Multiple sequence alignment - TraesCS3B01G178300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G178300 chr3B 100.000 5720 0 0 1 5720 182739605 182745324 0.000000e+00 10563.0
1 TraesCS3B01G178300 chr3B 95.745 47 1 1 423 468 736492172 736492218 2.210000e-09 75.0
2 TraesCS3B01G178300 chr3A 94.047 3091 161 16 600 3682 141045987 141042912 0.000000e+00 4667.0
3 TraesCS3B01G178300 chr3A 93.727 813 37 4 4420 5229 141042123 141041322 0.000000e+00 1206.0
4 TraesCS3B01G178300 chr3A 94.970 338 14 1 4042 4379 141042453 141042119 1.410000e-145 527.0
5 TraesCS3B01G178300 chr3A 97.436 195 5 0 3690 3884 141042646 141042452 3.300000e-87 333.0
6 TraesCS3B01G178300 chr3A 85.627 327 27 11 5228 5535 141041248 141040923 5.530000e-85 326.0
7 TraesCS3B01G178300 chr3A 95.918 196 8 0 5520 5715 141040907 141040712 9.250000e-83 318.0
8 TraesCS3B01G178300 chr3A 87.500 176 9 1 1 163 261385345 261385170 2.100000e-44 191.0
9 TraesCS3B01G178300 chr3A 95.536 112 3 2 3879 3990 455782945 455782836 1.640000e-40 178.0
10 TraesCS3B01G178300 chr3A 88.462 104 7 3 163 261 261385118 261385015 2.800000e-23 121.0
11 TraesCS3B01G178300 chr3A 88.889 63 5 2 418 479 737863699 737863760 6.150000e-10 76.8
12 TraesCS3B01G178300 chr3A 97.222 36 1 0 4380 4415 241794484 241794519 1.720000e-05 62.1
13 TraesCS3B01G178300 chr3D 93.071 2944 130 34 597 3504 128989737 128992642 0.000000e+00 4239.0
14 TraesCS3B01G178300 chr3D 91.654 1318 64 24 4420 5697 128993458 128994769 0.000000e+00 1783.0
15 TraesCS3B01G178300 chr3D 96.094 384 14 1 3502 3884 128992745 128993128 4.870000e-175 625.0
16 TraesCS3B01G178300 chr3D 96.450 338 10 2 4042 4379 128993127 128993462 1.800000e-154 556.0
17 TraesCS3B01G178300 chr3D 92.063 126 8 2 247 371 535592441 535592565 5.890000e-40 176.0
18 TraesCS3B01G178300 chr3D 92.941 85 6 0 1 85 544584605 544584521 2.160000e-24 124.0
19 TraesCS3B01G178300 chr3D 94.118 51 2 1 419 468 321940465 321940515 6.150000e-10 76.8
20 TraesCS3B01G178300 chr6B 93.827 486 16 8 1 477 420918356 420918836 0.000000e+00 719.0
21 TraesCS3B01G178300 chr1B 96.901 355 6 3 1 350 458704635 458704281 1.780000e-164 590.0
22 TraesCS3B01G178300 chr1B 87.826 115 1 7 24 126 590416680 590416793 7.780000e-24 122.0
23 TraesCS3B01G178300 chr1B 92.188 64 5 0 3991 4054 645731989 645731926 2.190000e-14 91.6
24 TraesCS3B01G178300 chr1B 94.231 52 2 1 419 469 17531415 17531466 1.710000e-10 78.7
25 TraesCS3B01G178300 chr7D 87.382 317 17 5 169 469 351659330 351659021 5.490000e-90 342.0
26 TraesCS3B01G178300 chr7D 91.525 177 3 4 1 165 351659561 351659385 3.450000e-57 233.0
27 TraesCS3B01G178300 chr7D 96.296 108 4 0 3883 3990 199358587 199358694 1.640000e-40 178.0
28 TraesCS3B01G178300 chr7D 98.214 56 1 0 3991 4046 199358639 199358584 1.310000e-16 99.0
29 TraesCS3B01G178300 chr7A 85.759 316 24 11 169 468 217735874 217735564 1.200000e-81 315.0
30 TraesCS3B01G178300 chr7A 89.266 177 5 4 1 163 299396288 299396112 5.810000e-50 209.0
31 TraesCS3B01G178300 chr7A 87.079 178 8 6 1 163 217736104 217735927 2.720000e-43 187.0
32 TraesCS3B01G178300 chr7A 94.444 54 2 1 419 471 56199411 56199358 1.320000e-11 82.4
33 TraesCS3B01G178300 chr1D 98.148 108 2 0 3883 3990 408872403 408872510 7.570000e-44 189.0
34 TraesCS3B01G178300 chr1D 96.552 58 2 0 3994 4051 105352233 105352176 4.720000e-16 97.1
35 TraesCS3B01G178300 chr1D 88.889 72 6 2 3991 4061 403331737 403331807 2.840000e-13 87.9
36 TraesCS3B01G178300 chr1D 94.444 54 2 1 419 471 164852564 164852511 1.320000e-11 82.4
37 TraesCS3B01G178300 chr1D 89.231 65 5 2 423 485 303807852 303807916 4.750000e-11 80.5
38 TraesCS3B01G178300 chr1D 100.000 41 0 0 431 471 356420985 356421025 6.150000e-10 76.8
39 TraesCS3B01G178300 chr1D 100.000 40 0 0 430 469 480637692 480637731 2.210000e-09 75.0
40 TraesCS3B01G178300 chr1D 92.308 52 3 1 418 468 50885254 50885305 7.950000e-09 73.1
41 TraesCS3B01G178300 chr1D 87.500 64 6 2 419 480 251298617 251298680 7.950000e-09 73.1
42 TraesCS3B01G178300 chr6D 97.222 108 3 0 3883 3990 147675686 147675579 3.520000e-42 183.0
43 TraesCS3B01G178300 chr6D 97.222 108 3 0 3883 3990 366701222 366701115 3.520000e-42 183.0
44 TraesCS3B01G178300 chr6D 98.148 54 1 0 3991 4044 147675634 147675687 1.700000e-15 95.3
45 TraesCS3B01G178300 chr4D 96.330 109 4 0 3883 3991 5086815 5086923 4.550000e-41 180.0
46 TraesCS3B01G178300 chr4D 95.370 108 5 0 3883 3990 10764452 10764559 7.620000e-39 172.0
47 TraesCS3B01G178300 chr2B 96.296 108 4 0 3883 3990 209075695 209075802 1.640000e-40 178.0
48 TraesCS3B01G178300 chr2B 94.118 51 1 2 430 480 710995398 710995446 6.150000e-10 76.8
49 TraesCS3B01G178300 chr2B 86.957 69 7 2 419 486 729516021 729516088 6.150000e-10 76.8
50 TraesCS3B01G178300 chr2D 93.860 114 6 1 3878 3990 38627612 38627499 2.740000e-38 171.0
51 TraesCS3B01G178300 chr2D 91.228 57 3 2 418 473 431519108 431519053 6.150000e-10 76.8
52 TraesCS3B01G178300 chr2A 97.531 81 2 0 85 165 326261975 326262055 7.730000e-29 139.0
53 TraesCS3B01G178300 chr2A 84.706 85 10 1 3963 4044 86650091 86650175 1.320000e-11 82.4
54 TraesCS3B01G178300 chr5B 96.552 58 2 0 3991 4048 700194255 700194198 4.720000e-16 97.1
55 TraesCS3B01G178300 chr7B 96.491 57 2 0 3994 4050 141814488 141814432 1.700000e-15 95.3
56 TraesCS3B01G178300 chr7B 92.188 64 5 0 3991 4054 252178120 252178183 2.190000e-14 91.6
57 TraesCS3B01G178300 chr1A 96.154 52 1 1 419 469 162647846 162647795 3.670000e-12 84.2
58 TraesCS3B01G178300 chr1A 94.545 55 2 1 419 472 244500045 244499991 3.670000e-12 84.2
59 TraesCS3B01G178300 chr5A 91.667 60 4 1 422 480 670236353 670236412 1.320000e-11 82.4
60 TraesCS3B01G178300 chr5A 92.857 56 2 2 419 473 439830769 439830715 4.750000e-11 80.5
61 TraesCS3B01G178300 chr5A 94.340 53 1 2 430 482 707871144 707871094 4.750000e-11 80.5
62 TraesCS3B01G178300 chr5A 89.796 49 3 2 4380 4428 538301628 538301582 1.720000e-05 62.1
63 TraesCS3B01G178300 chr6A 95.918 49 2 0 430 478 312909507 312909459 4.750000e-11 80.5
64 TraesCS3B01G178300 chr6A 87.692 65 5 3 419 482 86393247 86393185 7.950000e-09 73.1
65 TraesCS3B01G178300 chr5D 91.228 57 4 1 429 484 22590277 22590333 6.150000e-10 76.8
66 TraesCS3B01G178300 chrUn 94.000 50 2 1 423 471 296424189 296424238 2.210000e-09 75.0
67 TraesCS3B01G178300 chrUn 100.000 39 0 0 430 468 13810402 13810440 7.950000e-09 73.1
68 TraesCS3B01G178300 chrUn 90.000 60 1 3 431 488 196188967 196188911 7.950000e-09 73.1
69 TraesCS3B01G178300 chrUn 92.308 52 2 2 423 472 250550464 250550413 7.950000e-09 73.1
70 TraesCS3B01G178300 chrUn 92.308 52 2 2 423 472 261964549 261964498 7.950000e-09 73.1
71 TraesCS3B01G178300 chrUn 90.000 60 1 3 431 488 272643259 272643315 7.950000e-09 73.1
72 TraesCS3B01G178300 chrUn 92.308 52 2 2 423 472 273752509 273752560 7.950000e-09 73.1
73 TraesCS3B01G178300 chrUn 100.000 39 0 0 430 468 362507985 362508023 7.950000e-09 73.1
74 TraesCS3B01G178300 chrUn 93.478 46 2 1 428 472 357542595 357542640 3.700000e-07 67.6
75 TraesCS3B01G178300 chrUn 91.667 48 3 1 430 477 29346006 29346052 1.330000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G178300 chr3B 182739605 182745324 5719 False 10563.00 10563 100.000000 1 5720 1 chr3B.!!$F1 5719
1 TraesCS3B01G178300 chr3A 141040712 141045987 5275 True 1229.50 4667 93.620833 600 5715 6 chr3A.!!$R2 5115
2 TraesCS3B01G178300 chr3D 128989737 128994769 5032 False 1800.75 4239 94.317250 597 5697 4 chr3D.!!$F3 5100
