA 61.426 55.000 0.00 0.00 0.00 3.58
2567 2719 1.210204 AGGGGATGCAGGTGTGACAT 61.210 55.000 0.00 0.00 0.00 3.06
2568 2720 1.033746 GGGGATGCAGGTGTGACATG 61.034 60.000 0.00 0.00 32.28 3.21
2574 2726 3.327600 CAGGTGTGACATGCTGGAA 57.672 52.632 0.00 0.00 0.00 3.53
2575 2727 1.162698 CAGGTGTGACATGCTGGAAG 58.837 55.000 0.00 0.00 0.00 3.46
2576 2728 0.767375 AGGTGTGACATGCTGGAAGT 59.233 50.000 0.00 0.00 35.30 3.01
2577 2729 1.977854 AGGTGTGACATGCTGGAAGTA 59.022 47.619 0.00 0.00 35.30 2.24
2578 2730 2.027745 AGGTGTGACATGCTGGAAGTAG 60.028 50.000 0.00 0.00 35.30 2.57
2579 2731 2.028112 GGTGTGACATGCTGGAAGTAGA 60.028 50.000 0.00 0.00 35.30 2.59
2580 2732 2.996621 GTGTGACATGCTGGAAGTAGAC 59.003 50.000 0.00 0.00 35.30 2.59
2581 2733 2.899900 TGTGACATGCTGGAAGTAGACT 59.100 45.455 0.00 0.00 35.30 3.24
2582 2734 3.324846 TGTGACATGCTGGAAGTAGACTT 59.675 43.478 0.00 0.00 39.23 3.01
2583 2735 3.681897 GTGACATGCTGGAAGTAGACTTG 59.318 47.826 0.00 0.00 36.11 3.16
2584 2736 3.578282 TGACATGCTGGAAGTAGACTTGA 59.422 43.478 0.00 0.00 36.11 3.02
2585 2737 4.040339 TGACATGCTGGAAGTAGACTTGAA 59.960 41.667 0.00 0.00 36.11 2.69
2586 2738 4.973168 ACATGCTGGAAGTAGACTTGAAA 58.027 39.130 0.00 0.00 36.11 2.69
2587 2739 4.757149 ACATGCTGGAAGTAGACTTGAAAC 59.243 41.667 0.00 0.00 36.11 2.78
2588 2740 3.390135 TGCTGGAAGTAGACTTGAAACG 58.610 45.455 0.00 0.00 36.11 3.60
2589 2741 2.737252 GCTGGAAGTAGACTTGAAACGG 59.263 50.000 0.00 0.00 36.11 4.44
2590 2742 3.554337 GCTGGAAGTAGACTTGAAACGGA 60.554 47.826 0.00 0.00 36.11 4.69
2591 2743 4.822026 CTGGAAGTAGACTTGAAACGGAT 58.178 43.478 0.00 0.00 36.11 4.18
2592 2744 5.223449 TGGAAGTAGACTTGAAACGGATT 57.777 39.130 0.00 0.00 36.11 3.01
2593 2745 6.349243 TGGAAGTAGACTTGAAACGGATTA 57.651 37.500 0.00 0.00 36.11 1.75
2594 2746 6.942976 TGGAAGTAGACTTGAAACGGATTAT 58.057 36.000 0.00 0.00 36.11 1.28
2595 2747 7.391620 TGGAAGTAGACTTGAAACGGATTATT 58.608 34.615 0.00 0.00 36.11 1.40
2596 2748 7.333423 TGGAAGTAGACTTGAAACGGATTATTG 59.667 37.037 0.00 0.00 36.11 1.90
2597 2749 7.333672 GGAAGTAGACTTGAAACGGATTATTGT 59.666 37.037 0.00 0.00 36.11 2.71
2598 2750 7.596749 AGTAGACTTGAAACGGATTATTGTG 57.403 36.000 0.00 0.00 0.00 3.33
2599 2751 7.159372 AGTAGACTTGAAACGGATTATTGTGT 58.841 34.615 0.00 0.00 0.00 3.72
2600 2752 6.877611 AGACTTGAAACGGATTATTGTGTT 57.122 33.333 0.00 0.00 0.00 3.32
2601 2753 6.899114 AGACTTGAAACGGATTATTGTGTTC 58.101 36.000 0.00 0.00 0.00 3.18
2602 2754 6.009115 ACTTGAAACGGATTATTGTGTTCC 57.991 37.500 0.00 0.00 0.00 3.62
2603 2755 5.533154 ACTTGAAACGGATTATTGTGTTCCA 59.467 36.000 0.00 0.00 0.00 3.53
2604 2756 6.208599 ACTTGAAACGGATTATTGTGTTCCAT 59.791 34.615 0.00 0.00 0.00 3.41
2605 2757 7.392113 ACTTGAAACGGATTATTGTGTTCCATA 59.608 33.333 0.00 0.00 0.00 2.74
2606 2758 7.873719 TGAAACGGATTATTGTGTTCCATAT 57.126 32.000 0.00 0.00 0.00 1.78
2607 2759 8.287439 TGAAACGGATTATTGTGTTCCATATT 57.713 30.769 0.00 0.00 0.00 1.28
2608 2760 8.402472 TGAAACGGATTATTGTGTTCCATATTC 58.598 33.333 0.00 0.00 0.00 1.75
2609 2761 6.539649 ACGGATTATTGTGTTCCATATTCG 57.460 37.500 0.00 0.00 0.00 3.34
2610 2762 5.049680 ACGGATTATTGTGTTCCATATTCGC 60.050 40.000 0.00 0.00 0.00 4.70
2611 2763 5.616866 CGGATTATTGTGTTCCATATTCGCC 60.617 44.000 0.00 0.00 0.00 5.54
2612 2764 4.804608 TTATTGTGTTCCATATTCGCCG 57.195 40.909 0.00 0.00 0.00 6.46
2613 2765 2.102070 TTGTGTTCCATATTCGCCGT 57.898 45.000 0.00 0.00 0.00 5.68
2614 2766 2.963548 TGTGTTCCATATTCGCCGTA 57.036 45.000 0.00 0.00 0.00 4.02
2615 2767 3.248495 TGTGTTCCATATTCGCCGTAA 57.752 42.857 0.00 0.00 0.00 3.18
2616 2768 3.799366 TGTGTTCCATATTCGCCGTAAT 58.201 40.909 0.00 0.00 0.00 1.89
2617 2769 4.193090 TGTGTTCCATATTCGCCGTAATT 58.807 39.130 0.00 0.00 0.00 1.40
2618 2770 5.358090 TGTGTTCCATATTCGCCGTAATTA 58.642 37.500 0.00 0.00 0.00 1.40
2619 2771 5.464057 TGTGTTCCATATTCGCCGTAATTAG 59.536 40.000 0.00 0.00 0.00 1.73
2620 2772 5.464389 GTGTTCCATATTCGCCGTAATTAGT 59.536 40.000 0.00 0.00 0.00 2.24
2621 2773 6.642131 GTGTTCCATATTCGCCGTAATTAGTA 59.358 38.462 0.00 0.00 0.00 1.82
2622 2774 6.642131 TGTTCCATATTCGCCGTAATTAGTAC 59.358 38.462 0.00 0.00 0.00 2.73
2623 2775 6.579666 TCCATATTCGCCGTAATTAGTACT 57.420 37.500 0.00 0.00 0.00 2.73
2624 2776 7.686438 TCCATATTCGCCGTAATTAGTACTA 57.314 36.000 0.00 0.00 0.00 1.82
2625 2777 8.284945 TCCATATTCGCCGTAATTAGTACTAT 57.715 34.615 2.79 0.00 0.00 2.12
2626 2778 8.742777 TCCATATTCGCCGTAATTAGTACTATT 58.257 33.333 2.79 0.00 0.00 1.73
2632 2784 9.616634 TTCGCCGTAATTAGTACTATTATCAAG 57.383 33.333 2.79 0.00 0.00 3.02
2633 2785 8.239314 TCGCCGTAATTAGTACTATTATCAAGG 58.761 37.037 2.79 3.66 0.00 3.61
2634 2786 8.239314 CGCCGTAATTAGTACTATTATCAAGGA 58.761 37.037 2.79 0.00 0.00 3.36
2635 2787 9.351570 GCCGTAATTAGTACTATTATCAAGGAC 57.648 37.037 2.79 0.00 0.00 3.85
2640 2792 8.813643 ATTAGTACTATTATCAAGGACAACGC 57.186 34.615 2.79 0.00 29.47 4.84
2641 2793 6.466885 AGTACTATTATCAAGGACAACGCT 57.533 37.500 0.00 0.00 29.47 5.07
2642 2794 7.578310 AGTACTATTATCAAGGACAACGCTA 57.422 36.000 0.00 0.00 29.47 4.26
2643 2795 8.004087 AGTACTATTATCAAGGACAACGCTAA 57.996 34.615 0.00 0.00 29.47 3.09
2644 2796 7.919621 AGTACTATTATCAAGGACAACGCTAAC 59.080 37.037 0.00 0.00 29.47 2.34
2646 2798 1.076332 ATCAAGGACAACGCTAACGC 58.924 50.000 0.00 0.00 45.53 4.84
2647 2799 0.947180 TCAAGGACAACGCTAACGCC 60.947 55.000 0.00 0.00 45.53 5.68
2648 2800 1.670083 AAGGACAACGCTAACGCCC 60.670 57.895 0.00 0.00 45.53 6.13
2649 2801 2.357760 GGACAACGCTAACGCCCA 60.358 61.111 0.00 0.00 45.53 5.36
2650 2802 2.674084 GGACAACGCTAACGCCCAC 61.674 63.158 0.00 0.00 45.53 4.61
2651 2803 1.957186 GACAACGCTAACGCCCACA 60.957 57.895 0.00 0.00 45.53 4.17
2652 2804 2.166584 GACAACGCTAACGCCCACAC 62.167 60.000 0.00 0.00 45.53 3.82
