Multiple sequence alignment - TraesCS3B01G179100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G179100 chr3B 100.000 5889 0 0 1 5889 187147863 187153751 0.000000e+00 10876
1 TraesCS3B01G179100 chr3B 92.110 545 40 3 2 543 581661749 581662293 0.000000e+00 765
2 TraesCS3B01G179100 chr3B 98.246 171 2 1 4469 4639 461200575 461200406 1.240000e-76 298
3 TraesCS3B01G179100 chr3B 96.262 107 2 1 444 548 545805318 545805424 2.180000e-39 174
4 TraesCS3B01G179100 chr3B 100.000 92 0 0 2538 2629 187150491 187150400 2.820000e-38 171
5 TraesCS3B01G179100 chr3D 97.354 1852 41 7 2628 4474 130501569 130503417 0.000000e+00 3142
6 TraesCS3B01G179100 chr3D 91.572 1056 45 17 742 1769 130498710 130499749 0.000000e+00 1417
7 TraesCS3B01G179100 chr3D 96.046 784 17 4 1769 2539 130500788 130501570 0.000000e+00 1264
8 TraesCS3B01G179100 chr3D 93.216 737 36 6 4634 5358 130503417 130504151 0.000000e+00 1072
9 TraesCS3B01G179100 chr3D 93.160 307 19 2 140 445 191562822 191563127 3.240000e-122 449
10 TraesCS3B01G179100 chr3D 86.102 295 21 8 5357 5651 130504313 130504587 3.450000e-77 300
11 TraesCS3B01G179100 chr3D 96.842 95 3 0 2537 2631 275995647 275995741 6.110000e-35 159
12 TraesCS3B01G179100 chr3D 89.744 117 6 2 2533 2643 462197409 462197525 1.710000e-30 145
13 TraesCS3B01G179100 chr3A 86.425 1849 132 44 732 2539 142573409 142575179 0.000000e+00 1914
14 TraesCS3B01G179100 chr3A 95.221 1109 38 8 2745 3847 142575252 142576351 0.000000e+00 1740
15 TraesCS3B01G179100 chr3A 91.694 602 27 9 4634 5222 142577872 142578463 0.000000e+00 813
16 TraesCS3B01G179100 chr3A 95.213 376 14 3 3839 4213 142577084 142577456 5.080000e-165 592
17 TraesCS3B01G179100 chr3A 96.958 263 6 2 4212 4472 142577611 142577873 1.950000e-119 440
18 TraesCS3B01G179100 chr3A 85.897 156 15 6 5680 5832 142578806 142578957 6.110000e-35 159
19 TraesCS3B01G179100 chr3A 86.207 145 13 5 593 731 142573005 142573148 3.680000e-32 150
20 TraesCS3B01G179100 chr3A 94.595 74 1 1 2628 2701 142575178 142575248 1.730000e-20 111
21 TraesCS3B01G179100 chr5B 92.000 550 40 3 1 547 586856825 586857373 0.000000e+00 769
22 TraesCS3B01G179100 chr5B 89.911 337 31 3 150 483 711615377 711615713 1.170000e-116 431
23 TraesCS3B01G179100 chr5B 96.629 178 5 1 4466 4643 334784943 334785119 1.600000e-75 294
24 TraesCS3B01G179100 chr5B 97.386 153 3 1 1 152 92673921 92673769 5.850000e-65 259
25 TraesCS3B01G179100 chr6D 94.314 299 16 1 150 448 199150285 199149988 1.930000e-124 457
26 TraesCS3B01G179100 chr6D 96.809 94 2 1 2536 2629 431311852 431311760 7.900000e-34 156
27 TraesCS3B01G179100 chr6D 94.059 101 5 1 2529 2629 431311751 431311850 1.020000e-32 152
28 TraesCS3B01G179100 chr6D 94.949 99 0 1 2538 2631 428262041 428262139 3.680000e-32 150
29 TraesCS3B01G179100 chr6D 94.000 100 1 2 2535 2629 87082311 87082410 4.760000e-31 147
30 TraesCS3B01G179100 chr6D 88.889 117 5 4 2532 2643 51507418 51507531 2.860000e-28 137
31 TraesCS3B01G179100 chr7B 94.257 296 17 0 150 445 587458399 587458104 2.500000e-123 453
32 TraesCS3B01G179100 chr7B 94.257 296 17 0 150 445 711065453 711065748 2.500000e-123 453
33 TraesCS3B01G179100 chr7B 97.386 153 3 1 1 152 38684248 38684096 5.850000e-65 259
34 TraesCS3B01G179100 chr7B 95.152 165 5 3 1 163 164585362 164585199 2.110000e-64 257
35 TraesCS3B01G179100 chr7B 93.162 117 6 2 444 558 150822314 150822430 2.820000e-38 171
36 TraesCS3B01G179100 chrUn 92.903 310 20 2 137 445 56926160 56926468 3.240000e-122 449
37 TraesCS3B01G179100 chrUn 96.262 107 2 1 444 548 267218597 267218703 2.180000e-39 174
38 TraesCS3B01G179100 chrUn 93.913 115 4 3 444 556 13888375 13888262 2.820000e-38 171
39 TraesCS3B01G179100 chrUn 94.000 100 1 1 2536 2630 100242106 100242007 4.760000e-31 147
40 TraesCS3B01G179100 chrUn 93.878 98 1 2 2537 2629 56557335 56557238 6.150000e-30 143
41 TraesCS3B01G179100 chrUn 92.381 105 1 3 2532 2629 100242000 100242104 6.150000e-30 143
42 TraesCS3B01G179100 chrUn 93.814 97 0 1 2535 2631 37289162 37289252 2.210000e-29 141
43 TraesCS3B01G179100 chrUn 93.814 97 0 1 2535 2631 37292338 37292428 2.210000e-29 141
44 TraesCS3B01G179100 chrUn 93.814 97 1 2 2538 2629 56557238 56557334 2.210000e-29 141
45 TraesCS3B01G179100 chrUn 92.929 99 2 1 2536 2629 305213130 305213228 7.960000e-29 139
46 TraesCS3B01G179100 chrUn 88.793 116 7 2 2538 2648 305213228 305213114 2.860000e-28 137
47 TraesCS3B01G179100 chrUn 93.548 93 0 1 2538 2630 279936215 279936301 3.700000e-27 134
48 TraesCS3B01G179100 chrUn 89.908 109 3 2 2535 2641 289138434 289138332 3.700000e-27 134
49 TraesCS3B01G179100 chr2B 87.368 380 40 3 68 445 2408582 2408955 4.220000e-116 429
50 TraesCS3B01G179100 chr2B 98.810 168 1 1 4470 4637 8938520 8938686 1.240000e-76 298
51 TraesCS3B01G179100 chr2B 98.235 170 2 1 4468 4637 207716155 207716323 4.460000e-76 296
52 TraesCS3B01G179100 chr2B 98.235 170 2 1 4468 4637 207733370 207733538 4.460000e-76 296
53 TraesCS3B01G179100 chr2B 97.688 173 3 1 4470 4642 755513132 755512961 4.460000e-76 296
54 TraesCS3B01G179100 chr2B 97.917 96 0 1 2538 2631 206371277 206371182 1.310000e-36 165
55 TraesCS3B01G179100 chr2B 96.970 99 1 1 2538 2634 206371184 206371282 1.310000e-36 165
56 TraesCS3B01G179100 chr1B 98.824 170 1 1 4468 4637 67054051 67053883 9.590000e-78 302
57 TraesCS3B01G179100 chr1B 95.833 96 4 0 2534 2629 632658745 632658840 7.900000e-34 156
58 TraesCS3B01G179100 chr6B 97.714 175 2 2 4468 4641 137385210 137385383 3.450000e-77 300
59 TraesCS3B01G179100 chr6B 97.674 172 3 1 4471 4642 260545090 260544920 1.600000e-75 294
60 TraesCS3B01G179100 chr6B 94.118 102 4 2 2538 2637 46738098 46737997 2.840000e-33 154
61 TraesCS3B01G179100 chr6A 97.386 153 3 1 1 152 50268968 50269120 5.850000e-65 259
62 TraesCS3B01G179100 chr6A 91.603 131 5 5 424 548 39142648 39142518 6.070000e-40 176
63 TraesCS3B01G179100 chr4B 97.386 153 3 1 1 152 155562774 155562926 5.850000e-65 259
64 TraesCS3B01G179100 chr4A 91.620 179 7 5 1 178 68957228 68957057 2.120000e-59 241
65 TraesCS3B01G179100 chr4A 93.525 139 7 1 417 553 68956818 68956680 7.740000e-49 206
66 TraesCS3B01G179100 chr7A 96.296 108 2 2 444 549 126117892 126117999 6.070000e-40 176
67 TraesCS3B01G179100 chr7A 96.842 95 3 0 2535 2629 125149690 125149784 6.110000e-35 159
68 TraesCS3B01G179100 chr7A 97.826 92 2 0 2538 2629 125149784 125149693 6.110000e-35 159
69 TraesCS3B01G179100 chr5A 97.000 100 0 1 2536 2632 230755691 230755592 1.310000e-36 165
70 TraesCS3B01G179100 chr2D 95.192 104 2 3 2529 2630 189371346 189371244 1.700000e-35 161
71 TraesCS3B01G179100 chr2D 94.175 103 4 2 2529 2629 189371235 189371337 7.900000e-34 156
72 TraesCS3B01G179100 chr7D 95.918 98 1 1 2537 2631 635688980 635688883 7.900000e-34 156
73 TraesCS3B01G179100 chr7D 95.918 98 1 1 2537 2631 636310157 636310254 7.900000e-34 156
74 TraesCS3B01G179100 chr7D 93.396 106 2 1 2534 2634 540413344 540413449 1.020000e-32 152
75 TraesCS3B01G179100 chr7D 93.333 105 1 5 2534 2632 193352798 193352694 3.680000e-32 150
76 TraesCS3B01G179100 chr4D 93.458 107 1 4 2530 2630 72678670 72678776 2.840000e-33 154
77 TraesCS3B01G179100 chr4D 89.908 109 5 3 2538 2645 470128975 470129078 1.030000e-27 135
78 TraesCS3B01G179100 chr1D 95.000 100 2 2 2534 2630 276768885 276768786 2.840000e-33 154
79 TraesCS3B01G179100 chr1D 95.745 94 2 1 2538 2629 276768787 276768880 3.680000e-32 150
80 TraesCS3B01G179100 chr1D 92.233 103 2 2 2532 2629 174151169 174151270 2.210000e-29 141
81 TraesCS3B01G179100 chr1D 89.474 114 5 4 2535 2641 472174538 472174425 2.860000e-28 137
82 TraesCS3B01G179100 chr5D 94.949 99 2 1 2535 2630 285550850 285550752 1.020000e-32 152
83 TraesCS3B01G179100 chr5D 94.059 101 1 2 2534 2629 343630402 343630502 1.320000e-31 148
84 TraesCS3B01G179100 chr1A 94.949 99 0 1 2537 2630 189714909 189715007 3.680000e-32 150
85 TraesCS3B01G179100 chr2A 91.818 110 1 3 2534 2642 98882821 98882719 4.760000e-31 147


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G179100 chr3B 187147863 187153751 5888 False 10876.000 10876 100.00000 1 5889 1 chr3B.!!$F1 5888
