Multiple sequence alignment - TraesCS3B01G191600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G191600 chr3B 100.000 7009 0 0 1 7009 204302571 204295563 0.000000e+00 12944.0
1 TraesCS3B01G191600 chr3B 87.302 189 20 4 86 272 143254625 143254811 5.510000e-51 213.0
2 TraesCS3B01G191600 chr3A 91.789 3483 150 59 353 3760 161466488 161463067 0.000000e+00 4723.0
3 TraesCS3B01G191600 chr3A 89.577 1583 86 33 4167 5704 161462453 161460905 0.000000e+00 1936.0
4 TraesCS3B01G191600 chr3A 88.966 1006 38 25 5835 6833 161460797 161459858 0.000000e+00 1175.0
5 TraesCS3B01G191600 chr3A 88.670 406 25 5 3767 4171 161462996 161462611 6.360000e-130 475.0
6 TraesCS3B01G191600 chr3A 97.959 98 1 1 6845 6941 11779789 11779692 1.210000e-37 169.0
7 TraesCS3B01G191600 chr3A 94.231 104 5 1 6839 6941 544196784 544196887 2.620000e-34 158.0
8 TraesCS3B01G191600 chr3A 89.655 87 6 2 4520 4603 672073736 672073822 2.670000e-19 108.0
9 TraesCS3B01G191600 chr3A 89.041 73 8 0 6 78 746378443 746378515 2.690000e-14 91.6
10 TraesCS3B01G191600 chr3A 97.561 41 1 0 277 317 161466780 161466740 3.510000e-08 71.3
11 TraesCS3B01G191600 chr3D 93.443 2730 105 27 274 2966 142497058 142494366 0.000000e+00 3982.0
12 TraesCS3B01G191600 chr3D 92.626 1329 62 14 2978 4286 142494267 142492955 0.000000e+00 1879.0
13 TraesCS3B01G191600 chr3D 93.182 1276 63 9 4394 5653 142492954 142491687 0.000000e+00 1853.0
14 TraesCS3B01G191600 chr3D 88.496 1104 56 29 5761 6828 142491410 142490342 0.000000e+00 1269.0
15 TraesCS3B01G191600 chr7A 88.947 190 15 5 86 272 324375 324561 5.470000e-56 230.0
16 TraesCS3B01G191600 chr7A 96.939 98 2 1 6845 6941 706262846 706262749 5.630000e-36 163.0
17 TraesCS3B01G191600 chr7B 89.189 185 17 2 88 272 739478627 739478808 1.970000e-55 228.0
18 TraesCS3B01G191600 chr4D 88.830 188 18 3 86 270 16537028 16536841 1.970000e-55 228.0
19 TraesCS3B01G191600 chr4D 87.912 91 8 2 4520 4607 98888322 98888412 3.460000e-18 104.0
20 TraesCS3B01G191600 chr4D 79.630 108 17 4 4262 4368 339081598 339081701 9.750000e-09 73.1
21 TraesCS3B01G191600 chr5D 90.173 173 15 1 100 272 281669016 281669186 2.540000e-54 224.0
22 TraesCS3B01G191600 chr5D 89.412 85 9 0 4437 4521 188826535 188826619 2.670000e-19 108.0
23 TraesCS3B01G191600 chr1B 87.368 190 19 5 86 272 641260600 641260787 5.510000e-51 213.0
24 TraesCS3B01G191600 chr1B 96.907 97 3 0 6845 6941 296757867 296757771 5.630000e-36 163.0
25 TraesCS3B01G191600 chr6A 88.636 176 16 2 100 273 572128212 572128039 1.980000e-50 211.0
26 TraesCS3B01G191600 chr1D 86.842 190 21 3 86 272 290450975 290451163 7.120000e-50 209.0
27 TraesCS3B01G191600 chr1D 95.960 99 3 1 6845 6942 314121100 314121198 7.280000e-35 159.0
28 TraesCS3B01G191600 chr4B 85.787 197 22 5 90 283 667567885 667568078 3.310000e-48 204.0
29 TraesCS3B01G191600 chr4B 88.889 90 10 0 4435 4524 182632512 182632601 2.070000e-20 111.0
30 TraesCS3B01G191600 chr4B 88.889 90 10 0 4434 4523 538900658 538900747 2.070000e-20 111.0
31 TraesCS3B01G191600 chr4B 87.912 91 8 2 4520 4607 140706850 140706940 3.460000e-18 104.0
32 TraesCS3B01G191600 chr4B 87.778 90 10 1 4432 4521 570144639 570144727 3.460000e-18 104.0
33 TraesCS3B01G191600 chr1A 97.917 96 1 1 6845 6939 373761023 373760928 1.560000e-36 165.0
34 TraesCS3B01G191600 chr2A 96.939 98 2 1 6845 6941 671341821 671341918 5.630000e-36 163.0
35 TraesCS3B01G191600 chr2A 91.860 86 7 0 4437 4522 203318507 203318592 3.430000e-23 121.0
36 TraesCS3B01G191600 chr6B 95.918 98 3 1 6845 6941 412282831 412282928 2.620000e-34 158.0
37 TraesCS3B01G191600 chr6B 95.050 101 4 1 6842 6941 708042009 708042109 2.620000e-34 158.0
38 TraesCS3B01G191600 chr6B 93.333 45 3 0 1 45 91243154 91243198 4.540000e-07 67.6
39 TraesCS3B01G191600 chr5A 91.860 86 7 0 4436 4521 549199813 549199728 3.430000e-23 121.0
40 TraesCS3B01G191600 chr5A 91.139 79 7 0 1 79 649456585 649456663 2.670000e-19 108.0
41 TraesCS3B01G191600 chr7D 88.372 86 10 0 4437 4522 404156088 404156003 3.460000e-18 104.0
42 TraesCS3B01G191600 chr6D 90.667 75 6 1 3 77 387888450 387888523 1.610000e-16 99.0
43 TraesCS3B01G191600 chr2D 89.024 82 5 3 4529 4606 155481164 155481245 1.610000e-16 99.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G191600 chr3B 204295563 204302571 7008 True 12944.00 12944 100.00000 1 7009 1 chr3B.!!$R1 7008
1 TraesCS3B01G191600 chr3A 161459858 161466780 6922 True 1676.06 4723 91.31260 277 6833 5 chr3A.!!$R2 6556
2 TraesCS3B01G191600 chr3D 142490342 142497058 6716 True 2245.75 3982 91.93675 274 6828 4 chr3D.!!$R1 6554

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
899 1121 0.938637 GAGATCGCTGCCATCGTCAG 60.939 60.000 1.6 0.0 34.79 3.51 F
1435 1675 0.179176 GCAGCACAACGACAACAACA 60.179 50.000 0.0 0.0 0.00 3.33 F
2896 3180 0.031585 ACACGAGCATGTACACACGT 59.968 50.000 0.0 5.2 34.40 4.49 F
3524 3929 0.395311 TACTACTCCCACTCCCTGCG 60.395 60.000 0.0 0.0 0.00 5.18 F
3559 3964 1.079336 GGACGCCCGTTTTCTAGCT 60.079 57.895 0.0 0.0 0.00 3.32 F
5234 5883 0.175760 TGCTACATTGCTCCGTCTCC 59.824 55.000 0.0 0.0 0.00 3.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2893 3177 0.901827 TGGATGGAGTGCATGTACGT 59.098 50.000 0.12 0.0 0.00 3.57 R
3112 3483 1.410882 TGCATATGCCGTACTGCTACA 59.589 47.619 24.54 0.0 41.18 2.74 R
4671 5309 0.109342 AACAAGCCACACTCCCTCAG 59.891 55.000 0.00 0.0 0.00 3.35 R
5215 5861 0.175760 GGAGACGGAGCAATGTAGCA 59.824 55.000 0.00 0.0 36.85 3.49 R
5332 5983 0.392193 CATTTCCTCGCAGCCTGAGT 60.392 55.000 0.00 0.0 0.00 3.41 R
6217 7087 0.038526 GACACACCCAGGACAGTACG 60.039 60.000 0.00 0.0 0.00 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 7.736031 CATTGATGAATGTTCTAACTGCTTG 57.264 36.000 0.00 0.00 35.19 4.01
30 31 5.300969 TGATGAATGTTCTAACTGCTTGC 57.699 39.130 0.00 0.00 0.00 4.01
31 32 4.761227 TGATGAATGTTCTAACTGCTTGCA 59.239 37.500 0.00 0.00 0.00 4.08
32 33 5.241285 TGATGAATGTTCTAACTGCTTGCAA 59.759 36.000 0.00 0.00 0.00 4.08
33 34 5.512753 TGAATGTTCTAACTGCTTGCAAA 57.487 34.783 0.00 0.00 0.00 3.68
34 35 5.900425 TGAATGTTCTAACTGCTTGCAAAA 58.100 33.333 0.00 0.00 0.00 2.44
35 36 6.514947 TGAATGTTCTAACTGCTTGCAAAAT 58.485 32.000 0.00 0.00 0.00 1.82
36 37 6.985645 TGAATGTTCTAACTGCTTGCAAAATT 59.014 30.769 0.00 0.00 0.00 1.82
37 38 7.495279 TGAATGTTCTAACTGCTTGCAAAATTT 59.505 29.630 0.00 0.00 0.00 1.82
38 39 6.826893 TGTTCTAACTGCTTGCAAAATTTC 57.173 33.333 0.00 0.00 0.00 2.17
39 40 6.336566 TGTTCTAACTGCTTGCAAAATTTCA 58.663 32.000 0.00 0.00 0.00 2.69
40 41 6.476380 TGTTCTAACTGCTTGCAAAATTTCAG 59.524 34.615 0.00 5.78 0.00 3.02
41 42 5.531634 TCTAACTGCTTGCAAAATTTCAGG 58.468 37.500 0.00 0.00 0.00 3.86
42 43 3.825143 ACTGCTTGCAAAATTTCAGGT 57.175 38.095 0.00 0.00 0.00 4.00
43 44 4.141233 ACTGCTTGCAAAATTTCAGGTT 57.859 36.364 0.00 0.00 0.00 3.50
44 45 3.872771 ACTGCTTGCAAAATTTCAGGTTG 59.127 39.130 0.00 0.00 0.00 3.77
45 46 4.121317 CTGCTTGCAAAATTTCAGGTTGA 58.879 39.130 0.00 0.00 0.00 3.18
46 47 4.511527 TGCTTGCAAAATTTCAGGTTGAA 58.488 34.783 0.00 0.00 34.03 2.69
57 58 5.867903 TTTCAGGTTGAAATGACATTGGT 57.132 34.783 0.34 0.00 41.02 3.67
58 59 4.852134 TCAGGTTGAAATGACATTGGTG 57.148 40.909 0.34 0.00 0.00 4.17
59 60 3.573538 TCAGGTTGAAATGACATTGGTGG 59.426 43.478 0.34 0.00 0.00 4.61
60 61 3.573538 CAGGTTGAAATGACATTGGTGGA 59.426 43.478 0.34 0.00 0.00 4.02
61 62 3.828451 AGGTTGAAATGACATTGGTGGAG 59.172 43.478 0.34 0.00 0.00 3.86
62 63 3.056607 GGTTGAAATGACATTGGTGGAGG 60.057 47.826 0.34 0.00 0.00 4.30
63 64 3.524095 TGAAATGACATTGGTGGAGGT 57.476 42.857 0.34 0.00 0.00 3.85
64 65 3.843422 TGAAATGACATTGGTGGAGGTT 58.157 40.909 0.34 0.00 0.00 3.50
65 66 4.222336 TGAAATGACATTGGTGGAGGTTT 58.778 39.130 0.34 0.00 0.00 3.27
66 67 4.039004 TGAAATGACATTGGTGGAGGTTTG 59.961 41.667 0.34 0.00 0.00 2.93
67 68 1.993956 TGACATTGGTGGAGGTTTGG 58.006 50.000 0.00 0.00 0.00 3.28
68 69 1.496857 TGACATTGGTGGAGGTTTGGA 59.503 47.619 0.00 0.00 0.00 3.53
69 70 1.886542 GACATTGGTGGAGGTTTGGAC 59.113 52.381 0.00 0.00 0.00 4.02
70 71 1.216678 ACATTGGTGGAGGTTTGGACA 59.783 47.619 0.00 0.00 0.00 4.02
71 72 2.315176 CATTGGTGGAGGTTTGGACAA 58.685 47.619 0.00 0.00 0.00 3.18
72 73 2.534042 TTGGTGGAGGTTTGGACAAA 57.466 45.000 0.00 0.00 0.00 2.83
73 74 2.534042 TGGTGGAGGTTTGGACAAAA 57.466 45.000 0.00 0.00 31.33 2.44
74 75 2.821437 TGGTGGAGGTTTGGACAAAAA 58.179 42.857 0.00 0.00 31.33 1.94
97 98 7.784633 AAAAACGATGGTCATTGATTTTGTT 57.215 28.000 14.36 0.00 36.47 2.83
98 99 8.879342 AAAAACGATGGTCATTGATTTTGTTA 57.121 26.923 14.36 0.00 36.47 2.41
99 100 9.487790 AAAAACGATGGTCATTGATTTTGTTAT 57.512 25.926 14.36 0.00 36.47 1.89
100 101 9.487790 AAAACGATGGTCATTGATTTTGTTATT 57.512 25.926 5.29 0.00 0.00 1.40
