Multiple sequence alignment - TraesCS3B01G184100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G184100 chr3B 100.000 2300 0 0 1 2300 199227494 199225195 0.000000e+00 4248.0
1 TraesCS3B01G184100 chr3B 94.872 117 4 2 392 508 732824763 732824877 5.050000e-42 182.0
2 TraesCS3B01G184100 chr3B 95.455 44 2 0 99 142 141922738 141922695 1.140000e-08 71.3
3 TraesCS3B01G184100 chr3D 92.016 1215 59 17 596 1797 136568785 136567596 0.000000e+00 1672.0
4 TraesCS3B01G184100 chr3D 92.391 92 5 2 503 593 61193895 61193985 1.850000e-26 130.0
5 TraesCS3B01G184100 chr3D 91.489 94 8 0 503 596 443428409 443428502 1.850000e-26 130.0
6 TraesCS3B01G184100 chr3A 90.683 1288 63 23 751 2010 154384297 154383039 0.000000e+00 1661.0
7 TraesCS3B01G184100 chr3A 83.226 310 42 5 101 401 27305677 27305369 2.250000e-70 276.0
8 TraesCS3B01G184100 chr3A 83.013 312 43 5 99 401 706434142 706434452 8.100000e-70 274.0
9 TraesCS3B01G184100 chr3A 82.759 319 38 9 99 401 464243729 464244046 3.770000e-68 268.0
10 TraesCS3B01G184100 chr3A 90.526 95 8 1 503 597 50160429 50160336 8.630000e-25 124.0
11 TraesCS3B01G184100 chr7B 90.820 305 13 4 2010 2300 624187428 624187125 5.960000e-106 394.0
12 TraesCS3B01G184100 chr7B 88.158 304 21 9 2010 2300 594709999 594710300 4.700000e-92 348.0
13 TraesCS3B01G184100 chr7B 96.429 112 4 0 396 507 479997261 479997150 3.900000e-43 185.0
14 TraesCS3B01G184100 chr5B 94.208 259 12 3 2044 2300 496276718 496276975 2.140000e-105 392.0
15 TraesCS3B01G184100 chr5B 86.275 306 26 12 2010 2300 415791460 415791156 3.690000e-83 318.0
16 TraesCS3B01G184100 chr5B 95.652 115 4 1 390 504 145479140 145479253 1.400000e-42 183.0
17 TraesCS3B01G184100 chr5B 91.603 131 6 4 396 521 678648679 678648549 2.350000e-40 176.0
18 TraesCS3B01G184100 chr5B 91.406 128 10 1 394 521 9228996 9229122 8.450000e-40 174.0
19 TraesCS3B01G184100 chr5B 92.105 38 2 1 596 632 545621021 545620984 4.000000e-03 52.8
20 TraesCS3B01G184100 chr7A 89.968 309 13 11 2010 2300 24472320 24472012 1.290000e-102 383.0
21 TraesCS3B01G184100 chr4B 90.132 304 16 8 2010 2300 9510477 9510175 1.290000e-102 383.0
22 TraesCS3B01G184100 chr2B 90.132 304 14 9 2010 2300 775058289 775058589 4.640000e-102 381.0
23 TraesCS3B01G184100 chr2B 94.828 116 4 2 394 508 99152089 99152203 1.820000e-41 180.0
24 TraesCS3B01G184100 chr4A 89.508 305 18 4 2010 2300 642823367 642823063 7.760000e-100 374.0
25 TraesCS3B01G184100 chr4A 78.896 308 59 6 99 401 323044591 323044285 1.080000e-48 204.0
26 TraesCS3B01G184100 chr4D 89.320 309 14 11 2010 2300 484121235 484120928 1.000000e-98 370.0
27 TraesCS3B01G184100 chr2D 93.902 246 12 2 2052 2297 411754827 411754585 3.610000e-98 368.0
28 TraesCS3B01G184100 chr2D 77.715 534 96 15 70 593 48182744 48182224 2.870000e-79 305.0
29 TraesCS3B01G184100 chr2D 83.548 310 40 8 101 401 52942805 52943112 1.740000e-71 279.0
30 TraesCS3B01G184100 chr5D 86.928 306 26 8 2008 2300 535150684 535150380 4.740000e-87 331.0
31 TraesCS3B01G184100 chr5D 86.364 220 16 7 2010 2216 51512001 51511783 6.390000e-56 228.0
32 TraesCS3B01G184100 chr5D 88.571 140 11 5 392 526 134808267 134808406 5.080000e-37 165.0
33 TraesCS3B01G184100 chr5D 77.104 297 58 10 111 401 232405398 232405106 1.830000e-36 163.0
34 TraesCS3B01G184100 chr5D 77.372 274 58 2 130 399 387619221 387618948 2.370000e-35 159.0
35 TraesCS3B01G184100 chr5D 94.595 37 2 0 2010 2046 104475363 104475399 8.880000e-05 58.4
36 TraesCS3B01G184100 chr1B 85.806 310 26 11 2008 2300 435196502 435196810 1.720000e-81 313.0
37 TraesCS3B01G184100 chr1D 84.665 313 24 13 2010 2300 456128968 456128658 8.040000e-75 291.0
38 TraesCS3B01G184100 chr1D 92.000 125 9 1 385 509 20192745 20192622 8.450000e-40 174.0
39 TraesCS3B01G184100 chr1D 92.391 92 7 0 503 594 202282007 202281916 5.160000e-27 132.0
40 TraesCS3B01G184100 chr7D 79.139 302 46 13 110 401 104589645 104589351 2.330000e-45 193.0
41 TraesCS3B01G184100 chr7D 87.387 111 8 5 489 595 614376128 614376236 3.100000e-24 122.0
42 TraesCS3B01G184100 chr7D 94.595 37 2 0 2010 2046 563745865 563745901 8.880000e-05 58.4
43 TraesCS3B01G184100 chr1A 77.817 284 56 5 99 377 279912161 279912442 3.930000e-38 169.0
44 TraesCS3B01G184100 chr1A 92.222 90 6 1 507 595 1729465 1729554 2.400000e-25 126.0
45 TraesCS3B01G184100 chr6B 89.000 100 9 2 507 605 30096623 30096525 3.100000e-24 122.0
46 TraesCS3B01G184100 chr6B 89.000 100 9 2 507 605 30112419 30112321 3.100000e-24 122.0
47 TraesCS3B01G184100 chr2A 100.000 28 0 0 654 681 705822772 705822799 4.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G184100 chr3B 199225195 199227494 2299 True 4248 4248 100.000 1 2300 1 chr3B.!!$R2 2299
1 TraesCS3B01G184100 chr3D 136567596 136568785 1189 True 1672 1672 92.016 596 1797 1 chr3D.!!$R1 1201
2 TraesCS3B01G184100 chr3A 154383039 154384297 1258 True 1661 1661 90.683 751 2010 1 chr3A.!!$R3 1259
3 TraesCS3B01G184100 chr2D 48182224 48182744 520 True 305 305 77.715 70 593 1 chr2D.!!$R1 523

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
222 231 0.109086 ATGACACAAGAGCGTCGGAG 60.109 55.0 0.0 0.0 34.78 4.63 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2157 2195 0.035317 CTGCTCACACCCTAAGCACA 59.965 55.0 0.0 0.0 40.91 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 6.091123 GCTTAACGACGATGTTTATTGAGT 57.909 37.500 0.00 0.00 33.32 3.41
31 32 5.952064 GCTTAACGACGATGTTTATTGAGTG 59.048 40.000 0.00 0.00 33.32 3.51
32 33 4.921470 AACGACGATGTTTATTGAGTGG 57.079 40.909 0.00 0.00 0.00 4.00
33 34 3.259064 ACGACGATGTTTATTGAGTGGG 58.741 45.455 0.00 0.00 0.00 4.61
34 35 3.056393 ACGACGATGTTTATTGAGTGGGA 60.056 43.478 0.00 0.00 0.00 4.37
35 36 3.930229 CGACGATGTTTATTGAGTGGGAA 59.070 43.478 0.00 0.00 0.00 3.97
36 37 4.032900 CGACGATGTTTATTGAGTGGGAAG 59.967 45.833 0.00 0.00 0.00 3.46
37 38 5.160607 ACGATGTTTATTGAGTGGGAAGA 57.839 39.130 0.00 0.00 0.00 2.87
38 39 5.178797 ACGATGTTTATTGAGTGGGAAGAG 58.821 41.667 0.00 0.00 0.00 2.85
39 40 5.046591 ACGATGTTTATTGAGTGGGAAGAGA 60.047 40.000 0.00 0.00 0.00 3.10
40 41 6.051717 CGATGTTTATTGAGTGGGAAGAGAT 58.948 40.000 0.00 0.00 0.00 2.75
41 42 7.147724 ACGATGTTTATTGAGTGGGAAGAGATA 60.148 37.037 0.00 0.00 0.00 1.98
42 43 7.875041 CGATGTTTATTGAGTGGGAAGAGATAT 59.125 37.037 0.00 0.00 0.00 1.63
43 44 9.566432 GATGTTTATTGAGTGGGAAGAGATATT 57.434 33.333 0.00 0.00 0.00 1.28
44 45 8.737168 TGTTTATTGAGTGGGAAGAGATATTG 57.263 34.615 0.00 0.00 0.00 1.90
45 46 7.283127 TGTTTATTGAGTGGGAAGAGATATTGC 59.717 37.037 0.00 0.00 0.00 3.56
46 47 5.643421 ATTGAGTGGGAAGAGATATTGCT 57.357 39.130 0.00 0.00 0.00 3.91
47 48 5.441718 TTGAGTGGGAAGAGATATTGCTT 57.558 39.130 0.00 0.00 0.00 3.91
48 49 5.028549 TGAGTGGGAAGAGATATTGCTTC 57.971 43.478 9.02 9.02 39.74 3.86
49 50 4.054671 GAGTGGGAAGAGATATTGCTTCG 58.945 47.826 10.53 0.00 41.02 3.79
50 51 3.706594 AGTGGGAAGAGATATTGCTTCGA 59.293 43.478 10.53 0.00 41.02 3.71
51 52 3.804873 GTGGGAAGAGATATTGCTTCGAC 59.195 47.826 10.53 7.47 41.02 4.20
52 53 3.706594 TGGGAAGAGATATTGCTTCGACT 59.293 43.478 10.53 0.00 41.02 4.18
53 54 4.893524 TGGGAAGAGATATTGCTTCGACTA 59.106 41.667 10.53 0.00 41.02 2.59
54 55 5.540337 TGGGAAGAGATATTGCTTCGACTAT 59.460 40.000 10.53 0.00 41.02 2.12
55 56 5.866633 GGGAAGAGATATTGCTTCGACTATG 59.133 44.000 10.53 0.00 41.02 2.23
56 57 6.294787 GGGAAGAGATATTGCTTCGACTATGA 60.295 42.308 10.53 0.00 41.02 2.15
57 58 6.806249 GGAAGAGATATTGCTTCGACTATGAG 59.194 42.308 10.53 0.00 41.02 2.90
58 59 6.266168 AGAGATATTGCTTCGACTATGAGG 57.734 41.667 0.00 0.00 0.00 3.86
59 60 4.815269 AGATATTGCTTCGACTATGAGGC 58.185 43.478 0.00 0.00 41.00 4.70
60 61 2.246719 ATTGCTTCGACTATGAGGCC 57.753 50.000 0.00 0.00 39.98 5.19
61 62 1.195115 TTGCTTCGACTATGAGGCCT 58.805 50.000 3.86 3.86 39.98 5.19
62 63 1.195115 TGCTTCGACTATGAGGCCTT 58.805 50.000 6.77 0.00 39.98 4.35
63 64 1.555075 TGCTTCGACTATGAGGCCTTT 59.445 47.619 6.77 0.00 39.98 3.11
64 65 1.936547 GCTTCGACTATGAGGCCTTTG 59.063 52.381 6.77 0.00 35.13 2.77
65 66 2.678190 GCTTCGACTATGAGGCCTTTGT 60.678 50.000 6.77 3.37 35.13 2.83
66 67 2.672961 TCGACTATGAGGCCTTTGTG 57.327 50.000 6.77 0.39 0.00 3.33
67 68 1.207089 TCGACTATGAGGCCTTTGTGG 59.793 52.381 6.77 5.42 39.35 4.17
68 69 1.066143 CGACTATGAGGCCTTTGTGGT 60.066 52.381 6.77 3.98 38.35 4.16
82 83 4.758251 TGGTGGCGTCCGATGCAG 62.758 66.667 14.49 0.00 0.00 4.41
84 85 4.760047 GTGGCGTCCGATGCAGGT 62.760 66.667 14.49 0.00 0.00 4.00
86 87 2.185867 GGCGTCCGATGCAGGTTA 59.814 61.111 14.49 0.00 0.00 2.85
88 89 1.702491 GGCGTCCGATGCAGGTTAAC 61.702 60.000 14.49 0.00 0.00 2.01