2653 2805 3.039588 AACGCTAACGCCCACACG 61.040 61.111 0.00 0.00 45.53 4.49
2667 2819 4.248842 CACGTGTGGTGGGAGCCA 62.249 66.667 7.58 0.00 43.16 4.75
2668 2820 3.484806 ACGTGTGGTGGGAGCCAA 61.485 61.111 0.00 0.00 40.68 4.52
2669 2821 2.203280 CGTGTGGTGGGAGCCAAA 60.203 61.111 0.00 0.00 40.68 3.28
2670 2822 2.551912 CGTGTGGTGGGAGCCAAAC 61.552 63.158 0.00 0.00 42.07 2.93
2671 2823 2.197324 TGTGGTGGGAGCCAAACC 59.803 61.111 4.19 4.19 40.68 3.27
2672 2824 2.600470 GTGGTGGGAGCCAAACCC 60.600 66.667 7.82 0.00 46.87 4.11
2679 2831 4.966787 GAGCCAAACCCGCCCACA 62.967 66.667 0.00 0.00 0.00 4.17
2682 2834 3.601685 CCAAACCCGCCCACACAC 61.602 66.667 0.00 0.00 0.00 3.82
2683 2835 3.601685 CAAACCCGCCCACACACC 61.602 66.667 0.00 0.00 0.00 4.16
2684 2836 4.906537 AAACCCGCCCACACACCC 62.907 66.667 0.00 0.00 0.00 4.61
2686 2838 4.966274 ACCCGCCCACACACCCTA 62.966 66.667 0.00 0.00 0.00 3.53
2687 2839 3.407967 CCCGCCCACACACCCTAT 61.408 66.667 0.00 0.00 0.00 2.57
2688 2840 2.067605 CCCGCCCACACACCCTATA 61.068 63.158 0.00 0.00 0.00 1.31
2689 2841 1.445942 CCGCCCACACACCCTATAG 59.554 63.158 0.00 0.00 0.00 1.31
2690 2842 1.227556 CGCCCACACACCCTATAGC 60.228 63.158 0.00 0.00 0.00 2.97
2691 2843 1.912220 GCCCACACACCCTATAGCA 59.088 57.895 0.00 0.00 0.00 3.49
2692 2844 0.463833 GCCCACACACCCTATAGCAC 60.464 60.000 0.00 0.00 0.00 4.40
2693 2845 0.908910 CCCACACACCCTATAGCACA 59.091 55.000 0.00 0.00 0.00 4.57
2694 2846 1.406887 CCCACACACCCTATAGCACAC 60.407 57.143 0.00 0.00 0.00 3.82
2695 2847 1.277842 CCACACACCCTATAGCACACA 59.722 52.381 0.00 0.00 0.00 3.72
2696 2848 2.621338 CACACACCCTATAGCACACAG 58.379 52.381 0.00 0.00 0.00 3.66
2697 2849 2.233676 CACACACCCTATAGCACACAGA 59.766 50.000 0.00 0.00 0.00 3.41
2698 2850 2.233922 ACACACCCTATAGCACACAGAC 59.766 50.000 0.00 0.00 0.00 3.51
2699 2851 2.497675 CACACCCTATAGCACACAGACT 59.502 50.000 0.00 0.00 0.00 3.24
2700 2852 3.699538 CACACCCTATAGCACACAGACTA 59.300 47.826 0.00 0.00 0.00 2.59
2701 2853 3.700038 ACACCCTATAGCACACAGACTAC 59.300 47.826 0.00 0.00 0.00 2.73
2702 2854 2.950309 ACCCTATAGCACACAGACTACG 59.050 50.000 0.00 0.00 0.00 3.51
2703 2855 2.950309 CCCTATAGCACACAGACTACGT 59.050 50.000 0.00 0.00 0.00 3.57
2704 2856 3.003482 CCCTATAGCACACAGACTACGTC 59.997 52.174 0.00 0.00 0.00 4.34
2705 2857 3.626217 CCTATAGCACACAGACTACGTCA 59.374 47.826 0.00 0.00 34.60 4.35
2706 2858 4.276183 CCTATAGCACACAGACTACGTCAT 59.724 45.833 0.00 0.00 34.60 3.06
2707 2859 2.354109 AGCACACAGACTACGTCATG 57.646 50.000 0.00 0.00 34.60 3.07
2708 2860 1.613925 AGCACACAGACTACGTCATGT 59.386 47.619 0.00 0.00 35.52 3.21
2709 2861 1.986378 GCACACAGACTACGTCATGTC 59.014 52.381 0.00 0.00 33.81 3.06
2710 2862 2.607038 GCACACAGACTACGTCATGTCA 60.607 50.000 15.36 0.00 33.81 3.58
2711 2863 2.980476 CACACAGACTACGTCATGTCAC 59.020 50.000 15.36 0.00 33.81 3.67
2712 2864 2.030185 ACACAGACTACGTCATGTCACC 60.030 50.000 15.36 0.00 31.60 4.02
2713 2865 1.199327 ACAGACTACGTCATGTCACCG 59.801 52.381 15.36 8.14 34.60 4.94
2714 2866 1.467342 CAGACTACGTCATGTCACCGA 59.533 52.381 15.36 0.00 34.60 4.69
2715 2867 2.095415 CAGACTACGTCATGTCACCGAA 60.095 50.000 15.36 0.00 34.60 4.30
2716 2868 2.753452 AGACTACGTCATGTCACCGAAT 59.247 45.455 15.36 0.00 34.60 3.34
2717 2869 2.852413 GACTACGTCATGTCACCGAATG 59.148 50.000 0.00 0.00 33.75 2.67
2718 2870 1.588404 CTACGTCATGTCACCGAATGC 59.412 52.381 0.00 0.00 0.00 3.56
2719 2871 0.320334 ACGTCATGTCACCGAATGCA 60.320 50.000 0.00 0.00 0.00 3.96
2720 2872 1.009078 CGTCATGTCACCGAATGCAT 58.991 50.000 0.00 0.00 0.00 3.96
2721 2873 1.267682 CGTCATGTCACCGAATGCATG 60.268 52.381 0.00 13.02 40.91 4.06
2722 2874 0.734309 TCATGTCACCGAATGCATGC 59.266 50.000 11.82 11.82 40.11 4.06
2723 2875 0.452585 CATGTCACCGAATGCATGCA 59.547 50.000 25.04 25.04 36.61 3.96
2724 2876 1.066454 CATGTCACCGAATGCATGCAT 59.934 47.619 27.46 27.46 36.61 3.96
2725 2877 0.452585 TGTCACCGAATGCATGCATG 59.547 50.000 32.79 22.70 36.68 4.06
2726 2878 0.452987 GTCACCGAATGCATGCATGT 59.547 50.000 32.79 22.95 36.68 3.21
2727 2879 0.452585 TCACCGAATGCATGCATGTG 59.547 50.000 32.79 31.09 36.68 3.21
2728 2880 1.140161 ACCGAATGCATGCATGTGC 59.860 52.632 32.79 22.49 45.25 4.57
2743 2895 5.616488 GCATGTGCAAATCTTTTTGGATT 57.384 34.783 0.00 0.00 43.74 3.01
2744 2896 6.004408 GCATGTGCAAATCTTTTTGGATTT 57.996 33.333 0.00 0.00 43.74 2.17
2745 2897 6.440436 GCATGTGCAAATCTTTTTGGATTTT 58.560 32.000 0.00 0.00 43.74 1.82
2746 2898 6.579666 GCATGTGCAAATCTTTTTGGATTTTC 59.420 34.615 0.00 0.00 43.74 2.29
2747 2899 7.520937 GCATGTGCAAATCTTTTTGGATTTTCT 60.521 33.333 0.00 0.00 43.74 2.52
2748 2900 7.249186 TGTGCAAATCTTTTTGGATTTTCTG 57.751 32.000 0.00 0.00 43.74 3.02
2749 2901 6.822676 TGTGCAAATCTTTTTGGATTTTCTGT 59.177 30.769 0.00 0.00 43.74 3.41
2750 2902 7.336427 TGTGCAAATCTTTTTGGATTTTCTGTT 59.664 29.630 0.00 0.00 43.74 3.16
2751 2903 8.183536 GTGCAAATCTTTTTGGATTTTCTGTTT 58.816 29.630 0.00 0.00 43.74 2.83
2752 2904 8.738106 TGCAAATCTTTTTGGATTTTCTGTTTT 58.262 25.926 0.00 0.00 42.02 2.43
2753 2905 9.571810 GCAAATCTTTTTGGATTTTCTGTTTTT 57.428 25.926 0.00 0.00 42.02 1.94
2796 2948 8.922058 AAATGAAAAATCCGATTGAAGATCTG 57.078 30.769 0.00 0.00 0.00 2.90
2797 2949 7.636150 ATGAAAAATCCGATTGAAGATCTGT 57.364 32.000 0.00 0.00 0.00 3.41
2798 2950 7.452880 TGAAAAATCCGATTGAAGATCTGTT 57.547 32.000 0.00 0.00 0.00 3.16
2799 2951 7.885297 TGAAAAATCCGATTGAAGATCTGTTT 58.115 30.769 0.00 0.00 0.00 2.83
2800 2952 8.359642 TGAAAAATCCGATTGAAGATCTGTTTT 58.640 29.630 0.00 0.00 0.00 2.43
2801 2953 8.748380 AAAAATCCGATTGAAGATCTGTTTTC 57.252 30.769 0.00 0.00 0.00 2.29
2802 2954 7.452880 AAATCCGATTGAAGATCTGTTTTCA 57.547 32.000 0.00 0.00 0.00 2.69
2803 2955 5.862924 TCCGATTGAAGATCTGTTTTCAC 57.137 39.130 0.00 0.00 33.36 3.18
