Multiple sequence alignment - TraesCS3B01G181600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G181600 chr3B 100.000 3147 0 0 1 3147 190489487 190492633 0.000000e+00 5812.0
1 TraesCS3B01G181600 chr3B 92.063 441 34 1 2707 3147 190499079 190499518 1.240000e-173 619.0
2 TraesCS3B01G181600 chr3B 83.684 190 19 6 2526 2705 27473786 27473973 5.400000e-38 169.0
3 TraesCS3B01G181600 chr3B 86.301 146 19 1 2526 2670 20449668 20449523 1.170000e-34 158.0
4 TraesCS3B01G181600 chr3D 94.458 2436 80 23 1 2397 134174098 134176517 0.000000e+00 3699.0
5 TraesCS3B01G181600 chr3D 90.724 442 38 3 2707 3147 427823154 427823593 1.260000e-163 586.0
6 TraesCS3B01G181600 chr3A 93.295 2431 91 24 1 2397 147811801 147814193 0.000000e+00 3520.0
7 TraesCS3B01G181600 chr7B 91.383 441 37 1 2707 3147 500722090 500721651 1.250000e-168 603.0
8 TraesCS3B01G181600 chr7B 81.579 190 23 5 2526 2705 332010676 332010489 2.530000e-31 147.0
9 TraesCS3B01G181600 chr6D 90.745 443 37 3 2707 3147 413407960 413407520 3.500000e-164 588.0
10 TraesCS3B01G181600 chr6D 86.275 102 12 2 2602 2702 85546461 85546561 3.320000e-20 110.0
11 TraesCS3B01G181600 chr2D 90.724 442 39 2 2707 3147 299912677 299913117 3.500000e-164 588.0
12 TraesCS3B01G181600 chr4D 90.519 443 37 4 2707 3147 445687877 445687438 5.850000e-162 580.0
13 TraesCS3B01G181600 chr4D 80.117 171 30 4 2537 2705 94381891 94382059 1.190000e-24 124.0
14 TraesCS3B01G181600 chr4D 89.796 49 4 1 2604 2651 25428597 25428645 9.420000e-06 62.1
15 TraesCS3B01G181600 chr1B 90.293 443 39 4 2707 3147 520713942 520713502 7.570000e-161 577.0
16 TraesCS3B01G181600 chr1B 86.792 53 7 0 2245 2297 358857166 358857114 3.390000e-05 60.2
17 TraesCS3B01G181600 chr4B 90.179 448 35 6 2702 3147 592273641 592274081 2.720000e-160 575.0
18 TraesCS3B01G181600 chr4B 88.696 115 8 5 2412 2523 138472101 138471989 5.470000e-28 135.0
19 TraesCS3B01G181600 chr7D 90.271 442 37 5 2707 3146 571292481 571292044 9.790000e-160 573.0
20 TraesCS3B01G181600 chr6A 80.696 316 40 16 2410 2705 558917409 558917095 3.160000e-55 226.0
21 TraesCS3B01G181600 chr6A 77.483 302 49 17 2410 2701 583027050 583026758 2.510000e-36 163.0
22 TraesCS3B01G181600 chr5B 83.152 184 23 5 2526 2701 659479055 659478872 9.030000e-36 161.0
23 TraesCS3B01G181600 chr1A 81.768 181 22 3 2534 2705 504066567 504066389 1.180000e-29 141.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G181600 chr3B 190489487 190492633 3146 False 5812 5812 100.000 1 3147 1 chr3B.!!$F2 3146
1 TraesCS3B01G181600 chr3D 134174098 134176517 2419 False 3699 3699 94.458 1 2397 1 chr3D.!!$F1 2396
2 TraesCS3B01G181600 chr3A 147811801 147814193 2392 False 3520 3520 93.295 1 2397 1 chr3A.!!$F1 2396

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
669 691 0.39606 GCCATCTCCCACCAGATCTC 59.604 60.0 0.0 0.0 30.07 2.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2243 2305 0.591741 GGATAAGCGACGACACGAGG 60.592 60.0 0.0 0.0 35.09 4.63 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
196 197 2.202298 CCGGTCGAAATGCGCAAC 60.202 61.111 17.11 7.54 40.61 4.17
351 356 6.350528 GGCTATGATCCTGATACGATTTCTCA 60.351 42.308 0.00 0.00 0.00 3.27
365 370 2.435586 CTCACCTTCCCAGCTGCG 60.436 66.667 8.66 0.00 0.00 5.18
384 389 2.096174 GCGTCCCGTTTTGTATATGCAA 59.904 45.455 1.68 1.68 0.00 4.08
385 390 3.676540 CGTCCCGTTTTGTATATGCAAC 58.323 45.455 5.66 0.00 0.00 4.17
386 391 3.125487 CGTCCCGTTTTGTATATGCAACA 59.875 43.478 5.66 0.00 0.00 3.33
459 469 5.396362 CGATTTTGTTAATGATTAGCAGCCG 59.604 40.000 2.13 2.32 0.00 5.52
491 507 1.227263 GTACTCGGGCGCATGATGT 60.227 57.895 10.83 8.77 0.00 3.06
669 691 0.396060 GCCATCTCCCACCAGATCTC 59.604 60.000 0.00 0.00 30.07 2.75
673 695 1.798626 TCTCCCACCAGATCTCCATG 58.201 55.000 0.00 0.00 0.00 3.66
1024 1060 4.539870 CCATCGTCGGTGTATATAAACGT 58.460 43.478 4.52 0.00 0.00 3.99
1098 1134 1.741401 CGGCGAGATGTGCTTGGAA 60.741 57.895 0.00 0.00 0.00 3.53
1317 1362 2.802667 CGCATCGTCTTTCCAGCCG 61.803 63.158 0.00 0.00 0.00 5.52
1320 1365 1.278238 CATCGTCTTTCCAGCCGTAC 58.722 55.000 0.00 0.00 0.00 3.67
1381 1427 3.363673 GCATCAGATGACATGTATGCGTG 60.364 47.826 15.12 0.95 37.62 5.34
1491 1537 0.679002 ACTACGCGGAGAACCTGCTA 60.679 55.000 28.55 0.00 35.03 3.49
1560 1606 4.808238 GACTCGTCGTCGTCGGGC 62.808 72.222 11.66 1.44 38.33 6.13
1703 1752 1.360551 CCACGGTGAGCTCGATAGG 59.639 63.158 10.28 3.46 0.00 2.57
1801 1852 5.221621 CCAGAGGAAGGGCTTAGAATTAGAG 60.222 48.000 0.00 0.00 0.00 2.43
1810 1864 6.948886 AGGGCTTAGAATTAGAGTGATCGATA 59.051 38.462 0.00 0.00 0.00 2.92
1864 1918 3.611530 GCTGCTTAATTTGCTGACGGAAA 60.612 43.478 11.96 0.00 34.88 3.13
1915 1969 2.871133 TGACTGATAAACGTACGCTGG 58.129 47.619 16.72 1.52 0.00 4.85
1916 1970 2.229543 TGACTGATAAACGTACGCTGGT 59.770 45.455 16.72 4.83 0.00 4.00
1919 1973 3.111098 CTGATAAACGTACGCTGGTACC 58.889 50.000 16.72 4.43 45.01 3.34
1925 1979 1.811860 GTACGCTGGTACCCACGAT 59.188 57.895 25.32 14.24 42.61 3.73
1945 1999 7.306807 CCACGATCGATATATGCATGTAAATCC 60.307 40.741 24.34 0.00 0.00 3.01
2011 2068 7.171508 AGAGGAAACATATATACATGTGTTGCG 59.828 37.037 9.11 0.00 43.34 4.85
2012 2069 6.765989 AGGAAACATATATACATGTGTTGCGT 59.234 34.615 9.11 0.31 43.34 5.24
2013 2070 7.929245 AGGAAACATATATACATGTGTTGCGTA 59.071 33.333 9.11 0.00 43.34 4.42
2076 2133 1.679640 CCTGTATGGCTGTGATGTGCA 60.680 52.381 0.00 0.00 0.00 4.57
2082 2143 0.734889 GGCTGTGATGTGCATGTACC 59.265 55.000 11.66 0.00 0.00 3.34
2096 2157 2.038863 TGTACCTGGGTCCATGACTT 57.961 50.000 0.00 0.00 32.47 3.01
2137 2198 6.096673 TCTTACTAGCAAACATGTCTGTCA 57.903 37.500 0.00 0.00 33.36 3.58
2140 2201 4.310769 ACTAGCAAACATGTCTGTCAGTC 58.689 43.478 0.00 0.00 33.36 3.51
2148 2209 2.103537 TGTCTGTCAGTCGTATCGGA 57.896 50.000 0.00 0.00 0.00 4.55
2150 2211 2.815503 TGTCTGTCAGTCGTATCGGAAA 59.184 45.455 0.00 0.00 0.00 3.13
2213 2274 5.731678 AGTTCAATACCCTCCTTCCAATAGT 59.268 40.000 0.00 0.00 0.00 2.12
2220 2281 6.253946 ACCCTCCTTCCAATAGTTTCATAG 57.746 41.667 0.00 0.00 0.00 2.23
2300 2362 4.560128 CCGACTATGACCAAGGTATCATG 58.440 47.826 4.24 0.00 36.26 3.07
2384 2446 1.600957 CATTGAACCGAGCTGGCATAG 59.399 52.381 0.00 0.00 43.94 2.23
2397 2459 5.068636 AGCTGGCATAGGAGAATGTTTATG 58.931 41.667 0.00 0.00 0.00 1.90
2398 2460 4.217118 GCTGGCATAGGAGAATGTTTATGG 59.783 45.833 0.00 0.00 0.00 2.74
2399 2461 5.624159 CTGGCATAGGAGAATGTTTATGGA 58.376 41.667 0.00 0.00 0.00 3.41
2400 2462 5.376625 TGGCATAGGAGAATGTTTATGGAC 58.623 41.667 0.00 0.00 0.00 4.02
2401 2463 5.132648 TGGCATAGGAGAATGTTTATGGACT 59.867 40.000 0.00 0.00 0.00 3.85
2402 2464 5.703130 GGCATAGGAGAATGTTTATGGACTC 59.297 44.000 0.00 0.00 0.00 3.36
2403 2465 5.406780 GCATAGGAGAATGTTTATGGACTCG 59.593 44.000 0.00 0.00 0.00 4.18
2404 2466 6.738731 GCATAGGAGAATGTTTATGGACTCGA 60.739 42.308 0.00 0.00 0.00 4.04
2405 2467 5.677319 AGGAGAATGTTTATGGACTCGAA 57.323 39.130 0.00 0.00 0.00 3.71
2406 2468 5.665459 AGGAGAATGTTTATGGACTCGAAG 58.335 41.667 0.00 0.00 0.00 3.79
2407 2469 4.271291 GGAGAATGTTTATGGACTCGAAGC 59.729 45.833 0.00 0.00 0.00 3.86
2408 2470 5.091261 AGAATGTTTATGGACTCGAAGCT 57.909 39.130 0.00 0.00 0.00 3.74
2409 2471 5.491982 AGAATGTTTATGGACTCGAAGCTT 58.508 37.500 0.00 0.00 0.00 3.74
2410 2472 5.582665 AGAATGTTTATGGACTCGAAGCTTC 59.417 40.000 16.84 16.84 0.00 3.86
2411 2473 3.596214 TGTTTATGGACTCGAAGCTTCC 58.404 45.455 20.62 7.69 0.00 3.46
2412 2474 2.937149 GTTTATGGACTCGAAGCTTCCC 59.063 50.000 20.62 15.55 0.00 3.97
2413 2475 1.120530 TATGGACTCGAAGCTTCCCC 58.879 55.000 20.62 15.76 0.00 4.81
2414 2476 0.618968 ATGGACTCGAAGCTTCCCCT 60.619 55.000 20.62 6.20 0.00 4.79
2415 2477 1.258445 TGGACTCGAAGCTTCCCCTC 61.258 60.000 20.62 11.34 0.00 4.30
2416 2478 1.518302 GACTCGAAGCTTCCCCTCC 59.482 63.158 20.62 3.13 0.00 4.30
2417 2479 1.962321 GACTCGAAGCTTCCCCTCCC 61.962 65.000 20.62 2.10 0.00 4.30
2418 2480 2.687566 TCGAAGCTTCCCCTCCCC 60.688 66.667 20.62 0.00 0.00 4.81
2419 2481 2.689034 CGAAGCTTCCCCTCCCCT 60.689 66.667 20.62 0.00 0.00 4.79
2420 2482 2.736826 CGAAGCTTCCCCTCCCCTC 61.737 68.421 20.62 0.00 0.00 4.30
2421 2483 2.286502 AAGCTTCCCCTCCCCTCC 60.287 66.667 0.00 0.00 0.00 4.30
2422 2484 3.972328 AAGCTTCCCCTCCCCTCCC 62.972 68.421 0.00 0.00 0.00 4.30
2423 2485 4.439901 GCTTCCCCTCCCCTCCCT 62.440 72.222 0.00 0.00 0.00 4.20
2424 2486 2.040359 CTTCCCCTCCCCTCCCTC 60.040 72.222 0.00 0.00 0.00 4.30
2425 2487 3.707189 TTCCCCTCCCCTCCCTCC 61.707 72.222 0.00 0.00 0.00 4.30