3 TraesCS3B01G178300 chr7D 351659021 351659561 540 True 287.50 342 89.453500 1 469 2 chr7D.!!$R2 468
4 TraesCS3B01G178300 chr7A 217735564 217736104 540 True 251.00 315 86.419000 1 468 2 chr7A.!!$R3 467

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
591 672 0.033991 TCCGGAAGTGAGAGGAGGAG 60.034 60.0 0.00 0.00 0.00 3.69 F
754 841 0.261991 TTCTCCGGAGTCCAGCCTAT 59.738 55.0 30.17 0.00 0.00 2.57 F
1399 1510 0.738975 CCATCTTCGTCCGCAGTAGA 59.261 55.0 0.00 0.00 0.00 2.59 F
1594 1705 0.955919 GACGGTCCTTGGGCAGAAAG 60.956 60.0 0.00 0.00 0.00 2.62 F
3350 3482 0.032815 GTCGAGATAGAAGGGCCTGC 59.967 60.0 6.92 4.43 0.00 4.85 F
3901 4397 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.0 5.23 0.00 44.66 2.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1614 1725 1.001860 GGACTTCTGCAGCTTCTGAGT 59.998 52.381 9.47 5.69 32.44 3.41 R
2629 2753 0.034863 GGTGGTTGCGGAATAAGGGA 60.035 55.000 0.00 0.00 0.00 4.20 R
2734 2859 1.446366 GAGGGATCCAGGCGGTTAC 59.554 63.158 15.23 0.00 0.00 2.50 R
3592 3830 0.603065 TTCTCACTAGCGCTTGCAGA 59.397 50.000 18.68 15.90 42.66 4.26 R
4346 4842 1.001048 CTGGTTCAACGACACGGTCTA 60.001 52.381 0.00 0.00 0.00 2.59 R
5699 6341 0.546122 AAGTGAGTGTTGGAGTGGCA 59.454 50.000 0.00 0.00 0.00 4.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
204 275 7.881775 AAGTCCTAAGGCCAAATATTAACAG 57.118 36.000 5.01 0.00 0.00 3.16
213 284 5.163550 GGCCAAATATTAACAGGTGTCCTTC 60.164 44.000 0.00 0.00 0.00 3.46
281 352 4.527038 AGAGGACATGTAGAAACTCCGAAA 59.473 41.667 0.00 0.00 0.00 3.46
307 378 3.702045 ACAAGAACCGGTTGAATTTGGAA 59.298 39.130 27.87 0.00 0.00 3.53
316 387 3.197766 GGTTGAATTTGGAAAGATCCCCC 59.802 47.826 0.00 0.00 45.95 5.40
408 489 4.849329 GGCGCGTAGTGGGACGAG 62.849 72.222 8.43 0.00 45.82 4.18
409 490 3.807538 GCGCGTAGTGGGACGAGA 61.808 66.667 8.43 0.00 45.82 4.04
410 491 2.403987 CGCGTAGTGGGACGAGAG 59.596 66.667 0.00 0.00 45.82 3.20
469 550 3.463944 GCACGGGCATTTGTACTAGTAT 58.536 45.455 3.77 0.00 40.72 2.12
470 551 4.624015 GCACGGGCATTTGTACTAGTATA 58.376 43.478 3.77 0.00 40.72 1.47
471 552 5.051816 GCACGGGCATTTGTACTAGTATAA 58.948 41.667 3.77 6.94 40.72 0.98
472 553 5.176958 GCACGGGCATTTGTACTAGTATAAG 59.823 44.000 3.77 3.84 40.72 1.73
473 554 5.176958 CACGGGCATTTGTACTAGTATAAGC 59.823 44.000 11.35 11.95 0.00 3.09
474 555 5.163385 ACGGGCATTTGTACTAGTATAAGCA 60.163 40.000 18.77 6.44 0.00 3.91
475 556 5.756347 CGGGCATTTGTACTAGTATAAGCAA 59.244 40.000 18.77 11.01 0.00 3.91
476 557 6.259167 CGGGCATTTGTACTAGTATAAGCAAA 59.741 38.462 18.77 16.96 0.00 3.68
477 558 7.201661 CGGGCATTTGTACTAGTATAAGCAAAA 60.202 37.037 18.77 9.50 31.10 2.44
478 559 8.463607 GGGCATTTGTACTAGTATAAGCAAAAA 58.536 33.333 18.77 3.36 31.10 1.94
521 602 4.672587 AAAAACAGGGAAAAGAGGCTTC 57.327 40.909 0.00 0.00 0.00 3.86
522 603 1.897560 AACAGGGAAAAGAGGCTTCG 58.102 50.000 0.00 0.00 0.00 3.79
523 604 0.036875 ACAGGGAAAAGAGGCTTCGG 59.963 55.000 0.00 0.00 0.00 4.30
524 605 1.002011 AGGGAAAAGAGGCTTCGGC 60.002 57.895 0.00 0.00 40.88 5.54
582 663 4.351938 CGCACGGTCCGGAAGTGA 62.352 66.667 32.92 0.37 38.06 3.41
583 664 2.432628 GCACGGTCCGGAAGTGAG 60.433 66.667 32.92 16.27 38.06 3.51
584 665 2.927580 GCACGGTCCGGAAGTGAGA 61.928 63.158 32.92 0.00 38.06 3.27
585 666 1.213013 CACGGTCCGGAAGTGAGAG 59.787 63.158 27.84 8.30 38.06 3.20
586 667 1.977544 ACGGTCCGGAAGTGAGAGG 60.978 63.158 17.28 0.00 0.00 3.69
587 668 1.677966 CGGTCCGGAAGTGAGAGGA 60.678 63.158 5.23 0.00 0.00 3.71
588 669 1.658686 CGGTCCGGAAGTGAGAGGAG 61.659 65.000 5.23 0.00 32.82 3.69
589 670 1.324005 GGTCCGGAAGTGAGAGGAGG 61.324 65.000 5.23 0.00 32.82 4.30
590 671 0.323542 GTCCGGAAGTGAGAGGAGGA 60.324 60.000 5.23 0.00 32.82 3.71
591 672 0.033991 TCCGGAAGTGAGAGGAGGAG 60.034 60.000 0.00 0.00 0.00 3.69
592 673 1.040339 CCGGAAGTGAGAGGAGGAGG 61.040 65.000 0.00 0.00 0.00 4.30
593 674 1.040339 CGGAAGTGAGAGGAGGAGGG 61.040 65.000 0.00 0.00 0.00 4.30
594 675 1.334384 GGAAGTGAGAGGAGGAGGGC 61.334 65.000 0.00 0.00 0.00 5.19
595 676 0.325203 GAAGTGAGAGGAGGAGGGCT 60.325 60.000 0.00 0.00 0.00 5.19
596 677 0.617249 AAGTGAGAGGAGGAGGGCTG 60.617 60.000 0.00 0.00 0.00 4.85
597 678 2.364842 TGAGAGGAGGAGGGCTGC 60.365 66.667 0.00 0.00 0.00 5.25
598 679 3.160748 GAGAGGAGGAGGGCTGCC 61.161 72.222 11.05 11.05 0.00 4.85
636 717 2.983725 AAAAAGCCCAGCCACGCTCT 62.984 55.000 0.00 0.00 36.40 4.09
637 718 2.983725 AAAAGCCCAGCCACGCTCTT 62.984 55.000 0.00 0.00 36.40 2.85
638 719 3.909086 AAGCCCAGCCACGCTCTTC 62.909 63.158 0.00 0.00 36.40 2.87
640 721 4.785453 CCCAGCCACGCTCTTCCC 62.785 72.222 0.00 0.00 36.40 3.97
709 795 0.340208 TCTCTTCCTCCCCTTCCCTC 59.660 60.000 0.00 0.00 0.00 4.30
754 841 0.261991 TTCTCCGGAGTCCAGCCTAT 59.738 55.000 30.17 0.00 0.00 2.57
914 1001 3.790437 CCCATGCGCCTCTGACCT 61.790 66.667 4.18 0.00 0.00 3.85
918 1005 3.258228 ATGCGCCTCTGACCTGCAA 62.258 57.895 4.18 0.00 39.26 4.08
969 1056 3.691049 TTTGACGAGCTTTTCCTTGTG 57.309 42.857 0.00 0.00 29.63 3.33
1104 1215 2.981909 CACCAGCACCAGCACCAG 60.982 66.667 0.00 0.00 45.49 4.00
1105 1216 4.962836 ACCAGCACCAGCACCAGC 62.963 66.667 0.00 0.00 45.49 4.85
1106 1217 4.960866 CCAGCACCAGCACCAGCA 62.961 66.667 0.00 0.00 45.49 4.41
1107 1218 3.667282 CAGCACCAGCACCAGCAC 61.667 66.667 0.00 0.00 45.49 4.40
1108 1219 4.962836 AGCACCAGCACCAGCACC 62.963 66.667 0.00 0.00 45.49 5.01
1110 1221 2.981909 CACCAGCACCAGCACCAG 60.982 66.667 0.00 0.00 45.49 4.00
1111 1222 4.962836 ACCAGCACCAGCACCAGC 62.963 66.667 0.00 0.00 45.49 4.85
1271 1382 5.522460 CCAAAGGTAGTTATGACCGTGTATG 59.478 44.000 0.00 0.00 42.21 2.39
1273 1384 3.047796 GGTAGTTATGACCGTGTATGCG 58.952 50.000 0.00 0.00 0.00 4.73
1303 1414 4.749099 TGTGCCATTTGTGCTGAAATAAAC 59.251 37.500 0.00 0.00 0.00 2.01
1305 1416 3.367630 GCCATTTGTGCTGAAATAAACGG 59.632 43.478 0.00 0.00 0.00 4.44
1328 1439 3.358111 TGGATTGGCAGGATAAACGAA 57.642 42.857 0.00 0.00 0.00 3.85
1383 1494 2.566833 TGCTAGTGCACAAGAACCAT 57.433 45.000 21.04 0.00 45.31 3.55
1384 1495 2.426522 TGCTAGTGCACAAGAACCATC 58.573 47.619 21.04 0.00 45.31 3.51
1391 1502 1.464997 GCACAAGAACCATCTTCGTCC 59.535 52.381 0.00 0.00 44.11 4.79
1399 1510 0.738975 CCATCTTCGTCCGCAGTAGA 59.261 55.000 0.00 0.00 0.00 2.59
1486 1597 6.888632 AGTGAAATCAAGATTAGCCAAGACAT 59.111 34.615 0.00 0.00 0.00 3.06
1502 1613 4.774660 AGACATTCATGAATCTCTGGCT 57.225 40.909 21.26 15.49 27.32 4.75
1594 1705 0.955919 GACGGTCCTTGGGCAGAAAG 60.956 60.000 0.00 0.00 0.00 2.62
1614 1725 3.340034 AGATCGGCAATGGTTTCGTTAA 58.660 40.909 0.00 0.00 0.00 2.01
1711 1822 4.136796 CAGAAGGTGGAACTCAATTCACA 58.863 43.478 0.00 0.00 39.30 3.58
1830 1941 2.746362 GGAGAGTGCAGAATTTGACAGG 59.254 50.000 0.00 0.00 0.00 4.00
1974 2095 2.758423 AGGAAAACACAGTTGTTCCACC 59.242 45.455 17.66 8.41 45.69 4.61
1986 2107 4.695455 AGTTGTTCCACCATAATGAACTCG 59.305 41.667 0.00 0.00 39.24 4.18
1998 2119 6.960992 CCATAATGAACTCGTTGTTGTATGTG 59.039 38.462 1.75 0.00 39.30 3.21
2009 2130 3.821748 TGTTGTATGTGCAAACCAGGTA 58.178 40.909 0.00 0.00 0.00 3.08
2061 2182 5.262588 AGCAAATGAGGAAAGAAAACGTT 57.737 34.783 0.00 0.00 0.00 3.99
2192 2313 6.398918 TGCTAATACTCTCTGAGTTTTGGAC 58.601 40.000 14.51 8.73 40.28 4.02
2209 2330 1.270839 GGACAGGTTTAGCTGTGAGCA 60.271 52.381 18.29 0.00 45.56 4.26
2266 2387 5.596845 TCTTGGTGCCTTATGTTTTTGTTC 58.403 37.500 0.00 0.00 0.00 3.18
2272 2393 7.987458 TGGTGCCTTATGTTTTTGTTCAATTTA 59.013 29.630 0.00 0.00 0.00 1.40
2320 2441 9.823647 TTTCTTAAAATTGCCAATTAGTTGTCA 57.176 25.926 2.54 0.00 33.36 3.58
