Multiple sequence alignment - TraesCS3B01G186100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G186100 chr3B 100.000 3977 0 0 1 3977 201497059 201501035 0.000000e+00 7345.0
1 TraesCS3B01G186100 chr3B 97.472 989 18 3 1837 2825 544899265 544900246 0.000000e+00 1681.0
2 TraesCS3B01G186100 chr3B 100.000 52 0 0 1734 1785 240800175 240800226 3.270000e-16 97.1
3 TraesCS3B01G186100 chr2D 98.795 1743 17 4 1 1740 628292454 628290713 0.000000e+00 3099.0
4 TraesCS3B01G186100 chr2D 98.054 1747 26 3 1 1740 643857399 643859144 0.000000e+00 3031.0
5 TraesCS3B01G186100 chr2D 98.505 1538 17 2 1733 3269 643858594 643860126 0.000000e+00 2708.0
6 TraesCS3B01G186100 chr2D 99.507 1420 6 1 1733 3152 628291263 628289845 0.000000e+00 2582.0
7 TraesCS3B01G186100 chr2D 97.426 1088 21 3 1 1083 359630838 359629753 0.000000e+00 1847.0
8 TraesCS3B01G186100 chr2D 98.909 275 2 1 3703 3977 643860300 643860573 1.280000e-134 490.0
9 TraesCS3B01G186100 chr1D 95.600 1909 68 6 1733 3632 244392644 244394545 0.000000e+00 3046.0
10 TraesCS3B01G186100 chr1D 97.195 1747 41 4 1 1740 254481035 254482780 0.000000e+00 2948.0
11 TraesCS3B01G186100 chr1D 97.828 1519 25 4 1733 3250 254482230 254483741 0.000000e+00 2615.0
12 TraesCS3B01G186100 chr1D 96.356 933 32 2 808 1740 244392264 244393194 0.000000e+00 1533.0
13 TraesCS3B01G186100 chr1D 98.545 275 3 1 3703 3977 254483926 254484199 5.980000e-133 484.0
14 TraesCS3B01G186100 chr5D 97.826 1748 30 3 1 1740 483803720 483801973 0.000000e+00 3011.0
15 TraesCS3B01G186100 chr5D 96.909 1747 36 5 1 1740 6220133 6218398 0.000000e+00 2911.0
16 TraesCS3B01G186100 chr5D 98.430 1529 16 3 1733 3258 483802523 483801000 0.000000e+00 2684.0
17 TraesCS3B01G186100 chr5D 98.179 1538 20 4 1733 3269 6218948 6217418 0.000000e+00 2678.0
18 TraesCS3B01G186100 chr5D 99.273 275 2 0 3703 3977 6217243 6216969 7.680000e-137 497.0
19 TraesCS3B01G186100 chr1A 98.256 1663 28 1 79 1740 554474457 554472795 0.000000e+00 2909.0
20 TraesCS3B01G186100 chr1A 99.000 1600 15 1 1733 3332 554473345 554471747 0.000000e+00 2865.0
21 TraesCS3B01G186100 chr1A 98.573 911 10 2 3069 3977 554471482 554470573 0.000000e+00 1607.0
22 TraesCS3B01G186100 chr3A 95.900 1561 41 8 2170 3715 393238698 393237146 0.000000e+00 2507.0
23 TraesCS3B01G186100 chr3A 98.211 950 13 3 3030 3977 593321850 593320903 0.000000e+00 1657.0
24 TraesCS3B01G186100 chr3A 99.112 901 7 1 2690 3590 435414845 435413946 0.000000e+00 1618.0
25 TraesCS3B01G186100 chr2B 97.870 1127 23 1 1 1126 474938907 474940033 0.000000e+00 1947.0
26 TraesCS3B01G186100 chr4A 95.669 1062 41 5 1 1057 309271974 309270913 0.000000e+00 1701.0
27 TraesCS3B01G186100 chr7D 99.104 893 8 0 1838 2730 17212096 17212988 0.000000e+00 1605.0
28 TraesCS3B01G186100 chr3D 98.592 639 9 0 950 1588 24155992 24155354 0.000000e+00 1131.0
29 TraesCS3B01G186100 chr6D 99.356 621 4 0 1120 1740 459928388 459929008 0.000000e+00 1125.0
30 TraesCS3B01G186100 chr6D 98.909 275 2 1 3703 3977 431396949 431396676 1.280000e-134 490.0
31 TraesCS3B01G186100 chr7B 98.301 471 6 2 3334 3803 300903252 300902783 0.000000e+00 824.0
32 TraesCS3B01G186100 chr7B 96.721 122 3 1 3594 3715 149444836 149444956 6.740000e-48 202.0
33 TraesCS3B01G186100 chr5B 95.894 414 14 2 3269 3682 559429704 559430114 0.000000e+00 667.0
34 TraesCS3B01G186100 chr4B 98.397 312 5 0 3313 3624 421404471 421404160 2.090000e-152 549.0
35 TraesCS3B01G186100 chr6A 98.071 311 6 0 3276 3586 495543357 495543047 3.500000e-150 542.0
36 TraesCS3B01G186100 chr6A 98.909 275 3 0 3703 3977 192823180 192823454 3.570000e-135 492.0
37 TraesCS3B01G186100 chrUn 99.273 275 2 0 3703 3977 443804158 443803884 7.680000e-137 497.0
38 TraesCS3B01G186100 chrUn 99.257 269 2 0 3709 3977 444441717 444441985 1.660000e-133 486.0
39 TraesCS3B01G186100 chr6B 98.182 275 4 1 3565 3838 204449447 204449173 2.780000e-131 479.0
40 TraesCS3B01G186100 chr5A 91.204 216 15 3 3496 3708 11090770 11090984 1.400000e-74 291.0
41 TraesCS3B01G186100 chr2A 96.703 91 3 0 1733 1823 506688447 506688357 6.880000e-33 152.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G186100 chr3B 201497059 201501035 3976 False 7345.000000 7345 100.000000 1 3977 1 chr3B.!!$F1 3976
1 TraesCS3B01G186100 chr3B 544899265 544900246 981 False 1681.000000 1681 97.472000 1837 2825 1 chr3B.!!$F3 988
2 TraesCS3B01G186100 chr2D 628289845 628292454 2609 True 2840.500000 3099 99.151000 1 3152 2 chr2D.!!$R2 3151
3 TraesCS3B01G186100 chr2D 643857399 643860573 3174 False 2076.333333 3031 98.489333 1 3977 3 chr2D.!!$F1 3976
4 TraesCS3B01G186100 chr2D 359629753 359630838 1085 True 1847.000000 1847 97.426000 1 1083 1 chr2D.!!$R1 1082
5 TraesCS3B01G186100 chr1D 244392264 244394545 2281 False 2289.500000 3046 95.978000 808 3632 2 chr1D.!!$F1 2824
6 TraesCS3B01G186100 chr1D 254481035 254484199 3164 False 2015.666667 2948 97.856000 1 3977 3 chr1D.!!$F2 3976
7 TraesCS3B01G186100 chr5D 483801000 483803720 2720 True 2847.500000 3011 98.128000 1 3258 2 chr5D.!!$R2 3257
8 TraesCS3B01G186100 chr5D 6216969 6220133 3164 True 2028.666667 2911 98.120333 1 3977 3 chr5D.!!$R1 3976
9 TraesCS3B01G186100 chr1A 554470573 554474457 3884 True 2460.333333 2909 98.609667 79 3977 3 chr1A.!!$R1 3898
10 TraesCS3B01G186100 chr3A 393237146 393238698 1552 True 2507.000000 2507 95.900000 2170 3715 1 chr3A.!!$R1 1545
11 TraesCS3B01G186100 chr3A 593320903 593321850 947 True 1657.000000 1657 98.211000 3030 3977 1 chr3A.!!$R3 947
12 TraesCS3B01G186100 chr3A 435413946 435414845 899 True 1618.000000 1618 99.112000 2690 3590 1 chr3A.!!$R2 900
13 TraesCS3B01G186100 chr2B 474938907 474940033 1126 False 1947.000000 1947 97.870000 1 1126 1 chr2B.!!$F1 1125
14 TraesCS3B01G186100 chr4A 309270913 309271974 1061 True 1701.000000 1701 95.669000 1 1057 1 chr4A.!!$R1 1056
15 TraesCS3B01G186100 chr7D 17212096 17212988 892 False 1605.000000 1605 99.104000 1838 2730 1 chr7D.!!$F1 892
16 TraesCS3B01G186100 chr3D 24155354 24155992 638 True 1131.000000 1131 98.592000 950 1588 1 chr3D.!!$R1 638
17 TraesCS3B01G186100 chr6D 459928388 459929008 620 False 1125.000000 1125 99.356000 1120 1740 1 chr6D.!!$F1 620

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
77 78 3.572255 GTCAGTGTCTCTTCTCTGGACTT 59.428 47.826 0.00 0.0 32.14 3.01 F
1453 2012 0.105964 AAAAACTTTCCAAGGCCCGC 59.894 50.000 0.00 0.0 0.00 6.13 F
1746 2305 0.036388 CTGCGGGTACATGGACAACT 60.036 55.000 10.99 0.0 0.00 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1727 2286 0.036388 AGTTGTCCATGTACCCGCAG 60.036 55.000 0.0 0.0 0.0 5.18 R
2794 3354 2.770164 AAAGCCACTCGATTAGCTGT 57.230 45.000 0.0 0.0 35.3 4.40 R
3461 4564 3.117550 TGCATTGTATGGCCCAGAATAGT 60.118 43.478 0.0 0.0 0.0 2.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 55 9.630098 CTCACAAGTCACATTAATTTGCTTATT 57.370 29.630 9.46 0.00 0.00 1.40
67 68 7.516198 AATTTGCTTATTGTCAGTGTCTCTT 57.484 32.000 0.00 0.00 0.00 2.85
77 78 3.572255 GTCAGTGTCTCTTCTCTGGACTT 59.428 47.826 0.00 0.00 32.14 3.01
439 445 5.858581 CCGTTGGAAAGTTCAATCAATCTTC 59.141 40.000 0.00 0.00 0.00 2.87
800 811 6.663953 TCCTATAGGATAGAACATACACAGGC 59.336 42.308 18.00 0.00 39.78 4.85
956 972 7.470981 CGCCTAATTAACATTGAGTAGACCCTA 60.471 40.741 0.00 0.00 0.00 3.53
1118 1134 4.874966 GGATACTGATATCTTGGCAGCATC 59.125 45.833 3.98 0.00 37.85 3.91
1136 1152 0.331954 TCCCGAGTAAGTCCTCAGCT 59.668 55.000 0.00 0.00 0.00 4.24
1204 1763 6.250711 TCTTCTACTGGTACATGGACAACTA 58.749 40.000 10.99 0.00 38.20 2.24
1337 1896 2.910977 ACCTATTTGAAGAGGGTTCCGT 59.089 45.455 9.06 0.00 41.69 4.69
1338 1897 3.329814 ACCTATTTGAAGAGGGTTCCGTT 59.670 43.478 9.06 0.00 41.69 4.44
1339 1898 4.533311 ACCTATTTGAAGAGGGTTCCGTTA 59.467 41.667 9.06 0.00 41.69 3.18
1340 1899 4.874396 CCTATTTGAAGAGGGTTCCGTTAC 59.126 45.833 0.00 0.00 33.77 2.50
1341 1900 4.635699 ATTTGAAGAGGGTTCCGTTACT 57.364 40.909 0.00 0.00 0.00 2.24
1342 1901 5.750352 ATTTGAAGAGGGTTCCGTTACTA 57.250 39.130 0.00 0.00 0.00 1.82
1343 1902 5.549742 TTTGAAGAGGGTTCCGTTACTAA 57.450 39.130 0.00 0.00 0.00 2.24
1344 1903 4.525912 TGAAGAGGGTTCCGTTACTAAC 57.474 45.455 0.00 0.00 0.00 2.34
