Multiple sequence alignment - TraesCS3B01G192500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G192500 chr3B 100.000 5091 0 0 1 5091 207119825 207124915 0.000000e+00 9402.0
1 TraesCS3B01G192500 chr3B 97.588 456 11 0 4636 5091 154002537 154002992 0.000000e+00 782.0
2 TraesCS3B01G192500 chr3B 96.491 456 16 0 4636 5091 552492218 552492673 0.000000e+00 754.0
3 TraesCS3B01G192500 chr3B 80.769 78 15 0 3696 3773 498367161 498367084 1.530000e-05 62.1
4 TraesCS3B01G192500 chr3B 100.000 29 0 0 2 30 406732445 406732473 3.000000e-03 54.7
5 TraesCS3B01G192500 chr3B 100.000 29 0 0 2 30 551590388 551590360 3.000000e-03 54.7
6 TraesCS3B01G192500 chr3B 100.000 29 0 0 2 30 816340884 816340912 3.000000e-03 54.7
7 TraesCS3B01G192500 chr3D 94.922 3761 142 24 432 4159 143456812 143460556 0.000000e+00 5842.0
8 TraesCS3B01G192500 chr3D 94.601 426 16 2 4216 4639 143460576 143460996 0.000000e+00 652.0
9 TraesCS3B01G192500 chr3D 81.013 79 15 0 3696 3774 382806515 382806437 4.260000e-06 63.9
10 TraesCS3B01G192500 chr3D 79.310 87 18 0 3696 3782 382753654 382753568 1.530000e-05 62.1
11 TraesCS3B01G192500 chrUn 94.336 3637 140 35 1026 4637 188197775 188194180 0.000000e+00 5515.0
12 TraesCS3B01G192500 chrUn 88.487 304 18 6 432 730 188198214 188197923 8.110000e-93 351.0
13 TraesCS3B01G192500 chrUn 81.000 100 19 0 3237 3336 302674321 302674420 4.230000e-11 80.5
14 TraesCS3B01G192500 chrUn 92.308 52 3 1 4108 4159 188194665 188194615 7.070000e-09 73.1
15 TraesCS3B01G192500 chrUn 100.000 29 0 0 2 30 9552667 9552639 3.000000e-03 54.7
16 TraesCS3B01G192500 chrUn 100.000 28 0 0 2 29 96504608 96504581 9.000000e-03 52.8
17 TraesCS3B01G192500 chr7B 95.405 457 21 0 4635 5091 637610480 637610024 0.000000e+00 728.0
18 TraesCS3B01G192500 chr7B 92.593 54 2 2 4636 4687 197698507 197698454 5.470000e-10 76.8
19 TraesCS3B01G192500 chr7B 79.825 114 14 6 4636 4746 668401645 668401752 1.970000e-09 75.0
20 TraesCS3B01G192500 chr7B 100.000 30 0 0 1 30 197923818 197923789 7.120000e-04 56.5
21 TraesCS3B01G192500 chr2B 93.764 433 26 1 3226 3657 576586355 576585923 0.000000e+00 649.0
22 TraesCS3B01G192500 chr2B 76.408 284 50 13 154 429 530249851 530249577 2.470000e-28 137.0
23 TraesCS3B01G192500 chr2B 75.828 302 43 21 154 432 678090504 678090210 5.350000e-25 126.0
24 TraesCS3B01G192500 chr2B 81.000 100 19 0 3237 3336 797232215 797232116 4.230000e-11 80.5
25 TraesCS3B01G192500 chr2B 81.000 100 19 0 3237 3336 797260703 797260604 4.230000e-11 80.5
26 TraesCS3B01G192500 chr2D 89.398 349 23 4 4747 5091 509951868 509952206 1.310000e-115 427.0
27 TraesCS3B01G192500 chr2D 94.118 51 3 0 379 429 63537471 63537421 1.520000e-10 78.7
28 TraesCS3B01G192500 chr4D 86.080 352 40 5 905 1249 127102143 127101794 2.240000e-98 370.0
29 TraesCS3B01G192500 chr4D 77.070 314 62 9 3303 3611 397094852 397094544 6.780000e-39 172.0
30 TraesCS3B01G192500 chr4D 93.333 75 5 0 1313 1387 127101790 127101716 1.500000e-20 111.0
31 TraesCS3B01G192500 chr4D 92.000 50 4 0 3732 3781 84545735 84545686 2.540000e-08 71.3
32 TraesCS3B01G192500 chr1D 86.182 275 35 3 154 426 361785740 361785467 1.390000e-75 294.0
33 TraesCS3B01G192500 chr1D 82.677 127 16 4 21 146 361786034 361785913 1.940000e-19 108.0
34 TraesCS3B01G192500 chr5D 86.182 275 33 4 156 426 362602771 362603044 4.990000e-75 292.0
35 TraesCS3B01G192500 chr5D 81.250 128 24 0 3224 3351 10775622 10775749 2.510000e-18 104.0
36 TraesCS3B01G192500 chr5D 95.455 44 2 0 3729 3772 106520212 106520169 2.540000e-08 71.3
37 TraesCS3B01G192500 chr1B 84.000 275 39 4 156 426 677509996 677510269 5.060000e-65 259.0
38 TraesCS3B01G192500 chr1B 93.333 45 2 1 21 64 344326325 344326369 1.180000e-06 65.8
39 TraesCS3B01G192500 chr4A 77.070 314 62 9 3303 3611 54107726 54107418 6.780000e-39 172.0
40 TraesCS3B01G192500 chr4A 88.710 124 14 0 21 144 207395798 207395675 8.830000e-33 152.0
41 TraesCS3B01G192500 chr4A 92.000 50 4 0 3732 3781 497440567 497440518 2.540000e-08 71.3
42 TraesCS3B01G192500 chr5B 81.250 128 24 0 3224 3351 11306705 11306578 2.510000e-18 104.0
43 TraesCS3B01G192500 chr5B 97.826 46 0 1 154 198 57444898 57444853 1.520000e-10 78.7
44 TraesCS3B01G192500 chr5B 92.593 54 2 2 4636 4687 381767351 381767404 5.470000e-10 76.8
45 TraesCS3B01G192500 chr5A 80.469 128 25 0 3224 3351 8904940 8904813 1.170000e-16 99.0
46 TraesCS3B01G192500 chr5A 100.000 29 0 0 2 30 283768618 283768646 3.000000e-03 54.7
47 TraesCS3B01G192500 chr5A 100.000 29 0 0 2 30 501260548 501260576 3.000000e-03 54.7
48 TraesCS3B01G192500 chr2A 90.625 64 3 3 4626 4687 166062486 166062424 1.170000e-11 82.4
49 TraesCS3B01G192500 chr7A 92.593 54 2 2 4636 4687 566092075 566092128 5.470000e-10 76.8
50 TraesCS3B01G192500 chr6B 77.966 118 22 4 4636 4749 188587763 188587646 2.540000e-08 71.3
51 TraesCS3B01G192500 chr3A 79.310 87 16 2 3697 3782 505723416 505723331 5.500000e-05 60.2
52 TraesCS3B01G192500 chr1A 100.000 29 0 0 2 30 255127611 255127583 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G192500 chr3B 207119825 207124915 5090 False 9402.0 9402 100.000000 1 5091 1 chr3B.!!$F2 5090
1 TraesCS3B01G192500 chr3D 143456812 143460996 4184 False 3247.0 5842 94.761500 432 4639 2 chr3D.!!$F1 4207
2 TraesCS3B01G192500 chrUn 188194180 188198214 4034 True 1979.7 5515 91.710333 432 4637 3 chrUn.!!$R3 4205
3 TraesCS3B01G192500 chr1D 361785467 361786034 567 True 201.0 294 84.429500 21 426 2 chr1D.!!$R1 405

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
238 406 0.038618 CACGGTCGATGACAGGACAA 60.039 55.000 10.53 0.00 34.87 3.18 F
396 565 0.039074 CCGGCCGCTTGAGACTATAG 60.039 60.000 22.85 0.00 0.00 1.31 F
951 1153 0.041238 TCCTTCATCTGACCCCGACT 59.959 55.000 0.00 0.00 0.00 4.18 F
2496 2705 1.221293 CTCCTCTCTTGGCAGCCTG 59.779 63.158 14.15 5.81 0.00 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1896 2105 0.104120 CGAACAGGTCATGCGGGATA 59.896 55.000 0.00 0.0 0.00 2.59 R
2094 2303 0.106868 TCTCGCCGGAGATGGAGTTA 60.107 55.000 8.83 0.0 44.28 2.24 R
2517 2726 1.661112 GATAGCGAGTTGTTGTGGAGC 59.339 52.381 0.00 0.0 0.00 4.70 R
4156 4396 0.028902 GCGTAAACGGGCCATGATTC 59.971 55.000 4.39 0.0 40.23 2.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
76 77 4.554363 CTACGGGCGTGGCGAGAG 62.554 72.222 0.00 0.00 0.00 3.20
138 140 3.443045 TACGGACGCGGGGAGAAC 61.443 66.667 12.47 0.00 0.00 3.01
146 148 4.856607 CGGGGAGAACGAGCGAGC 62.857 72.222 0.00 0.00 0.00 5.03
148 150 4.856607 GGGAGAACGAGCGAGCGG 62.857 72.222 0.00 0.00 35.12 5.52
149 151 4.117661 GGAGAACGAGCGAGCGGT 62.118 66.667 0.00 0.00 35.12 5.68
150 152 2.876645 GAGAACGAGCGAGCGGTG 60.877 66.667 0.00 0.00 35.12 4.94
151 153 3.324099 GAGAACGAGCGAGCGGTGA 62.324 63.158 0.00 0.00 35.12 4.02
152 154 2.876645 GAACGAGCGAGCGGTGAG 60.877 66.667 0.00 0.00 35.12 3.51
160 327 2.433318 GAGCGGTGAGAGTGGCAC 60.433 66.667 10.29 10.29 35.56 5.01
168 335 2.143122 GTGAGAGTGGCACGAAATTCA 58.857 47.619 12.71 9.79 0.00 2.57
193 361 2.747686 CCACCGCCCACTACTTGT 59.252 61.111 0.00 0.00 0.00 3.16
194 362 1.375523 CCACCGCCCACTACTTGTC 60.376 63.158 0.00 0.00 0.00 3.18
201 369 1.403780 GCCCACTACTTGTCTACGGTG 60.404 57.143 0.00 0.00 0.00 4.94
211 379 2.867624 TGTCTACGGTGACTAACTGGT 58.132 47.619 10.55 0.00 39.74 4.00
212 380 4.019792 TGTCTACGGTGACTAACTGGTA 57.980 45.455 10.55 0.00 39.74 3.25
214 382 5.744171 TGTCTACGGTGACTAACTGGTATA 58.256 41.667 10.55 0.00 39.74 1.47
222 390 5.220931 GGTGACTAACTGGTATACCTACACG 60.221 48.000 22.41 10.68 36.82 4.49
235 403 1.092348 CTACACGGTCGATGACAGGA 58.908 55.000 0.00 0.00 33.68 3.86
237 405 1.176619 ACACGGTCGATGACAGGACA 61.177 55.000 10.53 0.00 34.87 4.02
238 406 0.038618 CACGGTCGATGACAGGACAA 60.039 55.000 10.53 0.00 34.87 3.18
246 414 2.358737 GACAGGACAAGCCCACCG 60.359 66.667 0.00 0.00 37.37 4.94
247 415 2.847234 ACAGGACAAGCCCACCGA 60.847 61.111 0.00 0.00 37.37 4.69
307 475 4.868116 GCGGGATAAGCGGGCCAA 62.868 66.667 4.39 0.00 0.00 4.52
324 492 0.685097 CAAGGGAGAAACCGACCAGA 59.315 55.000 0.00 0.00 40.11 3.86
327 495 2.829023 AGGGAGAAACCGACCAGATAA 58.171 47.619 0.00 0.00 40.11 1.75
372 540 3.245315 CACGCGATCGGACGGTTC 61.245 66.667 15.93 0.00 40.69 3.62
376 544 2.024305 CGATCGGACGGTTCGAGG 59.976 66.667 17.51 7.88 40.09 4.63
378 546 3.769875 GATCGGACGGTTCGAGGCC 62.770 68.421 17.51 0.00 40.09 5.19
396 565 0.039074 CCGGCCGCTTGAGACTATAG 60.039 60.000 22.85 0.00 0.00 1.31
405 574 0.818040 TGAGACTATAGGCGAGCGCA 60.818 55.000 17.16 0.00 44.11 6.09
426 595 4.374707 GCACGCGCACTAGTATGTATTTAC 60.375 45.833 5.73 0.00 38.36 2.01
427 596 3.970610 ACGCGCACTAGTATGTATTTACG 59.029 43.478 5.73 0.00 0.00 3.18
428 597 4.213674 CGCGCACTAGTATGTATTTACGA 58.786 43.478 8.75 0.00 0.00 3.43
429 598 4.317551 CGCGCACTAGTATGTATTTACGAG 59.682 45.833 8.75 0.00 32.85 4.18
430 599 5.446709 GCGCACTAGTATGTATTTACGAGA 58.553 41.667 0.30 0.00 31.57 4.04
491 662 7.973402 AGGAAATGGTAAACAGCCTAAATTTT 58.027 30.769 0.00 0.00 30.21 1.82
493 664 8.503196 GGAAATGGTAAACAGCCTAAATTTTTG 58.497 33.333 0.00 0.00 0.00 2.44