101 102 9.487790 AAACGATGGTCATTGATTTTGTTATTT 57.512 25.926 5.29 0.00 0.00 1.40
102 103 9.487790 AACGATGGTCATTGATTTTGTTATTTT 57.512 25.926 5.29 0.00 0.00 1.82
103 104 9.487790 ACGATGGTCATTGATTTTGTTATTTTT 57.512 25.926 5.29 0.00 0.00 1.94
104 105 9.743937 CGATGGTCATTGATTTTGTTATTTTTG 57.256 29.630 0.00 0.00 0.00 2.44
105 106 9.545611 GATGGTCATTGATTTTGTTATTTTTGC 57.454 29.630 0.00 0.00 0.00 3.68
106 107 7.869800 TGGTCATTGATTTTGTTATTTTTGCC 58.130 30.769 0.00 0.00 0.00 4.52
107 108 7.040823 TGGTCATTGATTTTGTTATTTTTGCCC 60.041 33.333 0.00 0.00 0.00 5.36
108 109 7.040823 GGTCATTGATTTTGTTATTTTTGCCCA 60.041 33.333 0.00 0.00 0.00 5.36
109 110 8.348507 GTCATTGATTTTGTTATTTTTGCCCAA 58.651 29.630 0.00 0.00 0.00 4.12
110 111 8.906867 TCATTGATTTTGTTATTTTTGCCCAAA 58.093 25.926 0.00 0.00 0.00 3.28
111 112 8.966194 CATTGATTTTGTTATTTTTGCCCAAAC 58.034 29.630 0.00 0.00 0.00 2.93
112 113 7.032377 TGATTTTGTTATTTTTGCCCAAACC 57.968 32.000 0.00 0.00 0.00 3.27
113 114 6.830838 TGATTTTGTTATTTTTGCCCAAACCT 59.169 30.769 0.00 0.00 0.00 3.50
114 115 6.685527 TTTTGTTATTTTTGCCCAAACCTC 57.314 33.333 0.00 0.00 0.00 3.85
115 116 4.344359 TGTTATTTTTGCCCAAACCTCC 57.656 40.909 0.00 0.00 0.00 4.30
116 117 3.711704 TGTTATTTTTGCCCAAACCTCCA 59.288 39.130 0.00 0.00 0.00 3.86
117 118 2.928801 ATTTTTGCCCAAACCTCCAC 57.071 45.000 0.00 0.00 0.00 4.02
118 119 1.872773 TTTTTGCCCAAACCTCCACT 58.127 45.000 0.00 0.00 0.00 4.00
119 120 2.757894 TTTTGCCCAAACCTCCACTA 57.242 45.000 0.00 0.00 0.00 2.74
120 121 2.757894 TTTGCCCAAACCTCCACTAA 57.242 45.000 0.00 0.00 0.00 2.24
121 122 2.990740 TTGCCCAAACCTCCACTAAT 57.009 45.000 0.00 0.00 0.00 1.73
122 123 2.214376 TGCCCAAACCTCCACTAATG 57.786 50.000 0.00 0.00 0.00 1.90
123 124 1.427368 TGCCCAAACCTCCACTAATGT 59.573 47.619 0.00 0.00 0.00 2.71
124 125 2.092323 GCCCAAACCTCCACTAATGTC 58.908 52.381 0.00 0.00 0.00 3.06
125 126 2.554344 GCCCAAACCTCCACTAATGTCA 60.554 50.000 0.00 0.00 0.00 3.58
126 127 3.877735 GCCCAAACCTCCACTAATGTCAT 60.878 47.826 0.00 0.00 0.00 3.06
127 128 4.344104 CCCAAACCTCCACTAATGTCATT 58.656 43.478 3.06 3.06 0.00 2.57
128 129 4.772100 CCCAAACCTCCACTAATGTCATTT 59.228 41.667 2.79 0.00 0.00 2.32
129 130 5.105756 CCCAAACCTCCACTAATGTCATTTC 60.106 44.000 2.79 0.00 0.00 2.17
130 131 5.391950 CCAAACCTCCACTAATGTCATTTCG 60.392 44.000 2.79 0.00 0.00 3.46
131 132 4.819105 ACCTCCACTAATGTCATTTCGA 57.181 40.909 2.79 0.00 0.00 3.71
132 133 4.504858 ACCTCCACTAATGTCATTTCGAC 58.495 43.478 2.79 0.00 45.61 4.20
147 148 4.945292 TTTCGACATGAAATTTTGCACG 57.055 36.364 0.00 0.00 41.59 5.34
148 149 2.315011 TCGACATGAAATTTTGCACGC 58.685 42.857 0.00 0.00 0.00 5.34
149 150 2.049959 CGACATGAAATTTTGCACGCA 58.950 42.857 0.00 0.00 0.00 5.24
150 151 2.089427 CGACATGAAATTTTGCACGCAG 59.911 45.455 0.00 0.00 0.00 5.18
151 152 7.934958 TTCGACATGAAATTTTGCACGCAGT 62.935 40.000 0.00 0.00 35.03 4.40
152 153 3.456280 ACATGAAATTTTGCACGCAGTT 58.544 36.364 0.00 0.00 41.61 3.16
153 154 4.615949 ACATGAAATTTTGCACGCAGTTA 58.384 34.783 0.00 0.00 41.61 2.24
154 155 4.681025 ACATGAAATTTTGCACGCAGTTAG 59.319 37.500 0.00 0.00 41.61 2.34
155 156 4.560136 TGAAATTTTGCACGCAGTTAGA 57.440 36.364 0.00 0.00 41.61 2.10
156 157 4.926244 TGAAATTTTGCACGCAGTTAGAA 58.074 34.783 0.00 0.00 41.61 2.10
157 158 5.344066 TGAAATTTTGCACGCAGTTAGAAA 58.656 33.333 0.00 0.00 41.61 2.52
158 159 5.807520 TGAAATTTTGCACGCAGTTAGAAAA 59.192 32.000 0.00 0.00 41.61 2.29
159 160 6.478344 TGAAATTTTGCACGCAGTTAGAAAAT 59.522 30.769 0.00 0.00 41.61 1.82
160 161 6.843069 AATTTTGCACGCAGTTAGAAAATT 57.157 29.167 0.00 0.00 41.61 1.82
161 162 6.843069 ATTTTGCACGCAGTTAGAAAATTT 57.157 29.167 0.00 0.00 41.61 1.82
162 163 7.938563 ATTTTGCACGCAGTTAGAAAATTTA 57.061 28.000 0.00 0.00 41.61 1.40
163 164 7.938563 TTTTGCACGCAGTTAGAAAATTTAT 57.061 28.000 0.00 0.00 41.61 1.40
164 165 7.561237 TTTGCACGCAGTTAGAAAATTTATC 57.439 32.000 0.00 0.00 41.61 1.75
165 166 6.247727 TGCACGCAGTTAGAAAATTTATCA 57.752 33.333 0.00 0.00 41.61 2.15
166 167 6.673106 TGCACGCAGTTAGAAAATTTATCAA 58.327 32.000 0.00 0.00 41.61 2.57
167 168 7.312154 TGCACGCAGTTAGAAAATTTATCAAT 58.688 30.769 0.00 0.00 41.61 2.57
168 169 7.273164 TGCACGCAGTTAGAAAATTTATCAATG 59.727 33.333 0.00 0.00 41.61 2.82
169 170 7.273381 GCACGCAGTTAGAAAATTTATCAATGT 59.727 33.333 0.00 0.00 41.61 2.71
170 171 9.128107 CACGCAGTTAGAAAATTTATCAATGTT 57.872 29.630 0.00 0.00 41.61 2.71
171 172 9.341899 ACGCAGTTAGAAAATTTATCAATGTTC 57.658 29.630 0.00 0.00 37.78 3.18
172 173 9.340695 CGCAGTTAGAAAATTTATCAATGTTCA 57.659 29.630 5.53 0.00 38.63 3.18
235 236 8.939201 TTTTTCAAGAATTTACTGTTCATGCA 57.061 26.923 0.00 0.00 0.00 3.96
236 237 8.578308 TTTTCAAGAATTTACTGTTCATGCAG 57.422 30.769 0.00 0.00 41.92 4.41
237 238 6.258230 TCAAGAATTTACTGTTCATGCAGG 57.742 37.500 0.00 0.00 40.59 4.85
238 239 6.003326 TCAAGAATTTACTGTTCATGCAGGA 58.997 36.000 0.00 0.00 40.59 3.86
239 240 6.149973 TCAAGAATTTACTGTTCATGCAGGAG 59.850 38.462 0.00 0.00 40.59 3.69
240 241 4.397417 AGAATTTACTGTTCATGCAGGAGC 59.603 41.667 8.37 8.37 40.59 4.70
252 253 1.506493 GCAGGAGCATATGAGTTCGG 58.494 55.000 6.97 0.00 41.58 4.30
253 254 1.875576 GCAGGAGCATATGAGTTCGGG 60.876 57.143 6.97 0.00 41.58 5.14
254 255 1.688735 CAGGAGCATATGAGTTCGGGA 59.311 52.381 6.97 0.00 0.00 5.14
255 256 2.301296 CAGGAGCATATGAGTTCGGGAT 59.699 50.000 6.97 0.00 0.00 3.85
256 257 2.564947 AGGAGCATATGAGTTCGGGATC 59.435 50.000 6.97 0.00 0.00 3.36
257 258 2.300152 GGAGCATATGAGTTCGGGATCA 59.700 50.000 6.97 0.00 0.00 2.92
258 259 3.244215 GGAGCATATGAGTTCGGGATCAA 60.244 47.826 6.97 0.00 0.00 2.57
259 260 4.380531 GAGCATATGAGTTCGGGATCAAA 58.619 43.478 6.97 0.00 0.00 2.69
260 261 4.978099 AGCATATGAGTTCGGGATCAAAT 58.022 39.130 6.97 0.00 0.00 2.32
261 262 6.114187 AGCATATGAGTTCGGGATCAAATA 57.886 37.500 6.97 0.00 0.00 1.40
262 263 5.934625 AGCATATGAGTTCGGGATCAAATAC 59.065 40.000 6.97 0.00 0.00 1.89
263 264 5.934625 GCATATGAGTTCGGGATCAAATACT 59.065 40.000 6.97 0.00 0.00 2.12
264 265 6.091441 GCATATGAGTTCGGGATCAAATACTC 59.909 42.308 6.97 2.94 34.17 2.59
265 266 4.402056 TGAGTTCGGGATCAAATACTCC 57.598 45.455 12.06 0.00 32.96 3.85
266 267 3.772572 TGAGTTCGGGATCAAATACTCCA 59.227 43.478 12.06 2.37 32.96 3.86
267 268 4.408921 TGAGTTCGGGATCAAATACTCCAT 59.591 41.667 12.06 0.00 32.96 3.41
268 269 4.708177 AGTTCGGGATCAAATACTCCATG 58.292 43.478 0.00 0.00 32.90 3.66
269 270 4.164221 AGTTCGGGATCAAATACTCCATGT 59.836 41.667 0.00 0.00 32.90 3.21
270 271 4.336889 TCGGGATCAAATACTCCATGTC 57.663 45.455 0.00 0.00 32.90 3.06
271 272 3.071023 TCGGGATCAAATACTCCATGTCC 59.929 47.826 0.00 0.00 32.90 4.02
272 273 3.756117 GGGATCAAATACTCCATGTCCC 58.244 50.000 0.00 0.00 37.49 4.46
347 548 2.053865 AAATCCGCCAGCACCATGG 61.054 57.895 11.19 11.19 43.72 3.66
493 711 5.345702 GCAGTCGGTGTATAATGTACAGAA 58.654 41.667 0.33 0.00 0.00 3.02
741 963 3.837731 CTCCCTTCTTCCTCCTATCCATC 59.162 52.174 0.00 0.00 0.00 3.51
744 966 2.310779 TCTTCCTCCTATCCATCGGG 57.689 55.000 0.00 0.00 0.00 5.14
799 1021 1.502190 CTGCTCATGCACTGCACTG 59.498 57.895 5.67 6.50 45.31 3.66
800 1022 2.178521 GCTCATGCACTGCACTGC 59.821 61.111 5.67 10.99 43.04 4.40
801 1023 2.875485 CTCATGCACTGCACTGCC 59.125 61.111 14.65 0.00 43.04 4.85
837 1059 1.992557 ACTCCAAGCCCAGGTTCATAA 59.007 47.619 0.00 0.00 0.00 1.90
899 1121 0.938637 GAGATCGCTGCCATCGTCAG 60.939 60.000 1.60 0.00 34.79 3.51
1227 1449 3.816524 CTCCTCGCCGAGTTCGCT 61.817 66.667 13.83 0.00 38.18 4.93
1304 1526 3.439540 CGAAACCCACCATGGCGG 61.440 66.667 13.04 12.60 35.79 6.13
1415 1640 3.119814 TCGTCGGAAGAGAAAGATGTGAG 60.120 47.826 0.00 0.00 43.49 3.51
1434 1674 0.865639 GGCAGCACAACGACAACAAC 60.866 55.000 0.00 0.00 0.00 3.32
1435 1675 0.179176 GCAGCACAACGACAACAACA 60.179 50.000 0.00 0.00 0.00 3.33
1436 1676 1.730772 GCAGCACAACGACAACAACAA 60.731 47.619 0.00 0.00 0.00 2.83
1499 1739 2.183555 GGACGATTCTTCCGCCGT 59.816 61.111 0.00 0.00 38.01 5.68
1596 1836 4.742201 GCGGCGACCAAGAGCTCA 62.742 66.667 17.77 0.00 0.00 4.26
1759 2007 2.798847 CGATCTGCACATCACGATTCAT 59.201 45.455 2.76 0.00 0.00 2.57
1824 2072 3.275999 TCACGATCGACAACATCTCCTA 58.724 45.455 24.34 0.00 0.00 2.94
1839 2087 1.153745 CCTACGAGTCAGCAGGCAC 60.154 63.158 0.00 0.00 0.00 5.01
1847 2095 0.743701 GTCAGCAGGCACCAGATCTG 60.744 60.000 16.24 16.24 0.00 2.90
1848 2096 0.906282 TCAGCAGGCACCAGATCTGA 60.906 55.000 24.62 0.00 0.00 3.27
1849 2097 0.743701 CAGCAGGCACCAGATCTGAC 60.744 60.000 24.62 12.43 0.00 3.51
1850 2098 0.908656 AGCAGGCACCAGATCTGACT 60.909 55.000 24.62 12.89 0.00 3.41
1965 2213 2.005451 GAATCAGCAGCTCGTGATTGT 58.995 47.619 20.09 2.64 42.26 2.71
1970 2218 0.390340 GCAGCTCGTGATTGTCTCCA 60.390 55.000 0.00 0.00 0.00 3.86