90 91 0.457166 CGTCCGATGCAGGTTAACGA 60.457 55.000 0.00 0.00 32.78 3.85
94 95 2.492881 TCCGATGCAGGTTAACGAACTA 59.507 45.455 0.00 0.00 35.74 2.24
96 97 2.858344 CGATGCAGGTTAACGAACTAGG 59.142 50.000 0.00 0.00 35.74 3.02
97 98 3.675228 CGATGCAGGTTAACGAACTAGGT 60.675 47.826 0.00 0.00 35.74 3.08
99 100 2.629137 TGCAGGTTAACGAACTAGGTCA 59.371 45.455 8.85 0.00 35.74 4.02
106 107 2.830651 ACGAACTAGGTCAGGAGGAT 57.169 50.000 8.85 0.00 0.00 3.24
108 109 2.025226 ACGAACTAGGTCAGGAGGATGA 60.025 50.000 8.85 0.00 0.00 2.92
109 110 9.696417 GTTAACGAACTAGGTCAGGAGGATGAC 62.696 48.148 8.85 0.00 39.53 3.06
129 130 3.800685 TTGTCTGGCGTCGTGGTGG 62.801 63.158 0.00 0.00 0.00 4.61
154 159 2.439156 GGCAGGCCTGACATGGTC 60.439 66.667 37.21 16.19 38.82 4.02
157 162 1.524002 CAGGCCTGACATGGTCGAT 59.476 57.895 29.88 0.00 36.69 3.59
158 163 0.812811 CAGGCCTGACATGGTCGATG 60.813 60.000 29.88 0.00 36.69 3.84
160 165 2.528743 GCCTGACATGGTCGATGCG 61.529 63.158 0.00 0.00 35.15 4.73
166 171 1.665679 GACATGGTCGATGCGTCAATT 59.334 47.619 6.75 0.00 35.15 2.32
171 176 1.732259 GGTCGATGCGTCAATTTCTGT 59.268 47.619 6.75 0.00 0.00 3.41
173 178 3.369756 GGTCGATGCGTCAATTTCTGTTA 59.630 43.478 6.75 0.00 0.00 2.41
180 185 6.741992 TGCGTCAATTTCTGTTATGAAGAT 57.258 33.333 0.00 0.00 0.00 2.40
184 189 7.467811 GCGTCAATTTCTGTTATGAAGATGGAT 60.468 37.037 0.00 0.00 0.00 3.41
186 191 8.066595 GTCAATTTCTGTTATGAAGATGGATCG 58.933 37.037 0.00 0.00 0.00 3.69
190 195 4.649218 TCTGTTATGAAGATGGATCGGTGA 59.351 41.667 0.00 0.00 0.00 4.02
195 200 3.861840 TGAAGATGGATCGGTGAAAGAC 58.138 45.455 0.00 0.00 0.00 3.01
204 209 2.813908 GTGAAAGACGGCGGCGAT 60.814 61.111 38.93 22.64 0.00 4.58
213 222 2.434185 GGCGGCGATGACACAAGA 60.434 61.111 12.98 0.00 0.00 3.02
219 228 1.983907 CGATGACACAAGAGCGTCG 59.016 57.895 0.00 0.00 34.78 5.12
222 231 0.109086 ATGACACAAGAGCGTCGGAG 60.109 55.000 0.00 0.00 34.78 4.63
231 240 2.431260 GCGTCGGAGCGGTTTGTA 60.431 61.111 0.00 0.00 0.00 2.41
237 246 1.073548 GGAGCGGTTTGTACCCCAA 59.926 57.895 0.00 0.00 41.75 4.12
239 248 1.541379 GAGCGGTTTGTACCCCAAAT 58.459 50.000 0.00 0.00 44.50 2.32
242 251 1.912417 CGGTTTGTACCCCAAATCCA 58.088 50.000 0.00 0.00 44.50 3.41
251 260 8.405583 TTTGTACCCCAAATCCAGTATGTGGT 62.406 42.308 0.00 0.00 41.03 4.16
260 269 2.870175 CCAGTATGTGGTTTGGTTGGA 58.130 47.619 0.00 0.00 42.17 3.53
263 272 1.544246 GTATGTGGTTTGGTTGGAGCC 59.456 52.381 0.00 0.00 0.00 4.70
283 292 2.698797 CCTCCGGCTTTAGATGTTAGGA 59.301 50.000 0.00 0.00 0.00 2.94
286 295 5.367945 TCCGGCTTTAGATGTTAGGATTT 57.632 39.130 0.00 0.00 0.00 2.17
288 297 5.104693 TCCGGCTTTAGATGTTAGGATTTGA 60.105 40.000 0.00 0.00 0.00 2.69
291 300 6.442112 GGCTTTAGATGTTAGGATTTGATGC 58.558 40.000 0.00 0.00 0.00 3.91
293 302 6.017934 GCTTTAGATGTTAGGATTTGATGCGA 60.018 38.462 0.00 0.00 0.00 5.10
294 303 7.308229 GCTTTAGATGTTAGGATTTGATGCGAT 60.308 37.037 0.00 0.00 0.00 4.58
295 304 9.208022 CTTTAGATGTTAGGATTTGATGCGATA 57.792 33.333 0.00 0.00 0.00 2.92
297 306 7.840342 AGATGTTAGGATTTGATGCGATATC 57.160 36.000 0.00 0.00 0.00 1.63
300 309 6.524734 TGTTAGGATTTGATGCGATATCTGT 58.475 36.000 0.34 0.00 0.00 3.41
301 310 6.992123 TGTTAGGATTTGATGCGATATCTGTT 59.008 34.615 0.34 0.00 0.00 3.16
303 312 6.309712 AGGATTTGATGCGATATCTGTTTG 57.690 37.500 0.34 0.00 0.00 2.93
304 313 6.057533 AGGATTTGATGCGATATCTGTTTGA 58.942 36.000 0.34 0.00 0.00 2.69
306 315 7.879677 AGGATTTGATGCGATATCTGTTTGATA 59.120 33.333 0.34 0.00 41.38 2.15
311 320 8.707938 TGATGCGATATCTGTTTGATATTAGG 57.292 34.615 0.34 0.00 45.52 2.69
312 321 6.968131 TGCGATATCTGTTTGATATTAGGC 57.032 37.500 0.34 0.00 45.52 3.93
313 322 6.701340 TGCGATATCTGTTTGATATTAGGCT 58.299 36.000 0.34 0.00 45.52 4.58
315 324 7.118245 TGCGATATCTGTTTGATATTAGGCTTG 59.882 37.037 0.00 0.00 45.52 4.01
316 325 7.331934 GCGATATCTGTTTGATATTAGGCTTGA 59.668 37.037 0.00 0.00 45.52 3.02
317 326 9.208022 CGATATCTGTTTGATATTAGGCTTGAA 57.792 33.333 0.00 0.00 45.52 2.69
322 331 9.547753 TCTGTTTGATATTAGGCTTGAACTATC 57.452 33.333 0.00 0.00 0.00 2.08
323 332 8.365399 TGTTTGATATTAGGCTTGAACTATCG 57.635 34.615 0.00 0.00 0.00 2.92
324 333 7.441157 TGTTTGATATTAGGCTTGAACTATCGG 59.559 37.037 0.00 0.00 0.00 4.18
328 337 0.905357 AGGCTTGAACTATCGGCACT 59.095 50.000 0.00 0.00 0.00 4.40
338 347 2.766263 ACTATCGGCACTCCTTCATCAA 59.234 45.455 0.00 0.00 0.00 2.57
339 348 2.322355 ATCGGCACTCCTTCATCAAG 57.678 50.000 0.00 0.00 0.00 3.02
341 350 1.347707 TCGGCACTCCTTCATCAAGTT 59.652 47.619 0.00 0.00 0.00 2.66
346 355 4.574013 GGCACTCCTTCATCAAGTTGATAG 59.426 45.833 17.86 13.36 34.28 2.08
349 358 6.409704 CACTCCTTCATCAAGTTGATAGGAA 58.590 40.000 26.68 20.84 34.28 3.36
355 364 6.161855 TCATCAAGTTGATAGGAATAGCGT 57.838 37.500 17.86 0.00 34.28 5.07
358 367 5.592054 TCAAGTTGATAGGAATAGCGTCAG 58.408 41.667 0.08 0.00 0.00 3.51
359 368 5.127194 TCAAGTTGATAGGAATAGCGTCAGT 59.873 40.000 0.08 0.00 0.00 3.41
361 370 5.352284 AGTTGATAGGAATAGCGTCAGTTG 58.648 41.667 0.00 0.00 0.00 3.16
365 374 3.402628 AGGAATAGCGTCAGTTGTTGT 57.597 42.857 0.00 0.00 0.00 3.32
366 375 3.740115 AGGAATAGCGTCAGTTGTTGTT 58.260 40.909 0.00 0.00 0.00 2.83
371 380 6.092259 GGAATAGCGTCAGTTGTTGTTAAGAT 59.908 38.462 0.00 0.00 0.00 2.40
372 381 4.732285 AGCGTCAGTTGTTGTTAAGATG 57.268 40.909 0.00 0.00 0.00 2.90
374 383 3.250040 GCGTCAGTTGTTGTTAAGATGGT 59.750 43.478 0.00 0.00 0.00 3.55
375 384 4.772434 CGTCAGTTGTTGTTAAGATGGTG 58.228 43.478 0.00 0.00 0.00 4.17
376 385 4.319477 CGTCAGTTGTTGTTAAGATGGTGG 60.319 45.833 0.00 0.00 0.00 4.61
377 386 3.568007 TCAGTTGTTGTTAAGATGGTGGC 59.432 43.478 0.00 0.00 0.00 5.01
379 388 2.890945 GTTGTTGTTAAGATGGTGGCCT 59.109 45.455 3.32 0.00 0.00 5.19
380 389 2.790433 TGTTGTTAAGATGGTGGCCTC 58.210 47.619 3.32 0.00 0.00 4.70
382 391 2.749621 GTTGTTAAGATGGTGGCCTCAG 59.250 50.000 3.32 0.00 0.00 3.35
384 393 2.027192 TGTTAAGATGGTGGCCTCAGAC 60.027 50.000 3.32 0.00 0.00 3.51
385 394 2.237392 GTTAAGATGGTGGCCTCAGACT 59.763 50.000 3.32 4.08 0.00 3.24
386 395 2.254152 AAGATGGTGGCCTCAGACTA 57.746 50.000 3.32 0.00 0.00 2.59
387 396 1.490574 AGATGGTGGCCTCAGACTAC 58.509 55.000 3.32 0.00 0.00 2.73
388 397 0.466124 GATGGTGGCCTCAGACTACC 59.534 60.000 3.32 0.88 0.00 3.18
390 399 0.708209 TGGTGGCCTCAGACTACCTA 59.292 55.000 3.32 0.00 32.68 3.08
391 400 1.078159 TGGTGGCCTCAGACTACCTAA 59.922 52.381 3.32 0.00 32.68 2.69
396 405 3.958798 TGGCCTCAGACTACCTAATGTAC 59.041 47.826 3.32 0.00 0.00 2.90
406 415 6.620682 AGACTACCTAATGTACTACTCCCTCT 59.379 42.308 0.00 0.00 0.00 3.69
410 419 6.262207 ACCTAATGTACTACTCCCTCTGTTT 58.738 40.000 0.00 0.00 0.00 2.83
426 435 4.304110 TCTGTTTCAAATTACTCGTCGCT 58.696 39.130 0.00 0.00 0.00 4.93
443 452 6.270064 TCGTCGCTGAAATTGATGTATCTAA 58.730 36.000 0.00 0.00 0.00 2.10
489 498 4.506288 TCCATATGTGCGACAAGTAATTCG 59.494 41.667 1.24 0.00 38.31 3.34
511 520 3.450096 GGAACGGAGGGAGTACTTTGTAT 59.550 47.826 0.00 0.00 0.00 2.29
512 521 4.081254 GGAACGGAGGGAGTACTTTGTATT 60.081 45.833 0.00 0.00 0.00 1.89
516 525 4.159879 CGGAGGGAGTACTTTGTATTGTCT 59.840 45.833 0.00 0.00 0.00 3.41
518 527 6.473758 GGAGGGAGTACTTTGTATTGTCTTT 58.526 40.000 0.00 0.00 0.00 2.52
520 529 6.838382 AGGGAGTACTTTGTATTGTCTTTGT 58.162 36.000 0.00 0.00 0.00 2.83
551 560 7.621832 TTAATAAAATAGTTGCATGCATCGC 57.378 32.000 23.37 14.69 0.00 4.58
552 561 2.497107 AAATAGTTGCATGCATCGCC 57.503 45.000 23.37 9.98 0.00 5.54
565 574 1.910722 ATCGCCCAGATGCAGAAGT 59.089 52.632 0.00 0.00 38.36 3.01
567 576 2.169789 CGCCCAGATGCAGAAGTCG 61.170 63.158 0.00 0.00 0.00 4.18
573 582 0.325296 AGATGCAGAAGTCGGGGGTA 60.325 55.000 0.00 0.00 0.00 3.69
617 627 0.951040 GAGGCCTTGTGGTGACTTCG 60.951 60.000 6.77 0.00 35.27 3.79
634 644 4.380531 ACTTCGTCAATCTCAACATGTGT 58.619 39.130 0.00 0.00 0.00 3.72
646 656 2.057137 ACATGTGTTGTTGGCTCAGT 57.943 45.000 0.00 0.00 33.74 3.41
648 658 3.754965 ACATGTGTTGTTGGCTCAGTAT 58.245 40.909 0.00 0.00 33.74 2.12
672 682 3.237268 AGAGGTGCTCATAGGACTAGG 57.763 52.381 0.00 0.00 36.73 3.02
676 686 2.389715 GTGCTCATAGGACTAGGGTGT 58.610 52.381 0.00 0.00 33.44 4.16
685 695 1.108776 GACTAGGGTGTGCGTGGATA 58.891 55.000 0.00 0.00 0.00 2.59
686 696 1.479323 GACTAGGGTGTGCGTGGATAA 59.521 52.381 0.00 0.00 0.00 1.75
687 697 1.480954 ACTAGGGTGTGCGTGGATAAG 59.519 52.381 0.00 0.00 0.00 1.73
693 703 3.181473 GGGTGTGCGTGGATAAGTGTATA 60.181 47.826 0.00 0.00 0.00 1.47
697 707 3.121279 GTGCGTGGATAAGTGTATATGCG 59.879 47.826 0.00 0.00 0.00 4.73
720 730 2.515523 GTGGGCATCTGCGATGCT 60.516 61.111 29.22 0.00 44.02 3.79
742 752 8.700722 TGCTTAATTTTATACATTGCCAACTG 57.299 30.769 0.00 0.00 0.00 3.16