2467 2529 3.169242 GGAGGGTTCCCGATCCCC 61.169 72.222 7.15 0.00 44.40 4.81
2468 2530 3.547513 GAGGGTTCCCGATCCCCG 61.548 72.222 7.15 0.00 44.40 5.73
2494 2556 4.825679 CCCCCACCTCCTCCCTCC 62.826 77.778 0.00 0.00 0.00 4.30
2495 2557 3.700350 CCCCACCTCCTCCCTCCT 61.700 72.222 0.00 0.00 0.00 3.69
2496 2558 2.041405 CCCACCTCCTCCCTCCTC 60.041 72.222 0.00 0.00 0.00 3.71
2497 2559 2.041405 CCACCTCCTCCCTCCTCC 60.041 72.222 0.00 0.00 0.00 4.30
2498 2560 2.780693 CACCTCCTCCCTCCTCCA 59.219 66.667 0.00 0.00 0.00 3.86
2499 2561 1.687493 CACCTCCTCCCTCCTCCAC 60.687 68.421 0.00 0.00 0.00 4.02
2500 2562 2.041405 CCTCCTCCCTCCTCCACC 60.041 72.222 0.00 0.00 0.00 4.61
2501 2563 2.443016 CTCCTCCCTCCTCCACCG 60.443 72.222 0.00 0.00 0.00 4.94
2502 2564 3.273654 TCCTCCCTCCTCCACCGT 61.274 66.667 0.00 0.00 0.00 4.83
2503 2565 2.760385 CCTCCCTCCTCCACCGTC 60.760 72.222 0.00 0.00 0.00 4.79
2504 2566 3.141488 CTCCCTCCTCCACCGTCG 61.141 72.222 0.00 0.00 0.00 5.12
2539 2601 2.901042 GAAGCGGGGATCCTTCGT 59.099 61.111 22.20 9.36 0.00 3.85
2540 2602 1.227292 GAAGCGGGGATCCTTCGTC 60.227 63.158 22.20 16.42 0.00 4.20
2541 2603 2.646117 GAAGCGGGGATCCTTCGTCC 62.646 65.000 22.20 10.85 34.92 4.79
2546 2608 4.237207 GGATCCTTCGTCCCCCGC 62.237 72.222 3.84 0.00 36.19 6.13
2547 2609 3.467226 GATCCTTCGTCCCCCGCA 61.467 66.667 0.00 0.00 36.19 5.69
2548 2610 3.735037 GATCCTTCGTCCCCCGCAC 62.735 68.421 0.00 0.00 36.19 5.34
2550 2612 4.016706 CCTTCGTCCCCCGCACTT 62.017 66.667 0.00 0.00 36.19 3.16
2551 2613 2.742372 CTTCGTCCCCCGCACTTG 60.742 66.667 0.00 0.00 36.19 3.16
2552 2614 4.323477 TTCGTCCCCCGCACTTGG 62.323 66.667 0.00 0.00 36.19 3.61
2559 2621 2.124320 CCCGCACTTGGGGTATGG 60.124 66.667 11.11 0.00 46.17 2.74
2560 2622 2.828549 CCGCACTTGGGGTATGGC 60.829 66.667 4.15 0.00 42.54 4.40
2561 2623 2.045438 CGCACTTGGGGTATGGCA 60.045 61.111 0.00 0.00 0.00 4.92
2562 2624 2.406616 CGCACTTGGGGTATGGCAC 61.407 63.158 0.00 0.00 0.00 5.01
2563 2625 2.406616 GCACTTGGGGTATGGCACG 61.407 63.158 0.00 0.00 0.00 5.34
2564 2626 1.748879 CACTTGGGGTATGGCACGG 60.749 63.158 0.00 0.00 0.00 4.94
2565 2627 2.124320 CTTGGGGTATGGCACGGG 60.124 66.667 0.00 0.00 0.00 5.28
2566 2628 4.434354 TTGGGGTATGGCACGGGC 62.434 66.667 0.00 0.00 40.13 6.13
2576 2638 4.148825 GCACGGGCCAGATCTCGT 62.149 66.667 10.86 2.69 36.19 4.18
2577 2639 2.202797 CACGGGCCAGATCTCGTG 60.203 66.667 17.07 17.07 44.98 4.35
2578 2640 3.461773 ACGGGCCAGATCTCGTGG 61.462 66.667 10.86 0.94 38.21 4.94
2583 2645 2.503061 CCAGATCTCGTGGCTGGG 59.497 66.667 15.22 0.00 44.24 4.45
2584 2646 2.060383 CCAGATCTCGTGGCTGGGA 61.060 63.158 15.22 0.00 44.24 4.37
2585 2647 1.440893 CAGATCTCGTGGCTGGGAG 59.559 63.158 0.00 0.00 0.00 4.30
2586 2648 1.039785 CAGATCTCGTGGCTGGGAGA 61.040 60.000 0.00 5.46 42.96 3.71
2587 2649 0.754957 AGATCTCGTGGCTGGGAGAG 60.755 60.000 0.00 0.59 42.15 3.20
2588 2650 1.743321 GATCTCGTGGCTGGGAGAGG 61.743 65.000 8.29 0.00 42.15 3.69
2596 2658 3.222855 CTGGGAGAGGCGCTCGAT 61.223 66.667 12.17 0.00 44.91 3.59
2597 2659 3.496875 CTGGGAGAGGCGCTCGATG 62.497 68.421 12.17 0.86 44.91 3.84
2598 2660 4.959596 GGGAGAGGCGCTCGATGC 62.960 72.222 12.17 1.37 44.91 3.91
2642 2704 3.891400 CCGGCGATGGTGGCATTG 61.891 66.667 9.30 0.00 0.00 2.82
2643 2705 3.891400 CGGCGATGGTGGCATTGG 61.891 66.667 0.00 0.00 0.00 3.16
2644 2706 2.440065 GGCGATGGTGGCATTGGA 60.440 61.111 0.00 0.00 0.00 3.53
2645 2707 2.774799 GGCGATGGTGGCATTGGAC 61.775 63.158 0.00 0.00 0.00 4.02
2646 2708 3.101209 CGATGGTGGCATTGGACG 58.899 61.111 0.00 0.00 0.00 4.79
2647 2709 2.472059 CGATGGTGGCATTGGACGG 61.472 63.158 0.00 0.00 0.00 4.79
2648 2710 2.044053 ATGGTGGCATTGGACGGG 60.044 61.111 0.00 0.00 0.00 5.28
2654 2716 3.499737 GCATTGGACGGGCGACAG 61.500 66.667 0.00 0.00 0.00 3.51
2655 2717 2.819595 CATTGGACGGGCGACAGG 60.820 66.667 0.00 0.00 0.00 4.00
2656 2718 4.778143 ATTGGACGGGCGACAGGC 62.778 66.667 0.00 0.00 42.96 4.85
2667 2729 4.760047 GACAGGCGGCATGGTCGT 62.760 66.667 19.53 0.00 31.29 4.34
2672 2734 3.799755 GCGGCATGGTCGTGGTTC 61.800 66.667 0.00 0.00 31.29 3.62
2673 2735 3.487202 CGGCATGGTCGTGGTTCG 61.487 66.667 0.00 0.00 41.41 3.95
2674 2736 3.124921 GGCATGGTCGTGGTTCGG 61.125 66.667 0.00 0.00 40.32 4.30
2675 2737 3.124921 GCATGGTCGTGGTTCGGG 61.125 66.667 0.00 0.00 40.32 5.14
2676 2738 2.345991 CATGGTCGTGGTTCGGGT 59.654 61.111 0.00 0.00 40.32 5.28
2677 2739 1.302192 CATGGTCGTGGTTCGGGTT 60.302 57.895 0.00 0.00 40.32 4.11
2678 2740 1.302192 ATGGTCGTGGTTCGGGTTG 60.302 57.895 0.00 0.00 40.32 3.77
2679 2741 2.667199 GGTCGTGGTTCGGGTTGG 60.667 66.667 0.00 0.00 40.32 3.77
2680 2742 2.109593 GTCGTGGTTCGGGTTGGT 59.890 61.111 0.00 0.00 40.32 3.67
2681 2743 2.109387 TCGTGGTTCGGGTTGGTG 59.891 61.111 0.00 0.00 40.32 4.17
2682 2744 2.975799 CGTGGTTCGGGTTGGTGG 60.976 66.667 0.00 0.00 35.71 4.61
2683 2745 2.193786 GTGGTTCGGGTTGGTGGT 59.806 61.111 0.00 0.00 0.00 4.16
2684 2746 2.190841 GTGGTTCGGGTTGGTGGTG 61.191 63.158 0.00 0.00 0.00 4.17
2685 2747 2.596338 GGTTCGGGTTGGTGGTGG 60.596 66.667 0.00 0.00 0.00 4.61
2686 2748 3.292159 GTTCGGGTTGGTGGTGGC 61.292 66.667 0.00 0.00 0.00 5.01
2687 2749 4.939368 TTCGGGTTGGTGGTGGCG 62.939 66.667 0.00 0.00 0.00 5.69
2721 2783 4.364817 CCGTTGGGAAACGTAGCA 57.635 55.556 9.81 0.00 44.04 3.49
2722 2784 2.849081 CCGTTGGGAAACGTAGCAT 58.151 52.632 9.81 0.00 44.04 3.79
2723 2785 0.446222 CCGTTGGGAAACGTAGCATG 59.554 55.000 9.81 0.00 44.04 4.06
2724 2786 0.446222 CGTTGGGAAACGTAGCATGG 59.554 55.000 2.95 0.00 40.94 3.66
2725 2787 1.816074 GTTGGGAAACGTAGCATGGA 58.184 50.000 0.00 0.00 0.00 3.41
2726 2788 2.156098 GTTGGGAAACGTAGCATGGAA 58.844 47.619 0.00 0.00 0.00 3.53
2727 2789 2.752903 GTTGGGAAACGTAGCATGGAAT 59.247 45.455 0.00 0.00 0.00 3.01
2728 2790 3.080300 TGGGAAACGTAGCATGGAATT 57.920 42.857 0.00 0.00 0.00 2.17
2729 2791 3.426615 TGGGAAACGTAGCATGGAATTT 58.573 40.909 0.00 0.00 0.00 1.82
2730 2792 3.442273 TGGGAAACGTAGCATGGAATTTC 59.558 43.478 0.00 0.00 0.00 2.17
2731 2793 3.442273 GGGAAACGTAGCATGGAATTTCA 59.558 43.478 0.00 0.00 0.00 2.69
2732 2794 4.082463 GGGAAACGTAGCATGGAATTTCAA 60.082 41.667 0.00 0.00 0.00 2.69
2733 2795 5.465935 GGAAACGTAGCATGGAATTTCAAA 58.534 37.500 0.00 0.00 0.00 2.69
2734 2796 5.923684 GGAAACGTAGCATGGAATTTCAAAA 59.076 36.000 0.00 0.00 0.00 2.44
2735 2797 6.422400 GGAAACGTAGCATGGAATTTCAAAAA 59.578 34.615 0.00 0.00 0.00 1.94
2759 2821 6.986904 AAATTCCTATTCTCACGAAAGACC 57.013 37.500 0.00 0.00 31.91 3.85
2760 2822 5.941555 ATTCCTATTCTCACGAAAGACCT 57.058 39.130 0.00 0.00 31.91 3.85
2761 2823 7.419711 AATTCCTATTCTCACGAAAGACCTA 57.580 36.000 0.00 0.00 31.91 3.08
2762 2824 7.604657 ATTCCTATTCTCACGAAAGACCTAT 57.395 36.000 0.00 0.00 31.91 2.57
2763 2825 6.636562 TCCTATTCTCACGAAAGACCTATC 57.363 41.667 0.00 0.00 31.91 2.08
2764 2826 6.366340 TCCTATTCTCACGAAAGACCTATCT 58.634 40.000 0.00 0.00 36.42 1.98
2765 2827 7.515586 TCCTATTCTCACGAAAGACCTATCTA 58.484 38.462 0.00 0.00 33.57 1.98
2766 2828 7.662258 TCCTATTCTCACGAAAGACCTATCTAG 59.338 40.741 0.00 0.00 33.57 2.43
2767 2829 6.642707 ATTCTCACGAAAGACCTATCTAGG 57.357 41.667 1.57 1.57 39.92 3.02
2768 2830 5.369409 TCTCACGAAAGACCTATCTAGGA 57.631 43.478 10.25 0.00 46.63 2.94
2769 2831 5.369833 TCTCACGAAAGACCTATCTAGGAG 58.630 45.833 10.25 0.00 46.63 3.69
2770 2832 5.130643 TCTCACGAAAGACCTATCTAGGAGA 59.869 44.000 10.25 0.00 46.63 3.71
2771 2833 5.942961 TCACGAAAGACCTATCTAGGAGAT 58.057 41.667 10.25 0.00 46.63 2.75
2772 2834 5.765677 TCACGAAAGACCTATCTAGGAGATG 59.234 44.000 10.25 0.00 46.63 2.90
2773 2835 4.521256 ACGAAAGACCTATCTAGGAGATGC 59.479 45.833 10.25 0.00 46.63 3.91
2774 2836 4.520874 CGAAAGACCTATCTAGGAGATGCA 59.479 45.833 10.25 0.00 46.63 3.96
2775 2837 5.184864 CGAAAGACCTATCTAGGAGATGCAT 59.815 44.000 10.25 0.00 46.63 3.96
2776 2838 6.375736 CGAAAGACCTATCTAGGAGATGCATA 59.624 42.308 10.25 0.00 46.63 3.14
2777 2839 7.415095 CGAAAGACCTATCTAGGAGATGCATAG 60.415 44.444 10.25 0.00 46.63 2.23
2778 2840 5.200483 AGACCTATCTAGGAGATGCATAGC 58.800 45.833 10.25 0.00 46.63 2.97
2779 2841 4.940483 ACCTATCTAGGAGATGCATAGCA 58.060 43.478 10.25 0.00 46.63 3.49
2780 2842 5.336945 ACCTATCTAGGAGATGCATAGCAA 58.663 41.667 10.25 0.00 46.63 3.91
2781 2843 5.186797 ACCTATCTAGGAGATGCATAGCAAC 59.813 44.000 10.25 0.00 46.63 4.17
2782 2844 3.650070 TCTAGGAGATGCATAGCAACG 57.350 47.619 0.00 0.00 43.62 4.10
2783 2845 3.222603 TCTAGGAGATGCATAGCAACGA 58.777 45.455 0.00 0.00 43.62 3.85
2784 2846 2.522836 AGGAGATGCATAGCAACGAG 57.477 50.000 0.00 0.00 43.62 4.18