1972 2220 1.931841 CAGCTCGTGATTGTCTCCATG 59.068 52.381 0.00 0.00 0.00 3.66
2087 2345 2.574955 GGATAGGAGGCGCGTGGAT 61.575 63.158 7.63 0.00 0.00 3.41
2152 2410 2.127232 CCATGGAAATCCCCGTGCC 61.127 63.158 5.56 0.00 40.92 5.01
2174 2432 0.882927 CAGCTTTTTGGGACGACGGA 60.883 55.000 0.00 0.00 0.00 4.69
2367 2625 3.095332 TCTTGTCTGTGATCTCTCCTGG 58.905 50.000 0.00 0.00 0.00 4.45
2371 2629 2.360801 GTCTGTGATCTCTCCTGGCTAC 59.639 54.545 0.00 0.00 0.00 3.58
2372 2630 1.336440 CTGTGATCTCTCCTGGCTACG 59.664 57.143 0.00 0.00 0.00 3.51
2373 2631 1.341089 TGTGATCTCTCCTGGCTACGT 60.341 52.381 0.00 0.00 0.00 3.57
2374 2632 2.092592 TGTGATCTCTCCTGGCTACGTA 60.093 50.000 0.00 0.00 0.00 3.57
2375 2633 2.291190 GTGATCTCTCCTGGCTACGTAC 59.709 54.545 0.00 0.00 0.00 3.67
2376 2634 1.532007 GATCTCTCCTGGCTACGTACG 59.468 57.143 15.01 15.01 0.00 3.67
2411 2669 3.310774 TGCGTATACGTCTCTCTGTTACC 59.689 47.826 25.04 5.56 42.22 2.85
2412 2670 3.559242 GCGTATACGTCTCTCTGTTACCT 59.441 47.826 25.04 0.00 42.22 3.08
2413 2671 4.034975 GCGTATACGTCTCTCTGTTACCTT 59.965 45.833 25.04 0.00 42.22 3.50
2414 2672 5.499935 CGTATACGTCTCTCTGTTACCTTG 58.500 45.833 17.16 0.00 34.11 3.61
2415 2673 2.726832 ACGTCTCTCTGTTACCTTGC 57.273 50.000 0.00 0.00 0.00 4.01
2416 2674 2.240279 ACGTCTCTCTGTTACCTTGCT 58.760 47.619 0.00 0.00 0.00 3.91
2417 2675 3.418995 ACGTCTCTCTGTTACCTTGCTA 58.581 45.455 0.00 0.00 0.00 3.49
2418 2676 4.017808 ACGTCTCTCTGTTACCTTGCTAT 58.982 43.478 0.00 0.00 0.00 2.97
2419 2677 5.191426 ACGTCTCTCTGTTACCTTGCTATA 58.809 41.667 0.00 0.00 0.00 1.31
2422 2680 7.666388 ACGTCTCTCTGTTACCTTGCTATATAT 59.334 37.037 0.00 0.00 0.00 0.86
2423 2681 9.163899 CGTCTCTCTGTTACCTTGCTATATATA 57.836 37.037 0.00 0.00 0.00 0.86
2498 2757 7.092137 TGAATCTTCTGAAGCATGTAAATGG 57.908 36.000 12.54 0.00 0.00 3.16
2505 2764 5.412594 TCTGAAGCATGTAAATGGTGTTCTC 59.587 40.000 0.00 0.00 31.98 2.87
2508 2767 3.441572 AGCATGTAAATGGTGTTCTCTGC 59.558 43.478 0.00 0.00 0.00 4.26
2520 2779 9.643693 AATGGTGTTCTCTGCTTAATAAATTTG 57.356 29.630 0.00 0.00 0.00 2.32
2523 2796 8.082242 GGTGTTCTCTGCTTAATAAATTTGTGT 58.918 33.333 0.00 0.00 0.00 3.72
2525 2798 8.015087 TGTTCTCTGCTTAATAAATTTGTGTCG 58.985 33.333 0.00 0.00 0.00 4.35
2527 2800 6.876789 TCTCTGCTTAATAAATTTGTGTCGGA 59.123 34.615 0.00 0.00 0.00 4.55
2549 2822 8.122330 TCGGATGATTCATTGATTAAAGAAACG 58.878 33.333 0.00 0.00 0.00 3.60
2565 2838 7.693969 AAAGAAACGAAGGATGAATGAATCT 57.306 32.000 0.00 0.00 0.00 2.40
2667 2940 1.759881 GATCCTGGAGCTCATGGGG 59.240 63.158 17.19 11.15 0.00 4.96
2774 3047 3.253230 ACAATTTTGCTAAAGCGCATCC 58.747 40.909 11.47 0.00 45.83 3.51
2783 3056 3.499918 GCTAAAGCGCATCCAGATATGTT 59.500 43.478 11.47 0.00 0.00 2.71
2787 3060 6.974932 AAAGCGCATCCAGATATGTTATAG 57.025 37.500 11.47 0.00 0.00 1.31
2798 3071 8.825774 TCCAGATATGTTATAGGTATTGCACAT 58.174 33.333 0.00 0.00 0.00 3.21
2799 3072 9.102757 CCAGATATGTTATAGGTATTGCACATC 57.897 37.037 0.00 0.00 0.00 3.06
2813 3086 9.929180 GGTATTGCACATCTAAGTCTTATATCA 57.071 33.333 0.00 0.00 0.00 2.15
2844 3117 3.817238 CCGAGTTTTAAATTCACACGGG 58.183 45.455 15.45 3.72 39.95 5.28
2851 3128 3.592856 AATTCACACGGGCGCGGTA 62.593 57.895 27.52 8.64 0.00 4.02
2893 3177 2.542178 GACAAACACGAGCATGTACACA 59.458 45.455 0.00 0.00 30.75 3.72
2894 3178 2.286833 ACAAACACGAGCATGTACACAC 59.713 45.455 0.00 0.00 30.75 3.82
2895 3179 1.136690 AACACGAGCATGTACACACG 58.863 50.000 0.00 4.54 30.75 4.49
2896 3180 0.031585 ACACGAGCATGTACACACGT 59.968 50.000 0.00 5.20 34.40 4.49
2984 3355 0.462581 CGTCTGTGCTGCCCATATGT 60.463 55.000 1.24 0.00 0.00 2.29
3090 3461 9.020813 ACAGCATTATTATTATCGCTACGTATG 57.979 33.333 0.00 0.00 0.00 2.39
3124 3500 1.516386 CGCCACTGTAGCAGTACGG 60.516 63.158 12.87 8.07 43.43 4.02
3237 3621 3.066203 GTGTCAAAAGTGAAACCATCCGT 59.934 43.478 0.00 0.00 36.14 4.69
3249 3633 5.418524 TGAAACCATCCGTTCATTCATTCAT 59.581 36.000 0.00 0.00 31.78 2.57
3250 3634 5.920193 AACCATCCGTTCATTCATTCATT 57.080 34.783 0.00 0.00 0.00 2.57
3255 3639 6.812656 CCATCCGTTCATTCATTCATTCAAAA 59.187 34.615 0.00 0.00 0.00 2.44
3256 3640 7.201461 CCATCCGTTCATTCATTCATTCAAAAC 60.201 37.037 0.00 0.00 0.00 2.43
3522 3927 1.288335 AGGTACTACTCCCACTCCCTG 59.712 57.143 0.00 0.00 36.02 4.45
3523 3928 1.112950 GTACTACTCCCACTCCCTGC 58.887 60.000 0.00 0.00 0.00 4.85
3524 3929 0.395311 TACTACTCCCACTCCCTGCG 60.395 60.000 0.00 0.00 0.00 5.18
3525 3930 3.075005 TACTCCCACTCCCTGCGC 61.075 66.667 0.00 0.00 0.00 6.09
3559 3964 1.079336 GGACGCCCGTTTTCTAGCT 60.079 57.895 0.00 0.00 0.00 3.32
3663 4068 7.822822 GCAATCTGTTCTTACTCCCTTTAGTTA 59.177 37.037 0.00 0.00 0.00 2.24
3761 4167 7.939784 AGTTCTTCCACCTCATAAAATAACC 57.060 36.000 0.00 0.00 0.00 2.85
3765 4171 8.292444 TCTTCCACCTCATAAAATAACCATTG 57.708 34.615 0.00 0.00 0.00 2.82
3766 4172 7.341769 TCTTCCACCTCATAAAATAACCATTGG 59.658 37.037 0.00 0.00 0.00 3.16
3767 4173 6.736581 TCCACCTCATAAAATAACCATTGGA 58.263 36.000 10.37 0.00 0.00 3.53
3768 4174 7.361438 TCCACCTCATAAAATAACCATTGGAT 58.639 34.615 10.37 0.00 0.00 3.41
3769 4175 7.287466 TCCACCTCATAAAATAACCATTGGATG 59.713 37.037 10.37 0.77 0.00 3.51
3780 4250 1.407299 CCATTGGATGGCGAACTGAGA 60.407 52.381 0.00 0.00 44.70 3.27
3854 4324 8.463930 TTGTGATAGTCCAACTTTTTCAATCT 57.536 30.769 0.00 0.00 0.00 2.40
3855 4325 9.567776 TTGTGATAGTCCAACTTTTTCAATCTA 57.432 29.630 0.00 0.00 0.00 1.98
3856 4326 9.567776 TGTGATAGTCCAACTTTTTCAATCTAA 57.432 29.630 0.00 0.00 0.00 2.10
3935 4405 6.261381 TGAACCACAAACTACACCTTAACATC 59.739 38.462 0.00 0.00 0.00 3.06
4010 4480 5.619981 CGAAAATGAAATCAAGGGGTGAGTC 60.620 44.000 0.00 0.00 40.43 3.36
4020 4490 3.922171 AGGGGTGAGTCAAATGATCTC 57.078 47.619 0.00 6.24 0.00 2.75
4094 4564 3.119101 GCTCCTCACGGTAGAAAGAATCA 60.119 47.826 0.00 0.00 0.00 2.57
4113 4583 6.552350 AGAATCATATGGGGAAAAATGGAGTG 59.448 38.462 2.13 0.00 0.00 3.51
4288 4922 5.586643 GGAAACCCATAGAAAGTGAGATGAC 59.413 44.000 0.00 0.00 0.00 3.06
4320 4954 9.261035 TCTCAATTTCTGTAGGAAAGAGATACT 57.739 33.333 5.02 0.00 45.61 2.12
4363 4997 5.259632 AGGATCTTTTTCATTGAGTCCAGG 58.740 41.667 0.00 0.00 0.00 4.45
4375 5009 8.262601 TCATTGAGTCCAGGCTAATAGATTTA 57.737 34.615 0.00 0.00 0.00 1.40
4411 5045 8.599624 AAATGTGAAATGATTGGTTCCTATCT 57.400 30.769 12.70 0.00 0.00 1.98
4445 5079 5.728741 ACAGGAATTCATTTCTACTCCCTCT 59.271 40.000 7.93 0.00 34.56 3.69
4473 5107 8.034215 TCCCATAATGTAAGACATTTTTGCAAG 58.966 33.333 9.92 0.00 45.80 4.01
4635 5273 8.801715 AGCACTTGATTGTTGTGTAATTTTAG 57.198 30.769 0.00 0.00 34.52 1.85
4658 5296 2.161855 TCCATGATGTGTGGCTTGTTC 58.838 47.619 0.00 0.00 36.66 3.18
4661 5299 2.183478 TGATGTGTGGCTTGTTCGAT 57.817 45.000 0.00 0.00 0.00 3.59
4762 5402 1.412343 AGGTTGCATTTGTGGTGGAAC 59.588 47.619 2.46 2.46 44.18 3.62
4792 5432 5.596845 AGTTAATGTGGTTGCGTTTCAAAT 58.403 33.333 0.00 0.00 36.26 2.32
4793 5433 5.461737 AGTTAATGTGGTTGCGTTTCAAATG 59.538 36.000 0.00 0.00 36.26 2.32
4797 5437 2.794350 GTGGTTGCGTTTCAAATGGAAG 59.206 45.455 0.00 0.00 36.72 3.46
4809 5449 6.761731 TTCAAATGGAAGTTAATGCGTTTG 57.238 33.333 0.00 8.27 44.33 2.93
4866 5506 3.512516 GGAAGCACCTGATGGCGC 61.513 66.667 0.00 0.00 41.47 6.53
5001 5641 4.227134 CGCCTCCAGGGACGATGG 62.227 72.222 0.00 0.00 36.98 3.51
5215 5861 1.227147 AGCAGTACAACGTGCGTGT 60.227 52.632 0.00 0.00 44.78 4.49
5230 5879 1.014044 CGTGTGCTACATTGCTCCGT 61.014 55.000 0.00 0.00 0.00 4.69
5234 5883 0.175760 TGCTACATTGCTCCGTCTCC 59.824 55.000 0.00 0.00 0.00 3.71
5251 5900 3.839432 CGTCTCCCTCTTCCCGCC 61.839 72.222 0.00 0.00 0.00 6.13
5264 5913 1.180456 TCCCGCCTTCACGTGACTAA 61.180 55.000 19.90 2.47 0.00 2.24
5315 5965 1.991965 GCGTTCGTAATAACCGGTTGA 59.008 47.619 30.08 15.02 0.00 3.18
5316 5966 2.604462 GCGTTCGTAATAACCGGTTGAT 59.396 45.455 30.08 19.53 0.00 2.57
5332 5983 3.816523 GGTTGATTTACCGTTTGTCCTCA 59.183 43.478 0.00 0.00 0.00 3.86
5415 6066 2.028130 CCTGCGCCCATGGTAATTAAA 58.972 47.619 11.73 0.00 0.00 1.52
5416 6067 2.034558 CCTGCGCCCATGGTAATTAAAG 59.965 50.000 11.73 0.00 0.00 1.85
5417 6068 2.687935 CTGCGCCCATGGTAATTAAAGT 59.312 45.455 11.73 0.00 0.00 2.66
5457 6109 6.767524 TGAATTATTTGCCCAGTCGTTAAT 57.232 33.333 0.00 0.00 0.00 1.40
5564 6236 1.893808 GCCGCATCCCATGTACAGG 60.894 63.158 0.33 0.00 0.00 4.00
5653 6325 0.253894 GCCCACCCGGTAAGTACATT 59.746 55.000 0.00 0.00 0.00 2.71
5654 6326 1.485895 GCCCACCCGGTAAGTACATTA 59.514 52.381 0.00 0.00 0.00 1.90
5655 6327 2.093021 GCCCACCCGGTAAGTACATTAA 60.093 50.000 0.00 0.00 0.00 1.40
5656 6328 3.434024 GCCCACCCGGTAAGTACATTAAT 60.434 47.826 0.00 0.00 0.00 1.40
5657 6329 4.784177 CCCACCCGGTAAGTACATTAATT 58.216 43.478 0.00 0.00 0.00 1.40
5659 6331 5.430007 CCACCCGGTAAGTACATTAATTCA 58.570 41.667 0.00 0.00 0.00 2.57
