Multiple sequence alignment - TraesCS3B01G176000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G176000 chr3B 100.000 7141 0 0 1 7141 178261462 178268602 0.000000e+00 13188.0
1 TraesCS3B01G176000 chr3B 91.339 127 7 4 116 241 20552694 20552571 3.430000e-38 171.0
2 TraesCS3B01G176000 chr3B 100.000 35 0 0 6773 6807 178268196 178268230 1.660000e-06 65.8
3 TraesCS3B01G176000 chr3B 100.000 35 0 0 6735 6769 178268234 178268268 1.660000e-06 65.8
4 TraesCS3B01G176000 chr3D 92.979 4686 227 50 1540 6199 124077114 124081723 0.000000e+00 6737.0
5 TraesCS3B01G176000 chr3D 90.963 2357 124 38 1289 3621 124076885 124079176 0.000000e+00 3090.0
6 TraesCS3B01G176000 chr3D 89.726 1022 51 22 246 1220 124075872 124076886 0.000000e+00 1256.0
7 TraesCS3B01G176000 chr3D 89.335 947 60 11 6209 7141 124081701 124082620 0.000000e+00 1151.0
8 TraesCS3B01G176000 chr3D 97.436 39 1 0 6773 6811 124082216 124082254 4.620000e-07 67.6
9 TraesCS3B01G176000 chr3A 93.004 2044 84 23 4458 6474 131649797 131651808 0.000000e+00 2928.0
10 TraesCS3B01G176000 chr3A 89.927 2333 142 49 1295 3576 131646721 131649011 0.000000e+00 2920.0
11 TraesCS3B01G176000 chr3A 93.257 786 45 4 3644 4427 131649018 131649797 0.000000e+00 1151.0
12 TraesCS3B01G176000 chr3A 90.484 599 47 4 6472 7060 131651851 131652449 0.000000e+00 782.0
13 TraesCS3B01G176000 chr3A 85.202 642 38 30 656 1246 131646077 131646712 2.200000e-169 606.0
14 TraesCS3B01G176000 chr3A 88.219 365 31 4 242 595 131645691 131646054 6.620000e-115 425.0
15 TraesCS3B01G176000 chr3A 90.909 99 6 2 6423 6521 429325412 429325507 5.810000e-26 130.0
16 TraesCS3B01G176000 chr3A 94.118 51 3 0 7091 7141 131652450 131652500 2.140000e-10 78.7
17 TraesCS3B01G176000 chr5B 93.194 191 11 2 52 241 540869801 540869612 5.450000e-71 279.0
18 TraesCS3B01G176000 chr5B 93.617 188 11 1 58 244 642824656 642824843 5.450000e-71 279.0
19 TraesCS3B01G176000 chr5B 93.478 184 10 2 58 240 506524558 506524740 9.130000e-69 272.0
20 TraesCS3B01G176000 chr6B 91.979 187 13 2 58 243 676128732 676128917 1.980000e-65 261.0
21 TraesCS3B01G176000 chr6B 90.741 108 4 4 6427 6534 646750150 646750049 9.660000e-29 139.0
22 TraesCS3B01G176000 chr6B 92.000 100 3 4 6434 6531 13827526 13827622 1.250000e-27 135.0
23 TraesCS3B01G176000 chr7B 91.005 189 10 4 58 240 376428872 376429059 1.540000e-61 248.0
24 TraesCS3B01G176000 chr7B 96.364 110 3 1 132 241 689897627 689897519 5.690000e-41 180.0
25 TraesCS3B01G176000 chr7B 92.553 94 5 1 6428 6521 639796193 639796284 4.490000e-27 134.0
26 TraesCS3B01G176000 chr1B 90.476 126 9 3 116 240 300336707 300336830 5.730000e-36 163.0
27 TraesCS3B01G176000 chr2B 89.683 126 10 3 116 240 699087262 699087385 2.670000e-34 158.0
28 TraesCS3B01G176000 chr5A 94.624 93 2 2 6429 6521 450750796 450750707 2.690000e-29 141.0
29 TraesCS3B01G176000 chr1A 92.708 96 5 1 6434 6529 95850277 95850370 3.470000e-28 137.0
30 TraesCS3B01G176000 chr6D 92.632 95 4 2 6432 6526 427344853 427344944 4.490000e-27 134.0
31 TraesCS3B01G176000 chr2D 90.385 104 7 2 6418 6521 534925450 534925550 4.490000e-27 134.0
32 TraesCS3B01G176000 chr7A 97.059 68 2 0 5262 5329 616735066 616734999 1.630000e-21 115.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G176000 chr3B 178261462 178268602 7140 False 4439.866667 13188 100.000000 1 7141 3 chr3B.!!$F1 7140
1 TraesCS3B01G176000 chr3D 124075872 124082620 6748 False 2460.320000 6737 92.087800 246 7141 5 chr3D.!!$F1 6895
2 TraesCS3B01G176000 chr3A 131645691 131652500 6809 False 1270.100000 2928 90.601571 242 7141 7 chr3A.!!$F2 6899

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
152 153 0.108019 GTGGAGTCCGGTTGGTTTCT 59.892 55.0 4.30 0.00 36.30 2.52 F
1261 1349 0.172578 TGTTCTACGCGTATGCTGCT 59.827 50.0 20.91 0.00 39.65 4.24 F
2177 2278 0.179181 ACTGCGACGTACGTATGTGG 60.179 55.0 24.57 22.89 44.60 4.17 F
2182 2283 0.526954 GACGTACGTATGTGGCCTGG 60.527 60.0 24.57 0.00 0.00 4.45 F
3642 3785 0.242825 CACTGCTTTGTGCCCATCAG 59.757 55.0 0.00 0.00 42.00 2.90 F
3728 3871 0.465705 TCCCTGCATCGTCTTCATCC 59.534 55.0 0.00 0.00 0.00 3.51 F
4268 4416 1.012841 GGTCAGCAGCAGCAGATTAC 58.987 55.0 3.17 0.00 45.49 1.89 F
4873 5023 0.029567 CTCATCAGAGGTACGCCGTC 59.970 60.0 0.00 0.00 40.50 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1273 1361 0.164002 GAAAGTGGAAAGAGACGCGC 59.836 55.000 5.73 0.0 0.00 6.86 R
2673 2781 0.037605 ACGAGTTCATCACCGGTTCC 60.038 55.000 2.97 0.0 0.00 3.62 R
3633 3776 0.107066 CATACTGGTGCTGATGGGCA 60.107 55.000 0.00 0.0 40.15 5.36 R
3651 3794 0.544833 ATTCCATTGCCTGGTTGCCA 60.545 50.000 0.00 0.0 46.08 4.92 R
4626 4774 0.030504 TGCATGCCACGTTTCAACAG 59.969 50.000 16.68 0.0 0.00 3.16 R
4629 4777 0.038435 CCATGCATGCCACGTTTCAA 60.038 50.000 21.69 0.0 0.00 2.69 R
6013 6179 1.378762 CCGCTCCTTTTCCCCTTGA 59.621 57.895 0.00 0.0 0.00 3.02 R
6223 6397 2.644798 ACTTGTTCCCTGCTTATCCAGT 59.355 45.455 0.00 0.0 0.00 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.708210 TACCTGTGCCCTCTTCCG 58.292 61.111 0.00 0.00 0.00 4.30
18 19 2.656069 TACCTGTGCCCTCTTCCGC 61.656 63.158 0.00 0.00 0.00 5.54
19 20 4.785453 CCTGTGCCCTCTTCCGCC 62.785 72.222 0.00 0.00 0.00 6.13
20 21 4.020617 CTGTGCCCTCTTCCGCCA 62.021 66.667 0.00 0.00 0.00 5.69
21 22 3.965539 CTGTGCCCTCTTCCGCCAG 62.966 68.421 0.00 0.00 0.00 4.85
22 23 4.021925 GTGCCCTCTTCCGCCAGT 62.022 66.667 0.00 0.00 0.00 4.00
23 24 3.706373 TGCCCTCTTCCGCCAGTC 61.706 66.667 0.00 0.00 0.00 3.51
24 25 3.394836 GCCCTCTTCCGCCAGTCT 61.395 66.667 0.00 0.00 0.00 3.24
25 26 2.058595 GCCCTCTTCCGCCAGTCTA 61.059 63.158 0.00 0.00 0.00 2.59
26 27 1.403687 GCCCTCTTCCGCCAGTCTAT 61.404 60.000 0.00 0.00 0.00 1.98
27 28 0.390860 CCCTCTTCCGCCAGTCTATG 59.609 60.000 0.00 0.00 0.00 2.23
28 29 1.115467 CCTCTTCCGCCAGTCTATGT 58.885 55.000 0.00 0.00 0.00 2.29
29 30 2.307768 CCTCTTCCGCCAGTCTATGTA 58.692 52.381 0.00 0.00 0.00 2.29
30 31 2.693591 CCTCTTCCGCCAGTCTATGTAA 59.306 50.000 0.00 0.00 0.00 2.41
31 32 3.132289 CCTCTTCCGCCAGTCTATGTAAA 59.868 47.826 0.00 0.00 0.00 2.01
32 33 4.382685 CCTCTTCCGCCAGTCTATGTAAAA 60.383 45.833 0.00 0.00 0.00 1.52
33 34 4.501071 TCTTCCGCCAGTCTATGTAAAAC 58.499 43.478 0.00 0.00 0.00 2.43
34 35 2.883574 TCCGCCAGTCTATGTAAAACG 58.116 47.619 0.00 0.00 0.00 3.60
35 36 1.931172 CCGCCAGTCTATGTAAAACGG 59.069 52.381 0.00 0.00 0.00 4.44
36 37 2.417651 CCGCCAGTCTATGTAAAACGGA 60.418 50.000 0.00 0.00 40.49 4.69
37 38 3.255725 CGCCAGTCTATGTAAAACGGAA 58.744 45.455 0.00 0.00 0.00 4.30
38 39 3.306166 CGCCAGTCTATGTAAAACGGAAG 59.694 47.826 0.00 0.00 0.00 3.46
53 54 4.725790 ACGGAAGTTAACTAATACCGCT 57.274 40.909 27.23 18.31 46.40 5.52
54 55 4.676546 ACGGAAGTTAACTAATACCGCTC 58.323 43.478 27.23 13.93 46.40 5.03
55 56 4.400567 ACGGAAGTTAACTAATACCGCTCT 59.599 41.667 27.23 15.27 46.40 4.09
56 57 5.105595 ACGGAAGTTAACTAATACCGCTCTT 60.106 40.000 27.23 15.04 46.40 2.85
57 58 5.458126 CGGAAGTTAACTAATACCGCTCTTC 59.542 44.000 21.21 8.15 33.03 2.87
58 59 6.571605 GGAAGTTAACTAATACCGCTCTTCT 58.428 40.000 8.92 0.00 32.33 2.85
59 60 7.467811 CGGAAGTTAACTAATACCGCTCTTCTA 60.468 40.741 21.21 0.00 33.03 2.10
60 61 7.647318 GGAAGTTAACTAATACCGCTCTTCTAC 59.353 40.741 8.92 0.00 32.33 2.59
61 62 7.878547 AGTTAACTAATACCGCTCTTCTACT 57.121 36.000 6.26 0.00 0.00 2.57
62 63 8.291191 AGTTAACTAATACCGCTCTTCTACTT 57.709 34.615 6.26 0.00 0.00 2.24
63 64 8.747471 AGTTAACTAATACCGCTCTTCTACTTT 58.253 33.333 6.26 0.00 0.00 2.66
64 65 9.363763 GTTAACTAATACCGCTCTTCTACTTTT 57.636 33.333 0.00 0.00 0.00 2.27
65 66 7.829378 AACTAATACCGCTCTTCTACTTTTG 57.171 36.000 0.00 0.00 0.00 2.44
66 67 5.811100 ACTAATACCGCTCTTCTACTTTTGC 59.189 40.000 0.00 0.00 0.00 3.68
67 68 2.841442 ACCGCTCTTCTACTTTTGCT 57.159 45.000 0.00 0.00 0.00 3.91
68 69 3.127425 ACCGCTCTTCTACTTTTGCTT 57.873 42.857 0.00 0.00 0.00 3.91
69 70 3.067833 ACCGCTCTTCTACTTTTGCTTC 58.932 45.455 0.00 0.00 0.00 3.86
70 71 3.244249 ACCGCTCTTCTACTTTTGCTTCT 60.244 43.478 0.00 0.00 0.00 2.85
71 72 3.124297 CCGCTCTTCTACTTTTGCTTCTG 59.876 47.826 0.00 0.00 0.00 3.02
72 73 3.990469 CGCTCTTCTACTTTTGCTTCTGA 59.010 43.478 0.00 0.00 0.00 3.27
73 74 4.091220 CGCTCTTCTACTTTTGCTTCTGAG 59.909 45.833 0.00 0.00 0.00 3.35
74 75 4.994217 GCTCTTCTACTTTTGCTTCTGAGT 59.006 41.667 0.00 0.00 0.00 3.41
75 76 5.468409 GCTCTTCTACTTTTGCTTCTGAGTT 59.532 40.000 0.00 0.00 0.00 3.01
76 77 6.565623 GCTCTTCTACTTTTGCTTCTGAGTTG 60.566 42.308 0.00 0.00 0.00 3.16
77 78 6.349300 TCTTCTACTTTTGCTTCTGAGTTGT 58.651 36.000 0.00 0.00 0.00 3.32
78 79 6.823689 TCTTCTACTTTTGCTTCTGAGTTGTT 59.176 34.615 0.00 0.00 0.00 2.83
79 80 6.363577 TCTACTTTTGCTTCTGAGTTGTTG 57.636 37.500 0.00 0.00 0.00 3.33
80 81 5.880332 TCTACTTTTGCTTCTGAGTTGTTGT 59.120 36.000 0.00 0.00 0.00 3.32
81 82 7.045416 TCTACTTTTGCTTCTGAGTTGTTGTA 58.955 34.615 0.00 0.00 0.00 2.41
82 83 6.509418 ACTTTTGCTTCTGAGTTGTTGTAA 57.491 33.333 0.00 0.00 0.00 2.41