783 793 1.130938 TGTGTGCAAGCATCATTAGCG 59.869 47.619 0.00 0.00 37.01 4.26
823 835 1.355971 GATTGCTCGTCCGCTAAACA 58.644 50.000 0.00 0.00 0.00 2.83
840 852 5.287992 GCTAAACACTCGAGCTTTTACGTAT 59.712 40.000 13.61 0.00 33.28 3.06
895 907 1.931906 CACCTCACCTCACATGATCG 58.068 55.000 0.00 0.00 0.00 3.69
899 911 0.176449 TCACCTCACATGATCGCCAG 59.824 55.000 0.00 0.00 0.00 4.85
925 937 3.353557 CACCAGAGTAGTAGTACCAGCA 58.646 50.000 4.02 0.00 0.00 4.41
927 939 3.010361 ACCAGAGTAGTAGTACCAGCAGT 59.990 47.826 4.02 0.00 0.00 4.40
960 972 1.303888 TACGAGTCCCACCGAGCTT 60.304 57.895 0.00 0.00 0.00 3.74
1045 1064 4.036380 GCACTTGCATTCTGATCATCATCA 59.964 41.667 0.00 0.00 41.59 3.07
1138 1157 1.750399 CCATGGGGCGAGTTGGAAG 60.750 63.158 2.85 0.00 0.00 3.46
1224 1243 2.434185 GAAGCCATGTCGACCGCA 60.434 61.111 14.12 0.00 0.00 5.69
1399 1418 9.768662 AGCATTCTATGTTCTTGAATTTTGTTT 57.231 25.926 0.00 0.00 28.48 2.83
1459 1478 3.748048 CCAAGTGTGTACTCATGTTCTGG 59.252 47.826 0.24 1.22 35.69 3.86
1460 1479 3.685139 AGTGTGTACTCATGTTCTGGG 57.315 47.619 0.24 0.00 28.79 4.45
1558 1581 7.661040 TCCTTTTCATTTCTCCTTGAATGTTC 58.339 34.615 0.00 0.00 34.24 3.18
1559 1582 6.583806 CCTTTTCATTTCTCCTTGAATGTTCG 59.416 38.462 0.00 0.00 34.24 3.95
1560 1583 6.633500 TTTCATTTCTCCTTGAATGTTCGT 57.367 33.333 0.00 0.00 34.24 3.85
1561 1584 7.737972 TTTCATTTCTCCTTGAATGTTCGTA 57.262 32.000 0.00 0.00 34.24 3.43
1565 1588 8.073768 TCATTTCTCCTTGAATGTTCGTAAAAC 58.926 33.333 0.00 0.00 34.24 2.43
1589 1612 7.207383 ACAAACTATTTTAAGCAACCCACTTC 58.793 34.615 0.00 0.00 0.00 3.01
1603 1626 5.304686 ACCCACTTCAACTCAGTTTATGA 57.695 39.130 0.00 0.00 36.21 2.15
1638 1661 6.072728 TGTGCGCTTATTTCTTAAGTCATTGT 60.073 34.615 9.73 0.00 39.67 2.71
1710 1733 3.805207 ACGAAAGAAGTGCATATACCCC 58.195 45.455 0.00 0.00 0.00 4.95
1747 1771 2.771943 TGGCTACATCACCCCTTAGAAG 59.228 50.000 0.00 0.00 0.00 2.85
1757 1781 1.339727 CCCCTTAGAAGTCCAAACCCG 60.340 57.143 0.00 0.00 0.00 5.28
1806 1838 3.695803 ACATCACCCATGTGGCATT 57.304 47.368 0.00 0.00 44.70 3.56
1842 1880 5.366482 AAAAGTTAAAATGGCCACCTTGT 57.634 34.783 8.16 0.00 0.00 3.16
1845 1883 4.993028 AGTTAAAATGGCCACCTTGTAGA 58.007 39.130 8.16 0.00 0.00 2.59
1846 1884 5.580022 AGTTAAAATGGCCACCTTGTAGAT 58.420 37.500 8.16 0.00 0.00 1.98
1853 1891 0.394352 CCACCTTGTAGATGGGTGCC 60.394 60.000 5.90 0.00 38.36 5.01
1854 1892 0.620556 CACCTTGTAGATGGGTGCCT 59.379 55.000 0.00 0.00 38.36 4.75
1855 1893 1.837439 CACCTTGTAGATGGGTGCCTA 59.163 52.381 0.00 0.00 38.36 3.93
1856 1894 2.119495 ACCTTGTAGATGGGTGCCTAG 58.881 52.381 0.00 0.00 31.48 3.02
1858 1896 2.975489 CCTTGTAGATGGGTGCCTAGAT 59.025 50.000 0.00 0.00 0.00 1.98
1859 1897 4.160329 CCTTGTAGATGGGTGCCTAGATA 58.840 47.826 0.00 0.00 0.00 1.98
1861 1899 4.193240 TGTAGATGGGTGCCTAGATACA 57.807 45.455 0.00 0.00 0.00 2.29
1862 1900 3.895656 TGTAGATGGGTGCCTAGATACAC 59.104 47.826 0.00 0.00 36.03 2.90
1863 1901 1.964223 AGATGGGTGCCTAGATACACG 59.036 52.381 0.00 0.00 37.68 4.49
1864 1902 0.393077 ATGGGTGCCTAGATACACGC 59.607 55.000 15.76 15.76 46.55 5.34
1865 1903 1.820581 GGGTGCCTAGATACACGCA 59.179 57.895 16.96 4.37 45.90 5.24
1866 1904 0.177141 GGGTGCCTAGATACACGCAA 59.823 55.000 16.96 0.00 45.90 4.85
1867 1905 1.806623 GGGTGCCTAGATACACGCAAG 60.807 57.143 16.96 0.00 45.90 4.01
1956 1994 2.862674 ATCCGCAACGCCGTTACCAT 62.863 55.000 0.45 0.00 0.00 3.55
1978 2016 0.611062 TCGACATTGTCCTCTCCGGT 60.611 55.000 11.12 0.00 0.00 5.28
1993 2031 1.736645 CGGTTGCGATGACTTCCGT 60.737 57.895 0.00 0.00 34.38 4.69
1997 2035 0.787787 TTGCGATGACTTCCGTTTCG 59.212 50.000 0.00 0.00 34.31 3.46
2001 2039 1.005394 ATGACTTCCGTTTCGCCGT 60.005 52.632 0.00 0.00 0.00 5.68
2004 2042 1.668253 GACTTCCGTTTCGCCGTACG 61.668 60.000 8.69 8.69 45.62 3.67
2010 2048 1.705727 GTTTCGCCGTACGTCATGG 59.294 57.895 15.21 0.00 44.19 3.66
2011 2049 1.446445 TTTCGCCGTACGTCATGGG 60.446 57.895 15.21 7.22 44.19 4.00
2012 2050 3.993376 TTCGCCGTACGTCATGGGC 62.993 63.158 15.21 8.16 44.19 5.36
2014 2052 4.807039 GCCGTACGTCATGGGCGT 62.807 66.667 15.21 17.38 45.11 5.68
2015 2053 2.883730 CCGTACGTCATGGGCGTG 60.884 66.667 20.71 9.23 42.87 5.34
2016 2054 2.126228 CGTACGTCATGGGCGTGT 60.126 61.111 20.71 4.54 42.87 4.49
2017 2055 1.735198 CGTACGTCATGGGCGTGTT 60.735 57.895 20.71 3.07 42.87 3.32
2018 2056 1.286354 CGTACGTCATGGGCGTGTTT 61.286 55.000 20.71 2.79 42.87 2.83
2019 2057 0.165079 GTACGTCATGGGCGTGTTTG 59.835 55.000 20.71 0.00 42.87 2.93
2020 2058 0.951525 TACGTCATGGGCGTGTTTGG 60.952 55.000 20.71 0.00 42.87 3.28
2021 2059 2.258013 CGTCATGGGCGTGTTTGGT 61.258 57.895 0.00 0.00 0.00 3.67
2022 2060 1.791103 CGTCATGGGCGTGTTTGGTT 61.791 55.000 0.00 0.00 0.00 3.67
2023 2061 0.039527 GTCATGGGCGTGTTTGGTTC 60.040 55.000 0.00 0.00 0.00 3.62
2024 2062 1.175983 TCATGGGCGTGTTTGGTTCC 61.176 55.000 0.00 0.00 0.00 3.62
2025 2063 1.152652 ATGGGCGTGTTTGGTTCCA 60.153 52.632 0.00 0.00 0.00 3.53
2026 2064 1.178534 ATGGGCGTGTTTGGTTCCAG 61.179 55.000 0.00 0.00 0.00 3.86
2027 2065 1.826487 GGGCGTGTTTGGTTCCAGT 60.826 57.895 0.00 0.00 0.00 4.00
2028 2066 1.388837 GGGCGTGTTTGGTTCCAGTT 61.389 55.000 0.00 0.00 0.00 3.16
2029 2067 0.458260 GGCGTGTTTGGTTCCAGTTT 59.542 50.000 0.00 0.00 0.00 2.66
2030 2068 1.555477 GCGTGTTTGGTTCCAGTTTG 58.445 50.000 0.00 0.00 0.00 2.93
2031 2069 1.555477 CGTGTTTGGTTCCAGTTTGC 58.445 50.000 0.00 0.00 0.00 3.68
2032 2070 1.135257 CGTGTTTGGTTCCAGTTTGCA 60.135 47.619 0.00 0.00 0.00 4.08
2033 2071 2.672478 CGTGTTTGGTTCCAGTTTGCAA 60.672 45.455 0.00 0.00 0.00 4.08
2034 2072 2.670905 GTGTTTGGTTCCAGTTTGCAAC 59.329 45.455 0.00 0.00 0.00 4.17
2035 2073 2.300152 TGTTTGGTTCCAGTTTGCAACA 59.700 40.909 0.00 1.83 0.00 3.33
2036 2074 2.929398 GTTTGGTTCCAGTTTGCAACAG 59.071 45.455 0.00 0.00 0.00 3.16
2037 2075 1.846007 TGGTTCCAGTTTGCAACAGT 58.154 45.000 0.00 0.00 0.00 3.55
2038 2076 2.175202 TGGTTCCAGTTTGCAACAGTT 58.825 42.857 0.00 0.00 0.00 3.16
2039 2077 2.165437 TGGTTCCAGTTTGCAACAGTTC 59.835 45.455 0.00 0.00 0.00 3.01
2040 2078 2.481276 GGTTCCAGTTTGCAACAGTTCC 60.481 50.000 0.00 0.00 0.00 3.62
2041 2079 2.427095 GTTCCAGTTTGCAACAGTTCCT 59.573 45.455 0.00 0.00 0.00 3.36
2042 2080 2.023673 TCCAGTTTGCAACAGTTCCTG 58.976 47.619 0.00 0.00 37.52 3.86
2043 2081 1.536709 CCAGTTTGCAACAGTTCCTGC 60.537 52.381 0.00 0.00 39.09 4.85
2044 2082 1.134753 CAGTTTGCAACAGTTCCTGCA 59.865 47.619 0.00 0.00 46.50 4.41
2047 2085 3.731716 TGCAACAGTTCCTGCATCT 57.268 47.368 0.00 0.00 43.44 2.90
2048 2086 1.527034 TGCAACAGTTCCTGCATCTC 58.473 50.000 0.00 0.00 43.44 2.75
2049 2087 1.202794 TGCAACAGTTCCTGCATCTCA 60.203 47.619 0.00 0.00 43.44 3.27
2050 2088 1.881973 GCAACAGTTCCTGCATCTCAA 59.118 47.619 0.00 0.00 38.48 3.02
2051 2089 2.351157 GCAACAGTTCCTGCATCTCAAC 60.351 50.000 0.00 0.00 38.48 3.18
2052 2090 2.880268 CAACAGTTCCTGCATCTCAACA 59.120 45.455 0.00 0.00 34.37 3.33
2053 2091 2.775890 ACAGTTCCTGCATCTCAACAG 58.224 47.619 0.00 0.00 34.37 3.16
2054 2092 1.467734 CAGTTCCTGCATCTCAACAGC 59.532 52.381 0.00 0.00 32.37 4.40
2055 2093 0.807496 GTTCCTGCATCTCAACAGCC 59.193 55.000 0.00 0.00 32.37 4.85
2056 2094 0.694771 TTCCTGCATCTCAACAGCCT 59.305 50.000 0.00 0.00 32.37 4.58
2057 2095 0.035725 TCCTGCATCTCAACAGCCTG 60.036 55.000 0.00 0.00 32.37 4.85
2058 2096 1.030488 CCTGCATCTCAACAGCCTGG 61.030 60.000 0.00 0.00 32.37 4.45
2059 2097 0.322277 CTGCATCTCAACAGCCTGGT 60.322 55.000 0.00 0.00 0.00 4.00
2060 2098 0.111061 TGCATCTCAACAGCCTGGTT 59.889 50.000 0.00 0.00 0.00 3.67
2061 2099 1.251251 GCATCTCAACAGCCTGGTTT 58.749 50.000 0.00 0.00 0.00 3.27
2062 2100 1.615392 GCATCTCAACAGCCTGGTTTT 59.385 47.619 0.00 0.00 0.00 2.43
2063 2101 2.036346 GCATCTCAACAGCCTGGTTTTT 59.964 45.455 0.00 0.00 0.00 1.94
2064 2102 3.645884 CATCTCAACAGCCTGGTTTTTG 58.354 45.455 3.33 3.33 0.00 2.44
2065 2103 3.011566 TCTCAACAGCCTGGTTTTTGA 57.988 42.857 10.97 10.97 0.00 2.69
2066 2104 3.360867 TCTCAACAGCCTGGTTTTTGAA 58.639 40.909 12.25 3.06 0.00 2.69
2067 2105 3.766591 TCTCAACAGCCTGGTTTTTGAAA 59.233 39.130 12.25 0.00 0.00 2.69
2068 2106 4.405358 TCTCAACAGCCTGGTTTTTGAAAT 59.595 37.500 12.25 0.00 0.00 2.17
2069 2107 4.440880 TCAACAGCCTGGTTTTTGAAATG 58.559 39.130 9.32 1.29 0.00 2.32
2070 2108 2.837498 ACAGCCTGGTTTTTGAAATGC 58.163 42.857 0.00 0.00 0.00 3.56
2071 2109 2.170187 ACAGCCTGGTTTTTGAAATGCA 59.830 40.909 0.00 0.00 0.00 3.96
2072 2110 2.803956 CAGCCTGGTTTTTGAAATGCAG 59.196 45.455 0.00 0.00 0.00 4.41
2073 2111 1.532437 GCCTGGTTTTTGAAATGCAGC 59.468 47.619 0.00 0.00 0.00 5.25
2074 2112 2.145536 CCTGGTTTTTGAAATGCAGCC 58.854 47.619 0.00 0.00 0.00 4.85