1 TraesCS3B01G179100 chr3B 581661749 581662293 544 False 765.000 765 92.11000 2 543 1 chr3B.!!$F3 541
2 TraesCS3B01G179100 chr3D 130498710 130504587 5877 False 1439.000 3142 92.85800 742 5651 5 chr3D.!!$F4 4909
3 TraesCS3B01G179100 chr3A 142573005 142578957 5952 False 739.875 1914 91.52625 593 5832 8 chr3A.!!$F1 5239
4 TraesCS3B01G179100 chr5B 586856825 586857373 548 False 769.000 769 92.00000 1 547 1 chr5B.!!$F2 546
5 TraesCS3B01G179100 chr4A 68956680 68957228 548 True 223.500 241 92.57250 1 553 2 chr4A.!!$R1 552

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
225 227 0.040499 TAAGGCCCCGCTTTGGAAAT 59.960 50.000 0.00 0.00 42.00 2.17 F
566 600 0.307760 ACTTCCAACTTTTGCGAGCG 59.692 50.000 0.00 0.00 0.00 5.03 F
1986 3369 0.322648 TGAGCTGTCCAGTCATGTGG 59.677 55.000 0.00 0.00 39.19 4.17 F
2902 4324 2.108075 TCCATGGGAAGCTGTTTCTTCA 59.892 45.455 13.02 4.25 43.14 3.02 F
4085 6249 0.250234 TACACACTGCATCTCCTGGC 59.750 55.000 0.00 0.00 0.00 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1701 2033 2.094545 CACACAGCAATTTTAGGCTCCC 60.095 50.000 0.00 0.00 38.56 4.30 R
2281 3691 1.276622 ACTGAAATCCTACGGGTGCT 58.723 50.000 0.00 0.00 0.00 4.40 R
3101 4523 1.272872 ACTGAATCAGGGCTGCCAATT 60.273 47.619 22.05 15.92 35.51 2.32 R
4514 6838 0.037697 TGCGCCGAATGTAGTCACTT 60.038 50.000 4.18 0.00 0.00 3.16 R
5002 7327 0.673022 GGCGGCTGATGATGATCCTC 60.673 60.000 0.00 0.00 0.00 3.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 8.363761 AGCTAGTAACTTACACACTTTCCTAT 57.636 34.615 1.79 0.00 0.00 2.57
144 146 3.930848 GTGTGATGTTCCGGTAACTTAGG 59.069 47.826 0.00 0.00 38.99 2.69
180 182 2.172082 GTCCGGGTTTATTAGGCCTCTT 59.828 50.000 9.68 0.00 0.00 2.85
197 199 3.693085 CCTCTTAGCATCACAAGCATGTT 59.307 43.478 0.00 0.00 37.82 2.71
200 202 2.211250 AGCATCACAAGCATGTTCCT 57.789 45.000 0.00 0.00 37.82 3.36
217 219 1.567175 TCCTTTTTATAAGGCCCCGCT 59.433 47.619 0.00 0.00 37.34 5.52
225 227 0.040499 TAAGGCCCCGCTTTGGAAAT 59.960 50.000 0.00 0.00 42.00 2.17
265 297 2.815478 TCATTGGTTGCGTTGAAAACC 58.185 42.857 0.00 0.00 46.28 3.27
284 316 1.343789 CCATTGTTGTTGGTGCCATGA 59.656 47.619 0.00 0.00 0.00 3.07
303 335 9.237187 TGCCATGACTGAAAAATTAATACACTA 57.763 29.630 0.00 0.00 0.00 2.74
339 371 2.104331 GGCTGCATGCATGTGAGC 59.896 61.111 30.06 30.06 45.15 4.26
440 472 3.036091 CCTAATAAACCCGGACAGAGGA 58.964 50.000 0.73 0.00 0.00 3.71
497 531 4.864247 GCCACATAAGCAAAGTTGTATTGG 59.136 41.667 0.00 0.00 0.00 3.16
543 577 1.679977 CCCCATTGTGACCAGCCTG 60.680 63.158 0.00 0.00 0.00 4.85
547 581 1.271543 CCATTGTGACCAGCCTGAGAA 60.272 52.381 0.00 0.00 0.00 2.87
548 582 1.808945 CATTGTGACCAGCCTGAGAAC 59.191 52.381 0.00 0.00 0.00 3.01
549 583 1.131638 TTGTGACCAGCCTGAGAACT 58.868 50.000 0.00 0.00 0.00 3.01
550 584 1.131638 TGTGACCAGCCTGAGAACTT 58.868 50.000 0.00 0.00 0.00 2.66
551 585 1.070758 TGTGACCAGCCTGAGAACTTC 59.929 52.381 0.00 0.00 0.00 3.01
552 586 0.687354 TGACCAGCCTGAGAACTTCC 59.313 55.000 0.00 0.00 0.00 3.46
553 587 0.687354 GACCAGCCTGAGAACTTCCA 59.313 55.000 0.00 0.00 0.00 3.53
554 588 1.072331 GACCAGCCTGAGAACTTCCAA 59.928 52.381 0.00 0.00 0.00 3.53
555 589 1.202818 ACCAGCCTGAGAACTTCCAAC 60.203 52.381 0.00 0.00 0.00 3.77
556 590 1.072965 CCAGCCTGAGAACTTCCAACT 59.927 52.381 0.00 0.00 0.00 3.16
557 591 2.487986 CCAGCCTGAGAACTTCCAACTT 60.488 50.000 0.00 0.00 0.00 2.66
558 592 3.217626 CAGCCTGAGAACTTCCAACTTT 58.782 45.455 0.00 0.00 0.00 2.66
559 593 3.633986 CAGCCTGAGAACTTCCAACTTTT 59.366 43.478 0.00 0.00 0.00 2.27
560 594 3.633986 AGCCTGAGAACTTCCAACTTTTG 59.366 43.478 0.00 0.00 0.00 2.44
561 595 3.796844 GCCTGAGAACTTCCAACTTTTGC 60.797 47.826 0.00 0.00 0.00 3.68
562 596 3.548818 CCTGAGAACTTCCAACTTTTGCG 60.549 47.826 0.00 0.00 0.00 4.85
563 597 3.275143 TGAGAACTTCCAACTTTTGCGA 58.725 40.909 0.00 0.00 0.00 5.10
564 598 3.312421 TGAGAACTTCCAACTTTTGCGAG 59.688 43.478 0.00 0.00 0.00 5.03
565 599 2.033424 AGAACTTCCAACTTTTGCGAGC 59.967 45.455 0.00 0.00 0.00 5.03
566 600 0.307760 ACTTCCAACTTTTGCGAGCG 59.692 50.000 0.00 0.00 0.00 5.03
567 601 0.998727 CTTCCAACTTTTGCGAGCGC 60.999 55.000 8.08 8.08 42.35 5.92
578 612 3.895806 GCGAGCGCATTTACATCAA 57.104 47.368 11.47 0.00 41.49 2.57
579 613 1.734885 GCGAGCGCATTTACATCAAG 58.265 50.000 11.47 0.00 41.49 3.02
580 614 1.734885 CGAGCGCATTTACATCAAGC 58.265 50.000 11.47 0.00 0.00 4.01
581 615 1.062440 CGAGCGCATTTACATCAAGCA 59.938 47.619 11.47 0.00 0.00 3.91
582 616 2.476018 CGAGCGCATTTACATCAAGCAA 60.476 45.455 11.47 0.00 0.00 3.91
583 617 2.848302 GAGCGCATTTACATCAAGCAAC 59.152 45.455 11.47 0.00 0.00 4.17
584 618 2.489329 AGCGCATTTACATCAAGCAACT 59.511 40.909 11.47 0.00 0.00 3.16
585 619 3.057315 AGCGCATTTACATCAAGCAACTT 60.057 39.130 11.47 0.00 0.00 2.66
586 620 3.674753 GCGCATTTACATCAAGCAACTTT 59.325 39.130 0.30 0.00 0.00 2.66
587 621 4.150451 GCGCATTTACATCAAGCAACTTTT 59.850 37.500 0.30 0.00 0.00 2.27
588 622 5.333263 GCGCATTTACATCAAGCAACTTTTT 60.333 36.000 0.30 0.00 0.00 1.94
589 623 6.066410 CGCATTTACATCAAGCAACTTTTTG 58.934 36.000 0.00 0.00 35.62 2.44
590 624 6.292274 CGCATTTACATCAAGCAACTTTTTGT 60.292 34.615 0.00 0.00 34.90 2.83
591 625 6.847289 GCATTTACATCAAGCAACTTTTTGTG 59.153 34.615 0.00 0.00 34.90 3.33
622 656 8.804743 CATTTTTCTCTCAATGATATTGCACAC 58.195 33.333 0.00 0.00 32.91 3.82
625 659 7.776933 TTCTCTCAATGATATTGCACACTAC 57.223 36.000 0.00 0.00 0.00 2.73
631 665 9.282247 CTCAATGATATTGCACACTACTTTTTC 57.718 33.333 0.00 0.00 0.00 2.29
632 666 8.791675 TCAATGATATTGCACACTACTTTTTCA 58.208 29.630 0.00 0.00 0.00 2.69
633 667 8.853345 CAATGATATTGCACACTACTTTTTCAC 58.147 33.333 0.00 0.00 0.00 3.18
634 668 7.744087 TGATATTGCACACTACTTTTTCACT 57.256 32.000 0.00 0.00 0.00 3.41
636 670 4.630894 TTGCACACTACTTTTTCACTGG 57.369 40.909 0.00 0.00 0.00 4.00
637 671 3.616219 TGCACACTACTTTTTCACTGGT 58.384 40.909 0.00 0.00 0.00 4.00
638 672 4.771903 TGCACACTACTTTTTCACTGGTA 58.228 39.130 0.00 0.00 0.00 3.25
639 673 5.186942 TGCACACTACTTTTTCACTGGTAA 58.813 37.500 0.00 0.00 0.00 2.85
640 674 5.065474 TGCACACTACTTTTTCACTGGTAAC 59.935 40.000 0.00 0.00 0.00 2.50
696 735 9.782900 ATTTCTTTTAATAAATTCCTCCCTCCA 57.217 29.630 0.00 0.00 0.00 3.86
697 736 9.782900 TTTCTTTTAATAAATTCCTCCCTCCAT 57.217 29.630 0.00 0.00 0.00 3.41
710 749 4.445448 CCTCCCTCCATCCTGAATTAACTG 60.445 50.000 0.00 0.00 0.00 3.16
748 1047 3.081710 TGTCACGGAGATGGTAGAAGA 57.918 47.619 0.00 0.00 0.00 2.87
760 1059 4.618920 TGGTAGAAGACAAAGAGAACCC 57.381 45.455 0.00 0.00 0.00 4.11
769 1068 0.771755 AAAGAGAACCCACTGGACCC 59.228 55.000 0.00 0.00 34.81 4.46
779 1078 2.174639 CCCACTGGACCCAAGCATAATA 59.825 50.000 0.00 0.00 0.00 0.98
788 1087 8.862325 TGGACCCAAGCATAATATGTAATTAG 57.138 34.615 1.92 0.00 0.00 1.73
789 1088 8.444783 TGGACCCAAGCATAATATGTAATTAGT 58.555 33.333 1.92 0.00 0.00 2.24
806 1105 1.557099 AGTCCGAGCTTGTATCCACA 58.443 50.000 0.00 0.00 0.00 4.17
817 1116 4.439289 GCTTGTATCCACAAATTGAGCTCC 60.439 45.833 12.15 0.00 43.92 4.70
836 1135 4.265073 CTCCATTTTCTCCGTGGAAATCT 58.735 43.478 0.00 0.00 41.21 2.40
838 1137 5.183228 TCCATTTTCTCCGTGGAAATCTAC 58.817 41.667 0.00 0.00 38.99 2.59
1034 1345 4.436998 CCACCTCTCCGTCCACGC 62.437 72.222 0.00 0.00 38.18 5.34
1152 1463 4.415332 GAGAAGCCGTCGTCGCCA 62.415 66.667 0.00 0.00 35.54 5.69
1278 1589 2.445438 GCAACAGTACGAGCTCGCC 61.445 63.158 34.83 24.86 44.43 5.54
1344 1655 1.520787 GAACCGTCGATTGCCCGAT 60.521 57.895 0.00 0.00 40.91 4.18
1368 1679 6.111669 ACATGCAGTTGCTCTAGATGATAT 57.888 37.500 5.62 0.00 42.66 1.63
1369 1680 5.932883 ACATGCAGTTGCTCTAGATGATATG 59.067 40.000 5.62 0.49 42.66 1.78
1370 1681 4.891260 TGCAGTTGCTCTAGATGATATGG 58.109 43.478 5.62 0.00 42.66 2.74
1374 1685 6.931281 GCAGTTGCTCTAGATGATATGGTTAA 59.069 38.462 0.00 0.00 38.21 2.01
1439 1769 3.493350 GCATATGCAGATACGGGGATAGG 60.493 52.174 22.84 0.00 41.59 2.57
1495 1825 5.163488 TGCTCCTATCAAATGCTGAAAATGG 60.163 40.000 0.00 0.00 37.67 3.16
1520 1850 2.057922 ACATATGTTCCAGGGCCTAGG 58.942 52.381 5.28 10.90 0.00 3.02
1569 1901 0.623723 TAGGATTCCAACCCACCAGC 59.376 55.000 5.29 0.00 0.00 4.85
1593 1925 4.693532 ACAATCGATGTGGCACGT 57.306 50.000 13.11 13.11 41.93 4.49