83 84 7.100458 ACTTTTGCTTCTGAGTTGTTGTAAT 57.900 32.000 0.00 0.00 0.00 1.89
84 85 6.974622 ACTTTTGCTTCTGAGTTGTTGTAATG 59.025 34.615 0.00 0.00 0.00 1.90
85 86 5.437289 TTGCTTCTGAGTTGTTGTAATGG 57.563 39.130 0.00 0.00 0.00 3.16
86 87 3.253188 TGCTTCTGAGTTGTTGTAATGGC 59.747 43.478 0.00 0.00 0.00 4.40
87 88 3.503748 GCTTCTGAGTTGTTGTAATGGCT 59.496 43.478 0.00 0.00 0.00 4.75
88 89 4.378874 GCTTCTGAGTTGTTGTAATGGCTC 60.379 45.833 0.00 0.00 0.00 4.70
89 90 4.623932 TCTGAGTTGTTGTAATGGCTCT 57.376 40.909 0.00 0.00 0.00 4.09
90 91 4.973168 TCTGAGTTGTTGTAATGGCTCTT 58.027 39.130 0.00 0.00 0.00 2.85
91 92 6.109156 TCTGAGTTGTTGTAATGGCTCTTA 57.891 37.500 0.00 0.00 0.00 2.10
92 93 6.166279 TCTGAGTTGTTGTAATGGCTCTTAG 58.834 40.000 0.00 0.00 0.00 2.18
93 94 5.245531 TGAGTTGTTGTAATGGCTCTTAGG 58.754 41.667 0.00 0.00 0.00 2.69
94 95 4.589908 AGTTGTTGTAATGGCTCTTAGGG 58.410 43.478 0.00 0.00 0.00 3.53
95 96 4.042934 AGTTGTTGTAATGGCTCTTAGGGT 59.957 41.667 0.00 0.00 0.00 4.34
96 97 5.249852 AGTTGTTGTAATGGCTCTTAGGGTA 59.750 40.000 0.00 0.00 0.00 3.69
97 98 5.353394 TGTTGTAATGGCTCTTAGGGTAG 57.647 43.478 0.00 0.00 0.00 3.18
98 99 4.781087 TGTTGTAATGGCTCTTAGGGTAGT 59.219 41.667 0.00 0.00 0.00 2.73
99 100 5.249852 TGTTGTAATGGCTCTTAGGGTAGTT 59.750 40.000 0.00 0.00 0.00 2.24
100 101 6.178324 GTTGTAATGGCTCTTAGGGTAGTTT 58.822 40.000 0.00 0.00 0.00 2.66
101 102 5.741011 TGTAATGGCTCTTAGGGTAGTTTG 58.259 41.667 0.00 0.00 0.00 2.93
102 103 5.486063 TGTAATGGCTCTTAGGGTAGTTTGA 59.514 40.000 0.00 0.00 0.00 2.69
103 104 5.514500 AATGGCTCTTAGGGTAGTTTGAA 57.486 39.130 0.00 0.00 0.00 2.69
104 105 5.717119 ATGGCTCTTAGGGTAGTTTGAAT 57.283 39.130 0.00 0.00 0.00 2.57
105 106 5.514500 TGGCTCTTAGGGTAGTTTGAATT 57.486 39.130 0.00 0.00 0.00 2.17
106 107 5.497474 TGGCTCTTAGGGTAGTTTGAATTC 58.503 41.667 0.00 0.00 0.00 2.17
107 108 4.571176 GGCTCTTAGGGTAGTTTGAATTCG 59.429 45.833 0.04 0.00 0.00 3.34
108 109 4.571176 GCTCTTAGGGTAGTTTGAATTCGG 59.429 45.833 0.04 0.00 0.00 4.30
109 110 5.731591 CTCTTAGGGTAGTTTGAATTCGGT 58.268 41.667 0.04 0.00 0.00 4.69
110 111 5.727434 TCTTAGGGTAGTTTGAATTCGGTC 58.273 41.667 0.04 0.00 0.00 4.79
111 112 5.482878 TCTTAGGGTAGTTTGAATTCGGTCT 59.517 40.000 0.04 1.62 0.00 3.85
112 113 3.939066 AGGGTAGTTTGAATTCGGTCTG 58.061 45.455 0.04 0.00 0.00 3.51
113 114 2.418976 GGGTAGTTTGAATTCGGTCTGC 59.581 50.000 0.04 2.63 0.00 4.26
114 115 2.418976 GGTAGTTTGAATTCGGTCTGCC 59.581 50.000 12.11 12.11 0.00 4.85
126 127 2.327200 GGTCTGCCGGTTAGCTATTT 57.673 50.000 1.90 0.00 0.00 1.40
127 128 1.940613 GGTCTGCCGGTTAGCTATTTG 59.059 52.381 1.90 0.00 0.00 2.32
128 129 2.419574 GGTCTGCCGGTTAGCTATTTGA 60.420 50.000 1.90 0.00 0.00 2.69
129 130 3.467803 GTCTGCCGGTTAGCTATTTGAT 58.532 45.455 1.90 0.00 0.00 2.57
130 131 3.495001 GTCTGCCGGTTAGCTATTTGATC 59.505 47.826 1.90 0.00 0.00 2.92
131 132 2.808543 CTGCCGGTTAGCTATTTGATCC 59.191 50.000 1.90 0.00 0.00 3.36
132 133 2.438021 TGCCGGTTAGCTATTTGATCCT 59.562 45.455 1.90 0.00 0.00 3.24
133 134 2.808543 GCCGGTTAGCTATTTGATCCTG 59.191 50.000 1.90 0.00 0.00 3.86
134 135 3.744530 GCCGGTTAGCTATTTGATCCTGT 60.745 47.826 1.90 0.00 0.00 4.00
135 136 3.809832 CCGGTTAGCTATTTGATCCTGTG 59.190 47.826 0.00 0.00 0.00 3.66
136 137 3.809832 CGGTTAGCTATTTGATCCTGTGG 59.190 47.826 0.00 0.00 0.00 4.17
137 138 4.442893 CGGTTAGCTATTTGATCCTGTGGA 60.443 45.833 0.00 0.00 35.55 4.02
138 139 5.059833 GGTTAGCTATTTGATCCTGTGGAG 58.940 45.833 0.00 0.00 34.05 3.86
139 140 5.396884 GGTTAGCTATTTGATCCTGTGGAGT 60.397 44.000 0.00 0.00 34.05 3.85
140 141 4.414337 AGCTATTTGATCCTGTGGAGTC 57.586 45.455 0.00 0.00 34.05 3.36
141 142 3.135530 AGCTATTTGATCCTGTGGAGTCC 59.864 47.826 0.73 0.73 34.05 3.85
142 143 2.698855 ATTTGATCCTGTGGAGTCCG 57.301 50.000 4.30 0.00 34.05 4.79
143 144 0.613260 TTTGATCCTGTGGAGTCCGG 59.387 55.000 4.30 0.00 34.05 5.14
144 145 0.544357 TTGATCCTGTGGAGTCCGGT 60.544 55.000 4.30 0.00 34.05 5.28
145 146 0.544357 TGATCCTGTGGAGTCCGGTT 60.544 55.000 4.30 0.00 34.05 4.44
146 147 0.108138 GATCCTGTGGAGTCCGGTTG 60.108 60.000 4.30 0.00 34.05 3.77
147 148 1.553690 ATCCTGTGGAGTCCGGTTGG 61.554 60.000 4.30 4.43 34.05 3.77
148 149 2.516888 CCTGTGGAGTCCGGTTGGT 61.517 63.158 4.30 0.00 36.30 3.67
149 150 1.450211 CTGTGGAGTCCGGTTGGTT 59.550 57.895 4.30 0.00 36.30 3.67
150 151 0.179029 CTGTGGAGTCCGGTTGGTTT 60.179 55.000 4.30 0.00 36.30 3.27
151 152 0.179040 TGTGGAGTCCGGTTGGTTTC 60.179 55.000 4.30 0.00 36.30 2.78
152 153 0.108019 GTGGAGTCCGGTTGGTTTCT 59.892 55.000 4.30 0.00 36.30 2.52
153 154 0.841289 TGGAGTCCGGTTGGTTTCTT 59.159 50.000 4.30 0.00 36.30 2.52
154 155 1.213430 TGGAGTCCGGTTGGTTTCTTT 59.787 47.619 4.30 0.00 36.30 2.52
155 156 1.878088 GGAGTCCGGTTGGTTTCTTTC 59.122 52.381 0.00 0.00 36.30 2.62
156 157 1.529865 GAGTCCGGTTGGTTTCTTTCG 59.470 52.381 0.00 0.00 36.30 3.46
157 158 1.134310 AGTCCGGTTGGTTTCTTTCGT 60.134 47.619 0.00 0.00 36.30 3.85
158 159 1.672363 GTCCGGTTGGTTTCTTTCGTT 59.328 47.619 0.00 0.00 36.30 3.85
159 160 2.097954 GTCCGGTTGGTTTCTTTCGTTT 59.902 45.455 0.00 0.00 36.30 3.60
160 161 3.312146 GTCCGGTTGGTTTCTTTCGTTTA 59.688 43.478 0.00 0.00 36.30 2.01
161 162 3.312146 TCCGGTTGGTTTCTTTCGTTTAC 59.688 43.478 0.00 0.00 36.30 2.01
162 163 3.313249 CCGGTTGGTTTCTTTCGTTTACT 59.687 43.478 0.00 0.00 0.00 2.24
163 164 4.201940 CCGGTTGGTTTCTTTCGTTTACTT 60.202 41.667 0.00 0.00 0.00 2.24
164 165 5.334319 CGGTTGGTTTCTTTCGTTTACTTT 58.666 37.500 0.00 0.00 0.00 2.66
165 166 5.453266 CGGTTGGTTTCTTTCGTTTACTTTC 59.547 40.000 0.00 0.00 0.00 2.62
166 167 5.453266 GGTTGGTTTCTTTCGTTTACTTTCG 59.547 40.000 0.00 0.00 0.00 3.46
167 168 6.250089 GTTGGTTTCTTTCGTTTACTTTCGA 58.750 36.000 0.00 0.00 0.00 3.71
168 169 6.419980 TGGTTTCTTTCGTTTACTTTCGAA 57.580 33.333 0.00 0.00 42.82 3.71
169 170 6.250089 TGGTTTCTTTCGTTTACTTTCGAAC 58.750 36.000 0.00 0.00 43.89 3.95
170 171 6.092533 TGGTTTCTTTCGTTTACTTTCGAACT 59.907 34.615 0.00 0.00 43.89 3.01
171 172 6.626488 GGTTTCTTTCGTTTACTTTCGAACTC 59.374 38.462 0.00 0.00 43.89 3.01
172 173 7.397194 GTTTCTTTCGTTTACTTTCGAACTCT 58.603 34.615 0.00 0.00 43.89 3.24
173 174 7.529880 TTCTTTCGTTTACTTTCGAACTCTT 57.470 32.000 0.00 0.00 43.89 2.85
174 175 7.529880 TCTTTCGTTTACTTTCGAACTCTTT 57.470 32.000 0.00 0.00 43.89 2.52
175 176 8.633075 TCTTTCGTTTACTTTCGAACTCTTTA 57.367 30.769 0.00 0.00 43.89 1.85
176 177 9.252962 TCTTTCGTTTACTTTCGAACTCTTTAT 57.747 29.630 0.00 0.00 43.89 1.40
179 180 9.897744 TTCGTTTACTTTCGAACTCTTTATAGA 57.102 29.630 0.00 0.00 40.34 1.98
180 181 9.897744 TCGTTTACTTTCGAACTCTTTATAGAA 57.102 29.630 0.00 0.00 33.13 2.10
181 182 9.934641 CGTTTACTTTCGAACTCTTTATAGAAC 57.065 33.333 0.00 0.00 0.00 3.01
185 186 8.522178 ACTTTCGAACTCTTTATAGAACTGTG 57.478 34.615 0.00 0.00 0.00 3.66
186 187 8.142551 ACTTTCGAACTCTTTATAGAACTGTGT 58.857 33.333 0.00 0.00 0.00 3.72
187 188 7.869016 TTCGAACTCTTTATAGAACTGTGTG 57.131 36.000 0.00 0.00 0.00 3.82
188 189 6.387465 TCGAACTCTTTATAGAACTGTGTGG 58.613 40.000 0.00 0.00 0.00 4.17
189 190 6.015688 TCGAACTCTTTATAGAACTGTGTGGT 60.016 38.462 0.00 0.00 0.00 4.16
190 191 6.645415 CGAACTCTTTATAGAACTGTGTGGTT 59.355 38.462 0.00 0.00 0.00 3.67
191 192 7.170998 CGAACTCTTTATAGAACTGTGTGGTTT 59.829 37.037 0.00 0.00 0.00 3.27
192 193 8.747538 AACTCTTTATAGAACTGTGTGGTTTT 57.252 30.769 0.00 0.00 0.00 2.43
193 194 8.379457 ACTCTTTATAGAACTGTGTGGTTTTC 57.621 34.615 0.00 0.00 0.00 2.29
194 195 7.990886 ACTCTTTATAGAACTGTGTGGTTTTCA 59.009 33.333 0.00 0.00 0.00 2.69
195 196 8.378172 TCTTTATAGAACTGTGTGGTTTTCAG 57.622 34.615 0.00 0.00 35.60 3.02
196 197 7.990886 TCTTTATAGAACTGTGTGGTTTTCAGT 59.009 33.333 0.00 0.00 43.04 3.41
197 198 9.268268 CTTTATAGAACTGTGTGGTTTTCAGTA 57.732 33.333 0.00 0.00 40.81 2.74
198 199 9.616156 TTTATAGAACTGTGTGGTTTTCAGTAA 57.384 29.630 0.00 0.00 40.81 2.24
199 200 9.787435 TTATAGAACTGTGTGGTTTTCAGTAAT 57.213 29.630 0.00 0.00 40.81 1.89
200 201 6.377327 AGAACTGTGTGGTTTTCAGTAATG 57.623 37.500 0.00 0.00 40.81 1.90
201 202 6.119536 AGAACTGTGTGGTTTTCAGTAATGA 58.880 36.000 0.00 0.00 40.81 2.57
202 203 6.601613 AGAACTGTGTGGTTTTCAGTAATGAA 59.398 34.615 0.56 0.56 40.81 2.57
203 204 6.767524 ACTGTGTGGTTTTCAGTAATGAAA 57.232 33.333 13.98 13.98 40.06 2.69
204 205 7.164230 ACTGTGTGGTTTTCAGTAATGAAAA 57.836 32.000 23.18 23.18 43.10 2.29
205 206 7.781056 ACTGTGTGGTTTTCAGTAATGAAAAT 58.219 30.769 27.81 11.42 45.67 1.82
206 207 7.920682 ACTGTGTGGTTTTCAGTAATGAAAATC 59.079 33.333 27.81 27.28 45.67 2.17
207 208 6.915300 TGTGTGGTTTTCAGTAATGAAAATCG 59.085 34.615 27.81 0.00 46.34 3.34
208 209 7.136119 GTGTGGTTTTCAGTAATGAAAATCGA 58.864 34.615 27.81 17.69 46.34 3.59
209 210 7.646130 GTGTGGTTTTCAGTAATGAAAATCGAA 59.354 33.333 27.81 18.63 46.34 3.71
210 211 8.191446 TGTGGTTTTCAGTAATGAAAATCGAAA 58.809 29.630 27.81 16.62 46.34 3.46
211 212 8.690840 GTGGTTTTCAGTAATGAAAATCGAAAG 58.309 33.333 27.81 0.00 46.34 2.62
212 213 7.865385 TGGTTTTCAGTAATGAAAATCGAAAGG 59.135 33.333 27.81 0.00 46.34 3.11