2785 2847 2.034878 AGGAGATGCATAGCAACGAGA 58.965 47.619 0.00 0.00 43.62 4.04
2786 2848 2.035704 AGGAGATGCATAGCAACGAGAG 59.964 50.000 0.00 0.00 43.62 3.20
2787 2849 2.402305 GAGATGCATAGCAACGAGAGG 58.598 52.381 0.00 0.00 43.62 3.69
2788 2850 1.069823 AGATGCATAGCAACGAGAGGG 59.930 52.381 0.00 0.00 43.62 4.30
2789 2851 0.107456 ATGCATAGCAACGAGAGGGG 59.893 55.000 0.00 0.00 43.62 4.79
2790 2852 1.227674 GCATAGCAACGAGAGGGGG 60.228 63.158 0.00 0.00 0.00 5.40
2791 2853 1.686325 GCATAGCAACGAGAGGGGGA 61.686 60.000 0.00 0.00 0.00 4.81
2792 2854 0.390860 CATAGCAACGAGAGGGGGAG 59.609 60.000 0.00 0.00 0.00 4.30
2793 2855 0.261991 ATAGCAACGAGAGGGGGAGA 59.738 55.000 0.00 0.00 0.00 3.71
2794 2856 0.395862 TAGCAACGAGAGGGGGAGAG 60.396 60.000 0.00 0.00 0.00 3.20
2795 2857 1.985116 GCAACGAGAGGGGGAGAGT 60.985 63.158 0.00 0.00 0.00 3.24
2796 2858 1.893786 CAACGAGAGGGGGAGAGTG 59.106 63.158 0.00 0.00 0.00 3.51
2797 2859 0.900647 CAACGAGAGGGGGAGAGTGT 60.901 60.000 0.00 0.00 0.00 3.55
2798 2860 0.900647 AACGAGAGGGGGAGAGTGTG 60.901 60.000 0.00 0.00 0.00 3.82
2799 2861 1.304547 CGAGAGGGGGAGAGTGTGT 60.305 63.158 0.00 0.00 0.00 3.72
2800 2862 1.316706 CGAGAGGGGGAGAGTGTGTC 61.317 65.000 0.00 0.00 0.00 3.67
2801 2863 0.040499 GAGAGGGGGAGAGTGTGTCT 59.960 60.000 0.00 0.00 38.71 3.41
2802 2864 1.285373 GAGAGGGGGAGAGTGTGTCTA 59.715 57.143 0.00 0.00 34.71 2.59
2803 2865 1.006162 AGAGGGGGAGAGTGTGTCTAC 59.994 57.143 0.00 0.00 34.71 2.59
2804 2866 0.323542 AGGGGGAGAGTGTGTCTACG 60.324 60.000 0.00 0.00 36.91 3.51
2805 2867 0.611340 GGGGGAGAGTGTGTCTACGT 60.611 60.000 0.00 0.00 36.91 3.57
2806 2868 1.340405 GGGGGAGAGTGTGTCTACGTA 60.340 57.143 0.00 0.00 36.91 3.57
2807 2869 1.742268 GGGGAGAGTGTGTCTACGTAC 59.258 57.143 0.00 0.00 36.91 3.67
2808 2870 1.742268 GGGAGAGTGTGTCTACGTACC 59.258 57.143 0.00 0.00 36.91 3.34
2809 2871 1.742268 GGAGAGTGTGTCTACGTACCC 59.258 57.143 0.00 0.00 34.71 3.69
2810 2872 2.617532 GGAGAGTGTGTCTACGTACCCT 60.618 54.545 0.00 0.00 34.71 4.34
2811 2873 2.677337 GAGAGTGTGTCTACGTACCCTC 59.323 54.545 0.00 0.00 34.71 4.30
2812 2874 1.396301 GAGTGTGTCTACGTACCCTCG 59.604 57.143 0.00 0.00 0.00 4.63
2813 2875 1.160137 GTGTGTCTACGTACCCTCGT 58.840 55.000 0.00 0.00 45.97 4.18
2814 2876 2.028112 AGTGTGTCTACGTACCCTCGTA 60.028 50.000 0.00 0.00 43.80 3.43
2819 2881 3.362581 TACGTACCCTCGTAGACCG 57.637 57.895 0.00 0.00 43.80 4.79
2820 2882 0.821517 TACGTACCCTCGTAGACCGA 59.178 55.000 0.00 0.00 45.00 4.69
2821 2883 0.036388 ACGTACCCTCGTAGACCGAA 60.036 55.000 0.00 0.00 46.75 4.30
2822 2884 1.086696 CGTACCCTCGTAGACCGAAA 58.913 55.000 0.00 0.00 46.75 3.46
2823 2885 1.063174 CGTACCCTCGTAGACCGAAAG 59.937 57.143 0.00 0.00 46.75 2.62
2824 2886 1.098050 TACCCTCGTAGACCGAAAGC 58.902 55.000 0.00 0.00 46.75 3.51
2825 2887 1.226603 CCCTCGTAGACCGAAAGCG 60.227 63.158 0.00 0.00 46.75 4.68
2843 2905 2.772568 CGGAAGCATTTGACAACACA 57.227 45.000 0.00 0.00 0.00 3.72
2844 2906 2.653890 CGGAAGCATTTGACAACACAG 58.346 47.619 0.00 0.00 0.00 3.66
2845 2907 2.033299 CGGAAGCATTTGACAACACAGT 59.967 45.455 0.00 0.00 0.00 3.55
2846 2908 3.489059 CGGAAGCATTTGACAACACAGTT 60.489 43.478 0.00 0.00 0.00 3.16
2847 2909 3.798337 GGAAGCATTTGACAACACAGTTG 59.202 43.478 8.24 8.24 0.00 3.16
2848 2910 4.439974 GGAAGCATTTGACAACACAGTTGA 60.440 41.667 15.99 0.00 0.00 3.18
2849 2911 4.924305 AGCATTTGACAACACAGTTGAT 57.076 36.364 15.99 1.48 0.00 2.57
2850 2912 4.613944 AGCATTTGACAACACAGTTGATG 58.386 39.130 15.99 9.99 0.00 3.07
2851 2913 4.098349 AGCATTTGACAACACAGTTGATGT 59.902 37.500 15.99 0.00 45.43 3.06
2852 2914 5.299028 AGCATTTGACAACACAGTTGATGTA 59.701 36.000 15.99 0.69 41.41 2.29
2853 2915 5.626543 GCATTTGACAACACAGTTGATGTAG 59.373 40.000 15.99 3.61 41.41 2.74
2854 2916 6.728200 CATTTGACAACACAGTTGATGTAGT 58.272 36.000 15.99 0.00 41.41 2.73
2855 2917 5.984233 TTGACAACACAGTTGATGTAGTC 57.016 39.130 15.99 3.50 41.41 2.59
2856 2918 5.017294 TGACAACACAGTTGATGTAGTCA 57.983 39.130 15.99 5.85 41.41 3.41
2857 2919 5.423886 TGACAACACAGTTGATGTAGTCAA 58.576 37.500 15.99 0.00 44.36 3.18
2869 2931 6.085555 TGATGTAGTCAAACTTCTTCTCGT 57.914 37.500 0.00 0.00 32.78 4.18
2870 2932 6.513180 TGATGTAGTCAAACTTCTTCTCGTT 58.487 36.000 0.00 0.00 32.78 3.85
2871 2933 6.641314 TGATGTAGTCAAACTTCTTCTCGTTC 59.359 38.462 0.00 0.00 32.78 3.95
2872 2934 5.287226 TGTAGTCAAACTTCTTCTCGTTCC 58.713 41.667 0.00 0.00 0.00 3.62
2873 2935 3.381949 AGTCAAACTTCTTCTCGTTCCG 58.618 45.455 0.00 0.00 0.00 4.30
2874 2936 3.067742 AGTCAAACTTCTTCTCGTTCCGA 59.932 43.478 0.00 0.00 0.00 4.55
2875 2937 3.181973 GTCAAACTTCTTCTCGTTCCGAC 59.818 47.826 0.00 0.00 0.00 4.79
2876 2938 2.435533 AACTTCTTCTCGTTCCGACC 57.564 50.000 0.00 0.00 0.00 4.79
2877 2939 0.240411 ACTTCTTCTCGTTCCGACCG 59.760 55.000 0.00 0.00 0.00 4.79
2878 2940 0.520404 CTTCTTCTCGTTCCGACCGA 59.480 55.000 0.00 0.00 0.00 4.69
2879 2941 1.132643 CTTCTTCTCGTTCCGACCGAT 59.867 52.381 0.00 0.00 33.27 4.18
2880 2942 0.731417 TCTTCTCGTTCCGACCGATC 59.269 55.000 0.00 0.00 33.27 3.69
2881 2943 0.450583 CTTCTCGTTCCGACCGATCA 59.549 55.000 0.00 0.00 33.27 2.92
2882 2944 0.883153 TTCTCGTTCCGACCGATCAA 59.117 50.000 0.00 0.00 33.27 2.57
2883 2945 0.450583 TCTCGTTCCGACCGATCAAG 59.549 55.000 0.00 0.00 33.27 3.02
2884 2946 0.170561 CTCGTTCCGACCGATCAAGT 59.829 55.000 0.00 0.00 33.27 3.16
2885 2947 1.399440 CTCGTTCCGACCGATCAAGTA 59.601 52.381 0.00 0.00 33.27 2.24
2886 2948 1.131126 TCGTTCCGACCGATCAAGTAC 59.869 52.381 0.00 0.00 0.00 2.73
2887 2949 1.796617 CGTTCCGACCGATCAAGTACC 60.797 57.143 0.00 0.00 0.00 3.34
2888 2950 0.452987 TTCCGACCGATCAAGTACCG 59.547 55.000 0.00 0.00 0.00 4.02
2889 2951 0.392863 TCCGACCGATCAAGTACCGA 60.393 55.000 0.00 0.00 0.00 4.69
2890 2952 0.452987 CCGACCGATCAAGTACCGAA 59.547 55.000 0.00 0.00 0.00 4.30
2891 2953 1.542544 CGACCGATCAAGTACCGAAC 58.457 55.000 0.00 0.00 0.00 3.95
2892 2954 1.542544 GACCGATCAAGTACCGAACG 58.457 55.000 5.81 5.81 0.00 3.95
2893 2955 0.883833 ACCGATCAAGTACCGAACGT 59.116 50.000 10.35 0.00 0.00 3.99
2894 2956 2.083774 ACCGATCAAGTACCGAACGTA 58.916 47.619 10.35 0.00 0.00 3.57
2895 2957 2.159517 ACCGATCAAGTACCGAACGTAC 60.160 50.000 10.35 0.00 46.69 3.67
2902 2964 2.422276 GTACCGAACGTACAACACCT 57.578 50.000 0.00 0.00 45.78 4.00
2903 2965 2.319472 GTACCGAACGTACAACACCTC 58.681 52.381 0.00 0.00 45.78 3.85
2904 2966 0.032540 ACCGAACGTACAACACCTCC 59.967 55.000 0.00 0.00 0.00 4.30
2905 2967 1.005294 CCGAACGTACAACACCTCCG 61.005 60.000 0.00 0.00 0.00 4.63
2906 2968 0.040157 CGAACGTACAACACCTCCGA 60.040 55.000 0.00 0.00 0.00 4.55
2907 2969 1.694639 GAACGTACAACACCTCCGAG 58.305 55.000 0.00 0.00 0.00 4.63
2908 2970 1.000938 GAACGTACAACACCTCCGAGT 60.001 52.381 0.00 0.00 0.00 4.18
2909 2971 1.035139 ACGTACAACACCTCCGAGTT 58.965 50.000 0.00 0.00 0.00 3.01
2910 2972 1.410153 ACGTACAACACCTCCGAGTTT 59.590 47.619 0.00 0.00 0.00 2.66
2911 2973 2.159057 ACGTACAACACCTCCGAGTTTT 60.159 45.455 0.00 0.00 0.00 2.43
2912 2974 2.220133 CGTACAACACCTCCGAGTTTTG 59.780 50.000 0.00 0.00 34.36 2.44
2913 2975 1.021968 ACAACACCTCCGAGTTTTGC 58.978 50.000 0.00 0.00 31.94 3.68
2914 2976 1.021202 CAACACCTCCGAGTTTTGCA 58.979 50.000 0.00 0.00 0.00 4.08
2915 2977 1.021968 AACACCTCCGAGTTTTGCAC 58.978 50.000 0.00 0.00 0.00 4.57
2916 2978 0.107410 ACACCTCCGAGTTTTGCACA 60.107 50.000 0.00 0.00 0.00 4.57
2917 2979 0.307760 CACCTCCGAGTTTTGCACAC 59.692 55.000 0.00 0.00 0.00 3.82
2918 2980 1.157870 ACCTCCGAGTTTTGCACACG 61.158 55.000 0.00 0.00 39.03 4.49
2919 2981 1.157870 CCTCCGAGTTTTGCACACGT 61.158 55.000 0.00 0.00 37.75 4.49
2920 2982 0.655733 CTCCGAGTTTTGCACACGTT 59.344 50.000 0.00 0.00 37.75 3.99
2921 2983 0.653636 TCCGAGTTTTGCACACGTTC 59.346 50.000 0.00 0.00 37.75 3.95
2922 2984 0.375454 CCGAGTTTTGCACACGTTCA 59.625 50.000 0.00 0.00 37.75 3.18
2923 2985 1.594518 CCGAGTTTTGCACACGTTCAG 60.595 52.381 0.00 0.00 37.75 3.02
2924 2986 1.466855 GAGTTTTGCACACGTTCAGC 58.533 50.000 0.00 0.00 0.00 4.26
2925 2987 1.064060 GAGTTTTGCACACGTTCAGCT 59.936 47.619 5.40 0.00 0.00 4.24
2926 2988 1.064060 AGTTTTGCACACGTTCAGCTC 59.936 47.619 5.40 0.00 0.00 4.09
2927 2989 0.027455 TTTTGCACACGTTCAGCTCG 59.973 50.000 5.40 0.00 0.00 5.03
2928 2990 0.808060 TTTGCACACGTTCAGCTCGA 60.808 50.000 0.00 0.00 0.00 4.04
2929 2991 0.599991 TTGCACACGTTCAGCTCGAT 60.600 50.000 0.00 0.00 0.00 3.59
2930 2992 1.284297 TGCACACGTTCAGCTCGATG 61.284 55.000 0.00 0.07 0.00 3.84
2931 2993 1.008875 GCACACGTTCAGCTCGATGA 61.009 55.000 0.00 0.00 0.00 2.92