1651 1983 7.695480 TTTGCTAAATTCTATGTTGCCTGTA 57.305 32.000 0.00 0.00 0.00 2.74
1656 1988 9.586435 GCTAAATTCTATGTTGCCTGTATTTTT 57.414 29.630 0.00 0.00 0.00 1.94
1685 2017 9.719355 TTGTTGTTGCTAAATCTTAGTCATCTA 57.281 29.630 0.00 0.00 0.00 1.98
1736 2068 2.124903 CTGTGTGAACGGTGTGTAGTC 58.875 52.381 0.00 0.00 0.00 2.59
1754 2086 6.199719 GTGTAGTCAAGCTAAACGTTACTGTT 59.800 38.462 0.00 0.00 29.09 3.16
1815 3186 5.192927 TGAGGATATGGTTTGATGTTGGTC 58.807 41.667 0.00 0.00 0.00 4.02
1859 3242 4.013050 TGAACAAAATGTCCACTGTCACA 58.987 39.130 0.00 0.00 0.00 3.58
1986 3369 0.322648 TGAGCTGTCCAGTCATGTGG 59.677 55.000 0.00 0.00 39.19 4.17
2155 3539 4.119556 TGCTACTCAGGTAGGCAGATAT 57.880 45.455 5.51 0.00 43.99 1.63
2158 3542 4.082463 GCTACTCAGGTAGGCAGATATGTC 60.082 50.000 5.51 0.00 43.99 3.06
2236 3623 7.868415 GGTCAGTCATATACTCTTGTACAATCC 59.132 40.741 9.13 0.00 35.76 3.01
2258 3645 4.171005 CACTGCATTGCCTTTGTATTCTG 58.829 43.478 6.12 0.00 0.00 3.02
2276 3686 6.661304 ATTCTGCCTTTCTCTTTGTTTCAT 57.339 33.333 0.00 0.00 0.00 2.57
2277 3687 7.765695 ATTCTGCCTTTCTCTTTGTTTCATA 57.234 32.000 0.00 0.00 0.00 2.15
2281 3691 9.295825 TCTGCCTTTCTCTTTGTTTCATATAAA 57.704 29.630 0.00 0.00 0.00 1.40
2282 3692 9.565213 CTGCCTTTCTCTTTGTTTCATATAAAG 57.435 33.333 0.00 0.00 36.58 1.85
2283 3693 8.028938 TGCCTTTCTCTTTGTTTCATATAAAGC 58.971 33.333 0.00 0.00 35.57 3.51
2284 3694 8.028938 GCCTTTCTCTTTGTTTCATATAAAGCA 58.971 33.333 0.00 0.00 35.57 3.91
2285 3695 9.346725 CCTTTCTCTTTGTTTCATATAAAGCAC 57.653 33.333 0.00 0.00 35.57 4.40
2286 3696 9.346725 CTTTCTCTTTGTTTCATATAAAGCACC 57.653 33.333 0.00 0.00 35.57 5.01
2287 3697 7.391148 TCTCTTTGTTTCATATAAAGCACCC 57.609 36.000 0.00 0.00 35.57 4.61
2288 3698 6.093495 TCTCTTTGTTTCATATAAAGCACCCG 59.907 38.462 0.00 0.00 35.57 5.28
2289 3699 5.708230 TCTTTGTTTCATATAAAGCACCCGT 59.292 36.000 0.00 0.00 35.57 5.28
2290 3700 6.879993 TCTTTGTTTCATATAAAGCACCCGTA 59.120 34.615 0.00 0.00 35.57 4.02
2291 3701 6.671614 TTGTTTCATATAAAGCACCCGTAG 57.328 37.500 0.00 0.00 0.00 3.51
2292 3702 7.678690 CTTTGTTTCATATAAAGCACCCGTAGG 60.679 40.741 0.00 0.00 36.39 3.18
2314 3724 6.106673 AGGATTTCAGTTAATGTGTCTACCG 58.893 40.000 0.00 0.00 0.00 4.02
2472 3882 3.706600 AACGGGAAGGTAGCACATTTA 57.293 42.857 0.00 0.00 0.00 1.40
2524 3941 3.714798 TCTTTTCCCAGGAAGTAGTGTGT 59.285 43.478 0.00 0.00 35.38 3.72
2537 3954 7.042335 GGAAGTAGTGTGTGTGCTCTTAATAT 58.958 38.462 0.00 0.00 0.00 1.28
2538 3955 8.195436 GGAAGTAGTGTGTGTGCTCTTAATATA 58.805 37.037 0.00 0.00 0.00 0.86
2539 3956 8.928270 AAGTAGTGTGTGTGCTCTTAATATAC 57.072 34.615 0.00 0.00 0.00 1.47
2540 3957 8.294954 AGTAGTGTGTGTGCTCTTAATATACT 57.705 34.615 0.00 0.00 0.00 2.12
2541 3958 8.407064 AGTAGTGTGTGTGCTCTTAATATACTC 58.593 37.037 0.00 0.00 0.00 2.59
2542 3959 6.574350 AGTGTGTGTGCTCTTAATATACTCC 58.426 40.000 0.00 0.00 0.00 3.85
2543 3960 5.753921 GTGTGTGTGCTCTTAATATACTCCC 59.246 44.000 0.00 0.00 0.00 4.30
2544 3961 5.661312 TGTGTGTGCTCTTAATATACTCCCT 59.339 40.000 0.00 0.00 0.00 4.20
2545 3962 6.183360 TGTGTGTGCTCTTAATATACTCCCTC 60.183 42.308 0.00 0.00 0.00 4.30
2546 3963 5.304614 TGTGTGCTCTTAATATACTCCCTCC 59.695 44.000 0.00 0.00 0.00 4.30
2547 3964 4.523173 TGTGCTCTTAATATACTCCCTCCG 59.477 45.833 0.00 0.00 0.00 4.63
2548 3965 4.523558 GTGCTCTTAATATACTCCCTCCGT 59.476 45.833 0.00 0.00 0.00 4.69
2549 3966 5.010820 GTGCTCTTAATATACTCCCTCCGTT 59.989 44.000 0.00 0.00 0.00 4.44
2550 3967 5.243283 TGCTCTTAATATACTCCCTCCGTTC 59.757 44.000 0.00 0.00 0.00 3.95
2551 3968 5.336610 GCTCTTAATATACTCCCTCCGTTCC 60.337 48.000 0.00 0.00 0.00 3.62
2552 3969 5.708544 TCTTAATATACTCCCTCCGTTCCA 58.291 41.667 0.00 0.00 0.00 3.53
2553 3970 6.138263 TCTTAATATACTCCCTCCGTTCCAA 58.862 40.000 0.00 0.00 0.00 3.53
2554 3971 6.612456 TCTTAATATACTCCCTCCGTTCCAAA 59.388 38.462 0.00 0.00 0.00 3.28
2555 3972 5.703730 AATATACTCCCTCCGTTCCAAAA 57.296 39.130 0.00 0.00 0.00 2.44
2556 3973 5.906772 ATATACTCCCTCCGTTCCAAAAT 57.093 39.130 0.00 0.00 0.00 1.82
2557 3974 7.383156 AATATACTCCCTCCGTTCCAAAATA 57.617 36.000 0.00 0.00 0.00 1.40
2558 3975 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
2559 3976 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
2560 3977 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
2561 3978 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
2562 3979 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
2563 3980 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
2564 3981 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
2565 3982 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
2566 3983 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
2567 3984 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
2568 3985 5.642063 TCCGTTCCAAAATAGATGACTCAAC 59.358 40.000 0.00 0.00 0.00 3.18
2569 3986 5.643777 CCGTTCCAAAATAGATGACTCAACT 59.356 40.000 0.00 0.00 0.00 3.16
2570 3987 6.149474 CCGTTCCAAAATAGATGACTCAACTT 59.851 38.462 0.00 0.00 0.00 2.66
2571 3988 7.308589 CCGTTCCAAAATAGATGACTCAACTTT 60.309 37.037 0.00 0.00 0.00 2.66
2572 3989 7.535258 CGTTCCAAAATAGATGACTCAACTTTG 59.465 37.037 0.00 0.00 0.00 2.77
2573 3990 8.352942 GTTCCAAAATAGATGACTCAACTTTGT 58.647 33.333 0.00 0.00 0.00 2.83
2574 3991 9.567776 TTCCAAAATAGATGACTCAACTTTGTA 57.432 29.630 0.00 0.00 0.00 2.41
2575 3992 8.999431 TCCAAAATAGATGACTCAACTTTGTAC 58.001 33.333 0.00 0.00 0.00 2.90
2576 3993 9.003658 CCAAAATAGATGACTCAACTTTGTACT 57.996 33.333 0.00 0.00 0.00 2.73
2615 4032 9.003658 AGTACAAAGTTGAGTCATCTATTTTGG 57.996 33.333 14.35 0.00 40.00 3.28
2616 4033 8.999431 GTACAAAGTTGAGTCATCTATTTTGGA 58.001 33.333 14.35 6.88 40.00 3.53
2617 4034 8.463930 ACAAAGTTGAGTCATCTATTTTGGAA 57.536 30.769 14.35 0.00 40.00 3.53
2618 4035 8.352942 ACAAAGTTGAGTCATCTATTTTGGAAC 58.647 33.333 14.35 0.00 40.00 3.62
2619 4036 6.727824 AGTTGAGTCATCTATTTTGGAACG 57.272 37.500 1.70 0.00 0.00 3.95
2620 4037 5.643777 AGTTGAGTCATCTATTTTGGAACGG 59.356 40.000 1.70 0.00 0.00 4.44
2621 4038 5.414789 TGAGTCATCTATTTTGGAACGGA 57.585 39.130 0.00 0.00 0.00 4.69
2622 4039 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
2623 4040 4.770795 AGTCATCTATTTTGGAACGGAGG 58.229 43.478 0.00 0.00 0.00 4.30
2624 4041 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
2625 4042 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
2626 4043 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
2706 4126 9.699703 GAAATACTATTTCACCTCAGTATCCTC 57.300 37.037 14.32 0.00 34.02 3.71
2733 4153 8.703604 TTCTACAGATTGCATAAGTTGAGTAC 57.296 34.615 0.00 0.00 0.00 2.73
2826 4246 7.781219 TCCCCTAAATTAGTTGCCTTATAAACC 59.219 37.037 0.00 0.00 0.00 3.27
2902 4324 2.108075 TCCATGGGAAGCTGTTTCTTCA 59.892 45.455 13.02 4.25 43.14 3.02
3459 4881 7.350467 CGTTGTAGACTGCTCTAAATACGATA 58.650 38.462 0.00 0.00 34.43 2.92
3506 4928 1.933181 GCTGGCACAAACAAAGGTTTC 59.067 47.619 0.00 0.00 45.18 2.78
3566 4988 6.183360 CCCAGGTTTGTTCATTGATATCTTCC 60.183 42.308 3.98 0.00 0.00 3.46
3930 6094 7.660112 TGTCTAAAACTTGATGATGCATTGTT 58.340 30.769 0.00 0.00 0.00 2.83
4085 6249 0.250234 TACACACTGCATCTCCTGGC 59.750 55.000 0.00 0.00 0.00 4.85
4149 6314 1.280133 TGACTTCTTCAGATGCCAGGG 59.720 52.381 0.00 0.00 0.00 4.45
4150 6315 0.622665 ACTTCTTCAGATGCCAGGGG 59.377 55.000 0.00 0.00 0.00 4.79
4264 6588 3.077359 ACAGTCTATTCTTTGCAGTGGC 58.923 45.455 0.00 0.00 41.68 5.01
4473 6797 3.445987 AGGTAGCCTGCTTCTTTCTACT 58.554 45.455 0.00 0.00 32.49 2.57
4474 6798 3.449377 AGGTAGCCTGCTTCTTTCTACTC 59.551 47.826 0.00 0.00 32.49 2.59
4475 6799 3.431068 GGTAGCCTGCTTCTTTCTACTCC 60.431 52.174 0.00 0.00 32.49 3.85
4476 6800 1.557371 AGCCTGCTTCTTTCTACTCCC 59.443 52.381 0.00 0.00 0.00 4.30
4477 6801 1.557371 GCCTGCTTCTTTCTACTCCCT 59.443 52.381 0.00 0.00 0.00 4.20
4478 6802 2.419436 GCCTGCTTCTTTCTACTCCCTC 60.419 54.545 0.00 0.00 0.00 4.30
4479 6803 2.169561 CCTGCTTCTTTCTACTCCCTCC 59.830 54.545 0.00 0.00 0.00 4.30
4480 6804 1.825474 TGCTTCTTTCTACTCCCTCCG 59.175 52.381 0.00 0.00 0.00 4.63
4481 6805 1.826096 GCTTCTTTCTACTCCCTCCGT 59.174 52.381 0.00 0.00 0.00 4.69