213 214 7.328493 GGTTTTCAGTAATGAAAATCGAAAGGG 59.672 37.037 27.81 0.00 45.67 3.95
214 215 6.509418 TTCAGTAATGAAAATCGAAAGGGG 57.491 37.500 2.54 0.00 0.00 4.79
215 216 4.398044 TCAGTAATGAAAATCGAAAGGGGC 59.602 41.667 0.00 0.00 0.00 5.80
216 217 4.157656 CAGTAATGAAAATCGAAAGGGGCA 59.842 41.667 0.00 0.00 0.00 5.36
217 218 4.770010 AGTAATGAAAATCGAAAGGGGCAA 59.230 37.500 0.00 0.00 0.00 4.52
218 219 3.874392 ATGAAAATCGAAAGGGGCAAG 57.126 42.857 0.00 0.00 0.00 4.01
219 220 1.272212 TGAAAATCGAAAGGGGCAAGC 59.728 47.619 0.00 0.00 0.00 4.01
220 221 0.608130 AAAATCGAAAGGGGCAAGCC 59.392 50.000 1.52 1.52 0.00 4.35
232 233 1.549203 GGCAAGCCCTTCTTTGATGA 58.451 50.000 0.00 0.00 31.27 2.92
233 234 1.895131 GGCAAGCCCTTCTTTGATGAA 59.105 47.619 0.00 0.00 31.27 2.57
234 235 2.299867 GGCAAGCCCTTCTTTGATGAAA 59.700 45.455 0.00 0.00 31.27 2.69
235 236 3.244181 GGCAAGCCCTTCTTTGATGAAAA 60.244 43.478 0.00 0.00 31.27 2.29
236 237 4.379652 GCAAGCCCTTCTTTGATGAAAAA 58.620 39.130 0.00 0.00 31.27 1.94
339 347 1.490490 TCCCCAATCACTGGCTGATAC 59.510 52.381 0.00 0.00 44.90 2.24
341 349 1.586422 CCAATCACTGGCTGATACCG 58.414 55.000 0.00 0.00 38.82 4.02
361 369 2.103373 GTATCCTCAGTCACTGGCTCA 58.897 52.381 4.57 0.00 31.51 4.26
372 380 4.892002 TGGCTCATATGGCAGCAG 57.108 55.556 15.93 2.03 37.38 4.24
403 411 2.202987 GCTCGAGCACCTCCATGG 60.203 66.667 31.91 4.97 41.59 3.66
415 423 2.449464 CCTCCATGGTTGATTGCTGAA 58.551 47.619 12.58 0.00 0.00 3.02
424 432 3.730715 GGTTGATTGCTGAAGTTTTGTCG 59.269 43.478 0.00 0.00 0.00 4.35
469 477 2.433604 CAGTATCTGTCAGTCCCATGCT 59.566 50.000 0.00 0.00 0.00 3.79
507 515 7.755373 GCTAAACTCAACTGTTGTTTCTTCTTT 59.245 33.333 19.12 9.83 35.77 2.52
508 516 9.626045 CTAAACTCAACTGTTGTTTCTTCTTTT 57.374 29.630 19.12 10.37 35.77 2.27
536 544 4.021104 TGTTGGAGATTTCACGAGACAGAT 60.021 41.667 0.00 0.00 0.00 2.90
545 557 2.238898 TCACGAGACAGATACAGGGAGA 59.761 50.000 0.00 0.00 0.00 3.71
595 607 2.887568 CGCAGCCATCCACGAGAC 60.888 66.667 0.00 0.00 0.00 3.36
605 617 0.677098 TCCACGAGACGAGAGGAAGG 60.677 60.000 0.00 0.00 0.00 3.46
617 643 4.221041 ACGAGAGGAAGGGAGAAAAACTAG 59.779 45.833 0.00 0.00 0.00 2.57
618 644 4.509616 GAGAGGAAGGGAGAAAAACTAGC 58.490 47.826 0.00 0.00 0.00 3.42
619 645 4.172020 AGAGGAAGGGAGAAAAACTAGCT 58.828 43.478 0.00 0.00 0.00 3.32
620 646 5.342866 AGAGGAAGGGAGAAAAACTAGCTA 58.657 41.667 0.00 0.00 0.00 3.32
621 647 5.423931 AGAGGAAGGGAGAAAAACTAGCTAG 59.576 44.000 19.44 19.44 0.00 3.42
622 648 5.095097 AGGAAGGGAGAAAAACTAGCTAGT 58.905 41.667 20.95 20.95 38.39 2.57
643 669 4.347000 AGTGCTTAGTAGAAACAAGGGACA 59.653 41.667 0.00 0.00 0.00 4.02
677 703 1.841919 TGGTCCTCATGTGCATCATCT 59.158 47.619 0.00 0.00 34.09 2.90
841 893 3.639033 TCCAGGGGGAGCGTTAATA 57.361 52.632 0.00 0.00 38.64 0.98
956 1026 0.757188 GCTGCTAGTGCTCTCCCCTA 60.757 60.000 0.00 0.00 40.48 3.53
987 1060 2.029020 TGCAACACCTAGTAGCTGACTG 60.029 50.000 0.00 0.00 39.39 3.51
992 1065 1.358103 ACCTAGTAGCTGACTGTGGGA 59.642 52.381 0.00 0.00 39.39 4.37
1096 1183 3.444805 GCGACGTCTCCCTCAGCT 61.445 66.667 14.70 0.00 0.00 4.24
1222 1310 2.122768 AGGTAAGAAGCTCCATCTGGG 58.877 52.381 0.00 0.00 35.41 4.45
1224 1312 2.158885 GGTAAGAAGCTCCATCTGGGTC 60.159 54.545 0.00 0.00 38.11 4.46
1228 1316 4.554036 GCTCCATCTGGGTCCCGC 62.554 72.222 2.65 0.00 38.11 6.13
1246 1334 2.280186 CCCCGGCGCTCTATGTTC 60.280 66.667 7.64 0.00 0.00 3.18
1247 1335 2.797278 CCCCGGCGCTCTATGTTCT 61.797 63.158 7.64 0.00 0.00 3.01
1249 1337 0.318784 CCCGGCGCTCTATGTTCTAC 60.319 60.000 7.64 0.00 0.00 2.59
1250 1338 0.660595 CCGGCGCTCTATGTTCTACG 60.661 60.000 7.64 0.00 0.00 3.51
1251 1339 1.269444 CGGCGCTCTATGTTCTACGC 61.269 60.000 7.64 0.00 45.19 4.42
1252 1340 1.269444 GGCGCTCTATGTTCTACGCG 61.269 60.000 7.64 3.53 46.75 6.01
1253 1341 0.591741 GCGCTCTATGTTCTACGCGT 60.592 55.000 19.17 19.17 42.25 6.01
1254 1342 1.333524 GCGCTCTATGTTCTACGCGTA 60.334 52.381 19.40 19.40 42.25 4.42
1255 1343 2.664971 GCGCTCTATGTTCTACGCGTAT 60.665 50.000 20.91 8.15 42.25 3.06
1256 1344 2.903095 CGCTCTATGTTCTACGCGTATG 59.097 50.000 20.91 13.75 36.28 2.39
1257 1345 2.657372 GCTCTATGTTCTACGCGTATGC 59.343 50.000 20.91 12.95 37.91 3.14
1258 1346 3.609644 GCTCTATGTTCTACGCGTATGCT 60.610 47.826 20.91 5.87 39.65 3.79
1259 1347 3.885358 TCTATGTTCTACGCGTATGCTG 58.115 45.455 20.91 8.23 39.65 4.41
1260 1348 1.209128 ATGTTCTACGCGTATGCTGC 58.791 50.000 20.91 9.14 39.65 5.25
1261 1349 0.172578 TGTTCTACGCGTATGCTGCT 59.827 50.000 20.91 0.00 39.65 4.24
1262 1350 1.278238 GTTCTACGCGTATGCTGCTT 58.722 50.000 20.91 0.00 39.65 3.91
1263 1351 1.659098 GTTCTACGCGTATGCTGCTTT 59.341 47.619 20.91 0.00 39.65 3.51
1264 1352 1.277326 TCTACGCGTATGCTGCTTTG 58.723 50.000 20.91 4.68 39.65 2.77
1265 1353 0.315382 CTACGCGTATGCTGCTTTGC 60.315 55.000 20.91 2.01 39.65 3.68
1266 1354 0.739462 TACGCGTATGCTGCTTTGCT 60.739 50.000 16.41 0.00 39.65 3.91
1267 1355 1.135315 CGCGTATGCTGCTTTGCTT 59.865 52.632 5.20 0.00 39.65 3.91
1268 1356 0.454957 CGCGTATGCTGCTTTGCTTT 60.455 50.000 5.20 0.00 39.65 3.51
1269 1357 0.986992 GCGTATGCTGCTTTGCTTTG 59.013 50.000 0.00 0.00 38.39 2.77
1270 1358 0.986992 CGTATGCTGCTTTGCTTTGC 59.013 50.000 0.00 0.00 0.00 3.68
1271 1359 1.666599 CGTATGCTGCTTTGCTTTGCA 60.667 47.619 0.00 0.00 36.47 4.08
1272 1360 1.723003 GTATGCTGCTTTGCTTTGCAC 59.277 47.619 0.00 0.00 38.71 4.57
1273 1361 0.942410 ATGCTGCTTTGCTTTGCACG 60.942 50.000 0.00 0.00 38.71 5.34
1274 1362 2.935446 GCTGCTTTGCTTTGCACGC 61.935 57.895 0.32 0.32 38.71 5.34
1275 1363 2.641783 CTGCTTTGCTTTGCACGCG 61.642 57.895 3.53 3.53 38.71 6.01
1276 1364 4.050719 GCTTTGCTTTGCACGCGC 62.051 61.111 5.73 0.00 38.71 6.86
1277 1365 3.745230 CTTTGCTTTGCACGCGCG 61.745 61.111 30.96 30.96 42.97 6.86
1278 1366 4.544689 TTTGCTTTGCACGCGCGT 62.545 55.556 32.73 32.73 42.97 6.01
1279 1367 4.954680 TTGCTTTGCACGCGCGTC 62.955 61.111 35.61 26.46 42.97 5.19
1282 1370 3.406361 CTTTGCACGCGCGTCTCT 61.406 61.111 35.61 9.14 42.97 3.10
1283 1371 2.943345 CTTTGCACGCGCGTCTCTT 61.943 57.895 35.61 8.65 42.97 2.85
1284 1372 2.430080 CTTTGCACGCGCGTCTCTTT 62.430 55.000 35.61 7.71 42.97 2.52
1285 1373 2.424576 TTTGCACGCGCGTCTCTTTC 62.425 55.000 35.61 17.36 42.97 2.62
1286 1374 4.135493 GCACGCGCGTCTCTTTCC 62.135 66.667 35.61 11.29 0.00 3.13
1287 1375 2.733218 CACGCGCGTCTCTTTCCA 60.733 61.111 35.61 0.00 0.00 3.53
1309 1397 5.051106 CCACTTTCGAATTTTGAACGCATTT 60.051 36.000 0.00 0.00 0.00 2.32
1348 1436 4.377431 CGTGCTCATTTAGTCAGGTTCAAC 60.377 45.833 0.00 0.00 0.00 3.18
1360 1448 2.744202 CAGGTTCAACCAGAGAAATCCG 59.256 50.000 9.90 0.00 41.95 4.18
1385 1475 2.158900 ACATCCTAGCTTCCGGACAATG 60.159 50.000 1.83 3.08 30.90 2.82
1414 1507 7.866393 AGTTTACAGTTAGTAGTACAGCACTTG 59.134 37.037 2.52 0.00 38.80 3.16
1473 1566 6.739112 TGTACGAGATGAATGATTCTACAGG 58.261 40.000 6.73 0.00 0.00 4.00
1479 1572 6.002704 AGATGAATGATTCTACAGGGCAATC 58.997 40.000 6.73 0.00 0.00 2.67
1493 1586 2.490991 GGCAATCCATTACTACCGGTC 58.509 52.381 12.40 0.00 0.00 4.79
1517 1610 5.523916 CCAGTAATTCTCACCGGTCAAATAG 59.476 44.000 2.59 0.00 0.00 1.73
1530 1623 9.083080 CACCGGTCAAATAGAATTTAAAATTCC 57.917 33.333 2.59 0.00 0.00 3.01
1531 1624 8.808092 ACCGGTCAAATAGAATTTAAAATTCCA 58.192 29.630 0.00 0.00 0.00 3.53
1785 1879 1.153329 ACGCAGTTGGACGGTGAAA 60.153 52.632 0.00 0.00 37.78 2.69
1853 1947 2.111999 TTGCAGGACTCAAGGACGGG 62.112 60.000 0.00 0.00 0.00 5.28
1907 2001 3.267860 GGATCAGGAAGCAGCGCG 61.268 66.667 0.00 0.00 0.00 6.86
1952 2046 4.658063 CCTGGGATGTTGGTTAAGTAACA 58.342 43.478 6.85 6.85 40.65 2.41
1954 2048 5.050126 TGGGATGTTGGTTAAGTAACACA 57.950 39.130 6.60 1.12 39.36 3.72
1955 2049 5.636123 TGGGATGTTGGTTAAGTAACACAT 58.364 37.500 6.60 6.80 39.36 3.21
1956 2050 5.708230 TGGGATGTTGGTTAAGTAACACATC 59.292 40.000 17.91 17.91 42.63 3.06
1957 2051 5.708230 GGGATGTTGGTTAAGTAACACATCA 59.292 40.000 22.89 14.94 43.77 3.07
1958 2052 6.207810 GGGATGTTGGTTAAGTAACACATCAA 59.792 38.462 22.89 9.89 43.77 2.57
1959 2053 7.093945 GGGATGTTGGTTAAGTAACACATCAAT 60.094 37.037 22.89 5.59 43.77 2.57
1965 2059 8.556213 TGGTTAAGTAACACATCAATTAGACC 57.444 34.615 3.75 0.00 37.92 3.85
1966 2060 7.608761 TGGTTAAGTAACACATCAATTAGACCC 59.391 37.037 3.75 0.00 37.92 4.46
1968 2062 8.448615 GTTAAGTAACACATCAATTAGACCCAC 58.551 37.037 0.00 0.00 36.25 4.61
1984 2085 0.323725 CCACCCAACCTAGCTGCAAT 60.324 55.000 1.02 0.00 0.00 3.56
1985 2086 0.813184 CACCCAACCTAGCTGCAATG 59.187 55.000 1.02 0.00 0.00 2.82
1987 2088 0.813184 CCCAACCTAGCTGCAATGTG 59.187 55.000 1.02 0.00 0.00 3.21
1988 2089 1.538047 CCAACCTAGCTGCAATGTGT 58.462 50.000 1.02 0.00 0.00 3.72
1990 2091 2.679837 CCAACCTAGCTGCAATGTGTAG 59.320 50.000 1.02 0.00 33.01 2.74
1991 2092 3.338249 CAACCTAGCTGCAATGTGTAGT 58.662 45.455 1.02 0.00 32.42 2.73
1992 2093 3.252974 ACCTAGCTGCAATGTGTAGTC 57.747 47.619 1.02 0.00 32.42 2.59
1993 2094 2.567169 ACCTAGCTGCAATGTGTAGTCA 59.433 45.455 1.02 0.00 32.42 3.41