2932 2994 0.710567 CACACGTTCAGCTCGATGAC 59.289 55.000 0.00 0.00 0.00 3.06
2933 2995 0.729478 ACACGTTCAGCTCGATGACG 60.729 55.000 0.00 4.93 41.26 4.35
2934 2996 0.729478 CACGTTCAGCTCGATGACGT 60.729 55.000 0.00 5.49 37.39 4.34
2935 2997 0.454620 ACGTTCAGCTCGATGACGTC 60.455 55.000 9.11 9.11 40.69 4.34
2936 2998 1.134530 CGTTCAGCTCGATGACGTCC 61.135 60.000 14.12 0.00 40.69 4.79
2937 2999 0.802607 GTTCAGCTCGATGACGTCCC 60.803 60.000 14.12 3.95 40.69 4.46
2938 3000 0.965866 TTCAGCTCGATGACGTCCCT 60.966 55.000 14.12 0.00 40.69 4.20
2939 3001 1.064946 CAGCTCGATGACGTCCCTC 59.935 63.158 14.12 9.05 40.69 4.30
2940 3002 2.024871 GCTCGATGACGTCCCTCG 59.975 66.667 23.88 23.88 46.00 4.63
2941 3003 2.470362 GCTCGATGACGTCCCTCGA 61.470 63.158 27.81 27.81 42.86 4.04
2942 3004 1.989966 GCTCGATGACGTCCCTCGAA 61.990 60.000 28.71 18.23 40.52 3.71
2943 3005 0.450583 CTCGATGACGTCCCTCGAAA 59.549 55.000 28.71 15.73 40.52 3.46
2944 3006 1.065701 CTCGATGACGTCCCTCGAAAT 59.934 52.381 28.71 10.91 40.52 2.17
2945 3007 1.065102 TCGATGACGTCCCTCGAAATC 59.935 52.381 27.70 15.67 42.86 2.17
2946 3008 1.065701 CGATGACGTCCCTCGAAATCT 59.934 52.381 24.99 0.00 42.86 2.40
2947 3009 2.479730 CGATGACGTCCCTCGAAATCTT 60.480 50.000 24.99 0.00 42.86 2.40
2948 3010 2.363788 TGACGTCCCTCGAAATCTTG 57.636 50.000 14.12 0.00 42.86 3.02
2949 3011 1.890489 TGACGTCCCTCGAAATCTTGA 59.110 47.619 14.12 0.00 42.86 3.02
2950 3012 2.496070 TGACGTCCCTCGAAATCTTGAT 59.504 45.455 14.12 0.00 42.86 2.57
2951 3013 3.117046 GACGTCCCTCGAAATCTTGATC 58.883 50.000 3.51 0.00 42.86 2.92
2952 3014 2.159085 ACGTCCCTCGAAATCTTGATCC 60.159 50.000 0.00 0.00 42.86 3.36
2953 3015 2.159099 CGTCCCTCGAAATCTTGATCCA 60.159 50.000 0.00 0.00 42.86 3.41
2954 3016 3.462021 GTCCCTCGAAATCTTGATCCAG 58.538 50.000 0.00 0.00 0.00 3.86
2955 3017 2.158900 TCCCTCGAAATCTTGATCCAGC 60.159 50.000 0.00 0.00 0.00 4.85
2956 3018 2.420547 CCCTCGAAATCTTGATCCAGCA 60.421 50.000 0.00 0.00 0.00 4.41
2957 3019 3.474600 CCTCGAAATCTTGATCCAGCAT 58.525 45.455 0.00 0.00 0.00 3.79
2958 3020 3.881688 CCTCGAAATCTTGATCCAGCATT 59.118 43.478 0.00 0.00 0.00 3.56
2959 3021 4.261072 CCTCGAAATCTTGATCCAGCATTG 60.261 45.833 0.00 0.00 0.00 2.82
2960 3022 4.264253 TCGAAATCTTGATCCAGCATTGT 58.736 39.130 0.00 0.00 0.00 2.71
2961 3023 5.427378 TCGAAATCTTGATCCAGCATTGTA 58.573 37.500 0.00 0.00 0.00 2.41
2962 3024 6.057533 TCGAAATCTTGATCCAGCATTGTAT 58.942 36.000 0.00 0.00 0.00 2.29
2963 3025 6.203530 TCGAAATCTTGATCCAGCATTGTATC 59.796 38.462 0.00 0.00 0.00 2.24
2964 3026 5.936686 AATCTTGATCCAGCATTGTATCG 57.063 39.130 0.00 0.00 0.00 2.92
2965 3027 4.670896 TCTTGATCCAGCATTGTATCGA 57.329 40.909 0.00 0.00 0.00 3.59
2966 3028 4.625028 TCTTGATCCAGCATTGTATCGAG 58.375 43.478 0.00 0.00 33.06 4.04
2967 3029 3.391506 TGATCCAGCATTGTATCGAGG 57.608 47.619 0.00 0.00 0.00 4.63
2968 3030 2.965147 TGATCCAGCATTGTATCGAGGA 59.035 45.455 0.00 0.00 0.00 3.71
2969 3031 3.387699 TGATCCAGCATTGTATCGAGGAA 59.612 43.478 0.00 0.00 0.00 3.36
2970 3032 3.459232 TCCAGCATTGTATCGAGGAAG 57.541 47.619 0.00 0.00 0.00 3.46
2971 3033 2.766263 TCCAGCATTGTATCGAGGAAGT 59.234 45.455 0.00 0.00 0.00 3.01
2972 3034 3.958147 TCCAGCATTGTATCGAGGAAGTA 59.042 43.478 0.00 0.00 0.00 2.24
2973 3035 4.038042 TCCAGCATTGTATCGAGGAAGTAG 59.962 45.833 0.00 0.00 0.00 2.57
2974 3036 4.038042 CCAGCATTGTATCGAGGAAGTAGA 59.962 45.833 0.00 0.00 0.00 2.59
2975 3037 5.279206 CCAGCATTGTATCGAGGAAGTAGAT 60.279 44.000 0.00 0.00 0.00 1.98
2976 3038 5.632764 CAGCATTGTATCGAGGAAGTAGATG 59.367 44.000 0.00 0.00 0.00 2.90
2977 3039 5.536538 AGCATTGTATCGAGGAAGTAGATGA 59.463 40.000 0.00 0.00 0.00 2.92
2978 3040 5.861251 GCATTGTATCGAGGAAGTAGATGAG 59.139 44.000 0.00 0.00 0.00 2.90
2979 3041 6.515862 GCATTGTATCGAGGAAGTAGATGAGT 60.516 42.308 0.00 0.00 0.00 3.41
2980 3042 7.429633 CATTGTATCGAGGAAGTAGATGAGTT 58.570 38.462 0.00 0.00 0.00 3.01
2981 3043 6.621316 TGTATCGAGGAAGTAGATGAGTTC 57.379 41.667 0.00 0.00 36.84 3.01
2987 3049 4.035278 GGAAGTAGATGAGTTCCGTCAG 57.965 50.000 0.00 0.00 45.70 3.51
2988 3050 3.440228 GAAGTAGATGAGTTCCGTCAGC 58.560 50.000 0.00 0.00 32.06 4.26
2989 3051 2.447443 AGTAGATGAGTTCCGTCAGCA 58.553 47.619 0.00 0.00 35.20 4.41
2990 3052 2.164624 AGTAGATGAGTTCCGTCAGCAC 59.835 50.000 0.00 0.00 35.20 4.40
2991 3053 0.109086 AGATGAGTTCCGTCAGCACG 60.109 55.000 0.00 0.00 46.29 5.34
3000 3062 3.490759 GTCAGCACGACGGCATGG 61.491 66.667 10.28 1.29 34.19 3.66
3001 3063 4.002506 TCAGCACGACGGCATGGT 62.003 61.111 10.28 0.00 35.83 3.55
3002 3064 3.792047 CAGCACGACGGCATGGTG 61.792 66.667 0.63 0.63 39.89 4.17
3003 3065 4.002506 AGCACGACGGCATGGTGA 62.003 61.111 0.00 0.00 39.28 4.02
3004 3066 3.788766 GCACGACGGCATGGTGAC 61.789 66.667 0.00 0.00 39.28 3.67
3011 3073 3.501396 GGCATGGTGACGGTGATG 58.499 61.111 0.00 0.00 0.00 3.07
3012 3074 2.114670 GGCATGGTGACGGTGATGG 61.115 63.158 0.00 0.00 0.00 3.51
3013 3075 1.377202 GCATGGTGACGGTGATGGT 60.377 57.895 0.00 0.00 0.00 3.55
3014 3076 1.647545 GCATGGTGACGGTGATGGTG 61.648 60.000 0.00 0.00 0.00 4.17
3015 3077 0.036483 CATGGTGACGGTGATGGTGA 60.036 55.000 0.00 0.00 0.00 4.02
3016 3078 0.690192 ATGGTGACGGTGATGGTGAA 59.310 50.000 0.00 0.00 0.00 3.18
3017 3079 0.034756 TGGTGACGGTGATGGTGAAG 59.965 55.000 0.00 0.00 0.00 3.02
3018 3080 0.034896 GGTGACGGTGATGGTGAAGT 59.965 55.000 0.00 0.00 0.00 3.01
3019 3081 1.148310 GTGACGGTGATGGTGAAGTG 58.852 55.000 0.00 0.00 0.00 3.16
3020 3082 1.044611 TGACGGTGATGGTGAAGTGA 58.955 50.000 0.00 0.00 0.00 3.41
3021 3083 1.623311 TGACGGTGATGGTGAAGTGAT 59.377 47.619 0.00 0.00 0.00 3.06
3022 3084 2.271800 GACGGTGATGGTGAAGTGATC 58.728 52.381 0.00 0.00 0.00 2.92
3023 3085 1.066143 ACGGTGATGGTGAAGTGATCC 60.066 52.381 0.00 0.00 0.00 3.36
3024 3086 1.656652 GGTGATGGTGAAGTGATCCG 58.343 55.000 0.00 0.00 0.00 4.18
3025 3087 1.009829 GTGATGGTGAAGTGATCCGC 58.990 55.000 0.00 0.00 0.00 5.54
3026 3088 0.460109 TGATGGTGAAGTGATCCGCG 60.460 55.000 0.00 0.00 0.00 6.46
3027 3089 1.766143 GATGGTGAAGTGATCCGCGC 61.766 60.000 0.00 0.00 0.00 6.86
3028 3090 2.434185 GGTGAAGTGATCCGCGCA 60.434 61.111 8.75 0.00 0.00 6.09
3029 3091 2.456119 GGTGAAGTGATCCGCGCAG 61.456 63.158 8.75 0.00 0.00 5.18
3030 3092 2.125552 TGAAGTGATCCGCGCAGG 60.126 61.111 8.75 10.32 42.97 4.85
3031 3093 2.892425 GAAGTGATCCGCGCAGGG 60.892 66.667 8.75 0.38 41.52 4.45
3034 3096 4.221422 GTGATCCGCGCAGGGCTA 62.221 66.667 8.75 0.00 41.52 3.93
3035 3097 4.221422 TGATCCGCGCAGGGCTAC 62.221 66.667 8.75 3.63 41.52 3.58
3047 3109 4.110493 GGCTACGCCTAAGCACTG 57.890 61.111 0.00 0.00 46.69 3.66
3048 3110 2.174319 GGCTACGCCTAAGCACTGC 61.174 63.158 0.00 0.00 46.69 4.40
3053 3115 4.598257 GCCTAAGCACTGCGAGAA 57.402 55.556 7.38 0.00 39.53 2.87
3054 3116 3.071580 GCCTAAGCACTGCGAGAAT 57.928 52.632 7.38 0.00 39.53 2.40
3055 3117 2.225068 GCCTAAGCACTGCGAGAATA 57.775 50.000 7.38 0.00 39.53 1.75
3056 3118 2.760374 GCCTAAGCACTGCGAGAATAT 58.240 47.619 7.38 0.00 39.53 1.28
3057 3119 2.478134 GCCTAAGCACTGCGAGAATATG 59.522 50.000 7.38 0.00 39.53 1.78
3058 3120 3.800261 GCCTAAGCACTGCGAGAATATGA 60.800 47.826 7.38 0.00 39.53 2.15
3059 3121 3.738282 CCTAAGCACTGCGAGAATATGAC 59.262 47.826 7.38 0.00 0.00 3.06
3060 3122 2.231215 AGCACTGCGAGAATATGACC 57.769 50.000 0.00 0.00 0.00 4.02
3061 3123 0.855349 GCACTGCGAGAATATGACCG 59.145 55.000 0.00 0.00 0.00 4.79
3062 3124 1.491670 CACTGCGAGAATATGACCGG 58.508 55.000 0.00 0.00 0.00 5.28
3063 3125 0.389391 ACTGCGAGAATATGACCGGG 59.611 55.000 6.32 0.00 0.00 5.73
3064 3126 0.673985 CTGCGAGAATATGACCGGGA 59.326 55.000 6.32 0.00 0.00 5.14
3065 3127 1.273606 CTGCGAGAATATGACCGGGAT 59.726 52.381 6.32 0.00 0.00 3.85
3066 3128 1.000843 TGCGAGAATATGACCGGGATG 59.999 52.381 6.32 0.00 0.00 3.51
3067 3129 1.714794 CGAGAATATGACCGGGATGC 58.285 55.000 6.32 0.00 0.00 3.91
3068 3130 1.000843 CGAGAATATGACCGGGATGCA 59.999 52.381 6.32 0.00 0.00 3.96
3069 3131 2.547855 CGAGAATATGACCGGGATGCAA 60.548 50.000 6.32 0.00 0.00 4.08
3070 3132 3.476552 GAGAATATGACCGGGATGCAAA 58.523 45.455 6.32 0.00 0.00 3.68
3071 3133 3.214328 AGAATATGACCGGGATGCAAAC 58.786 45.455 6.32 0.00 0.00 2.93
3072 3134 3.117888 AGAATATGACCGGGATGCAAACT 60.118 43.478 6.32 0.00 0.00 2.66
3073 3135 4.102524 AGAATATGACCGGGATGCAAACTA 59.897 41.667 6.32 0.00 0.00 2.24
3074 3136 4.640771 ATATGACCGGGATGCAAACTAT 57.359 40.909 6.32 0.00 0.00 2.12
3075 3137 2.036958 TGACCGGGATGCAAACTATG 57.963 50.000 6.32 0.00 0.00 2.23