2804 2956 4.695455 TCCGATTGAAGATCTGTTTTCACC 59.305 41.667 0.00 0.00 33.36 4.02
2805 2957 4.455533 CCGATTGAAGATCTGTTTTCACCA 59.544 41.667 0.00 0.00 33.36 4.17
2806 2958 5.124457 CCGATTGAAGATCTGTTTTCACCAT 59.876 40.000 0.00 0.00 33.36 3.55
2807 2959 6.349611 CCGATTGAAGATCTGTTTTCACCATT 60.350 38.462 0.00 0.00 33.36 3.16
2808 2960 7.148255 CCGATTGAAGATCTGTTTTCACCATTA 60.148 37.037 0.00 0.00 33.36 1.90
2809 2961 8.236586 CGATTGAAGATCTGTTTTCACCATTAA 58.763 33.333 0.00 0.00 33.36 1.40
2810 2962 9.912634 GATTGAAGATCTGTTTTCACCATTAAA 57.087 29.630 0.00 0.00 33.36 1.52
2812 2964 9.912634 TTGAAGATCTGTTTTCACCATTAAATC 57.087 29.630 0.00 0.00 33.36 2.17
2813 2965 8.522830 TGAAGATCTGTTTTCACCATTAAATCC 58.477 33.333 0.00 0.00 0.00 3.01
2814 2966 7.410120 AGATCTGTTTTCACCATTAAATCCC 57.590 36.000 0.00 0.00 0.00 3.85
2815 2967 7.184862 AGATCTGTTTTCACCATTAAATCCCT 58.815 34.615 0.00 0.00 0.00 4.20
2816 2968 6.834168 TCTGTTTTCACCATTAAATCCCTC 57.166 37.500 0.00 0.00 0.00 4.30
2817 2969 5.414454 TCTGTTTTCACCATTAAATCCCTCG 59.586 40.000 0.00 0.00 0.00 4.63
2818 2970 4.082463 TGTTTTCACCATTAAATCCCTCGC 60.082 41.667 0.00 0.00 0.00 5.03
2819 2971 1.948104 TCACCATTAAATCCCTCGCG 58.052 50.000 0.00 0.00 0.00 5.87
2820 2972 1.483004 TCACCATTAAATCCCTCGCGA 59.517 47.619 9.26 9.26 0.00 5.87
2821 2973 1.597663 CACCATTAAATCCCTCGCGAC 59.402 52.381 3.71 0.00 0.00 5.19
2822 2974 0.859232 CCATTAAATCCCTCGCGACG 59.141 55.000 3.71 0.04 0.00 5.12
2823 2975 1.537348 CCATTAAATCCCTCGCGACGA 60.537 52.381 3.71 3.75 0.00 4.20
2895 3047 7.979115 TGTTAAAAGTTGTTGTGTCTATTGC 57.021 32.000 0.00 0.00 0.00 3.56
2896 3048 7.539436 TGTTAAAAGTTGTTGTGTCTATTGCA 58.461 30.769 0.00 0.00 0.00 4.08
2897 3049 7.486551 TGTTAAAAGTTGTTGTGTCTATTGCAC 59.513 33.333 0.00 0.00 37.37 4.57
2898 3050 5.574891 AAAGTTGTTGTGTCTATTGCACA 57.425 34.783 0.00 0.00 44.05 4.57
2899 3051 5.772825 AAGTTGTTGTGTCTATTGCACAT 57.227 34.783 0.00 0.00 44.91 3.21
2900 3052 5.112220 AGTTGTTGTGTCTATTGCACATG 57.888 39.130 0.00 0.00 44.91 3.21
2901 3053 4.821260 AGTTGTTGTGTCTATTGCACATGA 59.179 37.500 0.00 0.00 44.91 3.07
2902 3054 5.299028 AGTTGTTGTGTCTATTGCACATGAA 59.701 36.000 0.00 0.00 44.91 2.57
2903 3055 5.963176 TGTTGTGTCTATTGCACATGAAT 57.037 34.783 0.00 0.00 44.91 2.57
2904 3056 6.330004 TGTTGTGTCTATTGCACATGAATT 57.670 33.333 0.00 0.00 44.91 2.17
2905 3057 6.151004 TGTTGTGTCTATTGCACATGAATTG 58.849 36.000 0.00 0.00 44.91 2.32
2906 3058 4.735985 TGTGTCTATTGCACATGAATTGC 58.264 39.130 0.00 0.00 41.32 3.56
2907 3059 4.107622 GTGTCTATTGCACATGAATTGCC 58.892 43.478 0.00 0.00 39.39 4.52
2908 3060 3.762823 TGTCTATTGCACATGAATTGCCA 59.237 39.130 0.00 0.00 39.39 4.92
2909 3061 4.403113 TGTCTATTGCACATGAATTGCCAT 59.597 37.500 0.00 0.00 39.39 4.40
2910 3062 4.743151 GTCTATTGCACATGAATTGCCATG 59.257 41.667 0.00 5.76 46.90 3.66
2911 3063 3.897141 ATTGCACATGAATTGCCATGA 57.103 38.095 12.68 0.00 44.98 3.07
2912 3064 3.897141 TTGCACATGAATTGCCATGAT 57.103 38.095 12.68 0.00 44.98 2.45
2913 3065 3.172229 TGCACATGAATTGCCATGATG 57.828 42.857 12.68 8.75 44.98 3.07
2914 3066 2.498078 TGCACATGAATTGCCATGATGT 59.502 40.909 12.68 0.00 44.98 3.06
2915 3067 3.055747 TGCACATGAATTGCCATGATGTT 60.056 39.130 12.68 0.00 44.98 2.71
2916 3068 3.936453 GCACATGAATTGCCATGATGTTT 59.064 39.130 12.68 0.00 44.98 2.83
2917 3069 5.110598 GCACATGAATTGCCATGATGTTTA 58.889 37.500 12.68 0.00 44.98 2.01
2918 3070 5.005971 GCACATGAATTGCCATGATGTTTAC 59.994 40.000 12.68 0.00 44.98 2.01
2919 3071 6.100668 CACATGAATTGCCATGATGTTTACA 58.899 36.000 12.68 0.00 44.98 2.41
2920 3072 6.035220 CACATGAATTGCCATGATGTTTACAC 59.965 38.462 12.68 0.00 44.98 2.90
2921 3073 5.981088 TGAATTGCCATGATGTTTACACT 57.019 34.783 0.00 0.00 0.00 3.55
2922 3074 6.343716 TGAATTGCCATGATGTTTACACTT 57.656 33.333 0.00 0.00 0.00 3.16
2923 3075 7.459795 TGAATTGCCATGATGTTTACACTTA 57.540 32.000 0.00 0.00 0.00 2.24
2924 3076 7.890515 TGAATTGCCATGATGTTTACACTTAA 58.109 30.769 0.00 0.00 0.00 1.85
2925 3077 8.028354 TGAATTGCCATGATGTTTACACTTAAG 58.972 33.333 0.00 0.00 0.00 1.85
2926 3078 6.892658 TTGCCATGATGTTTACACTTAAGT 57.107 33.333 1.12 1.12 0.00 2.24
2927 3079 6.892658 TGCCATGATGTTTACACTTAAGTT 57.107 33.333 5.07 0.62 0.00 2.66
2928 3080 6.676950 TGCCATGATGTTTACACTTAAGTTG 58.323 36.000 5.07 4.54 0.00 3.16
2929 3081 5.572896 GCCATGATGTTTACACTTAAGTTGC 59.427 40.000 5.07 0.00 0.00 4.17
2930 3082 6.092748 CCATGATGTTTACACTTAAGTTGCC 58.907 40.000 5.07 0.00 0.00 4.52
2931 3083 6.294453 CCATGATGTTTACACTTAAGTTGCCA 60.294 38.462 5.07 0.00 0.00 4.92
2932 3084 6.892658 TGATGTTTACACTTAAGTTGCCAT 57.107 33.333 5.07 4.28 0.00 4.40
2933 3085 7.987750 TGATGTTTACACTTAAGTTGCCATA 57.012 32.000 5.07 0.00 0.00 2.74
2934 3086 8.397575 TGATGTTTACACTTAAGTTGCCATAA 57.602 30.769 5.07 0.00 0.00 1.90
2935 3087 9.019656 TGATGTTTACACTTAAGTTGCCATAAT 57.980 29.630 5.07 0.00 0.00 1.28
2943 3095 9.019656 ACACTTAAGTTGCCATAATATGTTTCA 57.980 29.630 5.07 0.00 0.00 2.69
2944 3096 9.507280 CACTTAAGTTGCCATAATATGTTTCAG 57.493 33.333 5.07 0.00 0.00 3.02
2945 3097 8.190784 ACTTAAGTTGCCATAATATGTTTCAGC 58.809 33.333 1.12 0.00 0.00 4.26
2946 3098 6.780457 AAGTTGCCATAATATGTTTCAGCT 57.220 33.333 0.00 0.04 0.00 4.24
2947 3099 7.880160 AAGTTGCCATAATATGTTTCAGCTA 57.120 32.000 0.00 0.00 0.00 3.32
2948 3100 8.469309 AAGTTGCCATAATATGTTTCAGCTAT 57.531 30.769 0.00 0.00 0.00 2.97
2949 3101 8.469309 AGTTGCCATAATATGTTTCAGCTATT 57.531 30.769 0.00 0.00 0.00 1.73
2950 3102 8.917088 AGTTGCCATAATATGTTTCAGCTATTT 58.083 29.630 0.00 0.00 0.00 1.40
2951 3103 9.533253 GTTGCCATAATATGTTTCAGCTATTTT 57.467 29.630 0.00 0.00 0.00 1.82
2952 3104 9.748708 TTGCCATAATATGTTTCAGCTATTTTC 57.251 29.630 0.00 0.00 0.00 2.29