1995 2096 1.432514 AGCTGCAATGTGTAGTCACG 58.567 50.000 1.02 0.00 46.49 4.35
1996 2097 1.000843 AGCTGCAATGTGTAGTCACGA 59.999 47.619 1.02 0.00 46.49 4.35
1997 2098 1.798223 GCTGCAATGTGTAGTCACGAA 59.202 47.619 0.00 0.00 46.49 3.85
1998 2099 2.416547 GCTGCAATGTGTAGTCACGAAT 59.583 45.455 0.00 0.00 46.49 3.34
1999 2100 3.484229 GCTGCAATGTGTAGTCACGAATC 60.484 47.826 0.00 0.00 46.49 2.52
2000 2101 3.925379 TGCAATGTGTAGTCACGAATCT 58.075 40.909 0.00 0.00 46.49 2.40
2001 2102 3.679502 TGCAATGTGTAGTCACGAATCTG 59.320 43.478 0.00 0.00 46.49 2.90
2002 2103 3.926527 GCAATGTGTAGTCACGAATCTGA 59.073 43.478 0.00 0.00 46.49 3.27
2003 2104 4.388773 GCAATGTGTAGTCACGAATCTGAA 59.611 41.667 0.00 0.00 46.49 3.02
2004 2105 5.063944 GCAATGTGTAGTCACGAATCTGAAT 59.936 40.000 0.00 0.00 46.49 2.57
2005 2106 6.472680 CAATGTGTAGTCACGAATCTGAATG 58.527 40.000 0.00 0.00 46.49 2.67
2006 2107 5.134202 TGTGTAGTCACGAATCTGAATGT 57.866 39.130 0.00 0.00 46.49 2.71
2007 2108 4.923281 TGTGTAGTCACGAATCTGAATGTG 59.077 41.667 0.00 2.12 46.49 3.21
2008 2109 4.923871 GTGTAGTCACGAATCTGAATGTGT 59.076 41.667 0.00 0.00 34.79 3.72
2010 2111 4.527509 AGTCACGAATCTGAATGTGTCT 57.472 40.909 0.00 4.90 34.08 3.41
2011 2112 4.240888 AGTCACGAATCTGAATGTGTCTG 58.759 43.478 0.00 0.00 31.30 3.51
2012 2113 2.995939 TCACGAATCTGAATGTGTCTGC 59.004 45.455 0.00 0.00 34.08 4.26
2013 2114 1.995484 ACGAATCTGAATGTGTCTGCG 59.005 47.619 0.00 0.00 0.00 5.18
2014 2115 2.262211 CGAATCTGAATGTGTCTGCGA 58.738 47.619 0.00 0.00 0.00 5.10
2015 2116 2.862536 CGAATCTGAATGTGTCTGCGAT 59.137 45.455 0.00 0.00 0.00 4.58
2016 2117 3.302286 CGAATCTGAATGTGTCTGCGATG 60.302 47.826 0.00 0.00 0.00 3.84
2017 2118 2.749280 TCTGAATGTGTCTGCGATGT 57.251 45.000 0.00 0.00 0.00 3.06
2111 2212 3.057547 CTCGGTGCTCGTCTCCCTG 62.058 68.421 0.54 0.00 40.32 4.45
2119 2220 3.137459 CGTCTCCCTGAGCGAGCT 61.137 66.667 0.00 0.00 33.54 4.09
2177 2278 0.179181 ACTGCGACGTACGTATGTGG 60.179 55.000 24.57 22.89 44.60 4.17
2179 2280 2.226225 GCGACGTACGTATGTGGCC 61.226 63.158 32.56 20.07 39.89 5.36
2180 2281 1.430632 CGACGTACGTATGTGGCCT 59.569 57.895 24.57 0.00 37.22 5.19
2181 2282 0.864377 CGACGTACGTATGTGGCCTG 60.864 60.000 24.57 5.87 37.22 4.85
2182 2283 0.526954 GACGTACGTATGTGGCCTGG 60.527 60.000 24.57 0.00 0.00 4.45
2183 2284 1.252904 ACGTACGTATGTGGCCTGGT 61.253 55.000 21.41 0.00 0.00 4.00
2249 2357 0.878086 TCGAACGAATGTGCACTGCA 60.878 50.000 19.41 0.00 35.60 4.41
2274 2382 3.077519 GCTCATCGTGTACGGGCCT 62.078 63.158 0.84 0.00 40.29 5.19
2388 2496 1.144716 GATCCTGGTGATGCGCAGA 59.855 57.895 18.32 5.90 32.41 4.26
2486 2594 5.243060 CGTACTACCATCCCAACTGATGATA 59.757 44.000 2.70 0.00 43.94 2.15
2531 2639 2.349590 CAACGCACTGATCTGAATCCA 58.650 47.619 6.60 0.00 0.00 3.41
2638 2746 3.164977 TGGTCGAGGCCACCAACA 61.165 61.111 10.93 0.00 41.17 3.33
2673 2781 4.631131 TGAGGATATACATGTCCTTTGCG 58.369 43.478 0.00 0.00 46.75 4.85
2676 2784 4.102524 AGGATATACATGTCCTTTGCGGAA 59.897 41.667 0.00 0.00 44.81 4.30
2703 2811 1.298488 GAACTCGTCCGCGGAGATC 60.298 63.158 31.97 17.55 38.89 2.75
2808 2916 1.067213 AGCTTCGCTGTCCTTCTCTTC 60.067 52.381 0.00 0.00 37.57 2.87
2824 2939 6.553100 CCTTCTCTTCTTGTCCATCCTACTAT 59.447 42.308 0.00 0.00 0.00 2.12
2830 2945 8.206867 TCTTCTTGTCCATCCTACTATTGATTG 58.793 37.037 0.00 0.00 0.00 2.67
2833 2948 4.411869 TGTCCATCCTACTATTGATTGGCA 59.588 41.667 0.00 0.00 0.00 4.92
2865 2980 3.452755 TCGATTCATACGCCTGAATGT 57.547 42.857 15.46 0.00 44.00 2.71
2890 3005 5.726980 ACATAATTTGTGTGCAGGTGAAT 57.273 34.783 0.00 0.00 37.11 2.57
2938 3053 3.000041 TGTTGCATGTGATACGAGTTCC 59.000 45.455 0.00 0.00 0.00 3.62
3027 3142 0.830648 TATTCCTGTTCCGGCTCCAG 59.169 55.000 0.00 1.86 0.00 3.86
3051 3176 1.199615 TCCATTCTGGACGCCATACA 58.800 50.000 0.00 0.00 42.67 2.29
3056 3181 2.779755 TCTGGACGCCATACACAATT 57.220 45.000 0.00 0.00 30.82 2.32
3065 3190 4.142403 ACGCCATACACAATTTTGATCTGG 60.142 41.667 0.00 3.57 0.00 3.86
3071 3196 8.711457 CCATACACAATTTTGATCTGGTTTTTC 58.289 33.333 0.00 0.00 0.00 2.29
3218 3345 4.202367 CCTGTGTTTAACTTCACCTCCTCT 60.202 45.833 0.00 0.00 34.14 3.69
3227 3354 1.071987 CACCTCCTCTGCAGTGCAA 59.928 57.895 20.22 9.33 38.41 4.08
3329 3469 9.682465 ATTTTTACCTTAGGAGTCAATTAGGAC 57.318 33.333 4.77 0.00 38.08 3.85
3330 3470 6.461110 TTACCTTAGGAGTCAATTAGGACG 57.539 41.667 4.77 0.00 42.62 4.79
3331 3471 4.351127 ACCTTAGGAGTCAATTAGGACGT 58.649 43.478 4.77 0.00 42.62 4.34
3333 3473 5.954150 ACCTTAGGAGTCAATTAGGACGTTA 59.046 40.000 4.77 0.00 42.62 3.18
3334 3474 6.610425 ACCTTAGGAGTCAATTAGGACGTTAT 59.390 38.462 4.77 0.00 42.62 1.89
3335 3475 7.781693 ACCTTAGGAGTCAATTAGGACGTTATA 59.218 37.037 4.77 0.00 42.62 0.98
3336 3476 8.804204 CCTTAGGAGTCAATTAGGACGTTATAT 58.196 37.037 0.00 0.00 42.62 0.86
3366 3507 1.199097 CTTCACGTATGGTTGGTTGGC 59.801 52.381 0.00 0.00 0.00 4.52
3617 3760 6.239120 CCAATCCAACCCTTTGATCATCATAC 60.239 42.308 0.00 0.00 34.24 2.39
3618 3761 5.449297 TCCAACCCTTTGATCATCATACA 57.551 39.130 0.00 0.00 34.24 2.29
3619 3762 6.017211 TCCAACCCTTTGATCATCATACAT 57.983 37.500 0.00 0.00 34.24 2.29
3620 3763 7.147958 TCCAACCCTTTGATCATCATACATA 57.852 36.000 0.00 0.00 34.24 2.29
3622 3765 8.058235 TCCAACCCTTTGATCATCATACATAAA 58.942 33.333 0.00 0.00 34.24 1.40
3623 3766 8.137437 CCAACCCTTTGATCATCATACATAAAC 58.863 37.037 0.00 0.00 34.24 2.01
3624 3767 8.685427 CAACCCTTTGATCATCATACATAAACA 58.315 33.333 0.00 0.00 34.24 2.83
3625 3768 8.225603 ACCCTTTGATCATCATACATAAACAC 57.774 34.615 0.00 0.00 0.00 3.32
3626 3769 8.055181 ACCCTTTGATCATCATACATAAACACT 58.945 33.333 0.00 0.00 0.00 3.55
3627 3770 8.347771 CCCTTTGATCATCATACATAAACACTG 58.652 37.037 0.00 0.00 0.00 3.66
3629 3772 8.510243 TTTGATCATCATACATAAACACTGCT 57.490 30.769 0.00 0.00 0.00 4.24
3630 3773 8.510243 TTGATCATCATACATAAACACTGCTT 57.490 30.769 0.00 0.00 0.00 3.91
3631 3774 8.510243 TGATCATCATACATAAACACTGCTTT 57.490 30.769 0.00 0.00 0.00 3.51
3632 3775 8.400186 TGATCATCATACATAAACACTGCTTTG 58.600 33.333 0.00 0.00 0.00 2.77
3633 3776 7.686438 TCATCATACATAAACACTGCTTTGT 57.314 32.000 0.00 0.00 0.00 2.83
3634 3777 7.529158 TCATCATACATAAACACTGCTTTGTG 58.471 34.615 4.10 4.10 43.07 3.33
3635 3778 5.698832 TCATACATAAACACTGCTTTGTGC 58.301 37.500 5.29 0.00 41.30 4.57
3637 3780 2.035832 ACATAAACACTGCTTTGTGCCC 59.964 45.455 5.29 0.00 41.30 5.36
3638 3781 1.769026 TAAACACTGCTTTGTGCCCA 58.231 45.000 5.29 0.00 41.30 5.36
3640 3783 0.675633 AACACTGCTTTGTGCCCATC 59.324 50.000 5.29 0.00 41.30 3.51
3642 3785 0.242825 CACTGCTTTGTGCCCATCAG 59.757 55.000 0.00 0.00 42.00 2.90
3651 3794 2.310251 TGCCCATCAGCACCAGTAT 58.690 52.632 0.00 0.00 38.00 2.12
3728 3871 0.465705 TCCCTGCATCGTCTTCATCC 59.534 55.000 0.00 0.00 0.00 3.51
3771 3914 2.229690 ATTTGCAGCAACCGCCATCC 62.230 55.000 7.54 0.00 39.83 3.51
3789 3932 3.519973 CTCGCCACACTGCTCACCA 62.520 63.158 0.00 0.00 0.00 4.17
3806 3949 1.487976 ACCATCTCCACATCATCGCTT 59.512 47.619 0.00 0.00 0.00 4.68
3888 4032 2.656947 TCTGGTAATTAGCATGGGCC 57.343 50.000 17.19 0.00 42.56 5.80
3911 4055 1.251527 ACTCTGCTACCTGGTGTCCG 61.252 60.000 10.23 0.00 0.00 4.79
3949 4093 1.742880 GCAGGCTCATCGCTCACAA 60.743 57.895 0.00 0.00 39.13 3.33
3967 4111 5.917462 TCACAAACATACCATCTGATCGAT 58.083 37.500 0.00 0.00 0.00 3.59
3987 4131 2.463876 TGATGATCGATCGCTGTTGTC 58.536 47.619 20.03 9.58 33.17 3.18
4113 4258 4.124851 AGAGTGGACAATTCCGTACATC 57.875 45.455 0.00 0.00 46.37 3.06
4170 4315 2.679342 GGGCTACTCCACCATGCCA 61.679 63.158 0.00 0.00 44.85 4.92
4210 4355 2.567169 CTGGTGGACAGGAGTGATGTAA 59.433 50.000 0.00 0.00 43.70 2.41
4260 4408 2.359602 CCAGGTGGTCAGCAGCAG 60.360 66.667 9.05 0.00 0.00 4.24
4261 4409 3.054503 CAGGTGGTCAGCAGCAGC 61.055 66.667 9.05 0.00 46.77 5.25
4268 4416 1.012841 GGTCAGCAGCAGCAGATTAC 58.987 55.000 3.17 0.00 45.49 1.89
4322 4470 2.824546 GATCCCGCTGCAGATCCA 59.175 61.111 20.43 0.00 34.11 3.41
4341 4489 2.361104 GCGTTGGATGGGAAGCCA 60.361 61.111 0.00 0.00 0.00 4.75
4350 4498 4.329545 GGGAAGCCACTGACCGCA 62.330 66.667 0.00 0.00 0.00 5.69
4388 4536 8.010733 TCTTTCTTTGAGGTCACATGAATTTT 57.989 30.769 0.00 0.00 0.00 1.82
4389 4537 7.922278 TCTTTCTTTGAGGTCACATGAATTTTG 59.078 33.333 0.00 0.00 0.00 2.44
4390 4538 6.957920 TCTTTGAGGTCACATGAATTTTGA 57.042 33.333 0.00 0.00 0.00 2.69
4391 4539 7.345422 TCTTTGAGGTCACATGAATTTTGAA 57.655 32.000 0.00 0.00 0.00 2.69
4400 4548 6.642540 GTCACATGAATTTTGAAGTTTCTCCC 59.357 38.462 0.00 0.00 0.00 4.30
4408 4556 2.650322 TGAAGTTTCTCCCTGCGTTTT 58.350 42.857 0.00 0.00 0.00 2.43
4413 4561 5.121221 AGTTTCTCCCTGCGTTTTATTTG 57.879 39.130 0.00 0.00 0.00 2.32
4427 4575 5.124776 CGTTTTATTTGGGTCTCCATGCTTA 59.875 40.000 0.00 0.00 43.63 3.09
4434 4582 1.337071 GGTCTCCATGCTTATCGTCGA 59.663 52.381 0.00 0.00 0.00 4.20
4435 4583 2.029828 GGTCTCCATGCTTATCGTCGAT 60.030 50.000 13.16 13.16 0.00 3.59
4519 4667 2.683152 GCAGAATCAGGACATGAAGCCT 60.683 50.000 0.00 0.00 42.53 4.58