3076 3138 1.308998 GACCGGGATGCAAACTATGG 58.691 55.000 6.32 0.00 0.00 2.74
3077 3139 0.916086 ACCGGGATGCAAACTATGGA 59.084 50.000 6.32 0.00 0.00 3.41
3078 3140 1.134098 ACCGGGATGCAAACTATGGAG 60.134 52.381 6.32 0.00 30.55 3.86
3079 3141 1.597742 CGGGATGCAAACTATGGAGG 58.402 55.000 0.00 0.00 30.55 4.30
3080 3142 1.815408 CGGGATGCAAACTATGGAGGG 60.815 57.143 0.00 0.00 30.55 4.30
3081 3143 1.494721 GGGATGCAAACTATGGAGGGA 59.505 52.381 0.00 0.00 30.55 4.20
3082 3144 2.487986 GGGATGCAAACTATGGAGGGAG 60.488 54.545 0.00 0.00 30.55 4.30
3083 3145 2.487986 GGATGCAAACTATGGAGGGAGG 60.488 54.545 0.00 0.00 30.55 4.30
3084 3146 0.255890 TGCAAACTATGGAGGGAGGC 59.744 55.000 0.00 0.00 0.00 4.70
3085 3147 0.815615 GCAAACTATGGAGGGAGGCG 60.816 60.000 0.00 0.00 0.00 5.52
3086 3148 0.815615 CAAACTATGGAGGGAGGCGC 60.816 60.000 0.00 0.00 0.00 6.53
3087 3149 1.984288 AAACTATGGAGGGAGGCGCC 61.984 60.000 21.89 21.89 0.00 6.53
3088 3150 3.996124 CTATGGAGGGAGGCGCCG 61.996 72.222 23.20 0.00 37.63 6.46
3105 3167 3.000164 CGCACACGGCTAACAATTG 58.000 52.632 3.24 3.24 41.67 2.32
3106 3168 0.515127 CGCACACGGCTAACAATTGA 59.485 50.000 13.59 0.00 41.67 2.57
3107 3169 1.130373 CGCACACGGCTAACAATTGAT 59.870 47.619 13.59 2.25 41.67 2.57
3108 3170 2.518949 GCACACGGCTAACAATTGATG 58.481 47.619 13.59 2.73 40.25 3.07
3109 3171 2.095263 GCACACGGCTAACAATTGATGT 60.095 45.455 13.59 0.00 41.57 3.06
3110 3172 6.889508 CGCACACGGCTAACAATTGATGTT 62.890 45.833 13.59 0.00 45.12 2.71
3121 3183 4.935702 ACAATTGATGTTGTGTCCTTGTG 58.064 39.130 13.59 0.00 40.06 3.33
3122 3184 4.644234 ACAATTGATGTTGTGTCCTTGTGA 59.356 37.500 13.59 0.00 40.06 3.58
3123 3185 5.217393 CAATTGATGTTGTGTCCTTGTGAG 58.783 41.667 0.00 0.00 0.00 3.51
3124 3186 2.849942 TGATGTTGTGTCCTTGTGAGG 58.150 47.619 0.00 0.00 45.02 3.86
3125 3187 1.537202 GATGTTGTGTCCTTGTGAGGC 59.463 52.381 0.00 0.00 43.21 4.70
3126 3188 0.813610 TGTTGTGTCCTTGTGAGGCG 60.814 55.000 0.00 0.00 43.21 5.52
3127 3189 1.891919 TTGTGTCCTTGTGAGGCGC 60.892 57.895 0.00 0.00 43.21 6.53
3128 3190 3.050275 GTGTCCTTGTGAGGCGCC 61.050 66.667 21.89 21.89 43.21 6.53
3129 3191 4.329545 TGTCCTTGTGAGGCGCCC 62.330 66.667 26.15 15.80 43.21 6.13
3132 3194 4.431131 CCTTGTGAGGCGCCCCAT 62.431 66.667 26.15 3.93 35.94 4.00
3133 3195 2.825836 CTTGTGAGGCGCCCCATC 60.826 66.667 26.15 15.68 0.00 3.51
3134 3196 4.424711 TTGTGAGGCGCCCCATCC 62.425 66.667 26.15 7.30 0.00 3.51
3141 3203 3.884774 GCGCCCCATCCCCACATA 61.885 66.667 0.00 0.00 0.00 2.29
3142 3204 3.170362 CGCCCCATCCCCACATAT 58.830 61.111 0.00 0.00 0.00 1.78
3143 3205 1.847798 GCGCCCCATCCCCACATATA 61.848 60.000 0.00 0.00 0.00 0.86
3144 3206 0.918983 CGCCCCATCCCCACATATAT 59.081 55.000 0.00 0.00 0.00 0.86
3145 3207 2.123589 CGCCCCATCCCCACATATATA 58.876 52.381 0.00 0.00 0.00 0.86
3146 3208 2.711009 CGCCCCATCCCCACATATATAT 59.289 50.000 0.00 0.00 0.00 0.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
196 197 2.278857 CTCCGCCTCGTGAATCGG 60.279 66.667 0.00 0.00 42.96 4.18
277 282 3.501062 ACTCGAAGATACGCGGATCAATA 59.499 43.478 31.85 13.76 33.89 1.90
278 283 2.293677 ACTCGAAGATACGCGGATCAAT 59.706 45.455 31.85 20.56 33.89 2.57
325 330 4.744795 AATCGTATCAGGATCATAGCCC 57.255 45.455 0.00 0.00 0.00 5.19
351 356 4.021925 GGACGCAGCTGGGAAGGT 62.022 66.667 34.63 14.41 0.00 3.50
365 370 4.688511 TGTTGCATATACAAAACGGGAC 57.311 40.909 0.00 0.00 0.00 4.46
384 389 3.694364 CGGAGCCTCAGCAATATGT 57.306 52.632 0.00 0.00 43.56 2.29
459 469 0.530870 GAGTACGCCCAGCCATCTTC 60.531 60.000 0.00 0.00 0.00 2.87
491 507 1.585297 ATGCACGCATGATTCGATCA 58.415 45.000 3.17 0.00 44.55 2.92
669 691 3.681417 CACATGTCAGTGACTGTACATGG 59.319 47.826 34.31 26.53 44.35 3.66
673 695 2.989840 GCTCACATGTCAGTGACTGTAC 59.010 50.000 23.29 9.91 43.18 2.90
1024 1060 0.655208 CCGCGTGCTATGCAACAATA 59.345 50.000 4.92 0.00 41.47 1.90
1134 1170 1.450312 CTTCATCTCCGCGGCCTTT 60.450 57.895 23.51 1.44 0.00 3.11
1317 1362 6.825721 TCAAGTAGGTACTTACAGCTAGGTAC 59.174 42.308 16.55 1.27 44.19 3.34
1320 1365 6.770746 TTCAAGTAGGTACTTACAGCTAGG 57.229 41.667 16.55 1.01 44.19 3.02
1381 1427 2.414161 CGCACAAAGGTAAGCTTAAGCC 60.414 50.000 23.71 8.69 43.38 4.35
1449 1495 2.258591 CTGTACTGCACGTCGGCT 59.741 61.111 0.00 0.00 34.04 5.52
1491 1537 2.660064 CCGGCTGGAGCTGTTAGGT 61.660 63.158 5.28 0.00 45.66 3.08
1635 1684 0.820871 CTAGCTCTTCCGTGCTTCCT 59.179 55.000 0.00 0.00 40.24 3.36
1761 1812 1.852309 TCTGGCTCTGATCCTCTCTCT 59.148 52.381 0.00 0.00 0.00 3.10
1801 1852 5.107298 GCCAGTTTGATAGCTTATCGATCAC 60.107 44.000 0.00 0.00 36.70 3.06
1810 1864 1.453155 CACCGCCAGTTTGATAGCTT 58.547 50.000 0.00 0.00 0.00 3.74
1864 1918 1.446907 CAGAACGAAAGCATCAGCCT 58.553 50.000 0.00 0.00 43.56 4.58
1915 1969 4.365899 TGCATATATCGATCGTGGGTAC 57.634 45.455 15.94 1.65 0.00 3.34
1916 1970 4.401202 ACATGCATATATCGATCGTGGGTA 59.599 41.667 15.94 5.02 0.00 3.69
1919 1973 6.885735 TTTACATGCATATATCGATCGTGG 57.114 37.500 15.94 0.95 0.00 4.94
1925 1979 8.846943 AAACAGGATTTACATGCATATATCGA 57.153 30.769 0.00 0.00 33.22 3.59
1970 2024 5.131475 TGTTTCCTCTACAAACTGGTAACCT 59.869 40.000 0.00 0.00 35.19 3.50
1999 2056 5.885230 AGTACTACTACGCAACACATGTA 57.115 39.130 0.00 0.00 0.00 2.29
2000 2057 4.778534 AGTACTACTACGCAACACATGT 57.221 40.909 0.00 0.00 0.00 3.21
2013 2070 9.262358 GTCTGAAGTCAATTTTGAAGTACTACT 57.738 33.333 0.00 0.00 39.21 2.57
2157 2218 5.849475 TGGAGTTAGGGGCATGAGATAATTA 59.151 40.000 0.00 0.00 0.00 1.40
2158 2219 4.665009 TGGAGTTAGGGGCATGAGATAATT 59.335 41.667 0.00 0.00 0.00 1.40
2176 2237 6.330250 AGGGTATTGAACTATGCTTATGGAGT 59.670 38.462 0.00 0.00 0.00 3.85
2220 2281 7.840931 AGGGGATGATTTGTTTCAATAAAGAC 58.159 34.615 0.00 0.00 0.00 3.01
2239 2300 3.823330 GCGACGACACGAGGGGAT 61.823 66.667 0.00 0.00 35.09 3.85
2243 2305 0.591741 GGATAAGCGACGACACGAGG 60.592 60.000 0.00 0.00 35.09 4.63
2384 2446 4.271291 GCTTCGAGTCCATAAACATTCTCC 59.729 45.833 0.00 0.00 0.00 3.71
2397 2459 1.518302 GAGGGGAAGCTTCGAGTCC 59.482 63.158 19.91 16.92 0.00 3.85
2398 2460 1.518302 GGAGGGGAAGCTTCGAGTC 59.482 63.158 19.91 14.60 0.00 3.36
2399 2461 1.990614 GGGAGGGGAAGCTTCGAGT 60.991 63.158 19.91 6.58 0.00 4.18
2400 2462 2.736826 GGGGAGGGGAAGCTTCGAG 61.737 68.421 19.91 0.00 0.00 4.04
2401 2463 2.687566 GGGGAGGGGAAGCTTCGA 60.688 66.667 19.91 0.00 0.00 3.71
2402 2464 2.689034 AGGGGAGGGGAAGCTTCG 60.689 66.667 19.91 0.00 0.00 3.79
2403 2465 2.379459 GGAGGGGAGGGGAAGCTTC 61.379 68.421 18.54 18.54 0.00 3.86
2404 2466 2.286502 GGAGGGGAGGGGAAGCTT 60.287 66.667 0.00 0.00 0.00 3.74
2405 2467 4.439901 GGGAGGGGAGGGGAAGCT 62.440 72.222 0.00 0.00 0.00 3.74
2406 2468 4.439901 AGGGAGGGGAGGGGAAGC 62.440 72.222 0.00 0.00 0.00 3.86
2407 2469 2.040359 GAGGGAGGGGAGGGGAAG 60.040 72.222 0.00 0.00 0.00 3.46
2408 2470 3.707189 GGAGGGAGGGGAGGGGAA 61.707 72.222 0.00 0.00 0.00 3.97
2477 2539 4.825679 GGAGGGAGGAGGTGGGGG 62.826 77.778 0.00 0.00 0.00 5.40
2478 2540 3.700350 AGGAGGGAGGAGGTGGGG 61.700 72.222 0.00 0.00 0.00 4.96
2479 2541 2.041405 GAGGAGGGAGGAGGTGGG 60.041 72.222 0.00 0.00 0.00 4.61
2480 2542 2.041405 GGAGGAGGGAGGAGGTGG 60.041 72.222 0.00 0.00 0.00 4.61
2481 2543 1.687493 GTGGAGGAGGGAGGAGGTG 60.687 68.421 0.00 0.00 0.00 4.00
2482 2544 2.781406 GTGGAGGAGGGAGGAGGT 59.219 66.667 0.00 0.00 0.00 3.85
2483 2545 2.041405 GGTGGAGGAGGGAGGAGG 60.041 72.222 0.00 0.00 0.00 4.30
2484 2546 2.443016 CGGTGGAGGAGGGAGGAG 60.443 72.222 0.00 0.00 0.00 3.69
2485 2547 3.273654 ACGGTGGAGGAGGGAGGA 61.274 66.667 0.00 0.00 0.00 3.71
2486 2548 2.760385 GACGGTGGAGGAGGGAGG 60.760 72.222 0.00 0.00 0.00 4.30
2487 2549 3.141488 CGACGGTGGAGGAGGGAG 61.141 72.222 0.00 0.00 0.00 4.30
2520 2582 2.589159 GAAGGATCCCCGCTTCGC 60.589 66.667 8.55 0.00 37.58 4.70
2521 2583 2.279517 CGAAGGATCCCCGCTTCG 60.280 66.667 16.56 16.56 38.34 3.79
2522 2584 1.227292 GACGAAGGATCCCCGCTTC 60.227 63.158 20.18 11.62 37.58 3.86
2523 2585 2.732619 GGACGAAGGATCCCCGCTT 61.733 63.158 20.18 4.00 37.58 4.68
2524 2586 3.155167 GGACGAAGGATCCCCGCT 61.155 66.667 20.18 10.25 37.58 5.52
2542 2604 2.124320 CCATACCCCAAGTGCGGG 60.124 66.667 3.95 3.95 46.94 6.13
2543 2605 2.828549 GCCATACCCCAAGTGCGG 60.829 66.667 0.00 0.00 0.00 5.69
2544 2606 2.045438 TGCCATACCCCAAGTGCG 60.045 61.111 0.00 0.00 0.00 5.34
2545 2607 2.406616 CGTGCCATACCCCAAGTGC 61.407 63.158 0.00 0.00 0.00 4.40
2546 2608 1.748879 CCGTGCCATACCCCAAGTG 60.749 63.158 0.00 0.00 0.00 3.16
2547 2609 2.674754 CCGTGCCATACCCCAAGT 59.325 61.111 0.00 0.00 0.00 3.16