1345 1904 3.896888 TGAAGAGGGTTCCGTTACTAACA 59.103 43.478 0.00 0.00 0.00 2.41
1346 1905 4.529377 TGAAGAGGGTTCCGTTACTAACAT 59.471 41.667 0.00 0.00 0.00 2.71
1347 1906 4.467198 AGAGGGTTCCGTTACTAACATG 57.533 45.455 0.00 0.00 0.00 3.21
1348 1907 3.836562 AGAGGGTTCCGTTACTAACATGT 59.163 43.478 0.00 0.00 0.00 3.21
1349 1908 4.285260 AGAGGGTTCCGTTACTAACATGTT 59.715 41.667 16.68 16.68 0.00 2.71
1350 1909 4.976864 AGGGTTCCGTTACTAACATGTTT 58.023 39.130 17.78 1.74 0.00 2.83
1351 1910 6.014327 AGAGGGTTCCGTTACTAACATGTTTA 60.014 38.462 17.78 0.63 0.00 2.01
1352 1911 5.934043 AGGGTTCCGTTACTAACATGTTTAC 59.066 40.000 17.78 9.17 0.00 2.01
1353 1912 5.934043 GGGTTCCGTTACTAACATGTTTACT 59.066 40.000 17.78 2.09 0.00 2.24
1354 1913 6.427853 GGGTTCCGTTACTAACATGTTTACTT 59.572 38.462 17.78 1.47 0.00 2.24
1355 1914 7.360353 GGGTTCCGTTACTAACATGTTTACTTC 60.360 40.741 17.78 4.76 0.00 3.01
1356 1915 7.360353 GGTTCCGTTACTAACATGTTTACTTCC 60.360 40.741 17.78 3.70 0.00 3.46
1357 1916 6.757237 TCCGTTACTAACATGTTTACTTCCA 58.243 36.000 17.78 0.00 0.00 3.53
1358 1917 7.388437 TCCGTTACTAACATGTTTACTTCCAT 58.612 34.615 17.78 0.00 0.00 3.41
1359 1918 7.879160 TCCGTTACTAACATGTTTACTTCCATT 59.121 33.333 17.78 0.00 0.00 3.16
1360 1919 7.960738 CCGTTACTAACATGTTTACTTCCATTG 59.039 37.037 17.78 0.00 0.00 2.82
1361 1920 8.500773 CGTTACTAACATGTTTACTTCCATTGT 58.499 33.333 17.78 0.00 0.00 2.71
1364 1923 8.561738 ACTAACATGTTTACTTCCATTGTAGG 57.438 34.615 17.78 0.00 0.00 3.18
1365 1924 8.161425 ACTAACATGTTTACTTCCATTGTAGGT 58.839 33.333 17.78 0.00 0.00 3.08
1366 1925 9.661563 CTAACATGTTTACTTCCATTGTAGGTA 57.338 33.333 17.78 0.00 0.00 3.08
1367 1926 8.927675 AACATGTTTACTTCCATTGTAGGTAA 57.072 30.769 4.92 0.00 0.00 2.85
1368 1927 8.331730 ACATGTTTACTTCCATTGTAGGTAAC 57.668 34.615 0.00 0.00 0.00 2.50
1369 1928 7.940137 ACATGTTTACTTCCATTGTAGGTAACA 59.060 33.333 0.00 0.00 41.41 2.41
1370 1929 8.956426 CATGTTTACTTCCATTGTAGGTAACAT 58.044 33.333 0.00 0.00 38.10 2.71
1376 1935 8.519799 ACTTCCATTGTAGGTAACATATTTGG 57.480 34.615 0.00 0.00 38.10 3.28
1377 1936 8.113462 ACTTCCATTGTAGGTAACATATTTGGT 58.887 33.333 0.00 0.00 38.10 3.67
1378 1937 8.887264 TTCCATTGTAGGTAACATATTTGGTT 57.113 30.769 0.00 0.00 38.10 3.67
1379 1938 8.887264 TCCATTGTAGGTAACATATTTGGTTT 57.113 30.769 0.00 0.00 38.10 3.27
1380 1939 8.962679 TCCATTGTAGGTAACATATTTGGTTTC 58.037 33.333 0.00 0.00 38.10 2.78
1381 1940 8.744652 CCATTGTAGGTAACATATTTGGTTTCA 58.255 33.333 0.00 0.00 38.10 2.69
1385 1944 8.301002 TGTAGGTAACATATTTGGTTTCAAAGC 58.699 33.333 0.00 0.00 42.34 3.51
1386 1945 6.697395 AGGTAACATATTTGGTTTCAAAGCC 58.303 36.000 0.00 0.00 42.34 4.35
1387 1946 5.872617 GGTAACATATTTGGTTTCAAAGCCC 59.127 40.000 0.00 0.00 44.87 5.19
1388 1947 5.823861 AACATATTTGGTTTCAAAGCCCT 57.176 34.783 0.00 0.00 44.87 5.19
1389 1948 6.926630 AACATATTTGGTTTCAAAGCCCTA 57.073 33.333 0.00 0.00 44.87 3.53
1390 1949 6.280855 ACATATTTGGTTTCAAAGCCCTAC 57.719 37.500 0.00 0.00 44.87 3.18
1391 1950 3.934457 ATTTGGTTTCAAAGCCCTACG 57.066 42.857 0.00 0.00 44.87 3.51
1392 1951 2.351706 TTGGTTTCAAAGCCCTACGT 57.648 45.000 0.00 0.00 0.00 3.57
1393 1952 1.600023 TGGTTTCAAAGCCCTACGTG 58.400 50.000 0.00 0.00 0.00 4.49
1394 1953 0.240145 GGTTTCAAAGCCCTACGTGC 59.760 55.000 0.00 0.00 0.00 5.34
1395 1954 1.235724 GTTTCAAAGCCCTACGTGCT 58.764 50.000 0.00 0.00 41.89 4.40
1396 1955 1.197036 GTTTCAAAGCCCTACGTGCTC 59.803 52.381 0.00 0.00 38.34 4.26
1397 1956 0.685097 TTCAAAGCCCTACGTGCTCT 59.315 50.000 0.00 0.00 38.34 4.09
1398 1957 1.552578 TCAAAGCCCTACGTGCTCTA 58.447 50.000 0.00 0.00 38.34 2.43
1399 1958 1.203994 TCAAAGCCCTACGTGCTCTAC 59.796 52.381 0.00 0.00 38.34 2.59
1410 1969 2.674796 GTGCTCTACGTTTGGAGGAT 57.325 50.000 0.00 0.00 32.94 3.24
1411 1970 2.541556 GTGCTCTACGTTTGGAGGATC 58.458 52.381 0.00 0.00 32.94 3.36
1412 1971 2.166664 GTGCTCTACGTTTGGAGGATCT 59.833 50.000 0.00 0.00 32.94 2.75
1413 1972 3.380637 GTGCTCTACGTTTGGAGGATCTA 59.619 47.826 0.00 0.00 32.94 1.98
1414 1973 3.380637 TGCTCTACGTTTGGAGGATCTAC 59.619 47.826 0.00 0.00 33.73 2.59
1415 1974 3.548415 GCTCTACGTTTGGAGGATCTACG 60.548 52.174 0.00 0.00 39.14 3.51
1416 1975 3.875727 CTCTACGTTTGGAGGATCTACGA 59.124 47.826 0.00 0.00 37.62 3.43
1417 1976 4.264253 TCTACGTTTGGAGGATCTACGAA 58.736 43.478 0.00 0.00 37.62 3.85
1418 1977 4.885907 TCTACGTTTGGAGGATCTACGAAT 59.114 41.667 0.00 0.00 37.62 3.34
1419 1978 4.467198 ACGTTTGGAGGATCTACGAATT 57.533 40.909 0.00 0.00 37.62 2.17
1420 1979 4.430908 ACGTTTGGAGGATCTACGAATTC 58.569 43.478 0.00 0.00 37.62 2.17
1421 1980 3.802685 CGTTTGGAGGATCTACGAATTCC 59.197 47.826 0.00 0.00 36.83 3.01
1422 1981 4.127907 GTTTGGAGGATCTACGAATTCCC 58.872 47.826 0.00 0.00 33.73 3.97
1423 1982 2.326428 TGGAGGATCTACGAATTCCCC 58.674 52.381 0.00 0.00 33.73 4.81
1424 1983 1.624312 GGAGGATCTACGAATTCCCCC 59.376 57.143 0.00 0.00 33.73 5.40
1425 1984 2.610873 GAGGATCTACGAATTCCCCCT 58.389 52.381 0.00 0.00 0.00 4.79
1426 1985 3.501751 GGAGGATCTACGAATTCCCCCTA 60.502 52.174 0.00 0.00 33.73 3.53
1427 1986 3.508426 AGGATCTACGAATTCCCCCTAC 58.492 50.000 0.00 0.00 0.00 3.18
1428 1987 3.142407 AGGATCTACGAATTCCCCCTACT 59.858 47.826 0.00 0.00 0.00 2.57
1429 1988 3.902467 GGATCTACGAATTCCCCCTACTT 59.098 47.826 0.00 0.00 0.00 2.24
1430 1989 5.082425 GGATCTACGAATTCCCCCTACTTA 58.918 45.833 0.00 0.00 0.00 2.24
1431 1990 5.720520 GGATCTACGAATTCCCCCTACTTAT 59.279 44.000 0.00 0.00 0.00 1.73
1432 1991 6.212993 GGATCTACGAATTCCCCCTACTTATT 59.787 42.308 0.00 0.00 0.00 1.40
1433 1992 6.661304 TCTACGAATTCCCCCTACTTATTC 57.339 41.667 0.00 0.00 0.00 1.75
1434 1993 6.138263 TCTACGAATTCCCCCTACTTATTCA 58.862 40.000 0.00 0.00 0.00 2.57
1435 1994 5.703730 ACGAATTCCCCCTACTTATTCAA 57.296 39.130 0.00 0.00 0.00 2.69
1436 1995 6.069705 ACGAATTCCCCCTACTTATTCAAA 57.930 37.500 0.00 0.00 0.00 2.69
1437 1996 6.486941 ACGAATTCCCCCTACTTATTCAAAA 58.513 36.000 0.00 0.00 0.00 2.44
1438 1997 6.949463 ACGAATTCCCCCTACTTATTCAAAAA 59.051 34.615 0.00 0.00 0.00 1.94
1439 1998 7.094075 ACGAATTCCCCCTACTTATTCAAAAAC 60.094 37.037 0.00 0.00 0.00 2.43
1440 1999 7.122204 CGAATTCCCCCTACTTATTCAAAAACT 59.878 37.037 0.00 0.00 0.00 2.66
1441 2000 8.736097 AATTCCCCCTACTTATTCAAAAACTT 57.264 30.769 0.00 0.00 0.00 2.66
1442 2001 8.736097 ATTCCCCCTACTTATTCAAAAACTTT 57.264 30.769 0.00 0.00 0.00 2.66
1443 2002 7.770366 TCCCCCTACTTATTCAAAAACTTTC 57.230 36.000 0.00 0.00 0.00 2.62
1444 2003 6.722590 TCCCCCTACTTATTCAAAAACTTTCC 59.277 38.462 0.00 0.00 0.00 3.13
1445 2004 6.495526 CCCCCTACTTATTCAAAAACTTTCCA 59.504 38.462 0.00 0.00 0.00 3.53
1446 2005 7.015779 CCCCCTACTTATTCAAAAACTTTCCAA 59.984 37.037 0.00 0.00 0.00 3.53
1447 2006 8.088365 CCCCTACTTATTCAAAAACTTTCCAAG 58.912 37.037 0.00 0.00 0.00 3.61
1448 2007 8.088365 CCCTACTTATTCAAAAACTTTCCAAGG 58.912 37.037 0.00 0.00 0.00 3.61
1449 2008 7.598869 CCTACTTATTCAAAAACTTTCCAAGGC 59.401 37.037 0.00 0.00 0.00 4.35
1450 2009 6.288294 ACTTATTCAAAAACTTTCCAAGGCC 58.712 36.000 0.00 0.00 0.00 5.19
1451 2010 3.552132 TTCAAAAACTTTCCAAGGCCC 57.448 42.857 0.00 0.00 0.00 5.80
1452 2011 1.410882 TCAAAAACTTTCCAAGGCCCG 59.589 47.619 0.00 0.00 0.00 6.13
1453 2012 0.105964 AAAAACTTTCCAAGGCCCGC 59.894 50.000 0.00 0.00 0.00 6.13
1454 2013 1.754380 AAAACTTTCCAAGGCCCGCC 61.754 55.000 0.00 0.00 0.00 6.13
1463 2022 2.448542 AGGCCCGCCTCATGGTAT 60.449 61.111 1.26 0.00 44.43 2.73
1464 2023 2.032681 GGCCCGCCTCATGGTATC 59.967 66.667 0.00 0.00 35.27 2.24
1465 2024 2.032681 GCCCGCCTCATGGTATCC 59.967 66.667 0.00 0.00 35.27 2.59
1466 2025 2.818169 GCCCGCCTCATGGTATCCA 61.818 63.158 0.00 0.00 38.19 3.41
1467 2026 1.836391 CCCGCCTCATGGTATCCAA 59.164 57.895 0.00 0.00 36.95 3.53
1468 2027 0.250467 CCCGCCTCATGGTATCCAAG 60.250 60.000 0.00 0.00 36.95 3.61
1469 2028 0.469917 CCGCCTCATGGTATCCAAGT 59.530 55.000 0.00 0.00 36.95 3.16
1470 2029 1.134098 CCGCCTCATGGTATCCAAGTT 60.134 52.381 0.00 0.00 36.95 2.66
1471 2030 1.942657 CGCCTCATGGTATCCAAGTTG 59.057 52.381 0.00 0.00 36.95 3.16
1472 2031 2.419990 CGCCTCATGGTATCCAAGTTGA 60.420 50.000 3.87 0.00 36.95 3.18
1473 2032 3.620488 GCCTCATGGTATCCAAGTTGAA 58.380 45.455 3.87 0.00 36.95 2.69