506 677 1.519408 ATTTTTGACCGACAGGACCG 58.481 50.000 0.00 0.00 41.02 4.79
562 742 1.125093 TCTCAGAGGCCCAAACCGAA 61.125 55.000 0.00 0.00 33.69 4.30
596 780 2.786495 ATCTCGGCGCCACAGTAGG 61.786 63.158 28.98 8.23 0.00 3.18
633 817 3.111484 ACCCCAACAAAACAGGTCAAAT 58.889 40.909 0.00 0.00 0.00 2.32
849 1051 1.394151 CTCCCTTGTCCTCTCCCCT 59.606 63.158 0.00 0.00 0.00 4.79
863 1065 1.081853 CTCCCCTATCCATCCCCATCT 59.918 57.143 0.00 0.00 0.00 2.90
938 1140 2.264480 CCATGTCGCCGTCCTTCA 59.736 61.111 0.00 0.00 0.00 3.02
948 1150 1.141881 CGTCCTTCATCTGACCCCG 59.858 63.158 0.00 0.00 0.00 5.73
951 1153 0.041238 TCCTTCATCTGACCCCGACT 59.959 55.000 0.00 0.00 0.00 4.18
1056 1259 4.807039 GCCAATGCCGCCTTGCTG 62.807 66.667 3.04 0.00 0.00 4.41
1057 1260 4.137872 CCAATGCCGCCTTGCTGG 62.138 66.667 3.04 0.00 39.35 4.85
1058 1261 3.376078 CAATGCCGCCTTGCTGGT 61.376 61.111 0.00 0.00 38.35 4.00
1059 1262 3.376078 AATGCCGCCTTGCTGGTG 61.376 61.111 3.42 3.42 45.60 4.17
1060 1263 4.666253 ATGCCGCCTTGCTGGTGT 62.666 61.111 8.59 0.00 44.58 4.16
1584 1793 1.811266 CCGGGAGCTCAACATGTCG 60.811 63.158 17.19 6.99 0.00 4.35
1591 1800 3.057019 GAGCTCAACATGTCGTACAACA 58.943 45.455 9.40 0.00 0.00 3.33
2058 2267 3.842923 CTGCCGGCAGATCTCGGT 61.843 66.667 46.72 0.00 46.30 4.69
2094 2303 1.296715 GTGCCTGGACTTGTCCGAT 59.703 57.895 14.24 0.00 0.00 4.18
2181 2390 2.632377 CTCAATAATGTGCTCACCGGT 58.368 47.619 0.00 0.00 0.00 5.28
2183 2392 2.027653 TCAATAATGTGCTCACCGGTCA 60.028 45.455 2.59 0.00 0.00 4.02
2227 2436 2.758327 ATAGGCTGCGACGGGTGA 60.758 61.111 0.00 0.00 0.00 4.02
2232 2441 3.449227 CTGCGACGGGTGAGGCTA 61.449 66.667 0.00 0.00 0.00 3.93
2241 2450 1.417890 CGGGTGAGGCTATCCAAGAAT 59.582 52.381 9.19 0.00 33.74 2.40
2242 2451 2.158755 CGGGTGAGGCTATCCAAGAATT 60.159 50.000 9.19 0.00 33.74 2.17
2254 2463 1.298157 CAAGAATTGGCTCGACGGCA 61.298 55.000 9.90 6.96 43.94 5.69
2496 2705 1.221293 CTCCTCTCTTGGCAGCCTG 59.779 63.158 14.15 5.81 0.00 4.85
2664 2873 2.224548 GGTGCTCAACTACCTTGACCTT 60.225 50.000 0.00 0.00 33.65 3.50
2676 2885 3.733960 GACCTTTCCGGCAACCGC 61.734 66.667 0.00 0.00 46.86 5.68
2898 3107 2.839486 TTATCTGGATGATGCGGTCC 57.161 50.000 0.00 0.00 36.65 4.46
2928 3137 2.665185 GCGGCTGTCGTCTTGGTT 60.665 61.111 2.76 0.00 41.72 3.67
3045 3254 2.476854 GGTTTCATTCAGCGAGCATGAC 60.477 50.000 0.00 0.00 0.00 3.06
3081 3290 3.185246 GATGAGGACAATGTCATCGGT 57.815 47.619 20.78 13.19 44.84 4.69
3102 3311 2.355115 GGTGCATCCGGGAAGGTT 59.645 61.111 0.00 0.00 41.99 3.50
3171 3380 4.020378 GGCGGCGCGTTGAAGAAA 62.020 61.111 26.95 0.00 0.00 2.52
3375 3584 3.011517 AAGGCCGGTCTGCTGGAT 61.012 61.111 10.71 0.00 43.97 3.41
3399 3608 1.348538 CGACGCGGTACAAGATTGCA 61.349 55.000 12.47 0.00 0.00 4.08
3444 3653 2.740055 CTGCACCAGGACTGCGTC 60.740 66.667 0.00 0.79 37.46 5.19
3573 3782 3.134127 GCGCCCAAGTCCATGTCC 61.134 66.667 0.00 0.00 0.00 4.02
3597 3806 2.190578 GCTGGCTCCTGCGGTTAT 59.809 61.111 2.05 0.00 40.82 1.89
3630 3839 5.875910 TGGTAAGACTTTCTGAACGTTTCAA 59.124 36.000 0.46 0.00 39.58 2.69
3631 3840 6.540914 TGGTAAGACTTTCTGAACGTTTCAAT 59.459 34.615 0.46 0.00 39.58 2.57
3649 3858 8.318876 CGTTTCAATAGTTCAGTTATTAGTCCG 58.681 37.037 0.00 0.00 0.00 4.79
3680 3889 3.876274 ACGTGCATGTAAGTCTGATCT 57.124 42.857 10.57 0.00 0.00 2.75
3681 3890 4.193826 ACGTGCATGTAAGTCTGATCTT 57.806 40.909 10.57 0.00 0.00 2.40
3683 3892 5.344066 ACGTGCATGTAAGTCTGATCTTAG 58.656 41.667 10.57 0.00 31.69 2.18
3684 3893 5.105716 ACGTGCATGTAAGTCTGATCTTAGT 60.106 40.000 10.57 0.00 31.69 2.24
3686 3895 6.020281 CGTGCATGTAAGTCTGATCTTAGTTC 60.020 42.308 0.00 0.00 31.69 3.01
3818 4028 1.596895 GGAGTTCGGCGAGAAGGACT 61.597 60.000 10.46 10.57 39.95 3.85
3856 4066 3.349927 CAGCACCATTGATCAGAAAGGA 58.650 45.455 10.56 0.00 0.00 3.36
4044 4254 1.152963 ACAAGGACGGCAAGCTGTT 60.153 52.632 8.09 0.00 35.39 3.16
4087 4297 1.153489 CGATCAGGGGAGCAGTGTG 60.153 63.158 0.00 0.00 0.00 3.82
4095 4305 1.626825 GGGGAGCAGTGTGTAGGTAAA 59.373 52.381 0.00 0.00 0.00 2.01
4097 4307 2.354805 GGGAGCAGTGTGTAGGTAAAGG 60.355 54.545 0.00 0.00 0.00 3.11
4098 4308 2.302157 GGAGCAGTGTGTAGGTAAAGGT 59.698 50.000 0.00 0.00 0.00 3.50
4101 4311 5.148651 AGCAGTGTGTAGGTAAAGGTAAG 57.851 43.478 0.00 0.00 0.00 2.34
4102 4312 3.683340 GCAGTGTGTAGGTAAAGGTAAGC 59.317 47.826 0.00 0.00 0.00 3.09
4103 4313 4.251268 CAGTGTGTAGGTAAAGGTAAGCC 58.749 47.826 0.00 0.00 0.00 4.35
4104 4314 3.905591 AGTGTGTAGGTAAAGGTAAGCCA 59.094 43.478 0.00 0.00 37.19 4.75
4106 4316 3.256558 GTGTAGGTAAAGGTAAGCCACG 58.743 50.000 0.00 0.00 37.19 4.94
4160 4400 3.502191 CCGAGCTCTAGGCATAGAATC 57.498 52.381 12.85 9.43 44.79 2.52
4162 4402 3.446873 CCGAGCTCTAGGCATAGAATCAT 59.553 47.826 12.85 0.00 44.79 2.45
4163 4403 4.422840 CGAGCTCTAGGCATAGAATCATG 58.577 47.826 12.85 0.00 44.79 3.07
4164 4404 4.677514 CGAGCTCTAGGCATAGAATCATGG 60.678 50.000 12.85 0.00 44.79 3.66
4168 4408 2.559785 GGCATAGAATCATGGCCCG 58.440 57.895 0.00 0.00 43.70 6.13
4169 4409 0.250901 GGCATAGAATCATGGCCCGT 60.251 55.000 0.00 0.00 43.70 5.28
4170 4410 1.609208 GCATAGAATCATGGCCCGTT 58.391 50.000 0.00 0.00 0.00 4.44
4171 4411 1.956477 GCATAGAATCATGGCCCGTTT 59.044 47.619 0.00 0.00 0.00 3.60
4173 4413 3.058224 GCATAGAATCATGGCCCGTTTAC 60.058 47.826 0.00 0.00 0.00 2.01
4174 4414 1.663695 AGAATCATGGCCCGTTTACG 58.336 50.000 0.00 0.00 39.44 3.18
4175 4415 0.028902 GAATCATGGCCCGTTTACGC 59.971 55.000 0.00 0.00 38.18 4.42
4180 4420 2.979120 GGCCCGTTTACGCCACAA 60.979 61.111 0.00 0.00 45.01 3.33
4181 4421 2.559330 GCCCGTTTACGCCACAAG 59.441 61.111 0.00 0.00 38.18 3.16
4182 4422 2.255881 GCCCGTTTACGCCACAAGT 61.256 57.895 0.00 0.00 38.18 3.16
4183 4423 1.788067 GCCCGTTTACGCCACAAGTT 61.788 55.000 0.00 0.00 38.18 2.66
4184 4424 0.040781 CCCGTTTACGCCACAAGTTG 60.041 55.000 0.00 0.00 38.18 3.16
4185 4425 0.659123 CCGTTTACGCCACAAGTTGC 60.659 55.000 1.81 0.00 38.18 4.17
4186 4426 0.659123 CGTTTACGCCACAAGTTGCC 60.659 55.000 1.81 0.00 0.00 4.52
4187 4427 0.382515 GTTTACGCCACAAGTTGCCA 59.617 50.000 1.81 0.00 0.00 4.92
4188 4428 0.382515 TTTACGCCACAAGTTGCCAC 59.617 50.000 1.81 0.00 0.00 5.01
4189 4429 1.777030 TTACGCCACAAGTTGCCACG 61.777 55.000 1.81 6.62 0.00 4.94
4190 4430 2.646117 TACGCCACAAGTTGCCACGA 62.646 55.000 16.06 1.35 0.00 4.35
4191 4431 2.639286 GCCACAAGTTGCCACGAG 59.361 61.111 1.81 0.00 0.00 4.18
4192 4432 2.186826 GCCACAAGTTGCCACGAGT 61.187 57.895 1.81 0.00 0.00 4.18
4193 4433 1.724582 GCCACAAGTTGCCACGAGTT 61.725 55.000 1.81 0.00 0.00 3.01
4194 4434 1.588674 CCACAAGTTGCCACGAGTTA 58.411 50.000 1.81 0.00 0.00 2.24
4195 4435 1.944024 CCACAAGTTGCCACGAGTTAA 59.056 47.619 1.81 0.00 0.00 2.01
4196 4436 2.032030 CCACAAGTTGCCACGAGTTAAG 60.032 50.000 1.81 0.00 0.00 1.85
4197 4437 1.602377 ACAAGTTGCCACGAGTTAAGC 59.398 47.619 1.81 0.00 0.00 3.09
4198 4438 1.873591 CAAGTTGCCACGAGTTAAGCT 59.126 47.619 0.00 0.00 0.00 3.74
4199 4439 3.064207 CAAGTTGCCACGAGTTAAGCTA 58.936 45.455 0.00 0.00 0.00 3.32
4200 4440 3.396260 AGTTGCCACGAGTTAAGCTAA 57.604 42.857 0.00 0.00 0.00 3.09
4201 4441 3.939066 AGTTGCCACGAGTTAAGCTAAT 58.061 40.909 0.00 0.00 0.00 1.73
4202 4442 3.933332 AGTTGCCACGAGTTAAGCTAATC 59.067 43.478 0.00 0.00 0.00 1.75
4203 4443 2.536365 TGCCACGAGTTAAGCTAATCG 58.464 47.619 4.89 4.89 40.86 3.34
4204 4444 1.859080 GCCACGAGTTAAGCTAATCGG 59.141 52.381 10.68 0.86 39.42 4.18
4205 4445 2.470821 CCACGAGTTAAGCTAATCGGG 58.529 52.381 10.68 6.47 39.42 5.14
4206 4446 2.159142 CCACGAGTTAAGCTAATCGGGT 60.159 50.000 10.68 0.00 36.87 5.28
4207 4447 3.067180 CCACGAGTTAAGCTAATCGGGTA 59.933 47.826 10.68 0.00 36.87 3.69
4208 4448 4.440525 CCACGAGTTAAGCTAATCGGGTAA 60.441 45.833 10.68 0.00 36.87 2.85
4209 4449 5.104374 CACGAGTTAAGCTAATCGGGTAAA 58.896 41.667 10.68 0.00 39.42 2.01
4210 4450 5.751990 CACGAGTTAAGCTAATCGGGTAAAT 59.248 40.000 10.68 0.00 39.42 1.40
4211 4451 5.981915 ACGAGTTAAGCTAATCGGGTAAATC 59.018 40.000 10.68 1.25 39.42 2.17
4212 4452 6.183360 ACGAGTTAAGCTAATCGGGTAAATCT 60.183 38.462 10.68 0.00 39.42 2.40
4213 4453 6.144080 CGAGTTAAGCTAATCGGGTAAATCTG 59.856 42.308 0.00 0.00 0.00 2.90
4214 4454 6.289064 AGTTAAGCTAATCGGGTAAATCTGG 58.711 40.000 0.00 0.00 0.00 3.86
4258 4498 2.027625 CTTGTTGTCGACGCCTCCC 61.028 63.158 11.62 0.00 0.00 4.30
4294 4534 1.639298 GAGTTGATGTGTGCTCCGGC 61.639 60.000 0.00 0.00 39.26 6.13
4360 4602 0.881159 CGGCGGTGTTCTTGGTTGTA 60.881 55.000 0.00 0.00 0.00 2.41
4498 4743 5.239351 TGGTAGTATGTTGCTTTCGCTTTA 58.761 37.500 0.00 0.00 36.97 1.85
4511 4756 6.036626 TGCTTTCGCTTTATGTCGATGAAATA 59.963 34.615 0.00 0.00 36.97 1.40
4512 4757 6.905076 GCTTTCGCTTTATGTCGATGAAATAA 59.095 34.615 0.00 0.00 34.48 1.40
4513 4758 7.428183 GCTTTCGCTTTATGTCGATGAAATAAA 59.572 33.333 0.00 2.99 32.72 1.40
4514 4759 9.272901 CTTTCGCTTTATGTCGATGAAATAAAA 57.727 29.630 4.28 0.00 33.15 1.52
4515 4760 9.781834 TTTCGCTTTATGTCGATGAAATAAAAT 57.218 25.926 4.28 0.00 33.15 1.82
4639 4884 5.012354 CGGGGTCCAGCTATTTATTTAGGTA 59.988 44.000 0.00 0.00 0.00 3.08