4482 6806 2.234168 GCTTCTTTCTACTCCCTCCGTT 59.766 50.000 0.00 0.00 0.00 4.44
4483 6807 3.676598 GCTTCTTTCTACTCCCTCCGTTC 60.677 52.174 0.00 0.00 0.00 3.95
4484 6808 2.454538 TCTTTCTACTCCCTCCGTTCC 58.545 52.381 0.00 0.00 0.00 3.62
4485 6809 2.042706 TCTTTCTACTCCCTCCGTTCCT 59.957 50.000 0.00 0.00 0.00 3.36
4486 6810 3.267812 TCTTTCTACTCCCTCCGTTCCTA 59.732 47.826 0.00 0.00 0.00 2.94
4487 6811 3.744940 TTCTACTCCCTCCGTTCCTAA 57.255 47.619 0.00 0.00 0.00 2.69
4488 6812 3.744940 TCTACTCCCTCCGTTCCTAAA 57.255 47.619 0.00 0.00 0.00 1.85
4489 6813 4.261411 TCTACTCCCTCCGTTCCTAAAT 57.739 45.455 0.00 0.00 0.00 1.40
4490 6814 5.393068 TCTACTCCCTCCGTTCCTAAATA 57.607 43.478 0.00 0.00 0.00 1.40
4491 6815 5.136105 TCTACTCCCTCCGTTCCTAAATAC 58.864 45.833 0.00 0.00 0.00 1.89
4492 6816 3.991683 ACTCCCTCCGTTCCTAAATACT 58.008 45.455 0.00 0.00 0.00 2.12
4493 6817 4.359996 ACTCCCTCCGTTCCTAAATACTT 58.640 43.478 0.00 0.00 0.00 2.24
4494 6818 4.161754 ACTCCCTCCGTTCCTAAATACTTG 59.838 45.833 0.00 0.00 0.00 3.16
4495 6819 4.098894 TCCCTCCGTTCCTAAATACTTGT 58.901 43.478 0.00 0.00 0.00 3.16
4496 6820 4.161001 TCCCTCCGTTCCTAAATACTTGTC 59.839 45.833 0.00 0.00 0.00 3.18
4497 6821 4.161754 CCCTCCGTTCCTAAATACTTGTCT 59.838 45.833 0.00 0.00 0.00 3.41
4498 6822 5.338137 CCCTCCGTTCCTAAATACTTGTCTT 60.338 44.000 0.00 0.00 0.00 3.01
4499 6823 6.171213 CCTCCGTTCCTAAATACTTGTCTTT 58.829 40.000 0.00 0.00 0.00 2.52
4500 6824 6.313164 CCTCCGTTCCTAAATACTTGTCTTTC 59.687 42.308 0.00 0.00 0.00 2.62
4501 6825 7.001099 TCCGTTCCTAAATACTTGTCTTTCT 57.999 36.000 0.00 0.00 0.00 2.52
4502 6826 8.125978 TCCGTTCCTAAATACTTGTCTTTCTA 57.874 34.615 0.00 0.00 0.00 2.10
4503 6827 8.248945 TCCGTTCCTAAATACTTGTCTTTCTAG 58.751 37.037 0.00 0.00 0.00 2.43
4504 6828 8.248945 CCGTTCCTAAATACTTGTCTTTCTAGA 58.751 37.037 0.00 0.00 0.00 2.43
4505 6829 9.291664 CGTTCCTAAATACTTGTCTTTCTAGAG 57.708 37.037 0.00 0.00 0.00 2.43
4515 6839 8.964476 ACTTGTCTTTCTAGAGATTTCAACAA 57.036 30.769 0.00 0.00 0.00 2.83
4516 6840 9.050601 ACTTGTCTTTCTAGAGATTTCAACAAG 57.949 33.333 18.42 18.42 32.73 3.16
4517 6841 8.964476 TTGTCTTTCTAGAGATTTCAACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
4518 6842 8.370493 TGTCTTTCTAGAGATTTCAACAAGTG 57.630 34.615 0.00 0.00 0.00 3.16
4519 6843 8.204160 TGTCTTTCTAGAGATTTCAACAAGTGA 58.796 33.333 0.00 0.00 0.00 3.41
4520 6844 8.491950 GTCTTTCTAGAGATTTCAACAAGTGAC 58.508 37.037 0.00 0.00 35.39 3.67
4521 6845 8.424918 TCTTTCTAGAGATTTCAACAAGTGACT 58.575 33.333 0.00 0.00 35.39 3.41
4522 6846 9.698309 CTTTCTAGAGATTTCAACAAGTGACTA 57.302 33.333 0.00 0.00 35.39 2.59
4523 6847 9.477484 TTTCTAGAGATTTCAACAAGTGACTAC 57.523 33.333 0.00 0.00 35.39 2.73
4524 6848 8.178313 TCTAGAGATTTCAACAAGTGACTACA 57.822 34.615 0.00 0.00 35.39 2.74
4525 6849 8.807118 TCTAGAGATTTCAACAAGTGACTACAT 58.193 33.333 0.00 0.00 35.39 2.29
4526 6850 9.429359 CTAGAGATTTCAACAAGTGACTACATT 57.571 33.333 0.00 0.00 35.39 2.71
4527 6851 8.316640 AGAGATTTCAACAAGTGACTACATTC 57.683 34.615 0.00 0.00 35.39 2.67
4528 6852 7.116948 AGAGATTTCAACAAGTGACTACATTCG 59.883 37.037 0.00 0.00 35.39 3.34
4529 6853 5.666969 TTTCAACAAGTGACTACATTCGG 57.333 39.130 0.00 0.00 35.39 4.30
4530 6854 3.064207 TCAACAAGTGACTACATTCGGC 58.936 45.455 0.00 0.00 0.00 5.54
4531 6855 1.710013 ACAAGTGACTACATTCGGCG 58.290 50.000 0.00 0.00 0.00 6.46
4532 6856 0.370273 CAAGTGACTACATTCGGCGC 59.630 55.000 0.00 0.00 0.00 6.53
4533 6857 0.037697 AAGTGACTACATTCGGCGCA 60.038 50.000 10.83 0.00 0.00 6.09
4534 6858 0.037697 AGTGACTACATTCGGCGCAA 60.038 50.000 10.83 0.00 0.00 4.85
4535 6859 0.793861 GTGACTACATTCGGCGCAAA 59.206 50.000 10.83 2.72 0.00 3.68
4536 6860 1.195900 GTGACTACATTCGGCGCAAAA 59.804 47.619 10.83 2.28 0.00 2.44
4537 6861 2.080693 TGACTACATTCGGCGCAAAAT 58.919 42.857 10.83 5.05 0.00 1.82
4538 6862 2.159585 TGACTACATTCGGCGCAAAATG 60.160 45.455 24.21 24.21 38.54 2.32
4539 6863 2.080693 ACTACATTCGGCGCAAAATGA 58.919 42.857 29.52 17.22 36.57 2.57
4540 6864 2.095853 ACTACATTCGGCGCAAAATGAG 59.904 45.455 29.52 23.88 36.57 2.90
4541 6865 0.881118 ACATTCGGCGCAAAATGAGT 59.119 45.000 29.52 13.43 36.57 3.41
4542 6866 1.261989 CATTCGGCGCAAAATGAGTG 58.738 50.000 22.49 9.97 35.35 3.51
4543 6867 1.135717 CATTCGGCGCAAAATGAGTGA 60.136 47.619 22.49 0.00 35.35 3.41
4544 6868 0.947960 TTCGGCGCAAAATGAGTGAA 59.052 45.000 10.83 0.00 0.00 3.18
4545 6869 1.164411 TCGGCGCAAAATGAGTGAAT 58.836 45.000 10.83 0.00 0.00 2.57
4546 6870 1.130373 TCGGCGCAAAATGAGTGAATC 59.870 47.619 10.83 0.00 0.00 2.52
4547 6871 1.131126 CGGCGCAAAATGAGTGAATCT 59.869 47.619 10.83 0.00 0.00 2.40
4548 6872 2.351418 CGGCGCAAAATGAGTGAATCTA 59.649 45.455 10.83 0.00 0.00 1.98
4549 6873 3.685058 GGCGCAAAATGAGTGAATCTAC 58.315 45.455 10.83 0.00 0.00 2.59
4550 6874 3.126858 GGCGCAAAATGAGTGAATCTACA 59.873 43.478 10.83 0.00 0.00 2.74
4551 6875 4.091424 GCGCAAAATGAGTGAATCTACAC 58.909 43.478 0.30 0.00 40.60 2.90
4590 6914 4.944048 CATACATCCGTATGTTGAGTCCA 58.056 43.478 0.00 0.00 46.70 4.02
4591 6915 5.541845 CATACATCCGTATGTTGAGTCCAT 58.458 41.667 0.00 0.00 46.70 3.41
4592 6916 4.487714 ACATCCGTATGTTGAGTCCATT 57.512 40.909 0.00 0.00 44.07 3.16
4593 6917 4.843728 ACATCCGTATGTTGAGTCCATTT 58.156 39.130 0.00 0.00 44.07 2.32
4594 6918 4.635765 ACATCCGTATGTTGAGTCCATTTG 59.364 41.667 0.00 0.00 44.07 2.32
4595 6919 4.545208 TCCGTATGTTGAGTCCATTTGA 57.455 40.909 0.00 0.00 0.00 2.69
4596 6920 4.900684 TCCGTATGTTGAGTCCATTTGAA 58.099 39.130 0.00 0.00 0.00 2.69
4597 6921 5.309638 TCCGTATGTTGAGTCCATTTGAAA 58.690 37.500 0.00 0.00 0.00 2.69
4598 6922 5.943416 TCCGTATGTTGAGTCCATTTGAAAT 59.057 36.000 0.00 0.00 0.00 2.17
4599 6923 6.029607 CCGTATGTTGAGTCCATTTGAAATG 58.970 40.000 10.84 10.84 0.00 2.32
4600 6924 5.512788 CGTATGTTGAGTCCATTTGAAATGC 59.487 40.000 12.26 0.23 0.00 3.56
4601 6925 4.255833 TGTTGAGTCCATTTGAAATGCC 57.744 40.909 12.26 5.23 0.00 4.40
4602 6926 3.896888 TGTTGAGTCCATTTGAAATGCCT 59.103 39.130 12.26 9.70 0.00 4.75
4603 6927 5.076182 TGTTGAGTCCATTTGAAATGCCTA 58.924 37.500 12.26 0.00 0.00 3.93
4604 6928 5.183713 TGTTGAGTCCATTTGAAATGCCTAG 59.816 40.000 12.26 0.00 0.00 3.02
4605 6929 5.178096 TGAGTCCATTTGAAATGCCTAGA 57.822 39.130 12.26 1.83 0.00 2.43
4606 6930 5.569355 TGAGTCCATTTGAAATGCCTAGAA 58.431 37.500 12.26 0.00 0.00 2.10
4607 6931 6.009589 TGAGTCCATTTGAAATGCCTAGAAA 58.990 36.000 12.26 0.00 0.00 2.52
4608 6932 6.151648 TGAGTCCATTTGAAATGCCTAGAAAG 59.848 38.462 12.26 0.00 0.00 2.62
4609 6933 6.248433 AGTCCATTTGAAATGCCTAGAAAGA 58.752 36.000 12.26 0.00 0.00 2.52
4610 6934 6.151817 AGTCCATTTGAAATGCCTAGAAAGAC 59.848 38.462 12.26 10.86 0.00 3.01
4611 6935 6.009589 TCCATTTGAAATGCCTAGAAAGACA 58.990 36.000 12.26 0.00 0.00 3.41
4612 6936 6.493115 TCCATTTGAAATGCCTAGAAAGACAA 59.507 34.615 12.26 0.00 0.00 3.18
4613 6937 6.810182 CCATTTGAAATGCCTAGAAAGACAAG 59.190 38.462 12.26 0.00 0.00 3.16
4614 6938 6.959639 TTTGAAATGCCTAGAAAGACAAGT 57.040 33.333 0.00 0.00 0.00 3.16
4615 6939 8.514594 CATTTGAAATGCCTAGAAAGACAAGTA 58.485 33.333 4.82 0.00 0.00 2.24
4616 6940 8.635765 TTTGAAATGCCTAGAAAGACAAGTAT 57.364 30.769 0.00 0.00 0.00 2.12
4617 6941 8.635765 TTGAAATGCCTAGAAAGACAAGTATT 57.364 30.769 0.00 0.00 0.00 1.89
4618 6942 8.635765 TGAAATGCCTAGAAAGACAAGTATTT 57.364 30.769 0.00 0.00 0.00 1.40
4619 6943 8.514594 TGAAATGCCTAGAAAGACAAGTATTTG 58.485 33.333 0.00 0.00 40.24 2.32
4620 6944 7.396540 AATGCCTAGAAAGACAAGTATTTGG 57.603 36.000 2.81 0.00 38.66 3.28
4621 6945 5.253330 TGCCTAGAAAGACAAGTATTTGGG 58.747 41.667 2.81 0.00 38.66 4.12
4622 6946 5.013704 TGCCTAGAAAGACAAGTATTTGGGA 59.986 40.000 2.81 0.00 38.66 4.37
4623 6947 5.944007 GCCTAGAAAGACAAGTATTTGGGAA 59.056 40.000 2.81 0.00 38.66 3.97
4624 6948 6.127980 GCCTAGAAAGACAAGTATTTGGGAAC 60.128 42.308 2.81 0.00 38.66 3.62
4625 6949 5.941948 AGAAAGACAAGTATTTGGGAACG 57.058 39.130 2.81 0.00 38.66 3.95
4626 6950 4.760204 AGAAAGACAAGTATTTGGGAACGG 59.240 41.667 2.81 0.00 38.66 4.44
4627 6951 4.360951 AAGACAAGTATTTGGGAACGGA 57.639 40.909 2.81 0.00 38.66 4.69
4628 6952 3.939066 AGACAAGTATTTGGGAACGGAG 58.061 45.455 2.81 0.00 38.66 4.63
4629 6953 3.007635 GACAAGTATTTGGGAACGGAGG 58.992 50.000 2.81 0.00 38.66 4.30