2075 2113 2.224354 CCTGGTTTTTGAAATGCAGCCT 60.224 45.455 0.00 0.00 0.00 4.58
2076 2114 3.062042 CTGGTTTTTGAAATGCAGCCTC 58.938 45.455 0.00 0.00 0.00 4.70
2077 2115 2.433604 TGGTTTTTGAAATGCAGCCTCA 59.566 40.909 0.00 0.00 0.00 3.86
2078 2116 3.071312 TGGTTTTTGAAATGCAGCCTCAT 59.929 39.130 0.00 0.00 0.00 2.90
2079 2117 4.282957 TGGTTTTTGAAATGCAGCCTCATA 59.717 37.500 0.00 0.00 0.00 2.15
2080 2118 5.046448 TGGTTTTTGAAATGCAGCCTCATAT 60.046 36.000 0.00 0.00 0.00 1.78
2081 2119 5.292589 GGTTTTTGAAATGCAGCCTCATATG 59.707 40.000 0.00 0.00 0.00 1.78
2082 2120 3.720949 TTGAAATGCAGCCTCATATGC 57.279 42.857 0.00 0.00 42.86 3.14
2085 2123 4.152644 TGCAGCCTCATATGCAGC 57.847 55.556 8.32 8.32 46.97 5.25
2086 2124 1.225148 TGCAGCCTCATATGCAGCA 59.775 52.632 16.18 0.00 46.97 4.41
2087 2125 0.818040 TGCAGCCTCATATGCAGCAG 60.818 55.000 16.18 10.78 46.97 4.24
2088 2126 0.534427 GCAGCCTCATATGCAGCAGA 60.534 55.000 16.18 0.00 42.11 4.26
2089 2127 1.882780 GCAGCCTCATATGCAGCAGAT 60.883 52.381 16.18 0.00 42.11 2.90
2090 2128 1.807142 CAGCCTCATATGCAGCAGATG 59.193 52.381 21.92 21.92 34.79 2.90
2101 2139 2.060326 CAGCAGATGCAACCTGTTTG 57.940 50.000 17.30 13.15 45.16 2.93
2102 2140 0.963962 AGCAGATGCAACCTGTTTGG 59.036 50.000 17.30 0.00 45.16 3.28
2103 2141 1.755265 AGCAGATGCAACCTGTTTGGT 60.755 47.619 17.30 1.10 45.13 3.67
2111 2149 3.536164 CCTGTTTGGTTGCCTGCA 58.464 55.556 0.00 0.00 0.00 4.41
2112 2150 2.051941 CCTGTTTGGTTGCCTGCAT 58.948 52.632 0.00 0.00 0.00 3.96
2113 2151 0.037975 CCTGTTTGGTTGCCTGCATC 60.038 55.000 0.00 0.00 0.00 3.91
2114 2152 0.387622 CTGTTTGGTTGCCTGCATCG 60.388 55.000 0.00 0.00 0.00 3.84
2115 2153 1.734117 GTTTGGTTGCCTGCATCGC 60.734 57.895 0.00 0.00 0.00 4.58
2116 2154 2.198969 TTTGGTTGCCTGCATCGCA 61.199 52.632 4.57 4.57 36.92 5.10
2117 2155 1.534336 TTTGGTTGCCTGCATCGCAT 61.534 50.000 9.21 0.00 38.13 4.73
2118 2156 0.679321 TTGGTTGCCTGCATCGCATA 60.679 50.000 9.21 0.00 38.13 3.14
2119 2157 1.096967 TGGTTGCCTGCATCGCATAG 61.097 55.000 9.21 0.00 38.13 2.23
2120 2158 0.815213 GGTTGCCTGCATCGCATAGA 60.815 55.000 9.21 0.00 38.13 1.98
2121 2159 0.585357 GTTGCCTGCATCGCATAGAG 59.415 55.000 9.21 0.00 38.13 2.43
2122 2160 0.533531 TTGCCTGCATCGCATAGAGG 60.534 55.000 9.21 0.00 38.13 3.69
2123 2161 1.670406 GCCTGCATCGCATAGAGGG 60.670 63.158 1.21 0.00 38.13 4.30
2124 2162 1.004080 CCTGCATCGCATAGAGGGG 60.004 63.158 0.00 0.00 38.13 4.79
2125 2163 1.670406 CTGCATCGCATAGAGGGGC 60.670 63.158 0.00 0.00 38.13 5.80
2126 2164 2.387476 CTGCATCGCATAGAGGGGCA 62.387 60.000 0.00 0.00 38.13 5.36
2127 2165 1.963338 GCATCGCATAGAGGGGCAC 60.963 63.158 0.00 0.00 0.00 5.01
2128 2166 1.750930 CATCGCATAGAGGGGCACT 59.249 57.895 0.00 0.00 0.00 4.40
2129 2167 0.107456 CATCGCATAGAGGGGCACTT 59.893 55.000 0.00 0.00 0.00 3.16
2130 2168 1.344438 CATCGCATAGAGGGGCACTTA 59.656 52.381 0.00 0.00 0.00 2.24
2131 2169 0.750850 TCGCATAGAGGGGCACTTAC 59.249 55.000 0.00 0.00 0.00 2.34
2132 2170 0.249911 CGCATAGAGGGGCACTTACC 60.250 60.000 0.00 0.00 0.00 2.85
2150 2188 1.445518 CCCCCTGTTGTTTGGTTGC 59.554 57.895 0.00 0.00 0.00 4.17
2151 2189 1.445518 CCCCTGTTGTTTGGTTGCC 59.554 57.895 0.00 0.00 0.00 4.52
2152 2190 1.333636 CCCCTGTTGTTTGGTTGCCA 61.334 55.000 0.00 0.00 0.00 4.92
2153 2191 0.758123 CCCTGTTGTTTGGTTGCCAT 59.242 50.000 0.00 0.00 31.53 4.40
2154 2192 1.140652 CCCTGTTGTTTGGTTGCCATT 59.859 47.619 0.00 0.00 31.53 3.16
2155 2193 2.421248 CCCTGTTGTTTGGTTGCCATTT 60.421 45.455 0.00 0.00 31.53 2.32
2156 2194 3.277715 CCTGTTGTTTGGTTGCCATTTT 58.722 40.909 0.00 0.00 31.53 1.82
2157 2195 3.693578 CCTGTTGTTTGGTTGCCATTTTT 59.306 39.130 0.00 0.00 31.53 1.94
2158 2196 4.438472 CCTGTTGTTTGGTTGCCATTTTTG 60.438 41.667 0.00 0.00 31.53 2.44
2159 2197 4.074970 TGTTGTTTGGTTGCCATTTTTGT 58.925 34.783 0.00 0.00 31.53 2.83
2160 2198 4.083110 TGTTGTTTGGTTGCCATTTTTGTG 60.083 37.500 0.00 0.00 31.53 3.33
2161 2199 2.421424 TGTTTGGTTGCCATTTTTGTGC 59.579 40.909 0.00 0.00 31.53 4.57
2162 2200 2.682352 GTTTGGTTGCCATTTTTGTGCT 59.318 40.909 0.00 0.00 31.53 4.40
2163 2201 2.706339 TGGTTGCCATTTTTGTGCTT 57.294 40.000 0.00 0.00 0.00 3.91
2164 2202 3.827008 TGGTTGCCATTTTTGTGCTTA 57.173 38.095 0.00 0.00 0.00 3.09
2165 2203 3.726607 TGGTTGCCATTTTTGTGCTTAG 58.273 40.909 0.00 0.00 0.00 2.18
2166 2204 3.066380 GGTTGCCATTTTTGTGCTTAGG 58.934 45.455 0.00 0.00 0.00 2.69
2167 2205 3.066380 GTTGCCATTTTTGTGCTTAGGG 58.934 45.455 0.00 0.00 0.00 3.53
2168 2206 2.324541 TGCCATTTTTGTGCTTAGGGT 58.675 42.857 0.00 0.00 0.00 4.34
2169 2207 2.036992 TGCCATTTTTGTGCTTAGGGTG 59.963 45.455 0.00 0.00 0.00 4.61
2170 2208 2.037121 GCCATTTTTGTGCTTAGGGTGT 59.963 45.455 0.00 0.00 0.00 4.16
2171 2209 3.652274 CCATTTTTGTGCTTAGGGTGTG 58.348 45.455 0.00 0.00 0.00 3.82
2172 2210 3.320541 CCATTTTTGTGCTTAGGGTGTGA 59.679 43.478 0.00 0.00 0.00 3.58
2173 2211 4.549458 CATTTTTGTGCTTAGGGTGTGAG 58.451 43.478 0.00 0.00 0.00 3.51
2174 2212 1.604604 TTTGTGCTTAGGGTGTGAGC 58.395 50.000 0.00 0.00 36.95 4.26
2175 2213 0.472044 TTGTGCTTAGGGTGTGAGCA 59.528 50.000 0.00 0.00 43.56 4.26
2176 2214 0.035317 TGTGCTTAGGGTGTGAGCAG 59.965 55.000 0.00 0.00 46.06 4.24
2177 2215 0.321671 GTGCTTAGGGTGTGAGCAGA 59.678 55.000 0.00 0.00 46.06 4.26
2178 2216 1.065854 GTGCTTAGGGTGTGAGCAGAT 60.066 52.381 0.00 0.00 46.06 2.90
2179 2217 1.065926 TGCTTAGGGTGTGAGCAGATG 60.066 52.381 0.00 0.00 41.15 2.90
2180 2218 1.661341 CTTAGGGTGTGAGCAGATGC 58.339 55.000 0.00 0.00 42.49 3.91
2181 2219 0.983467 TTAGGGTGTGAGCAGATGCA 59.017 50.000 7.68 0.00 45.16 3.96
2182 2220 0.983467 TAGGGTGTGAGCAGATGCAA 59.017 50.000 7.68 0.00 45.16 4.08
2183 2221 0.111061 AGGGTGTGAGCAGATGCAAA 59.889 50.000 7.68 0.00 45.16 3.68
2184 2222 0.242017 GGGTGTGAGCAGATGCAAAC 59.758 55.000 7.68 5.37 45.16 2.93
2185 2223 1.242076 GGTGTGAGCAGATGCAAACT 58.758 50.000 7.68 0.00 45.16 2.66
2186 2224 1.610522 GGTGTGAGCAGATGCAAACTT 59.389 47.619 7.68 0.00 45.16 2.66
2187 2225 2.351157 GGTGTGAGCAGATGCAAACTTC 60.351 50.000 7.68 0.00 45.16 3.01
2188 2226 2.291465 GTGTGAGCAGATGCAAACTTCA 59.709 45.455 7.68 0.00 45.16 3.02
2189 2227 2.551032 TGTGAGCAGATGCAAACTTCAG 59.449 45.455 7.68 0.00 45.16 3.02
2190 2228 1.538512 TGAGCAGATGCAAACTTCAGC 59.461 47.619 7.68 0.00 45.16 4.26
2191 2229 1.811359 GAGCAGATGCAAACTTCAGCT 59.189 47.619 7.68 4.79 42.88 4.24
2193 2231 1.268899 GCAGATGCAAACTTCAGCTGT 59.731 47.619 14.67 0.00 46.32 4.40
2194 2232 2.288030 GCAGATGCAAACTTCAGCTGTT 60.288 45.455 14.67 0.00 46.32 3.16
2195 2233 3.797865 GCAGATGCAAACTTCAGCTGTTT 60.798 43.478 14.67 4.16 46.32 2.83
2201 2239 2.584492 AACTTCAGCTGTTTGGTTGC 57.416 45.000 14.67 0.00 0.00 4.17
2202 2240 1.473258 ACTTCAGCTGTTTGGTTGCA 58.527 45.000 14.67 0.00 0.00 4.08
2203 2241 1.824230 ACTTCAGCTGTTTGGTTGCAA 59.176 42.857 14.67 0.00 0.00 4.08
2204 2242 2.233431 ACTTCAGCTGTTTGGTTGCAAA 59.767 40.909 14.67 0.00 0.00 3.68
2205 2243 6.815003 AAACTTCAGCTGTTTGGTTGCAAAC 61.815 40.000 14.67 7.78 43.29 2.93
2221 2259 6.556146 TTGCAAACAACGTTTGTGTTATAC 57.444 33.333 18.02 3.69 44.59 1.47
2222 2260 5.881447 TGCAAACAACGTTTGTGTTATACT 58.119 33.333 18.02 0.00 44.59 2.12
2223 2261 5.966503 TGCAAACAACGTTTGTGTTATACTC 59.033 36.000 18.02 2.52 44.59 2.59
2224 2262 5.966503 GCAAACAACGTTTGTGTTATACTCA 59.033 36.000 18.02 0.00 44.59 3.41
2225 2263 6.075780 GCAAACAACGTTTGTGTTATACTCAC 60.076 38.462 18.02 1.59 44.59 3.51
2226 2264 5.662211 ACAACGTTTGTGTTATACTCACC 57.338 39.130 0.00 0.00 43.48 4.02
2227 2265 4.512571 ACAACGTTTGTGTTATACTCACCC 59.487 41.667 0.00 0.00 43.48 4.61
2228 2266 3.667360 ACGTTTGTGTTATACTCACCCC 58.333 45.455 5.23 0.00 35.25 4.95
2229 2267 3.071312 ACGTTTGTGTTATACTCACCCCA 59.929 43.478 5.23 0.00 35.25 4.96
2230 2268 4.258543 CGTTTGTGTTATACTCACCCCAT 58.741 43.478 5.23 0.00 35.25 4.00
2231 2269 4.698304 CGTTTGTGTTATACTCACCCCATT 59.302 41.667 5.23 0.00 35.25 3.16
2232 2270 5.163794 CGTTTGTGTTATACTCACCCCATTC 60.164 44.000 5.23 0.00 35.25 2.67
2233 2271 5.506730 TTGTGTTATACTCACCCCATTCA 57.493 39.130 5.23 0.00 35.25 2.57
2234 2272 5.506730 TGTGTTATACTCACCCCATTCAA 57.493 39.130 5.23 0.00 35.25 2.69
2235 2273 5.882040 TGTGTTATACTCACCCCATTCAAA 58.118 37.500 5.23 0.00 35.25 2.69
2236 2274 6.489603 TGTGTTATACTCACCCCATTCAAAT 58.510 36.000 5.23 0.00 35.25 2.32
2237 2275 6.376864 TGTGTTATACTCACCCCATTCAAATG 59.623 38.462 0.00 0.00 35.25 2.32
2238 2276 6.377146 GTGTTATACTCACCCCATTCAAATGT 59.623 38.462 2.31 0.00 34.60 2.71
2239 2277 6.376864 TGTTATACTCACCCCATTCAAATGTG 59.623 38.462 2.31 0.00 34.60 3.21
2240 2278 2.528564 ACTCACCCCATTCAAATGTGG 58.471 47.619 3.07 3.07 39.49 4.17