4640 4885 6.464749 CGGGGTCCAGCTATTTATTTAGGTAA 60.465 42.308 0.00 0.00 0.00 2.85
4641 4886 7.292319 GGGGTCCAGCTATTTATTTAGGTAAA 58.708 38.462 0.00 0.00 0.00 2.01
4642 4887 7.230108 GGGGTCCAGCTATTTATTTAGGTAAAC 59.770 40.741 0.00 0.00 0.00 2.01
4643 4888 7.041576 GGGTCCAGCTATTTATTTAGGTAAACG 60.042 40.741 0.00 0.00 0.00 3.60
4644 4889 7.496920 GGTCCAGCTATTTATTTAGGTAAACGT 59.503 37.037 0.00 0.00 0.00 3.99
4645 4890 8.886719 GTCCAGCTATTTATTTAGGTAAACGTT 58.113 33.333 0.00 0.00 0.00 3.99
4646 4891 9.452287 TCCAGCTATTTATTTAGGTAAACGTTT 57.548 29.630 18.90 18.90 0.00 3.60
4647 4892 9.498307 CCAGCTATTTATTTAGGTAAACGTTTG 57.502 33.333 23.46 2.51 0.00 2.93
4648 4893 9.498307 CAGCTATTTATTTAGGTAAACGTTTGG 57.502 33.333 23.46 0.00 0.00 3.28
4649 4894 8.680001 AGCTATTTATTTAGGTAAACGTTTGGG 58.320 33.333 23.46 0.00 0.00 4.12
4650 4895 8.676401 GCTATTTATTTAGGTAAACGTTTGGGA 58.324 33.333 23.46 0.24 0.00 4.37
4653 4898 5.806366 ATTTAGGTAAACGTTTGGGATCG 57.194 39.130 23.46 0.00 0.00 3.69
4654 4899 2.103537 AGGTAAACGTTTGGGATCGG 57.896 50.000 23.46 0.00 0.00 4.18
4655 4900 0.448990 GGTAAACGTTTGGGATCGGC 59.551 55.000 23.46 3.59 0.00 5.54
4656 4901 0.095762 GTAAACGTTTGGGATCGGCG 59.904 55.000 23.46 0.00 0.00 6.46
4657 4902 1.637478 TAAACGTTTGGGATCGGCGC 61.637 55.000 23.46 0.00 0.00 6.53
4658 4903 4.690719 ACGTTTGGGATCGGCGCA 62.691 61.111 10.83 0.00 37.71 6.09
4659 4904 4.160635 CGTTTGGGATCGGCGCAC 62.161 66.667 10.83 0.00 39.39 5.34
4660 4905 3.810896 GTTTGGGATCGGCGCACC 61.811 66.667 10.83 7.90 39.39 5.01
4708 4953 2.713154 GTGGACACCACGCAACAC 59.287 61.111 5.17 0.00 44.95 3.32
4709 4954 2.109739 GTGGACACCACGCAACACA 61.110 57.895 5.17 0.00 44.95 3.72
4710 4955 1.377333 TGGACACCACGCAACACAA 60.377 52.632 0.00 0.00 0.00 3.33
4711 4956 1.355210 GGACACCACGCAACACAAG 59.645 57.895 0.00 0.00 0.00 3.16
4712 4957 1.355210 GACACCACGCAACACAAGG 59.645 57.895 0.00 0.00 0.00 3.61
4713 4958 2.058829 GACACCACGCAACACAAGGG 62.059 60.000 0.00 0.00 0.00 3.95
4714 4959 3.216292 ACCACGCAACACAAGGGC 61.216 61.111 0.00 0.00 0.00 5.19
4715 4960 3.977244 CCACGCAACACAAGGGCC 61.977 66.667 0.00 0.00 0.00 5.80
4716 4961 3.977244 CACGCAACACAAGGGCCC 61.977 66.667 16.46 16.46 0.00 5.80
4720 4965 3.977244 CAACACAAGGGCCCGCAC 61.977 66.667 18.44 0.00 0.00 5.34
4721 4966 4.514585 AACACAAGGGCCCGCACA 62.515 61.111 18.44 0.00 0.00 4.57
4724 4969 4.954970 ACAAGGGCCCGCACACAG 62.955 66.667 18.44 4.84 0.00 3.66
4725 4970 4.954970 CAAGGGCCCGCACACAGT 62.955 66.667 18.44 0.00 0.00 3.55
4726 4971 4.643387 AAGGGCCCGCACACAGTC 62.643 66.667 18.44 0.00 0.00 3.51
4730 4975 4.664677 GCCCGCACACAGTCGTCT 62.665 66.667 0.00 0.00 0.00 4.18
4731 4976 2.029073 CCCGCACACAGTCGTCTT 59.971 61.111 0.00 0.00 0.00 3.01
4732 4977 1.594293 CCCGCACACAGTCGTCTTT 60.594 57.895 0.00 0.00 0.00 2.52
4733 4978 1.557443 CCCGCACACAGTCGTCTTTC 61.557 60.000 0.00 0.00 0.00 2.62
4734 4979 1.557443 CCGCACACAGTCGTCTTTCC 61.557 60.000 0.00 0.00 0.00 3.13
4735 4980 0.597637 CGCACACAGTCGTCTTTCCT 60.598 55.000 0.00 0.00 0.00 3.36
4736 4981 1.140816 GCACACAGTCGTCTTTCCTC 58.859 55.000 0.00 0.00 0.00 3.71
4737 4982 1.269831 GCACACAGTCGTCTTTCCTCT 60.270 52.381 0.00 0.00 0.00 3.69
4738 4983 2.030185 GCACACAGTCGTCTTTCCTCTA 60.030 50.000 0.00 0.00 0.00 2.43
4739 4984 3.367498 GCACACAGTCGTCTTTCCTCTAT 60.367 47.826 0.00 0.00 0.00 1.98
4740 4985 4.416620 CACACAGTCGTCTTTCCTCTATC 58.583 47.826 0.00 0.00 0.00 2.08
4741 4986 3.444388 ACACAGTCGTCTTTCCTCTATCC 59.556 47.826 0.00 0.00 0.00 2.59
4742 4987 3.697045 CACAGTCGTCTTTCCTCTATCCT 59.303 47.826 0.00 0.00 0.00 3.24
4743 4988 3.949113 ACAGTCGTCTTTCCTCTATCCTC 59.051 47.826 0.00 0.00 0.00 3.71
4744 4989 4.204012 CAGTCGTCTTTCCTCTATCCTCT 58.796 47.826 0.00 0.00 0.00 3.69
4745 4990 4.642885 CAGTCGTCTTTCCTCTATCCTCTT 59.357 45.833 0.00 0.00 0.00 2.85
4746 4991 4.885325 AGTCGTCTTTCCTCTATCCTCTTC 59.115 45.833 0.00 0.00 0.00 2.87
4747 4992 4.885325 GTCGTCTTTCCTCTATCCTCTTCT 59.115 45.833 0.00 0.00 0.00 2.85
4748 4993 5.008316 GTCGTCTTTCCTCTATCCTCTTCTC 59.992 48.000 0.00 0.00 0.00 2.87
4749 4994 4.024387 CGTCTTTCCTCTATCCTCTTCTCG 60.024 50.000 0.00 0.00 0.00 4.04
4750 4995 4.277423 GTCTTTCCTCTATCCTCTTCTCGG 59.723 50.000 0.00 0.00 0.00 4.63
4751 4996 2.961531 TCCTCTATCCTCTTCTCGGG 57.038 55.000 0.00 0.00 0.00 5.14
4752 4997 1.202952 TCCTCTATCCTCTTCTCGGGC 60.203 57.143 0.00 0.00 0.00 6.13
4753 4998 1.253100 CTCTATCCTCTTCTCGGGCC 58.747 60.000 0.00 0.00 0.00 5.80
4754 4999 0.537600 TCTATCCTCTTCTCGGGCCG 60.538 60.000 22.51 22.51 0.00 6.13
4755 5000 1.528292 CTATCCTCTTCTCGGGCCGG 61.528 65.000 27.98 17.02 0.00 6.13
4756 5001 2.294170 TATCCTCTTCTCGGGCCGGT 62.294 60.000 27.98 1.58 0.00 5.28
4757 5002 3.839432 CCTCTTCTCGGGCCGGTC 61.839 72.222 27.98 0.00 0.00 4.79
4758 5003 3.068691 CTCTTCTCGGGCCGGTCA 61.069 66.667 27.98 5.74 0.00 4.02
4759 5004 3.358076 CTCTTCTCGGGCCGGTCAC 62.358 68.421 27.98 0.00 0.00 3.67
4760 5005 4.796231 CTTCTCGGGCCGGTCACG 62.796 72.222 27.98 11.69 40.55 4.35
4779 5024 3.267860 GCGAGCCAAGCGATCCAG 61.268 66.667 0.00 0.00 0.00 3.86
4780 5025 2.587194 CGAGCCAAGCGATCCAGG 60.587 66.667 0.00 0.00 0.00 4.45
4784 5029 4.113815 CCAAGCGATCCAGGCCCA 62.114 66.667 0.00 0.00 0.00 5.36
4785 5030 2.194056 CAAGCGATCCAGGCCCAT 59.806 61.111 0.00 0.00 0.00 4.00
4786 5031 1.895707 CAAGCGATCCAGGCCCATC 60.896 63.158 0.00 0.00 0.00 3.51
4787 5032 2.377810 AAGCGATCCAGGCCCATCA 61.378 57.895 0.00 0.00 0.00 3.07
4788 5033 1.713005 AAGCGATCCAGGCCCATCAT 61.713 55.000 0.00 0.00 0.00 2.45
4789 5034 0.837691 AGCGATCCAGGCCCATCATA 60.838 55.000 0.00 0.00 0.00 2.15
4790 5035 0.674895 GCGATCCAGGCCCATCATAC 60.675 60.000 0.00 0.00 0.00 2.39
4791 5036 0.390340 CGATCCAGGCCCATCATACG 60.390 60.000 0.00 0.00 0.00 3.06
4792 5037 0.687354 GATCCAGGCCCATCATACGT 59.313 55.000 0.00 0.00 0.00 3.57
4793 5038 0.687354 ATCCAGGCCCATCATACGTC 59.313 55.000 0.00 0.00 0.00 4.34
4794 5039 0.398522 TCCAGGCCCATCATACGTCT 60.399 55.000 0.00 0.00 0.00 4.18
4795 5040 0.034059 CCAGGCCCATCATACGTCTC 59.966 60.000 0.00 0.00 0.00 3.36
4796 5041 1.043816 CAGGCCCATCATACGTCTCT 58.956 55.000 0.00 0.00 0.00 3.10
4797 5042 1.043816 AGGCCCATCATACGTCTCTG 58.956 55.000 0.00 0.00 0.00 3.35
4798 5043 0.601311 GGCCCATCATACGTCTCTGC 60.601 60.000 0.00 0.00 0.00 4.26
4799 5044 0.390860 GCCCATCATACGTCTCTGCT 59.609 55.000 0.00 0.00 0.00 4.24
4800 5045 1.604185 GCCCATCATACGTCTCTGCTC 60.604 57.143 0.00 0.00 0.00 4.26
4801 5046 1.683385 CCCATCATACGTCTCTGCTCA 59.317 52.381 0.00 0.00 0.00 4.26
4802 5047 2.544694 CCCATCATACGTCTCTGCTCAC 60.545 54.545 0.00 0.00 0.00 3.51
4803 5048 2.544694 CCATCATACGTCTCTGCTCACC 60.545 54.545 0.00 0.00 0.00 4.02
4804 5049 2.130272 TCATACGTCTCTGCTCACCT 57.870 50.000 0.00 0.00 0.00 4.00
4805 5050 2.017782 TCATACGTCTCTGCTCACCTC 58.982 52.381 0.00 0.00 0.00 3.85
4806 5051 1.066303 CATACGTCTCTGCTCACCTCC 59.934 57.143 0.00 0.00 0.00 4.30
4807 5052 0.328592 TACGTCTCTGCTCACCTCCT 59.671 55.000 0.00 0.00 0.00 3.69
4808 5053 1.247419 ACGTCTCTGCTCACCTCCTG 61.247 60.000 0.00 0.00 0.00 3.86
4809 5054 1.217779 GTCTCTGCTCACCTCCTGC 59.782 63.158 0.00 0.00 0.00 4.85
4810 5055 1.986757 TCTCTGCTCACCTCCTGCC 60.987 63.158 0.00 0.00 0.00 4.85
4811 5056 1.988956 CTCTGCTCACCTCCTGCCT 60.989 63.158 0.00 0.00 0.00 4.75
4812 5057 1.958902 CTCTGCTCACCTCCTGCCTC 61.959 65.000 0.00 0.00 0.00 4.70
4813 5058 2.203832 TGCTCACCTCCTGCCTCA 60.204 61.111 0.00 0.00 0.00 3.86
4814 5059 2.267324 GCTCACCTCCTGCCTCAC 59.733 66.667 0.00 0.00 0.00 3.51
4815 5060 2.985456 CTCACCTCCTGCCTCACC 59.015 66.667 0.00 0.00 0.00 4.02
4816 5061 1.611851 CTCACCTCCTGCCTCACCT 60.612 63.158 0.00 0.00 0.00 4.00
4817 5062 1.152030 TCACCTCCTGCCTCACCTT 60.152 57.895 0.00 0.00 0.00 3.50
4818 5063 0.116342 TCACCTCCTGCCTCACCTTA 59.884 55.000 0.00 0.00 0.00 2.69
4819 5064 1.207791 CACCTCCTGCCTCACCTTAT 58.792 55.000 0.00 0.00 0.00 1.73
4820 5065 1.139853 CACCTCCTGCCTCACCTTATC 59.860 57.143 0.00 0.00 0.00 1.75
4821 5066 1.008938 ACCTCCTGCCTCACCTTATCT 59.991 52.381 0.00 0.00 0.00 1.98
4822 5067 2.122768 CCTCCTGCCTCACCTTATCTT 58.877 52.381 0.00 0.00 0.00 2.40
4823 5068 2.103941 CCTCCTGCCTCACCTTATCTTC 59.896 54.545 0.00 0.00 0.00 2.87
4824 5069 3.037549 CTCCTGCCTCACCTTATCTTCT 58.962 50.000 0.00 0.00 0.00 2.85
4825 5070 3.454082 CTCCTGCCTCACCTTATCTTCTT 59.546 47.826 0.00 0.00 0.00 2.52
4826 5071 3.452627 TCCTGCCTCACCTTATCTTCTTC 59.547 47.826 0.00 0.00 0.00 2.87
4827 5072 3.432890 CCTGCCTCACCTTATCTTCTTCC 60.433 52.174 0.00 0.00 0.00 3.46
4828 5073 3.454082 CTGCCTCACCTTATCTTCTTCCT 59.546 47.826 0.00 0.00 0.00 3.36
4829 5074 3.452627 TGCCTCACCTTATCTTCTTCCTC 59.547 47.826 0.00 0.00 0.00 3.71
4830 5075 3.181459 GCCTCACCTTATCTTCTTCCTCC 60.181 52.174 0.00 0.00 0.00 4.30
4831 5076 4.294347 CCTCACCTTATCTTCTTCCTCCT 58.706 47.826 0.00 0.00 0.00 3.69
4832 5077 4.343814 CCTCACCTTATCTTCTTCCTCCTC 59.656 50.000 0.00 0.00 0.00 3.71
4833 5078 4.290942 TCACCTTATCTTCTTCCTCCTCC 58.709 47.826 0.00 0.00 0.00 4.30
4834 5079 4.016105 TCACCTTATCTTCTTCCTCCTCCT 60.016 45.833 0.00 0.00 0.00 3.69