4569 4717 5.611374 AGATTTGGACGGGTATGATACTTG 58.389 41.667 2.24 0.00 0.00 3.16
4586 4734 3.854666 ACTTGGTCTTCATGATCGAGTG 58.145 45.455 0.00 0.00 46.09 3.51
4604 4752 4.347813 GAGTGCTCTCGAGACTTATCAAC 58.652 47.826 12.08 2.52 0.00 3.18
4609 4757 4.732355 GCTCTCGAGACTTATCAACTGACC 60.732 50.000 12.08 0.00 0.00 4.02
4615 4763 5.407407 AGACTTATCAACTGACCGATTGT 57.593 39.130 0.00 0.00 0.00 2.71
4626 4774 8.556194 TCAACTGACCGATTGTATTATTTATGC 58.444 33.333 0.00 0.00 0.00 3.14
4627 4775 8.559536 CAACTGACCGATTGTATTATTTATGCT 58.440 33.333 0.00 0.00 0.00 3.79
4629 4777 7.715249 ACTGACCGATTGTATTATTTATGCTGT 59.285 33.333 0.00 0.00 0.00 4.40
4632 4780 8.445275 ACCGATTGTATTATTTATGCTGTTGA 57.555 30.769 0.00 0.00 0.00 3.18
4633 4781 8.898761 ACCGATTGTATTATTTATGCTGTTGAA 58.101 29.630 0.00 0.00 0.00 2.69
4634 4782 9.729023 CCGATTGTATTATTTATGCTGTTGAAA 57.271 29.630 0.00 0.00 0.00 2.69
4638 4786 8.888332 TGTATTATTTATGCTGTTGAAACGTG 57.112 30.769 0.00 0.00 0.00 4.49
4667 4817 4.046286 TGGATGCAGGTGGAAATACTTT 57.954 40.909 0.00 0.00 0.00 2.66
4796 4946 2.680352 GCACTCGTCCTCCCCAGA 60.680 66.667 0.00 0.00 0.00 3.86
4832 4982 0.526954 CAATCCTTGCGATGCCTTGC 60.527 55.000 0.00 0.00 0.00 4.01
4871 5021 0.248661 CACTCATCAGAGGTACGCCG 60.249 60.000 0.00 0.00 46.44 6.46
4873 5023 0.029567 CTCATCAGAGGTACGCCGTC 59.970 60.000 0.00 0.00 40.50 4.79
4878 5028 2.125961 AGAGGTACGCCGTCCATCC 61.126 63.158 0.00 0.00 40.50 3.51
4909 5059 1.094785 TCGATGCAGAGATCGTGTGA 58.905 50.000 7.27 0.00 44.57 3.58
4918 5072 4.330894 GCAGAGATCGTGTGATTGATTTCA 59.669 41.667 0.79 0.00 34.09 2.69
4919 5073 5.163824 GCAGAGATCGTGTGATTGATTTCAA 60.164 40.000 0.00 0.00 40.51 2.69
4926 5080 4.331443 CGTGTGATTGATTTCAACGGGATA 59.669 41.667 0.00 0.00 38.86 2.59
4938 5092 7.416154 TTTCAACGGGATAAATGATATCGAC 57.584 36.000 0.00 0.00 0.00 4.20
5118 5272 2.043852 AGGAGATCGTCAGGCGGT 60.044 61.111 0.00 0.00 41.72 5.68
5378 5532 3.624861 GGATCTACTACACGTTCCTCGAA 59.375 47.826 0.00 0.00 42.86 3.71
5568 5722 3.555324 TGGCCAGCGAGGTGTTCA 61.555 61.111 0.00 0.00 40.61 3.18
5609 5775 2.125512 ATCGACAGGAACAGCGGC 60.126 61.111 0.00 0.00 0.00 6.53
5610 5776 3.989698 ATCGACAGGAACAGCGGCG 62.990 63.158 0.51 0.51 0.00 6.46
5611 5777 4.717629 CGACAGGAACAGCGGCGA 62.718 66.667 12.98 0.00 0.00 5.54
5612 5778 3.112709 GACAGGAACAGCGGCGAC 61.113 66.667 12.98 1.23 0.00 5.19
5750 5916 2.743928 GTGCAGTTCCTGAGCCCG 60.744 66.667 0.00 0.00 32.44 6.13
6150 6321 2.286523 AACAGGTAGCAGGCTCGCT 61.287 57.895 14.29 14.29 46.26 4.93
6151 6322 2.105930 CAGGTAGCAGGCTCGCTC 59.894 66.667 13.45 7.09 42.62 5.03
6159 6333 2.755876 AGGCTCGCTCGTCCATGA 60.756 61.111 0.00 0.00 0.00 3.07
6171 6345 1.131126 CGTCCATGATTGGCAAGTGAC 59.869 52.381 5.96 6.68 43.29 3.67
6172 6346 2.161855 GTCCATGATTGGCAAGTGACA 58.838 47.619 5.96 4.01 43.29 3.58
6179 6353 4.338012 TGATTGGCAAGTGACATGAGAAT 58.662 39.130 5.96 0.00 30.06 2.40
6180 6354 5.499313 TGATTGGCAAGTGACATGAGAATA 58.501 37.500 5.96 0.00 30.06 1.75
6181 6355 5.945191 TGATTGGCAAGTGACATGAGAATAA 59.055 36.000 5.96 0.00 30.06 1.40
6182 6356 5.885230 TTGGCAAGTGACATGAGAATAAG 57.115 39.130 0.00 0.00 30.06 1.73
6183 6357 5.164620 TGGCAAGTGACATGAGAATAAGA 57.835 39.130 0.00 0.00 0.00 2.10
6184 6358 5.748402 TGGCAAGTGACATGAGAATAAGAT 58.252 37.500 0.00 0.00 0.00 2.40
6185 6359 6.888105 TGGCAAGTGACATGAGAATAAGATA 58.112 36.000 0.00 0.00 0.00 1.98
6186 6360 6.988580 TGGCAAGTGACATGAGAATAAGATAG 59.011 38.462 0.00 0.00 0.00 2.08
6187 6361 7.147672 TGGCAAGTGACATGAGAATAAGATAGA 60.148 37.037 0.00 0.00 0.00 1.98
6188 6362 7.712639 GGCAAGTGACATGAGAATAAGATAGAA 59.287 37.037 0.00 0.00 0.00 2.10
6189 6363 9.270640 GCAAGTGACATGAGAATAAGATAGAAT 57.729 33.333 0.00 0.00 0.00 2.40
6304 6507 8.427012 CCGTTTAATTTGACACAAAATCATCAG 58.573 33.333 0.00 0.00 0.00 2.90
6348 6551 8.132995 GCATTATTGTCACAAGATCATTCATGA 58.867 33.333 0.00 0.00 41.70 3.07
6351 6554 3.934579 TGTCACAAGATCATTCATGACCG 59.065 43.478 0.00 0.00 40.03 4.79
6353 6556 5.109210 GTCACAAGATCATTCATGACCGTA 58.891 41.667 0.00 0.00 40.03 4.02
6481 6736 7.251994 AGAGCGTTTAGATCACTACACTTTAG 58.748 38.462 0.00 0.00 37.82 1.85
6607 6874 6.488683 TGTTGTTCCCGAGTGAAATCTTAAAT 59.511 34.615 0.00 0.00 0.00 1.40
6613 6880 5.286082 CCCGAGTGAAATCTTAAATTTTGCG 59.714 40.000 0.00 0.00 0.00 4.85
6620 6887 8.647226 GTGAAATCTTAAATTTTGCGCACTTAT 58.353 29.630 11.12 0.00 0.00 1.73
6640 6907 9.252962 CACTTATAATCATGAAATTGAAAGGCC 57.747 33.333 0.00 0.00 0.00 5.19
6645 6912 4.746729 TCATGAAATTGAAAGGCCATTCG 58.253 39.130 15.54 0.00 31.80 3.34
6722 6991 5.238214 GCATCCTAGCTTCCTAAACATTGAG 59.762 44.000 0.00 0.00 0.00 3.02
6793 7062 4.223923 TCTTTTGGGGCTCAAACAAAGAAA 59.776 37.500 13.06 0.00 44.20 2.52
6807 7076 5.568620 ACAAAGAAAGTGATCCAGTAGGT 57.431 39.130 0.00 0.00 35.89 3.08
6884 7153 1.594310 GACAGGTGTGAGAGGAGGC 59.406 63.158 0.00 0.00 0.00 4.70
6888 7157 2.607750 GTGTGAGAGGAGGCCCCA 60.608 66.667 12.24 0.00 37.41 4.96
6913 7182 2.515912 GGTCATTGCGAAATTTCCGAC 58.484 47.619 12.54 10.54 0.00 4.79
6916 7185 4.165779 GTCATTGCGAAATTTCCGACAAT 58.834 39.130 12.54 15.21 35.69 2.71
6961 7230 4.415332 CGTGGCGGTAGAGTGCGT 62.415 66.667 0.00 0.00 0.00 5.24
7011 7280 1.756950 CCAGGCTGCCATGATGCTT 60.757 57.895 22.65 0.00 0.00 3.91
7030 7299 4.953579 TGCTTCTTTACACCTTCAACCTTT 59.046 37.500 0.00 0.00 0.00 3.11
7031 7300 5.163561 TGCTTCTTTACACCTTCAACCTTTG 60.164 40.000 0.00 0.00 0.00 2.77
7037 7306 1.133482 CACCTTCAACCTTTGTCCCCT 60.133 52.381 0.00 0.00 0.00 4.79
7087 7356 3.356290 GTCTTTGACAATGCCATACCCT 58.644 45.455 0.00 0.00 32.09 4.34
7098 7367 2.225041 TGCCATACCCTCGAGTATAGCT 60.225 50.000 12.31 0.00 37.95 3.32
7133 7402 2.567049 CACGACTCGGAGTCCACC 59.433 66.667 27.55 8.31 42.12 4.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.656069 GCGGAAGAGGGCACAGGTA 61.656 63.158 0.00 0.00 0.00 3.08
1 2 4.021925 GCGGAAGAGGGCACAGGT 62.022 66.667 0.00 0.00 0.00 4.00
2 3 4.785453 GGCGGAAGAGGGCACAGG 62.785 72.222 0.00 0.00 0.00 4.00
3 4 3.965539 CTGGCGGAAGAGGGCACAG 62.966 68.421 0.00 0.00 35.92 3.66
4 5 4.020617 CTGGCGGAAGAGGGCACA 62.021 66.667 0.00 0.00 35.92 4.57
5 6 3.959991 GACTGGCGGAAGAGGGCAC 62.960 68.421 0.00 0.00 35.92 5.01
6 7 2.798445 TAGACTGGCGGAAGAGGGCA 62.798 60.000 0.00 0.00 38.36 5.36
7 8 1.403687 ATAGACTGGCGGAAGAGGGC 61.404 60.000 0.00 0.00 0.00 5.19
8 9 0.390860 CATAGACTGGCGGAAGAGGG 59.609 60.000 0.00 0.00 0.00 4.30
9 10 1.115467 ACATAGACTGGCGGAAGAGG 58.885 55.000 0.00 0.00 0.00 3.69
10 11 4.386867 TTTACATAGACTGGCGGAAGAG 57.613 45.455 0.00 0.00 0.00 2.85
11 12 4.501071 GTTTTACATAGACTGGCGGAAGA 58.499 43.478 0.00 0.00 0.00 2.87
12 13 3.306166 CGTTTTACATAGACTGGCGGAAG 59.694 47.826 0.00 0.00 0.00 3.46
13 14 3.255725 CGTTTTACATAGACTGGCGGAA 58.744 45.455 0.00 0.00 0.00 4.30
14 15 2.417651 CCGTTTTACATAGACTGGCGGA 60.418 50.000 0.00 0.00 39.05 5.54
15 16 1.931172 CCGTTTTACATAGACTGGCGG 59.069 52.381 0.00 0.00 0.00 6.13
16 17 2.883574 TCCGTTTTACATAGACTGGCG 58.116 47.619 0.00 0.00 0.00 5.69
17 18 4.251268 ACTTCCGTTTTACATAGACTGGC 58.749 43.478 0.00 0.00 0.00 4.85
18 19 7.601508 AGTTAACTTCCGTTTTACATAGACTGG 59.398 37.037 1.12 0.00 34.59 4.00
19 20 8.530269 AGTTAACTTCCGTTTTACATAGACTG 57.470 34.615 1.12 0.00 34.59 3.51
25 26 8.872845 CGGTATTAGTTAACTTCCGTTTTACAT 58.127 33.333 14.49 0.00 34.59 2.29
26 27 7.148656 GCGGTATTAGTTAACTTCCGTTTTACA 60.149 37.037 26.04 4.05 38.89 2.41
27 28 7.063426 AGCGGTATTAGTTAACTTCCGTTTTAC 59.937 37.037 26.04 16.74 38.89 2.01
28 29 7.096551 AGCGGTATTAGTTAACTTCCGTTTTA 58.903 34.615 26.04 5.19 38.89 1.52
29 30 5.934043 AGCGGTATTAGTTAACTTCCGTTTT 59.066 36.000 26.04 16.90 38.89 2.43
30 31 5.482006 AGCGGTATTAGTTAACTTCCGTTT 58.518 37.500 26.04 18.37 38.89 3.60
31 32 5.077134 AGCGGTATTAGTTAACTTCCGTT 57.923 39.130 26.04 21.91 38.89 4.44
32 33 4.400567 AGAGCGGTATTAGTTAACTTCCGT 59.599 41.667 26.04 18.73 38.89 4.69
33 34 4.929781 AGAGCGGTATTAGTTAACTTCCG 58.070 43.478 23.73 23.73 39.52 4.30
34 35 6.571605 AGAAGAGCGGTATTAGTTAACTTCC 58.428 40.000 14.49 10.38 33.95 3.46
35 36 8.404765 AGTAGAAGAGCGGTATTAGTTAACTTC 58.595 37.037 14.49 2.46 33.74 3.01
36 37 8.291191 AGTAGAAGAGCGGTATTAGTTAACTT 57.709 34.615 14.49 0.00 0.00 2.66
37 38 7.878547 AGTAGAAGAGCGGTATTAGTTAACT 57.121 36.000 13.68 13.68 0.00 2.24
38 39 8.923609 AAAGTAGAAGAGCGGTATTAGTTAAC 57.076 34.615 0.00 0.00 0.00 2.01
39 40 9.362539 CAAAAGTAGAAGAGCGGTATTAGTTAA 57.637 33.333 0.00 0.00 0.00 2.01
40 41 7.490402 GCAAAAGTAGAAGAGCGGTATTAGTTA 59.510 37.037 0.00 0.00 0.00 2.24
41 42 6.313164 GCAAAAGTAGAAGAGCGGTATTAGTT 59.687 38.462 0.00 0.00 0.00 2.24
42 43 5.811100 GCAAAAGTAGAAGAGCGGTATTAGT 59.189 40.000 0.00 0.00 0.00 2.24
43 44 6.043411 AGCAAAAGTAGAAGAGCGGTATTAG 58.957 40.000 0.00 0.00 0.00 1.73
44 45 5.974108 AGCAAAAGTAGAAGAGCGGTATTA 58.026 37.500 0.00 0.00 0.00 0.98
45 46 4.833390 AGCAAAAGTAGAAGAGCGGTATT 58.167 39.130 0.00 0.00 0.00 1.89