2356 2477 4.006319 GCCTAACTTCTGTGCTTGATTCT 58.994 43.478 0.00 0.00 0.00 2.40
2365 2486 7.124298 ACTTCTGTGCTTGATTCTATGTACCTA 59.876 37.037 0.00 0.00 0.00 3.08
2421 2542 5.521372 AGCAGTTTTTGAATTCTTGAGTTGC 59.479 36.000 7.05 10.01 0.00 4.17
2441 2562 9.151471 GAGTTGCTGTTTGTGTAGATTATAAGA 57.849 33.333 0.00 0.00 0.00 2.10
2579 2703 1.142097 GCTCCGCTCTGTAAGGGTC 59.858 63.158 0.00 0.00 36.17 4.46
2629 2753 2.507471 CTCCATTTAGCCACTCCCTCTT 59.493 50.000 0.00 0.00 0.00 2.85
2743 2868 5.497474 AGTAAATGAATTCTGTAACCGCCT 58.503 37.500 7.05 0.00 0.00 5.52
2745 2870 2.107950 TGAATTCTGTAACCGCCTGG 57.892 50.000 7.05 0.00 42.84 4.45
2782 2907 4.274950 CGTAATGGGCAGTGGTTTATAAGG 59.725 45.833 0.00 0.00 0.00 2.69
2783 2908 4.601406 AATGGGCAGTGGTTTATAAGGA 57.399 40.909 0.00 0.00 0.00 3.36
2831 2956 7.202016 TCTCAAATGGAATCACAGTGTAAAC 57.798 36.000 0.00 0.00 0.00 2.01
2842 2967 3.502211 CACAGTGTAAACTGACAATCCCC 59.498 47.826 20.22 0.00 39.99 4.81
2843 2968 2.742053 CAGTGTAAACTGACAATCCCCG 59.258 50.000 7.32 0.00 39.99 5.73
2891 3018 4.607293 AGCACTGTCACATTGTTCTCTA 57.393 40.909 0.00 0.00 0.00 2.43
3032 3164 4.338964 TGCATGCCTGATAATTAACACTGG 59.661 41.667 16.68 0.07 0.00 4.00
3261 3393 1.301716 GTCGGCACCAGAGCAGAAA 60.302 57.895 0.00 0.00 40.28 2.52
3282 3414 2.686915 ACAAGGAGATGCAAGCATAAGC 59.313 45.455 7.64 0.57 36.70 3.09
3340 3472 5.011090 TGATGGTCAAAAGGTCGAGATAG 57.989 43.478 0.00 0.00 0.00 2.08
3350 3482 0.032815 GTCGAGATAGAAGGGCCTGC 59.967 60.000 6.92 4.43 0.00 4.85
3351 3483 0.397114 TCGAGATAGAAGGGCCTGCA 60.397 55.000 15.67 0.00 0.00 4.41
3487 3619 1.975680 AGTGTCACGGGTTTGTAGGAT 59.024 47.619 0.00 0.00 0.00 3.24
3581 3819 1.691976 TGGGATGTTATGGAGCTACCG 59.308 52.381 0.00 0.00 42.61 4.02
3592 3830 2.775384 TGGAGCTACCGGATAACCATTT 59.225 45.455 9.46 0.00 42.61 2.32
3595 3833 4.058817 GAGCTACCGGATAACCATTTCTG 58.941 47.826 9.46 0.00 35.59 3.02
3601 3839 2.539547 CGGATAACCATTTCTGCAAGCG 60.540 50.000 0.00 0.00 35.59 4.68
3648 3886 7.118535 GGAAAGTAGGAGATTCTGTTGAAGTTC 59.881 40.741 0.00 0.00 35.44 3.01
3702 4198 5.256389 AGGAGATTTCCCCCTCACTTTTAAT 59.744 40.000 0.00 0.00 45.24 1.40
3839 4335 2.624316 ACTTGTCAAATCATGCTGCG 57.376 45.000 0.00 0.00 0.00 5.18
3886 4382 5.720261 GCACTAAACCATGCTAGTTACTC 57.280 43.478 0.00 0.00 38.84 2.59
3887 4383 4.571176 GCACTAAACCATGCTAGTTACTCC 59.429 45.833 0.00 0.00 38.84 3.85
3888 4384 5.116882 CACTAAACCATGCTAGTTACTCCC 58.883 45.833 0.00 0.00 0.00 4.30
3889 4385 5.030820 ACTAAACCATGCTAGTTACTCCCT 58.969 41.667 0.00 0.00 0.00 4.20
3890 4386 4.489306 AAACCATGCTAGTTACTCCCTC 57.511 45.455 0.00 0.00 0.00 4.30
3891 4387 2.399580 ACCATGCTAGTTACTCCCTCC 58.600 52.381 0.00 0.00 0.00 4.30
3892 4388 1.341531 CCATGCTAGTTACTCCCTCCG 59.658 57.143 0.00 0.00 0.00 4.63
3893 4389 2.032620 CATGCTAGTTACTCCCTCCGT 58.967 52.381 0.00 0.00 0.00 4.69
3894 4390 1.760192 TGCTAGTTACTCCCTCCGTC 58.240 55.000 0.00 0.00 0.00 4.79
3895 4391 1.031235 GCTAGTTACTCCCTCCGTCC 58.969 60.000 0.00 0.00 0.00 4.79
3896 4392 1.307097 CTAGTTACTCCCTCCGTCCG 58.693 60.000 0.00 0.00 0.00 4.79
3897 4393 0.107017 TAGTTACTCCCTCCGTCCGG 60.107 60.000 0.00 0.00 0.00 5.14
3898 4394 1.379044 GTTACTCCCTCCGTCCGGA 60.379 63.158 0.00 0.00 42.90 5.14
3899 4395 0.967380 GTTACTCCCTCCGTCCGGAA 60.967 60.000 5.23 0.00 44.66 4.30
3900 4396 0.251742 TTACTCCCTCCGTCCGGAAA 60.252 55.000 5.23 0.00 44.66 3.13
3901 4397 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
3902 4398 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
3903 4399 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
3904 4400 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
3905 4401 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
3906 4402 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
3907 4403 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
3908 4404 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
3909 4405 1.135315 TCCGTCCGGAAATACTTGTCG 60.135 52.381 5.23 1.25 42.05 4.35
3910 4406 1.274596 CGTCCGGAAATACTTGTCGG 58.725 55.000 5.23 0.00 41.80 4.79
3911 4407 1.135315 CGTCCGGAAATACTTGTCGGA 60.135 52.381 5.23 0.00 46.06 4.55
3912 4408 2.953466 TCCGGAAATACTTGTCGGAG 57.047 50.000 0.00 0.00 43.84 4.63
3913 4409 2.449464 TCCGGAAATACTTGTCGGAGA 58.551 47.619 0.00 0.00 43.84 3.71
3914 4410 2.827322 TCCGGAAATACTTGTCGGAGAA 59.173 45.455 0.00 0.00 43.84 2.87
3915 4411 3.258872 TCCGGAAATACTTGTCGGAGAAA 59.741 43.478 0.00 0.00 43.84 2.52
3916 4412 4.081309 TCCGGAAATACTTGTCGGAGAAAT 60.081 41.667 0.00 0.00 43.84 2.17
3917 4413 5.127519 TCCGGAAATACTTGTCGGAGAAATA 59.872 40.000 0.00 0.00 43.84 1.40
3918 4414 5.462398 CCGGAAATACTTGTCGGAGAAATAG 59.538 44.000 0.00 0.00 42.94 1.73
3919 4415 6.270815 CGGAAATACTTGTCGGAGAAATAGA 58.729 40.000 0.00 0.00 39.69 1.98
3920 4416 6.924060 CGGAAATACTTGTCGGAGAAATAGAT 59.076 38.462 0.00 0.00 39.69 1.98
3921 4417 7.096023 CGGAAATACTTGTCGGAGAAATAGATG 60.096 40.741 0.00 0.00 39.69 2.90
3922 4418 7.711339 GGAAATACTTGTCGGAGAAATAGATGT 59.289 37.037 0.00 0.00 39.69 3.06
3923 4419 9.745880 GAAATACTTGTCGGAGAAATAGATGTA 57.254 33.333 0.00 0.00 39.69 2.29
3925 4421 9.915629 AATACTTGTCGGAGAAATAGATGTATC 57.084 33.333 0.00 0.00 39.69 2.24
3926 4422 7.589958 ACTTGTCGGAGAAATAGATGTATCT 57.410 36.000 0.00 0.00 39.69 1.98
3927 4423 8.693120 ACTTGTCGGAGAAATAGATGTATCTA 57.307 34.615 4.22 4.22 40.45 1.98
3928 4424 8.788806 ACTTGTCGGAGAAATAGATGTATCTAG 58.211 37.037 7.57 0.00 39.84 2.43
3929 4425 8.919777 TTGTCGGAGAAATAGATGTATCTAGA 57.080 34.615 7.57 0.00 39.84 2.43
3930 4426 8.325421 TGTCGGAGAAATAGATGTATCTAGAC 57.675 38.462 0.00 7.60 39.84 2.59
3931 4427 7.117956 TGTCGGAGAAATAGATGTATCTAGACG 59.882 40.741 0.00 5.87 39.84 4.18
3932 4428 6.092396 TCGGAGAAATAGATGTATCTAGACGC 59.908 42.308 0.00 0.00 42.20 5.19
3933 4429 6.128254 CGGAGAAATAGATGTATCTAGACGCA 60.128 42.308 0.00 0.00 42.20 5.24
3934 4430 7.414651 CGGAGAAATAGATGTATCTAGACGCAT 60.415 40.741 9.78 9.78 42.20 4.73
3935 4431 8.247562 GGAGAAATAGATGTATCTAGACGCATT 58.752 37.037 10.93 5.75 42.20 3.56
3936 4432 9.632807 GAGAAATAGATGTATCTAGACGCATTT 57.367 33.333 10.93 8.68 42.20 2.32
3937 4433 9.988815 AGAAATAGATGTATCTAGACGCATTTT 57.011 29.630 10.93 8.42 42.20 1.82
3942 4438 8.804688 AGATGTATCTAGACGCATTTTAGTTC 57.195 34.615 10.93 0.66 34.85 3.01
3943 4439 8.634444 AGATGTATCTAGACGCATTTTAGTTCT 58.366 33.333 10.93 2.49 34.85 3.01
3944 4440 9.894783 GATGTATCTAGACGCATTTTAGTTCTA 57.105 33.333 10.93 0.00 0.00 2.10
3945 4441 9.900710 ATGTATCTAGACGCATTTTAGTTCTAG 57.099 33.333 0.00 0.00 0.00 2.43
3946 4442 9.117183 TGTATCTAGACGCATTTTAGTTCTAGA 57.883 33.333 8.64 8.64 38.94 2.43
3950 4446 9.117183 TCTAGACGCATTTTAGTTCTAGATACA 57.883 33.333 0.00 0.00 32.48 2.29
3951 4447 7.988904 AGACGCATTTTAGTTCTAGATACAC 57.011 36.000 0.00 0.00 0.00 2.90
3952 4448 6.979238 AGACGCATTTTAGTTCTAGATACACC 59.021 38.462 0.00 0.00 0.00 4.16
3953 4449 6.047231 ACGCATTTTAGTTCTAGATACACCC 58.953 40.000 0.00 0.00 0.00 4.61
3954 4450 6.046593 CGCATTTTAGTTCTAGATACACCCA 58.953 40.000 0.00 0.00 0.00 4.51
3955 4451 6.706270 CGCATTTTAGTTCTAGATACACCCAT 59.294 38.462 0.00 0.00 0.00 4.00
3956 4452 7.226720 CGCATTTTAGTTCTAGATACACCCATT 59.773 37.037 0.00 0.00 0.00 3.16
3957 4453 8.903820 GCATTTTAGTTCTAGATACACCCATTT 58.096 33.333 0.00 0.00 0.00 2.32
3962 4458 9.895138 TTAGTTCTAGATACACCCATTTTTACC 57.105 33.333 0.00 0.00 0.00 2.85