4835 5080 4.100808 CACCTTATCTTCTTCCTCCTCCTG 59.899 50.000 0.00 0.00 0.00 3.86
4836 5081 4.016105 ACCTTATCTTCTTCCTCCTCCTGA 60.016 45.833 0.00 0.00 0.00 3.86
4837 5082 5.154418 CCTTATCTTCTTCCTCCTCCTGAT 58.846 45.833 0.00 0.00 0.00 2.90
4838 5083 5.245977 CCTTATCTTCTTCCTCCTCCTGATC 59.754 48.000 0.00 0.00 0.00 2.92
4839 5084 3.039252 TCTTCTTCCTCCTCCTGATCC 57.961 52.381 0.00 0.00 0.00 3.36
4840 5085 2.046292 CTTCTTCCTCCTCCTGATCCC 58.954 57.143 0.00 0.00 0.00 3.85
4841 5086 0.266152 TCTTCCTCCTCCTGATCCCC 59.734 60.000 0.00 0.00 0.00 4.81
4842 5087 0.267356 CTTCCTCCTCCTGATCCCCT 59.733 60.000 0.00 0.00 0.00 4.79
4843 5088 0.725133 TTCCTCCTCCTGATCCCCTT 59.275 55.000 0.00 0.00 0.00 3.95
4844 5089 0.266152 TCCTCCTCCTGATCCCCTTC 59.734 60.000 0.00 0.00 0.00 3.46
4845 5090 0.267356 CCTCCTCCTGATCCCCTTCT 59.733 60.000 0.00 0.00 0.00 2.85
4846 5091 1.715785 CTCCTCCTGATCCCCTTCTC 58.284 60.000 0.00 0.00 0.00 2.87
4847 5092 1.220236 CTCCTCCTGATCCCCTTCTCT 59.780 57.143 0.00 0.00 0.00 3.10
4848 5093 1.653918 TCCTCCTGATCCCCTTCTCTT 59.346 52.381 0.00 0.00 0.00 2.85
4849 5094 2.046447 TCCTCCTGATCCCCTTCTCTTT 59.954 50.000 0.00 0.00 0.00 2.52
4850 5095 2.437651 CCTCCTGATCCCCTTCTCTTTC 59.562 54.545 0.00 0.00 0.00 2.62
4851 5096 3.383223 CTCCTGATCCCCTTCTCTTTCT 58.617 50.000 0.00 0.00 0.00 2.52
4852 5097 3.379452 TCCTGATCCCCTTCTCTTTCTC 58.621 50.000 0.00 0.00 0.00 2.87
4853 5098 3.013417 TCCTGATCCCCTTCTCTTTCTCT 59.987 47.826 0.00 0.00 0.00 3.10
4854 5099 3.387699 CCTGATCCCCTTCTCTTTCTCTC 59.612 52.174 0.00 0.00 0.00 3.20
4855 5100 4.289245 CTGATCCCCTTCTCTTTCTCTCT 58.711 47.826 0.00 0.00 0.00 3.10
4856 5101 4.285863 TGATCCCCTTCTCTTTCTCTCTC 58.714 47.826 0.00 0.00 0.00 3.20
4857 5102 4.016666 TGATCCCCTTCTCTTTCTCTCTCT 60.017 45.833 0.00 0.00 0.00 3.10
4858 5103 5.194740 TGATCCCCTTCTCTTTCTCTCTCTA 59.805 44.000 0.00 0.00 0.00 2.43
4859 5104 5.742562 TCCCCTTCTCTTTCTCTCTCTAT 57.257 43.478 0.00 0.00 0.00 1.98
4860 5105 5.701224 TCCCCTTCTCTTTCTCTCTCTATC 58.299 45.833 0.00 0.00 0.00 2.08
4861 5106 5.194740 TCCCCTTCTCTTTCTCTCTCTATCA 59.805 44.000 0.00 0.00 0.00 2.15
4862 5107 5.301805 CCCCTTCTCTTTCTCTCTCTATCAC 59.698 48.000 0.00 0.00 0.00 3.06
4863 5108 5.890985 CCCTTCTCTTTCTCTCTCTATCACA 59.109 44.000 0.00 0.00 0.00 3.58
4864 5109 6.039717 CCCTTCTCTTTCTCTCTCTATCACAG 59.960 46.154 0.00 0.00 0.00 3.66
4865 5110 6.449635 TTCTCTTTCTCTCTCTATCACAGC 57.550 41.667 0.00 0.00 0.00 4.40
4866 5111 4.887071 TCTCTTTCTCTCTCTATCACAGCC 59.113 45.833 0.00 0.00 0.00 4.85
4867 5112 3.629855 TCTTTCTCTCTCTATCACAGCCG 59.370 47.826 0.00 0.00 0.00 5.52
4868 5113 1.313772 TCTCTCTCTATCACAGCCGC 58.686 55.000 0.00 0.00 0.00 6.53
4869 5114 1.028130 CTCTCTCTATCACAGCCGCA 58.972 55.000 0.00 0.00 0.00 5.69
4870 5115 1.001487 CTCTCTCTATCACAGCCGCAG 60.001 57.143 0.00 0.00 0.00 5.18
4871 5116 0.597118 CTCTCTATCACAGCCGCAGC 60.597 60.000 0.00 0.00 40.32 5.25
4872 5117 1.593750 CTCTATCACAGCCGCAGCC 60.594 63.158 0.00 0.00 41.25 4.85
4873 5118 2.187685 CTATCACAGCCGCAGCCA 59.812 61.111 0.00 0.00 41.25 4.75
4874 5119 2.125147 TATCACAGCCGCAGCCAC 60.125 61.111 0.00 0.00 41.25 5.01
4882 5127 4.764336 CCGCAGCCACGCATGTTG 62.764 66.667 0.00 0.00 0.00 3.33
4883 5128 4.764336 CGCAGCCACGCATGTTGG 62.764 66.667 10.35 10.35 0.00 3.77
4901 5146 4.394712 CGGCCAGCCCTTCGTCTT 62.395 66.667 2.24 0.00 0.00 3.01
4902 5147 2.034221 GGCCAGCCCTTCGTCTTT 59.966 61.111 0.00 0.00 0.00 2.52
4903 5148 2.041115 GGCCAGCCCTTCGTCTTTC 61.041 63.158 0.00 0.00 0.00 2.62
4904 5149 1.003233 GCCAGCCCTTCGTCTTTCT 60.003 57.895 0.00 0.00 0.00 2.52
4905 5150 1.021920 GCCAGCCCTTCGTCTTTCTC 61.022 60.000 0.00 0.00 0.00 2.87
4906 5151 0.391793 CCAGCCCTTCGTCTTTCTCC 60.392 60.000 0.00 0.00 0.00 3.71
4907 5152 0.610687 CAGCCCTTCGTCTTTCTCCT 59.389 55.000 0.00 0.00 0.00 3.69
4908 5153 1.002544 CAGCCCTTCGTCTTTCTCCTT 59.997 52.381 0.00 0.00 0.00 3.36
4909 5154 1.276705 AGCCCTTCGTCTTTCTCCTTC 59.723 52.381 0.00 0.00 0.00 3.46
4910 5155 1.002087 GCCCTTCGTCTTTCTCCTTCA 59.998 52.381 0.00 0.00 0.00 3.02
4911 5156 2.550208 GCCCTTCGTCTTTCTCCTTCAA 60.550 50.000 0.00 0.00 0.00 2.69
4912 5157 3.740115 CCCTTCGTCTTTCTCCTTCAAA 58.260 45.455 0.00 0.00 0.00 2.69
4913 5158 4.327680 CCCTTCGTCTTTCTCCTTCAAAT 58.672 43.478 0.00 0.00 0.00 2.32
4914 5159 4.393371 CCCTTCGTCTTTCTCCTTCAAATC 59.607 45.833 0.00 0.00 0.00 2.17
4915 5160 4.393371 CCTTCGTCTTTCTCCTTCAAATCC 59.607 45.833 0.00 0.00 0.00 3.01
4916 5161 3.939066 TCGTCTTTCTCCTTCAAATCCC 58.061 45.455 0.00 0.00 0.00 3.85
4917 5162 2.673368 CGTCTTTCTCCTTCAAATCCCG 59.327 50.000 0.00 0.00 0.00 5.14
4918 5163 2.420372 GTCTTTCTCCTTCAAATCCCGC 59.580 50.000 0.00 0.00 0.00 6.13
4919 5164 1.745653 CTTTCTCCTTCAAATCCCGCC 59.254 52.381 0.00 0.00 0.00 6.13
4920 5165 0.392461 TTCTCCTTCAAATCCCGCCG 60.392 55.000 0.00 0.00 0.00 6.46
4921 5166 1.819632 CTCCTTCAAATCCCGCCGG 60.820 63.158 0.00 0.00 0.00 6.13
4922 5167 3.518068 CCTTCAAATCCCGCCGGC 61.518 66.667 19.07 19.07 0.00 6.13
4923 5168 3.876198 CTTCAAATCCCGCCGGCG 61.876 66.667 41.00 41.00 39.44 6.46
4938 5183 4.228567 GCGGCTAGCTCCAGTCCC 62.229 72.222 15.72 0.00 44.04 4.46
4939 5184 3.905678 CGGCTAGCTCCAGTCCCG 61.906 72.222 15.72 2.83 0.00 5.14
4940 5185 4.228567 GGCTAGCTCCAGTCCCGC 62.229 72.222 15.72 0.00 0.00 6.13
4941 5186 4.577246 GCTAGCTCCAGTCCCGCG 62.577 72.222 7.70 0.00 0.00 6.46
4942 5187 4.577246 CTAGCTCCAGTCCCGCGC 62.577 72.222 0.00 0.00 0.00 6.86
4946 5191 3.842923 CTCCAGTCCCGCGCAGAT 61.843 66.667 8.75 0.00 0.00 2.90
4947 5192 3.781770 CTCCAGTCCCGCGCAGATC 62.782 68.421 8.75 0.00 0.00 2.75
4948 5193 4.899239 CCAGTCCCGCGCAGATCC 62.899 72.222 8.75 0.00 0.00 3.36
4949 5194 4.899239 CAGTCCCGCGCAGATCCC 62.899 72.222 8.75 0.00 0.00 3.85
4951 5196 3.224324 GTCCCGCGCAGATCCCTA 61.224 66.667 8.75 0.00 0.00 3.53
4952 5197 2.203640 TCCCGCGCAGATCCCTAT 60.204 61.111 8.75 0.00 0.00 2.57
4953 5198 2.262915 CCCGCGCAGATCCCTATC 59.737 66.667 8.75 0.00 0.00 2.08
4954 5199 2.279069 CCCGCGCAGATCCCTATCT 61.279 63.158 8.75 0.00 43.54 1.98
4955 5200 1.214062 CCGCGCAGATCCCTATCTC 59.786 63.158 8.75 0.00 40.65 2.75
4956 5201 1.214062 CGCGCAGATCCCTATCTCC 59.786 63.158 8.75 0.00 40.65 3.71
4957 5202 1.527433 CGCGCAGATCCCTATCTCCA 61.527 60.000 8.75 0.00 40.65 3.86
4958 5203 0.681733 GCGCAGATCCCTATCTCCAA 59.318 55.000 0.30 0.00 40.65 3.53
4959 5204 1.606737 GCGCAGATCCCTATCTCCAAC 60.607 57.143 0.30 0.00 40.65 3.77
4960 5205 1.001406 CGCAGATCCCTATCTCCAACC 59.999 57.143 0.00 0.00 40.65 3.77
4961 5206 2.334023 GCAGATCCCTATCTCCAACCT 58.666 52.381 0.00 0.00 40.65 3.50
4962 5207 2.301583 GCAGATCCCTATCTCCAACCTC 59.698 54.545 0.00 0.00 40.65 3.85
4963 5208 3.581101 CAGATCCCTATCTCCAACCTCA 58.419 50.000 0.00 0.00 40.65 3.86
4964 5209 3.577848 CAGATCCCTATCTCCAACCTCAG 59.422 52.174 0.00 0.00 40.65 3.35
4965 5210 1.794714 TCCCTATCTCCAACCTCAGC 58.205 55.000 0.00 0.00 0.00 4.26
4966 5211 0.761802 CCCTATCTCCAACCTCAGCC 59.238 60.000 0.00 0.00 0.00 4.85
4967 5212 0.761802 CCTATCTCCAACCTCAGCCC 59.238 60.000 0.00 0.00 0.00 5.19
4968 5213 1.500474 CTATCTCCAACCTCAGCCCA 58.500 55.000 0.00 0.00 0.00 5.36
4969 5214 2.053244 CTATCTCCAACCTCAGCCCAT 58.947 52.381 0.00 0.00 0.00 4.00
4970 5215 1.302907 ATCTCCAACCTCAGCCCATT 58.697 50.000 0.00 0.00 0.00 3.16
4971 5216 0.620556 TCTCCAACCTCAGCCCATTC 59.379 55.000 0.00 0.00 0.00 2.67
4972 5217 0.394899 CTCCAACCTCAGCCCATTCC 60.395 60.000 0.00 0.00 0.00 3.01
4973 5218 1.139498 TCCAACCTCAGCCCATTCCA 61.139 55.000 0.00 0.00 0.00 3.53
4974 5219 0.251742 CCAACCTCAGCCCATTCCAA 60.252 55.000 0.00 0.00 0.00 3.53
4975 5220 0.890683 CAACCTCAGCCCATTCCAAC 59.109 55.000 0.00 0.00 0.00 3.77
4976 5221 0.251787 AACCTCAGCCCATTCCAACC 60.252 55.000 0.00 0.00 0.00 3.77
4977 5222 1.380380 CCTCAGCCCATTCCAACCC 60.380 63.158 0.00 0.00 0.00 4.11
4978 5223 1.380380 CTCAGCCCATTCCAACCCC 60.380 63.158 0.00 0.00 0.00 4.95
4979 5224 2.364186 CAGCCCATTCCAACCCCC 60.364 66.667 0.00 0.00 0.00 5.40
4980 5225 2.537959 AGCCCATTCCAACCCCCT 60.538 61.111 0.00 0.00 0.00 4.79
4981 5226 2.176812 AGCCCATTCCAACCCCCTT 61.177 57.895 0.00 0.00 0.00 3.95
4982 5227 1.229496 GCCCATTCCAACCCCCTTT 60.229 57.895 0.00 0.00 0.00 3.11
4983 5228 1.552799 GCCCATTCCAACCCCCTTTG 61.553 60.000 0.00 0.00 0.00 2.77
4984 5229 1.552799 CCCATTCCAACCCCCTTTGC 61.553 60.000 0.00 0.00 0.00 3.68
4985 5230 0.545071 CCATTCCAACCCCCTTTGCT 60.545 55.000 0.00 0.00 0.00 3.91
4986 5231 0.609662 CATTCCAACCCCCTTTGCTG 59.390 55.000 0.00 0.00 0.00 4.41
4987 5232 1.194121 ATTCCAACCCCCTTTGCTGC 61.194 55.000 0.00 0.00 0.00 5.25
4988 5233 3.313524 CCAACCCCCTTTGCTGCC 61.314 66.667 0.00 0.00 0.00 4.85
4989 5234 3.313524 CAACCCCCTTTGCTGCCC 61.314 66.667 0.00 0.00 0.00 5.36
4990 5235 4.638895 AACCCCCTTTGCTGCCCC 62.639 66.667 0.00 0.00 0.00 5.80
5003 5248 2.361737 GCCCCTGGCTGAAGGTTC 60.362 66.667 0.00 0.00 46.69 3.62
5004 5249 2.356667 CCCCTGGCTGAAGGTTCC 59.643 66.667 0.00 0.00 35.34 3.62
5005 5250 2.045926 CCCTGGCTGAAGGTTCCG 60.046 66.667 0.00 0.00 35.34 4.30