46 47 4.473477 AGCAAAAGTAGAAGAGCGGTAT 57.527 40.909 0.00 0.00 0.00 2.73
47 48 3.955650 AGCAAAAGTAGAAGAGCGGTA 57.044 42.857 0.00 0.00 0.00 4.02
48 49 2.841442 AGCAAAAGTAGAAGAGCGGT 57.159 45.000 0.00 0.00 0.00 5.68
49 50 3.124297 CAGAAGCAAAAGTAGAAGAGCGG 59.876 47.826 0.00 0.00 0.00 5.52
50 51 3.990469 TCAGAAGCAAAAGTAGAAGAGCG 59.010 43.478 0.00 0.00 0.00 5.03
51 52 4.994217 ACTCAGAAGCAAAAGTAGAAGAGC 59.006 41.667 0.00 0.00 0.00 4.09
52 53 6.481644 ACAACTCAGAAGCAAAAGTAGAAGAG 59.518 38.462 0.00 0.00 0.00 2.85
53 54 6.349300 ACAACTCAGAAGCAAAAGTAGAAGA 58.651 36.000 0.00 0.00 0.00 2.87
54 55 6.610741 ACAACTCAGAAGCAAAAGTAGAAG 57.389 37.500 0.00 0.00 0.00 2.85
55 56 6.374333 ACAACAACTCAGAAGCAAAAGTAGAA 59.626 34.615 0.00 0.00 0.00 2.10
56 57 5.880332 ACAACAACTCAGAAGCAAAAGTAGA 59.120 36.000 0.00 0.00 0.00 2.59
57 58 6.124088 ACAACAACTCAGAAGCAAAAGTAG 57.876 37.500 0.00 0.00 0.00 2.57
58 59 7.618502 TTACAACAACTCAGAAGCAAAAGTA 57.381 32.000 0.00 0.00 0.00 2.24
59 60 6.509418 TTACAACAACTCAGAAGCAAAAGT 57.491 33.333 0.00 0.00 0.00 2.66
60 61 6.418819 CCATTACAACAACTCAGAAGCAAAAG 59.581 38.462 0.00 0.00 0.00 2.27
61 62 6.272318 CCATTACAACAACTCAGAAGCAAAA 58.728 36.000 0.00 0.00 0.00 2.44
62 63 5.735922 GCCATTACAACAACTCAGAAGCAAA 60.736 40.000 0.00 0.00 0.00 3.68
63 64 4.261572 GCCATTACAACAACTCAGAAGCAA 60.262 41.667 0.00 0.00 0.00 3.91
64 65 3.253188 GCCATTACAACAACTCAGAAGCA 59.747 43.478 0.00 0.00 0.00 3.91
65 66 3.503748 AGCCATTACAACAACTCAGAAGC 59.496 43.478 0.00 0.00 0.00 3.86
66 67 4.999950 AGAGCCATTACAACAACTCAGAAG 59.000 41.667 0.00 0.00 0.00 2.85
67 68 4.973168 AGAGCCATTACAACAACTCAGAA 58.027 39.130 0.00 0.00 0.00 3.02
68 69 4.623932 AGAGCCATTACAACAACTCAGA 57.376 40.909 0.00 0.00 0.00 3.27
69 70 5.352569 CCTAAGAGCCATTACAACAACTCAG 59.647 44.000 0.00 0.00 0.00 3.35
70 71 5.245531 CCTAAGAGCCATTACAACAACTCA 58.754 41.667 0.00 0.00 0.00 3.41
71 72 4.636206 CCCTAAGAGCCATTACAACAACTC 59.364 45.833 0.00 0.00 0.00 3.01
72 73 4.042934 ACCCTAAGAGCCATTACAACAACT 59.957 41.667 0.00 0.00 0.00 3.16
73 74 4.332828 ACCCTAAGAGCCATTACAACAAC 58.667 43.478 0.00 0.00 0.00 3.32
74 75 4.650972 ACCCTAAGAGCCATTACAACAA 57.349 40.909 0.00 0.00 0.00 2.83
75 76 4.781087 ACTACCCTAAGAGCCATTACAACA 59.219 41.667 0.00 0.00 0.00 3.33
76 77 5.354842 ACTACCCTAAGAGCCATTACAAC 57.645 43.478 0.00 0.00 0.00 3.32
77 78 6.013206 TCAAACTACCCTAAGAGCCATTACAA 60.013 38.462 0.00 0.00 0.00 2.41
78 79 5.486063 TCAAACTACCCTAAGAGCCATTACA 59.514 40.000 0.00 0.00 0.00 2.41
79 80 5.985911 TCAAACTACCCTAAGAGCCATTAC 58.014 41.667 0.00 0.00 0.00 1.89
80 81 6.630203 TTCAAACTACCCTAAGAGCCATTA 57.370 37.500 0.00 0.00 0.00 1.90
81 82 5.514500 TTCAAACTACCCTAAGAGCCATT 57.486 39.130 0.00 0.00 0.00 3.16
82 83 5.717119 ATTCAAACTACCCTAAGAGCCAT 57.283 39.130 0.00 0.00 0.00 4.40
83 84 5.497474 GAATTCAAACTACCCTAAGAGCCA 58.503 41.667 0.00 0.00 0.00 4.75
84 85 4.571176 CGAATTCAAACTACCCTAAGAGCC 59.429 45.833 6.22 0.00 0.00 4.70
85 86 4.571176 CCGAATTCAAACTACCCTAAGAGC 59.429 45.833 6.22 0.00 0.00 4.09
86 87 5.731591 ACCGAATTCAAACTACCCTAAGAG 58.268 41.667 6.22 0.00 0.00 2.85
87 88 5.482878 AGACCGAATTCAAACTACCCTAAGA 59.517 40.000 6.22 0.00 0.00 2.10
88 89 5.581085 CAGACCGAATTCAAACTACCCTAAG 59.419 44.000 6.22 0.00 0.00 2.18
89 90 5.484715 CAGACCGAATTCAAACTACCCTAA 58.515 41.667 6.22 0.00 0.00 2.69
90 91 4.622220 GCAGACCGAATTCAAACTACCCTA 60.622 45.833 6.22 0.00 0.00 3.53
91 92 3.868754 GCAGACCGAATTCAAACTACCCT 60.869 47.826 6.22 0.00 0.00 4.34
92 93 2.418976 GCAGACCGAATTCAAACTACCC 59.581 50.000 6.22 0.00 0.00 3.69
93 94 2.418976 GGCAGACCGAATTCAAACTACC 59.581 50.000 6.22 1.84 0.00 3.18
94 95 3.741805 GGCAGACCGAATTCAAACTAC 57.258 47.619 6.22 0.00 0.00 2.73
107 108 1.940613 CAAATAGCTAACCGGCAGACC 59.059 52.381 0.00 0.00 34.17 3.85
108 109 2.901249 TCAAATAGCTAACCGGCAGAC 58.099 47.619 0.00 0.00 34.17 3.51
109 110 3.494398 GGATCAAATAGCTAACCGGCAGA 60.494 47.826 0.00 0.00 34.17 4.26
110 111 2.808543 GGATCAAATAGCTAACCGGCAG 59.191 50.000 0.00 0.00 34.17 4.85
111 112 2.438021 AGGATCAAATAGCTAACCGGCA 59.562 45.455 0.00 0.00 34.17 5.69
112 113 2.808543 CAGGATCAAATAGCTAACCGGC 59.191 50.000 0.00 0.00 0.00 6.13
113 114 3.809832 CACAGGATCAAATAGCTAACCGG 59.190 47.826 0.00 0.00 0.00 5.28
114 115 3.809832 CCACAGGATCAAATAGCTAACCG 59.190 47.826 0.00 0.00 0.00 4.44
115 116 5.036117 TCCACAGGATCAAATAGCTAACC 57.964 43.478 0.00 0.00 0.00 2.85
116 117 5.675538 ACTCCACAGGATCAAATAGCTAAC 58.324 41.667 0.00 0.00 0.00 2.34
117 118 5.163301 GGACTCCACAGGATCAAATAGCTAA 60.163 44.000 0.00 0.00 0.00 3.09
118 119 4.345257 GGACTCCACAGGATCAAATAGCTA 59.655 45.833 0.00 0.00 0.00 3.32
119 120 3.135530 GGACTCCACAGGATCAAATAGCT 59.864 47.826 0.00 0.00 0.00 3.32
120 121 3.471680 GGACTCCACAGGATCAAATAGC 58.528 50.000 0.00 0.00 0.00 2.97
121 122 3.493350 CCGGACTCCACAGGATCAAATAG 60.493 52.174 0.00 0.00 0.00 1.73
122 123 2.434336 CCGGACTCCACAGGATCAAATA 59.566 50.000 0.00 0.00 0.00 1.40
123 124 1.210478 CCGGACTCCACAGGATCAAAT 59.790 52.381 0.00 0.00 0.00 2.32
124 125 0.613260 CCGGACTCCACAGGATCAAA 59.387 55.000 0.00 0.00 0.00 2.69
125 126 0.544357 ACCGGACTCCACAGGATCAA 60.544 55.000 9.46 0.00 0.00 2.57
126 127 0.544357 AACCGGACTCCACAGGATCA 60.544 55.000 9.46 0.00 0.00 2.92
127 128 0.108138 CAACCGGACTCCACAGGATC 60.108 60.000 9.46 0.00 0.00 3.36
128 129 1.553690 CCAACCGGACTCCACAGGAT 61.554 60.000 9.46 0.00 0.00 3.24
129 130 2.214216 CCAACCGGACTCCACAGGA 61.214 63.158 9.46 0.00 0.00 3.86
130 131 2.052047 AACCAACCGGACTCCACAGG 62.052 60.000 9.46 0.00 35.59 4.00
131 132 0.179029 AAACCAACCGGACTCCACAG 60.179 55.000 9.46 0.00 35.59 3.66
132 133 0.179040 GAAACCAACCGGACTCCACA 60.179 55.000 9.46 0.00 35.59 4.17
133 134 0.108019 AGAAACCAACCGGACTCCAC 59.892 55.000 9.46 0.00 35.59 4.02
134 135 0.841289 AAGAAACCAACCGGACTCCA 59.159 50.000 9.46 0.00 35.59 3.86
135 136 1.878088 GAAAGAAACCAACCGGACTCC 59.122 52.381 9.46 0.00 35.59 3.85
136 137 1.529865 CGAAAGAAACCAACCGGACTC 59.470 52.381 9.46 0.00 35.59 3.36
137 138 1.134310 ACGAAAGAAACCAACCGGACT 60.134 47.619 9.46 0.00 35.59 3.85
138 139 1.302366 ACGAAAGAAACCAACCGGAC 58.698 50.000 9.46 0.00 35.59 4.79
139 140 2.041251 AACGAAAGAAACCAACCGGA 57.959 45.000 9.46 0.00 35.59 5.14
140 141 2.855660 AAACGAAAGAAACCAACCGG 57.144 45.000 0.00 0.00 38.77 5.28
141 142 4.541085 AGTAAACGAAAGAAACCAACCG 57.459 40.909 0.00 0.00 0.00 4.44
142 143 5.453266 CGAAAGTAAACGAAAGAAACCAACC 59.547 40.000 0.00 0.00 0.00 3.77
143 144 6.250089 TCGAAAGTAAACGAAAGAAACCAAC 58.750 36.000 0.00 0.00 35.62 3.77
144 145 6.419980 TCGAAAGTAAACGAAAGAAACCAA 57.580 33.333 0.00 0.00 35.62 3.67
145 146 6.092533 AGTTCGAAAGTAAACGAAAGAAACCA 59.907 34.615 0.00 0.00 46.98 3.67
146 147 6.481134 AGTTCGAAAGTAAACGAAAGAAACC 58.519 36.000 0.00 0.00 46.98 3.27
147 148 7.397194 AGAGTTCGAAAGTAAACGAAAGAAAC 58.603 34.615 0.00 0.00 46.98 2.78
148 149 7.529880 AGAGTTCGAAAGTAAACGAAAGAAA 57.470 32.000 0.00 0.00 46.98 2.52
149 150 7.529880 AAGAGTTCGAAAGTAAACGAAAGAA 57.470 32.000 0.00 0.00 46.98 2.52
150 151 7.529880 AAAGAGTTCGAAAGTAAACGAAAGA 57.470 32.000 0.00 0.00 46.98 2.52
153 154 9.897744 TCTATAAAGAGTTCGAAAGTAAACGAA 57.102 29.630 0.00 0.00 44.26 3.85
154 155 9.897744 TTCTATAAAGAGTTCGAAAGTAAACGA 57.102 29.630 0.00 0.00 33.21 3.85
155 156 9.934641 GTTCTATAAAGAGTTCGAAAGTAAACG 57.065 33.333 0.00 0.00 31.96 3.60
159 160 9.622004 CACAGTTCTATAAAGAGTTCGAAAGTA 57.378 33.333 0.00 0.00 31.96 2.24
160 161 8.142551 ACACAGTTCTATAAAGAGTTCGAAAGT 58.857 33.333 0.00 0.00 31.96 2.66
161 162 8.428536 CACACAGTTCTATAAAGAGTTCGAAAG 58.571 37.037 0.00 0.00 31.96 2.62
162 163 7.384115 CCACACAGTTCTATAAAGAGTTCGAAA 59.616 37.037 0.00 0.00 31.96 3.46
163 164 6.866770 CCACACAGTTCTATAAAGAGTTCGAA 59.133 38.462 0.00 0.00 31.96 3.71
164 165 6.015688 ACCACACAGTTCTATAAAGAGTTCGA 60.016 38.462 0.00 0.00 31.96 3.71
165 166 6.157211 ACCACACAGTTCTATAAAGAGTTCG 58.843 40.000 0.00 0.00 31.96 3.95
166 167 7.964604 AACCACACAGTTCTATAAAGAGTTC 57.035 36.000 0.00 0.00 31.96 3.01
167 168 8.747538 AAAACCACACAGTTCTATAAAGAGTT 57.252 30.769 0.00 0.00 31.96 3.01
168 169 7.990886 TGAAAACCACACAGTTCTATAAAGAGT 59.009 33.333 0.00 0.00 31.96 3.24
169 170 8.378172 TGAAAACCACACAGTTCTATAAAGAG 57.622 34.615 0.00 0.00 31.96 2.85
170 171 7.990886 ACTGAAAACCACACAGTTCTATAAAGA 59.009 33.333 0.00 0.00 41.21 2.52
171 172 8.154649 ACTGAAAACCACACAGTTCTATAAAG 57.845 34.615 0.00 0.00 41.21 1.85
172 173 9.616156 TTACTGAAAACCACACAGTTCTATAAA 57.384 29.630 0.00 0.00 43.27 1.40
173 174 9.787435 ATTACTGAAAACCACACAGTTCTATAA 57.213 29.630 0.00 0.00 43.27 0.98
174 175 9.214957 CATTACTGAAAACCACACAGTTCTATA 57.785 33.333 0.00 0.00 43.27 1.31
175 176 7.936847 TCATTACTGAAAACCACACAGTTCTAT 59.063 33.333 0.00 0.00 43.27 1.98
176 177 7.276658 TCATTACTGAAAACCACACAGTTCTA 58.723 34.615 0.00 0.00 43.27 2.10
177 178 6.119536 TCATTACTGAAAACCACACAGTTCT 58.880 36.000 0.00 0.00 43.27 3.01