3963 4459 7.344134 AGTTCTAGATACACCCATTTTTACCC 58.656 38.462 0.00 0.00 0.00 3.69
3964 4460 6.894735 TCTAGATACACCCATTTTTACCCA 57.105 37.500 0.00 0.00 0.00 4.51
3965 4461 7.460214 TCTAGATACACCCATTTTTACCCAT 57.540 36.000 0.00 0.00 0.00 4.00
3966 4462 7.878495 TCTAGATACACCCATTTTTACCCATT 58.122 34.615 0.00 0.00 0.00 3.16
3967 4463 8.340757 TCTAGATACACCCATTTTTACCCATTT 58.659 33.333 0.00 0.00 0.00 2.32
3968 4464 7.418337 AGATACACCCATTTTTACCCATTTC 57.582 36.000 0.00 0.00 0.00 2.17
3969 4465 7.189087 AGATACACCCATTTTTACCCATTTCT 58.811 34.615 0.00 0.00 0.00 2.52
3970 4466 7.678171 AGATACACCCATTTTTACCCATTTCTT 59.322 33.333 0.00 0.00 0.00 2.52
3971 4467 6.109156 ACACCCATTTTTACCCATTTCTTC 57.891 37.500 0.00 0.00 0.00 2.87
3972 4468 5.167845 CACCCATTTTTACCCATTTCTTCG 58.832 41.667 0.00 0.00 0.00 3.79
3973 4469 5.047660 CACCCATTTTTACCCATTTCTTCGA 60.048 40.000 0.00 0.00 0.00 3.71
3974 4470 5.047590 ACCCATTTTTACCCATTTCTTCGAC 60.048 40.000 0.00 0.00 0.00 4.20
3975 4471 5.047660 CCCATTTTTACCCATTTCTTCGACA 60.048 40.000 0.00 0.00 0.00 4.35
3976 4472 6.451393 CCATTTTTACCCATTTCTTCGACAA 58.549 36.000 0.00 0.00 0.00 3.18
3977 4473 6.586082 CCATTTTTACCCATTTCTTCGACAAG 59.414 38.462 0.00 0.00 0.00 3.16
3978 4474 6.702716 TTTTTACCCATTTCTTCGACAAGT 57.297 33.333 0.00 0.00 0.00 3.16
3979 4475 7.804843 TTTTTACCCATTTCTTCGACAAGTA 57.195 32.000 0.00 0.00 0.00 2.24
3980 4476 7.989416 TTTTACCCATTTCTTCGACAAGTAT 57.011 32.000 0.00 0.00 0.00 2.12
3981 4477 7.989416 TTTACCCATTTCTTCGACAAGTATT 57.011 32.000 0.00 0.00 0.00 1.89
3982 4478 7.989416 TTACCCATTTCTTCGACAAGTATTT 57.011 32.000 0.00 0.00 0.00 1.40
3983 4479 6.496338 ACCCATTTCTTCGACAAGTATTTC 57.504 37.500 0.00 0.00 0.00 2.17
3984 4480 5.414765 ACCCATTTCTTCGACAAGTATTTCC 59.585 40.000 0.00 0.00 0.00 3.13
3985 4481 5.414454 CCCATTTCTTCGACAAGTATTTCCA 59.586 40.000 0.00 0.00 0.00 3.53
3986 4482 6.403636 CCCATTTCTTCGACAAGTATTTCCAG 60.404 42.308 0.00 0.00 0.00 3.86
3987 4483 6.371548 CCATTTCTTCGACAAGTATTTCCAGA 59.628 38.462 0.00 0.00 0.00 3.86
3988 4484 6.780706 TTTCTTCGACAAGTATTTCCAGAC 57.219 37.500 0.00 0.00 0.00 3.51
3989 4485 4.482386 TCTTCGACAAGTATTTCCAGACG 58.518 43.478 0.00 0.00 0.00 4.18
3990 4486 4.216902 TCTTCGACAAGTATTTCCAGACGA 59.783 41.667 0.00 0.00 0.00 4.20
3991 4487 4.713824 TCGACAAGTATTTCCAGACGAT 57.286 40.909 0.00 0.00 0.00 3.73
3992 4488 4.421058 TCGACAAGTATTTCCAGACGATG 58.579 43.478 0.00 0.00 0.00 3.84
3993 4489 3.000322 CGACAAGTATTTCCAGACGATGC 60.000 47.826 0.00 0.00 0.00 3.91
3994 4490 2.930040 ACAAGTATTTCCAGACGATGCG 59.070 45.455 0.00 0.00 0.00 4.73
3995 4491 2.930040 CAAGTATTTCCAGACGATGCGT 59.070 45.455 0.00 0.00 45.10 5.24
4010 4506 6.745159 ACGATGCGTCTAGATACATCTATT 57.255 37.500 24.23 12.92 33.69 1.73
4011 4507 7.147143 ACGATGCGTCTAGATACATCTATTT 57.853 36.000 24.23 11.28 33.69 1.40
4012 4508 7.244898 ACGATGCGTCTAGATACATCTATTTC 58.755 38.462 24.23 8.93 33.69 2.17
4013 4509 7.119992 ACGATGCGTCTAGATACATCTATTTCT 59.880 37.037 24.23 7.34 33.69 2.52
4014 4510 7.638295 CGATGCGTCTAGATACATCTATTTCTC 59.362 40.741 24.23 7.92 38.60 2.87
4015 4511 7.147143 TGCGTCTAGATACATCTATTTCTCC 57.853 40.000 0.00 0.00 38.60 3.71
4016 4512 6.128254 TGCGTCTAGATACATCTATTTCTCCG 60.128 42.308 0.00 0.00 38.60 4.63
4017 4513 6.092396 GCGTCTAGATACATCTATTTCTCCGA 59.908 42.308 0.00 0.00 38.60 4.55
4018 4514 7.457868 CGTCTAGATACATCTATTTCTCCGAC 58.542 42.308 0.00 2.21 38.60 4.79
4019 4515 7.117956 CGTCTAGATACATCTATTTCTCCGACA 59.882 40.741 0.00 0.00 38.60 4.35
4020 4516 8.784994 GTCTAGATACATCTATTTCTCCGACAA 58.215 37.037 0.00 0.00 38.60 3.18
4021 4517 9.004717 TCTAGATACATCTATTTCTCCGACAAG 57.995 37.037 0.00 0.00 38.60 3.16
4022 4518 7.589958 AGATACATCTATTTCTCCGACAAGT 57.410 36.000 0.00 0.00 34.85 3.16
4023 4519 8.693120 AGATACATCTATTTCTCCGACAAGTA 57.307 34.615 0.00 0.00 34.85 2.24
4024 4520 9.303116 AGATACATCTATTTCTCCGACAAGTAT 57.697 33.333 0.00 0.00 34.85 2.12
4025 4521 9.915629 GATACATCTATTTCTCCGACAAGTATT 57.084 33.333 0.00 0.00 0.00 1.89
4027 4523 8.649973 ACATCTATTTCTCCGACAAGTATTTC 57.350 34.615 0.00 0.00 0.00 2.17
4028 4524 7.711339 ACATCTATTTCTCCGACAAGTATTTCC 59.289 37.037 0.00 0.00 0.00 3.13
4029 4525 6.270815 TCTATTTCTCCGACAAGTATTTCCG 58.729 40.000 0.00 0.00 0.00 4.30
4030 4526 2.953466 TCTCCGACAAGTATTTCCGG 57.047 50.000 0.00 0.00 41.36 5.14
4031 4527 2.449464 TCTCCGACAAGTATTTCCGGA 58.551 47.619 0.00 0.00 45.74 5.14
4032 4528 2.165030 TCTCCGACAAGTATTTCCGGAC 59.835 50.000 1.83 0.00 43.47 4.79
4033 4529 1.135315 TCCGACAAGTATTTCCGGACG 60.135 52.381 1.83 0.00 43.47 4.79
4034 4530 1.274596 CGACAAGTATTTCCGGACGG 58.725 55.000 1.83 3.96 0.00 4.79
4035 4531 1.135315 CGACAAGTATTTCCGGACGGA 60.135 52.381 1.83 9.76 43.52 4.69
4036 4532 2.537401 GACAAGTATTTCCGGACGGAG 58.463 52.381 13.64 3.15 46.06 4.63
4037 4533 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
4038 4534 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
4039 4535 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
4040 4536 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
4041 4537 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
4042 4538 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
4117 4613 8.419076 TTTGCTGATTCTTTAAAGGTTTTGTC 57.581 30.769 15.13 5.68 0.00 3.18
4173 4669 5.759506 TCACGTAATGGTGTGTTCAAATT 57.240 34.783 0.00 0.00 39.00 1.82
4368 4864 1.885388 CCGTGTCGTTGAACCAGCA 60.885 57.895 0.00 0.00 0.00 4.41
4378 4874 6.017026 TGTCGTTGAACCAGCAAATATTTGTA 60.017 34.615 25.15 5.22 40.24 2.41
4379 4875 7.027161 GTCGTTGAACCAGCAAATATTTGTAT 58.973 34.615 25.15 14.15 40.24 2.29
4380 4876 7.008266 GTCGTTGAACCAGCAAATATTTGTATG 59.992 37.037 25.15 22.31 40.24 2.39
4381 4877 6.253298 CGTTGAACCAGCAAATATTTGTATGG 59.747 38.462 31.85 31.85 45.02 2.74
4382 4878 6.219417 TGAACCAGCAAATATTTGTATGGG 57.781 37.500 33.97 26.98 44.41 4.00
4383 4879 5.954752 TGAACCAGCAAATATTTGTATGGGA 59.045 36.000 33.97 23.78 44.41 4.37
4384 4880 6.438741 TGAACCAGCAAATATTTGTATGGGAA 59.561 34.615 33.97 24.41 44.41 3.97
4385 4881 6.865834 ACCAGCAAATATTTGTATGGGAAA 57.134 33.333 33.97 0.00 44.41 3.13
4386 4882 7.251321 ACCAGCAAATATTTGTATGGGAAAA 57.749 32.000 33.97 0.00 44.41 2.29
4387 4883 7.330262 ACCAGCAAATATTTGTATGGGAAAAG 58.670 34.615 33.97 20.66 44.41 2.27
4388 4884 6.258507 CCAGCAAATATTTGTATGGGAAAAGC 59.741 38.462 29.00 14.66 40.43 3.51
4389 4885 7.043565 CAGCAAATATTTGTATGGGAAAAGCT 58.956 34.615 25.15 11.50 40.24 3.74
4390 4886 8.196771 CAGCAAATATTTGTATGGGAAAAGCTA 58.803 33.333 25.15 0.00 40.24 3.32
4391 4887 8.416329 AGCAAATATTTGTATGGGAAAAGCTAG 58.584 33.333 25.15 0.00 40.24 3.42
4392 4888 8.413229 GCAAATATTTGTATGGGAAAAGCTAGA 58.587 33.333 25.15 0.00 40.24 2.43
4393 4889 9.956720 CAAATATTTGTATGGGAAAAGCTAGAG 57.043 33.333 18.32 0.00 33.59 2.43
4394 4890 9.700831 AAATATTTGTATGGGAAAAGCTAGAGT 57.299 29.630 0.00 0.00 0.00 3.24
4395 4891 8.682936 ATATTTGTATGGGAAAAGCTAGAGTG 57.317 34.615 0.00 0.00 0.00 3.51
4396 4892 4.487714 TGTATGGGAAAAGCTAGAGTGG 57.512 45.455 0.00 0.00 0.00 4.00
4397 4893 2.426842 ATGGGAAAAGCTAGAGTGGC 57.573 50.000 0.00 0.00 0.00 5.01
4398 4894 1.064003 TGGGAAAAGCTAGAGTGGCA 58.936 50.000 0.00 0.00 0.00 4.92
4399 4895 1.003580 TGGGAAAAGCTAGAGTGGCAG 59.996 52.381 0.00 0.00 0.00 4.85
4400 4896 1.279271 GGGAAAAGCTAGAGTGGCAGA 59.721 52.381 0.00 0.00 0.00 4.26
4401 4897 2.290323 GGGAAAAGCTAGAGTGGCAGAA 60.290 50.000 0.00 0.00 0.00 3.02
4402 4898 3.412386 GGAAAAGCTAGAGTGGCAGAAA 58.588 45.455 0.00 0.00 0.00 2.52