5006 5251 2.747855 CCTGGCTGAAGGTTCCGC 60.748 66.667 0.00 0.00 36.79 5.54
5023 5268 3.382832 CCCCGGCGAGACAGAGTT 61.383 66.667 9.30 0.00 0.00 3.01
5024 5269 2.125912 CCCGGCGAGACAGAGTTG 60.126 66.667 9.30 0.00 0.00 3.16
5025 5270 2.125912 CCGGCGAGACAGAGTTGG 60.126 66.667 9.30 0.00 0.00 3.77
5026 5271 2.636412 CCGGCGAGACAGAGTTGGA 61.636 63.158 9.30 0.00 0.00 3.53
5027 5272 1.289066 CGGCGAGACAGAGTTGGAA 59.711 57.895 0.00 0.00 0.00 3.53
5028 5273 0.108615 CGGCGAGACAGAGTTGGAAT 60.109 55.000 0.00 0.00 0.00 3.01
5029 5274 1.673033 CGGCGAGACAGAGTTGGAATT 60.673 52.381 0.00 0.00 0.00 2.17
5030 5275 2.003301 GGCGAGACAGAGTTGGAATTC 58.997 52.381 0.00 0.00 0.00 2.17
5031 5276 1.656095 GCGAGACAGAGTTGGAATTCG 59.344 52.381 0.00 0.00 0.00 3.34
5032 5277 1.656095 CGAGACAGAGTTGGAATTCGC 59.344 52.381 0.00 0.00 0.00 4.70
5033 5278 2.003301 GAGACAGAGTTGGAATTCGCC 58.997 52.381 0.00 0.00 0.00 5.54
5034 5279 1.347707 AGACAGAGTTGGAATTCGCCA 59.652 47.619 0.00 0.00 35.78 5.69
5035 5280 2.026822 AGACAGAGTTGGAATTCGCCAT 60.027 45.455 0.00 0.00 37.86 4.40
5036 5281 2.086869 ACAGAGTTGGAATTCGCCATG 58.913 47.619 0.00 0.00 37.86 3.66
5037 5282 1.402968 CAGAGTTGGAATTCGCCATGG 59.597 52.381 7.63 7.63 37.86 3.66
5038 5283 1.281867 AGAGTTGGAATTCGCCATGGA 59.718 47.619 18.40 0.00 37.86 3.41
5039 5284 2.092212 AGAGTTGGAATTCGCCATGGAT 60.092 45.455 18.40 0.00 37.86 3.41
5040 5285 3.136443 AGAGTTGGAATTCGCCATGGATA 59.864 43.478 18.40 0.00 37.86 2.59
5041 5286 3.214328 AGTTGGAATTCGCCATGGATAC 58.786 45.455 18.40 0.00 37.86 2.24
5042 5287 1.877637 TGGAATTCGCCATGGATACG 58.122 50.000 18.40 10.19 33.17 3.06
5043 5288 0.517316 GGAATTCGCCATGGATACGC 59.483 55.000 18.40 0.00 42.51 4.42
5044 5289 0.517316 GAATTCGCCATGGATACGCC 59.483 55.000 18.40 0.00 42.51 5.68
5045 5290 1.227999 AATTCGCCATGGATACGCCG 61.228 55.000 18.40 8.53 40.66 6.46
5046 5291 2.377628 ATTCGCCATGGATACGCCGT 62.378 55.000 18.40 0.00 40.66 5.68
5047 5292 2.964438 TTCGCCATGGATACGCCGTC 62.964 60.000 18.40 0.00 40.66 4.79
5048 5293 2.665185 GCCATGGATACGCCGTCC 60.665 66.667 18.40 0.00 40.66 4.79
5049 5294 2.355837 CCATGGATACGCCGTCCG 60.356 66.667 5.56 0.00 40.66 4.79
5050 5295 3.036084 CATGGATACGCCGTCCGC 61.036 66.667 0.00 0.00 41.76 5.54
5062 5307 3.482783 GTCCGCGAACTGCTGCTC 61.483 66.667 8.23 0.00 43.27 4.26
5063 5308 3.989787 TCCGCGAACTGCTGCTCA 61.990 61.111 8.23 0.00 43.27 4.26
5064 5309 3.782244 CCGCGAACTGCTGCTCAC 61.782 66.667 8.23 0.00 43.27 3.51
5065 5310 3.037833 CGCGAACTGCTGCTCACA 61.038 61.111 0.00 0.00 43.27 3.58
5070 5315 4.787871 ACTGCTGCTCACAGTTCC 57.212 55.556 0.00 0.00 46.01 3.62
5071 5316 2.140405 ACTGCTGCTCACAGTTCCT 58.860 52.632 0.00 0.00 46.01 3.36
5072 5317 0.471617 ACTGCTGCTCACAGTTCCTT 59.528 50.000 0.00 0.00 46.01 3.36
5073 5318 0.873054 CTGCTGCTCACAGTTCCTTG 59.127 55.000 0.00 0.00 46.30 3.61
5074 5319 0.181114 TGCTGCTCACAGTTCCTTGT 59.819 50.000 0.00 0.00 46.30 3.16
5076 5321 0.590195 CTGCTCACAGTTCCTTGTGC 59.410 55.000 1.43 0.00 46.24 4.57
5077 5322 0.181114 TGCTCACAGTTCCTTGTGCT 59.819 50.000 1.43 0.00 46.24 4.40
5078 5323 0.590195 GCTCACAGTTCCTTGTGCTG 59.410 55.000 1.43 0.00 46.24 4.41
5079 5324 1.233019 CTCACAGTTCCTTGTGCTGG 58.767 55.000 1.43 0.00 46.24 4.85
5080 5325 0.836606 TCACAGTTCCTTGTGCTGGA 59.163 50.000 1.43 0.00 46.24 3.86
5081 5326 1.211703 TCACAGTTCCTTGTGCTGGAA 59.788 47.619 1.43 0.00 46.24 3.53
5084 5329 4.473643 TTCCTTGTGCTGGAACCG 57.526 55.556 0.00 0.00 38.53 4.44
5085 5330 1.529796 TTCCTTGTGCTGGAACCGT 59.470 52.632 0.00 0.00 38.53 4.83
5086 5331 0.534203 TTCCTTGTGCTGGAACCGTC 60.534 55.000 0.00 0.00 38.53 4.79
5087 5332 1.966451 CCTTGTGCTGGAACCGTCC 60.966 63.158 0.00 0.00 45.21 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 3.519774 CGTTGTCGGTGTCAAAACC 57.480 52.632 0.00 0.00 36.82 3.27
68 69 4.129737 GCCGTAGTGCTCTCGCCA 62.130 66.667 0.00 0.00 34.43 5.69
69 70 4.874977 GGCCGTAGTGCTCTCGCC 62.875 72.222 5.90 5.90 34.43 5.54
130 132 4.856607 CGCTCGCTCGTTCTCCCC 62.857 72.222 0.00 0.00 0.00 4.81
133 135 2.876645 CACCGCTCGCTCGTTCTC 60.877 66.667 0.00 0.00 0.00 2.87
138 140 3.805307 ACTCTCACCGCTCGCTCG 61.805 66.667 0.00 0.00 0.00 5.03
146 148 0.670546 ATTTCGTGCCACTCTCACCG 60.671 55.000 0.00 0.00 0.00 4.94
148 150 2.143122 TGAATTTCGTGCCACTCTCAC 58.857 47.619 0.00 0.00 0.00 3.51
149 151 2.542020 TGAATTTCGTGCCACTCTCA 57.458 45.000 0.00 0.00 0.00 3.27
150 152 3.896648 TTTGAATTTCGTGCCACTCTC 57.103 42.857 0.00 0.00 0.00 3.20
151 153 3.632145 AGTTTTGAATTTCGTGCCACTCT 59.368 39.130 0.00 0.00 0.00 3.24
152 154 3.730715 CAGTTTTGAATTTCGTGCCACTC 59.269 43.478 0.00 0.00 0.00 3.51
160 327 2.403259 GGTGGGCAGTTTTGAATTTCG 58.597 47.619 0.00 0.00 0.00 3.46
168 335 4.531426 TGGGCGGTGGGCAGTTTT 62.531 61.111 0.00 0.00 46.16 2.43
193 361 5.104360 AGGTATACCAGTTAGTCACCGTAGA 60.104 44.000 23.87 0.00 38.89 2.59
194 362 5.128919 AGGTATACCAGTTAGTCACCGTAG 58.871 45.833 23.87 0.00 38.89 3.51
201 369 5.429957 CCGTGTAGGTATACCAGTTAGTC 57.570 47.826 23.87 6.53 38.89 2.59
222 390 0.741221 GGCTTGTCCTGTCATCGACC 60.741 60.000 0.00 0.00 0.00 4.79
305 473 0.685097 TCTGGTCGGTTTCTCCCTTG 59.315 55.000 0.00 0.00 0.00 3.61
306 474 1.657804 ATCTGGTCGGTTTCTCCCTT 58.342 50.000 0.00 0.00 0.00 3.95
307 475 2.500504 GTTATCTGGTCGGTTTCTCCCT 59.499 50.000 0.00 0.00 0.00 4.20
361 529 3.834799 GGCCTCGAACCGTCCGAT 61.835 66.667 0.00 0.00 35.35 4.18
376 544 2.083835 TATAGTCTCAAGCGGCCGGC 62.084 60.000 29.38 21.18 44.05 6.13
378 546 0.039074 CCTATAGTCTCAAGCGGCCG 60.039 60.000 24.05 24.05 0.00 6.13
379 547 0.319986 GCCTATAGTCTCAAGCGGCC 60.320 60.000 0.00 0.00 0.00 6.13
381 549 0.952280 TCGCCTATAGTCTCAAGCGG 59.048 55.000 15.61 2.14 43.50 5.52
383 551 1.664588 CGCTCGCCTATAGTCTCAAGC 60.665 57.143 0.00 0.23 0.00 4.01
384 552 1.664588 GCGCTCGCCTATAGTCTCAAG 60.665 57.143 0.00 0.00 34.56 3.02
385 553 0.311165 GCGCTCGCCTATAGTCTCAA 59.689 55.000 0.00 0.00 34.56 3.02
387 555 0.386226 GTGCGCTCGCCTATAGTCTC 60.386 60.000 9.73 0.00 41.09 3.36
405 574 3.970610 CGTAAATACATACTAGTGCGCGT 59.029 43.478 8.43 0.00 0.00 6.01
462 633 5.468540 AGGCTGTTTACCATTTCCTTTTC 57.531 39.130 0.00 0.00 0.00 2.29
466 637 7.553504 AAATTTAGGCTGTTTACCATTTCCT 57.446 32.000 0.00 0.00 0.00 3.36
467 638 8.503196 CAAAAATTTAGGCTGTTTACCATTTCC 58.497 33.333 0.00 0.00 0.00 3.13
468 639 9.267084 TCAAAAATTTAGGCTGTTTACCATTTC 57.733 29.630 0.00 0.00 0.00 2.17
469 640 9.051679 GTCAAAAATTTAGGCTGTTTACCATTT 57.948 29.630 0.00 0.00 0.00 2.32
506 677 2.038557 TGCCGAATAGGAGATTTAGGCC 59.961 50.000 0.00 0.00 45.00 5.19
562 742 1.001378 GAGATGCGGCTGTGTTTTGTT 60.001 47.619 0.00 0.00 0.00 2.83
633 817 0.842030 AGACATTGGGGAGACTGCCA 60.842 55.000 15.68 0.00 0.00 4.92
747 935 1.071385 GGAGACCCGGTATCGAGTAGA 59.929 57.143 6.11 0.00 39.00 2.59
749 937 3.713902 GGAGACCCGGTATCGAGTA 57.286 57.895 6.11 0.00 39.00 2.59
830 1028 1.690985 GGGGAGAGGACAAGGGAGG 60.691 68.421 0.00 0.00 0.00 4.30
834 1032 1.062121 TGGATAGGGGAGAGGACAAGG 60.062 57.143 0.00 0.00 0.00 3.61
841 1043 0.493639 TGGGGATGGATAGGGGAGAG 59.506 60.000 0.00 0.00 0.00 3.20
849 1051 5.190528 GCTCTTATTGAGATGGGGATGGATA 59.809 44.000 0.00 0.00 45.39 2.59
863 1065 1.340017 GCTGGTGGGTGCTCTTATTGA 60.340 52.381 0.00 0.00 0.00 2.57
938 1140 3.148279 GGCGAGTCGGGGTCAGAT 61.148 66.667 15.52 0.00 0.00 2.90
1049 1252 3.901797 GACGGGGACACCAGCAAGG 62.902 68.421 0.00 0.00 45.67 3.61
1050 1253 2.358737 GACGGGGACACCAGCAAG 60.359 66.667 0.00 0.00 40.22 4.01
1051 1254 4.308458 CGACGGGGACACCAGCAA 62.308 66.667 0.00 0.00 40.22 3.91
1054 1257 4.436998 GAGCGACGGGGACACCAG 62.437 72.222 0.00 0.00 40.22 4.00
1584 1793 1.611592 CCGGAGCGAACGTGTTGTAC 61.612 60.000 0.00 0.00 0.00 2.90
1896 2105 0.104120 CGAACAGGTCATGCGGGATA 59.896 55.000 0.00 0.00 0.00 2.59
1903 2112 2.456119 GCGCCTCGAACAGGTCATG 61.456 63.158 0.00 0.00 45.61 3.07
2049 2258 1.134560 GGCGTGTTCTTACCGAGATCT 59.865 52.381 0.00 0.00 33.49 2.75
2058 2267 1.666553 CACCAGCGGCGTGTTCTTA 60.667 57.895 9.37 0.00 0.00 2.10
2094 2303 0.106868 TCTCGCCGGAGATGGAGTTA 60.107 55.000 8.83 0.00 44.28 2.24
2171 2380 2.662596 GGATGTGACCGGTGAGCA 59.337 61.111 14.63 8.50 0.00 4.26
2241 2450 4.595538 ACGTTGCCGTCGAGCCAA 62.596 61.111 0.00 0.00 46.28 4.52
2517 2726 1.661112 GATAGCGAGTTGTTGTGGAGC 59.339 52.381 0.00 0.00 0.00 4.70
2676 2885 2.267961 GGTACTTGGCCGGTGAGG 59.732 66.667 1.90 0.00 44.97 3.86
2898 3107 3.241773 CGACAGCCGCGAATATGAATATG 60.242 47.826 8.23 0.00 0.00 1.78
3027 3236 2.097680 TGTCATGCTCGCTGAATGAA 57.902 45.000 1.31 0.00 42.08 2.57
3045 3254 1.211212 TCATCAAGGCAGTCCAGGATG 59.789 52.381 0.00 0.00 42.08 3.51
3102 3311 2.047655 CCGAGCACCGCCTTGTAA 60.048 61.111 0.00 0.00 36.84 2.41
3163 3372 3.040795 CGTTCTCGACGTCTTTCTTCAA 58.959 45.455 14.70 0.00 46.49 2.69
3164 3373 2.647337 CGTTCTCGACGTCTTTCTTCA 58.353 47.619 14.70 0.00 46.49 3.02
3195 3404 2.434884 CTGTTGTCTGCCGCCGAT 60.435 61.111 0.00 0.00 0.00 4.18
3204 3413 1.004440 GGCCTCGAAGCTGTTGTCT 60.004 57.895 5.89 0.00 0.00 3.41