2548 2610 2.124320 CCCGTGCCATACCCCAAG 60.124 66.667 0.00 0.00 0.00 3.61
2549 2611 4.434354 GCCCGTGCCATACCCCAA 62.434 66.667 0.00 0.00 0.00 4.12
2559 2621 4.148825 ACGAGATCTGGCCCGTGC 62.149 66.667 0.00 0.00 33.69 5.34
2560 2622 2.202797 CACGAGATCTGGCCCGTG 60.203 66.667 17.07 17.07 44.66 4.94
2561 2623 3.461773 CCACGAGATCTGGCCCGT 61.462 66.667 0.00 0.00 35.46 5.28
2566 2628 2.025767 CTCCCAGCCACGAGATCTGG 62.026 65.000 0.00 0.00 45.24 3.86
2567 2629 1.039785 TCTCCCAGCCACGAGATCTG 61.040 60.000 0.00 0.00 30.16 2.90
2568 2630 0.754957 CTCTCCCAGCCACGAGATCT 60.755 60.000 0.00 0.00 34.70 2.75
2569 2631 1.739049 CTCTCCCAGCCACGAGATC 59.261 63.158 0.00 0.00 34.70 2.75
2570 2632 1.760086 CCTCTCCCAGCCACGAGAT 60.760 63.158 0.00 0.00 34.70 2.75
2571 2633 2.363018 CCTCTCCCAGCCACGAGA 60.363 66.667 0.00 0.00 34.07 4.04
2572 2634 4.154347 GCCTCTCCCAGCCACGAG 62.154 72.222 0.00 0.00 0.00 4.18
2579 2641 3.222855 ATCGAGCGCCTCTCCCAG 61.223 66.667 2.29 0.00 38.62 4.45
2580 2642 3.531207 CATCGAGCGCCTCTCCCA 61.531 66.667 2.29 0.00 38.62 4.37
2581 2643 4.959596 GCATCGAGCGCCTCTCCC 62.960 72.222 2.29 0.00 38.62 4.30
2582 2644 4.959596 GGCATCGAGCGCCTCTCC 62.960 72.222 18.89 0.00 46.56 3.71
2625 2687 3.891400 CAATGCCACCATCGCCGG 61.891 66.667 0.00 0.00 0.00 6.13
2626 2688 3.891400 CCAATGCCACCATCGCCG 61.891 66.667 0.00 0.00 0.00 6.46
2627 2689 2.440065 TCCAATGCCACCATCGCC 60.440 61.111 0.00 0.00 0.00 5.54
2628 2690 2.800736 GTCCAATGCCACCATCGC 59.199 61.111 0.00 0.00 0.00 4.58
2629 2691 2.472059 CCGTCCAATGCCACCATCG 61.472 63.158 0.00 0.00 0.00 3.84
2630 2692 2.120909 CCCGTCCAATGCCACCATC 61.121 63.158 0.00 0.00 0.00 3.51
2631 2693 2.044053 CCCGTCCAATGCCACCAT 60.044 61.111 0.00 0.00 0.00 3.55
2637 2699 3.499737 CTGTCGCCCGTCCAATGC 61.500 66.667 0.00 0.00 0.00 3.56
2638 2700 2.819595 CCTGTCGCCCGTCCAATG 60.820 66.667 0.00 0.00 0.00 2.82
2639 2701 4.778143 GCCTGTCGCCCGTCCAAT 62.778 66.667 0.00 0.00 0.00 3.16
2650 2712 4.760047 ACGACCATGCCGCCTGTC 62.760 66.667 5.77 0.00 0.00 3.51
2655 2717 3.799755 GAACCACGACCATGCCGC 61.800 66.667 5.77 0.00 0.00 6.53
2656 2718 3.487202 CGAACCACGACCATGCCG 61.487 66.667 0.00 4.51 45.77 5.69
2657 2719 3.124921 CCGAACCACGACCATGCC 61.125 66.667 0.00 0.00 45.77 4.40
2658 2720 3.124921 CCCGAACCACGACCATGC 61.125 66.667 0.00 0.00 45.77 4.06
2659 2721 1.302192 AACCCGAACCACGACCATG 60.302 57.895 0.00 0.00 45.77 3.66
2660 2722 1.302192 CAACCCGAACCACGACCAT 60.302 57.895 0.00 0.00 45.77 3.55
2661 2723 2.109387 CAACCCGAACCACGACCA 59.891 61.111 0.00 0.00 45.77 4.02
2662 2724 2.667199 CCAACCCGAACCACGACC 60.667 66.667 0.00 0.00 45.77 4.79
2663 2725 2.109593 ACCAACCCGAACCACGAC 59.890 61.111 0.00 0.00 45.77 4.34
2664 2726 2.109387 CACCAACCCGAACCACGA 59.891 61.111 0.00 0.00 45.77 4.35
2665 2727 2.975799 CCACCAACCCGAACCACG 60.976 66.667 0.00 0.00 42.18 4.94
2666 2728 2.190841 CACCACCAACCCGAACCAC 61.191 63.158 0.00 0.00 0.00 4.16
2667 2729 2.193517 CACCACCAACCCGAACCA 59.806 61.111 0.00 0.00 0.00 3.67
2668 2730 2.596338 CCACCACCAACCCGAACC 60.596 66.667 0.00 0.00 0.00 3.62
2669 2731 3.292159 GCCACCACCAACCCGAAC 61.292 66.667 0.00 0.00 0.00 3.95
2670 2732 4.939368 CGCCACCACCAACCCGAA 62.939 66.667 0.00 0.00 0.00 4.30
2706 2768 1.816074 TCCATGCTACGTTTCCCAAC 58.184 50.000 0.00 0.00 0.00 3.77
2707 2769 2.570415 TTCCATGCTACGTTTCCCAA 57.430 45.000 0.00 0.00 0.00 4.12
2708 2770 2.799126 ATTCCATGCTACGTTTCCCA 57.201 45.000 0.00 0.00 0.00 4.37
2709 2771 3.442273 TGAAATTCCATGCTACGTTTCCC 59.558 43.478 0.00 0.00 0.00 3.97
2710 2772 4.695217 TGAAATTCCATGCTACGTTTCC 57.305 40.909 0.00 0.00 0.00 3.13
2711 2773 7.401484 TTTTTGAAATTCCATGCTACGTTTC 57.599 32.000 0.00 0.00 0.00 2.78
2741 2803 7.094549 CCTAGATAGGTCTTTCGTGAGAATAGG 60.095 44.444 0.00 0.00 43.28 2.57
2742 2804 7.662258 TCCTAGATAGGTCTTTCGTGAGAATAG 59.338 40.741 5.82 0.00 45.98 1.73
2743 2805 7.515586 TCCTAGATAGGTCTTTCGTGAGAATA 58.484 38.462 5.82 0.00 45.98 1.75
2744 2806 6.366340 TCCTAGATAGGTCTTTCGTGAGAAT 58.634 40.000 5.82 0.00 45.98 2.40
2745 2807 5.752650 TCCTAGATAGGTCTTTCGTGAGAA 58.247 41.667 5.82 0.00 45.51 2.87
2746 2808 5.130643 TCTCCTAGATAGGTCTTTCGTGAGA 59.869 44.000 5.82 0.00 44.02 3.27
2747 2809 5.369833 TCTCCTAGATAGGTCTTTCGTGAG 58.630 45.833 5.82 0.00 44.02 3.51
2748 2810 5.369409 TCTCCTAGATAGGTCTTTCGTGA 57.631 43.478 5.82 0.00 44.02 4.35
2749 2811 5.563867 GCATCTCCTAGATAGGTCTTTCGTG 60.564 48.000 5.82 0.00 44.02 4.35
2750 2812 4.521256 GCATCTCCTAGATAGGTCTTTCGT 59.479 45.833 5.82 0.00 44.02 3.85
2751 2813 4.520874 TGCATCTCCTAGATAGGTCTTTCG 59.479 45.833 5.82 0.00 44.02 3.46
2752 2814 6.603940 ATGCATCTCCTAGATAGGTCTTTC 57.396 41.667 5.82 0.00 44.02 2.62
2753 2815 6.154363 GCTATGCATCTCCTAGATAGGTCTTT 59.846 42.308 0.19 0.00 44.02 2.52
2754 2816 5.656416 GCTATGCATCTCCTAGATAGGTCTT 59.344 44.000 0.19 0.00 44.02 3.01
2755 2817 5.200483 GCTATGCATCTCCTAGATAGGTCT 58.800 45.833 0.19 0.00 44.02 3.85
2756 2818 4.952957 TGCTATGCATCTCCTAGATAGGTC 59.047 45.833 0.19 0.00 37.97 3.85
2757 2819 4.940483 TGCTATGCATCTCCTAGATAGGT 58.060 43.478 0.19 0.00 37.97 3.08
2758 2820 5.659463 GTTGCTATGCATCTCCTAGATAGG 58.341 45.833 0.19 0.00 40.79 2.57
2759 2821 5.124617 TCGTTGCTATGCATCTCCTAGATAG 59.875 44.000 0.19 0.00 38.76 2.08
2760 2822 5.010282 TCGTTGCTATGCATCTCCTAGATA 58.990 41.667 0.19 0.00 38.76 1.98
2761 2823 3.829026 TCGTTGCTATGCATCTCCTAGAT 59.171 43.478 0.19 0.00 38.76 1.98
2762 2824 3.222603 TCGTTGCTATGCATCTCCTAGA 58.777 45.455 0.19 0.00 38.76 2.43
2763 2825 3.254411 TCTCGTTGCTATGCATCTCCTAG 59.746 47.826 0.19 0.00 38.76 3.02
2764 2826 3.222603 TCTCGTTGCTATGCATCTCCTA 58.777 45.455 0.19 0.00 38.76 2.94
2765 2827 2.034878 TCTCGTTGCTATGCATCTCCT 58.965 47.619 0.19 0.00 38.76 3.69
2766 2828 2.402305 CTCTCGTTGCTATGCATCTCC 58.598 52.381 0.19 0.00 38.76 3.71
2767 2829 2.402305 CCTCTCGTTGCTATGCATCTC 58.598 52.381 0.19 0.00 38.76 2.75
2768 2830 1.069823 CCCTCTCGTTGCTATGCATCT 59.930 52.381 0.19 0.00 38.76 2.90
2769 2831 1.506493 CCCTCTCGTTGCTATGCATC 58.494 55.000 0.19 0.00 38.76 3.91
2770 2832 0.107456 CCCCTCTCGTTGCTATGCAT 59.893 55.000 3.79 3.79 38.76 3.96
2771 2833 1.522092 CCCCTCTCGTTGCTATGCA 59.478 57.895 0.00 0.00 36.47 3.96
2772 2834 1.227674 CCCCCTCTCGTTGCTATGC 60.228 63.158 0.00 0.00 0.00 3.14
2773 2835 0.390860 CTCCCCCTCTCGTTGCTATG 59.609 60.000 0.00 0.00 0.00 2.23
2774 2836 0.261991 TCTCCCCCTCTCGTTGCTAT 59.738 55.000 0.00 0.00 0.00 2.97
2775 2837 0.395862 CTCTCCCCCTCTCGTTGCTA 60.396 60.000 0.00 0.00 0.00 3.49
2776 2838 1.684049 CTCTCCCCCTCTCGTTGCT 60.684 63.158 0.00 0.00 0.00 3.91
2777 2839 1.985116 ACTCTCCCCCTCTCGTTGC 60.985 63.158 0.00 0.00 0.00 4.17
2778 2840 0.900647 ACACTCTCCCCCTCTCGTTG 60.901 60.000 0.00 0.00 0.00 4.10
2779 2841 0.900647 CACACTCTCCCCCTCTCGTT 60.901 60.000 0.00 0.00 0.00 3.85
2780 2842 1.304547 CACACTCTCCCCCTCTCGT 60.305 63.158 0.00 0.00 0.00 4.18
2781 2843 1.304547 ACACACTCTCCCCCTCTCG 60.305 63.158 0.00 0.00 0.00 4.04
2782 2844 0.040499 AGACACACTCTCCCCCTCTC 59.960 60.000 0.00 0.00 0.00 3.20
2783 2845 1.006162 GTAGACACACTCTCCCCCTCT 59.994 57.143 0.00 0.00 0.00 3.69
2784 2846 1.476477 GTAGACACACTCTCCCCCTC 58.524 60.000 0.00 0.00 0.00 4.30
2785 2847 0.323542 CGTAGACACACTCTCCCCCT 60.324 60.000 0.00 0.00 0.00 4.79
2786 2848 0.611340 ACGTAGACACACTCTCCCCC 60.611 60.000 0.00 0.00 0.00 5.40
2787 2849 1.742268 GTACGTAGACACACTCTCCCC 59.258 57.143 0.00 0.00 0.00 4.81
2788 2850 1.742268 GGTACGTAGACACACTCTCCC 59.258 57.143 0.00 0.00 0.00 4.30
2789 2851 1.742268 GGGTACGTAGACACACTCTCC 59.258 57.143 0.00 0.00 0.00 3.71
2790 2852 2.677337 GAGGGTACGTAGACACACTCTC 59.323 54.545 10.55 4.79 41.06 3.20
2791 2853 2.709213 GAGGGTACGTAGACACACTCT 58.291 52.381 10.55 0.00 41.06 3.24
2792 2854 1.396301 CGAGGGTACGTAGACACACTC 59.604 57.143 8.17 8.17 40.93 3.51
2793 2855 1.271054 ACGAGGGTACGTAGACACACT 60.271 52.381 0.00 0.00 44.72 3.55
2794 2856 1.160137 ACGAGGGTACGTAGACACAC 58.840 55.000 0.00 0.00 44.72 3.82
2795 2857 2.760634 TACGAGGGTACGTAGACACA 57.239 50.000 0.00 0.00 44.72 3.72
2818 2880 1.069296 TGTCAAATGCTTCCGCTTTCG 60.069 47.619 0.00 0.00 36.97 3.46
2819 2881 2.704725 TGTCAAATGCTTCCGCTTTC 57.295 45.000 0.00 0.00 36.97 2.62
2820 2882 2.100584 TGTTGTCAAATGCTTCCGCTTT 59.899 40.909 0.00 0.00 36.97 3.51
2821 2883 1.680735 TGTTGTCAAATGCTTCCGCTT 59.319 42.857 0.00 0.00 36.97 4.68
2822 2884 1.001378 GTGTTGTCAAATGCTTCCGCT 60.001 47.619 0.00 0.00 36.97 5.52
2823 2885 1.268999 TGTGTTGTCAAATGCTTCCGC 60.269 47.619 0.00 0.00 0.00 5.54