5719 6555 1.834188 GGACGGTGTTCCAATCCAAT 58.166 50.000 0.00 0.00 38.10 3.16
5720 6556 1.743394 GGACGGTGTTCCAATCCAATC 59.257 52.381 0.00 0.00 38.10 2.67
5721 6557 1.743394 GACGGTGTTCCAATCCAATCC 59.257 52.381 0.00 0.00 0.00 3.01
5725 6561 3.367292 CGGTGTTCCAATCCAATCCAAAG 60.367 47.826 0.00 0.00 0.00 2.77
5726 6562 3.588955 GTGTTCCAATCCAATCCAAAGC 58.411 45.455 0.00 0.00 0.00 3.51
5727 6563 3.006752 GTGTTCCAATCCAATCCAAAGCA 59.993 43.478 0.00 0.00 0.00 3.91
5728 6564 3.258872 TGTTCCAATCCAATCCAAAGCAG 59.741 43.478 0.00 0.00 0.00 4.24
5736 6572 4.635223 TCCAATCCAAAGCAGAGATATCG 58.365 43.478 0.00 0.00 0.00 2.92
5745 6581 8.316946 TCCAAAGCAGAGATATCGATTGATTAT 58.683 33.333 1.71 0.00 35.99 1.28
5783 6644 9.214957 CTTTGTGTTCAATTCCCGCTATATATA 57.785 33.333 0.00 0.00 33.32 0.86
5818 6683 2.159184 TCCTGATTTTTGTTGCACGCAA 60.159 40.909 0.00 0.00 0.00 4.85
5827 6692 1.082431 TTGCACGCAACGCATGTAC 60.082 52.632 0.00 0.00 39.58 2.90
6065 6935 3.145551 CATGCTGCTGCTTCCCCC 61.146 66.667 17.00 0.00 40.48 5.40
6141 7011 1.030457 GGTATGACTGATCGACCGGT 58.970 55.000 6.92 6.92 0.00 5.28
6142 7012 1.407979 GGTATGACTGATCGACCGGTT 59.592 52.381 9.42 0.00 0.00 4.44
6182 7052 4.610905 CGTGCGCGTCTAGATTAATACTCT 60.611 45.833 12.43 0.00 0.00 3.24
6183 7053 5.389202 CGTGCGCGTCTAGATTAATACTCTA 60.389 44.000 12.43 0.00 0.00 2.43
6184 7054 5.789512 GTGCGCGTCTAGATTAATACTCTAC 59.210 44.000 8.43 0.00 0.00 2.59
6186 7056 5.549159 CGCGTCTAGATTAATACTCTACGG 58.451 45.833 0.00 8.32 0.00 4.02
6187 7057 5.347093 CGCGTCTAGATTAATACTCTACGGA 59.653 44.000 0.00 0.00 0.00 4.69
6188 7058 6.454054 CGCGTCTAGATTAATACTCTACGGAG 60.454 46.154 0.00 0.00 44.62 4.63
6378 7249 6.127479 TGGTAAATGAATAACCAAGGATGCAC 60.127 38.462 0.00 0.00 40.28 4.57
6379 7250 5.999205 AAATGAATAACCAAGGATGCACA 57.001 34.783 0.00 0.00 0.00 4.57
6420 7291 3.344904 GCACTTGCATATTTCTGCGAT 57.655 42.857 0.00 0.00 45.30 4.58
6435 7306 2.615447 CTGCGATATTCCACACTTGCAT 59.385 45.455 0.00 0.00 0.00 3.96
6458 7329 4.891627 TTTCTGCGAAATGTGAGAAACA 57.108 36.364 0.00 0.00 44.79 2.83
6508 7385 5.474532 ACAGAAACTCTTTATCTGCATGCAA 59.525 36.000 22.88 13.05 43.41 4.08
6527 7404 4.929808 TGCAAAAACAAGCTTTTCGGTAAA 59.070 33.333 0.00 0.00 0.00 2.01
6619 7500 5.672653 TGTACCAGGAAATATAATGTGGGGA 59.327 40.000 0.00 0.00 0.00 4.81
6660 7542 5.142110 AAGCACATTTGTGATCGATGCAAC 61.142 41.667 14.66 0.00 44.74 4.17
6661 7543 7.505396 AAGCACATTTGTGATCGATGCAACA 62.505 40.000 14.66 1.47 44.74 3.33
6664 7546 5.472148 ACATTTGTGATCGATGCAACAAAT 58.528 33.333 24.22 24.22 38.01 2.32
6666 7548 6.089820 ACATTTGTGATCGATGCAACAAATTC 59.910 34.615 25.86 5.01 36.17 2.17
6667 7549 4.762956 TGTGATCGATGCAACAAATTCA 57.237 36.364 0.54 0.00 0.00 2.57
6669 7551 5.155643 TGTGATCGATGCAACAAATTCAAG 58.844 37.500 0.54 0.00 0.00 3.02
6670 7552 5.048852 TGTGATCGATGCAACAAATTCAAGA 60.049 36.000 0.54 0.00 0.00 3.02
6671 7553 6.032094 GTGATCGATGCAACAAATTCAAGAT 58.968 36.000 0.54 0.00 0.00 2.40
6672 7554 6.020916 GTGATCGATGCAACAAATTCAAGATG 60.021 38.462 0.54 0.00 0.00 2.90
6673 7555 4.168014 TCGATGCAACAAATTCAAGATGC 58.832 39.130 0.00 0.00 34.57 3.91
6678 7560 3.181514 GCAACAAATTCAAGATGCATGCC 60.182 43.478 16.68 0.00 34.21 4.40
6799 7707 3.815401 ACTGACTTGAGTACACCAAATGC 59.185 43.478 0.00 0.00 0.00 3.56
6833 7741 2.111384 AGGAGACAGCCGACACATAAT 58.889 47.619 0.00 0.00 0.00 1.28
6834 7742 2.101582 AGGAGACAGCCGACACATAATC 59.898 50.000 0.00 0.00 0.00 1.75
6835 7743 2.101582 GGAGACAGCCGACACATAATCT 59.898 50.000 0.00 0.00 0.00 2.40
6836 7744 3.430929 GGAGACAGCCGACACATAATCTT 60.431 47.826 0.00 0.00 0.00 2.40
6837 7745 4.184629 GAGACAGCCGACACATAATCTTT 58.815 43.478 0.00 0.00 0.00 2.52
6838 7746 4.579869 AGACAGCCGACACATAATCTTTT 58.420 39.130 0.00 0.00 0.00 2.27
6839 7747 4.631813 AGACAGCCGACACATAATCTTTTC 59.368 41.667 0.00 0.00 0.00 2.29
6840 7748 4.579869 ACAGCCGACACATAATCTTTTCT 58.420 39.130 0.00 0.00 0.00 2.52
6841 7749 4.631813 ACAGCCGACACATAATCTTTTCTC 59.368 41.667 0.00 0.00 0.00 2.87
6842 7750 4.872691 CAGCCGACACATAATCTTTTCTCT 59.127 41.667 0.00 0.00 0.00 3.10
6843 7751 5.006165 CAGCCGACACATAATCTTTTCTCTC 59.994 44.000 0.00 0.00 0.00 3.20
6844 7752 5.105146 AGCCGACACATAATCTTTTCTCTCT 60.105 40.000 0.00 0.00 0.00 3.10
6845 7753 5.582665 GCCGACACATAATCTTTTCTCTCTT 59.417 40.000 0.00 0.00 0.00 2.85
6846 7754 6.092807 GCCGACACATAATCTTTTCTCTCTTT 59.907 38.462 0.00 0.00 0.00 2.52
6847 7755 7.361286 GCCGACACATAATCTTTTCTCTCTTTT 60.361 37.037 0.00 0.00 0.00 2.27
6848 7756 8.507249 CCGACACATAATCTTTTCTCTCTTTTT 58.493 33.333 0.00 0.00 0.00 1.94
6879 7787 9.489084 AAACTAGGCAAAAGATTTACCATTTTC 57.511 29.630 0.00 0.00 0.00 2.29
6880 7788 8.189119 ACTAGGCAAAAGATTTACCATTTTCA 57.811 30.769 0.00 0.00 0.00 2.69
6881 7789 8.815912 ACTAGGCAAAAGATTTACCATTTTCAT 58.184 29.630 0.00 0.00 0.00 2.57
6882 7790 9.657419 CTAGGCAAAAGATTTACCATTTTCATT 57.343 29.630 0.00 0.00 0.00 2.57
6883 7791 8.326680 AGGCAAAAGATTTACCATTTTCATTG 57.673 30.769 0.00 0.00 0.00 2.82
6884 7792 8.156165 AGGCAAAAGATTTACCATTTTCATTGA 58.844 29.630 0.00 0.00 0.00 2.57
6885 7793 8.949177 GGCAAAAGATTTACCATTTTCATTGAT 58.051 29.630 0.00 0.00 0.00 2.57
6897 7805 9.525826 ACCATTTTCATTGATTAAGAGAGAAGT 57.474 29.630 0.00 0.00 0.00 3.01
6912 7820 6.703319 AGAGAGAAGTTTTAGAGGTTAAGGC 58.297 40.000 0.00 0.00 0.00 4.35
6913 7821 5.806818 AGAGAAGTTTTAGAGGTTAAGGCC 58.193 41.667 0.00 0.00 0.00 5.19
6914 7822 5.309806 AGAGAAGTTTTAGAGGTTAAGGCCA 59.690 40.000 5.01 0.00 0.00 5.36
6915 7823 5.948842 AGAAGTTTTAGAGGTTAAGGCCAA 58.051 37.500 5.01 0.00 0.00 4.52
6916 7824 6.370453 AGAAGTTTTAGAGGTTAAGGCCAAA 58.630 36.000 5.01 0.00 0.00 3.28
6917 7825 6.490381 AGAAGTTTTAGAGGTTAAGGCCAAAG 59.510 38.462 5.01 0.00 0.00 2.77
6918 7826 5.077564 AGTTTTAGAGGTTAAGGCCAAAGG 58.922 41.667 5.01 0.00 0.00 3.11
6930 7838 1.990799 GCCAAAGGCCGAATTACAAC 58.009 50.000 0.00 0.00 44.06 3.32
6931 7839 1.271102 GCCAAAGGCCGAATTACAACA 59.729 47.619 0.00 0.00 44.06 3.33
6932 7840 2.288518 GCCAAAGGCCGAATTACAACAA 60.289 45.455 0.00 0.00 44.06 2.83
6933 7841 3.616317 GCCAAAGGCCGAATTACAACAAT 60.616 43.478 0.00 0.00 44.06 2.71
6934 7842 4.173256 CCAAAGGCCGAATTACAACAATC 58.827 43.478 0.00 0.00 0.00 2.67
6935 7843 4.321601 CCAAAGGCCGAATTACAACAATCA 60.322 41.667 0.00 0.00 0.00 2.57
6936 7844 4.434713 AAGGCCGAATTACAACAATCAC 57.565 40.909 0.00 0.00 0.00 3.06
6937 7845 3.686016 AGGCCGAATTACAACAATCACT 58.314 40.909 0.00 0.00 0.00 3.41
6938 7846 3.689649 AGGCCGAATTACAACAATCACTC 59.310 43.478 0.00 0.00 0.00 3.51
6939 7847 3.689649 GGCCGAATTACAACAATCACTCT 59.310 43.478 0.00 0.00 0.00 3.24
6940 7848 4.201822 GGCCGAATTACAACAATCACTCTC 60.202 45.833 0.00 0.00 0.00 3.20
6941 7849 4.391830 GCCGAATTACAACAATCACTCTCA 59.608 41.667 0.00 0.00 0.00 3.27
6942 7850 5.065218 GCCGAATTACAACAATCACTCTCAT 59.935 40.000 0.00 0.00 0.00 2.90
6943 7851 6.709643 CCGAATTACAACAATCACTCTCATC 58.290 40.000 0.00 0.00 0.00 2.92
6944 7852 6.238211 CCGAATTACAACAATCACTCTCATCC 60.238 42.308 0.00 0.00 0.00 3.51
6945 7853 6.313658 CGAATTACAACAATCACTCTCATCCA 59.686 38.462 0.00 0.00 0.00 3.41
6946 7854 7.011763 CGAATTACAACAATCACTCTCATCCAT 59.988 37.037 0.00 0.00 0.00 3.41
6947 7855 7.798596 ATTACAACAATCACTCTCATCCATC 57.201 36.000 0.00 0.00 0.00 3.51
6948 7856 5.169992 ACAACAATCACTCTCATCCATCA 57.830 39.130 0.00 0.00 0.00 3.07
6949 7857 5.752650 ACAACAATCACTCTCATCCATCAT 58.247 37.500 0.00 0.00 0.00 2.45
6950 7858 6.892485 ACAACAATCACTCTCATCCATCATA 58.108 36.000 0.00 0.00 0.00 2.15
6951 7859 6.990939 ACAACAATCACTCTCATCCATCATAG 59.009 38.462 0.00 0.00 0.00 2.23
6952 7860 6.111669 ACAATCACTCTCATCCATCATAGG 57.888 41.667 0.00 0.00 0.00 2.57
6953 7861 5.605908 ACAATCACTCTCATCCATCATAGGT 59.394 40.000 0.00 0.00 0.00 3.08
6954 7862 5.741962 ATCACTCTCATCCATCATAGGTG 57.258 43.478 0.00 0.00 0.00 4.00
6955 7863 3.323115 TCACTCTCATCCATCATAGGTGC 59.677 47.826 0.00 0.00 0.00 5.01
6956 7864 3.324268 CACTCTCATCCATCATAGGTGCT 59.676 47.826 0.00 0.00 0.00 4.40
6957 7865 3.324268 ACTCTCATCCATCATAGGTGCTG 59.676 47.826 0.00 0.00 0.00 4.41
6958 7866 2.636403 TCTCATCCATCATAGGTGCTGG 59.364 50.000 0.00 0.00 41.87 4.85
6959 7867 1.072806 TCATCCATCATAGGTGCTGGC 59.927 52.381 0.00 0.00 40.62 4.85
6960 7868 1.142936 ATCCATCATAGGTGCTGGCA 58.857 50.000 0.00 0.00 40.62 4.92
6961 7869 1.142936 TCCATCATAGGTGCTGGCAT 58.857 50.000 0.00 0.00 40.62 4.40
6962 7870 2.337849 TCCATCATAGGTGCTGGCATA 58.662 47.619 0.00 0.00 40.62 3.14
6963 7871 2.710471 TCCATCATAGGTGCTGGCATAA 59.290 45.455 0.00 0.00 40.62 1.90
6964 7872 3.138098 TCCATCATAGGTGCTGGCATAAA 59.862 43.478 0.00 0.00 40.62 1.40
6965 7873 3.504906 CCATCATAGGTGCTGGCATAAAG 59.495 47.826 0.00 0.00 35.08 1.85