4630 6954 2.290705 ACAAGTATTTGGGAACGGAGGG 60.291 50.000 2.81 0.00 38.66 4.30
4631 6955 1.961133 AGTATTTGGGAACGGAGGGA 58.039 50.000 0.00 0.00 0.00 4.20
4632 6956 1.838077 AGTATTTGGGAACGGAGGGAG 59.162 52.381 0.00 0.00 0.00 4.30
4668 6993 5.061853 CCCTCCATTCTGTTGATGTATCTG 58.938 45.833 0.00 0.00 0.00 2.90
4687 7012 1.621317 TGTTGCAGATTCTGACCGGTA 59.379 47.619 17.87 0.00 32.44 4.02
4766 7091 1.495584 GGCTGAAAGTCGAACACGCA 61.496 55.000 0.00 0.00 35.30 5.24
4831 7156 2.036089 GGTTTCCGTGTTCTCACTCTCT 59.964 50.000 0.00 0.00 41.89 3.10
4843 7168 0.727457 CACTCTCTGTCGTCTGTGCG 60.727 60.000 0.00 0.00 0.00 5.34
4864 7189 4.334443 CGTTCATAATGCTTTCCAGTTCG 58.666 43.478 0.00 0.00 0.00 3.95
4911 7236 2.066340 TGGAGTCGCCAAACCAGAT 58.934 52.632 0.00 0.00 45.87 2.90
4963 7288 5.532032 TCATCCAATGACATATGTTGCGAAT 59.468 36.000 10.30 0.00 33.59 3.34
4994 7319 3.554337 GGTGATCCCAGACGCGTAATTAT 60.554 47.826 13.97 2.02 0.00 1.28
4995 7320 3.428870 GTGATCCCAGACGCGTAATTATG 59.571 47.826 13.97 6.32 0.00 1.90
5130 7458 3.120511 GCTAGTGTGTAAAGCTGTCTTGC 60.121 47.826 0.00 0.00 33.40 4.01
5160 7495 3.324846 TGTGTCTGAAGTAACCAGAGCAT 59.675 43.478 0.00 0.00 40.88 3.79
5178 7522 0.108615 ATGGAAAGAGTCGACTGGCG 60.109 55.000 25.58 0.00 42.69 5.69
5199 7543 3.318017 GTTGCTCGTCTCTTGTACATGT 58.682 45.455 2.69 2.69 0.00 3.21
5200 7544 4.482386 GTTGCTCGTCTCTTGTACATGTA 58.518 43.478 0.08 0.08 0.00 2.29
5201 7545 4.092771 TGCTCGTCTCTTGTACATGTAC 57.907 45.455 25.99 25.99 36.63 2.90
5241 7590 1.448189 TAAATTCCCGGGTGTCGCG 60.448 57.895 22.86 0.00 39.48 5.87
5271 7620 7.962441 ACCCTTCAAAAATGTATAGCAACTTT 58.038 30.769 0.00 0.00 0.00 2.66
5280 7629 7.447374 AATGTATAGCAACTTTAGCAACACA 57.553 32.000 0.00 0.00 0.00 3.72
5331 7680 4.505808 TGGTTCGTCAGTGTAAAGTTCAA 58.494 39.130 0.00 0.00 0.00 2.69
5358 7870 6.620877 ATGTATGTCCCTGTTCTTGTAGAA 57.379 37.500 0.00 0.00 0.00 2.10
5423 7936 5.183904 GCAAGACTGGGAAATGTGAACTAAT 59.816 40.000 0.00 0.00 0.00 1.73
5439 7952 7.041167 TGTGAACTAATGAAGTGGATCTTTGTG 60.041 37.037 0.00 0.00 38.88 3.33
5440 7953 6.998074 TGAACTAATGAAGTGGATCTTTGTGT 59.002 34.615 0.00 0.00 38.88 3.72
5464 7977 5.630121 ACATGGAGTAAATTTCCACTGTGA 58.370 37.500 9.86 0.00 46.85 3.58
5492 8005 3.383185 TGATGGGAAAACAACACTTGACC 59.617 43.478 0.00 0.00 0.00 4.02
5496 8009 2.681344 GGAAAACAACACTTGACCTCGT 59.319 45.455 0.00 0.00 0.00 4.18
5498 8011 4.260497 GGAAAACAACACTTGACCTCGTAC 60.260 45.833 0.00 0.00 0.00 3.67
5502 8015 2.631418 ACACTTGACCTCGTACGATG 57.369 50.000 19.87 18.55 0.00 3.84
5506 8019 2.163815 ACTTGACCTCGTACGATGGAAG 59.836 50.000 28.78 25.10 0.00 3.46
5530 8043 7.009568 GCATAATGCTAATGTATACAGGAGC 57.990 40.000 24.79 24.79 40.96 4.70
5542 8055 5.414454 TGTATACAGGAGCAAATTTCCACAC 59.586 40.000 0.08 0.00 37.18 3.82
5570 8083 2.058675 GGGTGGATCATAGGACCCG 58.941 63.158 0.00 0.00 38.86 5.28
5577 8090 2.039084 GGATCATAGGACCCGCAGAAAT 59.961 50.000 0.00 0.00 0.00 2.17
5597 8110 7.496920 CAGAAATTGCTAATGACTCCAGACATA 59.503 37.037 0.00 0.00 30.75 2.29
5601 8114 4.101430 TGCTAATGACTCCAGACATATGCA 59.899 41.667 1.58 11.64 36.81 3.96
5602 8115 5.059161 GCTAATGACTCCAGACATATGCAA 58.941 41.667 1.58 0.00 33.16 4.08
5615 8168 7.408910 CAGACATATGCAACAACGAATTATCA 58.591 34.615 1.58 0.00 0.00 2.15
5655 8208 4.769345 AAAAGTCCAATGCCAAAAAGGA 57.231 36.364 0.00 0.00 41.22 3.36
5657 8210 4.541973 AAGTCCAATGCCAAAAAGGATC 57.458 40.909 0.00 0.00 41.22 3.36
5658 8211 3.509442 AGTCCAATGCCAAAAAGGATCA 58.491 40.909 0.00 0.00 41.22 2.92
5661 8214 3.645212 TCCAATGCCAAAAAGGATCAACA 59.355 39.130 0.00 0.00 41.22 3.33
5662 8215 3.747529 CCAATGCCAAAAAGGATCAACAC 59.252 43.478 0.00 0.00 41.22 3.32
5663 8216 4.378774 CAATGCCAAAAAGGATCAACACA 58.621 39.130 0.00 0.00 41.22 3.72
5664 8217 4.895668 ATGCCAAAAAGGATCAACACAT 57.104 36.364 0.00 0.00 41.22 3.21
5665 8218 3.992643 TGCCAAAAAGGATCAACACATG 58.007 40.909 0.00 0.00 41.22 3.21
5666 8219 2.738314 GCCAAAAAGGATCAACACATGC 59.262 45.455 0.00 0.00 41.22 4.06
5667 8220 3.328505 CCAAAAAGGATCAACACATGCC 58.671 45.455 0.00 0.00 41.22 4.40
5668 8221 2.988493 CAAAAAGGATCAACACATGCCG 59.012 45.455 0.00 0.00 0.00 5.69
5669 8222 0.527565 AAAGGATCAACACATGCCGC 59.472 50.000 0.00 0.00 0.00 6.53
5670 8223 0.608856 AAGGATCAACACATGCCGCA 60.609 50.000 0.00 0.00 0.00 5.69
5671 8224 0.608856 AGGATCAACACATGCCGCAA 60.609 50.000 0.00 0.00 0.00 4.85
5672 8225 0.243365 GGATCAACACATGCCGCAAA 59.757 50.000 0.00 0.00 0.00 3.68
5673 8226 1.336702 GGATCAACACATGCCGCAAAA 60.337 47.619 0.00 0.00 0.00 2.44
5674 8227 2.402305 GATCAACACATGCCGCAAAAA 58.598 42.857 0.00 0.00 0.00 1.94
5705 8258 8.592809 ACATCCCAATTACAAAAGCTTCAAATA 58.407 29.630 0.00 0.00 0.00 1.40
5722 8275 6.399639 TCAAATATGCACATCATCAGCATT 57.600 33.333 4.36 0.00 45.98 3.56
5756 8310 5.293814 TCACGAACTTTTTGTCAAATCCGTA 59.706 36.000 0.00 0.00 0.00 4.02
5806 8360 9.519905 CATTTCTTTTTAAATCTGCGAACAATG 57.480 29.630 0.00 0.00 0.00 2.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 5.544176 ACATAGATGTTCCTACCCACTATGG 59.456 44.000 0.81 0.00 37.90 2.74
144 146 1.020437 CGGACGGAGGGAGTAACTAC 58.980 60.000 0.00 0.00 0.00 2.73
180 182 3.354948 AGGAACATGCTTGTGATGCTA 57.645 42.857 5.94 0.00 35.83 3.49
197 199 1.567175 AGCGGGGCCTTATAAAAAGGA 59.433 47.619 0.84 0.00 39.81 3.36
200 202 2.498078 CCAAAGCGGGGCCTTATAAAAA 59.502 45.455 0.84 0.00 0.00 1.94
255 287 4.513000 CCAACAACAATGGTTTTCAACG 57.487 40.909 0.00 0.00 34.21 4.10
265 297 2.036217 AGTCATGGCACCAACAACAATG 59.964 45.455 0.00 0.00 0.00 2.82
284 316 8.726988 ACGCATGTAGTGTATTAATTTTTCAGT 58.273 29.630 0.00 0.00 39.69 3.41
318 350 1.679153 CTCACATGCATGCAGCCAATA 59.321 47.619 26.69 8.16 44.83 1.90
339 371 0.321564 TTCCACTCCCAATGCACTCG 60.322 55.000 0.00 0.00 0.00 4.18
440 472 2.330216 AGAGAGGTGCTTGTGGTACTT 58.670 47.619 0.00 0.00 0.00 2.24
497 531 7.116519 GGAACTTAGAAGTAACATCACACACTC 59.883 40.741 0.00 0.00 38.57 3.51
543 577 3.850010 GCTCGCAAAAGTTGGAAGTTCTC 60.850 47.826 2.25 0.00 0.00 2.87
547 581 0.307760 CGCTCGCAAAAGTTGGAAGT 59.692 50.000 0.00 0.00 0.00 3.01
548 582 0.998727 GCGCTCGCAAAAGTTGGAAG 60.999 55.000 9.59 0.00 41.49 3.46
549 583 1.008995 GCGCTCGCAAAAGTTGGAA 60.009 52.632 9.59 0.00 41.49 3.53
550 584 2.637025 GCGCTCGCAAAAGTTGGA 59.363 55.556 9.59 0.00 41.49 3.53
560 594 1.734885 CTTGATGTAAATGCGCTCGC 58.265 50.000 9.73 7.38 42.35 5.03
561 595 1.062440 TGCTTGATGTAAATGCGCTCG 59.938 47.619 9.73 0.00 0.00 5.03
562 596 2.830772 TGCTTGATGTAAATGCGCTC 57.169 45.000 9.73 0.00 0.00 5.03
563 597 2.489329 AGTTGCTTGATGTAAATGCGCT 59.511 40.909 9.73 0.00 0.00 5.92
564 598 2.867429 AGTTGCTTGATGTAAATGCGC 58.133 42.857 0.00 0.00 0.00 6.09
565 599 5.827568 AAAAGTTGCTTGATGTAAATGCG 57.172 34.783 0.00 0.00 0.00 4.73
566 600 6.847289 CACAAAAAGTTGCTTGATGTAAATGC 59.153 34.615 5.24 0.00 38.39 3.56
567 601 8.129161 TCACAAAAAGTTGCTTGATGTAAATG 57.871 30.769 5.24 0.00 38.39 2.32
568 602 7.042523 GCTCACAAAAAGTTGCTTGATGTAAAT 60.043 33.333 5.24 0.00 38.39 1.40
569 603 6.255453 GCTCACAAAAAGTTGCTTGATGTAAA 59.745 34.615 5.24 0.00 38.39 2.01
570 604 5.748152 GCTCACAAAAAGTTGCTTGATGTAA 59.252 36.000 5.24 0.00 38.39 2.41
571 605 5.163571 TGCTCACAAAAAGTTGCTTGATGTA 60.164 36.000 5.24 0.00 38.39 2.29
572 606 4.114794 GCTCACAAAAAGTTGCTTGATGT 58.885 39.130 5.24 0.00 38.39 3.06
573 607 4.026310 GTGCTCACAAAAAGTTGCTTGATG 60.026 41.667 5.24 1.65 38.39 3.07
574 608 4.114794 GTGCTCACAAAAAGTTGCTTGAT 58.885 39.130 5.24 0.00 38.39 2.57
575 609 3.056962 TGTGCTCACAAAAAGTTGCTTGA 60.057 39.130 0.00 0.00 38.56 3.02
576 610 3.252400 TGTGCTCACAAAAAGTTGCTTG 58.748 40.909 0.00 0.00 38.56 4.01
577 611 3.591196 TGTGCTCACAAAAAGTTGCTT 57.409 38.095 0.00 0.00 38.56 3.91
578 612 3.806625 ATGTGCTCACAAAAAGTTGCT 57.193 38.095 6.81 0.00 45.41 3.91
579 613 4.863152 AAATGTGCTCACAAAAAGTTGC 57.137 36.364 6.81 0.00 45.41 4.17
580 614 7.063780 AGAGAAAAATGTGCTCACAAAAAGTTG 59.936 33.333 6.81 0.00 45.41 3.16
581 615 7.099120 AGAGAAAAATGTGCTCACAAAAAGTT 58.901 30.769 6.81 0.00 45.41 2.66
582 616 6.633856 AGAGAAAAATGTGCTCACAAAAAGT 58.366 32.000 6.81 0.00 45.41 2.66