1474 2033 4.016444 GCCTCATGGTATCCAAGTTGAAA 58.984 43.478 3.87 0.00 36.95 2.69
1475 2034 4.096984 GCCTCATGGTATCCAAGTTGAAAG 59.903 45.833 3.87 0.00 36.95 2.62
1476 2035 5.500234 CCTCATGGTATCCAAGTTGAAAGA 58.500 41.667 3.87 0.00 36.95 2.52
1477 2036 5.587844 CCTCATGGTATCCAAGTTGAAAGAG 59.412 44.000 3.87 0.69 36.95 2.85
1478 2037 6.373005 TCATGGTATCCAAGTTGAAAGAGA 57.627 37.500 3.87 0.00 36.95 3.10
1479 2038 6.962182 TCATGGTATCCAAGTTGAAAGAGAT 58.038 36.000 3.87 0.69 36.95 2.75
1480 2039 8.089625 TCATGGTATCCAAGTTGAAAGAGATA 57.910 34.615 3.87 0.00 36.95 1.98
1481 2040 8.548025 TCATGGTATCCAAGTTGAAAGAGATAA 58.452 33.333 3.87 0.00 36.95 1.75
1482 2041 8.834465 CATGGTATCCAAGTTGAAAGAGATAAG 58.166 37.037 3.87 0.00 36.95 1.73
1483 2042 7.918076 TGGTATCCAAGTTGAAAGAGATAAGT 58.082 34.615 3.87 0.00 0.00 2.24
1484 2043 8.383175 TGGTATCCAAGTTGAAAGAGATAAGTT 58.617 33.333 3.87 0.00 0.00 2.66
1485 2044 8.669243 GGTATCCAAGTTGAAAGAGATAAGTTG 58.331 37.037 3.87 0.00 35.53 3.16
1486 2045 9.436957 GTATCCAAGTTGAAAGAGATAAGTTGA 57.563 33.333 3.87 0.00 37.06 3.18
1487 2046 8.924511 ATCCAAGTTGAAAGAGATAAGTTGAA 57.075 30.769 3.87 0.00 37.06 2.69
1488 2047 8.154649 TCCAAGTTGAAAGAGATAAGTTGAAC 57.845 34.615 3.87 0.00 37.06 3.18
1489 2048 7.773224 TCCAAGTTGAAAGAGATAAGTTGAACA 59.227 33.333 3.87 0.00 37.06 3.18
1490 2049 8.405531 CCAAGTTGAAAGAGATAAGTTGAACAA 58.594 33.333 3.87 0.00 37.06 2.83
1491 2050 9.443283 CAAGTTGAAAGAGATAAGTTGAACAAG 57.557 33.333 0.00 0.00 37.06 3.16
1492 2051 8.738645 AGTTGAAAGAGATAAGTTGAACAAGT 57.261 30.769 0.00 0.00 0.00 3.16
1493 2052 9.832445 AGTTGAAAGAGATAAGTTGAACAAGTA 57.168 29.630 0.00 0.00 0.00 2.24
1496 2055 9.219603 TGAAAGAGATAAGTTGAACAAGTATGG 57.780 33.333 0.00 0.00 0.00 2.74
1497 2056 9.220767 GAAAGAGATAAGTTGAACAAGTATGGT 57.779 33.333 0.00 0.00 0.00 3.55
1498 2057 8.779354 AAGAGATAAGTTGAACAAGTATGGTC 57.221 34.615 0.00 0.00 43.94 4.02
1499 2058 7.036220 AGAGATAAGTTGAACAAGTATGGTCG 58.964 38.462 0.00 0.00 46.79 4.79
1500 2059 6.698380 AGATAAGTTGAACAAGTATGGTCGT 58.302 36.000 0.00 0.00 46.79 4.34
1501 2060 6.812160 AGATAAGTTGAACAAGTATGGTCGTC 59.188 38.462 0.00 0.00 46.79 4.20
1502 2061 3.660865 AGTTGAACAAGTATGGTCGTCC 58.339 45.455 0.00 0.00 46.79 4.79
1503 2062 3.323979 AGTTGAACAAGTATGGTCGTCCT 59.676 43.478 0.00 0.00 46.79 3.85
1504 2063 4.062991 GTTGAACAAGTATGGTCGTCCTT 58.937 43.478 0.00 0.00 46.79 3.36
1505 2064 4.345859 TGAACAAGTATGGTCGTCCTTT 57.654 40.909 0.00 0.00 46.79 3.11
1506 2065 5.471556 TGAACAAGTATGGTCGTCCTTTA 57.528 39.130 0.00 0.00 46.79 1.85
1507 2066 6.045072 TGAACAAGTATGGTCGTCCTTTAT 57.955 37.500 0.00 0.00 46.79 1.40
1508 2067 6.469410 TGAACAAGTATGGTCGTCCTTTATT 58.531 36.000 0.00 0.00 46.79 1.40
1509 2068 6.370442 TGAACAAGTATGGTCGTCCTTTATTG 59.630 38.462 0.00 5.38 46.79 1.90
1510 2069 5.183228 ACAAGTATGGTCGTCCTTTATTGG 58.817 41.667 0.00 0.00 34.23 3.16
1511 2070 4.417426 AGTATGGTCGTCCTTTATTGGG 57.583 45.455 0.00 0.00 34.23 4.12
1512 2071 4.035112 AGTATGGTCGTCCTTTATTGGGA 58.965 43.478 0.00 0.00 34.23 4.37
1513 2072 4.658901 AGTATGGTCGTCCTTTATTGGGAT 59.341 41.667 0.00 0.00 35.15 3.85
1514 2073 3.275617 TGGTCGTCCTTTATTGGGATG 57.724 47.619 0.00 0.00 40.26 3.51
1515 2074 2.574369 TGGTCGTCCTTTATTGGGATGT 59.426 45.455 0.00 0.00 39.94 3.06
1516 2075 3.775866 TGGTCGTCCTTTATTGGGATGTA 59.224 43.478 0.00 0.00 39.94 2.29
1517 2076 4.124970 GGTCGTCCTTTATTGGGATGTAC 58.875 47.826 0.00 0.00 39.94 2.90
1518 2077 4.141779 GGTCGTCCTTTATTGGGATGTACT 60.142 45.833 0.00 0.00 39.94 2.73
1519 2078 5.069516 GGTCGTCCTTTATTGGGATGTACTA 59.930 44.000 0.00 0.00 39.94 1.82
1520 2079 6.239515 GGTCGTCCTTTATTGGGATGTACTAT 60.240 42.308 0.00 0.00 39.94 2.12
1521 2080 7.215085 GTCGTCCTTTATTGGGATGTACTATT 58.785 38.462 0.00 0.00 39.94 1.73
1522 2081 8.362639 GTCGTCCTTTATTGGGATGTACTATTA 58.637 37.037 0.00 0.00 39.94 0.98
1523 2082 8.926374 TCGTCCTTTATTGGGATGTACTATTAA 58.074 33.333 0.00 0.00 39.94 1.40
1524 2083 9.550406 CGTCCTTTATTGGGATGTACTATTAAA 57.450 33.333 0.00 0.00 35.70 1.52
1526 2085 9.856162 TCCTTTATTGGGATGTACTATTAAACC 57.144 33.333 0.00 0.00 0.00 3.27
1527 2086 9.635404 CCTTTATTGGGATGTACTATTAAACCA 57.365 33.333 0.00 0.00 0.00 3.67
1546 2105 4.399004 CCAAAATTGGGATTATCCGCAA 57.601 40.909 14.36 14.36 44.70 4.85
1547 2106 4.764172 CCAAAATTGGGATTATCCGCAAA 58.236 39.130 15.45 7.04 44.70 3.68
1548 2107 5.181748 CCAAAATTGGGATTATCCGCAAAA 58.818 37.500 15.45 5.01 44.70 2.44
1549 2108 5.645497 CCAAAATTGGGATTATCCGCAAAAA 59.355 36.000 15.45 3.01 44.70 1.94
1571 2130 8.500753 AAAAATTATGGTAGAGCGTGTTATGA 57.499 30.769 0.00 0.00 0.00 2.15
1572 2131 7.715265 AAATTATGGTAGAGCGTGTTATGAG 57.285 36.000 0.00 0.00 0.00 2.90
1573 2132 5.847111 TTATGGTAGAGCGTGTTATGAGT 57.153 39.130 0.00 0.00 0.00 3.41
1574 2133 3.503827 TGGTAGAGCGTGTTATGAGTG 57.496 47.619 0.00 0.00 0.00 3.51
1575 2134 2.823747 TGGTAGAGCGTGTTATGAGTGT 59.176 45.455 0.00 0.00 0.00 3.55
1576 2135 3.119602 TGGTAGAGCGTGTTATGAGTGTC 60.120 47.826 0.00 0.00 0.00 3.67
1577 2136 3.128938 GGTAGAGCGTGTTATGAGTGTCT 59.871 47.826 0.00 0.00 0.00 3.41
1578 2137 4.334759 GGTAGAGCGTGTTATGAGTGTCTA 59.665 45.833 0.00 0.00 0.00 2.59
1579 2138 4.358494 AGAGCGTGTTATGAGTGTCTAC 57.642 45.455 0.00 0.00 0.00 2.59
1580 2139 3.099362 GAGCGTGTTATGAGTGTCTACG 58.901 50.000 0.00 0.00 0.00 3.51
1581 2140 2.486982 AGCGTGTTATGAGTGTCTACGT 59.513 45.455 0.00 0.00 33.13 3.57
1582 2141 2.592897 GCGTGTTATGAGTGTCTACGTG 59.407 50.000 0.00 0.00 33.13 4.49
1583 2142 3.168963 CGTGTTATGAGTGTCTACGTGG 58.831 50.000 0.00 0.00 0.00 4.94
1584 2143 3.365666 CGTGTTATGAGTGTCTACGTGGT 60.366 47.826 0.00 0.00 0.00 4.16
1585 2144 3.918591 GTGTTATGAGTGTCTACGTGGTG 59.081 47.826 0.00 0.00 0.00 4.17
1586 2145 3.057104 TGTTATGAGTGTCTACGTGGTGG 60.057 47.826 0.00 0.00 0.00 4.61
1587 2146 1.919240 ATGAGTGTCTACGTGGTGGA 58.081 50.000 0.00 0.00 0.00 4.02
1588 2147 0.956633 TGAGTGTCTACGTGGTGGAC 59.043 55.000 0.00 5.44 42.91 4.02
1589 2148 1.245732 GAGTGTCTACGTGGTGGACT 58.754 55.000 12.43 0.00 43.00 3.85
1590 2149 1.612463 GAGTGTCTACGTGGTGGACTT 59.388 52.381 12.43 2.68 43.00 3.01
1591 2150 1.340248 AGTGTCTACGTGGTGGACTTG 59.660 52.381 12.43 0.00 43.00 3.16
1592 2151 1.338973 GTGTCTACGTGGTGGACTTGA 59.661 52.381 12.43 0.00 43.00 3.02
1593 2152 2.029290 GTGTCTACGTGGTGGACTTGAT 60.029 50.000 12.43 0.00 43.00 2.57
1594 2153 2.631062 TGTCTACGTGGTGGACTTGATT 59.369 45.455 12.43 0.00 43.00 2.57
1595 2154 3.070446 TGTCTACGTGGTGGACTTGATTT 59.930 43.478 12.43 0.00 43.00 2.17
1596 2155 4.062991 GTCTACGTGGTGGACTTGATTTT 58.937 43.478 0.00 0.00 40.17 1.82
1597 2156 5.221481 TGTCTACGTGGTGGACTTGATTTTA 60.221 40.000 12.43 0.00 43.00 1.52
1598 2157 5.119743 GTCTACGTGGTGGACTTGATTTTAC 59.880 44.000 0.00 0.00 40.17 2.01
1599 2158 3.143728 ACGTGGTGGACTTGATTTTACC 58.856 45.455 0.00 0.00 0.00 2.85
1600 2159 3.142951 CGTGGTGGACTTGATTTTACCA 58.857 45.455 0.00 0.00 35.97 3.25
1601 2160 3.566322 CGTGGTGGACTTGATTTTACCAA 59.434 43.478 0.00 0.00 39.63 3.67
1602 2161 4.036971 CGTGGTGGACTTGATTTTACCAAA 59.963 41.667 0.00 0.00 39.63 3.28
1603 2162 5.528870 GTGGTGGACTTGATTTTACCAAAG 58.471 41.667 0.00 0.00 39.63 2.77
1604 2163 5.300792 GTGGTGGACTTGATTTTACCAAAGA 59.699 40.000 0.00 0.00 39.63 2.52
1605 2164 6.015434 GTGGTGGACTTGATTTTACCAAAGAT 60.015 38.462 0.00 0.00 39.63 2.40
1606 2165 6.015519 TGGTGGACTTGATTTTACCAAAGATG 60.016 38.462 0.00 0.00 35.45 2.90
1607 2166 6.208599 GGTGGACTTGATTTTACCAAAGATGA 59.791 38.462 0.00 0.00 32.32 2.92
1608 2167 7.093771 GGTGGACTTGATTTTACCAAAGATGAT 60.094 37.037 0.00 0.00 32.32 2.45
1609 2168 7.756722 GTGGACTTGATTTTACCAAAGATGATG 59.243 37.037 0.00 0.00 32.32 3.07
1610 2169 7.669304 TGGACTTGATTTTACCAAAGATGATGA 59.331 33.333 0.00 0.00 0.00 2.92
1611 2170 8.522830 GGACTTGATTTTACCAAAGATGATGAA 58.477 33.333 0.00 0.00 0.00 2.57
1612 2171 9.912634 GACTTGATTTTACCAAAGATGATGAAA 57.087 29.630 0.00 0.00 0.00 2.69
1615 2174 8.741101 TGATTTTACCAAAGATGATGAAAACG 57.259 30.769 0.00 0.00 0.00 3.60
1616 2175 8.356657 TGATTTTACCAAAGATGATGAAAACGT 58.643 29.630 0.00 0.00 0.00 3.99
1617 2176 9.834628 GATTTTACCAAAGATGATGAAAACGTA 57.165 29.630 0.00 0.00 0.00 3.57