4403 4899 3.189495 GGAAAAGCTAGAGTGGCAGAAAC 59.811 47.826 0.00 0.00 0.00 2.78
4404 4900 3.492102 AAAGCTAGAGTGGCAGAAACA 57.508 42.857 0.00 0.00 0.00 2.83
4405 4901 3.492102 AAGCTAGAGTGGCAGAAACAA 57.508 42.857 0.00 0.00 0.00 2.83
4406 4902 3.492102 AGCTAGAGTGGCAGAAACAAA 57.508 42.857 0.00 0.00 0.00 2.83
4407 4903 3.406764 AGCTAGAGTGGCAGAAACAAAG 58.593 45.455 0.00 0.00 0.00 2.77
4408 4904 3.142174 GCTAGAGTGGCAGAAACAAAGT 58.858 45.455 0.00 0.00 0.00 2.66
4409 4905 3.565902 GCTAGAGTGGCAGAAACAAAGTT 59.434 43.478 0.00 0.00 0.00 2.66
4410 4906 4.036852 GCTAGAGTGGCAGAAACAAAGTTT 59.963 41.667 0.00 0.00 0.00 2.66
4411 4907 5.450550 GCTAGAGTGGCAGAAACAAAGTTTT 60.451 40.000 0.00 0.00 0.00 2.43
4412 4908 4.998788 AGAGTGGCAGAAACAAAGTTTTC 58.001 39.130 0.00 0.00 35.97 2.29
4413 4909 4.112634 GAGTGGCAGAAACAAAGTTTTCC 58.887 43.478 0.00 0.89 36.31 3.13
4414 4910 3.118775 AGTGGCAGAAACAAAGTTTTCCC 60.119 43.478 0.00 0.00 36.31 3.97
4415 4911 3.103742 TGGCAGAAACAAAGTTTTCCCT 58.896 40.909 0.00 0.00 36.31 4.20
4416 4912 3.517500 TGGCAGAAACAAAGTTTTCCCTT 59.482 39.130 0.00 0.00 36.31 3.95
4417 4913 3.871006 GGCAGAAACAAAGTTTTCCCTTG 59.129 43.478 0.00 0.00 36.31 3.61
4418 4914 3.871006 GCAGAAACAAAGTTTTCCCTTGG 59.129 43.478 0.00 0.00 36.31 3.61
4419 4915 4.622933 GCAGAAACAAAGTTTTCCCTTGGT 60.623 41.667 0.00 0.00 36.31 3.67
4420 4916 5.487433 CAGAAACAAAGTTTTCCCTTGGTT 58.513 37.500 0.00 0.00 39.70 3.67
4421 4917 5.351189 CAGAAACAAAGTTTTCCCTTGGTTG 59.649 40.000 0.00 0.00 37.56 3.77
4422 4918 4.901197 AACAAAGTTTTCCCTTGGTTGT 57.099 36.364 0.00 0.00 37.24 3.32
4535 5031 2.496871 CTGCAGTGGACAGAGAGATCTT 59.503 50.000 5.25 0.00 37.32 2.40
4543 5039 4.081254 TGGACAGAGAGATCTTTGATGTGG 60.081 45.833 7.33 0.00 32.92 4.17
4550 5046 3.932710 GAGATCTTTGATGTGGCGTGTTA 59.067 43.478 0.00 0.00 0.00 2.41
4720 5217 1.781786 TTTGGTGCAGCCCAAGTAAA 58.218 45.000 14.36 3.01 44.93 2.01
4722 5219 1.544724 TGGTGCAGCCCAAGTAAATC 58.455 50.000 14.36 0.00 36.04 2.17
4816 5316 8.763049 TCTTTATGTCAACTAGTGATGTGAAG 57.237 34.615 0.00 3.14 38.90 3.02
4835 5335 6.208797 TGTGAAGAGATTATACCGGATACAGG 59.791 42.308 9.46 0.00 36.50 4.00
4856 5356 6.207417 ACAGGGATTACATTGTCAGACAAAAG 59.793 38.462 19.92 16.73 41.96 2.27
4872 5372 9.730705 TCAGACAAAAGATTATCTCAGTGAAAT 57.269 29.630 0.00 0.00 0.00 2.17
4882 5382 9.486497 GATTATCTCAGTGAAATCTCATTGCTA 57.514 33.333 8.25 0.00 38.76 3.49
4918 5418 5.181009 TCTTTGATGAATGCTCGATTGTCT 58.819 37.500 0.00 0.00 0.00 3.41
4934 5434 0.675633 GTCTTGTGGCTTTGGCATGT 59.324 50.000 0.00 0.00 40.92 3.21
4943 5443 3.202906 GGCTTTGGCATGTACTATCGAA 58.797 45.455 0.00 0.00 40.87 3.71
4993 5493 9.178758 GTTCTTTTCACACCTGATATCCTTAAT 57.821 33.333 0.00 0.00 0.00 1.40
5014 5514 0.544357 TCTGTACCCACCCTGTCAGG 60.544 60.000 12.40 12.40 34.30 3.86
5017 5517 0.769247 GTACCCACCCTGTCAGGTTT 59.231 55.000 17.85 1.16 38.39 3.27
5021 5521 1.133482 CCCACCCTGTCAGGTTTTCTT 60.133 52.381 17.85 0.00 38.39 2.52
5023 5523 2.654863 CACCCTGTCAGGTTTTCTTGT 58.345 47.619 17.85 3.62 38.39 3.16
5036 5536 9.495572 TCAGGTTTTCTTGTGTTTTGTAATTTT 57.504 25.926 0.00 0.00 0.00 1.82
5053 5566 0.550914 TTTGAGTCCACCAGGTGCTT 59.449 50.000 14.98 1.01 35.89 3.91
5085 5598 5.868043 TGTCTGTACTTGATGCATGAAAG 57.132 39.130 2.46 10.55 0.00 2.62
5117 5630 3.269381 TGGATTGGGGAAAGAGCTGTATT 59.731 43.478 0.00 0.00 0.00 1.89
5254 5842 1.380524 AATGCTCATCTGCAGTCTGC 58.619 50.000 18.32 18.32 46.71 4.26
5344 5932 3.157680 CTCTTTCCCGGTGGTGGT 58.842 61.111 0.00 0.00 0.00 4.16
5345 5933 1.302511 CTCTTTCCCGGTGGTGGTG 60.303 63.158 0.00 0.00 0.00 4.17
5394 5982 4.872691 AGCTGTCCATTTCTTCAGATAACG 59.127 41.667 0.00 0.00 0.00 3.18
5395 5983 4.494855 GCTGTCCATTTCTTCAGATAACGC 60.495 45.833 0.00 0.00 0.00 4.84
5398 5986 5.351465 TGTCCATTTCTTCAGATAACGCTTC 59.649 40.000 0.00 0.00 0.00 3.86
5399 5987 5.351465 GTCCATTTCTTCAGATAACGCTTCA 59.649 40.000 0.00 0.00 0.00 3.02
5400 5988 5.937540 TCCATTTCTTCAGATAACGCTTCAA 59.062 36.000 0.00 0.00 0.00 2.69
5403 5991 7.756722 CCATTTCTTCAGATAACGCTTCAATTT 59.243 33.333 0.00 0.00 0.00 1.82
5404 5992 8.792538 CATTTCTTCAGATAACGCTTCAATTTC 58.207 33.333 0.00 0.00 0.00 2.17
5405 5993 7.672983 TTCTTCAGATAACGCTTCAATTTCT 57.327 32.000 0.00 0.00 0.00 2.52
5407 5995 8.099364 TCTTCAGATAACGCTTCAATTTCTTT 57.901 30.769 0.00 0.00 0.00 2.52
5409 5997 8.728088 TTCAGATAACGCTTCAATTTCTTTTC 57.272 30.769 0.00 0.00 0.00 2.29
5411 5999 8.567948 TCAGATAACGCTTCAATTTCTTTTCTT 58.432 29.630 0.00 0.00 0.00 2.52
5501 6112 8.837389 GTTACAAGAGAACAAACCTTAACATCT 58.163 33.333 0.00 0.00 0.00 2.90
5504 6115 7.227512 ACAAGAGAACAAACCTTAACATCTGAG 59.772 37.037 0.00 0.00 0.00 3.35
5568 6210 1.686052 CAGCAAAAACCCACAAGGCTA 59.314 47.619 0.00 0.00 40.58 3.93
5603 6245 5.972107 TTTTACGCTCAACTACTCTAGGT 57.028 39.130 0.00 0.00 0.00 3.08
5661 6303 1.885887 CATTCCAAAGCTCCCACGAAA 59.114 47.619 0.00 0.00 0.00 3.46
5683 6325 6.645790 AACAAGCAAGAGAAATCTGTGAAT 57.354 33.333 0.00 0.00 0.00 2.57
5699 6341 3.840666 TGTGAATAAGACCAAGGAGCTCT 59.159 43.478 14.64 0.00 0.00 4.09
5715 6357 0.394192 CTCTGCCACTCCAACACTCA 59.606 55.000 0.00 0.00 0.00 3.41
5716 6358 0.106708 TCTGCCACTCCAACACTCAC 59.893 55.000 0.00 0.00 0.00 3.51
5717 6359 0.107456 CTGCCACTCCAACACTCACT 59.893 55.000 0.00 0.00 0.00 3.41
5718 6360 0.546122 TGCCACTCCAACACTCACTT 59.454 50.000 0.00 0.00 0.00 3.16
5719 6361 0.947244 GCCACTCCAACACTCACTTG 59.053 55.000 0.00 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
89 104 7.863666 AGATCGGAGAGAGTAACTAAATTACG 58.136 38.462 0.00 0.00 44.36 3.18
183 250 6.126409 CACCTGTTAATATTTGGCCTTAGGA 58.874 40.000 3.32 0.00 0.00 2.94
184 251 5.891551 ACACCTGTTAATATTTGGCCTTAGG 59.108 40.000 3.32 0.00 0.00 2.69
213 284 1.524008 GCCCCTTCTTCCACGTTTGG 61.524 60.000 0.00 0.00 45.56 3.28
281 352 2.131776 TTCAACCGGTTCTTGTGGTT 57.868 45.000 19.24 0.00 46.57 3.67
307 378 1.975471 TTAGGTTTCCGGGGGATCTT 58.025 50.000 0.00 0.00 0.00 2.40
316 387 8.148351 TCCAGATCTATTATGTTTAGGTTTCCG 58.852 37.037 0.00 0.00 0.00 4.30
346 417 1.378119 GATCTTTTTCCCCGGCGGT 60.378 57.895 26.32 1.59 0.00 5.68
394 475 1.136984 CACTCTCGTCCCACTACGC 59.863 63.158 0.00 0.00 42.56 4.42
500 581 3.068165 CGAAGCCTCTTTTCCCTGTTTTT 59.932 43.478 0.00 0.00 0.00 1.94
501 582 2.623416 CGAAGCCTCTTTTCCCTGTTTT 59.377 45.455 0.00 0.00 0.00 2.43
502 583 2.230660 CGAAGCCTCTTTTCCCTGTTT 58.769 47.619 0.00 0.00 0.00 2.83
503 584 1.545651 CCGAAGCCTCTTTTCCCTGTT 60.546 52.381 0.00 0.00 0.00 3.16
504 585 0.036875 CCGAAGCCTCTTTTCCCTGT 59.963 55.000 0.00 0.00 0.00 4.00
505 586 1.308783 GCCGAAGCCTCTTTTCCCTG 61.309 60.000 0.00 0.00 0.00 4.45
506 587 1.002011 GCCGAAGCCTCTTTTCCCT 60.002 57.895 0.00 0.00 0.00 4.20
507 588 3.592070 GCCGAAGCCTCTTTTCCC 58.408 61.111 0.00 0.00 0.00 3.97
565 646 4.351938 TCACTTCCGGACCGTGCG 62.352 66.667 22.29 5.31 0.00 5.34
566 647 2.432628 CTCACTTCCGGACCGTGC 60.433 66.667 22.29 0.00 0.00 5.34
567 648 1.213013 CTCTCACTTCCGGACCGTG 59.787 63.158 21.47 21.47 0.00 4.94
568 649 1.977544 CCTCTCACTTCCGGACCGT 60.978 63.158 13.94 0.57 0.00 4.83
569 650 1.658686 CTCCTCTCACTTCCGGACCG 61.659 65.000 1.83 6.99 0.00 4.79
570 651 1.324005 CCTCCTCTCACTTCCGGACC 61.324 65.000 1.83 0.00 0.00 4.46
571 652 0.323542 TCCTCCTCTCACTTCCGGAC 60.324 60.000 1.83 0.00 0.00 4.79
572 653 0.033991 CTCCTCCTCTCACTTCCGGA 60.034 60.000 0.00 0.00 0.00 5.14
573 654 1.040339 CCTCCTCCTCTCACTTCCGG 61.040 65.000 0.00 0.00 0.00 5.14