583 617 6.753279 TGAGAGAAAAATGTGCTCACAAAAAG 59.247 34.615 6.81 0.00 45.41 2.27
584 618 6.629128 TGAGAGAAAAATGTGCTCACAAAAA 58.371 32.000 6.81 0.00 45.41 1.94
585 619 6.206395 TGAGAGAAAAATGTGCTCACAAAA 57.794 33.333 6.81 0.00 45.41 2.44
586 620 5.833406 TGAGAGAAAAATGTGCTCACAAA 57.167 34.783 6.81 0.00 45.41 2.83
587 621 5.833406 TTGAGAGAAAAATGTGCTCACAA 57.167 34.783 6.81 0.00 45.41 3.33
588 622 5.532032 TCATTGAGAGAAAAATGTGCTCACA 59.468 36.000 5.08 5.08 46.44 3.58
589 623 6.005583 TCATTGAGAGAAAAATGTGCTCAC 57.994 37.500 0.00 0.00 35.54 3.51
590 624 6.829229 ATCATTGAGAGAAAAATGTGCTCA 57.171 33.333 0.00 0.00 35.66 4.26
591 625 9.234384 CAATATCATTGAGAGAAAAATGTGCTC 57.766 33.333 0.00 0.00 35.66 4.26
687 726 3.718956 AGTTAATTCAGGATGGAGGGAGG 59.281 47.826 0.00 0.00 36.16 4.30
695 734 3.689161 TCAACGGCAGTTAATTCAGGATG 59.311 43.478 0.75 0.00 38.79 3.51
696 735 3.950397 TCAACGGCAGTTAATTCAGGAT 58.050 40.909 0.75 0.00 38.79 3.24
697 736 3.410631 TCAACGGCAGTTAATTCAGGA 57.589 42.857 0.75 0.00 38.79 3.86
710 749 3.435327 TGACATACACTCATTTCAACGGC 59.565 43.478 0.00 0.00 0.00 5.68
740 1039 4.040584 AGTGGGTTCTCTTTGTCTTCTACC 59.959 45.833 0.00 0.00 0.00 3.18
748 1047 1.143073 GGTCCAGTGGGTTCTCTTTGT 59.857 52.381 9.92 0.00 34.93 2.83
760 1059 4.464008 ACATATTATGCTTGGGTCCAGTG 58.536 43.478 3.52 0.00 0.00 3.66
769 1068 8.383619 GCTCGGACTAATTACATATTATGCTTG 58.616 37.037 3.52 0.00 0.00 4.01
779 1078 6.456501 GGATACAAGCTCGGACTAATTACAT 58.543 40.000 0.00 0.00 0.00 2.29
806 1105 4.082125 ACGGAGAAAATGGAGCTCAATTT 58.918 39.130 21.32 21.32 31.67 1.82
817 1116 5.143916 CGTAGATTTCCACGGAGAAAATG 57.856 43.478 6.26 0.00 39.11 2.32
836 1135 5.979993 TGCCAGTGAATAAATAACTCCGTA 58.020 37.500 0.00 0.00 0.00 4.02
838 1137 5.354234 ACTTGCCAGTGAATAAATAACTCCG 59.646 40.000 0.00 0.00 0.00 4.63
839 1138 6.759497 ACTTGCCAGTGAATAAATAACTCC 57.241 37.500 0.00 0.00 0.00 3.85
1058 1369 2.358369 ACGCCTGAGAGACGACGA 60.358 61.111 0.00 0.00 0.00 4.20
1261 1572 2.152699 CGGCGAGCTCGTACTGTTG 61.153 63.158 34.46 14.35 42.22 3.33
1262 1573 2.178521 CGGCGAGCTCGTACTGTT 59.821 61.111 34.46 0.00 42.22 3.16
1263 1574 3.036783 GACGGCGAGCTCGTACTGT 62.037 63.158 34.46 28.28 41.22 3.55
1264 1575 2.277373 GACGGCGAGCTCGTACTG 60.277 66.667 34.46 25.48 41.22 2.74
1265 1576 3.862402 CGACGGCGAGCTCGTACT 61.862 66.667 34.46 18.21 41.22 2.73
1266 1577 3.857854 TCGACGGCGAGCTCGTAC 61.858 66.667 34.46 25.99 42.51 3.67
1278 1589 3.114647 CTCCTCGGCCTTCTCGACG 62.115 68.421 0.00 0.00 32.86 5.12
1344 1655 5.541953 ATCATCTAGAGCAACTGCATGTA 57.458 39.130 4.22 0.00 45.16 2.29
1397 1713 3.891977 TGCATAAGTTAACCAAGCACCAA 59.108 39.130 0.88 0.00 0.00 3.67
1430 1759 5.126707 AGCTTAATTACGATACCTATCCCCG 59.873 44.000 0.00 0.00 0.00 5.73
1435 1764 6.818644 CCATGCAGCTTAATTACGATACCTAT 59.181 38.462 0.00 0.00 0.00 2.57
1439 1769 4.755123 ACCCATGCAGCTTAATTACGATAC 59.245 41.667 0.00 0.00 0.00 2.24
1477 1807 6.889177 TGTAGGACCATTTTCAGCATTTGATA 59.111 34.615 0.00 0.00 35.27 2.15
1482 1812 6.835488 ACATATGTAGGACCATTTTCAGCATT 59.165 34.615 6.56 0.00 0.00 3.56
1495 1825 2.224548 GGCCCTGGAACATATGTAGGAC 60.225 54.545 20.40 11.58 38.20 3.85
1520 1850 8.952278 TCACTAGAAGAGAAGATCAACTAGAAC 58.048 37.037 0.00 0.00 38.33 3.01
1593 1925 3.429410 CCATCAGCGTCTCACACATCTAA 60.429 47.826 0.00 0.00 0.00 2.10
1656 1988 7.990917 TGACTAAGATTTAGCAACAACAACAA 58.009 30.769 0.00 0.00 0.00 2.83
1658 1990 8.507249 AGATGACTAAGATTTAGCAACAACAAC 58.493 33.333 0.00 0.00 0.00 3.32
1659 1991 8.621532 AGATGACTAAGATTTAGCAACAACAA 57.378 30.769 0.00 0.00 0.00 2.83
1660 1992 9.719355 TTAGATGACTAAGATTTAGCAACAACA 57.281 29.630 0.00 0.00 34.21 3.33
1701 2033 2.094545 CACACAGCAATTTTAGGCTCCC 60.095 50.000 0.00 0.00 38.56 4.30
1815 3186 4.618912 CAGAGTCACAAGTAGAATGACACG 59.381 45.833 6.40 0.00 44.26 4.49
1859 3242 5.300286 GCACAGGCAATTAGGTTAGAATCAT 59.700 40.000 0.00 0.00 40.72 2.45
1986 3369 9.878599 GTCAACATGGCAATTGTAAGTATATAC 57.121 33.333 7.40 4.60 0.00 1.47
2053 3437 6.064846 ACAATGTGTGATCTGTTTCAGAAC 57.935 37.500 3.58 2.24 44.04 3.01
2054 3438 6.992123 AGTACAATGTGTGATCTGTTTCAGAA 59.008 34.615 0.00 0.00 44.04 3.02
2236 3623 4.171005 CAGAATACAAAGGCAATGCAGTG 58.829 43.478 10.38 10.38 0.00 3.66
2258 3645 8.028938 TGCTTTATATGAAACAAAGAGAAAGGC 58.971 33.333 0.08 0.00 32.20 4.35
2276 3686 5.129815 ACTGAAATCCTACGGGTGCTTTATA 59.870 40.000 0.00 0.00 0.00 0.98
2277 3687 4.080526 ACTGAAATCCTACGGGTGCTTTAT 60.081 41.667 0.00 0.00 0.00 1.40
2281 3691 1.276622 ACTGAAATCCTACGGGTGCT 58.723 50.000 0.00 0.00 0.00 4.40
2282 3692 2.109425 AACTGAAATCCTACGGGTGC 57.891 50.000 0.00 0.00 0.00 5.01
2283 3693 5.064707 CACATTAACTGAAATCCTACGGGTG 59.935 44.000 0.00 0.00 0.00 4.61
2284 3694 5.183228 CACATTAACTGAAATCCTACGGGT 58.817 41.667 0.00 0.00 0.00 5.28
2285 3695 5.183228 ACACATTAACTGAAATCCTACGGG 58.817 41.667 0.00 0.00 0.00 5.28
2286 3696 6.106673 AGACACATTAACTGAAATCCTACGG 58.893 40.000 0.00 0.00 0.00 4.02
2287 3697 7.222224 GGTAGACACATTAACTGAAATCCTACG 59.778 40.741 0.00 0.00 0.00 3.51
2288 3698 7.222224 CGGTAGACACATTAACTGAAATCCTAC 59.778 40.741 0.00 0.00 0.00 3.18
2289 3699 7.262772 CGGTAGACACATTAACTGAAATCCTA 58.737 38.462 0.00 0.00 0.00 2.94
2290 3700 6.106673 CGGTAGACACATTAACTGAAATCCT 58.893 40.000 0.00 0.00 0.00 3.24
2291 3701 5.220605 GCGGTAGACACATTAACTGAAATCC 60.221 44.000 0.00 0.00 0.00 3.01
2292 3702 5.581085 AGCGGTAGACACATTAACTGAAATC 59.419 40.000 0.00 0.00 0.00 2.17
2293 3703 5.351465 CAGCGGTAGACACATTAACTGAAAT 59.649 40.000 0.00 0.00 0.00 2.17
2294 3704 4.688879 CAGCGGTAGACACATTAACTGAAA 59.311 41.667 0.00 0.00 0.00 2.69
2295 3705 4.242475 CAGCGGTAGACACATTAACTGAA 58.758 43.478 0.00 0.00 0.00 3.02
2296 3706 3.257375 ACAGCGGTAGACACATTAACTGA 59.743 43.478 0.00 0.00 0.00 3.41
2297 3707 3.585862 ACAGCGGTAGACACATTAACTG 58.414 45.455 0.00 0.00 0.00 3.16
2298 3708 3.955650 ACAGCGGTAGACACATTAACT 57.044 42.857 0.00 0.00 0.00 2.24
2299 3709 6.657836 AAATACAGCGGTAGACACATTAAC 57.342 37.500 2.53 0.00 31.88 2.01
2300 3710 6.982141 CCTAAATACAGCGGTAGACACATTAA 59.018 38.462 2.53 0.00 31.88 1.40
2472 3882 4.828939 TGGCAATGTCAGAAGAAGAATGTT 59.171 37.500 0.00 0.00 0.00 2.71
2524 3941 4.523173 CGGAGGGAGTATATTAAGAGCACA 59.477 45.833 0.00 0.00 0.00 4.57
2537 3954 4.355549 TCTATTTTGGAACGGAGGGAGTA 58.644 43.478 0.00 0.00 0.00 2.59
2538 3955 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
2539 3956 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
2540 3957 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
2541 3958 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
2542 3959 4.770795 AGTCATCTATTTTGGAACGGAGG 58.229 43.478 0.00 0.00 0.00 4.30
2543 3960 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
2544 3961 5.414789 TGAGTCATCTATTTTGGAACGGA 57.585 39.130 0.00 0.00 0.00 4.69
2545 3962 5.643777 AGTTGAGTCATCTATTTTGGAACGG 59.356 40.000 1.70 0.00 0.00 4.44
2546 3963 6.727824 AGTTGAGTCATCTATTTTGGAACG 57.272 37.500 1.70 0.00 0.00 3.95
2547 3964 8.352942 ACAAAGTTGAGTCATCTATTTTGGAAC 58.647 33.333 14.35 0.00 40.00 3.62
2548 3965 8.463930 ACAAAGTTGAGTCATCTATTTTGGAA 57.536 30.769 14.35 0.00 40.00 3.53
2549 3966 8.999431 GTACAAAGTTGAGTCATCTATTTTGGA 58.001 33.333 14.35 6.88 40.00 3.53
2550 3967 9.003658 AGTACAAAGTTGAGTCATCTATTTTGG 57.996 33.333 14.35 0.00 40.00 3.28
2589 4006 9.003658 CCAAAATAGATGACTCAACTTTGTACT 57.996 33.333 0.00 0.00 0.00 2.73
2590 4007 8.999431 TCCAAAATAGATGACTCAACTTTGTAC 58.001 33.333 0.00 0.00 0.00 2.90
2591 4008 9.567776 TTCCAAAATAGATGACTCAACTTTGTA 57.432 29.630 0.00 0.00 0.00 2.41
2592 4009 8.352942 GTTCCAAAATAGATGACTCAACTTTGT 58.647 33.333 0.00 0.00 0.00 2.83
2593 4010 7.535258 CGTTCCAAAATAGATGACTCAACTTTG 59.465 37.037 0.00 0.00 0.00 2.77
2594 4011 7.308589 CCGTTCCAAAATAGATGACTCAACTTT 60.309 37.037 0.00 0.00 0.00 2.66
2595 4012 6.149474 CCGTTCCAAAATAGATGACTCAACTT 59.851 38.462 0.00 0.00 0.00 2.66
2596 4013 5.643777 CCGTTCCAAAATAGATGACTCAACT 59.356 40.000 0.00 0.00 0.00 3.16
2597 4014 5.642063 TCCGTTCCAAAATAGATGACTCAAC 59.358 40.000 0.00 0.00 0.00 3.18
2598 4015 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