1620 2179 9.453325 TTTACCAAAGATGATGAAAACGTAAAC 57.547 29.630 0.00 0.00 0.00 2.01
1621 2180 7.272037 ACCAAAGATGATGAAAACGTAAACT 57.728 32.000 0.00 0.00 0.00 2.66
1622 2181 7.360361 ACCAAAGATGATGAAAACGTAAACTC 58.640 34.615 0.00 0.00 0.00 3.01
1623 2182 7.012894 ACCAAAGATGATGAAAACGTAAACTCA 59.987 33.333 0.00 0.00 0.00 3.41
1624 2183 7.323656 CCAAAGATGATGAAAACGTAAACTCAC 59.676 37.037 0.00 0.00 0.00 3.51
1625 2184 7.490962 AAGATGATGAAAACGTAAACTCACA 57.509 32.000 0.00 0.00 0.00 3.58
1626 2185 7.490962 AGATGATGAAAACGTAAACTCACAA 57.509 32.000 0.00 0.00 0.00 3.33
1627 2186 7.352739 AGATGATGAAAACGTAAACTCACAAC 58.647 34.615 0.00 0.00 0.00 3.32
1628 2187 5.812652 TGATGAAAACGTAAACTCACAACC 58.187 37.500 0.00 0.00 0.00 3.77
1629 2188 5.354513 TGATGAAAACGTAAACTCACAACCA 59.645 36.000 0.00 0.00 0.00 3.67
1630 2189 5.821516 TGAAAACGTAAACTCACAACCAT 57.178 34.783 0.00 0.00 0.00 3.55
1631 2190 6.197364 TGAAAACGTAAACTCACAACCATT 57.803 33.333 0.00 0.00 0.00 3.16
1632 2191 6.622549 TGAAAACGTAAACTCACAACCATTT 58.377 32.000 0.00 0.00 0.00 2.32
1633 2192 7.759465 TGAAAACGTAAACTCACAACCATTTA 58.241 30.769 0.00 0.00 0.00 1.40
1634 2193 8.407064 TGAAAACGTAAACTCACAACCATTTAT 58.593 29.630 0.00 0.00 0.00 1.40
1635 2194 8.568732 AAAACGTAAACTCACAACCATTTATG 57.431 30.769 0.00 0.00 32.29 1.90
1636 2195 5.695818 ACGTAAACTCACAACCATTTATGC 58.304 37.500 0.00 0.00 30.11 3.14
1637 2196 4.786068 CGTAAACTCACAACCATTTATGCG 59.214 41.667 0.00 0.00 0.00 4.73
1638 2197 2.919666 ACTCACAACCATTTATGCGC 57.080 45.000 0.00 0.00 0.00 6.09
1639 2198 2.436417 ACTCACAACCATTTATGCGCT 58.564 42.857 9.73 0.00 0.00 5.92
1640 2199 2.162208 ACTCACAACCATTTATGCGCTG 59.838 45.455 9.73 0.00 0.00 5.18
1641 2200 1.472082 TCACAACCATTTATGCGCTGG 59.528 47.619 9.73 10.37 36.09 4.85
1642 2201 1.472082 CACAACCATTTATGCGCTGGA 59.528 47.619 18.50 0.00 34.08 3.86
1643 2202 1.745087 ACAACCATTTATGCGCTGGAG 59.255 47.619 18.50 12.40 34.08 3.86
1644 2203 2.016318 CAACCATTTATGCGCTGGAGA 58.984 47.619 18.50 0.00 34.08 3.71
1645 2204 1.959042 ACCATTTATGCGCTGGAGAG 58.041 50.000 18.50 0.33 34.08 3.20
1646 2205 1.486310 ACCATTTATGCGCTGGAGAGA 59.514 47.619 18.50 0.00 34.08 3.10
1647 2206 1.869767 CCATTTATGCGCTGGAGAGAC 59.130 52.381 9.73 0.00 31.38 3.36
1648 2207 1.869767 CATTTATGCGCTGGAGAGACC 59.130 52.381 9.73 0.00 39.54 3.85
1649 2208 0.179111 TTTATGCGCTGGAGAGACCG 60.179 55.000 9.73 0.00 42.61 4.79
1650 2209 1.320344 TTATGCGCTGGAGAGACCGT 61.320 55.000 9.73 0.00 42.61 4.83
1651 2210 1.320344 TATGCGCTGGAGAGACCGTT 61.320 55.000 9.73 0.00 42.61 4.44
1652 2211 2.048127 GCGCTGGAGAGACCGTTT 60.048 61.111 0.00 0.00 42.61 3.60
1653 2212 1.668151 GCGCTGGAGAGACCGTTTT 60.668 57.895 0.00 0.00 42.61 2.43
1654 2213 1.901650 GCGCTGGAGAGACCGTTTTG 61.902 60.000 0.00 0.00 42.61 2.44
1655 2214 0.600255 CGCTGGAGAGACCGTTTTGT 60.600 55.000 0.00 0.00 42.61 2.83
1656 2215 1.149148 GCTGGAGAGACCGTTTTGTC 58.851 55.000 0.00 0.00 42.61 3.18
1658 2217 2.807108 GCTGGAGAGACCGTTTTGTCTT 60.807 50.000 0.00 0.00 45.41 3.01
1659 2218 3.467803 CTGGAGAGACCGTTTTGTCTTT 58.532 45.455 0.00 0.00 45.41 2.52
1660 2219 3.877508 CTGGAGAGACCGTTTTGTCTTTT 59.122 43.478 0.00 0.00 45.41 2.27
1661 2220 3.625764 TGGAGAGACCGTTTTGTCTTTTG 59.374 43.478 0.00 0.00 45.41 2.44
1662 2221 3.626217 GGAGAGACCGTTTTGTCTTTTGT 59.374 43.478 0.00 0.00 45.41 2.83
1663 2222 4.495844 GGAGAGACCGTTTTGTCTTTTGTG 60.496 45.833 0.00 0.00 45.41 3.33
1664 2223 3.105937 GAGACCGTTTTGTCTTTTGTGC 58.894 45.455 0.00 0.00 45.41 4.57
1665 2224 2.159296 AGACCGTTTTGTCTTTTGTGCC 60.159 45.455 0.00 0.00 42.92 5.01
1666 2225 1.196200 CCGTTTTGTCTTTTGTGCCG 58.804 50.000 0.00 0.00 0.00 5.69
1667 2226 1.202200 CCGTTTTGTCTTTTGTGCCGA 60.202 47.619 0.00 0.00 0.00 5.54
1668 2227 2.520979 CGTTTTGTCTTTTGTGCCGAA 58.479 42.857 0.00 0.00 0.00 4.30
1669 2228 2.529894 CGTTTTGTCTTTTGTGCCGAAG 59.470 45.455 0.00 0.00 0.00 3.79
1670 2229 2.202295 TTTGTCTTTTGTGCCGAAGC 57.798 45.000 0.00 0.00 40.48 3.86
1671 2230 1.388547 TTGTCTTTTGTGCCGAAGCT 58.611 45.000 0.00 0.00 40.80 3.74
1672 2231 2.248280 TGTCTTTTGTGCCGAAGCTA 57.752 45.000 0.00 0.00 40.80 3.32
1673 2232 2.778299 TGTCTTTTGTGCCGAAGCTAT 58.222 42.857 0.00 0.00 40.80 2.97
1674 2233 3.146066 TGTCTTTTGTGCCGAAGCTATT 58.854 40.909 0.00 0.00 40.80 1.73
1675 2234 3.568007 TGTCTTTTGTGCCGAAGCTATTT 59.432 39.130 0.00 0.00 40.80 1.40
1676 2235 4.757657 TGTCTTTTGTGCCGAAGCTATTTA 59.242 37.500 0.00 0.00 40.80 1.40
1677 2236 5.414454 TGTCTTTTGTGCCGAAGCTATTTAT 59.586 36.000 0.00 0.00 40.80 1.40
1678 2237 6.596106 TGTCTTTTGTGCCGAAGCTATTTATA 59.404 34.615 0.00 0.00 40.80 0.98
1679 2238 7.119992 TGTCTTTTGTGCCGAAGCTATTTATAA 59.880 33.333 0.00 0.00 40.80 0.98
1680 2239 7.966204 GTCTTTTGTGCCGAAGCTATTTATAAA 59.034 33.333 0.00 0.00 40.80 1.40
1681 2240 8.682710 TCTTTTGTGCCGAAGCTATTTATAAAT 58.317 29.630 14.86 14.86 40.80 1.40
1682 2241 8.850454 TTTTGTGCCGAAGCTATTTATAAATC 57.150 30.769 13.95 1.71 40.80 2.17
1683 2242 7.561021 TTGTGCCGAAGCTATTTATAAATCA 57.439 32.000 13.95 1.47 40.80 2.57
1684 2243 6.954944 TGTGCCGAAGCTATTTATAAATCAC 58.045 36.000 13.95 12.87 40.80 3.06
1685 2244 6.540551 TGTGCCGAAGCTATTTATAAATCACA 59.459 34.615 13.95 14.94 40.80 3.58
1686 2245 7.072030 GTGCCGAAGCTATTTATAAATCACAG 58.928 38.462 13.95 7.85 40.80 3.66
1687 2246 6.204688 TGCCGAAGCTATTTATAAATCACAGG 59.795 38.462 13.95 11.78 40.80 4.00
1688 2247 6.603095 CCGAAGCTATTTATAAATCACAGGC 58.397 40.000 13.95 11.32 0.00 4.85
1689 2248 6.348540 CCGAAGCTATTTATAAATCACAGGCC 60.349 42.308 13.95 0.00 0.00 5.19
1690 2249 6.560253 AAGCTATTTATAAATCACAGGCCG 57.440 37.500 13.95 0.00 0.00 6.13
1691 2250 5.865085 AGCTATTTATAAATCACAGGCCGA 58.135 37.500 13.95 0.00 0.00 5.54
1692 2251 6.296026 AGCTATTTATAAATCACAGGCCGAA 58.704 36.000 13.95 0.00 0.00 4.30
1693 2252 6.770785 AGCTATTTATAAATCACAGGCCGAAA 59.229 34.615 13.95 0.00 0.00 3.46
1694 2253 6.856426 GCTATTTATAAATCACAGGCCGAAAC 59.144 38.462 13.95 0.00 0.00 2.78
1695 2254 5.570234 TTTATAAATCACAGGCCGAAACC 57.430 39.130 0.00 0.00 0.00 3.27
1696 2255 1.444836 TAAATCACAGGCCGAAACCG 58.555 50.000 0.00 0.00 33.69 4.44
1699 2258 3.353836 CACAGGCCGAAACCGGTG 61.354 66.667 8.52 0.00 46.89 4.94
1707 2266 2.611974 CCGAAACCGGTGAAATCAAG 57.388 50.000 8.52 0.00 42.05 3.02
1708 2267 1.199097 CCGAAACCGGTGAAATCAAGG 59.801 52.381 8.52 0.00 42.05 3.61
1709 2268 1.199097 CGAAACCGGTGAAATCAAGGG 59.801 52.381 8.52 5.60 32.38 3.95
1710 2269 1.544246 GAAACCGGTGAAATCAAGGGG 59.456 52.381 8.52 3.56 32.38 4.79
1711 2270 0.898326 AACCGGTGAAATCAAGGGGC 60.898 55.000 8.52 0.00 32.38 5.80
1712 2271 1.304052 CCGGTGAAATCAAGGGGCA 60.304 57.895 0.00 0.00 0.00 5.36
1713 2272 0.684153 CCGGTGAAATCAAGGGGCAT 60.684 55.000 0.00 0.00 0.00 4.40
1714 2273 1.185315 CGGTGAAATCAAGGGGCATT 58.815 50.000 0.00 0.00 0.00 3.56
1715 2274 2.374184 CGGTGAAATCAAGGGGCATTA 58.626 47.619 0.00 0.00 0.00 1.90
1716 2275 2.099098 CGGTGAAATCAAGGGGCATTAC 59.901 50.000 0.00 0.00 0.00 1.89
1717 2276 3.365472 GGTGAAATCAAGGGGCATTACT 58.635 45.455 0.00 0.00 0.00 2.24
1718 2277 3.769300 GGTGAAATCAAGGGGCATTACTT 59.231 43.478 0.00 0.00 0.00 2.24
1719 2278 4.381932 GGTGAAATCAAGGGGCATTACTTG 60.382 45.833 0.00 0.00 44.09 3.16
1740 2299 2.890474 GCGACTGCGGGTACATGG 60.890 66.667 0.00 0.00 38.16 3.66
1741 2300 2.889617 CGACTGCGGGTACATGGA 59.110 61.111 0.00 0.00 0.00 3.41
1742 2301 1.518572 CGACTGCGGGTACATGGAC 60.519 63.158 0.00 0.00 0.00 4.02
1743 2302 1.594833 GACTGCGGGTACATGGACA 59.405 57.895 10.99 0.00 0.00 4.02
1744 2303 0.036765 GACTGCGGGTACATGGACAA 60.037 55.000 10.99 0.00 0.00 3.18
1745 2304 0.321298 ACTGCGGGTACATGGACAAC 60.321 55.000 10.99 0.81 0.00 3.32
1746 2305 0.036388 CTGCGGGTACATGGACAACT 60.036 55.000 10.99 0.00 0.00 3.16
1747 2306 0.321210 TGCGGGTACATGGACAACTG 60.321 55.000 10.99 0.00 0.00 3.16
1748 2307 0.321298 GCGGGTACATGGACAACTGT 60.321 55.000 10.99 0.00 0.00 3.55
1749 2308 1.880646 GCGGGTACATGGACAACTGTT 60.881 52.381 10.99 0.00 0.00 3.16
1750 2309 2.500229 CGGGTACATGGACAACTGTTT 58.500 47.619 10.99 0.00 0.00 2.83
1751 2310 2.225491 CGGGTACATGGACAACTGTTTG 59.775 50.000 10.99 0.00 38.83 2.93