3351 3560 2.038975 AGACCGGCCTTCCTGCTA 59.961 61.111 0.00 0.00 0.00 3.49
3357 3566 2.543067 AATCCAGCAGACCGGCCTTC 62.543 60.000 0.00 0.00 0.00 3.46
3444 3653 2.184322 CTGTGGACGATCACCGGG 59.816 66.667 6.32 0.00 43.93 5.73
3449 3658 0.824109 GACATCCCTGTGGACGATCA 59.176 55.000 0.00 0.00 45.58 2.92
3573 3782 2.584418 CAGGAGCCAGCGATCACG 60.584 66.667 0.00 0.00 42.93 4.35
3597 3806 5.483937 TCAGAAAGTCTTACCAGGAGCAATA 59.516 40.000 0.00 0.00 0.00 1.90
3630 3839 8.692710 TCATCAACGGACTAATAACTGAACTAT 58.307 33.333 0.00 0.00 0.00 2.12
3631 3840 8.058667 TCATCAACGGACTAATAACTGAACTA 57.941 34.615 0.00 0.00 0.00 2.24
3649 3858 7.382488 AGACTTACATGCACGTATATCATCAAC 59.618 37.037 0.00 0.00 0.00 3.18
3680 3889 9.204570 GTACTCTGCACAAATAAGAAGAACTAA 57.795 33.333 0.00 0.00 0.00 2.24
3681 3890 7.541091 CGTACTCTGCACAAATAAGAAGAACTA 59.459 37.037 0.00 0.00 0.00 2.24
3683 3892 6.526222 CGTACTCTGCACAAATAAGAAGAAC 58.474 40.000 0.00 0.00 0.00 3.01
3684 3893 5.120208 GCGTACTCTGCACAAATAAGAAGAA 59.880 40.000 0.00 0.00 0.00 2.52
3686 3895 4.490959 CGCGTACTCTGCACAAATAAGAAG 60.491 45.833 0.00 0.00 0.00 2.85
3799 4009 1.153804 GTCCTTCTCGCCGAACTCC 60.154 63.158 0.00 0.00 0.00 3.85
3818 4028 0.751277 CTGCACACCCACTTCACCAA 60.751 55.000 0.00 0.00 0.00 3.67
3856 4066 0.251209 TGTCCAGGACGTGCTCTACT 60.251 55.000 15.24 0.00 34.95 2.57
4044 4254 1.066215 TGTCGTCGTAGTAGTAGGGCA 60.066 52.381 3.05 0.00 0.00 5.36
4048 4258 2.863137 GGAGGTGTCGTCGTAGTAGTAG 59.137 54.545 0.00 0.00 0.00 2.57
4087 4297 2.497273 TCCGTGGCTTACCTTTACCTAC 59.503 50.000 0.00 0.00 36.63 3.18
4095 4305 1.134491 GTTATGCTCCGTGGCTTACCT 60.134 52.381 0.00 0.00 36.63 3.08
4097 4307 1.664151 GTGTTATGCTCCGTGGCTTAC 59.336 52.381 0.00 0.00 0.00 2.34
4098 4308 1.737696 CGTGTTATGCTCCGTGGCTTA 60.738 52.381 0.00 0.00 0.00 3.09
4101 4311 1.296056 AACGTGTTATGCTCCGTGGC 61.296 55.000 0.00 0.00 33.22 5.01
4102 4312 0.442310 CAACGTGTTATGCTCCGTGG 59.558 55.000 0.00 0.00 33.22 4.94
4103 4313 0.442310 CCAACGTGTTATGCTCCGTG 59.558 55.000 0.00 0.00 33.22 4.94
4104 4314 1.296056 GCCAACGTGTTATGCTCCGT 61.296 55.000 0.00 0.00 34.56 4.69
4106 4316 1.654023 GGGCCAACGTGTTATGCTCC 61.654 60.000 4.39 0.00 0.00 4.70
4149 4389 0.037303 CGGGCCATGATTCTATGCCT 59.963 55.000 4.39 0.00 0.00 4.75
4152 4392 3.186409 CGTAAACGGGCCATGATTCTATG 59.814 47.826 4.39 0.00 35.37 2.23
4154 4394 2.828877 CGTAAACGGGCCATGATTCTA 58.171 47.619 4.39 0.00 35.37 2.10
4155 4395 1.663695 CGTAAACGGGCCATGATTCT 58.336 50.000 4.39 0.00 35.37 2.40
4156 4396 0.028902 GCGTAAACGGGCCATGATTC 59.971 55.000 4.39 0.00 40.23 2.52
4164 4404 1.788067 AACTTGTGGCGTAAACGGGC 61.788 55.000 4.49 0.00 40.23 6.13
4165 4405 0.040781 CAACTTGTGGCGTAAACGGG 60.041 55.000 4.49 0.00 40.23 5.28
4166 4406 0.659123 GCAACTTGTGGCGTAAACGG 60.659 55.000 4.49 0.00 40.23 4.44
4167 4407 0.659123 GGCAACTTGTGGCGTAAACG 60.659 55.000 0.00 0.00 43.81 3.60
4168 4408 3.173247 GGCAACTTGTGGCGTAAAC 57.827 52.632 0.00 0.00 43.81 2.01
4175 4415 1.588674 TAACTCGTGGCAACTTGTGG 58.411 50.000 0.00 0.00 37.61 4.17
4177 4417 1.602377 GCTTAACTCGTGGCAACTTGT 59.398 47.619 0.00 0.00 37.61 3.16
4178 4418 1.873591 AGCTTAACTCGTGGCAACTTG 59.126 47.619 0.00 0.00 37.61 3.16
4179 4419 2.256117 AGCTTAACTCGTGGCAACTT 57.744 45.000 0.00 0.00 37.61 2.66
4180 4420 3.396260 TTAGCTTAACTCGTGGCAACT 57.604 42.857 0.00 0.00 37.61 3.16
4181 4421 3.241995 CGATTAGCTTAACTCGTGGCAAC 60.242 47.826 0.00 0.00 0.00 4.17
4182 4422 2.927477 CGATTAGCTTAACTCGTGGCAA 59.073 45.455 0.00 0.00 0.00 4.52
4183 4423 2.536365 CGATTAGCTTAACTCGTGGCA 58.464 47.619 0.00 0.00 0.00 4.92
4184 4424 1.859080 CCGATTAGCTTAACTCGTGGC 59.141 52.381 0.00 0.00 0.00 5.01
4185 4425 2.159142 ACCCGATTAGCTTAACTCGTGG 60.159 50.000 0.00 2.72 0.00 4.94
4186 4426 3.160777 ACCCGATTAGCTTAACTCGTG 57.839 47.619 0.00 0.00 0.00 4.35
4187 4427 4.989279 TTACCCGATTAGCTTAACTCGT 57.011 40.909 0.00 0.00 0.00 4.18
4188 4428 6.144080 CAGATTTACCCGATTAGCTTAACTCG 59.856 42.308 0.00 0.00 0.00 4.18
4189 4429 6.424207 CCAGATTTACCCGATTAGCTTAACTC 59.576 42.308 0.00 0.00 0.00 3.01
4190 4430 6.099269 TCCAGATTTACCCGATTAGCTTAACT 59.901 38.462 0.00 0.00 0.00 2.24
4191 4431 6.285990 TCCAGATTTACCCGATTAGCTTAAC 58.714 40.000 0.00 0.00 0.00 2.01
4192 4432 6.099269 ACTCCAGATTTACCCGATTAGCTTAA 59.901 38.462 0.00 0.00 0.00 1.85
4193 4433 5.601313 ACTCCAGATTTACCCGATTAGCTTA 59.399 40.000 0.00 0.00 0.00 3.09
4194 4434 4.409247 ACTCCAGATTTACCCGATTAGCTT 59.591 41.667 0.00 0.00 0.00 3.74
4195 4435 3.967987 ACTCCAGATTTACCCGATTAGCT 59.032 43.478 0.00 0.00 0.00 3.32
4196 4436 4.058817 CACTCCAGATTTACCCGATTAGC 58.941 47.826 0.00 0.00 0.00 3.09
4197 4437 4.058817 GCACTCCAGATTTACCCGATTAG 58.941 47.826 0.00 0.00 0.00 1.73
4198 4438 3.709653 AGCACTCCAGATTTACCCGATTA 59.290 43.478 0.00 0.00 0.00 1.75
4199 4439 2.505819 AGCACTCCAGATTTACCCGATT 59.494 45.455 0.00 0.00 0.00 3.34
4200 4440 2.119495 AGCACTCCAGATTTACCCGAT 58.881 47.619 0.00 0.00 0.00 4.18
4201 4441 1.207089 CAGCACTCCAGATTTACCCGA 59.793 52.381 0.00 0.00 0.00 5.14
4202 4442 1.207089 TCAGCACTCCAGATTTACCCG 59.793 52.381 0.00 0.00 0.00 5.28
4203 4443 3.567478 ATCAGCACTCCAGATTTACCC 57.433 47.619 0.00 0.00 0.00 3.69
4204 4444 5.415701 TCAAAATCAGCACTCCAGATTTACC 59.584 40.000 0.00 0.00 40.11 2.85
4205 4445 6.317857 GTCAAAATCAGCACTCCAGATTTAC 58.682 40.000 0.00 0.00 40.11 2.01
4206 4446 5.415701 GGTCAAAATCAGCACTCCAGATTTA 59.584 40.000 0.00 0.00 40.11 1.40
4207 4447 4.219288 GGTCAAAATCAGCACTCCAGATTT 59.781 41.667 0.00 0.00 42.10 2.17
4208 4448 3.760684 GGTCAAAATCAGCACTCCAGATT 59.239 43.478 0.00 0.00 33.68 2.40
4209 4449 3.350833 GGTCAAAATCAGCACTCCAGAT 58.649 45.455 0.00 0.00 0.00 2.90
4210 4450 2.783135 GGTCAAAATCAGCACTCCAGA 58.217 47.619 0.00 0.00 0.00 3.86
4211 4451 1.466167 CGGTCAAAATCAGCACTCCAG 59.534 52.381 0.00 0.00 0.00 3.86
4212 4452 1.522668 CGGTCAAAATCAGCACTCCA 58.477 50.000 0.00 0.00 0.00 3.86
4213 4453 0.169009 GCGGTCAAAATCAGCACTCC 59.831 55.000 0.00 0.00 0.00 3.85
4214 4454 1.135859 CAGCGGTCAAAATCAGCACTC 60.136 52.381 0.00 0.00 0.00 3.51
4258 4498 3.118454 CCAGGTTACAGTGGCGCG 61.118 66.667 0.00 0.00 0.00 6.86
4269 4509 1.143684 AGCACACATCAACTCCAGGTT 59.856 47.619 0.00 0.00 38.93 3.50
4294 4534 3.781307 TCCTCCATTGCCGACCGG 61.781 66.667 0.00 0.00 38.57 5.28
4360 4602 2.650116 CGGCCCACAGACAGCTAGT 61.650 63.158 0.00 0.00 0.00 2.57
4391 4633 4.480115 CATACAGACCATCTACCCTACCA 58.520 47.826 0.00 0.00 0.00 3.25
4511 4756 7.804843 TGGAGCAAACATTTCATTTCATTTT 57.195 28.000 0.00 0.00 0.00 1.82
4512 4757 7.574217 GCATGGAGCAAACATTTCATTTCATTT 60.574 33.333 0.00 0.00 44.79 2.32
4513 4758 6.128117 GCATGGAGCAAACATTTCATTTCATT 60.128 34.615 0.00 0.00 44.79 2.57
4514 4759 5.353123 GCATGGAGCAAACATTTCATTTCAT 59.647 36.000 0.00 0.00 44.79 2.57
4515 4760 4.691685 GCATGGAGCAAACATTTCATTTCA 59.308 37.500 0.00 0.00 44.79 2.69
4639 4884 2.973316 GCGCCGATCCCAAACGTTT 61.973 57.895 7.96 7.96 0.00 3.60
4640 4885 3.428282 GCGCCGATCCCAAACGTT 61.428 61.111 0.00 0.00 0.00 3.99
4641 4886 4.690719 TGCGCCGATCCCAAACGT 62.691 61.111 4.18 0.00 0.00 3.99
4642 4887 4.160635 GTGCGCCGATCCCAAACG 62.161 66.667 4.18 0.00 0.00 3.60
4643 4888 3.810896 GGTGCGCCGATCCCAAAC 61.811 66.667 4.18 0.00 0.00 2.93
4692 4937 1.372838 CTTGTGTTGCGTGGTGTCCA 61.373 55.000 0.00 0.00 0.00 4.02
4693 4938 1.355210 CTTGTGTTGCGTGGTGTCC 59.645 57.895 0.00 0.00 0.00 4.02
4694 4939 1.355210 CCTTGTGTTGCGTGGTGTC 59.645 57.895 0.00 0.00 0.00 3.67
4695 4940 2.118404 CCCTTGTGTTGCGTGGTGT 61.118 57.895 0.00 0.00 0.00 4.16
4696 4941 2.721231 CCCTTGTGTTGCGTGGTG 59.279 61.111 0.00 0.00 0.00 4.17
4697 4942 3.216292 GCCCTTGTGTTGCGTGGT 61.216 61.111 0.00 0.00 0.00 4.16
4698 4943 3.977244 GGCCCTTGTGTTGCGTGG 61.977 66.667 0.00 0.00 0.00 4.94
4699 4944 3.977244 GGGCCCTTGTGTTGCGTG 61.977 66.667 17.04 0.00 0.00 5.34
4703 4948 3.977244 GTGCGGGCCCTTGTGTTG 61.977 66.667 22.43 2.66 0.00 3.33
4704 4949 4.514585 TGTGCGGGCCCTTGTGTT 62.515 61.111 22.43 0.00 0.00 3.32
4707 4952 4.954970 CTGTGTGCGGGCCCTTGT 62.955 66.667 22.43 0.00 0.00 3.16
4708 4953 4.954970 ACTGTGTGCGGGCCCTTG 62.955 66.667 22.43 6.20 0.00 3.61
4709 4954 4.643387 GACTGTGTGCGGGCCCTT 62.643 66.667 22.43 0.00 0.00 3.95
4713 4958 4.664677 AGACGACTGTGTGCGGGC 62.665 66.667 0.00 0.00 0.00 6.13
4714 4959 1.557443 GAAAGACGACTGTGTGCGGG 61.557 60.000 0.00 0.00 0.00 6.13
4715 4960 1.557443 GGAAAGACGACTGTGTGCGG 61.557 60.000 0.00 0.00 0.00 5.69
4716 4961 0.597637 AGGAAAGACGACTGTGTGCG 60.598 55.000 0.00 0.00 0.00 5.34
4717 4962 1.140816 GAGGAAAGACGACTGTGTGC 58.859 55.000 0.00 0.00 0.00 4.57
4718 4963 2.802787 AGAGGAAAGACGACTGTGTG 57.197 50.000 0.00 0.00 0.00 3.82
4719 4964 3.444388 GGATAGAGGAAAGACGACTGTGT 59.556 47.826 0.00 0.00 0.00 3.72
4720 4965 3.697045 AGGATAGAGGAAAGACGACTGTG 59.303 47.826 0.00 0.00 0.00 3.66
4721 4966 3.949113 GAGGATAGAGGAAAGACGACTGT 59.051 47.826 0.00 0.00 0.00 3.55
4722 4967 4.204012 AGAGGATAGAGGAAAGACGACTG 58.796 47.826 0.00 0.00 0.00 3.51
4723 4968 4.513406 AGAGGATAGAGGAAAGACGACT 57.487 45.455 0.00 0.00 0.00 4.18