2599 4016 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
2600 4017 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
2601 4018 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
2602 4019 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
2603 4020 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
2604 4021 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
2605 4022 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
2606 4023 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
2607 4024 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
2608 4025 4.355549 TCTACTCCCTCCGTTCCAAAATA 58.644 43.478 0.00 0.00 0.00 1.40
2609 4026 3.178865 TCTACTCCCTCCGTTCCAAAAT 58.821 45.455 0.00 0.00 0.00 1.82
2610 4027 2.612000 TCTACTCCCTCCGTTCCAAAA 58.388 47.619 0.00 0.00 0.00 2.44
2611 4028 2.301009 GTTCTACTCCCTCCGTTCCAAA 59.699 50.000 0.00 0.00 0.00 3.28
2612 4029 1.897802 GTTCTACTCCCTCCGTTCCAA 59.102 52.381 0.00 0.00 0.00 3.53
2613 4030 1.203087 TGTTCTACTCCCTCCGTTCCA 60.203 52.381 0.00 0.00 0.00 3.53
2614 4031 1.553706 TGTTCTACTCCCTCCGTTCC 58.446 55.000 0.00 0.00 0.00 3.62
2615 4032 3.672767 TTTGTTCTACTCCCTCCGTTC 57.327 47.619 0.00 0.00 0.00 3.95
2616 4033 3.135167 TGTTTTGTTCTACTCCCTCCGTT 59.865 43.478 0.00 0.00 0.00 4.44
2617 4034 2.701951 TGTTTTGTTCTACTCCCTCCGT 59.298 45.455 0.00 0.00 0.00 4.69
2618 4035 3.396260 TGTTTTGTTCTACTCCCTCCG 57.604 47.619 0.00 0.00 0.00 4.63
2619 4036 7.754851 TTATTTGTTTTGTTCTACTCCCTCC 57.245 36.000 0.00 0.00 0.00 4.30
2620 4037 9.232473 AGATTATTTGTTTTGTTCTACTCCCTC 57.768 33.333 0.00 0.00 0.00 4.30
2706 4126 8.261492 ACTCAACTTATGCAATCTGTAGAAAG 57.739 34.615 0.00 0.00 0.00 2.62
2733 4153 7.657761 ACCAACAAAGAGATACTACAAGACTTG 59.342 37.037 13.77 13.77 0.00 3.16
2779 4199 8.816894 AGGGGATCATAATATATATAACCGCAG 58.183 37.037 0.00 0.00 0.00 5.18
2826 4246 7.206981 ACATCCATCAACTTTTACTTCACAG 57.793 36.000 0.00 0.00 0.00 3.66
2939 4361 4.687483 CCTCTTGTGCTGCCAAAATAAAAG 59.313 41.667 0.00 0.00 0.00 2.27
3101 4523 1.272872 ACTGAATCAGGGCTGCCAATT 60.273 47.619 22.05 15.92 35.51 2.32
3401 4823 8.792633 CAGAATAAAATGAAAGGGTACAAGTCA 58.207 33.333 0.00 0.00 0.00 3.41
3506 4928 4.280677 TCTGAAAAATTTACCAGTGGCCTG 59.719 41.667 9.78 0.00 38.50 4.85
3566 4988 3.185246 AGGAAGCATTACGGACAGATG 57.815 47.619 0.00 0.00 30.56 2.90
4076 6240 1.771255 GTAAGGACCATGCCAGGAGAT 59.229 52.381 0.00 0.00 0.00 2.75
4085 6249 4.653341 AGAAGGAGATCTGTAAGGACCATG 59.347 45.833 0.00 0.00 0.00 3.66
4149 6314 0.732571 TTCTTGCGCCAATCGAATCC 59.267 50.000 4.18 0.00 41.67 3.01
4150 6315 2.542766 TTTCTTGCGCCAATCGAATC 57.457 45.000 4.18 0.00 41.67 2.52
4176 6342 8.588290 AGAGAGTTACAGAGTACAGAATGAAT 57.412 34.615 0.00 0.00 39.69 2.57
4213 6379 3.185880 ACAGGAGGGGCGTGTATATAT 57.814 47.619 0.00 0.00 43.29 0.86
4222 6544 0.958876 GGTTAACAACAGGAGGGGCG 60.959 60.000 8.10 0.00 0.00 6.13
4226 6548 4.283722 AGACTGTAGGTTAACAACAGGAGG 59.716 45.833 29.20 15.36 43.91 4.30
4230 6552 9.490379 AAAGAATAGACTGTAGGTTAACAACAG 57.510 33.333 26.51 26.51 44.89 3.16
4264 6588 8.503458 ACATCTGTTTATTTTGGAGAGATGAG 57.497 34.615 14.22 0.00 38.28 2.90
4336 6660 2.542020 TCACAACTCGCATTCTTGGA 57.458 45.000 0.00 0.00 0.00 3.53
4473 6797 4.098894 ACAAGTATTTAGGAACGGAGGGA 58.901 43.478 0.00 0.00 0.00 4.20
4474 6798 4.161754 AGACAAGTATTTAGGAACGGAGGG 59.838 45.833 0.00 0.00 0.00 4.30
4475 6799 5.340439 AGACAAGTATTTAGGAACGGAGG 57.660 43.478 0.00 0.00 0.00 4.30
4476 6800 7.097834 AGAAAGACAAGTATTTAGGAACGGAG 58.902 38.462 0.00 0.00 0.00 4.63
4477 6801 7.001099 AGAAAGACAAGTATTTAGGAACGGA 57.999 36.000 0.00 0.00 0.00 4.69
4478 6802 8.248945 TCTAGAAAGACAAGTATTTAGGAACGG 58.751 37.037 0.00 0.00 0.00 4.44
4479 6803 9.291664 CTCTAGAAAGACAAGTATTTAGGAACG 57.708 37.037 0.00 0.00 0.00 3.95
4490 6814 8.964476 TTGTTGAAATCTCTAGAAAGACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
4491 6815 9.050601 ACTTGTTGAAATCTCTAGAAAGACAAG 57.949 33.333 17.75 17.75 33.18 3.16
4492 6816 8.830580 CACTTGTTGAAATCTCTAGAAAGACAA 58.169 33.333 0.00 0.00 0.00 3.18
4493 6817 8.204160 TCACTTGTTGAAATCTCTAGAAAGACA 58.796 33.333 0.00 0.00 0.00 3.41
4494 6818 8.491950 GTCACTTGTTGAAATCTCTAGAAAGAC 58.508 37.037 0.00 0.00 35.39 3.01
4495 6819 8.424918 AGTCACTTGTTGAAATCTCTAGAAAGA 58.575 33.333 0.00 0.00 35.39 2.52
4496 6820 8.600449 AGTCACTTGTTGAAATCTCTAGAAAG 57.400 34.615 0.00 0.00 35.39 2.62
4497 6821 9.477484 GTAGTCACTTGTTGAAATCTCTAGAAA 57.523 33.333 0.00 0.00 35.39 2.52
4498 6822 8.638873 TGTAGTCACTTGTTGAAATCTCTAGAA 58.361 33.333 0.00 0.00 35.39 2.10
4499 6823 8.178313 TGTAGTCACTTGTTGAAATCTCTAGA 57.822 34.615 0.00 0.00 35.39 2.43
4500 6824 8.994429 ATGTAGTCACTTGTTGAAATCTCTAG 57.006 34.615 0.00 0.00 35.39 2.43
4501 6825 9.424319 GAATGTAGTCACTTGTTGAAATCTCTA 57.576 33.333 0.00 0.00 35.39 2.43
4502 6826 7.116948 CGAATGTAGTCACTTGTTGAAATCTCT 59.883 37.037 0.00 0.00 35.39 3.10
4503 6827 7.230222 CGAATGTAGTCACTTGTTGAAATCTC 58.770 38.462 0.00 0.00 35.39 2.75
4504 6828 6.147821 CCGAATGTAGTCACTTGTTGAAATCT 59.852 38.462 0.00 0.00 35.39 2.40
4505 6829 6.307155 CCGAATGTAGTCACTTGTTGAAATC 58.693 40.000 0.00 0.00 35.39 2.17
4506 6830 5.334879 GCCGAATGTAGTCACTTGTTGAAAT 60.335 40.000 0.00 0.00 35.39 2.17
4507 6831 4.024387 GCCGAATGTAGTCACTTGTTGAAA 60.024 41.667 0.00 0.00 35.39 2.69
4508 6832 3.496884 GCCGAATGTAGTCACTTGTTGAA 59.503 43.478 0.00 0.00 35.39 2.69
4509 6833 3.064207 GCCGAATGTAGTCACTTGTTGA 58.936 45.455 0.00 0.00 0.00 3.18
4510 6834 2.159841 CGCCGAATGTAGTCACTTGTTG 60.160 50.000 0.00 0.00 0.00 3.33
4511 6835 2.066262 CGCCGAATGTAGTCACTTGTT 58.934 47.619 0.00 0.00 0.00 2.83
4512 6836 1.710013 CGCCGAATGTAGTCACTTGT 58.290 50.000 0.00 0.00 0.00 3.16
4513 6837 0.370273 GCGCCGAATGTAGTCACTTG 59.630 55.000 0.00 0.00 0.00 3.16
4514 6838 0.037697 TGCGCCGAATGTAGTCACTT 60.038 50.000 4.18 0.00 0.00 3.16
4515 6839 0.037697 TTGCGCCGAATGTAGTCACT 60.038 50.000 4.18 0.00 0.00 3.41
4516 6840 0.793861 TTTGCGCCGAATGTAGTCAC 59.206 50.000 4.18 0.00 0.00 3.67
4517 6841 1.514003 TTTTGCGCCGAATGTAGTCA 58.486 45.000 4.18 0.00 0.00 3.41
4518 6842 2.095213 TCATTTTGCGCCGAATGTAGTC 59.905 45.455 23.61 0.00 35.35 2.59
4519 6843 2.080693 TCATTTTGCGCCGAATGTAGT 58.919 42.857 23.61 0.00 35.35 2.73
4520 6844 2.095853 ACTCATTTTGCGCCGAATGTAG 59.904 45.455 23.61 20.96 35.35 2.74
4521 6845 2.080693 ACTCATTTTGCGCCGAATGTA 58.919 42.857 23.61 14.15 35.35 2.29
4522 6846 0.881118 ACTCATTTTGCGCCGAATGT 59.119 45.000 23.61 10.00 35.35 2.71
4523 6847 1.135717 TCACTCATTTTGCGCCGAATG 60.136 47.619 20.56 20.56 35.18 2.67
4524 6848 1.164411 TCACTCATTTTGCGCCGAAT 58.836 45.000 4.18 1.64 0.00 3.34
4525 6849 0.947960 TTCACTCATTTTGCGCCGAA 59.052 45.000 4.18 0.00 0.00 4.30
4526 6850 1.130373 GATTCACTCATTTTGCGCCGA 59.870 47.619 4.18 0.00 0.00 5.54
4527 6851 1.131126 AGATTCACTCATTTTGCGCCG 59.869 47.619 4.18 0.00 0.00 6.46
4528 6852 2.927553 AGATTCACTCATTTTGCGCC 57.072 45.000 4.18 0.00 0.00 6.53
4529 6853 4.091424 GTGTAGATTCACTCATTTTGCGC 58.909 43.478 0.00 0.00 35.68 6.09
4530 6854 5.536554 AGTGTAGATTCACTCATTTTGCG 57.463 39.130 0.00 0.00 44.07 4.85
4531 6855 9.677567 TTAAAAGTGTAGATTCACTCATTTTGC 57.322 29.630 0.00 0.00 46.25 3.68
4569 6893 5.808366 ATGGACTCAACATACGGATGTAT 57.192 39.130 15.10 0.00 45.93 2.29
4570 6894 5.607939 AATGGACTCAACATACGGATGTA 57.392 39.130 15.10 0.00 45.93 2.29
4572 6896 4.875536 TCAAATGGACTCAACATACGGATG 59.124 41.667 5.94 5.94 39.16 3.51
4573 6897 5.097742 TCAAATGGACTCAACATACGGAT 57.902 39.130 0.00 0.00 0.00 4.18
4574 6898 4.545208 TCAAATGGACTCAACATACGGA 57.455 40.909 0.00 0.00 0.00 4.69
4575 6899 5.621197 TTTCAAATGGACTCAACATACGG 57.379 39.130 0.00 0.00 0.00 4.02
4576 6900 5.512788 GCATTTCAAATGGACTCAACATACG 59.487 40.000 12.14 0.00 0.00 3.06
4577 6901 5.807011 GGCATTTCAAATGGACTCAACATAC 59.193 40.000 12.14 0.00 0.00 2.39
4578 6902 5.716228 AGGCATTTCAAATGGACTCAACATA 59.284 36.000 12.14 0.00 0.00 2.29
4579 6903 4.529377 AGGCATTTCAAATGGACTCAACAT 59.471 37.500 12.14 0.00 0.00 2.71
4580 6904 3.896888 AGGCATTTCAAATGGACTCAACA 59.103 39.130 12.14 0.00 0.00 3.33