2953 3105 9.135189 TGCCATAATATGTTTCAGCTATTTTCT 57.865 29.630 0.00 0.00 0.00 2.52
2954 3106 9.971922 GCCATAATATGTTTCAGCTATTTTCTT 57.028 29.630 0.00 0.00 0.00 2.52
3010 3162 7.444629 AAAACGGGGAATTAAGAAACTAGAC 57.555 36.000 0.00 0.00 0.00 2.59
3011 3163 6.370186 AACGGGGAATTAAGAAACTAGACT 57.630 37.500 0.00 0.00 0.00 3.24
3012 3164 6.370186 ACGGGGAATTAAGAAACTAGACTT 57.630 37.500 0.00 1.96 0.00 3.01
3013 3165 6.171213 ACGGGGAATTAAGAAACTAGACTTG 58.829 40.000 0.00 0.00 0.00 3.16
3014 3166 5.064834 CGGGGAATTAAGAAACTAGACTTGC 59.935 44.000 0.00 0.00 0.00 4.01
3015 3167 5.357314 GGGGAATTAAGAAACTAGACTTGCC 59.643 44.000 0.00 0.00 0.00 4.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
215 216 3.504520 GGACGTGAATCCAAGCCTTTTTA 59.495 43.478 0.00 0.00 38.77 1.52
278 279 5.642686 CCAGTTTAAACCGAACAGTTTTGA 58.357 37.500 14.72 0.00 40.38 2.69
351 352 2.560105 GTCAAGATTGCTTTTGGGCTCT 59.440 45.455 0.00 0.00 30.14 4.09
386 387 4.855531 ACGCTCAACATAAAAGTTGTTCC 58.144 39.130 6.70 0.00 46.78 3.62
752 754 7.975058 TCCGTATTGTCGATATGAACAACTTTA 59.025 33.333 1.30 0.00 30.13 1.85
757 759 6.334989 AGTTCCGTATTGTCGATATGAACAA 58.665 36.000 18.48 2.82 37.33 2.83
866 868 3.372206 CGTCTGTTCAGAGCCAAATAAGG 59.628 47.826 2.53 0.00 0.00 2.69
902 904 2.975410 TTCGGGAGTACGCATATACG 57.025 50.000 0.00 0.00 39.50 3.06
933 944 0.895530 TCCTTCATGGAGTCGGTGAC 59.104 55.000 0.00 0.00 40.56 3.67
974 985 1.336980 GGACAAGGAGACGAGACAACC 60.337 57.143 0.00 0.00 0.00 3.77
999 1010 1.068055 GGCCGTGACCGTATATGTAGG 60.068 57.143 0.00 0.00 0.00 3.18
1056 1067 0.608308 TCCTTCGCCAAGAGAGACGA 60.608 55.000 0.00 0.00 0.00 4.20
1057 1068 0.243907 TTCCTTCGCCAAGAGAGACG 59.756 55.000 0.00 0.00 0.00 4.18
1099 1146 1.374758 CCTCAAACTCGAGCGGCTT 60.375 57.895 13.61 0.00 0.00 4.35
1100 1147 1.608717 ATCCTCAAACTCGAGCGGCT 61.609 55.000 13.61 0.00 0.00 5.52
1194 1241 2.440796 AATGGCCCGCTGTGATGG 60.441 61.111 0.00 0.00 0.00 3.51
1365 1412 2.682155 TACATGCCATGCAGTACGAA 57.318 45.000 4.17 0.00 43.65 3.85
1385 1432 0.461693 GCCAGCGCAGAAGATTCTCT 60.462 55.000 11.47 0.00 34.74 3.10
1405 1452 1.450848 CATGATGGTGCGAGCAGGT 60.451 57.895 0.00 0.00 0.00 4.00
1419 1466 1.847506 AGGGCCACACAGGTCATGA 60.848 57.895 6.18 0.00 46.80 3.07
1518 1573 0.908198 GGTCACCCAGAATGCTCTCT 59.092 55.000 0.00 0.00 31.97 3.10
1557 1612 2.920384 TGGTAGTGGCCGTGCTCA 60.920 61.111 0.00 0.00 0.00 4.26
1568 1623 1.298014 GGCAGAAGCAGCTGGTAGT 59.702 57.895 20.51 3.91 44.61 2.73
1759 1814 7.012989 TCCTGCATCAATCAAACTCTATCAATG 59.987 37.037 0.00 0.00 0.00 2.82
1813 1876 1.540267 GAAGCTGATCGATACGCCCTA 59.460 52.381 13.09 0.00 0.00 3.53
1866 1929 1.557269 AAGATGCTCCTGGGCGAAGT 61.557 55.000 0.00 0.00 34.52 3.01
1904 1967 9.053840 TCTATAGAACGACCAACATAACTAGAG 57.946 37.037 0.00 0.00 0.00 2.43
1942 2006 7.647907 ATTAGTAGCCCGAAAAACGTATATG 57.352 36.000 0.00 0.00 40.78 1.78
1955 2039 3.380004 TGCATTCCAAAATTAGTAGCCCG 59.620 43.478 0.00 0.00 0.00 6.13
1972 2097 6.682423 TCGTCACATTCTCATAAATGCATT 57.318 33.333 5.99 5.99 39.72 3.56
2050 2176 8.743099 GTTTGCTCTTTTATAAACAGTGAACAC 58.257 33.333 0.00 0.00 34.19 3.32
2051 2177 8.682710 AGTTTGCTCTTTTATAAACAGTGAACA 58.317 29.630 0.00 0.00 35.93 3.18
2113 2239 1.535028 CGAATTTTGCAAAAAGGGGCC 59.465 47.619 27.10 12.00 0.00 5.80
2173 2306 4.464008 ACTTGTACATTATGCCTCCATGG 58.536 43.478 4.97 4.97 39.35 3.66
2249 2383 8.477419 TGGACTTTGAAAACCTCATATTTCTT 57.523 30.769 0.00 0.00 36.68 2.52
2340 2492 5.487488 TCCACCCTAATCTAACAGTCAATGT 59.513 40.000 0.00 0.00 46.97 2.71
2343 2495 7.069578 GTCTATCCACCCTAATCTAACAGTCAA 59.930 40.741 0.00 0.00 0.00 3.18
2345 2497 6.294065 CGTCTATCCACCCTAATCTAACAGTC 60.294 46.154 0.00 0.00 0.00 3.51
2348 2500 4.831155 CCGTCTATCCACCCTAATCTAACA 59.169 45.833 0.00 0.00 0.00 2.41
2366 2518 2.238646 TGGGTGATTTTATGAGCCGTCT 59.761 45.455 0.00 0.00 36.80 4.18
2367 2519 2.639065 TGGGTGATTTTATGAGCCGTC 58.361 47.619 0.00 0.00 36.80 4.79
2368 2520 2.799126 TGGGTGATTTTATGAGCCGT 57.201 45.000 0.00 0.00 36.80 5.68
2369 2521 3.003689 GTGATGGGTGATTTTATGAGCCG 59.996 47.826 0.00 0.00 36.80 5.52
2370 2522 3.319122 GGTGATGGGTGATTTTATGAGCC 59.681 47.826 0.00 0.00 34.46 4.70
2371 2523 3.003689 CGGTGATGGGTGATTTTATGAGC 59.996 47.826 0.00 0.00 0.00 4.26
2372 2524 4.199310 ACGGTGATGGGTGATTTTATGAG 58.801 43.478 0.00 0.00 0.00 2.90
2373 2525 4.229304 ACGGTGATGGGTGATTTTATGA 57.771 40.909 0.00 0.00 0.00 2.15
2374 2526 5.355630 TGTTACGGTGATGGGTGATTTTATG 59.644 40.000 0.00 0.00 0.00 1.90
2375 2527 5.502079 TGTTACGGTGATGGGTGATTTTAT 58.498 37.500 0.00 0.00 0.00 1.40
2376 2528 4.907809 TGTTACGGTGATGGGTGATTTTA 58.092 39.130 0.00 0.00 0.00 1.52
2377 2529 3.756434 CTGTTACGGTGATGGGTGATTTT 59.244 43.478 0.00 0.00 0.00 1.82
2378 2530 3.244770 ACTGTTACGGTGATGGGTGATTT 60.245 43.478 0.00 0.00 0.00 2.17
2379 2531 2.304761 ACTGTTACGGTGATGGGTGATT 59.695 45.455 0.00 0.00 0.00 2.57
2380 2532 1.906574 ACTGTTACGGTGATGGGTGAT 59.093 47.619 0.00 0.00 0.00 3.06
2381 2533 1.344065 ACTGTTACGGTGATGGGTGA 58.656 50.000 0.00 0.00 0.00 4.02
2382 2534 1.804151 CAACTGTTACGGTGATGGGTG 59.196 52.381 0.00 0.00 0.00 4.61
2383 2535 1.418637 ACAACTGTTACGGTGATGGGT 59.581 47.619 0.00 0.00 0.00 4.51
2384 2536 2.178912 ACAACTGTTACGGTGATGGG 57.821 50.000 0.00 0.00 0.00 4.00
2385 2537 6.971527 TTATTACAACTGTTACGGTGATGG 57.028 37.500 0.00 0.00 0.00 3.51
2386 2538 8.661257 TGATTTATTACAACTGTTACGGTGATG 58.339 33.333 0.00 0.00 0.00 3.07
2387 2539 8.780846 TGATTTATTACAACTGTTACGGTGAT 57.219 30.769 0.00 0.00 0.00 3.06
2388 2540 8.604640 TTGATTTATTACAACTGTTACGGTGA 57.395 30.769 0.00 0.00 0.00 4.02
2389 2541 9.834628 ATTTGATTTATTACAACTGTTACGGTG 57.165 29.630 0.00 0.00 0.00 4.94