2241 2279 2.158325 ACTCACCCCATTCAAATGTGGT 60.158 45.455 4.29 4.29 46.15 4.16
2243 2281 1.643310 ACCCCATTCAAATGTGGTGG 58.357 50.000 8.80 3.57 44.02 4.61
2244 2282 0.249955 CCCCATTCAAATGTGGTGGC 59.750 55.000 2.31 0.00 34.60 5.01
2245 2283 0.249955 CCCATTCAAATGTGGTGGCC 59.750 55.000 0.00 0.00 34.60 5.36
2246 2284 1.269012 CCATTCAAATGTGGTGGCCT 58.731 50.000 3.32 0.00 34.60 5.19
2247 2285 1.624813 CCATTCAAATGTGGTGGCCTT 59.375 47.619 3.32 0.00 34.60 4.35
2248 2286 2.830923 CCATTCAAATGTGGTGGCCTTA 59.169 45.455 3.32 0.00 34.60 2.69
2249 2287 3.368323 CCATTCAAATGTGGTGGCCTTAC 60.368 47.826 3.32 0.44 34.60 2.34
2250 2288 1.917872 TCAAATGTGGTGGCCTTACC 58.082 50.000 3.32 4.45 41.24 2.85
2259 2297 2.469162 TGGCCTTACCACCACATGA 58.531 52.632 3.32 0.00 46.36 3.07
2260 2298 0.998928 TGGCCTTACCACCACATGAT 59.001 50.000 3.32 0.00 46.36 2.45
2261 2299 1.064758 TGGCCTTACCACCACATGATC 60.065 52.381 3.32 0.00 46.36 2.92
2262 2300 1.064758 GGCCTTACCACCACATGATCA 60.065 52.381 0.00 0.00 38.86 2.92
2263 2301 2.292267 GCCTTACCACCACATGATCAG 58.708 52.381 0.00 0.00 0.00 2.90
2264 2302 2.292267 CCTTACCACCACATGATCAGC 58.708 52.381 0.00 0.00 0.00 4.26
2265 2303 2.356022 CCTTACCACCACATGATCAGCA 60.356 50.000 0.00 0.00 0.00 4.41
2266 2304 2.401583 TACCACCACATGATCAGCAC 57.598 50.000 0.00 0.00 0.00 4.40
2267 2305 0.401356 ACCACCACATGATCAGCACA 59.599 50.000 0.00 0.00 0.00 4.57
2268 2306 1.202915 ACCACCACATGATCAGCACAA 60.203 47.619 0.00 0.00 0.00 3.33
2269 2307 1.200716 CCACCACATGATCAGCACAAC 59.799 52.381 0.00 0.00 0.00 3.32
2270 2308 1.881324 CACCACATGATCAGCACAACA 59.119 47.619 0.00 0.00 0.00 3.33
2271 2309 2.293955 CACCACATGATCAGCACAACAA 59.706 45.455 0.00 0.00 0.00 2.83
2272 2310 2.294233 ACCACATGATCAGCACAACAAC 59.706 45.455 0.00 0.00 0.00 3.32
2273 2311 2.293955 CCACATGATCAGCACAACAACA 59.706 45.455 0.00 0.00 0.00 3.33
2274 2312 3.302555 CACATGATCAGCACAACAACAC 58.697 45.455 0.00 0.00 0.00 3.32
2275 2313 2.950975 ACATGATCAGCACAACAACACA 59.049 40.909 0.00 0.00 0.00 3.72
2276 2314 3.380954 ACATGATCAGCACAACAACACAA 59.619 39.130 0.00 0.00 0.00 3.33
2277 2315 4.142204 ACATGATCAGCACAACAACACAAA 60.142 37.500 0.00 0.00 0.00 2.83
2278 2316 3.768406 TGATCAGCACAACAACACAAAC 58.232 40.909 0.00 0.00 0.00 2.93
2279 2317 3.192212 TGATCAGCACAACAACACAAACA 59.808 39.130 0.00 0.00 0.00 2.83
2280 2318 3.650070 TCAGCACAACAACACAAACAA 57.350 38.095 0.00 0.00 0.00 2.83
2281 2319 3.982475 TCAGCACAACAACACAAACAAA 58.018 36.364 0.00 0.00 0.00 2.83
2282 2320 3.986572 TCAGCACAACAACACAAACAAAG 59.013 39.130 0.00 0.00 0.00 2.77
2283 2321 2.736192 AGCACAACAACACAAACAAAGC 59.264 40.909 0.00 0.00 0.00 3.51
2284 2322 2.478134 GCACAACAACACAAACAAAGCA 59.522 40.909 0.00 0.00 0.00 3.91
2285 2323 3.059325 GCACAACAACACAAACAAAGCAA 60.059 39.130 0.00 0.00 0.00 3.91
2286 2324 4.700332 CACAACAACACAAACAAAGCAAG 58.300 39.130 0.00 0.00 0.00 4.01
2287 2325 4.447054 CACAACAACACAAACAAAGCAAGA 59.553 37.500 0.00 0.00 0.00 3.02
2288 2326 5.120519 CACAACAACACAAACAAAGCAAGAT 59.879 36.000 0.00 0.00 0.00 2.40
2289 2327 5.348451 ACAACAACACAAACAAAGCAAGATC 59.652 36.000 0.00 0.00 0.00 2.75
2290 2328 5.070770 ACAACACAAACAAAGCAAGATCA 57.929 34.783 0.00 0.00 0.00 2.92
2291 2329 5.477510 ACAACACAAACAAAGCAAGATCAA 58.522 33.333 0.00 0.00 0.00 2.57
2292 2330 5.931146 ACAACACAAACAAAGCAAGATCAAA 59.069 32.000 0.00 0.00 0.00 2.69
2293 2331 6.128580 ACAACACAAACAAAGCAAGATCAAAC 60.129 34.615 0.00 0.00 0.00 2.93
2294 2332 5.477510 ACACAAACAAAGCAAGATCAAACA 58.522 33.333 0.00 0.00 0.00 2.83
2295 2333 5.931146 ACACAAACAAAGCAAGATCAAACAA 59.069 32.000 0.00 0.00 0.00 2.83
2296 2334 6.426328 ACACAAACAAAGCAAGATCAAACAAA 59.574 30.769 0.00 0.00 0.00 2.83
2297 2335 6.957077 CACAAACAAAGCAAGATCAAACAAAG 59.043 34.615 0.00 0.00 0.00 2.77
2298 2336 5.723492 AACAAAGCAAGATCAAACAAAGC 57.277 34.783 0.00 0.00 0.00 3.51
2299 2337 4.757594 ACAAAGCAAGATCAAACAAAGCA 58.242 34.783 0.00 0.00 0.00 3.91
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 5.121071 TCAATAAACATCGTCGTTAAGCG 57.879 39.130 0.00 0.00 43.01 4.68
7 8 5.952064 CACTCAATAAACATCGTCGTTAAGC 59.048 40.000 0.00 0.00 0.00 3.09
8 9 6.455113 CCCACTCAATAAACATCGTCGTTAAG 60.455 42.308 0.00 0.00 0.00 1.85
9 10 5.349270 CCCACTCAATAAACATCGTCGTTAA 59.651 40.000 0.00 0.00 0.00 2.01
10 11 4.865925 CCCACTCAATAAACATCGTCGTTA 59.134 41.667 0.00 0.00 0.00 3.18
11 12 3.682858 CCCACTCAATAAACATCGTCGTT 59.317 43.478 0.00 0.00 0.00 3.85
12 13 3.056393 TCCCACTCAATAAACATCGTCGT 60.056 43.478 0.00 0.00 0.00 4.34
13 14 3.517602 TCCCACTCAATAAACATCGTCG 58.482 45.455 0.00 0.00 0.00 5.12
14 15 5.175859 TCTTCCCACTCAATAAACATCGTC 58.824 41.667 0.00 0.00 0.00 4.20
15 16 5.046591 TCTCTTCCCACTCAATAAACATCGT 60.047 40.000 0.00 0.00 0.00 3.73
16 17 5.419542 TCTCTTCCCACTCAATAAACATCG 58.580 41.667 0.00 0.00 0.00 3.84
17 18 9.566432 AATATCTCTTCCCACTCAATAAACATC 57.434 33.333 0.00 0.00 0.00 3.06
18 19 9.347240 CAATATCTCTTCCCACTCAATAAACAT 57.653 33.333 0.00 0.00 0.00 2.71
19 20 7.283127 GCAATATCTCTTCCCACTCAATAAACA 59.717 37.037 0.00 0.00 0.00 2.83
20 21 7.500559 AGCAATATCTCTTCCCACTCAATAAAC 59.499 37.037 0.00 0.00 0.00 2.01
21 22 7.577303 AGCAATATCTCTTCCCACTCAATAAA 58.423 34.615 0.00 0.00 0.00 1.40
22 23 7.141758 AGCAATATCTCTTCCCACTCAATAA 57.858 36.000 0.00 0.00 0.00 1.40
23 24 6.753913 AGCAATATCTCTTCCCACTCAATA 57.246 37.500 0.00 0.00 0.00 1.90
24 25 5.643421 AGCAATATCTCTTCCCACTCAAT 57.357 39.130 0.00 0.00 0.00 2.57
25 26 5.431765 GAAGCAATATCTCTTCCCACTCAA 58.568 41.667 5.90 0.00 34.22 3.02
26 27 4.442052 CGAAGCAATATCTCTTCCCACTCA 60.442 45.833 9.84 0.00 36.29 3.41
27 28 4.054671 CGAAGCAATATCTCTTCCCACTC 58.945 47.826 9.84 0.00 36.29 3.51
28 29 3.706594 TCGAAGCAATATCTCTTCCCACT 59.293 43.478 9.84 0.00 36.29 4.00
29 30 3.804873 GTCGAAGCAATATCTCTTCCCAC 59.195 47.826 9.84 5.33 36.29 4.61
30 31 3.706594 AGTCGAAGCAATATCTCTTCCCA 59.293 43.478 9.84 0.00 36.29 4.37
31 32 4.329462 AGTCGAAGCAATATCTCTTCCC 57.671 45.455 9.84 3.74 36.29 3.97
32 33 6.682746 TCATAGTCGAAGCAATATCTCTTCC 58.317 40.000 9.84 0.87 36.29 3.46
33 34 6.806249 CCTCATAGTCGAAGCAATATCTCTTC 59.194 42.308 0.00 6.78 36.31 2.87
34 35 6.686630 CCTCATAGTCGAAGCAATATCTCTT 58.313 40.000 0.00 0.00 0.00 2.85
35 36 5.336372 GCCTCATAGTCGAAGCAATATCTCT 60.336 44.000 0.00 0.00 0.00 3.10
36 37 4.862018 GCCTCATAGTCGAAGCAATATCTC 59.138 45.833 0.00 0.00 0.00 2.75
37 38 4.322349 GGCCTCATAGTCGAAGCAATATCT 60.322 45.833 0.00 0.00 0.00 1.98
38 39 3.929610 GGCCTCATAGTCGAAGCAATATC 59.070 47.826 0.00 0.00 0.00 1.63
39 40 3.580458 AGGCCTCATAGTCGAAGCAATAT 59.420 43.478 0.00 0.00 0.00 1.28
40 41 2.965831 AGGCCTCATAGTCGAAGCAATA 59.034 45.455 0.00 0.00 0.00 1.90
41 42 1.765314 AGGCCTCATAGTCGAAGCAAT 59.235 47.619 0.00 0.00 0.00 3.56
42 43 1.195115 AGGCCTCATAGTCGAAGCAA 58.805 50.000 0.00 0.00 0.00 3.91
43 44 1.195115 AAGGCCTCATAGTCGAAGCA 58.805 50.000 5.23 0.00 0.00 3.91
44 45 1.936547 CAAAGGCCTCATAGTCGAAGC 59.063 52.381 5.23 0.00 0.00 3.86
45 46 2.932614 CACAAAGGCCTCATAGTCGAAG 59.067 50.000 5.23 0.00 0.00 3.79
46 47 2.354704 CCACAAAGGCCTCATAGTCGAA 60.355 50.000 5.23 0.00 0.00 3.71
47 48 1.207089 CCACAAAGGCCTCATAGTCGA 59.793 52.381 5.23 0.00 0.00 4.20
48 49 1.066143 ACCACAAAGGCCTCATAGTCG 60.066 52.381 5.23 0.00 43.14 4.18
49 50 2.359900 CACCACAAAGGCCTCATAGTC 58.640 52.381 5.23 0.00 43.14 2.59
50 51 1.004745 CCACCACAAAGGCCTCATAGT 59.995 52.381 5.23 0.00 43.14 2.12
51 52 1.755179 CCACCACAAAGGCCTCATAG 58.245 55.000 5.23 0.00 43.14 2.23
52 53 0.323360 GCCACCACAAAGGCCTCATA 60.323 55.000 5.23 0.00 45.18 2.15
53 54 1.607467 GCCACCACAAAGGCCTCAT 60.607 57.895 5.23 0.00 45.18 2.90
54 55 2.203480 GCCACCACAAAGGCCTCA 60.203 61.111 5.23 0.00 45.18 3.86
59 60 3.353836 CGGACGCCACCACAAAGG 61.354 66.667 0.00 0.00 45.67 3.11
60 61 1.671054 ATCGGACGCCACCACAAAG 60.671 57.895 0.00 0.00 0.00 2.77
61 62 1.963855 CATCGGACGCCACCACAAA 60.964 57.895 0.00 0.00 0.00 2.83
62 63 2.358125 CATCGGACGCCACCACAA 60.358 61.111 0.00 0.00 0.00 3.33
65 66 4.758251 CTGCATCGGACGCCACCA 62.758 66.667 0.00 0.00 0.00 4.17
67 68 2.845752 TAACCTGCATCGGACGCCAC 62.846 60.000 0.00 0.00 0.00 5.01
68 69 2.173758 TTAACCTGCATCGGACGCCA 62.174 55.000 0.00 0.00 0.00 5.69
81 82 3.762823 CTCCTGACCTAGTTCGTTAACCT 59.237 47.826 0.00 0.00 36.15 3.50
82 83 3.119209 CCTCCTGACCTAGTTCGTTAACC 60.119 52.174 0.00 0.00 36.15 2.85
84 85 4.038271 TCCTCCTGACCTAGTTCGTTAA 57.962 45.455 0.00 0.00 0.00 2.01
86 87 2.599408 TCCTCCTGACCTAGTTCGTT 57.401 50.000 0.00 0.00 0.00 3.85
88 89 2.359531 GTCATCCTCCTGACCTAGTTCG 59.640 54.545 0.00 0.00 39.72 3.95
90 91 2.291670 ACGTCATCCTCCTGACCTAGTT 60.292 50.000 0.00 0.00 42.06 2.24