4581 6905 4.525912 AGGCATTTCAAATGGACTCAAC 57.474 40.909 12.14 0.00 0.00 3.18
4582 6906 5.569355 TCTAGGCATTTCAAATGGACTCAA 58.431 37.500 12.14 0.00 0.00 3.02
4583 6907 5.178096 TCTAGGCATTTCAAATGGACTCA 57.822 39.130 12.14 0.00 0.00 3.41
4584 6908 6.375455 TCTTTCTAGGCATTTCAAATGGACTC 59.625 38.462 12.14 0.00 0.00 3.36
4585 6909 6.151817 GTCTTTCTAGGCATTTCAAATGGACT 59.848 38.462 12.14 3.08 0.00 3.85
4586 6910 6.071952 TGTCTTTCTAGGCATTTCAAATGGAC 60.072 38.462 12.14 8.23 29.10 4.02
4587 6911 6.009589 TGTCTTTCTAGGCATTTCAAATGGA 58.990 36.000 12.14 0.00 29.10 3.41
4588 6912 6.271488 TGTCTTTCTAGGCATTTCAAATGG 57.729 37.500 12.14 0.00 29.10 3.16
4589 6913 7.373493 ACTTGTCTTTCTAGGCATTTCAAATG 58.627 34.615 5.68 5.68 35.56 2.32
4590 6914 7.530426 ACTTGTCTTTCTAGGCATTTCAAAT 57.470 32.000 0.00 0.00 35.56 2.32
4591 6915 6.959639 ACTTGTCTTTCTAGGCATTTCAAA 57.040 33.333 0.00 0.00 35.56 2.69
4592 6916 8.635765 AATACTTGTCTTTCTAGGCATTTCAA 57.364 30.769 0.00 0.00 35.56 2.69
4593 6917 8.514594 CAAATACTTGTCTTTCTAGGCATTTCA 58.485 33.333 0.00 0.00 35.56 2.69
4594 6918 7.970614 CCAAATACTTGTCTTTCTAGGCATTTC 59.029 37.037 0.00 0.00 35.56 2.17
4595 6919 7.093771 CCCAAATACTTGTCTTTCTAGGCATTT 60.094 37.037 0.00 0.00 35.56 2.32
4596 6920 6.378280 CCCAAATACTTGTCTTTCTAGGCATT 59.622 38.462 0.00 0.00 35.56 3.56
4597 6921 5.888161 CCCAAATACTTGTCTTTCTAGGCAT 59.112 40.000 0.00 0.00 35.56 4.40
4598 6922 5.013704 TCCCAAATACTTGTCTTTCTAGGCA 59.986 40.000 0.00 0.00 33.22 4.75
4599 6923 5.497474 TCCCAAATACTTGTCTTTCTAGGC 58.503 41.667 0.00 0.00 0.00 3.93
4600 6924 6.092259 CGTTCCCAAATACTTGTCTTTCTAGG 59.908 42.308 0.00 0.00 0.00 3.02
4601 6925 6.092259 CCGTTCCCAAATACTTGTCTTTCTAG 59.908 42.308 0.00 0.00 0.00 2.43
4602 6926 5.935789 CCGTTCCCAAATACTTGTCTTTCTA 59.064 40.000 0.00 0.00 0.00 2.10
4603 6927 4.760204 CCGTTCCCAAATACTTGTCTTTCT 59.240 41.667 0.00 0.00 0.00 2.52
4604 6928 4.758165 TCCGTTCCCAAATACTTGTCTTTC 59.242 41.667 0.00 0.00 0.00 2.62
4605 6929 4.721132 TCCGTTCCCAAATACTTGTCTTT 58.279 39.130 0.00 0.00 0.00 2.52
4606 6930 4.324267 CTCCGTTCCCAAATACTTGTCTT 58.676 43.478 0.00 0.00 0.00 3.01
4607 6931 3.307480 CCTCCGTTCCCAAATACTTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
4608 6932 3.007635 CCTCCGTTCCCAAATACTTGTC 58.992 50.000 0.00 0.00 0.00 3.18
4609 6933 2.290705 CCCTCCGTTCCCAAATACTTGT 60.291 50.000 0.00 0.00 0.00 3.16
4610 6934 2.026636 TCCCTCCGTTCCCAAATACTTG 60.027 50.000 0.00 0.00 0.00 3.16
4611 6935 2.238898 CTCCCTCCGTTCCCAAATACTT 59.761 50.000 0.00 0.00 0.00 2.24
4612 6936 1.838077 CTCCCTCCGTTCCCAAATACT 59.162 52.381 0.00 0.00 0.00 2.12
4613 6937 1.558294 ACTCCCTCCGTTCCCAAATAC 59.442 52.381 0.00 0.00 0.00 1.89
4614 6938 1.961133 ACTCCCTCCGTTCCCAAATA 58.039 50.000 0.00 0.00 0.00 1.40
4615 6939 1.961133 TACTCCCTCCGTTCCCAAAT 58.039 50.000 0.00 0.00 0.00 2.32
4616 6940 1.961133 ATACTCCCTCCGTTCCCAAA 58.039 50.000 0.00 0.00 0.00 3.28
4617 6941 2.852714 TATACTCCCTCCGTTCCCAA 57.147 50.000 0.00 0.00 0.00 4.12
4618 6942 2.852714 TTATACTCCCTCCGTTCCCA 57.147 50.000 0.00 0.00 0.00 4.37
4619 6943 6.438425 TGTTATATTATACTCCCTCCGTTCCC 59.562 42.308 0.00 0.00 0.00 3.97
4620 6944 7.318893 GTGTTATATTATACTCCCTCCGTTCC 58.681 42.308 0.00 0.00 0.00 3.62
4621 6945 7.318893 GGTGTTATATTATACTCCCTCCGTTC 58.681 42.308 0.00 0.00 0.00 3.95
4622 6946 6.212187 GGGTGTTATATTATACTCCCTCCGTT 59.788 42.308 11.97 0.00 42.25 4.44
4623 6947 5.718607 GGGTGTTATATTATACTCCCTCCGT 59.281 44.000 11.97 0.00 42.25 4.69
4624 6948 6.218108 GGGTGTTATATTATACTCCCTCCG 57.782 45.833 11.97 0.00 42.25 4.63
4628 6952 7.750947 ATGGAGGGTGTTATATTATACTCCC 57.249 40.000 11.78 11.57 44.62 4.30
4629 6953 9.047947 AGAATGGAGGGTGTTATATTATACTCC 57.952 37.037 0.00 0.00 42.68 3.85
4630 6954 9.877178 CAGAATGGAGGGTGTTATATTATACTC 57.123 37.037 0.00 0.00 0.00 2.59
4631 6955 9.393786 ACAGAATGGAGGGTGTTATATTATACT 57.606 33.333 0.00 0.00 43.62 2.12
4668 6993 2.271800 CTACCGGTCAGAATCTGCAAC 58.728 52.381 12.40 0.00 0.00 4.17
4687 7012 0.988832 TCCCCTGCAATCGGTAAACT 59.011 50.000 0.00 0.00 0.00 2.66
4766 7091 2.158652 CCATGGCATCTGTGAAGGAGAT 60.159 50.000 0.00 0.00 0.00 2.75
4819 7144 2.550606 ACAGACGACAGAGAGTGAGAAC 59.449 50.000 0.00 0.00 0.00 3.01
4831 7156 2.425578 TTATGAACGCACAGACGACA 57.574 45.000 0.00 0.00 36.70 4.35
4843 7168 4.438744 CCCGAACTGGAAAGCATTATGAAC 60.439 45.833 0.00 0.00 42.00 3.18
4864 7189 4.426313 CCAGGGAAAGGTCCGCCC 62.426 72.222 8.92 8.92 46.04 6.13
4963 7288 2.153898 CTGGGATCACCTTTGCCCCA 62.154 60.000 0.00 0.00 40.77 4.96
4994 7319 2.216046 GATGATGATCCTCTTTGCGCA 58.784 47.619 5.66 5.66 0.00 6.09
4995 7320 2.216046 TGATGATGATCCTCTTTGCGC 58.784 47.619 0.00 0.00 0.00 6.09
5002 7327 0.673022 GGCGGCTGATGATGATCCTC 60.673 60.000 0.00 0.00 0.00 3.71
5130 7458 5.527214 TGGTTACTTCAGACACATGTTCTTG 59.473 40.000 0.00 0.00 0.00 3.02
5160 7495 1.289066 CGCCAGTCGACTCTTTCCA 59.711 57.895 16.96 0.00 41.67 3.53
5178 7522 3.318017 ACATGTACAAGAGACGAGCAAC 58.682 45.455 4.87 0.00 0.00 4.17
5222 7571 2.092374 GCGACACCCGGGAATTTAC 58.908 57.895 32.02 8.05 39.04 2.01
5241 7590 7.822658 TGCTATACATTTTTGAAGGGTACAAC 58.177 34.615 0.00 0.00 0.00 3.32
5280 7629 4.390264 GCAACTCCTTCCAGTTCTAAACT 58.610 43.478 0.00 0.00 44.06 2.66
5331 7680 6.814954 ACAAGAACAGGGACATACATATCT 57.185 37.500 0.00 0.00 0.00 1.98
5358 7870 5.725551 TTTTGTCCTCCCATGGTATGTAT 57.274 39.130 11.73 0.00 0.00 2.29
5382 7894 6.876257 CAGTCTTGCTTCTTTCTATACAACCT 59.124 38.462 0.00 0.00 0.00 3.50
5423 7936 5.003160 CCATGTACACAAAGATCCACTTCA 58.997 41.667 0.00 0.00 37.93 3.02
5439 7952 6.653320 TCACAGTGGAAATTTACTCCATGTAC 59.347 38.462 1.27 0.00 44.69 2.90
5440 7953 6.653320 GTCACAGTGGAAATTTACTCCATGTA 59.347 38.462 1.27 0.00 44.69 2.29
5464 7977 4.956075 AGTGTTGTTTTCCCATCAAGAAGT 59.044 37.500 0.00 0.00 0.00 3.01
5492 8005 3.121944 GCATTATGCTTCCATCGTACGAG 59.878 47.826 23.89 14.69 40.96 4.18
5506 8019 6.595326 TGCTCCTGTATACATTAGCATTATGC 59.405 38.462 26.44 9.46 45.46 3.14
5530 8043 5.893512 CACAATGTCAGTGTGGAAATTTG 57.106 39.130 22.63 0.27 42.20 2.32
5542 8055 2.495155 TGATCCACCCACAATGTCAG 57.505 50.000 0.00 0.00 0.00 3.51
5577 8090 5.059161 GCATATGTCTGGAGTCATTAGCAA 58.941 41.667 4.29 0.00 0.00 3.91
5597 8110 6.193514 TGATGTGATAATTCGTTGTTGCAT 57.806 33.333 0.00 0.00 0.00 3.96
5601 8114 6.193514 TGCATGATGTGATAATTCGTTGTT 57.806 33.333 0.00 0.00 0.00 2.83
5602 8115 5.816449 TGCATGATGTGATAATTCGTTGT 57.184 34.783 0.00 0.00 0.00 3.32
5615 8168 5.422970 ACTTTTTGGGTGATATGCATGATGT 59.577 36.000 10.16 0.00 0.00 3.06
5655 8208 2.522836 TTTTTGCGGCATGTGTTGAT 57.477 40.000 2.28 0.00 0.00 2.57
5675 8228 7.772757 TGAAGCTTTTGTAATTGGGATGTTTTT 59.227 29.630 0.00 0.00 0.00 1.94
5676 8229 7.278875 TGAAGCTTTTGTAATTGGGATGTTTT 58.721 30.769 0.00 0.00 0.00 2.43
5677 8230 6.825610 TGAAGCTTTTGTAATTGGGATGTTT 58.174 32.000 0.00 0.00 0.00 2.83
5678 8231 6.418057 TGAAGCTTTTGTAATTGGGATGTT 57.582 33.333 0.00 0.00 0.00 2.71
5692 8245 7.324935 TGATGATGTGCATATTTGAAGCTTTT 58.675 30.769 0.00 0.00 37.34 2.27
5728 8281 7.377397 CGGATTTGACAAAAAGTTCGTGAATTA 59.623 33.333 4.41 0.00 0.00 1.40
5734 8287 4.625972 ACGGATTTGACAAAAAGTTCGT 57.374 36.364 4.41 2.65 0.00 3.85
5774 8328 6.747280 CGCAGATTTAAAAAGAAATGACGGAT 59.253 34.615 0.00 0.00 0.00 4.18
5775 8329 6.072948 TCGCAGATTTAAAAAGAAATGACGGA 60.073 34.615 0.00 0.00 0.00 4.69
5776 8330 6.083630 TCGCAGATTTAAAAAGAAATGACGG 58.916 36.000 0.00 0.00 0.00 4.79
5777 8331 7.112844 TGTTCGCAGATTTAAAAAGAAATGACG 59.887 33.333 0.00 0.00 35.04 4.35
5778 8332 8.280909 TGTTCGCAGATTTAAAAAGAAATGAC 57.719 30.769 0.00 0.00 35.04 3.06
5779 8333 8.864069 TTGTTCGCAGATTTAAAAAGAAATGA 57.136 26.923 0.00 0.00 35.04 2.57
5780 8334 9.519905 CATTGTTCGCAGATTTAAAAAGAAATG 57.480 29.630 0.00 0.00 35.04 2.32
5781 8335 9.260002 ACATTGTTCGCAGATTTAAAAAGAAAT 57.740 25.926 0.00 0.00 35.04 2.17
5782 8336 8.641499 ACATTGTTCGCAGATTTAAAAAGAAA 57.359 26.923 0.00 0.00 35.04 2.52
5785 8339 9.993881 CTAAACATTGTTCGCAGATTTAAAAAG 57.006 29.630 1.83 0.00 35.04 2.27
5790 8344 6.653320 AGGACTAAACATTGTTCGCAGATTTA 59.347 34.615 1.83 0.00 35.04 1.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.