2414 2566 9.355916 GGGCCTAGAGATTCAATTAACTTAAAT 57.644 33.333 0.84 0.00 0.00 1.40
2415 2567 8.333235 TGGGCCTAGAGATTCAATTAACTTAAA 58.667 33.333 4.53 0.00 0.00 1.52
2416 2568 7.773690 GTGGGCCTAGAGATTCAATTAACTTAA 59.226 37.037 4.53 0.00 0.00 1.85
2417 2569 7.092623 TGTGGGCCTAGAGATTCAATTAACTTA 60.093 37.037 4.53 0.00 0.00 2.24
2418 2570 6.122964 GTGGGCCTAGAGATTCAATTAACTT 58.877 40.000 4.53 0.00 0.00 2.66
2419 2571 5.191722 TGTGGGCCTAGAGATTCAATTAACT 59.808 40.000 4.53 0.00 0.00 2.24
2420 2572 5.437060 TGTGGGCCTAGAGATTCAATTAAC 58.563 41.667 4.53 0.00 0.00 2.01
2421 2573 5.708736 TGTGGGCCTAGAGATTCAATTAA 57.291 39.130 4.53 0.00 0.00 1.40
2422 2574 5.428457 TCTTGTGGGCCTAGAGATTCAATTA 59.572 40.000 4.53 0.00 0.00 1.40
2423 2575 4.228210 TCTTGTGGGCCTAGAGATTCAATT 59.772 41.667 4.53 0.00 0.00 2.32
2424 2576 3.782523 TCTTGTGGGCCTAGAGATTCAAT 59.217 43.478 4.53 0.00 0.00 2.57
2425 2577 3.181329 TCTTGTGGGCCTAGAGATTCAA 58.819 45.455 4.53 0.00 0.00 2.69
2426 2578 2.832838 TCTTGTGGGCCTAGAGATTCA 58.167 47.619 4.53 0.00 0.00 2.57
2427 2579 3.055094 TGTTCTTGTGGGCCTAGAGATTC 60.055 47.826 4.53 1.14 0.00 2.52
2428 2580 2.912956 TGTTCTTGTGGGCCTAGAGATT 59.087 45.455 4.53 0.00 0.00 2.40
2429 2581 2.237392 GTGTTCTTGTGGGCCTAGAGAT 59.763 50.000 4.53 0.00 0.00 2.75
2430 2582 1.623811 GTGTTCTTGTGGGCCTAGAGA 59.376 52.381 4.53 0.00 0.00 3.10
2431 2583 1.673033 CGTGTTCTTGTGGGCCTAGAG 60.673 57.143 4.53 0.00 0.00 2.43
2432 2584 0.320374 CGTGTTCTTGTGGGCCTAGA 59.680 55.000 4.53 2.01 0.00 2.43
2433 2585 0.034896 ACGTGTTCTTGTGGGCCTAG 59.965 55.000 4.53 0.00 0.00 3.02
2434 2586 0.250124 CACGTGTTCTTGTGGGCCTA 60.250 55.000 7.58 0.00 32.47 3.93
2435 2587 1.525995 CACGTGTTCTTGTGGGCCT 60.526 57.895 7.58 0.00 32.47 5.19
2436 2588 3.030652 CACGTGTTCTTGTGGGCC 58.969 61.111 7.58 0.00 32.47 5.80
2440 2592 2.030457 GTGAGTTCCACGTGTTCTTGTG 59.970 50.000 15.65 0.00 35.86 3.33
2441 2593 2.277084 GTGAGTTCCACGTGTTCTTGT 58.723 47.619 15.65 0.00 35.86 3.16
2442 2594 1.597663 GGTGAGTTCCACGTGTTCTTG 59.402 52.381 15.65 0.00 46.62 3.02
2443 2595 1.485066 AGGTGAGTTCCACGTGTTCTT 59.515 47.619 15.65 0.00 46.62 2.52
2444 2596 1.120530 AGGTGAGTTCCACGTGTTCT 58.879 50.000 15.65 9.31 46.62 3.01
2445 2597 2.806608 TAGGTGAGTTCCACGTGTTC 57.193 50.000 15.65 7.18 46.62 3.18
2446 2598 3.764237 AATAGGTGAGTTCCACGTGTT 57.236 42.857 15.65 0.00 46.62 3.32
2447 2599 3.399330 CAAATAGGTGAGTTCCACGTGT 58.601 45.455 15.65 0.00 46.62 4.49
2448 2600 2.159627 GCAAATAGGTGAGTTCCACGTG 59.840 50.000 9.08 9.08 46.62 4.49
2449 2601 2.038557 AGCAAATAGGTGAGTTCCACGT 59.961 45.455 0.00 0.00 46.62 4.49
2450 2602 2.673368 GAGCAAATAGGTGAGTTCCACG 59.327 50.000 0.00 0.00 46.62 4.94
2451 2603 3.686726 CAGAGCAAATAGGTGAGTTCCAC 59.313 47.826 0.00 0.00 44.95 4.02
2452 2604 3.869912 GCAGAGCAAATAGGTGAGTTCCA 60.870 47.826 0.00 0.00 0.00 3.53
2453 2605 2.680339 GCAGAGCAAATAGGTGAGTTCC 59.320 50.000 0.00 0.00 0.00 3.62
2454 2606 3.126000 GTGCAGAGCAAATAGGTGAGTTC 59.874 47.826 0.00 0.00 41.47 3.01
2455 2607 3.077359 GTGCAGAGCAAATAGGTGAGTT 58.923 45.455 0.00 0.00 41.47 3.01
2456 2608 2.038952 TGTGCAGAGCAAATAGGTGAGT 59.961 45.455 0.00 0.00 41.47 3.41
2457 2609 2.703416 TGTGCAGAGCAAATAGGTGAG 58.297 47.619 0.00 0.00 41.47 3.51
2458 2610 2.857186 TGTGCAGAGCAAATAGGTGA 57.143 45.000 0.00 0.00 41.47 4.02
2459 2611 5.565592 TTATTGTGCAGAGCAAATAGGTG 57.434 39.130 0.00 0.00 41.47 4.00
2460 2612 6.183360 GGAATTATTGTGCAGAGCAAATAGGT 60.183 38.462 0.00 0.00 41.47 3.08
2461 2613 6.040166 AGGAATTATTGTGCAGAGCAAATAGG 59.960 38.462 0.00 0.00 41.47 2.57
2462 2614 6.916387 CAGGAATTATTGTGCAGAGCAAATAG 59.084 38.462 0.00 0.00 41.47 1.73
2463 2615 6.681120 GCAGGAATTATTGTGCAGAGCAAATA 60.681 38.462 0.00 0.00 41.47 1.40
2464 2616 5.657474 CAGGAATTATTGTGCAGAGCAAAT 58.343 37.500 0.00 0.00 41.47 2.32
2465 2617 4.618927 GCAGGAATTATTGTGCAGAGCAAA 60.619 41.667 0.00 0.00 41.47 3.68
2466 2618 3.119388 GCAGGAATTATTGTGCAGAGCAA 60.119 43.478 0.00 0.00 41.47 3.91
2467 2619 2.424601 GCAGGAATTATTGTGCAGAGCA 59.575 45.455 0.00 0.00 35.91 4.26
2468 2620 2.686915 AGCAGGAATTATTGTGCAGAGC 59.313 45.455 10.36 0.00 38.44 4.09
2469 2621 3.066342 CCAGCAGGAATTATTGTGCAGAG 59.934 47.826 10.36 2.23 38.44 3.35
2470 2622 3.018856 CCAGCAGGAATTATTGTGCAGA 58.981 45.455 10.36 0.00 38.44 4.26
2471 2623 2.100252 CCCAGCAGGAATTATTGTGCAG 59.900 50.000 0.00 3.86 38.44 4.41
2472 2624 2.101783 CCCAGCAGGAATTATTGTGCA 58.898 47.619 0.00 0.00 38.44 4.57
2473 2625 2.378038 TCCCAGCAGGAATTATTGTGC 58.622 47.619 0.00 1.75 43.78 4.57
2495 2647 4.020617 TTCGGCTCACCTGCTGGG 62.021 66.667 14.82 4.64 39.62 4.45
2496 2648 2.743928 GTTCGGCTCACCTGCTGG 60.744 66.667 8.29 8.29 39.62 4.85
2497 2649 2.743928 GGTTCGGCTCACCTGCTG 60.744 66.667 0.00 0.00 40.46 4.41
2498 2650 4.021925 GGGTTCGGCTCACCTGCT 62.022 66.667 2.37 0.00 34.36 4.24
2523 2675 3.297620 GTGGGCAGCTGTGGTTGG 61.298 66.667 16.64 0.00 0.00 3.77
2524 2676 2.203394 AGTGGGCAGCTGTGGTTG 60.203 61.111 16.64 0.00 0.00 3.77
2525 2677 2.203394 CAGTGGGCAGCTGTGGTT 60.203 61.111 16.64 0.00 0.00 3.67
2526 2678 4.962836 GCAGTGGGCAGCTGTGGT 62.963 66.667 16.64 0.00 43.97 4.16
2529 2681 2.674563 TTAACGCAGTGGGCAGCTGT 62.675 55.000 16.64 0.00 45.00 4.40
2530 2682 1.915614 CTTAACGCAGTGGGCAGCTG 61.916 60.000 10.11 10.11 45.00 4.24
2531 2683 1.672356 CTTAACGCAGTGGGCAGCT 60.672 57.895 7.17 0.00 45.00 4.24
2532 2684 2.690778 CCTTAACGCAGTGGGCAGC 61.691 63.158 7.17 0.00 45.00 5.25
2533 2685 2.040544 CCCTTAACGCAGTGGGCAG 61.041 63.158 7.17 1.11 45.00 4.85
2534 2686 2.033448 CCCTTAACGCAGTGGGCA 59.967 61.111 7.17 0.00 45.00 5.36
2535 2687 2.552231 ATCCCCTTAACGCAGTGGGC 62.552 60.000 7.17 0.00 45.00 5.36
2536 2688 0.748005 CATCCCCTTAACGCAGTGGG 60.748 60.000 5.50 5.50 45.00 4.61