1752 2311 2.556622 GGGTACATGGACAACTGTTTGG 59.443 50.000 10.99 0.00 37.00 3.28
1753 2312 3.482436 GGTACATGGACAACTGTTTGGA 58.518 45.455 10.99 0.00 37.00 3.53
1754 2313 3.252458 GGTACATGGACAACTGTTTGGAC 59.748 47.826 10.99 0.00 37.00 4.02
1755 2314 3.297134 ACATGGACAACTGTTTGGACT 57.703 42.857 0.00 0.00 37.00 3.85
1756 2315 2.951642 ACATGGACAACTGTTTGGACTG 59.048 45.455 0.00 0.00 37.00 3.51
1757 2316 3.213506 CATGGACAACTGTTTGGACTGA 58.786 45.455 0.00 0.00 37.00 3.41
1758 2317 3.576078 TGGACAACTGTTTGGACTGAT 57.424 42.857 0.00 0.00 37.00 2.90
1759 2318 3.213506 TGGACAACTGTTTGGACTGATG 58.786 45.455 0.00 0.00 37.00 3.07
1760 2319 2.554032 GGACAACTGTTTGGACTGATGG 59.446 50.000 0.00 0.00 37.00 3.51
1761 2320 3.476552 GACAACTGTTTGGACTGATGGA 58.523 45.455 0.00 0.00 37.00 3.41
1762 2321 3.214328 ACAACTGTTTGGACTGATGGAC 58.786 45.455 0.00 0.00 37.00 4.02
1763 2322 3.117888 ACAACTGTTTGGACTGATGGACT 60.118 43.478 0.00 0.00 37.00 3.85
1764 2323 3.864789 ACTGTTTGGACTGATGGACTT 57.135 42.857 0.00 0.00 0.00 3.01
1765 2324 4.974645 ACTGTTTGGACTGATGGACTTA 57.025 40.909 0.00 0.00 0.00 2.24
1766 2325 4.642429 ACTGTTTGGACTGATGGACTTAC 58.358 43.478 0.00 0.00 0.00 2.34
1767 2326 4.003648 CTGTTTGGACTGATGGACTTACC 58.996 47.826 0.00 0.00 39.54 2.85
1783 2342 5.706916 GACTTACCAGTCTTGATCGTTACA 58.293 41.667 0.00 0.00 45.54 2.41
1784 2343 6.092955 ACTTACCAGTCTTGATCGTTACAA 57.907 37.500 0.00 0.00 0.00 2.41
1785 2344 6.518493 ACTTACCAGTCTTGATCGTTACAAA 58.482 36.000 0.00 0.00 0.00 2.83
1786 2345 6.645415 ACTTACCAGTCTTGATCGTTACAAAG 59.355 38.462 0.00 0.00 0.00 2.77
1787 2346 4.315803 ACCAGTCTTGATCGTTACAAAGG 58.684 43.478 0.00 0.00 0.00 3.11
1788 2347 4.039973 ACCAGTCTTGATCGTTACAAAGGA 59.960 41.667 0.00 0.00 0.00 3.36
1789 2348 4.389077 CCAGTCTTGATCGTTACAAAGGAC 59.611 45.833 0.00 0.00 0.00 3.85
1790 2349 4.090066 CAGTCTTGATCGTTACAAAGGACG 59.910 45.833 0.00 0.00 40.43 4.79
1795 2354 2.736144 TCGTTACAAAGGACGATGCT 57.264 45.000 0.00 0.00 42.67 3.79
1796 2355 3.853831 TCGTTACAAAGGACGATGCTA 57.146 42.857 0.00 0.00 42.67 3.49
1797 2356 4.380841 TCGTTACAAAGGACGATGCTAT 57.619 40.909 0.00 0.00 42.67 2.97
1798 2357 4.357142 TCGTTACAAAGGACGATGCTATC 58.643 43.478 0.00 0.00 42.67 2.08
1799 2358 4.109766 CGTTACAAAGGACGATGCTATCA 58.890 43.478 0.00 0.00 41.53 2.15
1800 2359 4.026804 CGTTACAAAGGACGATGCTATCAC 60.027 45.833 0.00 0.00 41.53 3.06
1801 2360 3.610040 ACAAAGGACGATGCTATCACA 57.390 42.857 0.00 0.00 0.00 3.58
1802 2361 4.142609 ACAAAGGACGATGCTATCACAT 57.857 40.909 0.00 0.00 0.00 3.21
1803 2362 4.122776 ACAAAGGACGATGCTATCACATC 58.877 43.478 0.00 0.00 42.52 3.06
1809 2368 2.739885 GATGCTATCACATCGAGCCT 57.260 50.000 0.00 0.00 37.32 4.58
1810 2369 2.335752 GATGCTATCACATCGAGCCTG 58.664 52.381 0.00 0.00 37.32 4.85
1811 2370 1.114627 TGCTATCACATCGAGCCTGT 58.885 50.000 0.00 0.00 35.24 4.00
1812 2371 1.482182 TGCTATCACATCGAGCCTGTT 59.518 47.619 0.00 0.00 35.24 3.16
1813 2372 1.863454 GCTATCACATCGAGCCTGTTG 59.137 52.381 0.00 0.00 0.00 3.33
1814 2373 1.863454 CTATCACATCGAGCCTGTTGC 59.137 52.381 0.00 0.00 41.71 4.17
2120 2679 2.264109 AGAGCGTGTTATGAGTGTCG 57.736 50.000 0.00 0.00 0.00 4.35
3111 3674 5.863935 GCAATTAAACTCGGCTCAATCTTTT 59.136 36.000 0.00 0.00 0.00 2.27
3461 4564 6.958767 CCTGGAAAAGGTAGAAGAATAGGAA 58.041 40.000 0.00 0.00 41.74 3.36
3653 4756 5.061920 ACGTTTGAAACTTTTAACAGGCA 57.938 34.783 6.49 0.00 0.00 4.75
3871 4977 9.116067 CCTATTCCATGACGGATTTAAACTTAA 57.884 33.333 0.00 0.00 45.80 1.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 55 2.887783 GTCCAGAGAAGAGACACTGACA 59.112 50.000 0.00 0.00 31.94 3.58
104 105 0.251787 GTCACTTTTCCCCCAGGCAT 60.252 55.000 0.00 0.00 0.00 4.40
944 960 8.783660 ATTCTCACAATAATAGGGTCTACTCA 57.216 34.615 0.00 0.00 0.00 3.41
971 987 8.661345 GTCCCTCCCTATAACTCTTGAATTAAT 58.339 37.037 0.00 0.00 0.00 1.40
1118 1134 1.134965 CAAGCTGAGGACTTACTCGGG 60.135 57.143 0.00 0.00 42.78 5.14
1204 1763 4.289672 ACTGGTAAGTCCATCAGTCCAAAT 59.710 41.667 0.00 0.00 46.12 2.32
1338 1897 9.661563 CCTACAATGGAAGTAAACATGTTAGTA 57.338 33.333 12.39 0.00 0.00 1.82
1339 1898 8.161425 ACCTACAATGGAAGTAAACATGTTAGT 58.839 33.333 12.39 0.00 0.00 2.24
1340 1899 8.561738 ACCTACAATGGAAGTAAACATGTTAG 57.438 34.615 12.39 0.36 0.00 2.34
1342 1901 8.789762 GTTACCTACAATGGAAGTAAACATGTT 58.210 33.333 4.92 4.92 0.00 2.71
1343 1902 7.940137 TGTTACCTACAATGGAAGTAAACATGT 59.060 33.333 0.00 0.00 32.64 3.21
1344 1903 8.330466 TGTTACCTACAATGGAAGTAAACATG 57.670 34.615 0.00 0.00 32.64 3.21
1350 1909 9.621629 CCAAATATGTTACCTACAATGGAAGTA 57.378 33.333 0.00 0.00 40.89 2.24
1351 1910 8.113462 ACCAAATATGTTACCTACAATGGAAGT 58.887 33.333 0.00 0.00 40.89 3.01
1352 1911 8.519799 ACCAAATATGTTACCTACAATGGAAG 57.480 34.615 0.00 0.00 40.89 3.46
1353 1912 8.887264 AACCAAATATGTTACCTACAATGGAA 57.113 30.769 0.00 0.00 40.89 3.53
1354 1913 8.887264 AAACCAAATATGTTACCTACAATGGA 57.113 30.769 0.00 0.00 40.89 3.41
1355 1914 8.744652 TGAAACCAAATATGTTACCTACAATGG 58.255 33.333 0.00 0.00 40.89 3.16
1359 1918 8.301002 GCTTTGAAACCAAATATGTTACCTACA 58.699 33.333 0.00 0.00 35.75 2.74
1360 1919 7.758076 GGCTTTGAAACCAAATATGTTACCTAC 59.242 37.037 0.00 0.00 33.55 3.18
1361 1920 7.093684 GGGCTTTGAAACCAAATATGTTACCTA 60.094 37.037 0.00 0.00 33.55 3.08
1362 1921 6.295632 GGGCTTTGAAACCAAATATGTTACCT 60.296 38.462 0.00 0.00 33.55 3.08
1363 1922 5.872617 GGGCTTTGAAACCAAATATGTTACC 59.127 40.000 0.00 0.00 33.55 2.85
1364 1923 6.697395 AGGGCTTTGAAACCAAATATGTTAC 58.303 36.000 0.00 0.00 33.55 2.50
1365 1924 6.926630 AGGGCTTTGAAACCAAATATGTTA 57.073 33.333 0.00 0.00 33.55 2.41
1366 1925 5.823861 AGGGCTTTGAAACCAAATATGTT 57.176 34.783 0.00 0.00 33.55 2.71
1367 1926 5.105917 CGTAGGGCTTTGAAACCAAATATGT 60.106 40.000 0.00 0.00 33.55 2.29
1368 1927 5.105917 ACGTAGGGCTTTGAAACCAAATATG 60.106 40.000 0.00 0.00 33.55 1.78
1369 1928 5.014202 ACGTAGGGCTTTGAAACCAAATAT 58.986 37.500 0.00 0.00 33.55 1.28
1370 1929 4.216687 CACGTAGGGCTTTGAAACCAAATA 59.783 41.667 0.00 0.00 33.55 1.40
1371 1930 3.005367 CACGTAGGGCTTTGAAACCAAAT 59.995 43.478 0.00 0.00 33.55 2.32
1372 1931 2.359531 CACGTAGGGCTTTGAAACCAAA 59.640 45.455 0.00 0.00 33.04 3.28
1373 1932 1.950909 CACGTAGGGCTTTGAAACCAA 59.049 47.619 0.00 0.00 0.00 3.67
1374 1933 1.600023 CACGTAGGGCTTTGAAACCA 58.400 50.000 0.00 0.00 0.00 3.67
1375 1934 0.240145 GCACGTAGGGCTTTGAAACC 59.760 55.000 0.00 0.00 0.00 3.27
1376 1935 1.197036 GAGCACGTAGGGCTTTGAAAC 59.803 52.381 0.00 0.00 42.78 2.78
1377 1936 1.071699 AGAGCACGTAGGGCTTTGAAA 59.928 47.619 0.00 0.00 42.78 2.69
1378 1937 0.685097 AGAGCACGTAGGGCTTTGAA 59.315 50.000 0.00 0.00 42.78 2.69
1379 1938 1.203994 GTAGAGCACGTAGGGCTTTGA 59.796 52.381 0.00 0.00 42.78 2.69
1380 1939 1.641577 GTAGAGCACGTAGGGCTTTG 58.358 55.000 0.00 0.00 42.78 2.77
1381 1940 0.172803 CGTAGAGCACGTAGGGCTTT 59.827 55.000 0.00 0.00 45.82 3.51
1382 1941 1.807886 CGTAGAGCACGTAGGGCTT 59.192 57.895 0.00 0.00 45.82 4.35
1383 1942 3.510846 CGTAGAGCACGTAGGGCT 58.489 61.111 0.00 0.00 45.82 5.19
1391 1950 2.166664 AGATCCTCCAAACGTAGAGCAC 59.833 50.000 0.00 0.00 0.00 4.40
1392 1951 2.457598 AGATCCTCCAAACGTAGAGCA 58.542 47.619 0.00 0.00 0.00 4.26
1393 1952 3.548415 CGTAGATCCTCCAAACGTAGAGC 60.548 52.174 0.00 0.00 0.00 4.09
1394 1953 3.875727 TCGTAGATCCTCCAAACGTAGAG 59.124 47.826 0.00 0.00 35.21 2.43
1395 1954 3.877559 TCGTAGATCCTCCAAACGTAGA 58.122 45.455 0.00 0.00 35.21 2.59
1396 1955 4.627611 TTCGTAGATCCTCCAAACGTAG 57.372 45.455 0.00 0.00 35.04 3.51
1397 1956 5.450965 GGAATTCGTAGATCCTCCAAACGTA 60.451 44.000 0.00 0.00 33.18 3.57
1398 1957 4.430908 GAATTCGTAGATCCTCCAAACGT 58.569 43.478 0.00 0.00 35.04 3.99
1399 1958 3.802685 GGAATTCGTAGATCCTCCAAACG 59.197 47.826 0.00 0.00 33.18 3.60
1400 1959 4.127907 GGGAATTCGTAGATCCTCCAAAC 58.872 47.826 0.00 0.00 36.06 2.93
1401 1960 3.135895 GGGGAATTCGTAGATCCTCCAAA 59.864 47.826 0.00 0.00 36.06 3.28
1402 1961 2.704065 GGGGAATTCGTAGATCCTCCAA 59.296 50.000 0.00 0.00 36.06 3.53
1403 1962 2.326428 GGGGAATTCGTAGATCCTCCA 58.674 52.381 0.00 0.00 36.06 3.86
1405 1964 2.610873 AGGGGGAATTCGTAGATCCTC 58.389 52.381 0.00 0.00 35.50 3.71