6966 7874 3.213206 TCATAGGTGCTGGCATAAAGG 57.787 47.619 0.00 0.00 0.00 3.11
6967 7875 1.610522 CATAGGTGCTGGCATAAAGGC 59.389 52.381 0.00 0.00 44.50 4.35
6978 7886 3.728845 GGCATAAAGGCGTTCATAGAGA 58.271 45.455 0.00 0.00 33.57 3.10
6979 7887 4.127171 GGCATAAAGGCGTTCATAGAGAA 58.873 43.478 0.00 0.00 33.57 2.87
6980 7888 4.757149 GGCATAAAGGCGTTCATAGAGAAT 59.243 41.667 0.00 0.00 38.76 2.40
6981 7889 5.932303 GGCATAAAGGCGTTCATAGAGAATA 59.068 40.000 0.00 0.00 38.76 1.75
6982 7890 6.426937 GGCATAAAGGCGTTCATAGAGAATAA 59.573 38.462 0.00 0.00 38.76 1.40
6983 7891 7.291567 GCATAAAGGCGTTCATAGAGAATAAC 58.708 38.462 0.00 0.00 38.76 1.89
6984 7892 7.042051 GCATAAAGGCGTTCATAGAGAATAACA 60.042 37.037 0.00 0.00 38.76 2.41
6985 7893 6.663944 AAAGGCGTTCATAGAGAATAACAC 57.336 37.500 0.00 0.00 38.76 3.32
6986 7894 5.339008 AGGCGTTCATAGAGAATAACACA 57.661 39.130 0.00 0.00 38.76 3.72
6987 7895 5.352284 AGGCGTTCATAGAGAATAACACAG 58.648 41.667 0.00 0.00 38.76 3.66
6988 7896 5.105310 AGGCGTTCATAGAGAATAACACAGT 60.105 40.000 0.00 0.00 38.76 3.55
6989 7897 6.096423 AGGCGTTCATAGAGAATAACACAGTA 59.904 38.462 0.00 0.00 38.76 2.74
6990 7898 6.198591 GGCGTTCATAGAGAATAACACAGTAC 59.801 42.308 0.00 0.00 38.76 2.73
6991 7899 6.750501 GCGTTCATAGAGAATAACACAGTACA 59.249 38.462 0.00 0.00 38.76 2.90
6992 7900 7.435488 GCGTTCATAGAGAATAACACAGTACAT 59.565 37.037 0.00 0.00 38.76 2.29
6993 7901 9.946165 CGTTCATAGAGAATAACACAGTACATA 57.054 33.333 0.00 0.00 38.76 2.29
7000 7908 9.682465 AGAGAATAACACAGTACATACTACAGA 57.318 33.333 0.00 0.00 34.13 3.41
7001 7909 9.719279 GAGAATAACACAGTACATACTACAGAC 57.281 37.037 0.00 0.00 34.13 3.51
7002 7910 9.463902 AGAATAACACAGTACATACTACAGACT 57.536 33.333 0.00 0.00 34.13 3.24
7007 7915 9.688592 AACACAGTACATACTACAGACTTTTAC 57.311 33.333 0.00 0.00 34.13 2.01
7008 7916 8.853126 ACACAGTACATACTACAGACTTTTACA 58.147 33.333 0.00 0.00 34.13 2.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 6.252869 GCAAGCAGTTAGAACATTCATCAATG 59.747 38.462 0.00 0.00 44.57 2.82
6 7 6.071784 TGCAAGCAGTTAGAACATTCATCAAT 60.072 34.615 0.00 0.00 0.00 2.57
7 8 5.241285 TGCAAGCAGTTAGAACATTCATCAA 59.759 36.000 0.00 0.00 0.00 2.57
8 9 4.761227 TGCAAGCAGTTAGAACATTCATCA 59.239 37.500 0.00 0.00 0.00 3.07
9 10 5.300969 TGCAAGCAGTTAGAACATTCATC 57.699 39.130 0.00 0.00 0.00 2.92
10 11 5.710513 TTGCAAGCAGTTAGAACATTCAT 57.289 34.783 0.00 0.00 0.00 2.57
11 12 5.512753 TTTGCAAGCAGTTAGAACATTCA 57.487 34.783 0.00 0.00 0.00 2.57
12 13 7.412137 AATTTTGCAAGCAGTTAGAACATTC 57.588 32.000 0.00 0.00 0.00 2.67
13 14 7.495279 TGAAATTTTGCAAGCAGTTAGAACATT 59.505 29.630 0.00 0.00 0.00 2.71
14 15 6.985645 TGAAATTTTGCAAGCAGTTAGAACAT 59.014 30.769 0.00 0.00 0.00 2.71
15 16 6.336566 TGAAATTTTGCAAGCAGTTAGAACA 58.663 32.000 0.00 0.00 0.00 3.18
16 17 6.074142 CCTGAAATTTTGCAAGCAGTTAGAAC 60.074 38.462 0.00 0.00 0.00 3.01
17 18 5.984926 CCTGAAATTTTGCAAGCAGTTAGAA 59.015 36.000 0.00 0.00 0.00 2.10
18 19 5.068987 ACCTGAAATTTTGCAAGCAGTTAGA 59.931 36.000 0.00 0.00 0.00 2.10
19 20 5.291971 ACCTGAAATTTTGCAAGCAGTTAG 58.708 37.500 0.00 0.00 0.00 2.34
20 21 5.275067 ACCTGAAATTTTGCAAGCAGTTA 57.725 34.783 0.00 0.00 0.00 2.24
21 22 4.141233 ACCTGAAATTTTGCAAGCAGTT 57.859 36.364 0.00 0.00 0.00 3.16
22 23 3.825143 ACCTGAAATTTTGCAAGCAGT 57.175 38.095 0.00 0.00 0.00 4.40
23 24 4.121317 TCAACCTGAAATTTTGCAAGCAG 58.879 39.130 0.00 4.08 0.00 4.24
24 25 4.134379 TCAACCTGAAATTTTGCAAGCA 57.866 36.364 0.00 0.00 0.00 3.91
25 26 5.482686 TTTCAACCTGAAATTTTGCAAGC 57.517 34.783 0.00 0.00 41.02 4.01
36 37 4.039004 CCACCAATGTCATTTCAACCTGAA 59.961 41.667 0.00 0.00 34.03 3.02
37 38 3.573538 CCACCAATGTCATTTCAACCTGA 59.426 43.478 0.00 0.00 0.00 3.86
38 39 3.573538 TCCACCAATGTCATTTCAACCTG 59.426 43.478 0.00 0.00 0.00 4.00
39 40 3.828451 CTCCACCAATGTCATTTCAACCT 59.172 43.478 0.00 0.00 0.00 3.50
40 41 3.056607 CCTCCACCAATGTCATTTCAACC 60.057 47.826 0.00 0.00 0.00 3.77
41 42 3.573967 ACCTCCACCAATGTCATTTCAAC 59.426 43.478 0.00 0.00 0.00 3.18
42 43 3.843422 ACCTCCACCAATGTCATTTCAA 58.157 40.909 0.00 0.00 0.00 2.69
43 44 3.524095 ACCTCCACCAATGTCATTTCA 57.476 42.857 0.00 0.00 0.00 2.69
44 45 4.559153 CAAACCTCCACCAATGTCATTTC 58.441 43.478 0.00 0.00 0.00 2.17
45 46 3.324556 CCAAACCTCCACCAATGTCATTT 59.675 43.478 0.00 0.00 0.00 2.32
46 47 2.899256 CCAAACCTCCACCAATGTCATT 59.101 45.455 0.00 0.00 0.00 2.57
47 48 2.109834 TCCAAACCTCCACCAATGTCAT 59.890 45.455 0.00 0.00 0.00 3.06
48 49 1.496857 TCCAAACCTCCACCAATGTCA 59.503 47.619 0.00 0.00 0.00 3.58
49 50 1.886542 GTCCAAACCTCCACCAATGTC 59.113 52.381 0.00 0.00 0.00 3.06
50 51 1.216678 TGTCCAAACCTCCACCAATGT 59.783 47.619 0.00 0.00 0.00 2.71
51 52 1.993956 TGTCCAAACCTCCACCAATG 58.006 50.000 0.00 0.00 0.00 2.82
52 53 2.765689 TTGTCCAAACCTCCACCAAT 57.234 45.000 0.00 0.00 0.00 3.16
53 54 2.534042 TTTGTCCAAACCTCCACCAA 57.466 45.000 0.00 0.00 0.00 3.67
54 55 2.534042 TTTTGTCCAAACCTCCACCA 57.466 45.000 0.00 0.00 0.00 4.17
73 74 7.784633 AACAAAATCAATGACCATCGTTTTT 57.215 28.000 0.00 0.00 0.00 1.94
74 75 9.487790 AATAACAAAATCAATGACCATCGTTTT 57.512 25.926 0.00 0.00 0.00 2.43
75 76 9.487790 AAATAACAAAATCAATGACCATCGTTT 57.512 25.926 0.00 0.00 0.00 3.60
76 77 9.487790 AAAATAACAAAATCAATGACCATCGTT 57.512 25.926 0.00 0.00 0.00 3.85
77 78 9.487790 AAAAATAACAAAATCAATGACCATCGT 57.512 25.926 0.00 0.00 0.00 3.73
78 79 9.743937 CAAAAATAACAAAATCAATGACCATCG 57.256 29.630 0.00 0.00 0.00 3.84
79 80 9.545611 GCAAAAATAACAAAATCAATGACCATC 57.454 29.630 0.00 0.00 0.00 3.51
80 81 8.513774 GGCAAAAATAACAAAATCAATGACCAT 58.486 29.630 0.00 0.00 0.00 3.55
81 82 7.040823 GGGCAAAAATAACAAAATCAATGACCA 60.041 33.333 0.00 0.00 32.42 4.02
82 83 7.040823 TGGGCAAAAATAACAAAATCAATGACC 60.041 33.333 0.00 0.00 32.78 4.02
83 84 7.869800 TGGGCAAAAATAACAAAATCAATGAC 58.130 30.769 0.00 0.00 0.00 3.06
84 85 8.455903 TTGGGCAAAAATAACAAAATCAATGA 57.544 26.923 0.00 0.00 0.00 2.57
85 86 8.966194 GTTTGGGCAAAAATAACAAAATCAATG 58.034 29.630 0.00 0.00 33.43 2.82
86 87 8.140628 GGTTTGGGCAAAAATAACAAAATCAAT 58.859 29.630 0.00 0.00 33.43 2.57
87 88 7.340487 AGGTTTGGGCAAAAATAACAAAATCAA 59.660 29.630 0.00 0.00 33.43 2.57
88 89 6.830838 AGGTTTGGGCAAAAATAACAAAATCA 59.169 30.769 0.00 0.00 33.43 2.57
89 90 7.270757 AGGTTTGGGCAAAAATAACAAAATC 57.729 32.000 0.00 0.00 33.43 2.17
90 91 6.264292 GGAGGTTTGGGCAAAAATAACAAAAT 59.736 34.615 0.00 0.00 33.43 1.82
91 92 5.590663 GGAGGTTTGGGCAAAAATAACAAAA 59.409 36.000 0.00 0.00 33.43 2.44
92 93 5.126779 GGAGGTTTGGGCAAAAATAACAAA 58.873 37.500 0.00 0.00 31.33 2.83
93 94 4.164221 TGGAGGTTTGGGCAAAAATAACAA 59.836 37.500 0.00 0.00 31.33 2.83
94 95 3.711704 TGGAGGTTTGGGCAAAAATAACA 59.288 39.130 0.00 0.00 31.33 2.41
95 96 4.062293 GTGGAGGTTTGGGCAAAAATAAC 58.938 43.478 0.00 0.00 31.33 1.89
96 97 3.970640 AGTGGAGGTTTGGGCAAAAATAA 59.029 39.130 0.00 0.00 31.33 1.40
97 98 3.582164 AGTGGAGGTTTGGGCAAAAATA 58.418 40.909 0.00 0.00 31.33 1.40
98 99 2.407562 AGTGGAGGTTTGGGCAAAAAT 58.592 42.857 0.00 0.00 31.33 1.82
99 100 1.872773 AGTGGAGGTTTGGGCAAAAA 58.127 45.000 0.00 0.00 31.33 1.94
100 101 2.757894 TAGTGGAGGTTTGGGCAAAA 57.242 45.000 0.00 0.00 31.33 2.44
101 102 2.757894 TTAGTGGAGGTTTGGGCAAA 57.242 45.000 0.00 0.00 0.00 3.68
102 103 2.158385 ACATTAGTGGAGGTTTGGGCAA 60.158 45.455 0.00 0.00 0.00 4.52
103 104 1.427368 ACATTAGTGGAGGTTTGGGCA 59.573 47.619 0.00 0.00 0.00 5.36
104 105 2.092323 GACATTAGTGGAGGTTTGGGC 58.908 52.381 0.00 0.00 0.00 5.36
105 106 3.433306 TGACATTAGTGGAGGTTTGGG 57.567 47.619 0.00 0.00 0.00 4.12
106 107 5.391950 CGAAATGACATTAGTGGAGGTTTGG 60.392 44.000 0.00 0.00 0.00 3.28
107 108 5.411361 TCGAAATGACATTAGTGGAGGTTTG 59.589 40.000 0.00 0.00 0.00 2.93
108 109 5.556915 TCGAAATGACATTAGTGGAGGTTT 58.443 37.500 0.00 0.00 0.00 3.27
109 110 5.160607 TCGAAATGACATTAGTGGAGGTT 57.839 39.130 0.00 0.00 0.00 3.50
110 111 4.819105 TCGAAATGACATTAGTGGAGGT 57.181 40.909 0.00 0.00 0.00 3.85
127 128 2.723658 GCGTGCAAAATTTCATGTCGAA 59.276 40.909 0.00 0.00 0.00 3.71
128 129 2.287248 TGCGTGCAAAATTTCATGTCGA 60.287 40.909 0.00 0.00 0.00 4.20
129 130 2.049959 TGCGTGCAAAATTTCATGTCG 58.950 42.857 0.00 0.00 0.00 4.35
130 131 3.052036 ACTGCGTGCAAAATTTCATGTC 58.948 40.909 0.00 0.00 0.00 3.06
131 132 3.096489 ACTGCGTGCAAAATTTCATGT 57.904 38.095 0.00 0.00 0.00 3.21
132 133 4.916831 TCTAACTGCGTGCAAAATTTCATG 59.083 37.500 0.00 0.00 0.00 3.07
133 134 5.119931 TCTAACTGCGTGCAAAATTTCAT 57.880 34.783 0.00 0.00 0.00 2.57
134 135 4.560136 TCTAACTGCGTGCAAAATTTCA 57.440 36.364 0.00 0.00 0.00 2.69
135 136 5.881637 TTTCTAACTGCGTGCAAAATTTC 57.118 34.783 0.00 0.00 0.00 2.17
136 137 6.843069 ATTTTCTAACTGCGTGCAAAATTT 57.157 29.167 0.00 0.00 0.00 1.82