2537 2689 1.376609 GCATCCCCTTAACGCAGTGG 61.377 60.000 0.00 0.00 45.00 4.00
2538 2690 0.676466 TGCATCCCCTTAACGCAGTG 60.676 55.000 0.00 0.00 45.00 3.66
2540 2692 2.397751 CTGCATCCCCTTAACGCAG 58.602 57.895 0.00 0.00 43.55 5.18
2541 2693 1.077787 CCTGCATCCCCTTAACGCA 60.078 57.895 0.00 0.00 0.00 5.24
2542 2694 1.077716 ACCTGCATCCCCTTAACGC 60.078 57.895 0.00 0.00 0.00 4.84
2543 2695 0.035439 ACACCTGCATCCCCTTAACG 60.035 55.000 0.00 0.00 0.00 3.18
2544 2696 1.004277 TCACACCTGCATCCCCTTAAC 59.996 52.381 0.00 0.00 0.00 2.01
2545 2697 1.004277 GTCACACCTGCATCCCCTTAA 59.996 52.381 0.00 0.00 0.00 1.85
2546 2698 0.618458 GTCACACCTGCATCCCCTTA 59.382 55.000 0.00 0.00 0.00 2.69
2547 2699 1.380302 GTCACACCTGCATCCCCTT 59.620 57.895 0.00 0.00 0.00 3.95
2548 2700 1.210204 ATGTCACACCTGCATCCCCT 61.210 55.000 0.00 0.00 0.00 4.79
2549 2701 1.033746 CATGTCACACCTGCATCCCC 61.034 60.000 0.00 0.00 0.00 4.81
2550 2702 1.660560 GCATGTCACACCTGCATCCC 61.661 60.000 0.00 0.00 39.16 3.85
2551 2703 0.679002 AGCATGTCACACCTGCATCC 60.679 55.000 6.17 0.00 41.32 3.51
2552 2704 0.450583 CAGCATGTCACACCTGCATC 59.549 55.000 6.17 0.00 41.32 3.91
2553 2705 0.963856 CCAGCATGTCACACCTGCAT 60.964 55.000 6.17 0.00 41.32 3.96
2554 2706 1.601477 CCAGCATGTCACACCTGCA 60.601 57.895 6.17 0.00 41.32 4.41
2555 2707 0.890542 TTCCAGCATGTCACACCTGC 60.891 55.000 0.00 0.00 39.55 4.85
2556 2708 1.162698 CTTCCAGCATGTCACACCTG 58.837 55.000 0.00 1.12 0.00 4.00
2557 2709 0.767375 ACTTCCAGCATGTCACACCT 59.233 50.000 0.00 0.00 0.00 4.00
2558 2710 2.028112 TCTACTTCCAGCATGTCACACC 60.028 50.000 0.00 0.00 0.00 4.16
2559 2711 2.996621 GTCTACTTCCAGCATGTCACAC 59.003 50.000 0.00 0.00 0.00 3.82
2560 2712 2.899900 AGTCTACTTCCAGCATGTCACA 59.100 45.455 0.00 0.00 0.00 3.58
2561 2713 3.601443 AGTCTACTTCCAGCATGTCAC 57.399 47.619 0.00 0.00 0.00 3.67
2562 2714 3.578282 TCAAGTCTACTTCCAGCATGTCA 59.422 43.478 0.00 0.00 33.11 3.58
2563 2715 4.193826 TCAAGTCTACTTCCAGCATGTC 57.806 45.455 0.00 0.00 33.11 3.06
2564 2716 4.623932 TTCAAGTCTACTTCCAGCATGT 57.376 40.909 0.00 0.00 33.11 3.21
2565 2717 4.143030 CGTTTCAAGTCTACTTCCAGCATG 60.143 45.833 0.00 0.00 33.11 4.06
2566 2718 3.997021 CGTTTCAAGTCTACTTCCAGCAT 59.003 43.478 0.00 0.00 33.11 3.79
2567 2719 3.390135 CGTTTCAAGTCTACTTCCAGCA 58.610 45.455 0.00 0.00 33.11 4.41
2568 2720 2.737252 CCGTTTCAAGTCTACTTCCAGC 59.263 50.000 0.00 0.00 33.11 4.85
2569 2721 4.252971 TCCGTTTCAAGTCTACTTCCAG 57.747 45.455 0.00 0.00 33.11 3.86
2570 2722 4.884668 ATCCGTTTCAAGTCTACTTCCA 57.115 40.909 0.00 0.00 33.11 3.53
2571 2723 7.333672 ACAATAATCCGTTTCAAGTCTACTTCC 59.666 37.037 0.00 0.00 33.11 3.46
2572 2724 8.169268 CACAATAATCCGTTTCAAGTCTACTTC 58.831 37.037 0.00 0.00 33.11 3.01
2573 2725 7.660208 ACACAATAATCCGTTTCAAGTCTACTT 59.340 33.333 0.00 0.00 36.45 2.24
2574 2726 7.159372 ACACAATAATCCGTTTCAAGTCTACT 58.841 34.615 0.00 0.00 0.00 2.57
2575 2727 7.360575 ACACAATAATCCGTTTCAAGTCTAC 57.639 36.000 0.00 0.00 0.00 2.59
2576 2728 7.118680 GGAACACAATAATCCGTTTCAAGTCTA 59.881 37.037 0.00 0.00 0.00 2.59
2577 2729 6.072673 GGAACACAATAATCCGTTTCAAGTCT 60.073 38.462 0.00 0.00 0.00 3.24
2578 2730 6.084277 GGAACACAATAATCCGTTTCAAGTC 58.916 40.000 0.00 0.00 0.00 3.01
2579 2731 5.533154 TGGAACACAATAATCCGTTTCAAGT 59.467 36.000 0.00 0.00 35.96 3.16
2580 2732 6.007936 TGGAACACAATAATCCGTTTCAAG 57.992 37.500 0.00 0.00 35.96 3.02
2597 2749 7.470424 AGTACTAATTACGGCGAATATGGAACA 60.470 37.037 16.62 0.00 38.26 3.18
2598 2750 6.865205 AGTACTAATTACGGCGAATATGGAAC 59.135 38.462 16.62 3.38 35.61 3.62
2599 2751 6.985117 AGTACTAATTACGGCGAATATGGAA 58.015 36.000 16.62 0.00 35.61 3.53
2600 2752 6.579666 AGTACTAATTACGGCGAATATGGA 57.420 37.500 16.62 0.03 35.61 3.41
2601 2753 8.922058 AATAGTACTAATTACGGCGAATATGG 57.078 34.615 16.62 1.36 35.61 2.74
2606 2758 9.616634 CTTGATAATAGTACTAATTACGGCGAA 57.383 33.333 16.62 3.75 35.61 4.70
2607 2759 8.239314 CCTTGATAATAGTACTAATTACGGCGA 58.761 37.037 16.62 0.00 35.61 5.54
2608 2760 8.239314 TCCTTGATAATAGTACTAATTACGGCG 58.761 37.037 6.70 4.80 35.61 6.46
2609 2761 9.351570 GTCCTTGATAATAGTACTAATTACGGC 57.648 37.037 6.70 2.18 35.61 5.68
2614 2766 9.257651 GCGTTGTCCTTGATAATAGTACTAATT 57.742 33.333 6.70 4.98 0.00 1.40
2615 2767 8.639761 AGCGTTGTCCTTGATAATAGTACTAAT 58.360 33.333 6.70 0.51 0.00 1.73
2616 2768 8.004087 AGCGTTGTCCTTGATAATAGTACTAA 57.996 34.615 6.70 0.00 0.00 2.24
2617 2769 7.578310 AGCGTTGTCCTTGATAATAGTACTA 57.422 36.000 4.77 4.77 0.00 1.82
2618 2770 6.466885 AGCGTTGTCCTTGATAATAGTACT 57.533 37.500 0.00 0.00 0.00 2.73
2619 2771 7.096722 CGTTAGCGTTGTCCTTGATAATAGTAC 60.097 40.741 0.00 0.00 0.00 2.73
2620 2772 6.914215 CGTTAGCGTTGTCCTTGATAATAGTA 59.086 38.462 0.00 0.00 0.00 1.82
2621 2773 5.747197 CGTTAGCGTTGTCCTTGATAATAGT 59.253 40.000 0.00 0.00 0.00 2.12
2622 2774 5.332355 GCGTTAGCGTTGTCCTTGATAATAG 60.332 44.000 0.00 0.00 40.81 1.73
2623 2775 4.505191 GCGTTAGCGTTGTCCTTGATAATA 59.495 41.667 0.00 0.00 40.81 0.98
2624 2776 3.308866 GCGTTAGCGTTGTCCTTGATAAT 59.691 43.478 0.00 0.00 40.81 1.28
2625 2777 2.669434 GCGTTAGCGTTGTCCTTGATAA 59.331 45.455 0.00 0.00 40.81 1.75
2626 2778 2.264813 GCGTTAGCGTTGTCCTTGATA 58.735 47.619 0.00 0.00 40.81 2.15
2627 2779 1.076332 GCGTTAGCGTTGTCCTTGAT 58.924 50.000 0.00 0.00 40.81 2.57
2628 2780 0.947180 GGCGTTAGCGTTGTCCTTGA 60.947 55.000 0.00 0.00 46.35 3.02
2629 2781 1.495951 GGCGTTAGCGTTGTCCTTG 59.504 57.895 0.00 0.00 46.35 3.61
2630 2782 1.670083 GGGCGTTAGCGTTGTCCTT 60.670 57.895 0.00 0.00 46.35 3.36
2631 2783 2.047560 GGGCGTTAGCGTTGTCCT 60.048 61.111 0.00 0.00 46.35 3.85
2632 2784 2.357760 TGGGCGTTAGCGTTGTCC 60.358 61.111 0.00 0.00 46.35 4.02
2633 2785 1.957186 TGTGGGCGTTAGCGTTGTC 60.957 57.895 0.00 0.00 46.35 3.18