178 179 6.371809 TCATTACTGAAAACCACACAGTTC 57.628 37.500 0.00 0.00 43.27 3.01
179 180 6.767524 TTCATTACTGAAAACCACACAGTT 57.232 33.333 0.00 0.00 43.27 3.16
180 181 6.767524 TTTCATTACTGAAAACCACACAGT 57.232 33.333 5.83 0.00 45.91 3.55
190 191 6.571537 GCCCCTTTCGATTTTCATTACTGAAA 60.572 38.462 4.26 4.26 46.92 2.69
191 192 5.105917 GCCCCTTTCGATTTTCATTACTGAA 60.106 40.000 0.00 0.00 39.62 3.02
192 193 4.398044 GCCCCTTTCGATTTTCATTACTGA 59.602 41.667 0.00 0.00 0.00 3.41
193 194 4.157656 TGCCCCTTTCGATTTTCATTACTG 59.842 41.667 0.00 0.00 0.00 2.74
194 195 4.340617 TGCCCCTTTCGATTTTCATTACT 58.659 39.130 0.00 0.00 0.00 2.24
195 196 4.712122 TGCCCCTTTCGATTTTCATTAC 57.288 40.909 0.00 0.00 0.00 1.89
196 197 4.381505 GCTTGCCCCTTTCGATTTTCATTA 60.382 41.667 0.00 0.00 0.00 1.90
197 198 3.617288 GCTTGCCCCTTTCGATTTTCATT 60.617 43.478 0.00 0.00 0.00 2.57
198 199 2.094026 GCTTGCCCCTTTCGATTTTCAT 60.094 45.455 0.00 0.00 0.00 2.57
199 200 1.272212 GCTTGCCCCTTTCGATTTTCA 59.728 47.619 0.00 0.00 0.00 2.69
200 201 1.404181 GGCTTGCCCCTTTCGATTTTC 60.404 52.381 0.00 0.00 0.00 2.29
201 202 0.608130 GGCTTGCCCCTTTCGATTTT 59.392 50.000 0.00 0.00 0.00 1.82
202 203 2.276869 GGCTTGCCCCTTTCGATTT 58.723 52.632 0.00 0.00 0.00 2.17
203 204 4.018409 GGCTTGCCCCTTTCGATT 57.982 55.556 0.00 0.00 0.00 3.34
212 213 0.533951 CATCAAAGAAGGGCTTGCCC 59.466 55.000 22.29 22.29 36.80 5.36
213 214 1.549203 TCATCAAAGAAGGGCTTGCC 58.451 50.000 2.49 2.49 36.80 4.52
214 215 3.665745 TTTCATCAAAGAAGGGCTTGC 57.334 42.857 0.00 0.00 36.80 4.01
339 347 0.103208 GCCAGTGACTGAGGATACGG 59.897 60.000 15.33 0.00 46.39 4.02
341 349 2.103373 TGAGCCAGTGACTGAGGATAC 58.897 52.381 15.33 0.27 32.44 2.24
372 380 0.944311 TCGAGCTTTCAGTGTTCGGC 60.944 55.000 0.00 0.00 32.52 5.54
403 411 4.437820 GTCGACAAAACTTCAGCAATCAAC 59.562 41.667 11.55 0.00 0.00 3.18
404 412 4.095632 TGTCGACAAAACTTCAGCAATCAA 59.904 37.500 17.62 0.00 0.00 2.57
415 423 4.104776 CAACAATTGCTGTCGACAAAACT 58.895 39.130 20.49 4.23 37.23 2.66
424 432 2.727798 GTGCATGTCAACAATTGCTGTC 59.272 45.455 5.05 2.07 37.23 3.51
469 477 7.094377 ACAGTTGAGTTTAGCTGAAAGAAACAA 60.094 33.333 10.76 3.39 34.24 2.83
507 515 3.942115 TCGTGAAATCTCCAACACACAAA 59.058 39.130 0.00 0.00 33.56 2.83
508 516 3.536570 TCGTGAAATCTCCAACACACAA 58.463 40.909 0.00 0.00 33.56 3.33
536 544 3.034635 GCTTGGATTCTCTCTCCCTGTA 58.965 50.000 0.00 0.00 31.32 2.74
545 557 2.880963 GCTACTCGCTTGGATTCTCT 57.119 50.000 0.00 0.00 35.14 3.10
595 607 3.686916 AGTTTTTCTCCCTTCCTCTCG 57.313 47.619 0.00 0.00 0.00 4.04
617 643 4.870991 CCCTTGTTTCTACTAAGCACTAGC 59.129 45.833 0.00 0.00 42.56 3.42
618 644 6.100668 GTCCCTTGTTTCTACTAAGCACTAG 58.899 44.000 0.00 0.00 0.00 2.57
619 645 5.541101 TGTCCCTTGTTTCTACTAAGCACTA 59.459 40.000 0.00 0.00 0.00 2.74
620 646 4.347000 TGTCCCTTGTTTCTACTAAGCACT 59.653 41.667 0.00 0.00 0.00 4.40
621 647 4.638304 TGTCCCTTGTTTCTACTAAGCAC 58.362 43.478 0.00 0.00 0.00 4.40
622 648 4.967084 TGTCCCTTGTTTCTACTAAGCA 57.033 40.909 0.00 0.00 0.00 3.91
625 651 6.544564 CCAAACTTGTCCCTTGTTTCTACTAA 59.455 38.462 0.00 0.00 32.42 2.24
643 669 1.777272 AGGACCAGAAGAGCCAAACTT 59.223 47.619 0.00 0.00 0.00 2.66
841 893 3.157217 AATGGCGCGCTAGCTAGCT 62.157 57.895 36.02 23.12 46.85 3.32
943 1013 1.002274 CAGGGTAGGGGAGAGCACT 59.998 63.158 0.00 0.00 0.00 4.40
944 1014 2.736826 GCAGGGTAGGGGAGAGCAC 61.737 68.421 0.00 0.00 0.00 4.40
945 1015 2.365635 GCAGGGTAGGGGAGAGCA 60.366 66.667 0.00 0.00 0.00 4.26
946 1016 1.763546 GATGCAGGGTAGGGGAGAGC 61.764 65.000 0.00 0.00 0.00 4.09
948 1018 0.399091 CAGATGCAGGGTAGGGGAGA 60.399 60.000 0.00 0.00 0.00 3.71
949 1019 2.049627 GCAGATGCAGGGTAGGGGAG 62.050 65.000 0.00 0.00 41.59 4.30
950 1020 2.072487 GCAGATGCAGGGTAGGGGA 61.072 63.158 0.00 0.00 41.59 4.81
973 1046 2.145397 TCCCACAGTCAGCTACTAGG 57.855 55.000 0.00 0.00 35.76 3.02
979 1052 0.908198 GATCCTTCCCACAGTCAGCT 59.092 55.000 0.00 0.00 0.00 4.24
987 1060 0.541863 ACACCATCGATCCTTCCCAC 59.458 55.000 0.00 0.00 0.00 4.61
992 1065 2.169352 CTCTTCCACACCATCGATCCTT 59.831 50.000 0.00 0.00 0.00 3.36
1228 1316 3.809374 GAACATAGAGCGCCGGGGG 62.809 68.421 21.35 6.75 0.00 5.40
1246 1334 0.315382 GCAAAGCAGCATACGCGTAG 60.315 55.000 24.78 16.59 45.49 3.51
1247 1335 0.739462 AGCAAAGCAGCATACGCGTA 60.739 50.000 22.94 22.94 45.49 4.42
1249 1337 0.454957 AAAGCAAAGCAGCATACGCG 60.455 50.000 3.53 3.53 45.49 6.01
1250 1338 0.986992 CAAAGCAAAGCAGCATACGC 59.013 50.000 0.00 0.00 36.85 4.42
1251 1339 0.986992 GCAAAGCAAAGCAGCATACG 59.013 50.000 0.00 0.00 36.85 3.06
1252 1340 1.723003 GTGCAAAGCAAAGCAGCATAC 59.277 47.619 0.00 0.00 41.47 2.39
1253 1341 1.666599 CGTGCAAAGCAAAGCAGCATA 60.667 47.619 0.00 0.00 41.47 3.14
1254 1342 0.942410 CGTGCAAAGCAAAGCAGCAT 60.942 50.000 0.00 0.00 41.47 3.79
1255 1343 1.589461 CGTGCAAAGCAAAGCAGCA 60.589 52.632 0.00 0.00 41.47 4.41
1256 1344 2.935446 GCGTGCAAAGCAAAGCAGC 61.935 57.895 10.18 0.00 42.41 5.25
1257 1345 2.641783 CGCGTGCAAAGCAAAGCAG 61.642 57.895 14.60 8.74 43.29 4.24
1258 1346 2.654724 CGCGTGCAAAGCAAAGCA 60.655 55.556 14.60 0.00 43.29 3.91
1259 1347 4.050719 GCGCGTGCAAAGCAAAGC 62.051 61.111 17.66 9.65 43.29 3.51
1260 1348 3.745230 CGCGCGTGCAAAGCAAAG 61.745 61.111 24.19 0.00 43.29 2.77
1261 1349 4.544689 ACGCGCGTGCAAAGCAAA 62.545 55.556 37.37 0.00 43.29 3.68
1262 1350 4.954680 GACGCGCGTGCAAAGCAA 62.955 61.111 42.90 0.00 43.29 3.91
1265 1353 2.430080 AAAGAGACGCGCGTGCAAAG 62.430 55.000 42.90 7.57 42.97 2.77
1266 1354 2.424576 GAAAGAGACGCGCGTGCAAA 62.425 55.000 42.90 0.00 42.97 3.68
1267 1355 2.938823 GAAAGAGACGCGCGTGCAA 61.939 57.895 42.90 0.00 42.97 4.08
1268 1356 3.403057 GAAAGAGACGCGCGTGCA 61.403 61.111 42.90 0.00 42.97 4.57
1269 1357 4.135493 GGAAAGAGACGCGCGTGC 62.135 66.667 42.90 30.25 37.91 5.34
1270 1358 2.733218 TGGAAAGAGACGCGCGTG 60.733 61.111 42.90 19.78 0.00 5.34
1271 1359 2.694829 AAGTGGAAAGAGACGCGCGT 62.695 55.000 38.52 38.52 0.00 6.01
1272 1360 1.557443 AAAGTGGAAAGAGACGCGCG 61.557 55.000 30.96 30.96 0.00 6.86
1273 1361 0.164002 GAAAGTGGAAAGAGACGCGC 59.836 55.000 5.73 0.00 0.00 6.86
1274 1362 0.435008 CGAAAGTGGAAAGAGACGCG 59.565 55.000 3.53 3.53 0.00 6.01
1275 1363 1.779569 TCGAAAGTGGAAAGAGACGC 58.220 50.000 0.00 0.00 0.00 5.19
1276 1364 4.992381 AATTCGAAAGTGGAAAGAGACG 57.008 40.909 0.00 0.00 0.00 4.18
1277 1365 6.725246 TCAAAATTCGAAAGTGGAAAGAGAC 58.275 36.000 0.00 0.00 0.00 3.36
1278 1366 6.935741 TCAAAATTCGAAAGTGGAAAGAGA 57.064 33.333 0.00 0.00 0.00 3.10
1279 1367 6.140737 CGTTCAAAATTCGAAAGTGGAAAGAG 59.859 38.462 0.00 0.00 0.00 2.85
1280 1368 5.968848 CGTTCAAAATTCGAAAGTGGAAAGA 59.031 36.000 0.00 0.00 0.00 2.52
1281 1369 5.331532 GCGTTCAAAATTCGAAAGTGGAAAG 60.332 40.000 0.00 6.09 0.00 2.62
1282 1370 4.501198 GCGTTCAAAATTCGAAAGTGGAAA 59.499 37.500 0.00 0.00 0.00 3.13
1283 1371 4.039032 GCGTTCAAAATTCGAAAGTGGAA 58.961 39.130 0.00 0.00 0.00 3.53
1284 1372 3.065510 TGCGTTCAAAATTCGAAAGTGGA 59.934 39.130 0.00 0.00 0.00 4.02
1285 1373 3.367607 TGCGTTCAAAATTCGAAAGTGG 58.632 40.909 0.00 0.00 0.00 4.00
1286 1374 5.559694 AATGCGTTCAAAATTCGAAAGTG 57.440 34.783 0.00 0.54 0.00 3.16
1287 1375 5.746245 TGAAATGCGTTCAAAATTCGAAAGT 59.254 32.000 0.00 0.00 43.43 2.66
1309 1397 5.586339 TGAGCACGAACATTTGAAAAATGA 58.414 33.333 17.25 0.00 0.00 2.57
1348 1436 3.639094 AGGATGTACTCGGATTTCTCTGG 59.361 47.826 0.00 0.00 0.00 3.86
1360 1448 2.293955 GTCCGGAAGCTAGGATGTACTC 59.706 54.545 5.23 0.00 38.97 2.59
1385 1475 7.752686 GTGCTGTACTACTAACTGTAAACTACC 59.247 40.741 0.00 0.00 0.00 3.18
1414 1507 2.746362 CCAGCTTCATGTCTTGGTTCTC 59.254 50.000 0.00 0.00 0.00 2.87
1473 1566 2.490991 GACCGGTAGTAATGGATTGCC 58.509 52.381 7.34 0.00 0.00 4.52
1479 1572 4.950205 ATTACTGGACCGGTAGTAATGG 57.050 45.455 29.53 11.89 44.27 3.16
1545 1638 9.855021 CCTAATGTCAGAACCGAATTTTAAATT 57.145 29.630 2.23 2.23 0.00 1.82
1546 1639 8.466798 CCCTAATGTCAGAACCGAATTTTAAAT 58.533 33.333 0.00 0.00 0.00 1.40
1547 1640 7.449086 ACCCTAATGTCAGAACCGAATTTTAAA 59.551 33.333 0.00 0.00 0.00 1.52
1548 1641 6.943718 ACCCTAATGTCAGAACCGAATTTTAA 59.056 34.615 0.00 0.00 0.00 1.52
1549 1642 6.373216 CACCCTAATGTCAGAACCGAATTTTA 59.627 38.462 0.00 0.00 0.00 1.52
1550 1643 5.183140 CACCCTAATGTCAGAACCGAATTTT 59.817 40.000 0.00 0.00 0.00 1.82
1551 1644 4.700213 CACCCTAATGTCAGAACCGAATTT 59.300 41.667 0.00 0.00 0.00 1.82
1552 1645 4.261801 CACCCTAATGTCAGAACCGAATT 58.738 43.478 0.00 0.00 0.00 2.17
1553 1646 3.873910 CACCCTAATGTCAGAACCGAAT 58.126 45.455 0.00 0.00 0.00 3.34
1554 1647 2.614481 GCACCCTAATGTCAGAACCGAA 60.614 50.000 0.00 0.00 0.00 4.30
1555 1648 1.066430 GCACCCTAATGTCAGAACCGA 60.066 52.381 0.00 0.00 0.00 4.69
1556 1649 1.369625 GCACCCTAATGTCAGAACCG 58.630 55.000 0.00 0.00 0.00 4.44
1557 1650 1.282157 AGGCACCCTAATGTCAGAACC 59.718 52.381 0.00 0.00 28.47 3.62
1558 1651 2.789409 AGGCACCCTAATGTCAGAAC 57.211 50.000 0.00 0.00 28.47 3.01