4724 4969 4.885325 AGAAGAGGATAGAGGAAAGACGAC 59.115 45.833 0.00 0.00 0.00 4.34
4725 4970 5.118729 AGAAGAGGATAGAGGAAAGACGA 57.881 43.478 0.00 0.00 0.00 4.20
4726 4971 4.024387 CGAGAAGAGGATAGAGGAAAGACG 60.024 50.000 0.00 0.00 0.00 4.18
4727 4972 4.277423 CCGAGAAGAGGATAGAGGAAAGAC 59.723 50.000 0.00 0.00 0.00 3.01
4728 4973 4.465886 CCGAGAAGAGGATAGAGGAAAGA 58.534 47.826 0.00 0.00 0.00 2.52
4729 4974 3.572255 CCCGAGAAGAGGATAGAGGAAAG 59.428 52.174 0.00 0.00 0.00 2.62
4730 4975 3.567397 CCCGAGAAGAGGATAGAGGAAA 58.433 50.000 0.00 0.00 0.00 3.13
4731 4976 2.753507 GCCCGAGAAGAGGATAGAGGAA 60.754 54.545 0.00 0.00 0.00 3.36
4732 4977 1.202952 GCCCGAGAAGAGGATAGAGGA 60.203 57.143 0.00 0.00 0.00 3.71
4733 4978 1.253100 GCCCGAGAAGAGGATAGAGG 58.747 60.000 0.00 0.00 0.00 3.69
4734 4979 1.253100 GGCCCGAGAAGAGGATAGAG 58.747 60.000 0.00 0.00 0.00 2.43
4735 4980 0.537600 CGGCCCGAGAAGAGGATAGA 60.538 60.000 0.00 0.00 0.00 1.98
4736 4981 1.528292 CCGGCCCGAGAAGAGGATAG 61.528 65.000 3.71 0.00 0.00 2.08
4737 4982 1.530891 CCGGCCCGAGAAGAGGATA 60.531 63.158 3.71 0.00 0.00 2.59
4738 4983 2.840102 CCGGCCCGAGAAGAGGAT 60.840 66.667 3.71 0.00 0.00 3.24
4739 4984 4.377760 ACCGGCCCGAGAAGAGGA 62.378 66.667 3.71 0.00 0.00 3.71
4740 4985 3.839432 GACCGGCCCGAGAAGAGG 61.839 72.222 3.71 0.00 0.00 3.69
4741 4986 3.068691 TGACCGGCCCGAGAAGAG 61.069 66.667 3.71 0.00 0.00 2.85
4742 4987 3.379445 GTGACCGGCCCGAGAAGA 61.379 66.667 3.71 0.00 0.00 2.87
4743 4988 4.796231 CGTGACCGGCCCGAGAAG 62.796 72.222 3.71 0.00 0.00 2.85
4762 5007 3.267860 CTGGATCGCTTGGCTCGC 61.268 66.667 0.00 0.00 0.00 5.03
4763 5008 2.587194 CCTGGATCGCTTGGCTCG 60.587 66.667 0.00 0.00 0.00 5.03
4764 5009 2.899339 GCCTGGATCGCTTGGCTC 60.899 66.667 0.00 0.00 41.92 4.70
4765 5010 4.496336 GGCCTGGATCGCTTGGCT 62.496 66.667 13.76 0.00 44.36 4.75
4767 5012 3.426309 ATGGGCCTGGATCGCTTGG 62.426 63.158 4.53 0.00 0.00 3.61
4768 5013 1.895707 GATGGGCCTGGATCGCTTG 60.896 63.158 4.53 0.00 0.00 4.01
4769 5014 1.713005 ATGATGGGCCTGGATCGCTT 61.713 55.000 4.53 0.00 0.00 4.68
4770 5015 0.837691 TATGATGGGCCTGGATCGCT 60.838 55.000 4.53 0.00 0.00 4.93
4771 5016 0.674895 GTATGATGGGCCTGGATCGC 60.675 60.000 4.53 0.00 0.00 4.58
4772 5017 0.390340 CGTATGATGGGCCTGGATCG 60.390 60.000 4.53 0.00 0.00 3.69
4773 5018 0.687354 ACGTATGATGGGCCTGGATC 59.313 55.000 4.53 0.00 0.00 3.36
4774 5019 0.687354 GACGTATGATGGGCCTGGAT 59.313 55.000 4.53 0.00 0.00 3.41
4775 5020 0.398522 AGACGTATGATGGGCCTGGA 60.399 55.000 4.53 0.00 0.00 3.86
4776 5021 0.034059 GAGACGTATGATGGGCCTGG 59.966 60.000 4.53 0.00 0.00 4.45
4777 5022 1.043816 AGAGACGTATGATGGGCCTG 58.956 55.000 4.53 0.00 0.00 4.85
4778 5023 1.043816 CAGAGACGTATGATGGGCCT 58.956 55.000 4.53 0.00 0.00 5.19
4779 5024 0.601311 GCAGAGACGTATGATGGGCC 60.601 60.000 0.00 0.00 0.00 5.80
4780 5025 0.390860 AGCAGAGACGTATGATGGGC 59.609 55.000 0.00 0.00 0.00 5.36
4781 5026 1.683385 TGAGCAGAGACGTATGATGGG 59.317 52.381 0.00 0.00 0.00 4.00
4782 5027 2.544694 GGTGAGCAGAGACGTATGATGG 60.545 54.545 0.00 0.00 0.00 3.51
4783 5028 2.360483 AGGTGAGCAGAGACGTATGATG 59.640 50.000 0.00 0.00 0.00 3.07
4784 5029 2.621055 GAGGTGAGCAGAGACGTATGAT 59.379 50.000 0.00 0.00 0.00 2.45
4785 5030 2.017782 GAGGTGAGCAGAGACGTATGA 58.982 52.381 0.00 0.00 0.00 2.15
4786 5031 1.066303 GGAGGTGAGCAGAGACGTATG 59.934 57.143 0.00 0.00 0.00 2.39
4787 5032 1.064314 AGGAGGTGAGCAGAGACGTAT 60.064 52.381 0.00 0.00 0.00 3.06
4788 5033 0.328592 AGGAGGTGAGCAGAGACGTA 59.671 55.000 0.00 0.00 0.00 3.57
4789 5034 1.075836 AGGAGGTGAGCAGAGACGT 59.924 57.895 0.00 0.00 0.00 4.34
4790 5035 1.510383 CAGGAGGTGAGCAGAGACG 59.490 63.158 0.00 0.00 0.00 4.18
4791 5036 1.217779 GCAGGAGGTGAGCAGAGAC 59.782 63.158 0.00 0.00 0.00 3.36
4792 5037 1.986757 GGCAGGAGGTGAGCAGAGA 60.987 63.158 0.00 0.00 0.00 3.10
4793 5038 1.958902 GAGGCAGGAGGTGAGCAGAG 61.959 65.000 0.00 0.00 0.00 3.35
4794 5039 1.986757 GAGGCAGGAGGTGAGCAGA 60.987 63.158 0.00 0.00 0.00 4.26
4795 5040 2.288778 TGAGGCAGGAGGTGAGCAG 61.289 63.158 0.00 0.00 0.00 4.24
4796 5041 2.203832 TGAGGCAGGAGGTGAGCA 60.204 61.111 0.00 0.00 0.00 4.26
4797 5042 2.267324 GTGAGGCAGGAGGTGAGC 59.733 66.667 0.00 0.00 0.00 4.26
4798 5043 1.197430 AAGGTGAGGCAGGAGGTGAG 61.197 60.000 0.00 0.00 0.00 3.51
4799 5044 0.116342 TAAGGTGAGGCAGGAGGTGA 59.884 55.000 0.00 0.00 0.00 4.02
4800 5045 1.139853 GATAAGGTGAGGCAGGAGGTG 59.860 57.143 0.00 0.00 0.00 4.00
4801 5046 1.008938 AGATAAGGTGAGGCAGGAGGT 59.991 52.381 0.00 0.00 0.00 3.85
4802 5047 1.799933 AGATAAGGTGAGGCAGGAGG 58.200 55.000 0.00 0.00 0.00 4.30
4803 5048 3.037549 AGAAGATAAGGTGAGGCAGGAG 58.962 50.000 0.00 0.00 0.00 3.69
4804 5049 3.121929 AGAAGATAAGGTGAGGCAGGA 57.878 47.619 0.00 0.00 0.00 3.86
4805 5050 3.432890 GGAAGAAGATAAGGTGAGGCAGG 60.433 52.174 0.00 0.00 0.00 4.85
4806 5051 3.454082 AGGAAGAAGATAAGGTGAGGCAG 59.546 47.826 0.00 0.00 0.00 4.85
4807 5052 3.452627 GAGGAAGAAGATAAGGTGAGGCA 59.547 47.826 0.00 0.00 0.00 4.75
4808 5053 3.181459 GGAGGAAGAAGATAAGGTGAGGC 60.181 52.174 0.00 0.00 0.00 4.70
4809 5054 4.294347 AGGAGGAAGAAGATAAGGTGAGG 58.706 47.826 0.00 0.00 0.00 3.86
4810 5055 4.343814 GGAGGAGGAAGAAGATAAGGTGAG 59.656 50.000 0.00 0.00 0.00 3.51
4811 5056 4.016105 AGGAGGAGGAAGAAGATAAGGTGA 60.016 45.833 0.00 0.00 0.00 4.02
4812 5057 4.100808 CAGGAGGAGGAAGAAGATAAGGTG 59.899 50.000 0.00 0.00 0.00 4.00
4813 5058 4.016105 TCAGGAGGAGGAAGAAGATAAGGT 60.016 45.833 0.00 0.00 0.00 3.50
4814 5059 4.551671 TCAGGAGGAGGAAGAAGATAAGG 58.448 47.826 0.00 0.00 0.00 2.69
4815 5060 5.245977 GGATCAGGAGGAGGAAGAAGATAAG 59.754 48.000 0.00 0.00 0.00 1.73
4816 5061 5.151454 GGATCAGGAGGAGGAAGAAGATAA 58.849 45.833 0.00 0.00 0.00 1.75
4817 5062 4.449968 GGGATCAGGAGGAGGAAGAAGATA 60.450 50.000 0.00 0.00 0.00 1.98
4818 5063 3.586429 GGATCAGGAGGAGGAAGAAGAT 58.414 50.000 0.00 0.00 0.00 2.40
4819 5064 2.359781 GGGATCAGGAGGAGGAAGAAGA 60.360 54.545 0.00 0.00 0.00 2.87
4820 5065 2.046292 GGGATCAGGAGGAGGAAGAAG 58.954 57.143 0.00 0.00 0.00 2.85
4821 5066 1.344496 GGGGATCAGGAGGAGGAAGAA 60.344 57.143 0.00 0.00 0.00 2.52
4822 5067 0.266152 GGGGATCAGGAGGAGGAAGA 59.734 60.000 0.00 0.00 0.00 2.87
4823 5068 0.267356 AGGGGATCAGGAGGAGGAAG 59.733 60.000 0.00 0.00 0.00 3.46
4824 5069 0.725133 AAGGGGATCAGGAGGAGGAA 59.275 55.000 0.00 0.00 0.00 3.36
4825 5070 0.266152 GAAGGGGATCAGGAGGAGGA 59.734 60.000 0.00 0.00 0.00 3.71
4826 5071 0.267356 AGAAGGGGATCAGGAGGAGG 59.733 60.000 0.00 0.00 0.00 4.30
4827 5072 1.220236 AGAGAAGGGGATCAGGAGGAG 59.780 57.143 0.00 0.00 0.00 3.69
4828 5073 1.324014 AGAGAAGGGGATCAGGAGGA 58.676 55.000 0.00 0.00 0.00 3.71
4829 5074 2.188818 AAGAGAAGGGGATCAGGAGG 57.811 55.000 0.00 0.00 0.00 4.30
4830 5075 3.383223 AGAAAGAGAAGGGGATCAGGAG 58.617 50.000 0.00 0.00 0.00 3.69
4831 5076 3.013417 AGAGAAAGAGAAGGGGATCAGGA 59.987 47.826 0.00 0.00 0.00 3.86
4832 5077 3.383223 AGAGAAAGAGAAGGGGATCAGG 58.617 50.000 0.00 0.00 0.00 3.86
4833 5078 4.289245 AGAGAGAAAGAGAAGGGGATCAG 58.711 47.826 0.00 0.00 0.00 2.90
4834 5079 4.016666 AGAGAGAGAAAGAGAAGGGGATCA 60.017 45.833 0.00 0.00 0.00 2.92
4835 5080 4.546674 AGAGAGAGAAAGAGAAGGGGATC 58.453 47.826 0.00 0.00 0.00 3.36
4836 5081 4.625225 AGAGAGAGAAAGAGAAGGGGAT 57.375 45.455 0.00 0.00 0.00 3.85
4837 5082 5.194740 TGATAGAGAGAGAAAGAGAAGGGGA 59.805 44.000 0.00 0.00 0.00 4.81
4838 5083 5.301805 GTGATAGAGAGAGAAAGAGAAGGGG 59.698 48.000 0.00 0.00 0.00 4.79
4839 5084 5.890985 TGTGATAGAGAGAGAAAGAGAAGGG 59.109 44.000 0.00 0.00 0.00 3.95
4840 5085 6.460123 GCTGTGATAGAGAGAGAAAGAGAAGG 60.460 46.154 0.00 0.00 0.00 3.46
4841 5086 6.460123 GGCTGTGATAGAGAGAGAAAGAGAAG 60.460 46.154 0.00 0.00 0.00 2.85
4842 5087 5.359576 GGCTGTGATAGAGAGAGAAAGAGAA 59.640 44.000 0.00 0.00 0.00 2.87
4843 5088 4.887071 GGCTGTGATAGAGAGAGAAAGAGA 59.113 45.833 0.00 0.00 0.00 3.10
4844 5089 4.261155 CGGCTGTGATAGAGAGAGAAAGAG 60.261 50.000 0.00 0.00 0.00 2.85
4845 5090 3.629855 CGGCTGTGATAGAGAGAGAAAGA 59.370 47.826 0.00 0.00 0.00 2.52
4846 5091 3.795150 GCGGCTGTGATAGAGAGAGAAAG 60.795 52.174 0.00 0.00 0.00 2.62
4847 5092 2.099921 GCGGCTGTGATAGAGAGAGAAA 59.900 50.000 0.00 0.00 0.00 2.52
4848 5093 1.678627 GCGGCTGTGATAGAGAGAGAA 59.321 52.381 0.00 0.00 0.00 2.87
4849 5094 1.313772 GCGGCTGTGATAGAGAGAGA 58.686 55.000 0.00 0.00 0.00 3.10
4850 5095 1.001487 CTGCGGCTGTGATAGAGAGAG 60.001 57.143 0.00 0.00 0.00 3.20
4851 5096 1.028130 CTGCGGCTGTGATAGAGAGA 58.972 55.000 0.00 0.00 0.00 3.10
4852 5097 0.597118 GCTGCGGCTGTGATAGAGAG 60.597 60.000 11.21 0.00 35.22 3.20
4853 5098 1.439228 GCTGCGGCTGTGATAGAGA 59.561 57.895 11.21 0.00 35.22 3.10
4854 5099 1.593750 GGCTGCGGCTGTGATAGAG 60.594 63.158 18.85 0.00 38.73 2.43
4855 5100 2.358372 TGGCTGCGGCTGTGATAGA 61.358 57.895 18.85 0.00 38.73 1.98
4856 5101 2.176273 GTGGCTGCGGCTGTGATAG 61.176 63.158 18.85 0.00 38.73 2.08
4857 5102 2.125147 GTGGCTGCGGCTGTGATA 60.125 61.111 18.85 0.00 38.73 2.15
4865 5110 4.764336 CAACATGCGTGGCTGCGG 62.764 66.667 11.36 0.00 37.81 5.69