94 95 0.898320 CAACGTCATCCTCCTGACCT 59.102 55.000 0.00 0.00 42.06 3.85
96 97 1.546476 AGACAACGTCATCCTCCTGAC 59.454 52.381 0.00 0.00 41.73 3.51
97 98 1.546029 CAGACAACGTCATCCTCCTGA 59.454 52.381 0.00 0.00 34.60 3.86
99 100 0.898320 CCAGACAACGTCATCCTCCT 59.102 55.000 0.00 0.00 34.60 3.69
108 109 2.657296 CACGACGCCAGACAACGT 60.657 61.111 0.00 0.00 46.91 3.99
109 110 3.403057 CCACGACGCCAGACAACG 61.403 66.667 0.00 0.00 0.00 4.10
111 112 2.279851 CACCACGACGCCAGACAA 60.280 61.111 0.00 0.00 0.00 3.18
145 150 0.037790 TTGACGCATCGACCATGTCA 60.038 50.000 7.32 7.32 37.76 3.58
150 155 1.731709 CAGAAATTGACGCATCGACCA 59.268 47.619 0.00 0.00 0.00 4.02
154 159 5.142635 TCATAACAGAAATTGACGCATCG 57.857 39.130 0.00 0.00 0.00 3.84
157 162 6.403527 CCATCTTCATAACAGAAATTGACGCA 60.404 38.462 0.00 0.00 0.00 5.24
158 163 5.967674 CCATCTTCATAACAGAAATTGACGC 59.032 40.000 0.00 0.00 0.00 5.19
160 165 8.066595 CGATCCATCTTCATAACAGAAATTGAC 58.933 37.037 0.00 0.00 0.00 3.18
166 171 5.128663 TCACCGATCCATCTTCATAACAGAA 59.871 40.000 0.00 0.00 0.00 3.02
171 176 6.049149 GTCTTTCACCGATCCATCTTCATAA 58.951 40.000 0.00 0.00 0.00 1.90
173 178 4.446371 GTCTTTCACCGATCCATCTTCAT 58.554 43.478 0.00 0.00 0.00 2.57
180 185 1.079405 GCCGTCTTTCACCGATCCA 60.079 57.895 0.00 0.00 0.00 3.41
190 195 2.813908 GTCATCGCCGCCGTCTTT 60.814 61.111 0.00 0.00 35.54 2.52
195 200 3.853330 CTTGTGTCATCGCCGCCG 61.853 66.667 0.00 0.00 0.00 6.46
213 222 2.922950 TACAAACCGCTCCGACGCT 61.923 57.895 0.00 0.00 0.00 5.07
231 240 2.000048 ACCACATACTGGATTTGGGGT 59.000 47.619 9.77 0.00 43.95 4.95
237 246 3.831911 CCAACCAAACCACATACTGGATT 59.168 43.478 0.00 0.00 43.95 3.01
239 248 2.443632 TCCAACCAAACCACATACTGGA 59.556 45.455 0.00 0.00 43.95 3.86
242 251 2.514803 GCTCCAACCAAACCACATACT 58.485 47.619 0.00 0.00 0.00 2.12
251 260 2.434331 CCGGAGGCTCCAACCAAA 59.566 61.111 31.69 0.00 46.14 3.28
263 272 4.608948 ATCCTAACATCTAAAGCCGGAG 57.391 45.455 5.05 0.00 0.00 4.63
273 282 7.548427 CAGATATCGCATCAAATCCTAACATCT 59.452 37.037 0.00 0.00 0.00 2.90
286 295 7.278646 GCCTAATATCAAACAGATATCGCATCA 59.721 37.037 0.00 0.00 46.72 3.07
288 297 7.334090 AGCCTAATATCAAACAGATATCGCAT 58.666 34.615 0.00 0.00 46.72 4.73
291 300 8.763049 TCAAGCCTAATATCAAACAGATATCG 57.237 34.615 0.00 0.00 46.72 2.92
297 306 8.491152 CGATAGTTCAAGCCTAATATCAAACAG 58.509 37.037 0.00 0.00 0.00 3.16
300 309 6.426937 GCCGATAGTTCAAGCCTAATATCAAA 59.573 38.462 0.00 0.00 0.00 2.69
301 310 5.932303 GCCGATAGTTCAAGCCTAATATCAA 59.068 40.000 0.00 0.00 0.00 2.57
303 312 5.348997 GTGCCGATAGTTCAAGCCTAATATC 59.651 44.000 0.00 0.00 0.00 1.63
304 313 5.012148 AGTGCCGATAGTTCAAGCCTAATAT 59.988 40.000 0.00 0.00 0.00 1.28
306 315 3.134804 AGTGCCGATAGTTCAAGCCTAAT 59.865 43.478 0.00 0.00 0.00 1.73
307 316 2.500098 AGTGCCGATAGTTCAAGCCTAA 59.500 45.455 0.00 0.00 0.00 2.69
308 317 2.100916 GAGTGCCGATAGTTCAAGCCTA 59.899 50.000 0.00 0.00 0.00 3.93
309 318 0.905357 AGTGCCGATAGTTCAAGCCT 59.095 50.000 0.00 0.00 0.00 4.58
310 319 1.291132 GAGTGCCGATAGTTCAAGCC 58.709 55.000 0.00 0.00 0.00 4.35
311 320 1.134670 AGGAGTGCCGATAGTTCAAGC 60.135 52.381 0.00 0.00 39.96 4.01
312 321 2.969628 AGGAGTGCCGATAGTTCAAG 57.030 50.000 0.00 0.00 39.96 3.02
313 322 2.565391 TGAAGGAGTGCCGATAGTTCAA 59.435 45.455 0.00 0.00 39.96 2.69
315 324 2.961526 TGAAGGAGTGCCGATAGTTC 57.038 50.000 0.00 0.00 39.96 3.01
316 325 2.766263 TGATGAAGGAGTGCCGATAGTT 59.234 45.455 0.00 0.00 39.96 2.24
317 326 2.388735 TGATGAAGGAGTGCCGATAGT 58.611 47.619 0.00 0.00 39.96 2.12
318 327 3.181471 ACTTGATGAAGGAGTGCCGATAG 60.181 47.826 0.00 0.00 39.96 2.08
319 328 2.766263 ACTTGATGAAGGAGTGCCGATA 59.234 45.455 0.00 0.00 39.96 2.92
320 329 1.556911 ACTTGATGAAGGAGTGCCGAT 59.443 47.619 0.00 0.00 39.96 4.18
321 330 0.976641 ACTTGATGAAGGAGTGCCGA 59.023 50.000 0.00 0.00 39.96 5.54
322 331 1.466167 CAACTTGATGAAGGAGTGCCG 59.534 52.381 0.00 0.00 39.96 5.69
323 332 2.783135 TCAACTTGATGAAGGAGTGCC 58.217 47.619 0.00 0.00 32.95 5.01
324 333 4.574013 CCTATCAACTTGATGAAGGAGTGC 59.426 45.833 13.66 0.00 37.70 4.40
328 337 7.220030 GCTATTCCTATCAACTTGATGAAGGA 58.780 38.462 15.33 15.33 37.70 3.36
338 347 5.105310 ACAACTGACGCTATTCCTATCAACT 60.105 40.000 0.00 0.00 0.00 3.16
339 348 5.109903 ACAACTGACGCTATTCCTATCAAC 58.890 41.667 0.00 0.00 0.00 3.18
341 350 5.109210 CAACAACTGACGCTATTCCTATCA 58.891 41.667 0.00 0.00 0.00 2.15
346 355 5.407387 TCTTAACAACAACTGACGCTATTCC 59.593 40.000 0.00 0.00 0.00 3.01
349 358 5.351465 CCATCTTAACAACAACTGACGCTAT 59.649 40.000 0.00 0.00 0.00 2.97
355 364 3.568007 GCCACCATCTTAACAACAACTGA 59.432 43.478 0.00 0.00 0.00 3.41
358 367 2.890945 AGGCCACCATCTTAACAACAAC 59.109 45.455 5.01 0.00 0.00 3.32
359 368 3.153919 GAGGCCACCATCTTAACAACAA 58.846 45.455 5.01 0.00 0.00 2.83
361 370 2.749621 CTGAGGCCACCATCTTAACAAC 59.250 50.000 5.01 0.00 0.00 3.32
365 374 2.551270 AGTCTGAGGCCACCATCTTAA 58.449 47.619 5.01 0.00 0.00 1.85
366 375 2.254152 AGTCTGAGGCCACCATCTTA 57.746 50.000 5.01 0.00 0.00 2.10
371 380 0.708209 TAGGTAGTCTGAGGCCACCA 59.292 55.000 5.01 0.71 0.00 4.17
372 381 1.861982 TTAGGTAGTCTGAGGCCACC 58.138 55.000 5.01 0.74 0.00 4.61
374 383 3.116096 ACATTAGGTAGTCTGAGGCCA 57.884 47.619 5.01 0.00 0.00 5.36
375 384 4.216708 AGTACATTAGGTAGTCTGAGGCC 58.783 47.826 0.00 0.00 29.37 5.19
376 385 6.063404 AGTAGTACATTAGGTAGTCTGAGGC 58.937 44.000 2.52 0.00 36.94 4.70
377 386 6.711645 GGAGTAGTACATTAGGTAGTCTGAGG 59.288 46.154 2.52 0.00 36.94 3.86
379 388 6.389278 AGGGAGTAGTACATTAGGTAGTCTGA 59.611 42.308 2.52 0.00 36.94 3.27
380 389 6.603224 AGGGAGTAGTACATTAGGTAGTCTG 58.397 44.000 2.52 0.00 36.94 3.51
382 391 6.711645 CAGAGGGAGTAGTACATTAGGTAGTC 59.288 46.154 2.52 0.00 36.94 2.59
384 393 6.603224 ACAGAGGGAGTAGTACATTAGGTAG 58.397 44.000 2.52 0.00 31.13 3.18
385 394 6.587560 ACAGAGGGAGTAGTACATTAGGTA 57.412 41.667 2.52 0.00 0.00 3.08
386 395 5.469210 ACAGAGGGAGTAGTACATTAGGT 57.531 43.478 2.52 0.00 0.00 3.08
387 396 6.380274 TGAAACAGAGGGAGTAGTACATTAGG 59.620 42.308 2.52 0.00 0.00 2.69
388 397 7.406031 TGAAACAGAGGGAGTAGTACATTAG 57.594 40.000 2.52 0.00 0.00 1.73
390 399 6.681729 TTGAAACAGAGGGAGTAGTACATT 57.318 37.500 2.52 0.00 0.00 2.71
391 400 6.681729 TTTGAAACAGAGGGAGTAGTACAT 57.318 37.500 2.52 0.00 0.00 2.29
396 405 6.531948 CGAGTAATTTGAAACAGAGGGAGTAG 59.468 42.308 0.00 0.00 0.00 2.57
406 415 4.052608 TCAGCGACGAGTAATTTGAAACA 58.947 39.130 0.00 0.00 0.00 2.83
410 419 5.407084 TCAATTTCAGCGACGAGTAATTTGA 59.593 36.000 0.00 4.70 0.00 2.69
472 481 2.442212 TCCGAATTACTTGTCGCACA 57.558 45.000 0.00 0.00 35.93 4.57
473 482 2.471749 CGTTCCGAATTACTTGTCGCAC 60.472 50.000 0.00 0.00 35.93 5.34
489 498 1.622312 ACAAAGTACTCCCTCCGTTCC 59.378 52.381 0.00 0.00 0.00 3.62
528 537 6.148948 GGCGATGCATGCAACTATTTTATTA 58.851 36.000 26.68 0.00 0.00 0.98
538 547 1.731433 ATCTGGGCGATGCATGCAAC 61.731 55.000 26.68 21.63 0.00 4.17
539 548 1.454295 ATCTGGGCGATGCATGCAA 60.454 52.632 26.68 8.49 0.00 4.08
540 549 2.190841 CATCTGGGCGATGCATGCA 61.191 57.895 25.04 25.04 42.75 3.96
550 559 1.817099 CCGACTTCTGCATCTGGGC 60.817 63.158 0.00 0.00 0.00 5.36
551 560 1.153289 CCCGACTTCTGCATCTGGG 60.153 63.158 0.00 0.00 0.00 4.45
552 561 1.153289 CCCCGACTTCTGCATCTGG 60.153 63.158 0.00 0.00 0.00 3.86
559 568 1.413077 GAGGATTACCCCCGACTTCTG 59.587 57.143 0.00 0.00 36.73 3.02
562 571 0.342313 AGGAGGATTACCCCCGACTT 59.658 55.000 0.00 0.00 36.73 3.01
565 574 1.841919 GAAAAGGAGGATTACCCCCGA 59.158 52.381 0.00 0.00 36.73 5.14
567 576 5.461516 TTTAGAAAAGGAGGATTACCCCC 57.538 43.478 0.00 0.00 36.73 5.40
593 602 2.578021 AGTCACCACAAGGCCTCATAAT 59.422 45.455 5.23 0.00 39.06 1.28
594 603 1.985159 AGTCACCACAAGGCCTCATAA 59.015 47.619 5.23 0.00 39.06 1.90
634 644 5.705441 CACCTCTAAAATACTGAGCCAACAA 59.295 40.000 0.00 0.00 0.00 2.83
646 656 7.451877 CCTAGTCCTATGAGCACCTCTAAAATA 59.548 40.741 0.00 0.00 0.00 1.40
648 658 5.598830 CCTAGTCCTATGAGCACCTCTAAAA 59.401 44.000 0.00 0.00 0.00 1.52
672 682 2.373540 TACACTTATCCACGCACACC 57.626 50.000 0.00 0.00 0.00 4.16
676 686 3.243602 ACGCATATACACTTATCCACGCA 60.244 43.478 0.00 0.00 0.00 5.24
685 695 4.377021 CCCACATACACGCATATACACTT 58.623 43.478 0.00 0.00 0.00 3.16
686 696 3.802329 GCCCACATACACGCATATACACT 60.802 47.826 0.00 0.00 0.00 3.55
687 697 2.478894 GCCCACATACACGCATATACAC 59.521 50.000 0.00 0.00 0.00 2.90
693 703 0.181114 AGATGCCCACATACACGCAT 59.819 50.000 0.00 0.00 44.36 4.73
697 707 0.461870 TCGCAGATGCCCACATACAC 60.462 55.000 0.00 0.00 36.35 2.90
783 793 2.662156 CGAGCAGTACTTTTCTTCCGAC 59.338 50.000 0.00 0.00 0.00 4.79