137 138 6.843069 AATTTTCTAACTGCGTGCAAAATT 57.157 29.167 6.77 6.77 0.00 1.82
138 139 6.843069 AAATTTTCTAACTGCGTGCAAAAT 57.157 29.167 0.00 0.00 0.00 1.82
139 140 7.649705 TGATAAATTTTCTAACTGCGTGCAAAA 59.350 29.630 0.00 0.00 0.00 2.44
140 141 7.142021 TGATAAATTTTCTAACTGCGTGCAAA 58.858 30.769 0.00 0.00 0.00 3.68
141 142 6.673106 TGATAAATTTTCTAACTGCGTGCAA 58.327 32.000 0.00 0.00 0.00 4.08
142 143 6.247727 TGATAAATTTTCTAACTGCGTGCA 57.752 33.333 0.00 0.00 0.00 4.57
143 144 7.273381 ACATTGATAAATTTTCTAACTGCGTGC 59.727 33.333 0.00 0.00 0.00 5.34
144 145 8.673626 ACATTGATAAATTTTCTAACTGCGTG 57.326 30.769 0.00 0.00 0.00 5.34
145 146 9.341899 GAACATTGATAAATTTTCTAACTGCGT 57.658 29.630 0.00 0.00 0.00 5.24
146 147 9.340695 TGAACATTGATAAATTTTCTAACTGCG 57.659 29.630 0.00 0.00 0.00 5.18
209 210 9.545105 TGCATGAACAGTAAATTCTTGAAAAAT 57.455 25.926 0.00 0.00 34.67 1.82
210 211 8.939201 TGCATGAACAGTAAATTCTTGAAAAA 57.061 26.923 0.00 0.00 34.67 1.94
211 212 7.652909 CCTGCATGAACAGTAAATTCTTGAAAA 59.347 33.333 0.00 0.00 34.67 2.29
212 213 7.014134 TCCTGCATGAACAGTAAATTCTTGAAA 59.986 33.333 0.00 0.00 34.67 2.69
213 214 6.489700 TCCTGCATGAACAGTAAATTCTTGAA 59.510 34.615 0.00 0.00 34.67 2.69
214 215 6.003326 TCCTGCATGAACAGTAAATTCTTGA 58.997 36.000 0.00 0.00 34.67 3.02
215 216 6.258230 TCCTGCATGAACAGTAAATTCTTG 57.742 37.500 0.00 0.00 35.83 3.02
216 217 5.105997 GCTCCTGCATGAACAGTAAATTCTT 60.106 40.000 0.00 0.00 39.41 2.52
217 218 4.397417 GCTCCTGCATGAACAGTAAATTCT 59.603 41.667 0.00 0.00 39.41 2.40
218 219 4.156556 TGCTCCTGCATGAACAGTAAATTC 59.843 41.667 0.00 0.00 45.31 2.17
219 220 4.081406 TGCTCCTGCATGAACAGTAAATT 58.919 39.130 0.00 0.00 45.31 1.82
220 221 3.689347 TGCTCCTGCATGAACAGTAAAT 58.311 40.909 0.00 0.00 45.31 1.40
221 222 3.138884 TGCTCCTGCATGAACAGTAAA 57.861 42.857 0.00 0.00 45.31 2.01
222 223 2.857186 TGCTCCTGCATGAACAGTAA 57.143 45.000 0.00 0.00 45.31 2.24
233 234 1.506493 CCGAACTCATATGCTCCTGC 58.494 55.000 0.00 0.00 40.20 4.85
234 235 1.688735 TCCCGAACTCATATGCTCCTG 59.311 52.381 0.00 0.00 0.00 3.86
235 236 2.088104 TCCCGAACTCATATGCTCCT 57.912 50.000 0.00 0.00 0.00 3.69
236 237 2.300152 TGATCCCGAACTCATATGCTCC 59.700 50.000 0.00 0.00 0.00 4.70
237 238 3.667497 TGATCCCGAACTCATATGCTC 57.333 47.619 0.00 0.00 0.00 4.26
238 239 4.422073 TTTGATCCCGAACTCATATGCT 57.578 40.909 0.00 0.00 0.00 3.79
239 240 5.934625 AGTATTTGATCCCGAACTCATATGC 59.065 40.000 0.00 0.00 0.00 3.14
240 241 6.591834 GGAGTATTTGATCCCGAACTCATATG 59.408 42.308 13.90 0.00 36.03 1.78
241 242 6.270000 TGGAGTATTTGATCCCGAACTCATAT 59.730 38.462 13.90 0.00 36.03 1.78
242 243 5.600898 TGGAGTATTTGATCCCGAACTCATA 59.399 40.000 13.90 3.95 36.03 2.15
243 244 4.408921 TGGAGTATTTGATCCCGAACTCAT 59.591 41.667 13.90 0.00 36.03 2.90
244 245 3.772572 TGGAGTATTTGATCCCGAACTCA 59.227 43.478 13.90 2.66 36.03 3.41
245 246 4.402056 TGGAGTATTTGATCCCGAACTC 57.598 45.455 6.77 6.77 34.47 3.01
246 247 4.164221 ACATGGAGTATTTGATCCCGAACT 59.836 41.667 0.00 0.00 34.47 3.01
247 248 4.451900 ACATGGAGTATTTGATCCCGAAC 58.548 43.478 0.00 0.00 34.47 3.95
248 249 4.444306 GGACATGGAGTATTTGATCCCGAA 60.444 45.833 0.00 0.00 34.47 4.30
249 250 3.071023 GGACATGGAGTATTTGATCCCGA 59.929 47.826 0.00 0.00 34.47 5.14
250 251 3.403038 GGACATGGAGTATTTGATCCCG 58.597 50.000 0.00 0.00 34.47 5.14
251 252 3.395941 AGGGACATGGAGTATTTGATCCC 59.604 47.826 0.00 0.00 44.25 3.85
252 253 4.713792 AGGGACATGGAGTATTTGATCC 57.286 45.455 0.00 0.00 36.05 3.36
253 254 5.998363 GGTAAGGGACATGGAGTATTTGATC 59.002 44.000 0.00 0.00 0.00 2.92
254 255 5.454755 CGGTAAGGGACATGGAGTATTTGAT 60.455 44.000 0.00 0.00 0.00 2.57
255 256 4.141801 CGGTAAGGGACATGGAGTATTTGA 60.142 45.833 0.00 0.00 0.00 2.69
256 257 4.127171 CGGTAAGGGACATGGAGTATTTG 58.873 47.826 0.00 0.00 0.00 2.32
257 258 3.778629 ACGGTAAGGGACATGGAGTATTT 59.221 43.478 0.00 0.00 0.00 1.40
258 259 3.381335 ACGGTAAGGGACATGGAGTATT 58.619 45.455 0.00 0.00 0.00 1.89
259 260 3.042059 ACGGTAAGGGACATGGAGTAT 57.958 47.619 0.00 0.00 0.00 2.12
260 261 2.537633 ACGGTAAGGGACATGGAGTA 57.462 50.000 0.00 0.00 0.00 2.59
261 262 2.105766 GTACGGTAAGGGACATGGAGT 58.894 52.381 0.00 0.00 0.00 3.85
262 263 2.385803 AGTACGGTAAGGGACATGGAG 58.614 52.381 0.00 0.00 0.00 3.86
263 264 2.537633 AGTACGGTAAGGGACATGGA 57.462 50.000 0.00 0.00 0.00 3.41
264 265 4.081531 TGTTAAGTACGGTAAGGGACATGG 60.082 45.833 0.00 0.00 0.00 3.66
265 266 5.075858 TGTTAAGTACGGTAAGGGACATG 57.924 43.478 0.00 0.00 0.00 3.21
266 267 5.743636 TTGTTAAGTACGGTAAGGGACAT 57.256 39.130 0.00 0.00 0.00 3.06
267 268 5.245751 TCATTGTTAAGTACGGTAAGGGACA 59.754 40.000 0.00 0.00 0.00 4.02
268 269 5.723295 TCATTGTTAAGTACGGTAAGGGAC 58.277 41.667 0.00 0.00 0.00 4.46
269 270 5.999205 TCATTGTTAAGTACGGTAAGGGA 57.001 39.130 0.00 0.00 0.00 4.20
270 271 6.342906 TCATCATTGTTAAGTACGGTAAGGG 58.657 40.000 0.00 0.00 0.00 3.95
271 272 7.039882 ACTCATCATTGTTAAGTACGGTAAGG 58.960 38.462 0.00 0.00 0.00 2.69
272 273 9.234384 CTACTCATCATTGTTAAGTACGGTAAG 57.766 37.037 0.00 0.00 0.00 2.34
313 314 5.640357 GGCGGATTTGTCGTCCATTATATTA 59.360 40.000 0.00 0.00 35.41 0.98
320 521 0.744414 CTGGCGGATTTGTCGTCCAT 60.744 55.000 0.00 0.00 35.41 3.41
493 711 2.280119 ACGCACACATCACGCTGT 60.280 55.556 0.00 0.00 0.00 4.40
799 1021 2.967615 GGTAGCAAGATCGGCGGC 60.968 66.667 7.21 0.00 36.08 6.53
800 1022 1.883084 GTGGTAGCAAGATCGGCGG 60.883 63.158 7.21 0.00 36.08 6.13
801 1023 0.872021 GAGTGGTAGCAAGATCGGCG 60.872 60.000 0.00 0.00 36.08 6.46
899 1121 3.196685 ACCACTCTAAATCTCAGCTGACC 59.803 47.826 13.74 0.00 0.00 4.02
1056 1278 0.389817 CGACATCGACATGGTGGTGT 60.390 55.000 5.17 5.17 43.02 4.16
1088 1310 2.675423 CGTCCTCCTCCACGGTGA 60.675 66.667 10.28 0.00 32.19 4.02
1284 1506 2.569354 GCCATGGTGGGTTTCGCAA 61.569 57.895 14.67 0.00 38.19 4.85
1322 1544 0.320073 TGCTGGTAGTTCCGTTTCCG 60.320 55.000 0.00 0.00 39.52 4.30
1338 1560 0.106819 GTTCCATGCCCATCTCTGCT 60.107 55.000 0.00 0.00 0.00 4.24
1415 1640 0.865639 GTTGTTGTCGTTGTGCTGCC 60.866 55.000 0.00 0.00 0.00 4.85
1434 1674 3.305110 GCCCACGTTGTTATTGTTCTTG 58.695 45.455 0.00 0.00 0.00 3.02
1435 1675 2.031508 CGCCCACGTTGTTATTGTTCTT 60.032 45.455 0.00 0.00 33.53 2.52
1436 1676 1.533731 CGCCCACGTTGTTATTGTTCT 59.466 47.619 0.00 0.00 33.53 3.01
1497 1737 1.080705 GTTCTCAGACCCGACCACG 60.081 63.158 0.00 0.00 39.43 4.94
1499 1739 1.816863 GCTGTTCTCAGACCCGACCA 61.817 60.000 0.00 0.00 43.76 4.02
1730 1978 1.869767 GATGTGCAGATCGATTGGACC 59.130 52.381 20.62 9.50 36.22 4.46
1774 2022 3.678056 ATGTCAGAGTTTACGCCAGAA 57.322 42.857 0.00 0.00 0.00 3.02
1824 2072 3.231889 CTGGTGCCTGCTGACTCGT 62.232 63.158 0.00 0.00 0.00 4.18
1839 2087 1.480137 GGGTCAGTCAGTCAGATCTGG 59.520 57.143 22.42 6.99 36.25 3.86
1847 2095 1.545706 GGGTCCTGGGTCAGTCAGTC 61.546 65.000 0.00 0.00 0.00 3.51
1848 2096 1.536662 GGGTCCTGGGTCAGTCAGT 60.537 63.158 0.00 0.00 0.00 3.41
1849 2097 1.127567 TTGGGTCCTGGGTCAGTCAG 61.128 60.000 0.00 0.00 0.00 3.51
1850 2098 1.074090 TTGGGTCCTGGGTCAGTCA 60.074 57.895 0.00 0.00 0.00 3.41
1970 2218 1.531739 GCTAGCTAGCTCCTCGCCAT 61.532 60.000 33.71 0.00 45.62 4.40
1972 2220 2.648454 GCTAGCTAGCTCCTCGCC 59.352 66.667 33.71 6.73 45.62 5.54
2019 2271 2.738521 CGTACCAACGCAGCAGCT 60.739 61.111 0.00 0.00 43.12 4.24
2030 2282 5.927689 CCAACTTTCAACTATGTACGTACCA 59.072 40.000 22.43 11.24 0.00 3.25
2040 2292 7.888021 TGATGATGTTACCCAACTTTCAACTAT 59.112 33.333 0.00 0.00 33.89 2.12
2087 2345 0.958091 CATTTCGGTGCAAACCTCCA 59.042 50.000 0.00 0.00 0.00 3.86
2152 2410 2.255252 CGTCCCAAAAAGCTGCCG 59.745 61.111 0.00 0.00 0.00 5.69
2174 2432 4.011023 CGATTGAGATCTATCCTACCCGT 58.989 47.826 0.00 0.00 0.00 5.28
2178 2436 3.181495 CGGCCGATTGAGATCTATCCTAC 60.181 52.174 24.07 0.00 0.00 3.18
2259 2517 2.917933 ACACTGTTTGCTGTTGCTCTA 58.082 42.857 0.00 0.00 40.48 2.43
2261 2519 2.603173 GCTACACTGTTTGCTGTTGCTC 60.603 50.000 1.73 0.00 36.56 4.26
2266 2524 4.184629 GCTATAGCTACACTGTTTGCTGT 58.815 43.478 17.75 12.54 37.02 4.40
2394 2652 4.017808 AGCAAGGTAACAGAGAGACGTAT 58.982 43.478 0.00 0.00 41.41 3.06
2418 2676 9.240734 GCTTGCTTACCCTAGAACTACTATATA 57.759 37.037 0.00 0.00 0.00 0.86
2419 2677 7.951245 AGCTTGCTTACCCTAGAACTACTATAT 59.049 37.037 0.00 0.00 0.00 0.86
2422 2680 5.516984 AGCTTGCTTACCCTAGAACTACTA 58.483 41.667 0.00 0.00 0.00 1.82
2423 2681 4.354662 AGCTTGCTTACCCTAGAACTACT 58.645 43.478 0.00 0.00 0.00 2.57
2424 2682 4.159879 TGAGCTTGCTTACCCTAGAACTAC 59.840 45.833 0.00 0.00 0.00 2.73
2464 2723 4.478206 TCAGAAGATTCAGGGCACTAAG 57.522 45.455 0.00 0.00 0.00 2.18
2498 2757 9.118236 GACACAAATTTATTAAGCAGAGAACAC 57.882 33.333 0.00 0.00 0.00 3.32
2505 2764 7.471721 TCATCCGACACAAATTTATTAAGCAG 58.528 34.615 0.00 0.00 0.00 4.24