1406 1965 2.797285 AGGGGGAATTCGTAGATCCT 57.203 50.000 0.00 0.00 36.06 3.24
1407 1966 3.508426 AGTAGGGGGAATTCGTAGATCC 58.492 50.000 0.00 0.00 35.08 3.36
1408 1967 6.854091 ATAAGTAGGGGGAATTCGTAGATC 57.146 41.667 0.00 0.00 35.04 2.75
1409 1968 6.785963 TGAATAAGTAGGGGGAATTCGTAGAT 59.214 38.462 0.00 0.00 35.04 1.98
1410 1969 6.138263 TGAATAAGTAGGGGGAATTCGTAGA 58.862 40.000 0.00 0.00 30.79 2.59
1411 1970 6.415206 TGAATAAGTAGGGGGAATTCGTAG 57.585 41.667 0.00 0.00 30.79 3.51
1412 1971 6.811634 TTGAATAAGTAGGGGGAATTCGTA 57.188 37.500 0.00 0.00 30.79 3.43
1413 1972 5.703730 TTGAATAAGTAGGGGGAATTCGT 57.296 39.130 0.00 0.00 30.79 3.85
1414 1973 7.122204 AGTTTTTGAATAAGTAGGGGGAATTCG 59.878 37.037 0.00 0.00 30.79 3.34
1415 1974 8.362464 AGTTTTTGAATAAGTAGGGGGAATTC 57.638 34.615 0.00 0.00 0.00 2.17
1416 1975 8.736097 AAGTTTTTGAATAAGTAGGGGGAATT 57.264 30.769 0.00 0.00 0.00 2.17
1417 1976 8.736097 AAAGTTTTTGAATAAGTAGGGGGAAT 57.264 30.769 0.00 0.00 0.00 3.01
1418 1977 7.233962 GGAAAGTTTTTGAATAAGTAGGGGGAA 59.766 37.037 0.00 0.00 0.00 3.97
1419 1978 6.722590 GGAAAGTTTTTGAATAAGTAGGGGGA 59.277 38.462 0.00 0.00 0.00 4.81
1420 1979 6.495526 TGGAAAGTTTTTGAATAAGTAGGGGG 59.504 38.462 0.00 0.00 0.00 5.40
1421 1980 7.533289 TGGAAAGTTTTTGAATAAGTAGGGG 57.467 36.000 0.00 0.00 0.00 4.79
1422 1981 8.088365 CCTTGGAAAGTTTTTGAATAAGTAGGG 58.912 37.037 0.00 0.00 44.25 3.53
1423 1982 7.598869 GCCTTGGAAAGTTTTTGAATAAGTAGG 59.401 37.037 0.00 0.00 44.25 3.18
1424 1983 7.598869 GGCCTTGGAAAGTTTTTGAATAAGTAG 59.401 37.037 0.00 0.00 44.25 2.57
1425 1984 7.438564 GGCCTTGGAAAGTTTTTGAATAAGTA 58.561 34.615 0.00 0.00 44.25 2.24
1426 1985 6.288294 GGCCTTGGAAAGTTTTTGAATAAGT 58.712 36.000 0.00 0.00 44.25 2.24
1427 1986 5.700832 GGGCCTTGGAAAGTTTTTGAATAAG 59.299 40.000 0.84 0.00 44.25 1.73
1428 1987 5.616270 GGGCCTTGGAAAGTTTTTGAATAA 58.384 37.500 0.84 0.00 44.25 1.40
1429 1988 4.262249 CGGGCCTTGGAAAGTTTTTGAATA 60.262 41.667 0.84 0.00 44.25 1.75
1430 1989 3.494223 CGGGCCTTGGAAAGTTTTTGAAT 60.494 43.478 0.84 0.00 44.25 2.57
1431 1990 2.159028 CGGGCCTTGGAAAGTTTTTGAA 60.159 45.455 0.84 0.00 44.25 2.69
1432 1991 1.410882 CGGGCCTTGGAAAGTTTTTGA 59.589 47.619 0.84 0.00 44.25 2.69
1433 1992 1.864565 CGGGCCTTGGAAAGTTTTTG 58.135 50.000 0.84 0.00 44.25 2.44
1434 1993 0.105964 GCGGGCCTTGGAAAGTTTTT 59.894 50.000 0.84 0.00 44.25 1.94
1435 1994 1.745890 GCGGGCCTTGGAAAGTTTT 59.254 52.632 0.84 0.00 44.25 2.43
1436 1995 2.207229 GGCGGGCCTTGGAAAGTTT 61.207 57.895 0.84 0.00 44.25 2.66
1437 1996 2.600470 GGCGGGCCTTGGAAAGTT 60.600 61.111 0.84 0.00 44.25 2.66
1438 1997 3.580319 AGGCGGGCCTTGGAAAGT 61.580 61.111 6.34 0.00 45.70 2.66
1447 2006 2.032681 GATACCATGAGGCGGGCC 59.967 66.667 0.18 0.18 39.06 5.80
1448 2007 2.032681 GGATACCATGAGGCGGGC 59.967 66.667 0.00 0.00 39.06 6.13
1449 2008 0.250467 CTTGGATACCATGAGGCGGG 60.250 60.000 0.00 0.00 39.06 6.13
1450 2009 0.469917 ACTTGGATACCATGAGGCGG 59.530 55.000 9.97 0.00 39.06 6.13
1451 2010 1.942657 CAACTTGGATACCATGAGGCG 59.057 52.381 9.97 0.00 39.06 5.52
1452 2011 3.281727 TCAACTTGGATACCATGAGGC 57.718 47.619 9.97 0.00 39.06 4.70
1453 2012 5.500234 TCTTTCAACTTGGATACCATGAGG 58.500 41.667 9.97 0.00 42.21 3.86
1454 2013 6.409704 TCTCTTTCAACTTGGATACCATGAG 58.590 40.000 9.97 0.29 33.58 2.90
1455 2014 6.373005 TCTCTTTCAACTTGGATACCATGA 57.627 37.500 9.97 0.55 33.58 3.07
1456 2015 8.737168 TTATCTCTTTCAACTTGGATACCATG 57.263 34.615 0.00 0.00 35.21 3.66
1457 2016 8.552296 ACTTATCTCTTTCAACTTGGATACCAT 58.448 33.333 0.00 0.00 31.53 3.55
1458 2017 7.918076 ACTTATCTCTTTCAACTTGGATACCA 58.082 34.615 0.00 0.00 0.00 3.25
1459 2018 8.669243 CAACTTATCTCTTTCAACTTGGATACC 58.331 37.037 0.00 0.00 0.00 2.73
1460 2019 9.436957 TCAACTTATCTCTTTCAACTTGGATAC 57.563 33.333 0.00 0.00 0.00 2.24
1462 2021 8.787852 GTTCAACTTATCTCTTTCAACTTGGAT 58.212 33.333 0.00 0.00 0.00 3.41
1463 2022 7.773224 TGTTCAACTTATCTCTTTCAACTTGGA 59.227 33.333 0.00 0.00 0.00 3.53
1464 2023 7.930217 TGTTCAACTTATCTCTTTCAACTTGG 58.070 34.615 0.00 0.00 0.00 3.61
1465 2024 9.443283 CTTGTTCAACTTATCTCTTTCAACTTG 57.557 33.333 0.00 0.00 0.00 3.16
1466 2025 9.178758 ACTTGTTCAACTTATCTCTTTCAACTT 57.821 29.630 0.00 0.00 0.00 2.66
1467 2026 8.738645 ACTTGTTCAACTTATCTCTTTCAACT 57.261 30.769 0.00 0.00 0.00 3.16
1470 2029 9.219603 CCATACTTGTTCAACTTATCTCTTTCA 57.780 33.333 0.00 0.00 0.00 2.69
1471 2030 9.220767 ACCATACTTGTTCAACTTATCTCTTTC 57.779 33.333 0.00 0.00 0.00 2.62
1472 2031 9.220767 GACCATACTTGTTCAACTTATCTCTTT 57.779 33.333 0.00 0.00 0.00 2.52
1473 2032 7.545965 CGACCATACTTGTTCAACTTATCTCTT 59.454 37.037 0.00 0.00 0.00 2.85
1474 2033 7.036220 CGACCATACTTGTTCAACTTATCTCT 58.964 38.462 0.00 0.00 0.00 3.10
1475 2034 6.812160 ACGACCATACTTGTTCAACTTATCTC 59.188 38.462 0.00 0.00 0.00 2.75
1476 2035 6.698380 ACGACCATACTTGTTCAACTTATCT 58.302 36.000 0.00 0.00 0.00 1.98
1477 2036 6.035758 GGACGACCATACTTGTTCAACTTATC 59.964 42.308 0.00 0.00 35.97 1.75
1478 2037 5.873164 GGACGACCATACTTGTTCAACTTAT 59.127 40.000 0.00 0.00 35.97 1.73
1479 2038 5.011329 AGGACGACCATACTTGTTCAACTTA 59.989 40.000 6.71 0.00 38.94 2.24
1480 2039 4.062991 GGACGACCATACTTGTTCAACTT 58.937 43.478 0.00 0.00 35.97 2.66
1481 2040 3.323979 AGGACGACCATACTTGTTCAACT 59.676 43.478 6.71 0.00 38.94 3.16
1482 2041 3.660865 AGGACGACCATACTTGTTCAAC 58.339 45.455 6.71 0.00 38.94 3.18
1483 2042 4.345859 AAGGACGACCATACTTGTTCAA 57.654 40.909 6.71 0.00 38.94 2.69
1484 2043 4.345859 AAAGGACGACCATACTTGTTCA 57.654 40.909 6.71 0.00 38.94 3.18
1485 2044 6.183360 CCAATAAAGGACGACCATACTTGTTC 60.183 42.308 6.71 0.00 38.94 3.18
1486 2045 5.646360 CCAATAAAGGACGACCATACTTGTT 59.354 40.000 6.71 0.00 38.94 2.83
1487 2046 5.183228 CCAATAAAGGACGACCATACTTGT 58.817 41.667 6.71 0.00 38.94 3.16
1488 2047 4.574828 CCCAATAAAGGACGACCATACTTG 59.425 45.833 6.71 4.77 38.94 3.16
1489 2048 4.472108 TCCCAATAAAGGACGACCATACTT 59.528 41.667 6.71 0.00 38.94 2.24
1490 2049 4.035112 TCCCAATAAAGGACGACCATACT 58.965 43.478 6.71 0.00 38.94 2.12
1491 2050 4.411256 TCCCAATAAAGGACGACCATAC 57.589 45.455 6.71 0.00 38.94 2.39
1492 2051 4.410883 ACATCCCAATAAAGGACGACCATA 59.589 41.667 6.71 0.00 35.85 2.74
1493 2052 3.202151 ACATCCCAATAAAGGACGACCAT 59.798 43.478 6.71 0.00 35.85 3.55
1494 2053 2.574369 ACATCCCAATAAAGGACGACCA 59.426 45.455 6.71 0.00 35.85 4.02
1495 2054 3.277142 ACATCCCAATAAAGGACGACC 57.723 47.619 0.00 0.00 35.85 4.79
1496 2055 5.019785 AGTACATCCCAATAAAGGACGAC 57.980 43.478 0.00 0.00 35.85 4.34
1497 2056 6.989155 ATAGTACATCCCAATAAAGGACGA 57.011 37.500 0.00 0.00 35.85 4.20
1498 2057 9.550406 TTTAATAGTACATCCCAATAAAGGACG 57.450 33.333 0.00 0.00 35.85 4.79
1500 2059 9.856162 GGTTTAATAGTACATCCCAATAAAGGA 57.144 33.333 0.00 0.00 37.93 3.36
1501 2060 9.635404 TGGTTTAATAGTACATCCCAATAAAGG 57.365 33.333 0.00 0.00 0.00 3.11
1508 2067 8.754080 CCAATTTTGGTTTAATAGTACATCCCA 58.246 33.333 0.95 0.00 43.43 4.37
1526 2085 6.734104 TTTTTGCGGATAATCCCAATTTTG 57.266 33.333 0.00 0.00 31.13 2.44
1546 2105 8.500753 TCATAACACGCTCTACCATAATTTTT 57.499 30.769 0.00 0.00 0.00 1.94
1547 2106 7.769044 ACTCATAACACGCTCTACCATAATTTT 59.231 33.333 0.00 0.00 0.00 1.82
1548 2107 7.224753 CACTCATAACACGCTCTACCATAATTT 59.775 37.037 0.00 0.00 0.00 1.82
1549 2108 6.701841 CACTCATAACACGCTCTACCATAATT 59.298 38.462 0.00 0.00 0.00 1.40
1550 2109 6.183360 ACACTCATAACACGCTCTACCATAAT 60.183 38.462 0.00 0.00 0.00 1.28
1551 2110 5.126545 ACACTCATAACACGCTCTACCATAA 59.873 40.000 0.00 0.00 0.00 1.90
1552 2111 4.643334 ACACTCATAACACGCTCTACCATA 59.357 41.667 0.00 0.00 0.00 2.74
1553 2112 3.447586 ACACTCATAACACGCTCTACCAT 59.552 43.478 0.00 0.00 0.00 3.55
1554 2113 2.823747 ACACTCATAACACGCTCTACCA 59.176 45.455 0.00 0.00 0.00 3.25
1555 2114 3.128938 AGACACTCATAACACGCTCTACC 59.871 47.826 0.00 0.00 0.00 3.18
1556 2115 4.358494 AGACACTCATAACACGCTCTAC 57.642 45.455 0.00 0.00 0.00 2.59
1557 2116 4.033702 CGTAGACACTCATAACACGCTCTA 59.966 45.833 0.00 0.00 0.00 2.43
1558 2117 3.181509 CGTAGACACTCATAACACGCTCT 60.182 47.826 0.00 0.00 0.00 4.09
1559 2118 3.099362 CGTAGACACTCATAACACGCTC 58.901 50.000 0.00 0.00 0.00 5.03
1560 2119 2.486982 ACGTAGACACTCATAACACGCT 59.513 45.455 0.00 0.00 0.00 5.07