2824 2886 2.033299 ACTGTGTTGTCAAATGCTTCCG 59.967 45.455 0.00 0.00 0.00 4.30
2825 2887 3.715628 ACTGTGTTGTCAAATGCTTCC 57.284 42.857 0.00 0.00 0.00 3.46
2826 2888 4.671377 TCAACTGTGTTGTCAAATGCTTC 58.329 39.130 9.78 0.00 0.00 3.86
2827 2889 4.717233 TCAACTGTGTTGTCAAATGCTT 57.283 36.364 9.78 0.00 0.00 3.91
2828 2890 4.098349 ACATCAACTGTGTTGTCAAATGCT 59.902 37.500 9.78 0.00 36.48 3.79
2829 2891 4.362279 ACATCAACTGTGTTGTCAAATGC 58.638 39.130 9.78 0.00 36.48 3.56
2830 2892 6.728200 ACTACATCAACTGTGTTGTCAAATG 58.272 36.000 9.78 8.61 38.39 2.32
2831 2893 6.942532 ACTACATCAACTGTGTTGTCAAAT 57.057 33.333 9.78 0.00 38.39 2.32
2832 2894 6.358118 GACTACATCAACTGTGTTGTCAAA 57.642 37.500 13.26 0.00 45.34 2.69
2833 2895 5.984233 GACTACATCAACTGTGTTGTCAA 57.016 39.130 13.26 0.00 45.34 3.18
2835 2897 5.984233 TTGACTACATCAACTGTGTTGTC 57.016 39.130 11.87 11.87 45.83 3.18
2845 2907 6.513180 ACGAGAAGAAGTTTGACTACATCAA 58.487 36.000 0.00 0.00 45.92 2.57
2846 2908 6.085555 ACGAGAAGAAGTTTGACTACATCA 57.914 37.500 0.00 0.00 34.65 3.07
2847 2909 6.089685 GGAACGAGAAGAAGTTTGACTACATC 59.910 42.308 0.00 0.00 0.00 3.06
2848 2910 5.927115 GGAACGAGAAGAAGTTTGACTACAT 59.073 40.000 0.00 0.00 0.00 2.29
2849 2911 5.287226 GGAACGAGAAGAAGTTTGACTACA 58.713 41.667 0.00 0.00 0.00 2.74
2850 2912 5.825905 GGAACGAGAAGAAGTTTGACTAC 57.174 43.478 0.00 0.00 0.00 2.73
2868 2930 1.796617 CGGTACTTGATCGGTCGGAAC 60.797 57.143 0.00 0.00 0.00 3.62
2869 2931 0.452987 CGGTACTTGATCGGTCGGAA 59.547 55.000 0.00 0.00 0.00 4.30
2870 2932 0.392863 TCGGTACTTGATCGGTCGGA 60.393 55.000 0.00 0.00 30.29 4.55
2871 2933 0.452987 TTCGGTACTTGATCGGTCGG 59.547 55.000 0.00 0.00 30.29 4.79
2872 2934 1.542544 GTTCGGTACTTGATCGGTCG 58.457 55.000 0.00 0.00 30.29 4.79
2873 2935 1.135575 ACGTTCGGTACTTGATCGGTC 60.136 52.381 17.26 0.00 33.92 4.79
2874 2936 0.883833 ACGTTCGGTACTTGATCGGT 59.116 50.000 17.26 0.00 33.92 4.69
2875 2937 2.444351 GTACGTTCGGTACTTGATCGG 58.556 52.381 17.26 0.00 46.50 4.18
2884 2946 1.269448 GGAGGTGTTGTACGTTCGGTA 59.731 52.381 0.00 0.00 0.00 4.02
2885 2947 0.032540 GGAGGTGTTGTACGTTCGGT 59.967 55.000 0.00 0.00 0.00 4.69
2886 2948 1.005294 CGGAGGTGTTGTACGTTCGG 61.005 60.000 0.00 0.00 41.32 4.30
2887 2949 0.040157 TCGGAGGTGTTGTACGTTCG 60.040 55.000 0.00 0.00 45.23 3.95
2888 2950 1.000938 ACTCGGAGGTGTTGTACGTTC 60.001 52.381 10.23 0.00 0.00 3.95
2889 2951 1.035139 ACTCGGAGGTGTTGTACGTT 58.965 50.000 10.23 0.00 0.00 3.99
2890 2952 1.035139 AACTCGGAGGTGTTGTACGT 58.965 50.000 10.23 0.00 0.00 3.57
2891 2953 2.144482 AAACTCGGAGGTGTTGTACG 57.856 50.000 10.23 0.00 0.00 3.67
2892 2954 2.032290 GCAAAACTCGGAGGTGTTGTAC 60.032 50.000 10.23 0.00 36.93 2.90
2893 2955 2.215196 GCAAAACTCGGAGGTGTTGTA 58.785 47.619 10.23 0.00 36.93 2.41
2894 2956 1.021968 GCAAAACTCGGAGGTGTTGT 58.978 50.000 10.23 0.00 36.93 3.32
2895 2957 1.021202 TGCAAAACTCGGAGGTGTTG 58.979 50.000 10.23 10.87 37.45 3.33
2896 2958 1.021968 GTGCAAAACTCGGAGGTGTT 58.978 50.000 10.23 0.00 0.00 3.32
2897 2959 0.107410 TGTGCAAAACTCGGAGGTGT 60.107 50.000 10.23 0.00 0.00 4.16
2898 2960 0.307760 GTGTGCAAAACTCGGAGGTG 59.692 55.000 10.23 5.69 0.00 4.00
2899 2961 1.157870 CGTGTGCAAAACTCGGAGGT 61.158 55.000 10.23 0.00 41.05 3.85
2900 2962 1.569493 CGTGTGCAAAACTCGGAGG 59.431 57.895 10.23 0.00 41.05 4.30
2905 2967 1.064060 AGCTGAACGTGTGCAAAACTC 59.936 47.619 9.71 0.00 0.00 3.01
2906 2968 1.064060 GAGCTGAACGTGTGCAAAACT 59.936 47.619 0.00 0.00 0.00 2.66
2907 2969 1.466855 GAGCTGAACGTGTGCAAAAC 58.533 50.000 0.00 0.00 0.00 2.43
2908 2970 0.027455 CGAGCTGAACGTGTGCAAAA 59.973 50.000 0.00 0.00 0.00 2.44
2909 2971 0.808060 TCGAGCTGAACGTGTGCAAA 60.808 50.000 0.00 0.00 0.00 3.68
2910 2972 0.599991 ATCGAGCTGAACGTGTGCAA 60.600 50.000 0.00 0.00 0.00 4.08
2911 2973 1.006220 ATCGAGCTGAACGTGTGCA 60.006 52.632 0.00 0.00 0.00 4.57
2912 2974 1.008875 TCATCGAGCTGAACGTGTGC 61.009 55.000 0.00 0.00 0.00 4.57
2913 2975 0.710567 GTCATCGAGCTGAACGTGTG 59.289 55.000 0.00 0.00 0.00 3.82
2914 2976 0.729478 CGTCATCGAGCTGAACGTGT 60.729 55.000 0.00 0.00 39.71 4.49
2915 2977 0.729478 ACGTCATCGAGCTGAACGTG 60.729 55.000 12.23 3.66 40.62 4.49
2916 2978 0.454620 GACGTCATCGAGCTGAACGT 60.455 55.000 11.55 12.62 40.62 3.99
2917 2979 1.134530 GGACGTCATCGAGCTGAACG 61.135 60.000 18.91 0.00 40.62 3.95
2918 2980 0.802607 GGGACGTCATCGAGCTGAAC 60.803 60.000 18.91 0.00 40.62 3.18
2919 2981 0.965866 AGGGACGTCATCGAGCTGAA 60.966 55.000 18.91 0.00 40.62 3.02
2920 2982 1.377366 GAGGGACGTCATCGAGCTGA 61.377 60.000 18.91 0.00 40.62 4.26
2921 2983 1.064946 GAGGGACGTCATCGAGCTG 59.935 63.158 18.91 0.00 40.62 4.24
2922 2984 2.473760 CGAGGGACGTCATCGAGCT 61.474 63.158 28.32 3.30 38.72 4.09
2923 2985 1.989966 TTCGAGGGACGTCATCGAGC 61.990 60.000 30.77 10.93 45.23 5.03
2924 2986 0.450583 TTTCGAGGGACGTCATCGAG 59.549 55.000 30.77 16.93 45.23 4.04
2925 2987 1.065102 GATTTCGAGGGACGTCATCGA 59.935 52.381 29.82 29.82 43.19 3.59
2926 2988 1.065701 AGATTTCGAGGGACGTCATCG 59.934 52.381 27.08 27.08 43.13 3.84
2927 2989 2.860735 CAAGATTTCGAGGGACGTCATC 59.139 50.000 18.91 13.48 43.13 2.92
2928 2990 2.496070 TCAAGATTTCGAGGGACGTCAT 59.504 45.455 18.91 4.87 43.13 3.06
2929 2991 1.890489 TCAAGATTTCGAGGGACGTCA 59.110 47.619 18.91 0.00 43.13 4.35
2930 2992 2.649331 TCAAGATTTCGAGGGACGTC 57.351 50.000 7.13 7.13 43.13 4.34
2931 2993 2.159085 GGATCAAGATTTCGAGGGACGT 60.159 50.000 0.00 0.00 43.13 4.34
2932 2994 2.159099 TGGATCAAGATTTCGAGGGACG 60.159 50.000 0.00 0.00 44.09 4.79
2933 2995 3.462021 CTGGATCAAGATTTCGAGGGAC 58.538 50.000 0.00 0.00 0.00 4.46
2934 2996 2.158900 GCTGGATCAAGATTTCGAGGGA 60.159 50.000 0.00 0.00 0.00 4.20
2935 2997 2.216898 GCTGGATCAAGATTTCGAGGG 58.783 52.381 0.00 0.00 0.00 4.30
2936 2998 2.910199 TGCTGGATCAAGATTTCGAGG 58.090 47.619 0.00 0.00 0.00 4.63
2937 2999 4.334759 ACAATGCTGGATCAAGATTTCGAG 59.665 41.667 0.00 0.00 0.00 4.04
2938 3000 4.264253 ACAATGCTGGATCAAGATTTCGA 58.736 39.130 0.00 0.00 0.00 3.71
2939 3001 4.627611 ACAATGCTGGATCAAGATTTCG 57.372 40.909 0.00 0.00 0.00 3.46
2940 3002 6.203530 TCGATACAATGCTGGATCAAGATTTC 59.796 38.462 0.00 0.00 42.42 2.17
2941 3003 6.057533 TCGATACAATGCTGGATCAAGATTT 58.942 36.000 0.00 0.00 42.42 2.17
2942 3004 5.614308 TCGATACAATGCTGGATCAAGATT 58.386 37.500 0.00 0.00 42.42 2.40
2943 3005 5.219343 TCGATACAATGCTGGATCAAGAT 57.781 39.130 0.00 0.00 42.42 2.40
2944 3006 4.502087 CCTCGATACAATGCTGGATCAAGA 60.502 45.833 0.00 0.00 42.42 3.02
2945 3007 3.744942 CCTCGATACAATGCTGGATCAAG 59.255 47.826 0.00 0.00 42.42 3.02
2946 3008 3.387699 TCCTCGATACAATGCTGGATCAA 59.612 43.478 0.00 0.00 42.42 2.57
2947 3009 2.965147 TCCTCGATACAATGCTGGATCA 59.035 45.455 0.00 0.00 42.42 2.92
2948 3010 3.667497 TCCTCGATACAATGCTGGATC 57.333 47.619 0.00 0.00 39.29 3.36
2949 3011 3.389329 ACTTCCTCGATACAATGCTGGAT 59.611 43.478 0.00 0.00 0.00 3.41
2950 3012 2.766263 ACTTCCTCGATACAATGCTGGA 59.234 45.455 0.00 0.00 0.00 3.86
2951 3013 3.185246 ACTTCCTCGATACAATGCTGG 57.815 47.619 0.00 0.00 0.00 4.85
2952 3014 5.188327 TCTACTTCCTCGATACAATGCTG 57.812 43.478 0.00 0.00 0.00 4.41
2953 3015 5.536538 TCATCTACTTCCTCGATACAATGCT 59.463 40.000 0.00 0.00 0.00 3.79
2954 3016 5.773575 TCATCTACTTCCTCGATACAATGC 58.226 41.667 0.00 0.00 0.00 3.56
2955 3017 6.976088 ACTCATCTACTTCCTCGATACAATG 58.024 40.000 0.00 0.00 0.00 2.82
2956 3018 7.255660 GGAACTCATCTACTTCCTCGATACAAT 60.256 40.741 0.00 0.00 32.16 2.71
2957 3019 6.039493 GGAACTCATCTACTTCCTCGATACAA 59.961 42.308 0.00 0.00 32.16 2.41
2958 3020 5.531659 GGAACTCATCTACTTCCTCGATACA 59.468 44.000 0.00 0.00 32.16 2.29
2959 3021 5.334260 CGGAACTCATCTACTTCCTCGATAC 60.334 48.000 0.00 0.00 32.63 2.24
2960 3022 4.755629 CGGAACTCATCTACTTCCTCGATA 59.244 45.833 0.00 0.00 32.63 2.92
2961 3023 3.566322 CGGAACTCATCTACTTCCTCGAT 59.434 47.826 0.00 0.00 32.63 3.59
2962 3024 2.943690 CGGAACTCATCTACTTCCTCGA 59.056 50.000 0.00 0.00 32.63 4.04
2963 3025 2.683867 ACGGAACTCATCTACTTCCTCG 59.316 50.000 0.00 0.00 32.63 4.63
2964 3026 3.695060 TGACGGAACTCATCTACTTCCTC 59.305 47.826 0.00 0.00 32.63 3.71
2965 3027 3.697045 CTGACGGAACTCATCTACTTCCT 59.303 47.826 0.00 0.00 32.63 3.36
2966 3028 3.735514 GCTGACGGAACTCATCTACTTCC 60.736 52.174 0.00 0.00 0.00 3.46
2967 3029 3.119459 TGCTGACGGAACTCATCTACTTC 60.119 47.826 0.00 0.00 0.00 3.01
2968 3030 2.826128 TGCTGACGGAACTCATCTACTT 59.174 45.455 0.00 0.00 0.00 2.24
2969 3031 2.164624 GTGCTGACGGAACTCATCTACT 59.835 50.000 0.00 0.00 0.00 2.57