4866 5111 4.764336 CCAACATGCGTGGCTGCG 62.764 66.667 11.36 0.00 37.81 5.18
4884 5129 3.901797 AAAGACGAAGGGCTGGCCG 62.902 63.158 15.17 5.71 36.85 6.13
4885 5130 2.034221 AAAGACGAAGGGCTGGCC 59.966 61.111 13.15 13.15 0.00 5.36
4886 5131 1.003233 AGAAAGACGAAGGGCTGGC 60.003 57.895 0.00 0.00 0.00 4.85
4887 5132 0.391793 GGAGAAAGACGAAGGGCTGG 60.392 60.000 0.00 0.00 0.00 4.85
4888 5133 0.610687 AGGAGAAAGACGAAGGGCTG 59.389 55.000 0.00 0.00 0.00 4.85
4889 5134 1.276705 GAAGGAGAAAGACGAAGGGCT 59.723 52.381 0.00 0.00 0.00 5.19
4890 5135 1.002087 TGAAGGAGAAAGACGAAGGGC 59.998 52.381 0.00 0.00 0.00 5.19
4891 5136 3.402628 TTGAAGGAGAAAGACGAAGGG 57.597 47.619 0.00 0.00 0.00 3.95
4892 5137 4.393371 GGATTTGAAGGAGAAAGACGAAGG 59.607 45.833 0.00 0.00 0.00 3.46
4893 5138 4.393371 GGGATTTGAAGGAGAAAGACGAAG 59.607 45.833 0.00 0.00 0.00 3.79
4894 5139 4.324267 GGGATTTGAAGGAGAAAGACGAA 58.676 43.478 0.00 0.00 0.00 3.85
4895 5140 3.616560 CGGGATTTGAAGGAGAAAGACGA 60.617 47.826 0.00 0.00 0.00 4.20
4896 5141 2.673368 CGGGATTTGAAGGAGAAAGACG 59.327 50.000 0.00 0.00 0.00 4.18
4897 5142 2.420372 GCGGGATTTGAAGGAGAAAGAC 59.580 50.000 0.00 0.00 0.00 3.01
4898 5143 2.618045 GGCGGGATTTGAAGGAGAAAGA 60.618 50.000 0.00 0.00 0.00 2.52
4899 5144 1.745653 GGCGGGATTTGAAGGAGAAAG 59.254 52.381 0.00 0.00 0.00 2.62
4900 5145 1.834188 GGCGGGATTTGAAGGAGAAA 58.166 50.000 0.00 0.00 0.00 2.52
4901 5146 0.392461 CGGCGGGATTTGAAGGAGAA 60.392 55.000 0.00 0.00 0.00 2.87
4902 5147 1.220749 CGGCGGGATTTGAAGGAGA 59.779 57.895 0.00 0.00 0.00 3.71
4903 5148 1.819632 CCGGCGGGATTTGAAGGAG 60.820 63.158 20.56 0.00 34.06 3.69
4904 5149 2.270850 CCGGCGGGATTTGAAGGA 59.729 61.111 20.56 0.00 34.06 3.36
4905 5150 3.518068 GCCGGCGGGATTTGAAGG 61.518 66.667 29.48 0.00 34.06 3.46
4906 5151 3.876198 CGCCGGCGGGATTTGAAG 61.876 66.667 40.50 8.79 34.06 3.02
4919 5164 4.577246 GACTGGAGCTAGCCGCCG 62.577 72.222 12.13 11.80 40.39 6.46
4920 5165 4.228567 GGACTGGAGCTAGCCGCC 62.229 72.222 12.13 14.13 40.39 6.13
4921 5166 4.228567 GGGACTGGAGCTAGCCGC 62.229 72.222 12.13 3.60 39.57 6.53
4922 5167 3.905678 CGGGACTGGAGCTAGCCG 61.906 72.222 12.13 0.73 0.00 5.52
4923 5168 4.228567 GCGGGACTGGAGCTAGCC 62.229 72.222 12.13 2.59 0.00 3.93
4924 5169 4.577246 CGCGGGACTGGAGCTAGC 62.577 72.222 6.62 6.62 0.00 3.42
4925 5170 4.577246 GCGCGGGACTGGAGCTAG 62.577 72.222 8.83 0.00 0.00 3.42
4929 5174 3.781770 GATCTGCGCGGGACTGGAG 62.782 68.421 17.88 0.00 0.00 3.86
4930 5175 3.838271 GATCTGCGCGGGACTGGA 61.838 66.667 17.88 0.00 0.00 3.86
4931 5176 4.899239 GGATCTGCGCGGGACTGG 62.899 72.222 17.88 0.00 0.00 4.00
4932 5177 4.899239 GGGATCTGCGCGGGACTG 62.899 72.222 17.88 0.00 0.00 3.51
4933 5178 3.733507 TAGGGATCTGCGCGGGACT 62.734 63.158 17.88 11.71 34.07 3.85
4934 5179 2.493907 GATAGGGATCTGCGCGGGAC 62.494 65.000 17.88 10.57 34.07 4.46
4935 5180 2.203640 ATAGGGATCTGCGCGGGA 60.204 61.111 17.88 11.07 34.07 5.14
4936 5181 2.219325 GAGATAGGGATCTGCGCGGG 62.219 65.000 17.88 4.96 42.80 6.13
4937 5182 1.214062 GAGATAGGGATCTGCGCGG 59.786 63.158 10.86 10.86 42.80 6.46
4938 5183 1.214062 GGAGATAGGGATCTGCGCG 59.786 63.158 0.00 0.00 42.80 6.86
4942 5187 3.577848 CTGAGGTTGGAGATAGGGATCTG 59.422 52.174 0.00 0.00 42.80 2.90
4943 5188 3.855668 CTGAGGTTGGAGATAGGGATCT 58.144 50.000 0.00 0.00 45.59 2.75
4944 5189 2.301583 GCTGAGGTTGGAGATAGGGATC 59.698 54.545 0.00 0.00 0.00 3.36
4945 5190 2.334023 GCTGAGGTTGGAGATAGGGAT 58.666 52.381 0.00 0.00 0.00 3.85
4946 5191 1.692762 GGCTGAGGTTGGAGATAGGGA 60.693 57.143 0.00 0.00 0.00 4.20
4947 5192 0.761802 GGCTGAGGTTGGAGATAGGG 59.238 60.000 0.00 0.00 0.00 3.53
4948 5193 0.761802 GGGCTGAGGTTGGAGATAGG 59.238 60.000 0.00 0.00 0.00 2.57
4949 5194 1.500474 TGGGCTGAGGTTGGAGATAG 58.500 55.000 0.00 0.00 0.00 2.08
4950 5195 2.196742 ATGGGCTGAGGTTGGAGATA 57.803 50.000 0.00 0.00 0.00 1.98
4951 5196 1.213926 GAATGGGCTGAGGTTGGAGAT 59.786 52.381 0.00 0.00 0.00 2.75
4952 5197 0.620556 GAATGGGCTGAGGTTGGAGA 59.379 55.000 0.00 0.00 0.00 3.71
4953 5198 0.394899 GGAATGGGCTGAGGTTGGAG 60.395 60.000 0.00 0.00 0.00 3.86
4954 5199 1.139498 TGGAATGGGCTGAGGTTGGA 61.139 55.000 0.00 0.00 0.00 3.53
4955 5200 0.251742 TTGGAATGGGCTGAGGTTGG 60.252 55.000 0.00 0.00 0.00 3.77
4956 5201 0.890683 GTTGGAATGGGCTGAGGTTG 59.109 55.000 0.00 0.00 0.00 3.77
4957 5202 0.251787 GGTTGGAATGGGCTGAGGTT 60.252 55.000 0.00 0.00 0.00 3.50
4958 5203 1.384191 GGTTGGAATGGGCTGAGGT 59.616 57.895 0.00 0.00 0.00 3.85
4959 5204 1.380380 GGGTTGGAATGGGCTGAGG 60.380 63.158 0.00 0.00 0.00 3.86
4960 5205 1.380380 GGGGTTGGAATGGGCTGAG 60.380 63.158 0.00 0.00 0.00 3.35
4961 5206 2.770130 GGGGTTGGAATGGGCTGA 59.230 61.111 0.00 0.00 0.00 4.26
4962 5207 2.364186 GGGGGTTGGAATGGGCTG 60.364 66.667 0.00 0.00 0.00 4.85
4963 5208 1.750087 AAAGGGGGTTGGAATGGGCT 61.750 55.000 0.00 0.00 0.00 5.19
4964 5209 1.229496 AAAGGGGGTTGGAATGGGC 60.229 57.895 0.00 0.00 0.00 5.36
4965 5210 1.552799 GCAAAGGGGGTTGGAATGGG 61.553 60.000 0.00 0.00 0.00 4.00
4966 5211 0.545071 AGCAAAGGGGGTTGGAATGG 60.545 55.000 0.00 0.00 0.00 3.16
4967 5212 0.609662 CAGCAAAGGGGGTTGGAATG 59.390 55.000 0.00 0.00 0.00 2.67
4968 5213 1.194121 GCAGCAAAGGGGGTTGGAAT 61.194 55.000 0.00 0.00 0.00 3.01
4969 5214 1.836604 GCAGCAAAGGGGGTTGGAA 60.837 57.895 0.00 0.00 0.00 3.53
4970 5215 2.203625 GCAGCAAAGGGGGTTGGA 60.204 61.111 0.00 0.00 0.00 3.53
4971 5216 3.313524 GGCAGCAAAGGGGGTTGG 61.314 66.667 0.00 0.00 0.00 3.77
4972 5217 3.313524 GGGCAGCAAAGGGGGTTG 61.314 66.667 0.00 0.00 0.00 3.77
4973 5218 4.638895 GGGGCAGCAAAGGGGGTT 62.639 66.667 0.00 0.00 0.00 4.11
4987 5232 2.356667 GGAACCTTCAGCCAGGGG 59.643 66.667 0.00 0.00 38.42 4.79
4988 5233 2.045926 CGGAACCTTCAGCCAGGG 60.046 66.667 0.00 0.00 38.42 4.45
4989 5234 2.747855 GCGGAACCTTCAGCCAGG 60.748 66.667 0.00 0.00 41.57 4.45
5006 5251 3.382832 AACTCTGTCTCGCCGGGG 61.383 66.667 13.31 13.31 0.00 5.73
5007 5252 2.125912 CAACTCTGTCTCGCCGGG 60.126 66.667 2.18 0.00 0.00 5.73
5008 5253 2.125912 CCAACTCTGTCTCGCCGG 60.126 66.667 0.00 0.00 0.00 6.13
5009 5254 0.108615 ATTCCAACTCTGTCTCGCCG 60.109 55.000 0.00 0.00 0.00 6.46
5010 5255 2.003301 GAATTCCAACTCTGTCTCGCC 58.997 52.381 0.00 0.00 0.00 5.54
5011 5256 1.656095 CGAATTCCAACTCTGTCTCGC 59.344 52.381 0.00 0.00 0.00 5.03
5012 5257 1.656095 GCGAATTCCAACTCTGTCTCG 59.344 52.381 0.00 0.00 0.00 4.04
5013 5258 2.003301 GGCGAATTCCAACTCTGTCTC 58.997 52.381 0.00 0.00 0.00 3.36
5014 5259 1.347707 TGGCGAATTCCAACTCTGTCT 59.652 47.619 0.00 0.00 32.18 3.41
5015 5260 1.808411 TGGCGAATTCCAACTCTGTC 58.192 50.000 0.00 0.00 32.18 3.51
5016 5261 2.086869 CATGGCGAATTCCAACTCTGT 58.913 47.619 0.00 0.00 39.96 3.41
5017 5262 1.402968 CCATGGCGAATTCCAACTCTG 59.597 52.381 0.00 0.00 39.96 3.35
5018 5263 1.281867 TCCATGGCGAATTCCAACTCT 59.718 47.619 6.96 0.00 39.96 3.24
5019 5264 1.750193 TCCATGGCGAATTCCAACTC 58.250 50.000 6.96 0.00 39.96 3.01
5020 5265 2.442236 ATCCATGGCGAATTCCAACT 57.558 45.000 6.96 0.00 39.96 3.16
5021 5266 2.032030 CGTATCCATGGCGAATTCCAAC 60.032 50.000 6.96 0.00 39.96 3.77
5022 5267 2.217750 CGTATCCATGGCGAATTCCAA 58.782 47.619 6.96 0.00 39.96 3.53
5023 5268 1.877637 CGTATCCATGGCGAATTCCA 58.122 50.000 6.96 0.00 40.97 3.53
5024 5269 0.517316 GCGTATCCATGGCGAATTCC 59.483 55.000 13.61 0.00 0.00 3.01
5025 5270 0.517316 GGCGTATCCATGGCGAATTC 59.483 55.000 13.61 0.00 34.01 2.17
5026 5271 2.629002 GGCGTATCCATGGCGAATT 58.371 52.632 13.61 0.00 34.01 2.17
5027 5272 4.379174 GGCGTATCCATGGCGAAT 57.621 55.556 13.61 2.21 34.01 3.34
5031 5276 2.665185 GGACGGCGTATCCATGGC 60.665 66.667 14.74 0.00 36.15 4.40
5032 5277 2.355837 CGGACGGCGTATCCATGG 60.356 66.667 14.74 4.97 35.83 3.66
5033 5278 3.036084 GCGGACGGCGTATCCATG 61.036 66.667 14.74 0.00 35.83 3.66
5049 5294 1.958205 ACTGTGAGCAGCAGTTCGC 60.958 57.895 0.00 0.00 43.87 4.70
5050 5295 4.350620 ACTGTGAGCAGCAGTTCG 57.649 55.556 0.00 0.00 43.87 3.95
5054 5299 0.873054 CAAGGAACTGTGAGCAGCAG 59.127 55.000 0.00 0.00 46.30 4.24
5055 5300 0.181114 ACAAGGAACTGTGAGCAGCA 59.819 50.000 0.00 0.00 46.30 4.41
5056 5301 0.590195 CACAAGGAACTGTGAGCAGC 59.410 55.000 0.00 0.00 46.30 5.25
5058 5303 0.181114 AGCACAAGGAACTGTGAGCA 59.819 50.000 7.88 0.00 40.86 4.26
5059 5304 0.590195 CAGCACAAGGAACTGTGAGC 59.410 55.000 7.88 0.00 40.86 4.26
5060 5305 1.202687 TCCAGCACAAGGAACTGTGAG 60.203 52.381 7.88 0.00 40.86 3.51
5061 5306 0.836606 TCCAGCACAAGGAACTGTGA 59.163 50.000 7.88 0.00 40.86 3.58
5062 5307 1.679139 TTCCAGCACAAGGAACTGTG 58.321 50.000 0.00 0.00 40.11 3.66
5067 5312 0.534203 GACGGTTCCAGCACAAGGAA 60.534 55.000 0.00 0.00 42.62 3.36
5068 5313 1.070786 GACGGTTCCAGCACAAGGA 59.929 57.895 0.00 0.00 0.00 3.36
5069 5314 1.966451 GGACGGTTCCAGCACAAGG 60.966 63.158 0.00 0.00 42.30 3.61
5070 5315 2.317609 CGGACGGTTCCAGCACAAG 61.318 63.158 0.00 0.00 43.00 3.16
5071 5316 2.280524 CGGACGGTTCCAGCACAA 60.281 61.111 0.00 0.00 43.00 3.33
5072 5317 4.980805 GCGGACGGTTCCAGCACA 62.981 66.667 0.00 0.00 43.00 4.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.