823 835 6.434018 AGAAGTATACGTAAAAGCTCGAGT 57.566 37.500 15.13 0.00 0.00 4.18
895 907 0.107945 CTACTCTGGTGCTTCCTGGC 60.108 60.000 0.00 0.00 36.08 4.85
899 911 3.380954 GGTACTACTACTCTGGTGCTTCC 59.619 52.174 0.00 0.00 0.00 3.46
925 937 3.024547 TCGTAGGCTCAATGCTTCTACT 58.975 45.455 0.00 0.00 42.39 2.57
927 939 3.024547 ACTCGTAGGCTCAATGCTTCTA 58.975 45.455 0.00 0.00 42.39 2.10
1045 1064 3.091318 CGGCTTGGATTGAGCTGAT 57.909 52.632 0.00 0.00 46.98 2.90
1110 1129 2.697644 CCCCATGGCTCCTTCCCT 60.698 66.667 6.09 0.00 0.00 4.20
1130 1149 1.053424 TCGGCTGTTACCTTCCAACT 58.947 50.000 0.00 0.00 0.00 3.16
1260 1279 0.978667 TGTTGCCTATGCCGGGACTA 60.979 55.000 2.18 0.00 36.33 2.59
1337 1356 9.350951 AGAAACAACTTAAGTAAACAGGCTTAT 57.649 29.630 8.92 0.00 0.00 1.73
1338 1357 8.741603 AGAAACAACTTAAGTAAACAGGCTTA 57.258 30.769 8.92 0.00 0.00 3.09
1394 1413 1.912110 GTACGCGCAACAAACAAACAA 59.088 42.857 5.73 0.00 0.00 2.83
1399 1418 0.658368 ACATGTACGCGCAACAAACA 59.342 45.000 17.43 8.00 0.00 2.83
1459 1478 7.806014 TCGCAACTTTATTTATCTCAACAAACC 59.194 33.333 0.00 0.00 0.00 3.27
1460 1479 8.722342 TCGCAACTTTATTTATCTCAACAAAC 57.278 30.769 0.00 0.00 0.00 2.93
1558 1581 8.481641 GGGTTGCTTAAAATAGTTTGTTTTACG 58.518 33.333 0.00 0.00 32.48 3.18
1559 1582 9.315525 TGGGTTGCTTAAAATAGTTTGTTTTAC 57.684 29.630 0.00 0.00 32.48 2.01
1560 1583 9.315525 GTGGGTTGCTTAAAATAGTTTGTTTTA 57.684 29.630 0.00 0.00 31.71 1.52
1561 1584 8.044309 AGTGGGTTGCTTAAAATAGTTTGTTTT 58.956 29.630 0.00 0.00 33.67 2.43
1565 1588 7.206687 TGAAGTGGGTTGCTTAAAATAGTTTG 58.793 34.615 0.00 0.00 0.00 2.93
1589 1612 4.326205 CGCGACAATCATAAACTGAGTTG 58.674 43.478 0.00 0.00 37.28 3.16
1710 1733 8.087750 TGATGTAGCCAAAAATGAAAGTTTAGG 58.912 33.333 0.00 0.00 30.03 2.69
1747 1771 4.464951 AGGATTAAAATTCCGGGTTTGGAC 59.535 41.667 0.00 0.00 37.89 4.02
1757 1781 8.575649 TTGGTAGTTCAGAGGATTAAAATTCC 57.424 34.615 0.00 0.00 0.00 3.01
1842 1880 3.154710 CGTGTATCTAGGCACCCATCTA 58.845 50.000 0.00 0.00 32.40 1.98
1845 1883 0.393077 GCGTGTATCTAGGCACCCAT 59.607 55.000 0.00 0.00 32.40 4.00
1846 1884 0.973496 TGCGTGTATCTAGGCACCCA 60.973 55.000 0.00 0.00 36.63 4.51
1853 1891 5.885881 AGAGAAGAACTTGCGTGTATCTAG 58.114 41.667 0.00 0.00 0.00 2.43
1854 1892 5.163642 GGAGAGAAGAACTTGCGTGTATCTA 60.164 44.000 0.00 0.00 0.00 1.98
1855 1893 4.381079 GGAGAGAAGAACTTGCGTGTATCT 60.381 45.833 0.00 0.00 0.00 1.98
1856 1894 3.860536 GGAGAGAAGAACTTGCGTGTATC 59.139 47.826 0.00 0.00 0.00 2.24
1858 1896 2.891580 AGGAGAGAAGAACTTGCGTGTA 59.108 45.455 0.00 0.00 0.00 2.90
1859 1897 1.689273 AGGAGAGAAGAACTTGCGTGT 59.311 47.619 0.00 0.00 0.00 4.49
1861 1899 1.068194 CGAGGAGAGAAGAACTTGCGT 60.068 52.381 0.00 0.00 0.00 5.24
1862 1900 1.200252 TCGAGGAGAGAAGAACTTGCG 59.800 52.381 0.00 0.00 0.00 4.85
1914 1952 2.125512 AGACATTGCTCCGGCGTC 60.126 61.111 6.01 0.00 42.25 5.19
1915 1953 2.434884 CAGACATTGCTCCGGCGT 60.435 61.111 6.01 0.00 42.25 5.68
1927 1965 1.375908 GTTGCGGATGAGGCAGACA 60.376 57.895 0.00 0.00 42.12 3.41
1928 1966 2.456119 CGTTGCGGATGAGGCAGAC 61.456 63.158 0.00 0.00 42.12 3.51
1940 1978 1.632046 AAGATGGTAACGGCGTTGCG 61.632 55.000 33.37 0.00 42.51 4.85
1948 1986 3.306166 GGACAATGTCGAAGATGGTAACG 59.694 47.826 7.35 0.00 40.67 3.18
1956 1994 1.472878 CGGAGAGGACAATGTCGAAGA 59.527 52.381 7.35 0.00 32.65 2.87
1993 2031 1.446445 CCCATGACGTACGGCGAAA 60.446 57.895 21.06 0.07 44.77 3.46
1997 2035 4.807039 ACGCCCATGACGTACGGC 62.807 66.667 21.06 18.72 43.02 5.68
2001 2039 0.951525 CCAAACACGCCCATGACGTA 60.952 55.000 12.45 0.00 42.96 3.57
2004 2042 0.039527 GAACCAAACACGCCCATGAC 60.040 55.000 0.00 0.00 0.00 3.06
2010 2048 0.458260 AAACTGGAACCAAACACGCC 59.542 50.000 0.00 0.00 0.00 5.68
2011 2049 1.555477 CAAACTGGAACCAAACACGC 58.445 50.000 0.00 0.00 0.00 5.34
2012 2050 1.135257 TGCAAACTGGAACCAAACACG 60.135 47.619 0.00 0.00 0.00 4.49
2013 2051 2.663826 TGCAAACTGGAACCAAACAC 57.336 45.000 0.00 0.00 0.00 3.32
2014 2052 2.966050 GTTGCAAACTGGAACCAAACA 58.034 42.857 0.00 0.00 45.32 2.83
2035 2073 1.612726 GGCTGTTGAGATGCAGGAACT 60.613 52.381 0.00 0.00 43.88 3.01
2036 2074 0.807496 GGCTGTTGAGATGCAGGAAC 59.193 55.000 0.00 0.00 33.62 3.62
2037 2075 0.694771 AGGCTGTTGAGATGCAGGAA 59.305 50.000 0.00 0.00 33.62 3.36
2038 2076 0.035725 CAGGCTGTTGAGATGCAGGA 60.036 55.000 6.28 0.00 33.62 3.86
2039 2077 1.030488 CCAGGCTGTTGAGATGCAGG 61.030 60.000 14.43 0.00 33.62 4.85
2040 2078 0.322277 ACCAGGCTGTTGAGATGCAG 60.322 55.000 14.43 0.00 35.93 4.41
2041 2079 0.111061 AACCAGGCTGTTGAGATGCA 59.889 50.000 14.43 0.00 0.00 3.96
2042 2080 1.251251 AAACCAGGCTGTTGAGATGC 58.749 50.000 14.43 0.00 0.00 3.91
2043 2081 3.318839 TCAAAAACCAGGCTGTTGAGATG 59.681 43.478 14.43 5.52 0.00 2.90
2044 2082 3.565307 TCAAAAACCAGGCTGTTGAGAT 58.435 40.909 14.43 0.00 0.00 2.75
2045 2083 3.011566 TCAAAAACCAGGCTGTTGAGA 57.988 42.857 14.43 0.80 0.00 3.27
2046 2084 3.799281 TTCAAAAACCAGGCTGTTGAG 57.201 42.857 14.43 0.00 30.43 3.02
2047 2085 4.440880 CATTTCAAAAACCAGGCTGTTGA 58.559 39.130 14.43 13.39 0.00 3.18
2048 2086 3.002553 GCATTTCAAAAACCAGGCTGTTG 59.997 43.478 14.43 11.20 0.00 3.33
2049 2087 3.205338 GCATTTCAAAAACCAGGCTGTT 58.795 40.909 14.43 5.17 0.00 3.16
2050 2088 2.170187 TGCATTTCAAAAACCAGGCTGT 59.830 40.909 14.43 0.00 0.00 4.40
2051 2089 2.803956 CTGCATTTCAAAAACCAGGCTG 59.196 45.455 7.75 7.75 0.00 4.85
2052 2090 2.807837 GCTGCATTTCAAAAACCAGGCT 60.808 45.455 0.00 0.00 0.00 4.58
2053 2091 1.532437 GCTGCATTTCAAAAACCAGGC 59.468 47.619 0.00 0.00 0.00 4.85
2054 2092 2.145536 GGCTGCATTTCAAAAACCAGG 58.854 47.619 0.50 0.00 0.00 4.45
2055 2093 3.062042 GAGGCTGCATTTCAAAAACCAG 58.938 45.455 0.50 0.00 0.00 4.00
2056 2094 2.433604 TGAGGCTGCATTTCAAAAACCA 59.566 40.909 0.50 0.00 0.00 3.67
2057 2095 3.110447 TGAGGCTGCATTTCAAAAACC 57.890 42.857 0.50 0.00 0.00 3.27
2058 2096 5.220529 GCATATGAGGCTGCATTTCAAAAAC 60.221 40.000 6.97 0.00 38.28 2.43
2059 2097 4.871557 GCATATGAGGCTGCATTTCAAAAA 59.128 37.500 6.97 0.00 38.28 1.94
2060 2098 4.081586 TGCATATGAGGCTGCATTTCAAAA 60.082 37.500 6.97 0.00 43.11 2.44
2061 2099 3.447944 TGCATATGAGGCTGCATTTCAAA 59.552 39.130 6.97 0.00 43.11 2.69
2062 2100 3.025262 TGCATATGAGGCTGCATTTCAA 58.975 40.909 6.97 0.00 43.11 2.69
2063 2101 2.621526 CTGCATATGAGGCTGCATTTCA 59.378 45.455 6.97 2.50 46.48 2.69
2064 2102 3.284323 CTGCATATGAGGCTGCATTTC 57.716 47.619 6.97 0.00 46.48 2.17
2070 2108 1.807142 CATCTGCTGCATATGAGGCTG 59.193 52.381 19.72 12.73 0.00 4.85
2071 2109 2.186532 CATCTGCTGCATATGAGGCT 57.813 50.000 19.72 0.00 0.00 4.58
2082 2120 1.336517 CCAAACAGGTTGCATCTGCTG 60.337 52.381 14.98 12.55 42.66 4.41
2083 2121 0.963962 CCAAACAGGTTGCATCTGCT 59.036 50.000 14.98 3.24 42.66 4.24
2084 2122 3.502237 CCAAACAGGTTGCATCTGC 57.498 52.632 14.98 0.00 42.50 4.26
2094 2132 0.037975 GATGCAGGCAACCAAACAGG 60.038 55.000 0.00 0.00 45.67 4.00
2095 2133 0.387622 CGATGCAGGCAACCAAACAG 60.388 55.000 0.00 0.00 37.17 3.16
2096 2134 1.659233 CGATGCAGGCAACCAAACA 59.341 52.632 0.00 0.00 37.17 2.83
2097 2135 1.734117 GCGATGCAGGCAACCAAAC 60.734 57.895 7.59 0.00 37.17 2.93
2098 2136 1.534336 ATGCGATGCAGGCAACCAAA 61.534 50.000 17.76 0.00 43.65 3.28
2099 2137 0.679321 TATGCGATGCAGGCAACCAA 60.679 50.000 17.76 3.46 43.65 3.67
2100 2138 1.077858 TATGCGATGCAGGCAACCA 60.078 52.632 17.76 5.31 43.65 3.67
2101 2139 0.815213 TCTATGCGATGCAGGCAACC 60.815 55.000 17.76 0.00 43.65 3.77
2102 2140 0.585357 CTCTATGCGATGCAGGCAAC 59.415 55.000 17.76 0.00 43.65 4.17
2103 2141 0.533531 CCTCTATGCGATGCAGGCAA 60.534 55.000 17.76 7.88 43.65 4.52
2104 2142 1.070275 CCTCTATGCGATGCAGGCA 59.930 57.895 16.41 16.41 43.65 4.75
2105 2143 1.670406 CCCTCTATGCGATGCAGGC 60.670 63.158 5.63 5.63 43.65 4.85
2106 2144 1.004080 CCCCTCTATGCGATGCAGG 60.004 63.158 0.00 0.00 43.65 4.85
2107 2145 1.670406 GCCCCTCTATGCGATGCAG 60.670 63.158 0.00 0.00 43.65 4.41
2108 2146 2.427320 GCCCCTCTATGCGATGCA 59.573 61.111 0.00 0.00 44.86 3.96
2109 2147 1.963338 GTGCCCCTCTATGCGATGC 60.963 63.158 0.00 0.00 0.00 3.91
2110 2148 0.107456 AAGTGCCCCTCTATGCGATG 59.893 55.000 0.00 0.00 0.00 3.84
2111 2149 1.344763 GTAAGTGCCCCTCTATGCGAT 59.655 52.381 0.00 0.00 0.00 4.58
2112 2150 0.750850 GTAAGTGCCCCTCTATGCGA 59.249 55.000 0.00 0.00 0.00 5.10
2113 2151 0.249911 GGTAAGTGCCCCTCTATGCG 60.250 60.000 0.00 0.00 0.00 4.73
2114 2152 0.108774 GGGTAAGTGCCCCTCTATGC 59.891 60.000 0.00 0.00 42.89 3.14
2132 2170 1.445518 GCAACCAAACAACAGGGGG 59.554 57.895 0.00 0.00 0.00 5.40
2133 2171 1.333636 TGGCAACCAAACAACAGGGG 61.334 55.000 0.00 0.00 0.00 4.79