1561 2120 2.592897 CACGTAGACACTCATAACACGC 59.407 50.000 0.00 0.00 0.00 5.34
1562 2121 3.168963 CCACGTAGACACTCATAACACG 58.831 50.000 0.00 0.00 0.00 4.49
1563 2122 3.918591 CACCACGTAGACACTCATAACAC 59.081 47.826 0.00 0.00 0.00 3.32
1564 2123 3.057104 CCACCACGTAGACACTCATAACA 60.057 47.826 0.00 0.00 0.00 2.41
1565 2124 3.192001 TCCACCACGTAGACACTCATAAC 59.808 47.826 0.00 0.00 0.00 1.89
1566 2125 3.192001 GTCCACCACGTAGACACTCATAA 59.808 47.826 0.00 0.00 0.00 1.90
1567 2126 2.751259 GTCCACCACGTAGACACTCATA 59.249 50.000 0.00 0.00 0.00 2.15
1568 2127 1.544691 GTCCACCACGTAGACACTCAT 59.455 52.381 0.00 0.00 0.00 2.90
1569 2128 0.956633 GTCCACCACGTAGACACTCA 59.043 55.000 0.00 0.00 0.00 3.41
1570 2129 1.245732 AGTCCACCACGTAGACACTC 58.754 55.000 9.11 0.00 32.82 3.51
1571 2130 1.340248 CAAGTCCACCACGTAGACACT 59.660 52.381 9.11 0.00 32.82 3.55
1572 2131 1.338973 TCAAGTCCACCACGTAGACAC 59.661 52.381 9.11 0.00 32.82 3.67
1573 2132 1.694844 TCAAGTCCACCACGTAGACA 58.305 50.000 9.11 0.00 32.82 3.41
1574 2133 3.314541 AATCAAGTCCACCACGTAGAC 57.685 47.619 0.00 0.00 0.00 2.59
1575 2134 4.345859 AAAATCAAGTCCACCACGTAGA 57.654 40.909 0.00 0.00 0.00 2.59
1576 2135 4.390909 GGTAAAATCAAGTCCACCACGTAG 59.609 45.833 0.00 0.00 0.00 3.51
1577 2136 4.202336 TGGTAAAATCAAGTCCACCACGTA 60.202 41.667 0.00 0.00 31.29 3.57
1578 2137 3.143728 GGTAAAATCAAGTCCACCACGT 58.856 45.455 0.00 0.00 0.00 4.49
1579 2138 3.142951 TGGTAAAATCAAGTCCACCACG 58.857 45.455 0.00 0.00 31.29 4.94
1580 2139 5.300792 TCTTTGGTAAAATCAAGTCCACCAC 59.699 40.000 0.00 0.00 35.86 4.16
1581 2140 5.450453 TCTTTGGTAAAATCAAGTCCACCA 58.550 37.500 0.00 0.00 34.35 4.17
1582 2141 6.208599 TCATCTTTGGTAAAATCAAGTCCACC 59.791 38.462 0.00 0.00 0.00 4.61
1583 2142 7.214467 TCATCTTTGGTAAAATCAAGTCCAC 57.786 36.000 0.00 0.00 0.00 4.02
1584 2143 7.669304 TCATCATCTTTGGTAAAATCAAGTCCA 59.331 33.333 0.00 0.00 0.00 4.02
1585 2144 8.055279 TCATCATCTTTGGTAAAATCAAGTCC 57.945 34.615 0.00 0.00 0.00 3.85
1586 2145 9.912634 TTTCATCATCTTTGGTAAAATCAAGTC 57.087 29.630 0.00 0.00 0.00 3.01
1589 2148 9.190858 CGTTTTCATCATCTTTGGTAAAATCAA 57.809 29.630 0.00 0.00 0.00 2.57
1590 2149 8.356657 ACGTTTTCATCATCTTTGGTAAAATCA 58.643 29.630 0.00 0.00 0.00 2.57
1591 2150 8.742554 ACGTTTTCATCATCTTTGGTAAAATC 57.257 30.769 0.00 0.00 0.00 2.17
1594 2153 9.453325 GTTTACGTTTTCATCATCTTTGGTAAA 57.547 29.630 0.00 0.00 0.00 2.01
1595 2154 8.842280 AGTTTACGTTTTCATCATCTTTGGTAA 58.158 29.630 0.00 0.00 0.00 2.85
1596 2155 8.385898 AGTTTACGTTTTCATCATCTTTGGTA 57.614 30.769 0.00 0.00 0.00 3.25
1597 2156 7.012894 TGAGTTTACGTTTTCATCATCTTTGGT 59.987 33.333 0.00 0.00 0.00 3.67
1598 2157 7.323656 GTGAGTTTACGTTTTCATCATCTTTGG 59.676 37.037 0.00 0.00 0.00 3.28
1599 2158 7.855409 TGTGAGTTTACGTTTTCATCATCTTTG 59.145 33.333 0.00 0.00 0.00 2.77
1600 2159 7.925993 TGTGAGTTTACGTTTTCATCATCTTT 58.074 30.769 0.00 0.00 0.00 2.52
1601 2160 7.490962 TGTGAGTTTACGTTTTCATCATCTT 57.509 32.000 0.00 0.00 0.00 2.40
1602 2161 7.352739 GTTGTGAGTTTACGTTTTCATCATCT 58.647 34.615 0.00 0.00 0.00 2.90
1603 2162 6.577427 GGTTGTGAGTTTACGTTTTCATCATC 59.423 38.462 0.00 0.00 0.00 2.92
1604 2163 6.038825 TGGTTGTGAGTTTACGTTTTCATCAT 59.961 34.615 0.00 0.00 0.00 2.45
1605 2164 5.354513 TGGTTGTGAGTTTACGTTTTCATCA 59.645 36.000 0.00 0.00 0.00 3.07
1606 2165 5.812652 TGGTTGTGAGTTTACGTTTTCATC 58.187 37.500 0.00 0.00 0.00 2.92
1607 2166 5.821516 TGGTTGTGAGTTTACGTTTTCAT 57.178 34.783 0.00 0.00 0.00 2.57
1608 2167 5.821516 ATGGTTGTGAGTTTACGTTTTCA 57.178 34.783 0.00 0.00 0.00 2.69
1609 2168 8.687301 CATAAATGGTTGTGAGTTTACGTTTTC 58.313 33.333 0.00 0.00 0.00 2.29
1610 2169 7.168469 GCATAAATGGTTGTGAGTTTACGTTTT 59.832 33.333 0.00 0.00 0.00 2.43
1611 2170 6.639279 GCATAAATGGTTGTGAGTTTACGTTT 59.361 34.615 0.00 0.00 0.00 3.60
1612 2171 6.146898 GCATAAATGGTTGTGAGTTTACGTT 58.853 36.000 0.00 0.00 0.00 3.99
1613 2172 5.615984 CGCATAAATGGTTGTGAGTTTACGT 60.616 40.000 0.00 0.00 0.00 3.57
1614 2173 4.786068 CGCATAAATGGTTGTGAGTTTACG 59.214 41.667 0.00 0.00 0.00 3.18
1615 2174 4.557301 GCGCATAAATGGTTGTGAGTTTAC 59.443 41.667 0.30 0.00 30.11 2.01
1616 2175 4.457603 AGCGCATAAATGGTTGTGAGTTTA 59.542 37.500 11.47 0.00 30.11 2.01
1617 2176 3.255642 AGCGCATAAATGGTTGTGAGTTT 59.744 39.130 11.47 0.00 30.11 2.66
1618 2177 2.819608 AGCGCATAAATGGTTGTGAGTT 59.180 40.909 11.47 0.00 30.11 3.01
1619 2178 2.162208 CAGCGCATAAATGGTTGTGAGT 59.838 45.455 11.47 0.00 30.11 3.41
1620 2179 2.478370 CCAGCGCATAAATGGTTGTGAG 60.478 50.000 11.47 0.00 0.00 3.51
1621 2180 1.472082 CCAGCGCATAAATGGTTGTGA 59.528 47.619 11.47 0.00 0.00 3.58
1622 2181 1.472082 TCCAGCGCATAAATGGTTGTG 59.528 47.619 11.47 0.00 35.51 3.33
1623 2182 1.745087 CTCCAGCGCATAAATGGTTGT 59.255 47.619 11.47 0.00 35.51 3.32
1624 2183 2.016318 TCTCCAGCGCATAAATGGTTG 58.984 47.619 11.47 6.15 35.51 3.77
1625 2184 2.092968 TCTCTCCAGCGCATAAATGGTT 60.093 45.455 11.47 0.00 35.51 3.67
1626 2185 1.486310 TCTCTCCAGCGCATAAATGGT 59.514 47.619 11.47 0.00 35.51 3.55
1627 2186 1.869767 GTCTCTCCAGCGCATAAATGG 59.130 52.381 11.47 8.47 35.30 3.16
1628 2187 1.869767 GGTCTCTCCAGCGCATAAATG 59.130 52.381 11.47 0.00 35.97 2.32
1629 2188 1.539065 CGGTCTCTCCAGCGCATAAAT 60.539 52.381 11.47 0.00 35.57 1.40
1630 2189 0.179111 CGGTCTCTCCAGCGCATAAA 60.179 55.000 11.47 0.00 35.57 1.40
1631 2190 1.320344 ACGGTCTCTCCAGCGCATAA 61.320 55.000 11.47 0.00 41.01 1.90
1632 2191 1.320344 AACGGTCTCTCCAGCGCATA 61.320 55.000 11.47 0.00 41.01 3.14
1633 2192 2.172483 AAACGGTCTCTCCAGCGCAT 62.172 55.000 11.47 0.00 41.01 4.73
1634 2193 2.377628 AAAACGGTCTCTCCAGCGCA 62.378 55.000 11.47 0.00 41.01 6.09
1635 2194 1.668151 AAAACGGTCTCTCCAGCGC 60.668 57.895 0.00 0.00 41.01 5.92
1636 2195 0.600255 ACAAAACGGTCTCTCCAGCG 60.600 55.000 0.00 0.00 42.99 5.18
1637 2196 1.149148 GACAAAACGGTCTCTCCAGC 58.851 55.000 0.00 0.00 34.92 4.85
1638 2197 2.821991 AGACAAAACGGTCTCTCCAG 57.178 50.000 0.00 0.00 44.63 3.86
1645 2204 2.190161 GGCACAAAAGACAAAACGGTC 58.810 47.619 0.00 0.00 38.08 4.79
1646 2205 1.468395 CGGCACAAAAGACAAAACGGT 60.468 47.619 0.00 0.00 0.00 4.83
1647 2206 1.196200 CGGCACAAAAGACAAAACGG 58.804 50.000 0.00 0.00 0.00 4.44
1648 2207 2.181426 TCGGCACAAAAGACAAAACG 57.819 45.000 0.00 0.00 0.00 3.60
1649 2208 2.281498 GCTTCGGCACAAAAGACAAAAC 59.719 45.455 0.00 0.00 41.33 2.43
1650 2209 2.165437 AGCTTCGGCACAAAAGACAAAA 59.835 40.909 0.00 0.00 44.74 2.44
1651 2210 1.748493 AGCTTCGGCACAAAAGACAAA 59.252 42.857 0.00 0.00 44.74 2.83
1652 2211 1.388547 AGCTTCGGCACAAAAGACAA 58.611 45.000 0.00 0.00 44.74 3.18
1653 2212 2.248280 TAGCTTCGGCACAAAAGACA 57.752 45.000 0.00 0.00 44.74 3.41
1654 2213 3.831715 AATAGCTTCGGCACAAAAGAC 57.168 42.857 0.00 0.00 44.74 3.01
1655 2214 7.618502 TTATAAATAGCTTCGGCACAAAAGA 57.381 32.000 0.00 0.00 44.74 2.52
1656 2215 8.856490 ATTTATAAATAGCTTCGGCACAAAAG 57.144 30.769 8.99 0.00 44.74 2.27
1657 2216 8.462811 TGATTTATAAATAGCTTCGGCACAAAA 58.537 29.630 10.68 0.00 44.74 2.44
1658 2217 7.913297 GTGATTTATAAATAGCTTCGGCACAAA 59.087 33.333 10.68 0.00 44.74 2.83
1659 2218 7.066404 TGTGATTTATAAATAGCTTCGGCACAA 59.934 33.333 16.52 6.56 44.74 3.33
1660 2219 6.540551 TGTGATTTATAAATAGCTTCGGCACA 59.459 34.615 10.68 13.69 44.74 4.57
1661 2220 6.954944 TGTGATTTATAAATAGCTTCGGCAC 58.045 36.000 10.68 11.61 44.74 5.01
1662 2221 6.204688 CCTGTGATTTATAAATAGCTTCGGCA 59.795 38.462 10.68 0.00 44.74 5.69
1663 2222 6.603095 CCTGTGATTTATAAATAGCTTCGGC 58.397 40.000 10.68 0.00 42.17 5.54
1664 2223 6.348540 GGCCTGTGATTTATAAATAGCTTCGG 60.349 42.308 10.68 8.08 0.00 4.30
1665 2224 6.603095 GGCCTGTGATTTATAAATAGCTTCG 58.397 40.000 10.68 0.00 0.00 3.79
1666 2225 6.426937 TCGGCCTGTGATTTATAAATAGCTTC 59.573 38.462 10.68 0.16 0.00 3.86
1667 2226 6.296026 TCGGCCTGTGATTTATAAATAGCTT 58.704 36.000 10.68 0.00 0.00 3.74
1668 2227 5.865085 TCGGCCTGTGATTTATAAATAGCT 58.135 37.500 10.68 0.00 0.00 3.32
1669 2228 6.554334 TTCGGCCTGTGATTTATAAATAGC 57.446 37.500 10.68 8.77 0.00 2.97
1670 2229 7.360361 GGTTTCGGCCTGTGATTTATAAATAG 58.640 38.462 10.68 5.27 0.00 1.73
1671 2230 6.017770 CGGTTTCGGCCTGTGATTTATAAATA 60.018 38.462 10.68 0.00 0.00 1.40