574 655 1.040339 CCCTCCTCCTCTCACTTCCG 61.040 65.000 0.00 0.00 0.00 4.30
575 656 1.334384 GCCCTCCTCCTCTCACTTCC 61.334 65.000 0.00 0.00 0.00 3.46
576 657 0.325203 AGCCCTCCTCCTCTCACTTC 60.325 60.000 0.00 0.00 0.00 3.01
577 658 0.617249 CAGCCCTCCTCCTCTCACTT 60.617 60.000 0.00 0.00 0.00 3.16
578 659 1.001503 CAGCCCTCCTCCTCTCACT 59.998 63.158 0.00 0.00 0.00 3.41
579 660 2.730524 GCAGCCCTCCTCCTCTCAC 61.731 68.421 0.00 0.00 0.00 3.51
580 661 2.364842 GCAGCCCTCCTCCTCTCA 60.365 66.667 0.00 0.00 0.00 3.27
581 662 3.160748 GGCAGCCCTCCTCCTCTC 61.161 72.222 0.00 0.00 0.00 3.20
582 663 3.569361 TTGGCAGCCCTCCTCCTCT 62.569 63.158 9.64 0.00 0.00 3.69
583 664 3.011517 TTGGCAGCCCTCCTCCTC 61.012 66.667 9.64 0.00 0.00 3.71
584 665 3.013932 CTTGGCAGCCCTCCTCCT 61.014 66.667 9.64 0.00 0.00 3.69
585 666 3.334054 ACTTGGCAGCCCTCCTCC 61.334 66.667 9.64 0.00 0.00 4.30
586 667 0.978146 TAGACTTGGCAGCCCTCCTC 60.978 60.000 9.64 0.00 0.00 3.71
587 668 0.327000 ATAGACTTGGCAGCCCTCCT 60.327 55.000 9.64 3.48 0.00 3.69
588 669 0.179034 CATAGACTTGGCAGCCCTCC 60.179 60.000 9.64 0.00 0.00 4.30
589 670 0.833287 TCATAGACTTGGCAGCCCTC 59.167 55.000 9.64 0.42 0.00 4.30
590 671 1.419387 GATCATAGACTTGGCAGCCCT 59.581 52.381 9.64 0.36 0.00 5.19
591 672 1.419387 AGATCATAGACTTGGCAGCCC 59.581 52.381 9.64 0.00 0.00 5.19
592 673 2.103771 TCAGATCATAGACTTGGCAGCC 59.896 50.000 3.66 3.66 0.00 4.85
593 674 3.465742 TCAGATCATAGACTTGGCAGC 57.534 47.619 0.00 0.00 0.00 5.25
594 675 5.273674 TCTTCAGATCATAGACTTGGCAG 57.726 43.478 0.00 0.00 0.00 4.85
595 676 5.682234 TTCTTCAGATCATAGACTTGGCA 57.318 39.130 0.00 0.00 0.00 4.92
596 677 6.992063 TTTTCTTCAGATCATAGACTTGGC 57.008 37.500 0.00 0.00 0.00 4.52
754 841 3.185594 CGCGTGAAATTAAGTGGAGACAA 59.814 43.478 0.00 0.00 46.06 3.18
931 1018 3.023832 CAAATCCATTTAGCGAAGGGGT 58.976 45.455 6.70 0.00 39.66 4.95
942 1029 4.524328 AGGAAAAGCTCGTCAAATCCATTT 59.476 37.500 0.00 0.00 0.00 2.32
943 1030 4.082125 AGGAAAAGCTCGTCAAATCCATT 58.918 39.130 0.00 0.00 0.00 3.16
994 1081 2.671619 CGGTGGGAACATGGCGTT 60.672 61.111 0.00 0.00 46.14 4.84
1105 1216 2.747855 GAAAGGGAGCGGCTGGTG 60.748 66.667 7.50 0.00 0.00 4.17
1106 1217 4.035102 GGAAAGGGAGCGGCTGGT 62.035 66.667 7.50 0.00 0.00 4.00
1107 1218 3.984193 CTGGAAAGGGAGCGGCTGG 62.984 68.421 7.50 0.00 0.00 4.85
1108 1219 2.437359 CTGGAAAGGGAGCGGCTG 60.437 66.667 7.50 0.00 0.00 4.85
1109 1220 4.416738 GCTGGAAAGGGAGCGGCT 62.417 66.667 0.00 0.00 0.00 5.52
1111 1222 3.721706 AGGCTGGAAAGGGAGCGG 61.722 66.667 0.00 0.00 35.95 5.52
1112 1223 2.437359 CAGGCTGGAAAGGGAGCG 60.437 66.667 6.61 0.00 35.95 5.03
1303 1414 2.051334 TATCCTGCCAATCCAAACCG 57.949 50.000 0.00 0.00 0.00 4.44
1305 1416 3.442273 TCGTTTATCCTGCCAATCCAAAC 59.558 43.478 0.00 0.00 0.00 2.93
1328 1439 3.834813 TCACAAGTGCAATCTCCTCTAGT 59.165 43.478 0.00 0.00 0.00 2.57
1383 1494 1.063616 CGATTCTACTGCGGACGAAGA 59.936 52.381 6.72 0.00 0.00 2.87
1384 1495 1.202154 ACGATTCTACTGCGGACGAAG 60.202 52.381 0.00 0.00 0.00 3.79
1391 1502 2.455032 CCTGAAGACGATTCTACTGCG 58.545 52.381 0.00 0.00 0.00 5.18
1399 1510 1.276421 CACCAGACCCTGAAGACGATT 59.724 52.381 0.00 0.00 32.44 3.34
1502 1613 5.243954 ACAGAGATAATTAGCCGCATCTGTA 59.756 40.000 17.04 0.00 43.07 2.74
1594 1705 3.126343 AGTTAACGAAACCATTGCCGATC 59.874 43.478 0.00 0.00 39.03 3.69
1614 1725 1.001860 GGACTTCTGCAGCTTCTGAGT 59.998 52.381 9.47 5.69 32.44 3.41
1742 1853 3.444742 TGGCCATTTTGATGCTAACTGAG 59.555 43.478 0.00 0.00 0.00 3.35
1974 2095 6.465781 GCACATACAACAACGAGTTCATTATG 59.534 38.462 0.00 3.66 38.74 1.90
1986 2107 3.181480 ACCTGGTTTGCACATACAACAAC 60.181 43.478 0.00 0.00 0.00 3.32
1998 2119 2.819608 TCATGCTTTCTACCTGGTTTGC 59.180 45.455 3.84 3.60 0.00 3.68
2009 2130 2.165845 GGCAATCTGCTTCATGCTTTCT 59.834 45.455 0.00 0.00 44.28 2.52
2120 2241 2.905075 TGTATGCACGGATCTTCTTGG 58.095 47.619 0.00 0.00 0.00 3.61
2192 2313 4.697352 ACTTAATGCTCACAGCTAAACCTG 59.303 41.667 0.00 0.00 42.97 4.00
2248 2369 9.810231 CATAAATTGAACAAAAACATAAGGCAC 57.190 29.630 0.00 0.00 0.00 5.01
2320 2441 1.320344 TTAGGCTGCACTCCGTCGAT 61.320 55.000 0.50 0.00 0.00 3.59
2337 2458 7.764443 GGTACATAGAATCAAGCACAGAAGTTA 59.236 37.037 0.00 0.00 0.00 2.24
2356 2477 9.515226 AAAGAAAACAATCAAGCTAGGTACATA 57.485 29.630 0.00 0.00 0.00 2.29
2579 2703 4.420168 TGCCTTGTTTCTTCAGTTTTTCG 58.580 39.130 0.00 0.00 0.00 3.46
2629 2753 0.034863 GGTGGTTGCGGAATAAGGGA 60.035 55.000 0.00 0.00 0.00 4.20
2734 2859 1.446366 GAGGGATCCAGGCGGTTAC 59.554 63.158 15.23 0.00 0.00 2.50
2782 2907 6.759497 AATCAAGGGTTTAGTTACAGCATC 57.241 37.500 0.00 0.00 0.00 3.91
2783 2908 7.451566 AGAAAATCAAGGGTTTAGTTACAGCAT 59.548 33.333 0.00 0.00 0.00 3.79
2831 2956 2.017049 GTCCATTTCGGGGATTGTCAG 58.983 52.381 0.00 0.00 36.67 3.51
2962 3094 6.594744 AGCAGGTTAATCATATCATCACACA 58.405 36.000 0.00 0.00 0.00 3.72
3032 3164 6.604735 AATGACCTGAAATATAACTGTCGC 57.395 37.500 0.00 0.00 0.00 5.19
3261 3393 2.686915 GCTTATGCTTGCATCTCCTTGT 59.313 45.455 11.64 0.00 36.03 3.16
3282 3414 3.519579 ACTTGCATGATCACTTCTCTCG 58.480 45.455 6.60 0.00 0.00 4.04
3340 3472 2.409870 CGGAATGTGCAGGCCCTTC 61.410 63.158 0.00 0.00 0.00 3.46
3350 3482 3.251479 TGGTCAGAGATTCGGAATGTG 57.749 47.619 8.18 3.29 0.00 3.21
3351 3483 3.981071 TTGGTCAGAGATTCGGAATGT 57.019 42.857 8.18 3.65 0.00 2.71
3487 3619 5.818678 AGTCAGGTAGTTCATTAACACCA 57.181 39.130 11.48 0.00 38.34 4.17
3536 3773 5.579047 TGATGACATCCAGTAAAACCCAAT 58.421 37.500 12.90 0.00 0.00 3.16
3581 3819 2.796032 GCGCTTGCAGAAATGGTTATCC 60.796 50.000 0.00 0.00 38.92 2.59
3592 3830 0.603065 TTCTCACTAGCGCTTGCAGA 59.397 50.000 18.68 15.90 42.66 4.26
3595 3833 2.279582 TAGTTCTCACTAGCGCTTGC 57.720 50.000 18.68 0.00 34.06 4.01
3601 3839 5.967088 TCCTTTCACATAGTTCTCACTAGC 58.033 41.667 0.00 0.00 38.96 3.42
3687 4183 7.003402 TGAAATTTCATTAAAAGTGAGGGGG 57.997 36.000 16.91 0.00 31.01 5.40
3839 4335 8.480853 GCTGTTATTATCACGAGACAAGATAAC 58.519 37.037 0.00 1.52 37.14 1.89
3884 4380 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
3885 4381 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
3886 4382 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
3887 4383 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
3888 4384 2.537401 GACAAGTATTTCCGGACGGAG 58.463 52.381 13.64 3.15 46.06 4.63
3889 4385 1.135315 CGACAAGTATTTCCGGACGGA 60.135 52.381 1.83 9.76 43.52 4.69
3890 4386 1.274596 CGACAAGTATTTCCGGACGG 58.725 55.000 1.83 3.96 0.00 4.79
3891 4387 1.135315 TCCGACAAGTATTTCCGGACG 60.135 52.381 1.83 0.00 43.47 4.79
3892 4388 2.165030 TCTCCGACAAGTATTTCCGGAC 59.835 50.000 1.83 0.00 43.47 4.79
3893 4389 2.449464 TCTCCGACAAGTATTTCCGGA 58.551 47.619 0.00 0.00 45.74 5.14
3894 4390 2.953466 TCTCCGACAAGTATTTCCGG 57.047 50.000 0.00 0.00 41.36 5.14
3895 4391 6.270815 TCTATTTCTCCGACAAGTATTTCCG 58.729 40.000 0.00 0.00 0.00 4.30
3896 4392 7.711339 ACATCTATTTCTCCGACAAGTATTTCC 59.289 37.037 0.00 0.00 0.00 3.13
3897 4393 8.649973 ACATCTATTTCTCCGACAAGTATTTC 57.350 34.615 0.00 0.00 0.00 2.17
3899 4395 9.915629 GATACATCTATTTCTCCGACAAGTATT 57.084 33.333 0.00 0.00 0.00 1.89
3900 4396 9.303116 AGATACATCTATTTCTCCGACAAGTAT 57.697 33.333 0.00 0.00 34.85 2.12
3901 4397 8.693120 AGATACATCTATTTCTCCGACAAGTA 57.307 34.615 0.00 0.00 34.85 2.24
3902 4398 7.589958 AGATACATCTATTTCTCCGACAAGT 57.410 36.000 0.00 0.00 34.85 3.16
3903 4399 9.004717 TCTAGATACATCTATTTCTCCGACAAG 57.995 37.037 0.00 0.00 38.60 3.16