2634 2786 2.109387 TGTGGGCGTTAGCGTTGT 59.891 55.556 0.00 0.00 46.35 3.32
2635 2787 2.554272 GTGTGGGCGTTAGCGTTG 59.446 61.111 0.00 0.00 46.35 4.10
2636 2788 3.039588 CGTGTGGGCGTTAGCGTT 61.040 61.111 0.00 0.00 46.35 4.84
2637 2789 4.289245 ACGTGTGGGCGTTAGCGT 62.289 61.111 0.00 0.00 43.04 5.07
2638 2790 3.773630 CACGTGTGGGCGTTAGCG 61.774 66.667 7.58 0.00 43.83 4.26
2639 2791 2.663852 ACACGTGTGGGCGTTAGC 60.664 61.111 22.71 0.00 43.83 3.09
2640 2792 3.240203 CACACGTGTGGGCGTTAG 58.760 61.111 35.65 12.08 43.83 2.34
2648 2800 2.972505 GCTCCCACCACACGTGTG 60.973 66.667 36.13 36.13 45.23 3.82
2649 2801 4.250305 GGCTCCCACCACACGTGT 62.250 66.667 17.22 17.22 41.26 4.49
2650 2802 3.765894 TTGGCTCCCACCACACGTG 62.766 63.158 15.48 15.48 40.19 4.49
2651 2803 3.050354 TTTGGCTCCCACCACACGT 62.050 57.895 0.00 0.00 40.19 4.49
2652 2804 2.203280 TTTGGCTCCCACCACACG 60.203 61.111 0.00 0.00 40.19 4.49
2653 2805 2.200337 GGTTTGGCTCCCACCACAC 61.200 63.158 0.00 0.00 40.19 3.82
2654 2806 2.197324 GGTTTGGCTCCCACCACA 59.803 61.111 0.00 0.00 40.19 4.17
2655 2807 2.600470 GGGTTTGGCTCCCACCAC 60.600 66.667 7.81 0.00 44.05 4.16
2656 2808 4.278513 CGGGTTTGGCTCCCACCA 62.279 66.667 11.94 0.00 44.81 4.17
2662 2814 4.966787 TGTGGGCGGGTTTGGCTC 62.967 66.667 0.00 0.00 34.31 4.70
2665 2817 3.601685 GTGTGTGGGCGGGTTTGG 61.602 66.667 0.00 0.00 0.00 3.28
2666 2818 3.601685 GGTGTGTGGGCGGGTTTG 61.602 66.667 0.00 0.00 0.00 2.93
2667 2819 4.906537 GGGTGTGTGGGCGGGTTT 62.907 66.667 0.00 0.00 0.00 3.27
2669 2821 2.826136 TATAGGGTGTGTGGGCGGGT 62.826 60.000 0.00 0.00 0.00 5.28
2670 2822 2.040009 CTATAGGGTGTGTGGGCGGG 62.040 65.000 0.00 0.00 0.00 6.13
2671 2823 1.445942 CTATAGGGTGTGTGGGCGG 59.554 63.158 0.00 0.00 0.00 6.13
2672 2824 1.227556 GCTATAGGGTGTGTGGGCG 60.228 63.158 1.04 0.00 0.00 6.13
2673 2825 0.463833 GTGCTATAGGGTGTGTGGGC 60.464 60.000 1.04 0.00 0.00 5.36
2674 2826 0.908910 TGTGCTATAGGGTGTGTGGG 59.091 55.000 1.04 0.00 0.00 4.61
2675 2827 1.277842 TGTGTGCTATAGGGTGTGTGG 59.722 52.381 1.04 0.00 0.00 4.17
2676 2828 2.233676 TCTGTGTGCTATAGGGTGTGTG 59.766 50.000 1.04 0.00 0.00 3.82
2677 2829 2.233922 GTCTGTGTGCTATAGGGTGTGT 59.766 50.000 1.04 0.00 0.00 3.72
2678 2830 2.497675 AGTCTGTGTGCTATAGGGTGTG 59.502 50.000 1.04 0.00 0.00 3.82
2679 2831 2.821437 AGTCTGTGTGCTATAGGGTGT 58.179 47.619 1.04 0.00 0.00 4.16
2680 2832 3.243101 CGTAGTCTGTGTGCTATAGGGTG 60.243 52.174 1.04 0.00 0.00 4.61
2681 2833 2.950309 CGTAGTCTGTGTGCTATAGGGT 59.050 50.000 1.04 0.00 0.00 4.34
2682 2834 2.950309 ACGTAGTCTGTGTGCTATAGGG 59.050 50.000 1.04 0.00 29.74 3.53
2698 2850 1.588404 GCATTCGGTGACATGACGTAG 59.412 52.381 0.00 0.00 0.00 3.51
2699 2851 1.067495 TGCATTCGGTGACATGACGTA 60.067 47.619 0.00 0.00 0.00 3.57
2700 2852 0.320334 TGCATTCGGTGACATGACGT 60.320 50.000 0.00 0.00 0.00 4.34
2701 2853 1.009078 ATGCATTCGGTGACATGACG 58.991 50.000 0.00 0.00 0.00 4.35
2702 2854 1.532505 GCATGCATTCGGTGACATGAC 60.533 52.381 14.21 0.00 41.11 3.06
2703 2855 0.734309 GCATGCATTCGGTGACATGA 59.266 50.000 14.21 0.00 41.11 3.07
2704 2856 0.452585 TGCATGCATTCGGTGACATG 59.547 50.000 18.46 14.92 41.33 3.21
2705 2857 1.066454 CATGCATGCATTCGGTGACAT 59.934 47.619 30.32 3.61 33.90 3.06
2706 2858 0.452585 CATGCATGCATTCGGTGACA 59.547 50.000 30.32 0.00 33.90 3.58
2707 2859 0.452987 ACATGCATGCATTCGGTGAC 59.547 50.000 30.32 0.00 33.90 3.67
2708 2860 0.452585 CACATGCATGCATTCGGTGA 59.547 50.000 31.20 7.99 32.82 4.02
2709 2861 1.143373 GCACATGCATGCATTCGGTG 61.143 55.000 30.81 30.81 45.39 4.94
2710 2862 1.140161 GCACATGCATGCATTCGGT 59.860 52.632 30.32 21.67 45.39 4.69
2711 2863 4.006532 GCACATGCATGCATTCGG 57.993 55.556 30.32 21.00 45.39 4.30
2721 2873 5.616488 AATCCAAAAAGATTTGCACATGC 57.384 34.783 0.00 0.00 43.73 4.06
2722 2874 7.801315 CAGAAAATCCAAAAAGATTTGCACATG 59.199 33.333 7.53 0.00 43.90 3.21
2723 2875 7.499895 ACAGAAAATCCAAAAAGATTTGCACAT 59.500 29.630 7.53 0.00 43.90 3.21
2724 2876 6.822676 ACAGAAAATCCAAAAAGATTTGCACA 59.177 30.769 7.53 0.00 43.90 4.57
2725 2877 7.250445 ACAGAAAATCCAAAAAGATTTGCAC 57.750 32.000 7.53 1.34 43.90 4.57
2726 2878 7.862512 AACAGAAAATCCAAAAAGATTTGCA 57.137 28.000 7.53 0.00 43.90 4.08
2727 2879 9.571810 AAAAACAGAAAATCCAAAAAGATTTGC 57.428 25.926 0.59 0.00 43.90 3.68
2771 2923 8.526147 ACAGATCTTCAATCGGATTTTTCATTT 58.474 29.630 0.00 0.00 0.00 2.32
2772 2924 8.059798 ACAGATCTTCAATCGGATTTTTCATT 57.940 30.769 0.00 0.00 0.00 2.57
2773 2925 7.636150 ACAGATCTTCAATCGGATTTTTCAT 57.364 32.000 0.00 0.00 0.00 2.57
2774 2926 7.452880 AACAGATCTTCAATCGGATTTTTCA 57.547 32.000 0.00 0.00 0.00 2.69
2775 2927 8.748380 AAAACAGATCTTCAATCGGATTTTTC 57.252 30.769 0.00 0.00 0.00 2.29
2776 2928 8.359642 TGAAAACAGATCTTCAATCGGATTTTT 58.640 29.630 0.00 0.00 0.00 1.94
2777 2929 7.809806 GTGAAAACAGATCTTCAATCGGATTTT 59.190 33.333 0.00 0.00 33.52 1.82
2778 2930 7.308435 GTGAAAACAGATCTTCAATCGGATTT 58.692 34.615 0.00 0.00 33.52 2.17
2779 2931 6.127897 GGTGAAAACAGATCTTCAATCGGATT 60.128 38.462 0.00 0.00 33.52 3.01
2780 2932 5.355350 GGTGAAAACAGATCTTCAATCGGAT 59.645 40.000 0.00 0.00 33.52 4.18
2781 2933 4.695455 GGTGAAAACAGATCTTCAATCGGA 59.305 41.667 0.00 0.00 33.52 4.55
2782 2934 4.455533 TGGTGAAAACAGATCTTCAATCGG 59.544 41.667 0.00 0.00 33.52 4.18
2783 2935 5.611796 TGGTGAAAACAGATCTTCAATCG 57.388 39.130 0.00 0.00 33.52 3.34
2784 2936 9.912634 TTTAATGGTGAAAACAGATCTTCAATC 57.087 29.630 0.00 0.00 33.52 2.67
2786 2938 9.912634 GATTTAATGGTGAAAACAGATCTTCAA 57.087 29.630 0.00 0.00 33.52 2.69
2787 2939 8.522830 GGATTTAATGGTGAAAACAGATCTTCA 58.477 33.333 0.00 0.00 0.00 3.02
2788 2940 7.976175 GGGATTTAATGGTGAAAACAGATCTTC 59.024 37.037 0.00 0.00 0.00 2.87