2517 2776 6.513806 AATCAATGAATCATCCGACACAAA 57.486 33.333 0.00 0.00 0.00 2.83
2520 2779 7.919690 TCTTTAATCAATGAATCATCCGACAC 58.080 34.615 0.00 0.00 0.00 3.67
2523 2796 8.122330 CGTTTCTTTAATCAATGAATCATCCGA 58.878 33.333 0.00 0.00 30.47 4.55
2525 2798 9.787532 TTCGTTTCTTTAATCAATGAATCATCC 57.212 29.630 0.00 0.00 30.47 3.51
2527 2800 9.793252 CCTTCGTTTCTTTAATCAATGAATCAT 57.207 29.630 0.00 0.00 30.47 2.45
2549 2822 4.820716 CCACCTGAGATTCATTCATCCTTC 59.179 45.833 0.00 0.00 0.00 3.46
2552 2825 4.133078 GTCCACCTGAGATTCATTCATCC 58.867 47.826 0.00 0.00 0.00 3.51
2564 2837 2.262915 GCGTCCAGTCCACCTGAG 59.737 66.667 0.00 0.00 44.49 3.35
2565 2838 3.311110 GGCGTCCAGTCCACCTGA 61.311 66.667 0.00 0.00 44.49 3.86
2667 2940 1.513586 CGTGAGGCGGTACTCGTTC 60.514 63.158 5.79 5.14 40.39 3.95
2750 3023 4.497473 TGCGCTTTAGCAAAATTGTACT 57.503 36.364 9.73 0.00 45.06 2.73
2774 3047 9.881649 AGATGTGCAATACCTATAACATATCTG 57.118 33.333 0.00 0.00 35.51 2.90
2787 3060 9.929180 TGATATAAGACTTAGATGTGCAATACC 57.071 33.333 7.07 0.00 0.00 2.73
2798 3071 8.082852 GGCTGACGATTTGATATAAGACTTAGA 58.917 37.037 0.73 0.00 0.00 2.10
2799 3072 8.233692 GGCTGACGATTTGATATAAGACTTAG 57.766 38.462 0.73 0.00 0.00 2.18
2851 3128 4.767255 GCGCTAGCAGTGGCAGGT 62.767 66.667 16.45 0.00 44.61 4.00
2893 3177 0.901827 TGGATGGAGTGCATGTACGT 59.098 50.000 0.12 0.00 0.00 3.57
2894 3178 2.138320 GATGGATGGAGTGCATGTACG 58.862 52.381 0.12 0.00 39.19 3.67
2895 3179 3.397482 GAGATGGATGGAGTGCATGTAC 58.603 50.000 0.12 5.71 39.19 2.90
2896 3180 2.369860 GGAGATGGATGGAGTGCATGTA 59.630 50.000 0.12 0.00 39.19 2.29
3060 3431 9.835315 CGTAGCGATAATAATAATGCTGTAATG 57.165 33.333 0.00 0.00 34.08 1.90
3109 3480 2.863401 TATGCCGTACTGCTACAGTG 57.137 50.000 10.75 0.00 45.01 3.66
3110 3481 2.545952 GCATATGCCGTACTGCTACAGT 60.546 50.000 17.26 5.46 40.66 3.55
3111 3482 2.061773 GCATATGCCGTACTGCTACAG 58.938 52.381 17.26 0.00 34.53 2.74
3112 3483 1.410882 TGCATATGCCGTACTGCTACA 59.589 47.619 24.54 0.00 41.18 2.74
3233 3617 6.743110 TGTTTTGAATGAATGAATGAACGGA 58.257 32.000 0.00 0.00 0.00 4.69
3234 3618 7.405469 TTGTTTTGAATGAATGAATGAACGG 57.595 32.000 0.00 0.00 0.00 4.44
3249 3633 5.473846 TGGCGTACTGGATAATTGTTTTGAA 59.526 36.000 0.00 0.00 0.00 2.69
3250 3634 5.004448 TGGCGTACTGGATAATTGTTTTGA 58.996 37.500 0.00 0.00 0.00 2.69
3255 3639 2.878406 GCATGGCGTACTGGATAATTGT 59.122 45.455 0.00 0.00 0.00 2.71
3256 3640 3.141398 AGCATGGCGTACTGGATAATTG 58.859 45.455 0.00 0.00 0.00 2.32
3331 3719 3.195698 GCTTACCTTGGCGCCTCG 61.196 66.667 29.70 17.98 0.00 4.63
3559 3964 1.937191 TGCGAGGATATGGCCATCTA 58.063 50.000 24.80 5.96 0.00 1.98
3680 4085 9.341078 GGTATTCCCTCCGTAAACAAATATAAA 57.659 33.333 0.00 0.00 0.00 1.40
3761 4167 2.028420 TCTCAGTTCGCCATCCAATG 57.972 50.000 0.00 0.00 0.00 2.82
3765 4171 1.064654 GCAATTCTCAGTTCGCCATCC 59.935 52.381 0.00 0.00 0.00 3.51
3766 4172 1.739466 TGCAATTCTCAGTTCGCCATC 59.261 47.619 0.00 0.00 0.00 3.51
3767 4173 1.825090 TGCAATTCTCAGTTCGCCAT 58.175 45.000 0.00 0.00 0.00 4.40
3768 4174 1.825090 ATGCAATTCTCAGTTCGCCA 58.175 45.000 0.00 0.00 0.00 5.69
3769 4175 2.523015 CAATGCAATTCTCAGTTCGCC 58.477 47.619 0.00 0.00 31.22 5.54
3770 4176 1.916000 GCAATGCAATTCTCAGTTCGC 59.084 47.619 0.00 0.00 31.22 4.70
3771 4177 3.482722 AGCAATGCAATTCTCAGTTCG 57.517 42.857 8.35 0.00 31.22 3.95
3819 4289 6.828785 AGTTGGACTATCACAATTAATCCACC 59.171 38.462 0.00 0.00 34.55 4.61
3877 4347 5.333111 CGTGTTTGGTCTGTTAGCTAAACTC 60.333 44.000 7.99 2.48 38.99 3.01
3935 4405 5.125356 TGCCATGTTTACAGGATCATACAG 58.875 41.667 0.00 0.00 0.00 2.74
4094 4564 8.485392 CAATAAACACTCCATTTTTCCCCATAT 58.515 33.333 0.00 0.00 0.00 1.78
4113 4583 7.631717 ACTAGGAATTTCTCAGCCAATAAAC 57.368 36.000 0.00 0.00 0.00 2.01
4321 4955 9.927081 AAGATCCTATCCTATGAACAAAATGTT 57.073 29.630 0.00 0.00 44.37 2.71
4337 4971 7.228308 CCTGGACTCAATGAAAAAGATCCTATC 59.772 40.741 0.00 0.00 0.00 2.08
4380 5014 8.619546 GGAACCAATCATTTCACATTTCAAAAA 58.380 29.630 0.00 0.00 0.00 1.94
4381 5015 7.992033 AGGAACCAATCATTTCACATTTCAAAA 59.008 29.630 0.00 0.00 0.00 2.44
4473 5107 7.873739 AGATGTTTTTGCAAGCTAACATAAC 57.126 32.000 24.36 17.47 40.29 1.89
4477 5111 6.800543 TGTAAGATGTTTTTGCAAGCTAACA 58.199 32.000 19.42 19.42 35.25 2.41
4592 5226 4.072839 GTGCTACTTTAAGCCTCCTTTGT 58.927 43.478 0.00 0.00 42.05 2.83
4635 5273 2.756760 ACAAGCCACACATCATGGAATC 59.243 45.455 0.00 0.00 39.87 2.52
4670 5308 0.764369 ACAAGCCACACTCCCTCAGA 60.764 55.000 0.00 0.00 0.00 3.27
4671 5309 0.109342 AACAAGCCACACTCCCTCAG 59.891 55.000 0.00 0.00 0.00 3.35
4762 5402 3.974401 CGCAACCACATTAACTTTGAGTG 59.026 43.478 0.00 0.00 0.00 3.51
4777 5417 2.428890 ACTTCCATTTGAAACGCAACCA 59.571 40.909 0.00 0.00 35.91 3.67
4792 5432 4.277174 ACATGTCAAACGCATTAACTTCCA 59.723 37.500 0.00 0.00 0.00 3.53
4793 5433 4.794169 ACATGTCAAACGCATTAACTTCC 58.206 39.130 0.00 0.00 0.00 3.46
4797 5437 4.403453 GAGGACATGTCAAACGCATTAAC 58.597 43.478 26.47 5.30 0.00 2.01
4809 5449 0.320771 ACTTGCACGGAGGACATGTC 60.321 55.000 17.91 17.91 0.00 3.06
5054 5700 3.505790 ATGGCCCCAAACGTGCAGA 62.506 57.895 0.00 0.00 0.00 4.26
5174 5820 1.823295 CCAGTAGACGGGGTCCATG 59.177 63.158 0.00 0.00 32.18 3.66
5175 5821 2.064581 GCCAGTAGACGGGGTCCAT 61.065 63.158 0.91 0.00 32.18 3.41
5215 5861 0.175760 GGAGACGGAGCAATGTAGCA 59.824 55.000 0.00 0.00 36.85 3.49
5230 5879 1.306970 GGGAAGAGGGAGACGGAGA 59.693 63.158 0.00 0.00 0.00 3.71
5234 5883 3.839432 GGCGGGAAGAGGGAGACG 61.839 72.222 0.00 0.00 0.00 4.18
5251 5900 3.305398 AAGAGCCTTAGTCACGTGAAG 57.695 47.619 21.95 14.26 0.00 3.02
5264 5913 1.690352 ACATGCAAAGCAAAAGAGCCT 59.310 42.857 0.00 0.00 43.62 4.58
5315 5965 4.315803 CTGAGTGAGGACAAACGGTAAAT 58.684 43.478 0.00 0.00 0.00 1.40
5316 5966 3.493699 CCTGAGTGAGGACAAACGGTAAA 60.494 47.826 0.00 0.00 46.33 2.01
5326 5976 2.125753 CGCAGCCTGAGTGAGGAC 60.126 66.667 0.00 0.00 46.33 3.85
5332 5983 0.392193 CATTTCCTCGCAGCCTGAGT 60.392 55.000 0.00 0.00 0.00 3.41
5401 6052 8.648693 ACTAGCTAGTACTTTAATTACCATGGG 58.351 37.037 24.97 0.00 34.13 4.00
5457 6109 1.882912 CTACCACAGCTGCTTCAACA 58.117 50.000 15.27 0.00 0.00 3.33
5544 6216 0.535780 CTGTACATGGGATGCGGCAT 60.536 55.000 16.65 16.65 0.00 4.40
5555 6227 1.300931 CGGGATCGGCCTGTACATG 60.301 63.158 0.00 0.00 38.31 3.21
5719 6555 5.535753 TCAATCGATATCTCTGCTTTGGA 57.464 39.130 0.00 0.00 0.00 3.53
5720 6556 6.798315 AATCAATCGATATCTCTGCTTTGG 57.202 37.500 0.00 0.00 0.00 3.28
5725 6561 9.552114 CCAAAAATAATCAATCGATATCTCTGC 57.448 33.333 0.00 0.00 0.00 4.26
5747 6583 8.093927 GGGAATTGAACACAAAGATTATCCAAA 58.906 33.333 0.00 0.00 0.00 3.28
5750 6586 6.265577 CGGGAATTGAACACAAAGATTATCC 58.734 40.000 0.00 0.00 0.00 2.59
5752 6588 5.418840 AGCGGGAATTGAACACAAAGATTAT 59.581 36.000 0.00 0.00 0.00 1.28
5753 6589 4.764823 AGCGGGAATTGAACACAAAGATTA 59.235 37.500 0.00 0.00 0.00 1.75
5755 6591 3.157087 AGCGGGAATTGAACACAAAGAT 58.843 40.909 0.00 0.00 0.00 2.40
5756 6592 2.582052 AGCGGGAATTGAACACAAAGA 58.418 42.857 0.00 0.00 0.00 2.52
5757 6593 4.701956 ATAGCGGGAATTGAACACAAAG 57.298 40.909 0.00 0.00 0.00 2.77
5783 6644 9.088987 ACAAAAATCAGGAACCACAAGTAATAT 57.911 29.630 0.00 0.00 0.00 1.28
5785 6646 7.360113 ACAAAAATCAGGAACCACAAGTAAT 57.640 32.000 0.00 0.00 0.00 1.89
5792 6653 3.555547 GTGCAACAAAAATCAGGAACCAC 59.444 43.478 0.00 0.00 36.32 4.16
5798 6663 1.850377 TGCGTGCAACAAAAATCAGG 58.150 45.000 0.00 0.00 35.74 3.86
5827 6692 3.464907 CTCTCCTTGGACTGCATACATG 58.535 50.000 0.00 0.00 0.00 3.21
6065 6935 1.001406 GTTGTGTCACCCAGAGAGAGG 59.999 57.143 0.00 0.00 0.00 3.69
6066 6936 1.967066 AGTTGTGTCACCCAGAGAGAG 59.033 52.381 0.00 0.00 0.00 3.20
6141 7011 1.153978 GCGTACATCGACCGACCAA 60.154 57.895 0.00 0.00 42.86 3.67
6142 7012 2.486504 GCGTACATCGACCGACCA 59.513 61.111 0.00 0.00 42.86 4.02
6204 7074 8.579006 CCCAGGACAGTACGTACATTATTATTA 58.421 37.037 26.55 0.00 0.00 0.98
6205 7075 7.070322 ACCCAGGACAGTACGTACATTATTATT 59.930 37.037 26.55 1.16 0.00 1.40
6206 7076 6.552350 ACCCAGGACAGTACGTACATTATTAT 59.448 38.462 26.55 1.93 0.00 1.28
6207 7077 5.893255 ACCCAGGACAGTACGTACATTATTA 59.107 40.000 26.55 0.00 0.00 0.98
6208 7078 4.713321 ACCCAGGACAGTACGTACATTATT 59.287 41.667 26.55 3.46 0.00 1.40
6209 7079 4.098960 CACCCAGGACAGTACGTACATTAT 59.901 45.833 26.55 9.36 0.00 1.28
6210 7080 3.444742 CACCCAGGACAGTACGTACATTA 59.555 47.826 26.55 0.00 0.00 1.90
6211 7081 2.232941 CACCCAGGACAGTACGTACATT 59.767 50.000 26.55 13.20 0.00 2.71
6212 7082 1.822990 CACCCAGGACAGTACGTACAT 59.177 52.381 26.55 14.74 0.00 2.29
6213 7083 1.250328 CACCCAGGACAGTACGTACA 58.750 55.000 26.55 0.00 0.00 2.90
6214 7084 1.068055 CACACCCAGGACAGTACGTAC 60.068 57.143 18.10 18.10 0.00 3.67