3904 4400 8.784994 GTCTAGATACATCTATTTCTCCGACAA 58.215 37.037 0.00 0.00 38.60 3.18
3905 4401 7.117956 CGTCTAGATACATCTATTTCTCCGACA 59.882 40.741 0.00 0.00 38.60 4.35
3906 4402 7.457868 CGTCTAGATACATCTATTTCTCCGAC 58.542 42.308 0.00 2.21 38.60 4.79
3907 4403 6.092396 GCGTCTAGATACATCTATTTCTCCGA 59.908 42.308 0.00 0.00 38.60 4.55
3908 4404 6.128254 TGCGTCTAGATACATCTATTTCTCCG 60.128 42.308 0.00 0.00 38.60 4.63
3909 4405 7.147143 TGCGTCTAGATACATCTATTTCTCC 57.853 40.000 0.00 0.00 38.60 3.71
3910 4406 9.632807 AAATGCGTCTAGATACATCTATTTCTC 57.367 33.333 10.00 0.00 38.60 2.87
3911 4407 9.988815 AAAATGCGTCTAGATACATCTATTTCT 57.011 29.630 10.00 0.00 38.60 2.52
3916 4412 9.894783 GAACTAAAATGCGTCTAGATACATCTA 57.105 33.333 10.00 0.00 38.32 1.98
3917 4413 8.634444 AGAACTAAAATGCGTCTAGATACATCT 58.366 33.333 10.00 0.00 40.86 2.90
3918 4414 8.804688 AGAACTAAAATGCGTCTAGATACATC 57.195 34.615 10.00 0.00 0.00 3.06
3919 4415 9.900710 CTAGAACTAAAATGCGTCTAGATACAT 57.099 33.333 0.00 0.00 0.00 2.29
3920 4416 9.117183 TCTAGAACTAAAATGCGTCTAGATACA 57.883 33.333 0.00 0.00 32.48 2.29
3924 4420 9.117183 TGTATCTAGAACTAAAATGCGTCTAGA 57.883 33.333 10.27 10.27 38.94 2.43
3925 4421 9.171701 GTGTATCTAGAACTAAAATGCGTCTAG 57.828 37.037 0.00 0.00 0.00 2.43
3926 4422 8.133627 GGTGTATCTAGAACTAAAATGCGTCTA 58.866 37.037 0.00 0.00 0.00 2.59
3927 4423 6.979238 GGTGTATCTAGAACTAAAATGCGTCT 59.021 38.462 0.00 0.00 0.00 4.18
3928 4424 6.200475 GGGTGTATCTAGAACTAAAATGCGTC 59.800 42.308 0.00 0.00 0.00 5.19
3929 4425 6.047231 GGGTGTATCTAGAACTAAAATGCGT 58.953 40.000 0.00 0.00 0.00 5.24
3930 4426 6.046593 TGGGTGTATCTAGAACTAAAATGCG 58.953 40.000 0.00 0.00 0.00 4.73
3931 4427 8.451908 AATGGGTGTATCTAGAACTAAAATGC 57.548 34.615 0.00 0.00 0.00 3.56
3936 4432 9.895138 GGTAAAAATGGGTGTATCTAGAACTAA 57.105 33.333 0.00 0.00 0.00 2.24
3937 4433 8.488668 GGGTAAAAATGGGTGTATCTAGAACTA 58.511 37.037 0.00 0.00 0.00 2.24
3938 4434 7.037153 TGGGTAAAAATGGGTGTATCTAGAACT 60.037 37.037 0.00 0.00 0.00 3.01
3939 4435 7.114095 TGGGTAAAAATGGGTGTATCTAGAAC 58.886 38.462 0.00 0.00 0.00 3.01
3940 4436 7.273457 TGGGTAAAAATGGGTGTATCTAGAA 57.727 36.000 0.00 0.00 0.00 2.10
3941 4437 6.894735 TGGGTAAAAATGGGTGTATCTAGA 57.105 37.500 0.00 0.00 0.00 2.43
3942 4438 8.533569 AAATGGGTAAAAATGGGTGTATCTAG 57.466 34.615 0.00 0.00 0.00 2.43
3943 4439 8.340757 AGAAATGGGTAAAAATGGGTGTATCTA 58.659 33.333 0.00 0.00 0.00 1.98
3944 4440 7.189087 AGAAATGGGTAAAAATGGGTGTATCT 58.811 34.615 0.00 0.00 0.00 1.98
3945 4441 7.418337 AGAAATGGGTAAAAATGGGTGTATC 57.582 36.000 0.00 0.00 0.00 2.24
3946 4442 7.363443 CGAAGAAATGGGTAAAAATGGGTGTAT 60.363 37.037 0.00 0.00 0.00 2.29
3947 4443 6.071840 CGAAGAAATGGGTAAAAATGGGTGTA 60.072 38.462 0.00 0.00 0.00 2.90
3948 4444 5.279256 CGAAGAAATGGGTAAAAATGGGTGT 60.279 40.000 0.00 0.00 0.00 4.16
3949 4445 5.047660 TCGAAGAAATGGGTAAAAATGGGTG 60.048 40.000 0.00 0.00 0.00 4.61
3950 4446 5.047590 GTCGAAGAAATGGGTAAAAATGGGT 60.048 40.000 0.00 0.00 39.69 4.51
3951 4447 5.047660 TGTCGAAGAAATGGGTAAAAATGGG 60.048 40.000 0.00 0.00 39.69 4.00
3952 4448 6.019779 TGTCGAAGAAATGGGTAAAAATGG 57.980 37.500 0.00 0.00 39.69 3.16
3953 4449 7.145323 ACTTGTCGAAGAAATGGGTAAAAATG 58.855 34.615 0.00 0.00 39.69 2.32
3954 4450 7.284919 ACTTGTCGAAGAAATGGGTAAAAAT 57.715 32.000 0.00 0.00 39.69 1.82
3955 4451 6.702716 ACTTGTCGAAGAAATGGGTAAAAA 57.297 33.333 0.00 0.00 39.69 1.94
3956 4452 7.989416 ATACTTGTCGAAGAAATGGGTAAAA 57.011 32.000 0.00 0.00 39.69 1.52
3957 4453 7.989416 AATACTTGTCGAAGAAATGGGTAAA 57.011 32.000 0.00 0.00 39.69 2.01
3958 4454 7.120138 GGAAATACTTGTCGAAGAAATGGGTAA 59.880 37.037 0.00 0.00 39.69 2.85
3959 4455 6.596497 GGAAATACTTGTCGAAGAAATGGGTA 59.404 38.462 0.00 0.00 39.69 3.69
3960 4456 5.414765 GGAAATACTTGTCGAAGAAATGGGT 59.585 40.000 0.00 0.00 39.69 4.51
3961 4457 5.414454 TGGAAATACTTGTCGAAGAAATGGG 59.586 40.000 0.00 0.00 39.69 4.00
3962 4458 6.371548 TCTGGAAATACTTGTCGAAGAAATGG 59.628 38.462 0.00 0.00 39.69 3.16
3963 4459 7.237173 GTCTGGAAATACTTGTCGAAGAAATG 58.763 38.462 0.00 0.00 39.69 2.32
3964 4460 6.090898 CGTCTGGAAATACTTGTCGAAGAAAT 59.909 38.462 0.00 0.00 39.69 2.17
3965 4461 5.404366 CGTCTGGAAATACTTGTCGAAGAAA 59.596 40.000 0.00 0.00 39.69 2.52
3966 4462 4.921515 CGTCTGGAAATACTTGTCGAAGAA 59.078 41.667 0.00 0.00 39.69 2.52
3967 4463 4.216902 TCGTCTGGAAATACTTGTCGAAGA 59.783 41.667 0.00 0.00 32.98 2.87
3968 4464 4.482386 TCGTCTGGAAATACTTGTCGAAG 58.518 43.478 0.00 0.00 35.07 3.79
3969 4465 4.508461 TCGTCTGGAAATACTTGTCGAA 57.492 40.909 0.00 0.00 0.00 3.71
3970 4466 4.421058 CATCGTCTGGAAATACTTGTCGA 58.579 43.478 0.00 0.00 0.00 4.20
3971 4467 3.000322 GCATCGTCTGGAAATACTTGTCG 60.000 47.826 0.00 0.00 0.00 4.35
3972 4468 3.000322 CGCATCGTCTGGAAATACTTGTC 60.000 47.826 0.00 0.00 0.00 3.18
3973 4469 2.930040 CGCATCGTCTGGAAATACTTGT 59.070 45.455 0.00 0.00 0.00 3.16
3974 4470 2.930040 ACGCATCGTCTGGAAATACTTG 59.070 45.455 0.00 0.00 33.69 3.16
3975 4471 3.247006 ACGCATCGTCTGGAAATACTT 57.753 42.857 0.00 0.00 33.69 2.24
3976 4472 2.961526 ACGCATCGTCTGGAAATACT 57.038 45.000 0.00 0.00 33.69 2.12
3986 4482 5.781452 TAGATGTATCTAGACGCATCGTC 57.219 43.478 22.30 10.97 45.56 4.20
3987 4483 6.745159 AATAGATGTATCTAGACGCATCGT 57.255 37.500 22.30 16.29 42.20 3.73
3988 4484 7.468441 AGAAATAGATGTATCTAGACGCATCG 58.532 38.462 22.30 0.00 42.20 3.84
3989 4485 7.913297 GGAGAAATAGATGTATCTAGACGCATC 59.087 40.741 21.62 21.62 42.20 3.91
3990 4486 7.414651 CGGAGAAATAGATGTATCTAGACGCAT 60.415 40.741 9.78 9.78 42.20 4.73
3991 4487 6.128254 CGGAGAAATAGATGTATCTAGACGCA 60.128 42.308 0.00 0.00 42.20 5.24
3992 4488 6.092396 TCGGAGAAATAGATGTATCTAGACGC 59.908 42.308 0.00 0.00 42.20 5.19
3993 4489 7.117956 TGTCGGAGAAATAGATGTATCTAGACG 59.882 40.741 0.00 5.87 39.84 4.18
3994 4490 8.325421 TGTCGGAGAAATAGATGTATCTAGAC 57.675 38.462 0.00 7.60 39.84 2.59
3995 4491 8.919777 TTGTCGGAGAAATAGATGTATCTAGA 57.080 34.615 7.57 0.00 39.84 2.43
3996 4492 8.788806 ACTTGTCGGAGAAATAGATGTATCTAG 58.211 37.037 7.57 0.00 39.84 2.43
3997 4493 8.693120 ACTTGTCGGAGAAATAGATGTATCTA 57.307 34.615 4.22 4.22 40.45 1.98
3998 4494 7.589958 ACTTGTCGGAGAAATAGATGTATCT 57.410 36.000 0.00 0.00 39.69 1.98
3999 4495 9.915629 AATACTTGTCGGAGAAATAGATGTATC 57.084 33.333 0.00 0.00 39.69 2.24
4001 4497 9.745880 GAAATACTTGTCGGAGAAATAGATGTA 57.254 33.333 0.00 0.00 39.69 2.29
4002 4498 7.711339 GGAAATACTTGTCGGAGAAATAGATGT 59.289 37.037 0.00 0.00 39.69 3.06
4003 4499 7.096023 CGGAAATACTTGTCGGAGAAATAGATG 60.096 40.741 0.00 0.00 39.69 2.90
4004 4500 6.924060 CGGAAATACTTGTCGGAGAAATAGAT 59.076 38.462 0.00 0.00 39.69 1.98
4005 4501 6.270815 CGGAAATACTTGTCGGAGAAATAGA 58.729 40.000 0.00 0.00 39.69 1.98
4006 4502 5.462398 CCGGAAATACTTGTCGGAGAAATAG 59.538 44.000 0.00 0.00 42.94 1.73
4007 4503 5.127519 TCCGGAAATACTTGTCGGAGAAATA 59.872 40.000 0.00 0.00 43.84 1.40
4008 4504 4.081309 TCCGGAAATACTTGTCGGAGAAAT 60.081 41.667 0.00 0.00 43.84 2.17
4009 4505 3.258872 TCCGGAAATACTTGTCGGAGAAA 59.741 43.478 0.00 0.00 43.84 2.52
4010 4506 2.827322 TCCGGAAATACTTGTCGGAGAA 59.173 45.455 0.00 0.00 43.84 2.87
4011 4507 2.449464 TCCGGAAATACTTGTCGGAGA 58.551 47.619 0.00 0.00 43.84 3.71
4012 4508 2.953466 TCCGGAAATACTTGTCGGAG 57.047 50.000 0.00 0.00 43.84 4.63
4013 4509 1.135315 CGTCCGGAAATACTTGTCGGA 60.135 52.381 5.23 0.00 46.06 4.55
4014 4510 1.274596 CGTCCGGAAATACTTGTCGG 58.725 55.000 5.23 0.00 41.80 4.79
4015 4511 1.135315 TCCGTCCGGAAATACTTGTCG 60.135 52.381 5.23 1.25 42.05 4.35