2789 2941 7.675619 AGGGATTTAATGGTGAAAACAGATCTT 59.324 33.333 0.00 0.00 0.00 2.40
2790 2942 7.184862 AGGGATTTAATGGTGAAAACAGATCT 58.815 34.615 0.00 0.00 0.00 2.75
2791 2943 7.410120 AGGGATTTAATGGTGAAAACAGATC 57.590 36.000 0.00 0.00 0.00 2.75
2792 2944 6.095440 CGAGGGATTTAATGGTGAAAACAGAT 59.905 38.462 0.00 0.00 0.00 2.90
2793 2945 5.414454 CGAGGGATTTAATGGTGAAAACAGA 59.586 40.000 0.00 0.00 0.00 3.41
2794 2946 5.640732 CGAGGGATTTAATGGTGAAAACAG 58.359 41.667 0.00 0.00 0.00 3.16
2795 2947 4.082463 GCGAGGGATTTAATGGTGAAAACA 60.082 41.667 0.00 0.00 0.00 2.83
2796 2948 4.421058 GCGAGGGATTTAATGGTGAAAAC 58.579 43.478 0.00 0.00 0.00 2.43
2797 2949 3.127895 CGCGAGGGATTTAATGGTGAAAA 59.872 43.478 0.00 0.00 0.00 2.29
2798 2950 2.680841 CGCGAGGGATTTAATGGTGAAA 59.319 45.455 0.00 0.00 0.00 2.69
2799 2951 2.093394 TCGCGAGGGATTTAATGGTGAA 60.093 45.455 3.71 0.00 0.00 3.18
2800 2952 1.483004 TCGCGAGGGATTTAATGGTGA 59.517 47.619 3.71 0.00 0.00 4.02
2801 2953 1.597663 GTCGCGAGGGATTTAATGGTG 59.402 52.381 10.24 0.00 0.00 4.17
2802 2954 1.805120 CGTCGCGAGGGATTTAATGGT 60.805 52.381 20.58 0.00 0.00 3.55
2803 2955 0.859232 CGTCGCGAGGGATTTAATGG 59.141 55.000 20.58 0.00 0.00 3.16
2804 2956 1.847818 TCGTCGCGAGGGATTTAATG 58.152 50.000 26.64 0.13 0.00 1.90
2869 3021 9.030301 GCAATAGACACAACAACTTTTAACAAT 57.970 29.630 0.00 0.00 0.00 2.71
2870 3022 8.029522 TGCAATAGACACAACAACTTTTAACAA 58.970 29.630 0.00 0.00 0.00 2.83
2871 3023 7.486551 GTGCAATAGACACAACAACTTTTAACA 59.513 33.333 0.00 0.00 37.96 2.41
2872 3024 7.486551 TGTGCAATAGACACAACAACTTTTAAC 59.513 33.333 0.00 0.00 44.68 2.01
2873 3025 7.539436 TGTGCAATAGACACAACAACTTTTAA 58.461 30.769 0.00 0.00 44.68 1.52
2874 3026 7.089770 TGTGCAATAGACACAACAACTTTTA 57.910 32.000 0.00 0.00 44.68 1.52
2875 3027 5.960113 TGTGCAATAGACACAACAACTTTT 58.040 33.333 0.00 0.00 44.68 2.27
2876 3028 5.574891 TGTGCAATAGACACAACAACTTT 57.425 34.783 0.00 0.00 44.68 2.66
2885 3037 4.107622 GGCAATTCATGTGCAATAGACAC 58.892 43.478 8.81 0.00 44.07 3.67
2886 3038 3.762823 TGGCAATTCATGTGCAATAGACA 59.237 39.130 8.81 0.00 44.07 3.41
2887 3039 4.374843 TGGCAATTCATGTGCAATAGAC 57.625 40.909 8.81 0.00 44.07 2.59
2888 3040 4.645588 TCATGGCAATTCATGTGCAATAGA 59.354 37.500 8.81 2.08 44.07 1.98
2889 3041 4.939271 TCATGGCAATTCATGTGCAATAG 58.061 39.130 8.81 0.10 44.07 1.73
2890 3042 5.163395 ACATCATGGCAATTCATGTGCAATA 60.163 36.000 8.81 0.00 44.07 1.90
2891 3043 3.897141 TCATGGCAATTCATGTGCAAT 57.103 38.095 8.81 0.38 44.07 3.56
2892 3044 3.055747 ACATCATGGCAATTCATGTGCAA 60.056 39.130 8.81 0.00 44.07 4.08
2893 3045 2.498078 ACATCATGGCAATTCATGTGCA 59.502 40.909 8.81 0.00 44.07 4.57
2894 3046 3.173668 ACATCATGGCAATTCATGTGC 57.826 42.857 6.93 0.00 43.52 4.57
2895 3047 6.035220 GTGTAAACATCATGGCAATTCATGTG 59.965 38.462 6.93 7.27 43.52 3.21
2896 3048 6.071221 AGTGTAAACATCATGGCAATTCATGT 60.071 34.615 6.93 0.00 43.52 3.21
2897 3049 6.334989 AGTGTAAACATCATGGCAATTCATG 58.665 36.000 0.00 1.56 44.20 3.07
2898 3050 6.534475 AGTGTAAACATCATGGCAATTCAT 57.466 33.333 0.00 0.00 0.00 2.57
2899 3051 5.981088 AGTGTAAACATCATGGCAATTCA 57.019 34.783 0.00 0.00 0.00 2.57
2900 3052 8.028938 ACTTAAGTGTAAACATCATGGCAATTC 58.971 33.333 7.48 0.00 0.00 2.17
2901 3053 7.895759 ACTTAAGTGTAAACATCATGGCAATT 58.104 30.769 7.48 0.00 0.00 2.32
2902 3054 7.466746 ACTTAAGTGTAAACATCATGGCAAT 57.533 32.000 7.48 0.00 0.00 3.56
2903 3055 6.892658 ACTTAAGTGTAAACATCATGGCAA 57.107 33.333 7.48 0.00 0.00 4.52
2904 3056 6.676950 CAACTTAAGTGTAAACATCATGGCA 58.323 36.000 9.34 0.00 0.00 4.92
2905 3057 5.572896 GCAACTTAAGTGTAAACATCATGGC 59.427 40.000 9.34 0.00 0.00 4.40
2906 3058 6.092748 GGCAACTTAAGTGTAAACATCATGG 58.907 40.000 9.34 0.00 0.00 3.66
2907 3059 6.676950 TGGCAACTTAAGTGTAAACATCATG 58.323 36.000 9.34 0.56 37.61 3.07
2908 3060 6.892658 TGGCAACTTAAGTGTAAACATCAT 57.107 33.333 9.34 0.00 37.61 2.45
2909 3061 6.892658 ATGGCAACTTAAGTGTAAACATCA 57.107 33.333 9.34 0.73 37.61 3.07
2917 3069 9.019656 TGAAACATATTATGGCAACTTAAGTGT 57.980 29.630 9.34 0.00 39.29 3.55
2918 3070 9.507280 CTGAAACATATTATGGCAACTTAAGTG 57.493 33.333 9.34 4.88 39.29 3.16
2919 3071 8.190784 GCTGAAACATATTATGGCAACTTAAGT 58.809 33.333 1.12 1.12 39.29 2.24
2920 3072 8.408601 AGCTGAAACATATTATGGCAACTTAAG 58.591 33.333 8.48 0.00 39.29 1.85
2921 3073 8.292444 AGCTGAAACATATTATGGCAACTTAA 57.708 30.769 8.48 0.00 40.10 1.85
2922 3074 7.880160 AGCTGAAACATATTATGGCAACTTA 57.120 32.000 8.48 0.00 37.61 2.24
2923 3075 6.780457 AGCTGAAACATATTATGGCAACTT 57.220 33.333 8.48 0.00 37.61 2.66
2924 3076 8.469309 AATAGCTGAAACATATTATGGCAACT 57.531 30.769 8.48 6.61 37.61 3.16
2925 3077 9.533253 AAAATAGCTGAAACATATTATGGCAAC 57.467 29.630 8.48 0.27 33.60 4.17
2926 3078 9.748708 GAAAATAGCTGAAACATATTATGGCAA 57.251 29.630 8.48 0.00 33.60 4.52
2927 3079 9.135189 AGAAAATAGCTGAAACATATTATGGCA 57.865 29.630 8.48 0.00 33.60 4.92
2928 3080 9.971922 AAGAAAATAGCTGAAACATATTATGGC 57.028 29.630 8.48 1.89 33.60 4.40
2984 3136 9.170734 GTCTAGTTTCTTAATTCCCCGTTTTAT 57.829 33.333 0.00 0.00 0.00 1.40
2985 3137 8.377799 AGTCTAGTTTCTTAATTCCCCGTTTTA 58.622 33.333 0.00 0.00 0.00 1.52
2986 3138 7.229308 AGTCTAGTTTCTTAATTCCCCGTTTT 58.771 34.615 0.00 0.00 0.00 2.43
2987 3139 6.776744 AGTCTAGTTTCTTAATTCCCCGTTT 58.223 36.000 0.00 0.00 0.00 3.60
2988 3140 6.370186 AGTCTAGTTTCTTAATTCCCCGTT 57.630 37.500 0.00 0.00 0.00 4.44
2989 3141 6.171213 CAAGTCTAGTTTCTTAATTCCCCGT 58.829 40.000 0.00 0.00 0.00 5.28
2990 3142 5.064834 GCAAGTCTAGTTTCTTAATTCCCCG 59.935 44.000 0.00 0.00 0.00 5.73
2991 3143 5.357314 GGCAAGTCTAGTTTCTTAATTCCCC 59.643 44.000 0.00 0.00 0.00 4.81
2992 3144 6.438259 GGCAAGTCTAGTTTCTTAATTCCC 57.562 41.667 0.00 0.00 0.00 3.97


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.