2970 3032 2.531206 GTGCTGACGGAACTCATCTAC 58.469 52.381 0.00 0.00 0.00 2.59
2971 3033 1.132453 CGTGCTGACGGAACTCATCTA 59.868 52.381 0.00 0.00 42.18 1.98
2972 3034 0.109086 CGTGCTGACGGAACTCATCT 60.109 55.000 0.00 0.00 42.18 2.90
2973 3035 0.109272 TCGTGCTGACGGAACTCATC 60.109 55.000 0.00 0.00 46.11 2.92
2974 3036 0.388649 GTCGTGCTGACGGAACTCAT 60.389 55.000 0.00 0.00 46.11 2.90
2975 3037 1.007734 GTCGTGCTGACGGAACTCA 60.008 57.895 0.00 0.00 46.11 3.41
2976 3038 3.843985 GTCGTGCTGACGGAACTC 58.156 61.111 0.00 0.00 46.11 3.01
2983 3045 3.490759 CCATGCCGTCGTGCTGAC 61.491 66.667 7.14 0.20 44.53 3.51
2984 3046 4.002506 ACCATGCCGTCGTGCTGA 62.003 61.111 7.14 0.00 0.00 4.26
2985 3047 3.792047 CACCATGCCGTCGTGCTG 61.792 66.667 7.14 3.84 0.00 4.41
2986 3048 4.002506 TCACCATGCCGTCGTGCT 62.003 61.111 7.14 0.00 0.00 4.40
2987 3049 3.788766 GTCACCATGCCGTCGTGC 61.789 66.667 0.00 0.00 0.00 5.34
2988 3050 3.478394 CGTCACCATGCCGTCGTG 61.478 66.667 0.00 0.00 0.00 4.35
2989 3051 4.735132 CCGTCACCATGCCGTCGT 62.735 66.667 0.00 0.00 0.00 4.34
2990 3052 4.735132 ACCGTCACCATGCCGTCG 62.735 66.667 0.00 0.00 0.00 5.12
2991 3053 2.852495 ATCACCGTCACCATGCCGTC 62.852 60.000 0.00 0.00 0.00 4.79
2992 3054 2.954684 ATCACCGTCACCATGCCGT 61.955 57.895 0.00 0.00 0.00 5.68
2993 3055 2.125147 ATCACCGTCACCATGCCG 60.125 61.111 0.00 0.00 0.00 5.69
2994 3056 2.114670 CCATCACCGTCACCATGCC 61.115 63.158 0.00 0.00 0.00 4.40
2995 3057 1.377202 ACCATCACCGTCACCATGC 60.377 57.895 0.00 0.00 0.00 4.06
2996 3058 0.036483 TCACCATCACCGTCACCATG 60.036 55.000 0.00 0.00 0.00 3.66
2997 3059 0.690192 TTCACCATCACCGTCACCAT 59.310 50.000 0.00 0.00 0.00 3.55
2998 3060 0.034756 CTTCACCATCACCGTCACCA 59.965 55.000 0.00 0.00 0.00 4.17
2999 3061 0.034896 ACTTCACCATCACCGTCACC 59.965 55.000 0.00 0.00 0.00 4.02
3000 3062 1.148310 CACTTCACCATCACCGTCAC 58.852 55.000 0.00 0.00 0.00 3.67
3001 3063 1.044611 TCACTTCACCATCACCGTCA 58.955 50.000 0.00 0.00 0.00 4.35
3002 3064 2.271800 GATCACTTCACCATCACCGTC 58.728 52.381 0.00 0.00 0.00 4.79
3003 3065 1.066143 GGATCACTTCACCATCACCGT 60.066 52.381 0.00 0.00 0.00 4.83
3004 3066 1.656652 GGATCACTTCACCATCACCG 58.343 55.000 0.00 0.00 0.00 4.94
3005 3067 1.656652 CGGATCACTTCACCATCACC 58.343 55.000 0.00 0.00 0.00 4.02
3006 3068 1.009829 GCGGATCACTTCACCATCAC 58.990 55.000 0.00 0.00 0.00 3.06
3007 3069 0.460109 CGCGGATCACTTCACCATCA 60.460 55.000 0.00 0.00 0.00 3.07
3008 3070 1.766143 GCGCGGATCACTTCACCATC 61.766 60.000 8.83 0.00 0.00 3.51
3009 3071 1.815421 GCGCGGATCACTTCACCAT 60.815 57.895 8.83 0.00 0.00 3.55
3010 3072 2.434185 GCGCGGATCACTTCACCA 60.434 61.111 8.83 0.00 0.00 4.17
3011 3073 2.434185 TGCGCGGATCACTTCACC 60.434 61.111 8.83 0.00 0.00 4.02
3012 3074 2.456119 CCTGCGCGGATCACTTCAC 61.456 63.158 20.25 0.00 33.16 3.18
3013 3075 2.125552 CCTGCGCGGATCACTTCA 60.126 61.111 20.25 0.00 33.16 3.02
3014 3076 2.892425 CCCTGCGCGGATCACTTC 60.892 66.667 20.25 0.00 33.16 3.01
3017 3079 4.221422 TAGCCCTGCGCGGATCAC 62.221 66.667 20.25 3.58 44.76 3.06
3018 3080 4.221422 GTAGCCCTGCGCGGATCA 62.221 66.667 20.25 0.00 44.76 2.92
3032 3094 3.693245 CGCAGTGCTTAGGCGTAG 58.307 61.111 14.33 0.00 45.27 3.51
3036 3098 2.225068 TATTCTCGCAGTGCTTAGGC 57.775 50.000 14.33 0.00 39.26 3.93
3037 3099 3.738282 GTCATATTCTCGCAGTGCTTAGG 59.262 47.826 14.33 0.00 0.00 2.69
3038 3100 3.738282 GGTCATATTCTCGCAGTGCTTAG 59.262 47.826 14.33 10.60 0.00 2.18
3039 3101 3.717707 GGTCATATTCTCGCAGTGCTTA 58.282 45.455 14.33 0.00 0.00 3.09
3040 3102 2.555199 GGTCATATTCTCGCAGTGCTT 58.445 47.619 14.33 0.00 0.00 3.91
3041 3103 1.536922 CGGTCATATTCTCGCAGTGCT 60.537 52.381 14.33 0.00 0.00 4.40
3042 3104 0.855349 CGGTCATATTCTCGCAGTGC 59.145 55.000 4.58 4.58 0.00 4.40
3043 3105 1.491670 CCGGTCATATTCTCGCAGTG 58.508 55.000 0.00 0.00 0.00 3.66
3044 3106 0.389391 CCCGGTCATATTCTCGCAGT 59.611 55.000 0.00 0.00 0.00 4.40
3045 3107 0.673985 TCCCGGTCATATTCTCGCAG 59.326 55.000 0.00 0.00 0.00 5.18
3046 3108 1.000843 CATCCCGGTCATATTCTCGCA 59.999 52.381 0.00 0.00 0.00 5.10
3047 3109 1.714794 CATCCCGGTCATATTCTCGC 58.285 55.000 0.00 0.00 0.00 5.03
3048 3110 1.000843 TGCATCCCGGTCATATTCTCG 59.999 52.381 0.00 0.00 0.00 4.04
3049 3111 2.839486 TGCATCCCGGTCATATTCTC 57.161 50.000 0.00 0.00 0.00 2.87
3050 3112 3.117888 AGTTTGCATCCCGGTCATATTCT 60.118 43.478 0.00 0.00 0.00 2.40
3051 3113 3.214328 AGTTTGCATCCCGGTCATATTC 58.786 45.455 0.00 0.00 0.00 1.75
3052 3114 3.297134 AGTTTGCATCCCGGTCATATT 57.703 42.857 0.00 0.00 0.00 1.28
3053 3115 4.326826 CATAGTTTGCATCCCGGTCATAT 58.673 43.478 0.00 0.00 0.00 1.78
3054 3116 3.495983 CCATAGTTTGCATCCCGGTCATA 60.496 47.826 0.00 0.00 0.00 2.15
3055 3117 2.575532 CATAGTTTGCATCCCGGTCAT 58.424 47.619 0.00 0.00 0.00 3.06
3056 3118 1.408127 CCATAGTTTGCATCCCGGTCA 60.408 52.381 0.00 0.00 0.00 4.02
3057 3119 1.134220 TCCATAGTTTGCATCCCGGTC 60.134 52.381 0.00 0.00 0.00 4.79
3058 3120 0.916086 TCCATAGTTTGCATCCCGGT 59.084 50.000 0.00 0.00 0.00 5.28
3059 3121 1.597742 CTCCATAGTTTGCATCCCGG 58.402 55.000 0.00 0.00 0.00 5.73
3060 3122 1.597742 CCTCCATAGTTTGCATCCCG 58.402 55.000 0.00 0.00 0.00 5.14
3061 3123 1.494721 TCCCTCCATAGTTTGCATCCC 59.505 52.381 0.00 0.00 0.00 3.85
3062 3124 2.487986 CCTCCCTCCATAGTTTGCATCC 60.488 54.545 0.00 0.00 0.00 3.51
3063 3125 2.856222 CCTCCCTCCATAGTTTGCATC 58.144 52.381 0.00 0.00 0.00 3.91
3064 3126 1.133668 GCCTCCCTCCATAGTTTGCAT 60.134 52.381 0.00 0.00 0.00 3.96
3065 3127 0.255890 GCCTCCCTCCATAGTTTGCA 59.744 55.000 0.00 0.00 0.00 4.08
3066 3128 0.815615 CGCCTCCCTCCATAGTTTGC 60.816 60.000 0.00 0.00 0.00 3.68
3067 3129 0.815615 GCGCCTCCCTCCATAGTTTG 60.816 60.000 0.00 0.00 0.00 2.93
3068 3130 1.527370 GCGCCTCCCTCCATAGTTT 59.473 57.895 0.00 0.00 0.00 2.66
3069 3131 2.444256 GGCGCCTCCCTCCATAGTT 61.444 63.158 22.15 0.00 0.00 2.24
3070 3132 2.844839 GGCGCCTCCCTCCATAGT 60.845 66.667 22.15 0.00 0.00 2.12
3071 3133 3.996124 CGGCGCCTCCCTCCATAG 61.996 72.222 26.68 0.00 0.00 2.23
3087 3149 5.494632 ACATCAATTGTTAGCCGTGTGCG 62.495 47.826 5.13 0.00 39.64 5.34
3088 3150 2.095263 ACATCAATTGTTAGCCGTGTGC 60.095 45.455 5.13 0.00 33.74 4.57
3089 3151 3.829886 ACATCAATTGTTAGCCGTGTG 57.170 42.857 5.13 0.00 33.74 3.82
3090 3152 3.568007 ACAACATCAATTGTTAGCCGTGT 59.432 39.130 5.13 0.00 46.90 4.49
3091 3153 3.913763 CACAACATCAATTGTTAGCCGTG 59.086 43.478 5.13 4.16 46.90 4.94
3092 3154 3.568007 ACACAACATCAATTGTTAGCCGT 59.432 39.130 5.13 0.00 46.90 5.68
3093 3155 4.158384 GACACAACATCAATTGTTAGCCG 58.842 43.478 5.13 0.00 46.90 5.52
3094 3156 4.218417 AGGACACAACATCAATTGTTAGCC 59.782 41.667 5.13 0.00 46.90 3.93
3095 3157 5.376854 AGGACACAACATCAATTGTTAGC 57.623 39.130 5.13 0.00 46.90 3.09
3096 3158 6.638063 CACAAGGACACAACATCAATTGTTAG 59.362 38.462 5.13 0.00 46.90 2.34
3097 3159 6.319911 TCACAAGGACACAACATCAATTGTTA 59.680 34.615 5.13 0.00 46.90 2.41
3098 3160 9.501441 CCTCACAAGGACACAACATCAATTGTT 62.501 40.741 5.13 0.00 46.80 2.83
3099 3161 4.644234 TCACAAGGACACAACATCAATTGT 59.356 37.500 5.13 0.00 43.67 2.71
3100 3162 5.185668 TCACAAGGACACAACATCAATTG 57.814 39.130 0.00 0.00 35.59 2.32
3101 3163 4.279169 CCTCACAAGGACACAACATCAATT 59.721 41.667 0.00 0.00 46.67 2.32
3102 3164 3.822735 CCTCACAAGGACACAACATCAAT 59.177 43.478 0.00 0.00 46.67 2.57
3103 3165 3.213506 CCTCACAAGGACACAACATCAA 58.786 45.455 0.00 0.00 46.67 2.57
3104 3166 2.849942 CCTCACAAGGACACAACATCA 58.150 47.619 0.00 0.00 46.67 3.07
3105 3167 1.537202 GCCTCACAAGGACACAACATC 59.463 52.381 0.00 0.00 46.67 3.06
3106 3168 1.609208 GCCTCACAAGGACACAACAT 58.391 50.000 0.00 0.00 46.67 2.71
3107 3169 0.813610 CGCCTCACAAGGACACAACA 60.814 55.000 0.00 0.00 46.67 3.33
3108 3170 1.941812 CGCCTCACAAGGACACAAC 59.058 57.895 0.00 0.00 46.67 3.32
3109 3171 1.891919 GCGCCTCACAAGGACACAA 60.892 57.895 0.00 0.00 46.67 3.33
3110 3172 2.280797 GCGCCTCACAAGGACACA 60.281 61.111 0.00 0.00 46.67 3.72
3111 3173 3.050275 GGCGCCTCACAAGGACAC 61.050 66.667 22.15 0.00 46.67 3.67
3112 3174 4.329545 GGGCGCCTCACAAGGACA 62.330 66.667 28.56 0.00 46.67 4.02
3115 3177 4.431131 ATGGGGCGCCTCACAAGG 62.431 66.667 35.86 0.00 46.44 3.61
3116 3178 2.825836 GATGGGGCGCCTCACAAG 60.826 66.667 35.86 0.00 0.00 3.16
3117 3179 4.424711 GGATGGGGCGCCTCACAA 62.425 66.667 35.86 9.99 0.00 3.33
3124 3186 1.847798 TATATGTGGGGATGGGGCGC 61.848 60.000 0.00 0.00 0.00 6.53
3125 3187 0.918983 ATATATGTGGGGATGGGGCG 59.081 55.000 0.00 0.00 0.00 6.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.