4016 4512 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
4017 4513 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
4018 4514 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
4019 4515 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
4020 4516 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
4021 4517 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
4022 4518 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
4023 4519 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
4024 4520 0.032813 ATACTCCCTCCGTCCGGAAA 60.033 55.000 5.23 0.00 44.66 3.13
4025 4521 0.032813 AATACTCCCTCCGTCCGGAA 60.033 55.000 5.23 0.00 44.66 4.30
4026 4522 0.032813 AAATACTCCCTCCGTCCGGA 60.033 55.000 0.00 0.00 42.90 5.14
4027 4523 0.104304 CAAATACTCCCTCCGTCCGG 59.896 60.000 0.00 0.00 0.00 5.14
4028 4524 1.108776 TCAAATACTCCCTCCGTCCG 58.891 55.000 0.00 0.00 0.00 4.79
4029 4525 1.829222 TGTCAAATACTCCCTCCGTCC 59.171 52.381 0.00 0.00 0.00 4.79
4030 4526 3.522553 CTTGTCAAATACTCCCTCCGTC 58.477 50.000 0.00 0.00 0.00 4.79
4031 4527 2.354805 GCTTGTCAAATACTCCCTCCGT 60.355 50.000 0.00 0.00 0.00 4.69
4032 4528 2.280628 GCTTGTCAAATACTCCCTCCG 58.719 52.381 0.00 0.00 0.00 4.63
4033 4529 3.350219 TGCTTGTCAAATACTCCCTCC 57.650 47.619 0.00 0.00 0.00 4.30
4034 4530 3.879892 GGATGCTTGTCAAATACTCCCTC 59.120 47.826 0.00 0.00 0.00 4.30
4035 4531 3.525199 AGGATGCTTGTCAAATACTCCCT 59.475 43.478 0.00 0.00 0.00 4.20
4036 4532 3.891049 AGGATGCTTGTCAAATACTCCC 58.109 45.455 0.00 0.00 0.00 4.30
4037 4533 5.189180 AGAAGGATGCTTGTCAAATACTCC 58.811 41.667 3.35 0.00 0.00 3.85
4038 4534 5.877012 TGAGAAGGATGCTTGTCAAATACTC 59.123 40.000 22.01 11.59 34.38 2.59
4039 4535 5.809001 TGAGAAGGATGCTTGTCAAATACT 58.191 37.500 22.01 2.49 34.38 2.12
4040 4536 6.493116 CATGAGAAGGATGCTTGTCAAATAC 58.507 40.000 26.59 1.56 39.49 1.89
4041 4537 5.066893 GCATGAGAAGGATGCTTGTCAAATA 59.933 40.000 26.59 7.50 42.52 1.40
4042 4538 4.142227 GCATGAGAAGGATGCTTGTCAAAT 60.142 41.667 26.59 11.80 42.52 2.32
4067 4563 8.915871 ATCATATTTACACAGTGAATTTGCAC 57.084 30.769 7.81 0.00 39.05 4.57
4346 4842 1.001048 CTGGTTCAACGACACGGTCTA 60.001 52.381 0.00 0.00 0.00 2.59
4368 4864 9.700831 ACTCTAGCTTTTCCCATACAAATATTT 57.299 29.630 0.00 0.00 0.00 1.40
4378 4874 1.635487 TGCCACTCTAGCTTTTCCCAT 59.365 47.619 0.00 0.00 0.00 4.00
4379 4875 1.003580 CTGCCACTCTAGCTTTTCCCA 59.996 52.381 0.00 0.00 0.00 4.37
4380 4876 1.279271 TCTGCCACTCTAGCTTTTCCC 59.721 52.381 0.00 0.00 0.00 3.97
4381 4877 2.770164 TCTGCCACTCTAGCTTTTCC 57.230 50.000 0.00 0.00 0.00 3.13
4382 4878 3.815401 TGTTTCTGCCACTCTAGCTTTTC 59.185 43.478 0.00 0.00 0.00 2.29
4383 4879 3.820557 TGTTTCTGCCACTCTAGCTTTT 58.179 40.909 0.00 0.00 0.00 2.27
4384 4880 3.492102 TGTTTCTGCCACTCTAGCTTT 57.508 42.857 0.00 0.00 0.00 3.51
4385 4881 3.492102 TTGTTTCTGCCACTCTAGCTT 57.508 42.857 0.00 0.00 0.00 3.74
4386 4882 3.181450 ACTTTGTTTCTGCCACTCTAGCT 60.181 43.478 0.00 0.00 0.00 3.32
4387 4883 3.142174 ACTTTGTTTCTGCCACTCTAGC 58.858 45.455 0.00 0.00 0.00 3.42
4388 4884 5.757850 AAACTTTGTTTCTGCCACTCTAG 57.242 39.130 0.00 0.00 0.00 2.43
4389 4885 5.067283 GGAAAACTTTGTTTCTGCCACTCTA 59.933 40.000 0.00 0.00 37.60 2.43
4390 4886 4.142160 GGAAAACTTTGTTTCTGCCACTCT 60.142 41.667 0.00 0.00 37.60 3.24
4391 4887 4.112634 GGAAAACTTTGTTTCTGCCACTC 58.887 43.478 0.00 0.00 37.60 3.51
4392 4888 3.118775 GGGAAAACTTTGTTTCTGCCACT 60.119 43.478 0.00 0.00 37.60 4.00
4393 4889 3.118775 AGGGAAAACTTTGTTTCTGCCAC 60.119 43.478 13.40 5.35 37.60 5.01
4394 4890 3.103742 AGGGAAAACTTTGTTTCTGCCA 58.896 40.909 13.40 0.00 37.60 4.92
4395 4891 3.819564 AGGGAAAACTTTGTTTCTGCC 57.180 42.857 0.00 3.05 37.60 4.85
4396 4892 3.871006 CCAAGGGAAAACTTTGTTTCTGC 59.129 43.478 0.00 0.00 37.60 4.26
4397 4893 5.084818 ACCAAGGGAAAACTTTGTTTCTG 57.915 39.130 0.00 0.00 37.60 3.02
4398 4894 5.012664 ACAACCAAGGGAAAACTTTGTTTCT 59.987 36.000 0.00 0.00 35.06 2.52
4399 4895 5.242434 ACAACCAAGGGAAAACTTTGTTTC 58.758 37.500 0.00 0.00 35.06 2.78
4400 4896 5.235850 ACAACCAAGGGAAAACTTTGTTT 57.764 34.783 0.00 0.00 35.06 2.83
4401 4897 4.901197 ACAACCAAGGGAAAACTTTGTT 57.099 36.364 0.00 0.00 36.95 2.83
4402 4898 6.361768 TTTACAACCAAGGGAAAACTTTGT 57.638 33.333 0.00 0.00 34.59 2.83
4403 4899 7.857734 AATTTACAACCAAGGGAAAACTTTG 57.142 32.000 0.00 0.00 36.04 2.77
4404 4900 9.554395 CATAATTTACAACCAAGGGAAAACTTT 57.446 29.630 0.00 0.00 0.00 2.66
4405 4901 8.929487 TCATAATTTACAACCAAGGGAAAACTT 58.071 29.630 0.00 0.00 0.00 2.66
4406 4902 8.485578 TCATAATTTACAACCAAGGGAAAACT 57.514 30.769 0.00 0.00 0.00 2.66
4435 4931 4.025040 ACAGACCTGCAATGAATGAAGA 57.975 40.909 0.00 0.00 36.73 2.87
4535 5031 4.371855 TTTGTTTAACACGCCACATCAA 57.628 36.364 0.00 0.00 0.00 2.57
4543 5039 6.741448 ACATGTAACATTTGTTTAACACGC 57.259 33.333 0.00 0.00 39.31 5.34
4591 5087 5.719173 CATTTAGAAGAATCCCCGCAAAAA 58.281 37.500 0.00 0.00 0.00 1.94
4720 5217 4.230502 AGAACCATTGTCACCCAATAGGAT 59.769 41.667 0.00 0.00 41.93 3.24
4722 5219 3.968265 AGAACCATTGTCACCCAATAGG 58.032 45.455 0.00 0.00 41.93 2.57
4816 5316 6.793505 AATCCCTGTATCCGGTATAATCTC 57.206 41.667 0.00 0.00 0.00 2.75
4856 5356 8.380743 AGCAATGAGATTTCACTGAGATAATC 57.619 34.615 0.00 0.00 32.42 1.75
4872 5372 4.861196 AGGTCTACAGACTAGCAATGAGA 58.139 43.478 9.15 0.00 44.20 3.27
4882 5382 6.672266 TTCATCAAAGAAGGTCTACAGACT 57.328 37.500 9.15 0.00 44.20 3.24
4918 5418 1.993956 AGTACATGCCAAAGCCACAA 58.006 45.000 0.00 0.00 38.69 3.33
4934 5434 8.766000 TTGACAGCAACTTAAATTCGATAGTA 57.234 30.769 0.00 0.00 37.40 1.82
4993 5493 2.625883 CCTGACAGGGTGGGTACAGATA 60.626 54.545 14.26 0.00 0.00 1.98
5017 5517 8.307483 TGGACTCAAAATTACAAAACACAAGAA 58.693 29.630 0.00 0.00 0.00 2.52
5021 5521 6.071334 TGGTGGACTCAAAATTACAAAACACA 60.071 34.615 0.00 0.00 0.00 3.72
5023 5523 6.406400 CCTGGTGGACTCAAAATTACAAAACA 60.406 38.462 0.00 0.00 34.57 2.83
5036 5536 1.053835 TGAAGCACCTGGTGGACTCA 61.054 55.000 27.02 13.40 37.04 3.41
5053 5566 5.529581 TCAAGTACAGACAACACAGATGA 57.470 39.130 0.00 0.00 0.00 2.92
5085 5598 1.203125 TCCCCAATCCAAAACTCCACC 60.203 52.381 0.00 0.00 0.00 4.61
5251 5839 3.058777 GCAAAATTCCACAACCAATGCAG 60.059 43.478 0.00 0.00 0.00 4.41
5252 5840 2.877168 GCAAAATTCCACAACCAATGCA 59.123 40.909 0.00 0.00 0.00 3.96
5253 5841 3.140623 AGCAAAATTCCACAACCAATGC 58.859 40.909 0.00 0.00 0.00 3.56
5254 5842 4.023878 CCAAGCAAAATTCCACAACCAATG 60.024 41.667 0.00 0.00 0.00 2.82
5255 5843 4.136051 CCAAGCAAAATTCCACAACCAAT 58.864 39.130 0.00 0.00 0.00 3.16
5256 5844 3.198635 TCCAAGCAAAATTCCACAACCAA 59.801 39.130 0.00 0.00 0.00 3.67
5257 5845 2.768527 TCCAAGCAAAATTCCACAACCA 59.231 40.909 0.00 0.00 0.00 3.67
5258 5846 3.467374 TCCAAGCAAAATTCCACAACC 57.533 42.857 0.00 0.00 0.00 3.77
5259 5847 5.277925 CCATTTCCAAGCAAAATTCCACAAC 60.278 40.000 0.00 0.00 0.00 3.32
5344 5932 4.980592 TCAGCTGCCAGGGGGTCA 62.981 66.667 9.47 0.00 36.17 4.02
5345 5933 3.210012 TTTCAGCTGCCAGGGGGTC 62.210 63.158 9.47 0.00 36.17 4.46
5419 6028 1.135575 CAAAGCTCGTGCCTCCATTTC 60.136 52.381 5.73 0.00 40.80 2.17
5517 6128 5.047164 AGCATTTAAGTTTGATCATGCCACA 60.047 36.000 9.44 0.00 38.22 4.17
5568 6210 8.299570 AGTTGAGCGTAAAATCAAAGATGAATT 58.700 29.630 0.00 0.00 39.49 2.17
5661 6303 7.663081 TCTTATTCACAGATTTCTCTTGCTTGT 59.337 33.333 0.00 0.00 0.00 3.16
5699 6341 0.546122 AAGTGAGTGTTGGAGTGGCA 59.454 50.000 0.00 0.00 0.00 4.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.