2134 2172 0.758123 ATGGCAACCAAACAACAGGG 59.242 50.000 0.00 0.00 36.95 4.45
2135 2173 2.618442 AATGGCAACCAAACAACAGG 57.382 45.000 0.00 0.00 36.95 4.00
2136 2174 4.155644 ACAAAAATGGCAACCAAACAACAG 59.844 37.500 0.00 0.00 36.95 3.16
2137 2175 4.074970 ACAAAAATGGCAACCAAACAACA 58.925 34.783 0.00 0.00 36.95 3.33
2138 2176 4.410448 CACAAAAATGGCAACCAAACAAC 58.590 39.130 0.00 0.00 36.95 3.32
2139 2177 3.119708 GCACAAAAATGGCAACCAAACAA 60.120 39.130 0.00 0.00 36.95 2.83
2140 2178 2.421424 GCACAAAAATGGCAACCAAACA 59.579 40.909 0.00 0.00 36.95 2.83
2141 2179 2.682352 AGCACAAAAATGGCAACCAAAC 59.318 40.909 0.00 0.00 36.95 2.93
2142 2180 2.996631 AGCACAAAAATGGCAACCAAA 58.003 38.095 0.00 0.00 36.95 3.28
2143 2181 2.706339 AGCACAAAAATGGCAACCAA 57.294 40.000 0.00 0.00 36.95 3.67
2144 2182 2.706339 AAGCACAAAAATGGCAACCA 57.294 40.000 0.00 0.00 38.19 3.67
2145 2183 3.066380 CCTAAGCACAAAAATGGCAACC 58.934 45.455 0.00 0.00 0.00 3.77
2146 2184 3.066380 CCCTAAGCACAAAAATGGCAAC 58.934 45.455 0.00 0.00 0.00 4.17
2147 2185 2.703007 ACCCTAAGCACAAAAATGGCAA 59.297 40.909 0.00 0.00 0.00 4.52
2148 2186 2.036992 CACCCTAAGCACAAAAATGGCA 59.963 45.455 0.00 0.00 0.00 4.92
2149 2187 2.037121 ACACCCTAAGCACAAAAATGGC 59.963 45.455 0.00 0.00 0.00 4.40
2150 2188 3.320541 TCACACCCTAAGCACAAAAATGG 59.679 43.478 0.00 0.00 0.00 3.16
2151 2189 4.549458 CTCACACCCTAAGCACAAAAATG 58.451 43.478 0.00 0.00 0.00 2.32
2152 2190 3.005791 GCTCACACCCTAAGCACAAAAAT 59.994 43.478 0.00 0.00 36.06 1.82
2153 2191 2.360801 GCTCACACCCTAAGCACAAAAA 59.639 45.455 0.00 0.00 36.06 1.94
2154 2192 1.953686 GCTCACACCCTAAGCACAAAA 59.046 47.619 0.00 0.00 36.06 2.44
2155 2193 1.133945 TGCTCACACCCTAAGCACAAA 60.134 47.619 0.00 0.00 40.91 2.83
2156 2194 0.472044 TGCTCACACCCTAAGCACAA 59.528 50.000 0.00 0.00 40.91 3.33
2157 2195 0.035317 CTGCTCACACCCTAAGCACA 59.965 55.000 0.00 0.00 40.91 4.57
2158 2196 0.321671 TCTGCTCACACCCTAAGCAC 59.678 55.000 0.00 0.00 40.91 4.40
2159 2197 1.065926 CATCTGCTCACACCCTAAGCA 60.066 52.381 0.00 0.00 43.40 3.91
2160 2198 1.661341 CATCTGCTCACACCCTAAGC 58.339 55.000 0.00 0.00 36.56 3.09
2161 2199 1.065926 TGCATCTGCTCACACCCTAAG 60.066 52.381 3.53 0.00 42.66 2.18
2162 2200 0.983467 TGCATCTGCTCACACCCTAA 59.017 50.000 3.53 0.00 42.66 2.69
2163 2201 0.983467 TTGCATCTGCTCACACCCTA 59.017 50.000 3.53 0.00 42.66 3.53
2164 2202 0.111061 TTTGCATCTGCTCACACCCT 59.889 50.000 3.53 0.00 42.66 4.34
2165 2203 0.242017 GTTTGCATCTGCTCACACCC 59.758 55.000 3.53 0.00 42.66 4.61
2166 2204 1.242076 AGTTTGCATCTGCTCACACC 58.758 50.000 3.53 0.00 42.66 4.16
2167 2205 2.291465 TGAAGTTTGCATCTGCTCACAC 59.709 45.455 3.53 0.00 42.66 3.82
2168 2206 2.551032 CTGAAGTTTGCATCTGCTCACA 59.449 45.455 3.53 0.00 42.66 3.58
2169 2207 2.667724 GCTGAAGTTTGCATCTGCTCAC 60.668 50.000 9.02 0.48 42.66 3.51
2170 2208 1.538512 GCTGAAGTTTGCATCTGCTCA 59.461 47.619 9.02 0.00 42.66 4.26
2171 2209 1.811359 AGCTGAAGTTTGCATCTGCTC 59.189 47.619 12.15 0.53 44.38 4.26
2172 2210 1.906990 AGCTGAAGTTTGCATCTGCT 58.093 45.000 12.15 12.15 43.35 4.24
2173 2211 1.268899 ACAGCTGAAGTTTGCATCTGC 59.731 47.619 23.35 8.40 39.82 4.26
2174 2212 3.637998 AACAGCTGAAGTTTGCATCTG 57.362 42.857 23.35 0.00 36.03 2.90
2175 2213 3.973657 CAAACAGCTGAAGTTTGCATCT 58.026 40.909 23.35 0.00 46.16 2.90
2181 2219 2.233431 TGCAACCAAACAGCTGAAGTTT 59.767 40.909 23.35 7.93 39.61 2.66
2182 2220 1.824230 TGCAACCAAACAGCTGAAGTT 59.176 42.857 23.35 14.30 0.00 2.66
2183 2221 1.473258 TGCAACCAAACAGCTGAAGT 58.527 45.000 23.35 8.76 0.00 3.01
2184 2222 2.582728 TTGCAACCAAACAGCTGAAG 57.417 45.000 23.35 9.25 0.00 3.02
2198 2236 6.323266 AGTATAACACAAACGTTGTTTGCAA 58.677 32.000 19.25 0.00 43.23 4.08
2199 2237 5.881447 AGTATAACACAAACGTTGTTTGCA 58.119 33.333 19.25 5.91 43.23 4.08
2200 2238 5.966503 TGAGTATAACACAAACGTTGTTTGC 59.033 36.000 19.25 4.61 43.23 3.68
2201 2239 6.412653 GGTGAGTATAACACAAACGTTGTTTG 59.587 38.462 18.09 18.09 43.23 2.93
2202 2240 6.458615 GGGTGAGTATAACACAAACGTTGTTT 60.459 38.462 9.22 0.16 43.23 2.83
2203 2241 5.007921 GGGTGAGTATAACACAAACGTTGTT 59.992 40.000 0.00 5.35 43.23 2.83
2204 2242 4.512571 GGGTGAGTATAACACAAACGTTGT 59.487 41.667 0.00 0.00 46.75 3.32
2205 2243 4.083696 GGGGTGAGTATAACACAAACGTTG 60.084 45.833 0.00 0.00 0.00 4.10
2206 2244 4.067192 GGGGTGAGTATAACACAAACGTT 58.933 43.478 0.00 0.00 0.00 3.99
2207 2245 3.071312 TGGGGTGAGTATAACACAAACGT 59.929 43.478 11.61 0.00 0.00 3.99
2208 2246 3.666274 TGGGGTGAGTATAACACAAACG 58.334 45.455 11.61 0.00 0.00 3.60
2209 2247 5.708230 TGAATGGGGTGAGTATAACACAAAC 59.292 40.000 11.61 4.15 0.00 2.93
2210 2248 5.882040 TGAATGGGGTGAGTATAACACAAA 58.118 37.500 11.61 0.53 0.00 2.83
2211 2249 5.506730 TGAATGGGGTGAGTATAACACAA 57.493 39.130 11.61 0.79 0.00 3.33
2212 2250 5.506730 TTGAATGGGGTGAGTATAACACA 57.493 39.130 11.61 0.00 0.00 3.72
2213 2251 6.377146 ACATTTGAATGGGGTGAGTATAACAC 59.623 38.462 8.44 0.00 40.70 3.32
2214 2252 6.376864 CACATTTGAATGGGGTGAGTATAACA 59.623 38.462 8.44 0.00 40.70 2.41
2215 2253 6.795399 CACATTTGAATGGGGTGAGTATAAC 58.205 40.000 8.44 0.00 40.70 1.89
2226 2264 0.249955 GGCCACCACATTTGAATGGG 59.750 55.000 0.00 3.97 40.59 4.00
2227 2265 1.269012 AGGCCACCACATTTGAATGG 58.731 50.000 5.01 0.00 40.70 3.16
2228 2266 3.368323 GGTAAGGCCACCACATTTGAATG 60.368 47.826 5.01 2.29 38.55 2.67
2229 2267 2.831526 GGTAAGGCCACCACATTTGAAT 59.168 45.455 5.01 0.00 38.55 2.57
2230 2268 2.243810 GGTAAGGCCACCACATTTGAA 58.756 47.619 5.01 0.00 38.55 2.69
2231 2269 1.145945 TGGTAAGGCCACCACATTTGA 59.854 47.619 10.88 0.00 43.76 2.69
2232 2270 1.626686 TGGTAAGGCCACCACATTTG 58.373 50.000 10.88 0.00 43.76 2.32
2241 2279 0.998928 ATCATGTGGTGGTAAGGCCA 59.001 50.000 5.01 0.00 46.95 5.36
2242 2280 1.064758 TGATCATGTGGTGGTAAGGCC 60.065 52.381 0.00 0.00 37.90 5.19
2243 2281 2.292267 CTGATCATGTGGTGGTAAGGC 58.708 52.381 0.00 0.00 0.00 4.35
2244 2282 2.292267 GCTGATCATGTGGTGGTAAGG 58.708 52.381 0.00 0.00 0.00 2.69
2245 2283 2.679837 GTGCTGATCATGTGGTGGTAAG 59.320 50.000 0.00 0.00 0.00 2.34
2246 2284 2.039613 TGTGCTGATCATGTGGTGGTAA 59.960 45.455 0.00 0.00 0.00 2.85
2247 2285 1.627834 TGTGCTGATCATGTGGTGGTA 59.372 47.619 0.00 0.00 0.00 3.25
2248 2286 0.401356 TGTGCTGATCATGTGGTGGT 59.599 50.000 0.00 0.00 0.00 4.16
2249 2287 1.200716 GTTGTGCTGATCATGTGGTGG 59.799 52.381 0.00 0.00 0.00 4.61
2250 2288 1.881324 TGTTGTGCTGATCATGTGGTG 59.119 47.619 0.00 0.00 0.00 4.17
2251 2289 2.275134 TGTTGTGCTGATCATGTGGT 57.725 45.000 0.00 0.00 0.00 4.16
2252 2290 2.293955 TGTTGTTGTGCTGATCATGTGG 59.706 45.455 0.00 0.00 0.00 4.17
2253 2291 3.243134 TGTGTTGTTGTGCTGATCATGTG 60.243 43.478 0.00 0.00 0.00 3.21
2254 2292 2.950975 TGTGTTGTTGTGCTGATCATGT 59.049 40.909 0.00 0.00 0.00 3.21
2255 2293 3.629438 TGTGTTGTTGTGCTGATCATG 57.371 42.857 0.00 0.00 0.00 3.07
2256 2294 4.142204 TGTTTGTGTTGTTGTGCTGATCAT 60.142 37.500 0.00 0.00 0.00 2.45
2257 2295 3.192212 TGTTTGTGTTGTTGTGCTGATCA 59.808 39.130 0.00 0.00 0.00 2.92
2258 2296 3.768406 TGTTTGTGTTGTTGTGCTGATC 58.232 40.909 0.00 0.00 0.00 2.92
2259 2297 3.865011 TGTTTGTGTTGTTGTGCTGAT 57.135 38.095 0.00 0.00 0.00 2.90
2260 2298 3.650070 TTGTTTGTGTTGTTGTGCTGA 57.350 38.095 0.00 0.00 0.00 4.26
2261 2299 3.423384 GCTTTGTTTGTGTTGTTGTGCTG 60.423 43.478 0.00 0.00 0.00 4.41
2262 2300 2.736192 GCTTTGTTTGTGTTGTTGTGCT 59.264 40.909 0.00 0.00 0.00 4.40
2263 2301 2.478134 TGCTTTGTTTGTGTTGTTGTGC 59.522 40.909 0.00 0.00 0.00 4.57
2264 2302 4.447054 TCTTGCTTTGTTTGTGTTGTTGTG 59.553 37.500 0.00 0.00 0.00 3.33
2265 2303 4.626042 TCTTGCTTTGTTTGTGTTGTTGT 58.374 34.783 0.00 0.00 0.00 3.32
2266 2304 5.348179 TGATCTTGCTTTGTTTGTGTTGTTG 59.652 36.000 0.00 0.00 0.00 3.33
2267 2305 5.477510 TGATCTTGCTTTGTTTGTGTTGTT 58.522 33.333 0.00 0.00 0.00 2.83
2268 2306 5.070770 TGATCTTGCTTTGTTTGTGTTGT 57.929 34.783 0.00 0.00 0.00 3.32
2269 2307 6.128607 TGTTTGATCTTGCTTTGTTTGTGTTG 60.129 34.615 0.00 0.00 0.00 3.33
2270 2308 5.931146 TGTTTGATCTTGCTTTGTTTGTGTT 59.069 32.000 0.00 0.00 0.00 3.32
2271 2309 5.477510 TGTTTGATCTTGCTTTGTTTGTGT 58.522 33.333 0.00 0.00 0.00 3.72
2272 2310 6.406093 TTGTTTGATCTTGCTTTGTTTGTG 57.594 33.333 0.00 0.00 0.00 3.33
2273 2311 6.402442 GCTTTGTTTGATCTTGCTTTGTTTGT 60.402 34.615 0.00 0.00 0.00 2.83
2274 2312 5.961263 GCTTTGTTTGATCTTGCTTTGTTTG 59.039 36.000 0.00 0.00 0.00 2.93
2275 2313 5.642919 TGCTTTGTTTGATCTTGCTTTGTTT 59.357 32.000 0.00 0.00 0.00 2.83
2276 2314 5.177326 TGCTTTGTTTGATCTTGCTTTGTT 58.823 33.333 0.00 0.00 0.00 2.83
2277 2315 4.757594 TGCTTTGTTTGATCTTGCTTTGT 58.242 34.783 0.00 0.00 0.00 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.