6215 7085 1.250328 CACACCCAGGACAGTACGTA 58.750 55.000 0.00 0.00 0.00 3.57
6216 7086 0.757935 ACACACCCAGGACAGTACGT 60.758 55.000 0.00 0.00 0.00 3.57
6217 7087 0.038526 GACACACCCAGGACAGTACG 60.039 60.000 0.00 0.00 0.00 3.67
6351 7222 6.507023 CATCCTTGGTTATTCATTTACCAGC 58.493 40.000 0.00 0.00 42.48 4.85
6378 7249 1.307355 TTCCACACGGAGCATGCATG 61.307 55.000 22.70 22.70 44.10 4.06
6379 7250 0.608856 TTTCCACACGGAGCATGCAT 60.609 50.000 21.98 4.75 44.10 3.96
6420 7291 5.220835 CGCAGAAATATGCAAGTGTGGAATA 60.221 40.000 0.00 0.00 46.87 1.75
6435 7306 6.552859 TGTTTCTCACATTTCGCAGAAATA 57.447 33.333 13.56 1.53 45.90 1.40
6458 7329 9.621629 TCCCATATTTGTCGTGTTAATAAAGAT 57.378 29.630 0.00 0.00 0.00 2.40
6481 7358 4.579869 TGCAGATAAAGAGTTTCTGTCCC 58.420 43.478 0.00 0.00 39.24 4.46
6495 7372 4.885413 AGCTTGTTTTTGCATGCAGATAA 58.115 34.783 21.50 9.98 40.58 1.75
6531 7408 9.399797 TGATATCATCATTTGAGCTAACAACTT 57.600 29.630 0.00 0.00 37.89 2.66
6532 7409 8.969260 TGATATCATCATTTGAGCTAACAACT 57.031 30.769 0.00 0.00 37.89 3.16
6538 7415 9.563748 TCACATTTGATATCATCATTTGAGCTA 57.436 29.630 6.17 0.00 39.39 3.32
6539 7416 8.459911 TCACATTTGATATCATCATTTGAGCT 57.540 30.769 6.17 0.00 39.39 4.09
6540 7417 9.524106 TTTCACATTTGATATCATCATTTGAGC 57.476 29.630 6.17 0.00 39.39 4.26
6619 7500 5.756347 TGTGCTTACTAGTCACATTTTTCGT 59.244 36.000 10.87 0.00 35.19 3.85
6660 7542 3.591023 TGTGGCATGCATCTTGAATTTG 58.409 40.909 21.36 0.00 0.00 2.32
6661 7543 3.965379 TGTGGCATGCATCTTGAATTT 57.035 38.095 21.36 0.00 0.00 1.82
6664 7546 3.965379 ATTTGTGGCATGCATCTTGAA 57.035 38.095 21.36 6.48 0.00 2.69
6666 7548 6.321848 TCTATATTTGTGGCATGCATCTTG 57.678 37.500 21.36 0.00 0.00 3.02
6667 7549 6.516194 GCTTCTATATTTGTGGCATGCATCTT 60.516 38.462 21.36 1.15 0.00 2.40
6669 7551 5.048224 AGCTTCTATATTTGTGGCATGCATC 60.048 40.000 21.36 12.03 0.00 3.91
6670 7552 4.831155 AGCTTCTATATTTGTGGCATGCAT 59.169 37.500 21.36 6.35 0.00 3.96
6671 7553 4.209538 AGCTTCTATATTTGTGGCATGCA 58.790 39.130 21.36 2.54 0.00 3.96
6672 7554 4.518211 AGAGCTTCTATATTTGTGGCATGC 59.482 41.667 9.90 9.90 0.00 4.06
6673 7555 5.562307 GCAGAGCTTCTATATTTGTGGCATG 60.562 44.000 0.00 0.00 0.00 4.06
6678 7560 6.482641 ACAGATGCAGAGCTTCTATATTTGTG 59.517 38.462 7.02 0.00 40.30 3.33
6799 7707 2.156098 GTCTCCTAGACTAGATGGCGG 58.844 57.143 11.27 0.00 41.88 6.13
6853 7761 9.489084 GAAAATGGTAAATCTTTTGCCTAGTTT 57.511 29.630 8.28 6.65 0.00 2.66
6854 7762 8.646900 TGAAAATGGTAAATCTTTTGCCTAGTT 58.353 29.630 8.28 0.93 0.00 2.24
6855 7763 8.189119 TGAAAATGGTAAATCTTTTGCCTAGT 57.811 30.769 8.28 0.00 0.00 2.57
6856 7764 9.657419 AATGAAAATGGTAAATCTTTTGCCTAG 57.343 29.630 8.28 0.00 0.00 3.02
6857 7765 9.434420 CAATGAAAATGGTAAATCTTTTGCCTA 57.566 29.630 8.28 0.00 0.00 3.93
6858 7766 8.156165 TCAATGAAAATGGTAAATCTTTTGCCT 58.844 29.630 8.28 0.00 0.00 4.75
6859 7767 8.321650 TCAATGAAAATGGTAAATCTTTTGCC 57.678 30.769 0.73 0.73 0.00 4.52
6871 7779 9.525826 ACTTCTCTCTTAATCAATGAAAATGGT 57.474 29.630 0.00 0.00 0.00 3.55
6886 7794 8.312564 GCCTTAACCTCTAAAACTTCTCTCTTA 58.687 37.037 0.00 0.00 0.00 2.10
6887 7795 7.162761 GCCTTAACCTCTAAAACTTCTCTCTT 58.837 38.462 0.00 0.00 0.00 2.85
6888 7796 6.295973 GGCCTTAACCTCTAAAACTTCTCTCT 60.296 42.308 0.00 0.00 0.00 3.10
6889 7797 5.875910 GGCCTTAACCTCTAAAACTTCTCTC 59.124 44.000 0.00 0.00 0.00 3.20
6890 7798 5.309806 TGGCCTTAACCTCTAAAACTTCTCT 59.690 40.000 3.32 0.00 0.00 3.10
6891 7799 5.557866 TGGCCTTAACCTCTAAAACTTCTC 58.442 41.667 3.32 0.00 0.00 2.87
6892 7800 5.578157 TGGCCTTAACCTCTAAAACTTCT 57.422 39.130 3.32 0.00 0.00 2.85
6893 7801 6.294564 CCTTTGGCCTTAACCTCTAAAACTTC 60.295 42.308 3.32 0.00 0.00 3.01
6894 7802 5.538813 CCTTTGGCCTTAACCTCTAAAACTT 59.461 40.000 3.32 0.00 0.00 2.66
6895 7803 5.077564 CCTTTGGCCTTAACCTCTAAAACT 58.922 41.667 3.32 0.00 0.00 2.66
6896 7804 4.321750 GCCTTTGGCCTTAACCTCTAAAAC 60.322 45.833 3.32 0.00 44.06 2.43
6897 7805 3.830178 GCCTTTGGCCTTAACCTCTAAAA 59.170 43.478 3.32 0.00 44.06 1.52
6898 7806 3.427573 GCCTTTGGCCTTAACCTCTAAA 58.572 45.455 3.32 0.00 44.06 1.85
6899 7807 3.081710 GCCTTTGGCCTTAACCTCTAA 57.918 47.619 3.32 0.00 44.06 2.10
6900 7808 2.801077 GCCTTTGGCCTTAACCTCTA 57.199 50.000 3.32 0.00 44.06 2.43
6901 7809 3.672066 GCCTTTGGCCTTAACCTCT 57.328 52.632 3.32 0.00 44.06 3.69
6912 7820 3.651803 TTGTTGTAATTCGGCCTTTGG 57.348 42.857 0.00 0.00 0.00 3.28
6913 7821 4.621034 GTGATTGTTGTAATTCGGCCTTTG 59.379 41.667 0.00 0.00 0.00 2.77
6914 7822 4.522789 AGTGATTGTTGTAATTCGGCCTTT 59.477 37.500 0.00 0.00 0.00 3.11
6915 7823 4.079253 AGTGATTGTTGTAATTCGGCCTT 58.921 39.130 0.00 0.00 0.00 4.35
6916 7824 3.686016 AGTGATTGTTGTAATTCGGCCT 58.314 40.909 0.00 0.00 0.00 5.19
6917 7825 3.689649 AGAGTGATTGTTGTAATTCGGCC 59.310 43.478 0.00 0.00 0.00 6.13
6918 7826 4.391830 TGAGAGTGATTGTTGTAATTCGGC 59.608 41.667 0.00 0.00 0.00 5.54
6919 7827 6.238211 GGATGAGAGTGATTGTTGTAATTCGG 60.238 42.308 0.00 0.00 0.00 4.30
6920 7828 6.313658 TGGATGAGAGTGATTGTTGTAATTCG 59.686 38.462 0.00 0.00 0.00 3.34
6921 7829 7.615582 TGGATGAGAGTGATTGTTGTAATTC 57.384 36.000 0.00 0.00 0.00 2.17
6922 7830 7.830697 TGATGGATGAGAGTGATTGTTGTAATT 59.169 33.333 0.00 0.00 0.00 1.40
6923 7831 7.341030 TGATGGATGAGAGTGATTGTTGTAAT 58.659 34.615 0.00 0.00 0.00 1.89
6924 7832 6.710278 TGATGGATGAGAGTGATTGTTGTAA 58.290 36.000 0.00 0.00 0.00 2.41
6925 7833 6.298441 TGATGGATGAGAGTGATTGTTGTA 57.702 37.500 0.00 0.00 0.00 2.41
6926 7834 5.169992 TGATGGATGAGAGTGATTGTTGT 57.830 39.130 0.00 0.00 0.00 3.32
6927 7835 6.427242 CCTATGATGGATGAGAGTGATTGTTG 59.573 42.308 0.00 0.00 0.00 3.33
6928 7836 6.100859 ACCTATGATGGATGAGAGTGATTGTT 59.899 38.462 0.00 0.00 0.00 2.83
6929 7837 5.605908 ACCTATGATGGATGAGAGTGATTGT 59.394 40.000 0.00 0.00 0.00 2.71
6930 7838 5.932883 CACCTATGATGGATGAGAGTGATTG 59.067 44.000 0.00 0.00 0.00 2.67
6931 7839 5.512749 GCACCTATGATGGATGAGAGTGATT 60.513 44.000 0.00 0.00 0.00 2.57
6932 7840 4.020396 GCACCTATGATGGATGAGAGTGAT 60.020 45.833 0.00 0.00 0.00 3.06
6933 7841 3.323115 GCACCTATGATGGATGAGAGTGA 59.677 47.826 0.00 0.00 0.00 3.41
6934 7842 3.324268 AGCACCTATGATGGATGAGAGTG 59.676 47.826 0.00 0.00 0.00 3.51
6935 7843 3.324268 CAGCACCTATGATGGATGAGAGT 59.676 47.826 0.00 0.00 38.63 3.24
6936 7844 3.927854 CAGCACCTATGATGGATGAGAG 58.072 50.000 0.00 0.00 38.63 3.20
6944 7852 3.504906 CCTTTATGCCAGCACCTATGATG 59.495 47.826 0.00 0.00 42.12 3.07
6945 7853 3.759581 CCTTTATGCCAGCACCTATGAT 58.240 45.455 0.00 0.00 0.00 2.45
6946 7854 2.749466 GCCTTTATGCCAGCACCTATGA 60.749 50.000 0.00 0.00 0.00 2.15
6947 7855 1.610522 GCCTTTATGCCAGCACCTATG 59.389 52.381 0.00 0.00 0.00 2.23
6948 7856 1.815408 CGCCTTTATGCCAGCACCTAT 60.815 52.381 0.00 0.00 0.00 2.57
6949 7857 0.463654 CGCCTTTATGCCAGCACCTA 60.464 55.000 0.00 0.00 0.00 3.08
6950 7858 1.750399 CGCCTTTATGCCAGCACCT 60.750 57.895 0.00 0.00 0.00 4.00
6951 7859 1.595093 AACGCCTTTATGCCAGCACC 61.595 55.000 0.00 0.00 0.00 5.01
6952 7860 0.179163 GAACGCCTTTATGCCAGCAC 60.179 55.000 0.00 0.00 0.00 4.40
6953 7861 0.607762 TGAACGCCTTTATGCCAGCA 60.608 50.000 0.00 0.00 0.00 4.41
6954 7862 0.740737 ATGAACGCCTTTATGCCAGC 59.259 50.000 0.00 0.00 0.00 4.85
6955 7863 3.466836 TCTATGAACGCCTTTATGCCAG 58.533 45.455 0.00 0.00 0.00 4.85
6956 7864 3.133901 TCTCTATGAACGCCTTTATGCCA 59.866 43.478 0.00 0.00 0.00 4.92
6957 7865 3.728845 TCTCTATGAACGCCTTTATGCC 58.271 45.455 0.00 0.00 0.00 4.40
6958 7866 5.931441 ATTCTCTATGAACGCCTTTATGC 57.069 39.130 0.00 0.00 37.52 3.14
6959 7867 8.276325 GTGTTATTCTCTATGAACGCCTTTATG 58.724 37.037 0.00 0.00 37.52 1.90
6960 7868 7.985184 TGTGTTATTCTCTATGAACGCCTTTAT 59.015 33.333 0.00 0.00 37.52 1.40
6961 7869 7.324935 TGTGTTATTCTCTATGAACGCCTTTA 58.675 34.615 0.00 0.00 37.52 1.85
6962 7870 6.170506 TGTGTTATTCTCTATGAACGCCTTT 58.829 36.000 0.00 0.00 37.52 3.11
6963 7871 5.730550 TGTGTTATTCTCTATGAACGCCTT 58.269 37.500 0.00 0.00 37.52 4.35
6964 7872 5.105310 ACTGTGTTATTCTCTATGAACGCCT 60.105 40.000 0.00 0.00 37.52 5.52
6965 7873 5.109903 ACTGTGTTATTCTCTATGAACGCC 58.890 41.667 0.00 0.00 37.52 5.68
6966 7874 6.750501 TGTACTGTGTTATTCTCTATGAACGC 59.249 38.462 0.00 0.00 37.52 4.84
6967 7875 8.858003 ATGTACTGTGTTATTCTCTATGAACG 57.142 34.615 0.00 0.00 37.52 3.95
6974 7882 9.682465 TCTGTAGTATGTACTGTGTTATTCTCT 57.318 33.333 3.00 0.00 37.10 3.10
6975 7883 9.719279 GTCTGTAGTATGTACTGTGTTATTCTC 57.281 37.037 3.00 0.00 37.10 2.87
6976 7884 9.463902 AGTCTGTAGTATGTACTGTGTTATTCT 57.536 33.333 3.00 0.00 37.10 2.40
6981 7889 9.688592 GTAAAAGTCTGTAGTATGTACTGTGTT 57.311 33.333 3.00 0.00 37.10 3.32
6982 7890 8.853126 TGTAAAAGTCTGTAGTATGTACTGTGT 58.147 33.333 3.00 0.00 37.10 3.72


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.