1672 2231 5.220970 CGGTTTCGGCCTGTGATTTATAAAT 60.221 40.000 10.51 10.51 0.00 1.40
1673 2232 4.095185 CGGTTTCGGCCTGTGATTTATAAA 59.905 41.667 0.00 0.00 0.00 1.40
1674 2233 3.623960 CGGTTTCGGCCTGTGATTTATAA 59.376 43.478 0.00 0.00 0.00 0.98
1675 2234 3.199677 CGGTTTCGGCCTGTGATTTATA 58.800 45.455 0.00 0.00 0.00 0.98
1676 2235 2.014128 CGGTTTCGGCCTGTGATTTAT 58.986 47.619 0.00 0.00 0.00 1.40
1677 2236 1.444836 CGGTTTCGGCCTGTGATTTA 58.555 50.000 0.00 0.00 0.00 1.40
1678 2237 2.253513 CGGTTTCGGCCTGTGATTT 58.746 52.632 0.00 0.00 0.00 2.17
1679 2238 3.981308 CGGTTTCGGCCTGTGATT 58.019 55.556 0.00 0.00 0.00 2.57
1689 2248 1.199097 CCCTTGATTTCACCGGTTTCG 59.801 52.381 2.97 0.00 0.00 3.46
1690 2249 1.544246 CCCCTTGATTTCACCGGTTTC 59.456 52.381 2.97 0.00 0.00 2.78
1691 2250 1.627864 CCCCTTGATTTCACCGGTTT 58.372 50.000 2.97 0.00 0.00 3.27
1692 2251 0.898326 GCCCCTTGATTTCACCGGTT 60.898 55.000 2.97 0.00 0.00 4.44
1693 2252 1.304134 GCCCCTTGATTTCACCGGT 60.304 57.895 0.00 0.00 0.00 5.28
1694 2253 0.684153 ATGCCCCTTGATTTCACCGG 60.684 55.000 0.00 0.00 0.00 5.28
1695 2254 1.185315 AATGCCCCTTGATTTCACCG 58.815 50.000 0.00 0.00 0.00 4.94
1696 2255 3.365472 AGTAATGCCCCTTGATTTCACC 58.635 45.455 0.00 0.00 0.00 4.02
1697 2256 4.462483 TCAAGTAATGCCCCTTGATTTCAC 59.538 41.667 0.00 0.00 41.47 3.18
1698 2257 4.671831 TCAAGTAATGCCCCTTGATTTCA 58.328 39.130 0.00 0.00 41.47 2.69
1699 2258 5.659440 TTCAAGTAATGCCCCTTGATTTC 57.341 39.130 3.22 0.00 44.64 2.17
1700 2259 5.981174 CATTCAAGTAATGCCCCTTGATTT 58.019 37.500 3.22 0.00 44.64 2.17
1701 2260 5.603170 CATTCAAGTAATGCCCCTTGATT 57.397 39.130 3.22 0.00 44.64 2.57
1711 2270 2.537529 CCGCAGTCGCATTCAAGTAATG 60.538 50.000 0.00 0.00 46.62 1.90
1712 2271 1.665679 CCGCAGTCGCATTCAAGTAAT 59.334 47.619 0.00 0.00 38.40 1.89
1713 2272 1.075542 CCGCAGTCGCATTCAAGTAA 58.924 50.000 0.00 0.00 38.40 2.24
1714 2273 0.739462 CCCGCAGTCGCATTCAAGTA 60.739 55.000 0.00 0.00 38.40 2.24
1715 2274 2.034879 CCCGCAGTCGCATTCAAGT 61.035 57.895 0.00 0.00 38.40 3.16
1716 2275 0.739462 TACCCGCAGTCGCATTCAAG 60.739 55.000 0.00 0.00 38.40 3.02
1717 2276 1.017177 GTACCCGCAGTCGCATTCAA 61.017 55.000 0.00 0.00 38.40 2.69
1718 2277 1.447140 GTACCCGCAGTCGCATTCA 60.447 57.895 0.00 0.00 38.40 2.57
1719 2278 0.810031 ATGTACCCGCAGTCGCATTC 60.810 55.000 0.00 0.00 38.40 2.67
1720 2279 1.089481 CATGTACCCGCAGTCGCATT 61.089 55.000 0.00 0.00 38.40 3.56
1721 2280 1.521457 CATGTACCCGCAGTCGCAT 60.521 57.895 0.00 0.00 38.40 4.73
1722 2281 2.125713 CATGTACCCGCAGTCGCA 60.126 61.111 0.00 0.00 38.40 5.10
1723 2282 2.890474 CCATGTACCCGCAGTCGC 60.890 66.667 0.00 0.00 0.00 5.19
1724 2283 1.518572 GTCCATGTACCCGCAGTCG 60.519 63.158 0.00 0.00 0.00 4.18
1725 2284 0.036765 TTGTCCATGTACCCGCAGTC 60.037 55.000 0.00 0.00 0.00 3.51
1726 2285 0.321298 GTTGTCCATGTACCCGCAGT 60.321 55.000 0.00 0.00 0.00 4.40
1727 2286 0.036388 AGTTGTCCATGTACCCGCAG 60.036 55.000 0.00 0.00 0.00 5.18
1728 2287 0.321210 CAGTTGTCCATGTACCCGCA 60.321 55.000 0.00 0.00 0.00 5.69
1729 2288 0.321298 ACAGTTGTCCATGTACCCGC 60.321 55.000 0.00 0.00 0.00 6.13
1730 2289 2.178912 AACAGTTGTCCATGTACCCG 57.821 50.000 0.00 0.00 0.00 5.28
1731 2290 2.556622 CCAAACAGTTGTCCATGTACCC 59.443 50.000 0.00 0.00 32.40 3.69
1732 2291 3.252458 GTCCAAACAGTTGTCCATGTACC 59.748 47.826 0.00 0.00 32.40 3.34
1733 2292 4.024048 CAGTCCAAACAGTTGTCCATGTAC 60.024 45.833 0.00 0.00 32.40 2.90
1734 2293 4.133820 CAGTCCAAACAGTTGTCCATGTA 58.866 43.478 0.00 0.00 32.40 2.29
1735 2294 2.951642 CAGTCCAAACAGTTGTCCATGT 59.048 45.455 0.00 0.00 32.40 3.21
1736 2295 3.213506 TCAGTCCAAACAGTTGTCCATG 58.786 45.455 0.00 0.00 32.40 3.66
1737 2296 3.576078 TCAGTCCAAACAGTTGTCCAT 57.424 42.857 0.00 0.00 32.40 3.41
1738 2297 3.213506 CATCAGTCCAAACAGTTGTCCA 58.786 45.455 0.00 0.00 32.40 4.02
1739 2298 2.554032 CCATCAGTCCAAACAGTTGTCC 59.446 50.000 0.00 0.00 32.40 4.02
1740 2299 3.251004 GTCCATCAGTCCAAACAGTTGTC 59.749 47.826 0.00 0.00 32.40 3.18
1741 2300 3.117888 AGTCCATCAGTCCAAACAGTTGT 60.118 43.478 0.00 0.00 32.40 3.32
1742 2301 3.480470 AGTCCATCAGTCCAAACAGTTG 58.520 45.455 0.00 0.00 34.25 3.16
1743 2302 3.864789 AGTCCATCAGTCCAAACAGTT 57.135 42.857 0.00 0.00 0.00 3.16
1744 2303 3.864789 AAGTCCATCAGTCCAAACAGT 57.135 42.857 0.00 0.00 0.00 3.55
1745 2304 4.003648 GGTAAGTCCATCAGTCCAAACAG 58.996 47.826 0.00 0.00 35.97 3.16
1746 2305 3.392947 TGGTAAGTCCATCAGTCCAAACA 59.607 43.478 0.00 0.00 41.93 2.83
1747 2306 4.003648 CTGGTAAGTCCATCAGTCCAAAC 58.996 47.826 0.00 0.00 46.12 2.93
1748 2307 3.650942 ACTGGTAAGTCCATCAGTCCAAA 59.349 43.478 0.00 0.00 46.12 3.28
1749 2308 3.248024 ACTGGTAAGTCCATCAGTCCAA 58.752 45.455 0.00 0.00 46.12 3.53
1750 2309 2.832129 GACTGGTAAGTCCATCAGTCCA 59.168 50.000 10.23 0.00 46.15 4.02
1751 2310 3.528597 GACTGGTAAGTCCATCAGTCC 57.471 52.381 10.23 0.00 46.15 3.85
1761 2320 5.717078 TGTAACGATCAAGACTGGTAAGT 57.283 39.130 0.00 0.00 40.21 2.24
1762 2321 6.090898 CCTTTGTAACGATCAAGACTGGTAAG 59.909 42.308 0.00 0.00 0.00 2.34
1763 2322 5.929992 CCTTTGTAACGATCAAGACTGGTAA 59.070 40.000 0.00 0.00 0.00 2.85
1764 2323 5.244402 TCCTTTGTAACGATCAAGACTGGTA 59.756 40.000 0.00 0.00 0.00 3.25
1765 2324 4.039973 TCCTTTGTAACGATCAAGACTGGT 59.960 41.667 0.00 0.00 0.00 4.00
1766 2325 4.389077 GTCCTTTGTAACGATCAAGACTGG 59.611 45.833 0.00 0.00 0.00 4.00
1767 2326 4.090066 CGTCCTTTGTAACGATCAAGACTG 59.910 45.833 0.00 0.00 41.29 3.51
1768 2327 4.022589 TCGTCCTTTGTAACGATCAAGACT 60.023 41.667 0.00 0.00 42.49 3.24
1769 2328 4.232221 TCGTCCTTTGTAACGATCAAGAC 58.768 43.478 0.00 0.00 42.49 3.01
1770 2329 4.508461 TCGTCCTTTGTAACGATCAAGA 57.492 40.909 0.00 0.00 42.49 3.02
1777 2336 4.026804 GTGATAGCATCGTCCTTTGTAACG 60.027 45.833 0.00 0.00 40.17 3.18
1778 2337 4.868171 TGTGATAGCATCGTCCTTTGTAAC 59.132 41.667 0.00 0.00 0.00 2.50
1779 2338 5.079689 TGTGATAGCATCGTCCTTTGTAA 57.920 39.130 0.00 0.00 0.00 2.41
1780 2339 4.729227 TGTGATAGCATCGTCCTTTGTA 57.271 40.909 0.00 0.00 0.00 2.41
1781 2340 3.610040 TGTGATAGCATCGTCCTTTGT 57.390 42.857 0.00 0.00 0.00 2.83
1782 2341 4.722203 GATGTGATAGCATCGTCCTTTG 57.278 45.455 0.00 0.00 36.34 2.77
1790 2349 2.288702 ACAGGCTCGATGTGATAGCATC 60.289 50.000 0.00 0.00 41.21 3.91
1791 2350 1.690893 ACAGGCTCGATGTGATAGCAT 59.309 47.619 0.00 0.00 38.01 3.79
1792 2351 1.114627 ACAGGCTCGATGTGATAGCA 58.885 50.000 0.00 0.00 38.01 3.49
1793 2352 1.863454 CAACAGGCTCGATGTGATAGC 59.137 52.381 0.00 0.00 35.47 2.97
1794 2353 1.863454 GCAACAGGCTCGATGTGATAG 59.137 52.381 0.00 0.00 40.25 2.08
1795 2354 1.939974 GCAACAGGCTCGATGTGATA 58.060 50.000 0.00 0.00 40.25 2.15
1796 2355 2.772739 GCAACAGGCTCGATGTGAT 58.227 52.632 0.00 0.00 40.25 3.06
1797 2356 4.284123 GCAACAGGCTCGATGTGA 57.716 55.556 0.00 0.00 40.25 3.58
1806 2365 1.973812 GTCTTCCCCAGCAACAGGC 60.974 63.158 0.00 0.00 45.30 4.85
1807 2366 0.607489 CTGTCTTCCCCAGCAACAGG 60.607 60.000 0.00 0.00 34.96 4.00
1808 2367 2.938354 CTGTCTTCCCCAGCAACAG 58.062 57.895 0.00 0.00 0.00 3.16
1814 2373 0.682209 CCATTGGCTGTCTTCCCCAG 60.682 60.000 0.00 0.00 0.00 4.45
1815 2374 1.139498 TCCATTGGCTGTCTTCCCCA 61.139 55.000 0.00 0.00 0.00 4.96
1816 2375 0.259938 ATCCATTGGCTGTCTTCCCC 59.740 55.000 0.00 0.00 0.00 4.81
1817 2376 1.213926 AGATCCATTGGCTGTCTTCCC 59.786 52.381 0.00 0.00 0.00 3.97
1818 2377 2.295885 CAGATCCATTGGCTGTCTTCC 58.704 52.381 0.00 0.00 0.00 3.46
1819 2378 2.996631 ACAGATCCATTGGCTGTCTTC 58.003 47.619 9.44 0.00 38.41 2.87
1820 2379 3.446442 AACAGATCCATTGGCTGTCTT 57.554 42.857 14.12 0.68 41.65 3.01
1821 2380 4.080129 ACATAACAGATCCATTGGCTGTCT 60.080 41.667 14.12 7.57 41.65 3.41
2120 2679 3.187842 GGTAAAATCAAGTCCACCACGTC 59.812 47.826 0.00 0.00 0.00 4.34
2678 3238 4.308526 TGCCAAACATGAATACCACCTA 57.691 40.909 0.00 0.00 0.00 3.08
2794 3354 2.770164 AAAGCCACTCGATTAGCTGT 57.230 45.000 0.00 0.00 35.30 4.40
3310 4413 6.509418 TGATTCTTTCCCAATAAACGAAGG 57.491 37.500 0.00 0.00 0.00 3.46
3461 4564 3.117550 TGCATTGTATGGCCCAGAATAGT 60.118 43.478 0.00 0.00 0.00 2.12
3871 4977 6.817140 CCTACTAAAGGCACGAAAATAGAAGT 59.183 38.462 0.00 0.00 38.97 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.