1559 1652 3.806949 AAAGGCACCCTAATGTCAGAA 57.193 42.857 0.00 0.00 31.13 3.02
1658 1751 4.877823 GCAGACATGTGGAATCTACAATGA 59.122 41.667 1.15 0.00 0.00 2.57
1785 1879 2.427245 CCCCGCAGTCCGATCTTCT 61.427 63.158 0.00 0.00 40.02 2.85
1838 1932 1.192803 GGTTCCCGTCCTTGAGTCCT 61.193 60.000 0.00 0.00 0.00 3.85
1853 1947 1.154413 CGCTGCGAATGTGTGGTTC 60.154 57.895 18.66 0.00 0.00 3.62
1952 2046 3.563479 GGTTGGGTGGGTCTAATTGATGT 60.563 47.826 0.00 0.00 0.00 3.06
1954 2048 2.926329 AGGTTGGGTGGGTCTAATTGAT 59.074 45.455 0.00 0.00 0.00 2.57
1955 2049 2.354328 AGGTTGGGTGGGTCTAATTGA 58.646 47.619 0.00 0.00 0.00 2.57
1956 2050 2.899303 AGGTTGGGTGGGTCTAATTG 57.101 50.000 0.00 0.00 0.00 2.32
1957 2051 2.241430 GCTAGGTTGGGTGGGTCTAATT 59.759 50.000 0.00 0.00 0.00 1.40
1958 2052 1.844497 GCTAGGTTGGGTGGGTCTAAT 59.156 52.381 0.00 0.00 0.00 1.73
1959 2053 1.203389 AGCTAGGTTGGGTGGGTCTAA 60.203 52.381 0.00 0.00 0.00 2.10
1961 2055 1.161113 AGCTAGGTTGGGTGGGTCT 59.839 57.895 0.00 0.00 0.00 3.85
1962 2056 1.299976 CAGCTAGGTTGGGTGGGTC 59.700 63.158 0.00 0.00 0.00 4.46
1965 2059 0.323725 ATTGCAGCTAGGTTGGGTGG 60.324 55.000 0.00 0.00 33.43 4.61
1966 2060 0.813184 CATTGCAGCTAGGTTGGGTG 59.187 55.000 0.00 0.00 35.58 4.61
1968 2062 0.813184 CACATTGCAGCTAGGTTGGG 59.187 55.000 0.00 0.00 0.00 4.12
1984 2085 4.923281 CACATTCAGATTCGTGACTACACA 59.077 41.667 0.00 0.00 46.20 3.72
1985 2086 4.923871 ACACATTCAGATTCGTGACTACAC 59.076 41.667 0.00 0.00 42.88 2.90
1987 2088 5.287274 CAGACACATTCAGATTCGTGACTAC 59.713 44.000 0.00 0.00 33.67 2.73
1988 2089 5.402398 CAGACACATTCAGATTCGTGACTA 58.598 41.667 0.00 0.00 33.67 2.59
1990 2091 3.181526 GCAGACACATTCAGATTCGTGAC 60.182 47.826 0.00 0.00 33.56 3.67
1991 2092 2.995939 GCAGACACATTCAGATTCGTGA 59.004 45.455 0.00 0.00 33.56 4.35
1992 2093 2.222663 CGCAGACACATTCAGATTCGTG 60.223 50.000 0.00 0.00 35.48 4.35
1993 2094 1.995484 CGCAGACACATTCAGATTCGT 59.005 47.619 0.00 0.00 0.00 3.85
1995 2096 3.620374 ACATCGCAGACACATTCAGATTC 59.380 43.478 0.00 0.00 42.51 2.52
1996 2097 3.603532 ACATCGCAGACACATTCAGATT 58.396 40.909 0.00 0.00 42.51 2.40
1997 2098 3.257469 ACATCGCAGACACATTCAGAT 57.743 42.857 0.00 0.00 42.51 2.90
1998 2099 2.749280 ACATCGCAGACACATTCAGA 57.251 45.000 0.00 0.00 42.51 3.27
1999 2100 3.867493 ACATACATCGCAGACACATTCAG 59.133 43.478 0.00 0.00 42.51 3.02
2000 2101 3.618150 CACATACATCGCAGACACATTCA 59.382 43.478 0.00 0.00 42.51 2.57
2001 2102 3.544834 GCACATACATCGCAGACACATTC 60.545 47.826 0.00 0.00 42.51 2.67
2002 2103 2.352651 GCACATACATCGCAGACACATT 59.647 45.455 0.00 0.00 42.51 2.71
2003 2104 1.935873 GCACATACATCGCAGACACAT 59.064 47.619 0.00 0.00 42.51 3.21
2004 2105 1.358877 GCACATACATCGCAGACACA 58.641 50.000 0.00 0.00 42.51 3.72
2005 2106 0.298707 CGCACATACATCGCAGACAC 59.701 55.000 0.00 0.00 42.51 3.67
2006 2107 2.664567 CGCACATACATCGCAGACA 58.335 52.632 0.00 0.00 42.51 3.41
2011 2112 2.377587 TGCATGCGCACATACATCGC 62.378 55.000 14.90 6.09 45.36 4.58
2012 2113 0.383860 CTGCATGCGCACATACATCG 60.384 55.000 14.90 0.00 45.36 3.84
2013 2114 0.939419 TCTGCATGCGCACATACATC 59.061 50.000 14.90 0.00 45.36 3.06
2014 2115 0.659427 GTCTGCATGCGCACATACAT 59.341 50.000 14.90 0.00 45.36 2.29
2015 2116 0.673022 TGTCTGCATGCGCACATACA 60.673 50.000 14.90 13.69 45.36 2.29
2016 2117 0.247814 GTGTCTGCATGCGCACATAC 60.248 55.000 24.99 10.97 45.36 2.39
2017 2118 1.368345 GGTGTCTGCATGCGCACATA 61.368 55.000 28.36 0.00 45.36 2.29
2177 2278 2.904697 GTACCATACCAGTACCAGGC 57.095 55.000 2.00 0.00 35.15 4.85
2249 2357 1.714794 GTACACGATGAGCTGCAGTT 58.285 50.000 16.64 9.79 0.00 3.16
2461 2569 1.479323 TCAGTTGGGATGGTAGTACGC 59.521 52.381 0.00 0.00 0.00 4.42
2486 2594 9.579768 TGCGATGCTATTTTGTTTATTTTGTAT 57.420 25.926 0.00 0.00 0.00 2.29
2505 2613 1.297158 GATCAGTGCGTTGCGATGC 60.297 57.895 11.50 11.50 38.31 3.91
2531 2639 7.573843 CGCTCCTTTTGTCTATCATCAAGTTTT 60.574 37.037 0.00 0.00 0.00 2.43
2638 2746 0.616111 ATCCTCAGCTCCCTGTCGTT 60.616 55.000 0.00 0.00 40.09 3.85
2673 2781 0.037605 ACGAGTTCATCACCGGTTCC 60.038 55.000 2.97 0.00 0.00 3.62
2676 2784 1.590147 GGACGAGTTCATCACCGGT 59.410 57.895 0.00 0.00 0.00 5.28
2808 2916 5.471456 GCCAATCAATAGTAGGATGGACAAG 59.529 44.000 0.00 0.00 0.00 3.16
2824 2939 1.330234 TCAAGCAGCTTGCCAATCAA 58.670 45.000 27.78 8.22 46.52 2.57
2830 2945 0.737219 ATCGAATCAAGCAGCTTGCC 59.263 50.000 27.78 17.88 46.52 4.52
2833 2948 4.025396 CGTATGAATCGAATCAAGCAGCTT 60.025 41.667 7.36 0.21 32.06 3.74
2865 2980 6.641169 TCACCTGCACACAAATTATGTTAA 57.359 33.333 0.00 0.00 41.46 2.01
2890 3005 4.142160 ACAACAGCTGTGCTCGATATCTTA 60.142 41.667 22.49 0.00 36.40 2.10
2938 3053 1.153489 CCCCTGTCTGCTGATCACG 60.153 63.158 0.00 0.00 0.00 4.35
2941 3056 1.524482 GGTCCCCTGTCTGCTGATC 59.476 63.158 0.00 0.00 0.00 2.92
2962 3077 7.523293 TGTGAATGGTTGTGATGAATAAACT 57.477 32.000 0.00 0.00 0.00 2.66
3008 3123 0.830648 CTGGAGCCGGAACAGGAATA 59.169 55.000 5.05 0.00 0.00 1.75
3049 3174 6.054941 GGGAAAAACCAGATCAAAATTGTGT 58.945 36.000 0.00 0.00 41.20 3.72
3051 3176 6.327365 AGAGGGAAAAACCAGATCAAAATTGT 59.673 34.615 0.00 0.00 41.20 2.71
3056 3181 5.536161 CAGAAGAGGGAAAAACCAGATCAAA 59.464 40.000 0.00 0.00 41.20 2.69
3065 3190 2.560105 AGCATGCAGAAGAGGGAAAAAC 59.440 45.455 21.98 0.00 0.00 2.43
3071 3196 1.676529 CATCAAGCATGCAGAAGAGGG 59.323 52.381 21.98 4.89 0.00 4.30
3218 3345 1.108727 CCCCAGAAAGTTGCACTGCA 61.109 55.000 0.00 0.00 36.47 4.41
3227 3354 3.165071 CAATAGTTTGCCCCCAGAAAGT 58.835 45.455 0.00 0.00 0.00 2.66
3345 3485 1.199097 CCAACCAACCATACGTGAAGC 59.801 52.381 0.00 0.00 0.00 3.86
3346 3486 1.199097 GCCAACCAACCATACGTGAAG 59.801 52.381 0.00 0.00 0.00 3.02
3353 3494 2.008242 AGCAAAGCCAACCAACCATA 57.992 45.000 0.00 0.00 0.00 2.74
3627 3770 3.368822 TGCTGATGGGCACAAAGC 58.631 55.556 17.73 17.73 44.65 3.51
3633 3776 0.107066 CATACTGGTGCTGATGGGCA 60.107 55.000 0.00 0.00 40.15 5.36
3634 3777 0.820891 CCATACTGGTGCTGATGGGC 60.821 60.000 0.00 0.00 36.06 5.36
3635 3778 0.820891 GCCATACTGGTGCTGATGGG 60.821 60.000 2.17 0.00 40.46 4.00
3637 3780 1.402968 GTTGCCATACTGGTGCTGATG 59.597 52.381 0.00 0.00 40.46 3.07
3638 3781 1.683011 GGTTGCCATACTGGTGCTGAT 60.683 52.381 0.00 0.00 40.46 2.90
3640 3783 0.608856 TGGTTGCCATACTGGTGCTG 60.609 55.000 0.00 0.00 40.46 4.41
3642 3785 1.315257 CCTGGTTGCCATACTGGTGC 61.315 60.000 0.00 0.00 40.46 5.01
3645 3788 0.611618 TTGCCTGGTTGCCATACTGG 60.612 55.000 0.00 0.00 41.55 4.00
3651 3794 0.544833 ATTCCATTGCCTGGTTGCCA 60.545 50.000 0.00 0.00 46.08 4.92
3658 3801 4.641396 TCGTAAGGATATTCCATTGCCTG 58.359 43.478 0.00 0.00 39.61 4.85
3659 3802 4.974645 TCGTAAGGATATTCCATTGCCT 57.025 40.909 0.00 0.00 39.61 4.75
3678 3821 6.870439 TCTGCATGGAGATCATAGTAAAATCG 59.130 38.462 13.58 0.00 34.12 3.34
3695 3838 1.676746 CAGGGACAGAATCTGCATGG 58.323 55.000 10.62 0.00 34.37 3.66
3728 3871 2.404789 GTGGCGATGGTTGCGATG 59.595 61.111 0.00 0.00 0.00 3.84
3771 3914 2.740055 GGTGAGCAGTGTGGCGAG 60.740 66.667 0.00 0.00 39.27 5.03
3789 3932 3.750130 GCAATAAGCGATGATGTGGAGAT 59.250 43.478 0.00 0.00 0.00 2.75
3806 3949 2.112928 ATGGCGCCGGATGCAATA 59.887 55.556 23.90 0.00 41.33 1.90
3888 4032 1.620819 ACACCAGGTAGCAGAGTTGAG 59.379 52.381 0.00 0.00 0.00 3.02
3967 4111 2.099756 AGACAACAGCGATCGATCATCA 59.900 45.455 24.40 0.00 0.00 3.07
4170 4315 1.141881 CTCCGAGTACGCAATGGCT 59.858 57.895 0.00 0.00 38.10 4.75
4210 4355 3.502488 GGGTAGTAGGGATCAGCCTGTAT 60.502 52.174 1.03 0.00 36.66 2.29
4259 4407 0.877649 CTGCATCGGCGTAATCTGCT 60.878 55.000 6.85 0.00 45.35 4.24
4260 4408 0.875908 TCTGCATCGGCGTAATCTGC 60.876 55.000 6.85 10.11 45.35 4.26
4261 4409 1.788258 ATCTGCATCGGCGTAATCTG 58.212 50.000 6.85 0.00 45.35 2.90
4268 4416 2.137425 TACCGGTATCTGCATCGGCG 62.137 60.000 11.16 0.00 45.65 6.46
4322 4470 2.044946 GCTTCCCATCCAACGCCT 60.045 61.111 0.00 0.00 0.00 5.52
4341 4489 0.249398 GGTACTCCATTGCGGTCAGT 59.751 55.000 0.00 0.00 35.57 3.41
4350 4498 6.049955 TCAAAGAAAGATCGGTACTCCATT 57.950 37.500 0.00 0.00 0.00 3.16
4388 4536 2.341846 AAACGCAGGGAGAAACTTCA 57.658 45.000 0.00 0.00 0.00 3.02
4389 4537 5.372547 AATAAAACGCAGGGAGAAACTTC 57.627 39.130 0.00 0.00 0.00 3.01
4390 4538 5.508994 CCAAATAAAACGCAGGGAGAAACTT 60.509 40.000 0.00 0.00 0.00 2.66
4391 4539 4.022329 CCAAATAAAACGCAGGGAGAAACT 60.022 41.667 0.00 0.00 0.00 2.66
4400 4548 2.817258 TGGAGACCCAAATAAAACGCAG 59.183 45.455 0.00 0.00 40.09 5.18
4413 4561 1.603172 CGACGATAAGCATGGAGACCC 60.603 57.143 0.00 0.00 0.00 4.46
4441 4589 3.181500 GGTGTAACGAAAATGATGGCTCC 60.181 47.826 0.00 0.00 38.12 4.70
4445 4593 4.094887 CCAGAGGTGTAACGAAAATGATGG 59.905 45.833 0.00 0.00 38.12 3.51
4447 4595 5.160607 TCCAGAGGTGTAACGAAAATGAT 57.839 39.130 0.00 0.00 38.12 2.45
4453 4601 1.899814 AGCATCCAGAGGTGTAACGAA 59.100 47.619 0.00 0.00 38.12 3.85
4519 4667 3.249320 GCTTCATGATAATCTGCGCTTCA 59.751 43.478 9.73 2.63 0.00 3.02
4525 4673 4.275196 TCTTGCAGCTTCATGATAATCTGC 59.725 41.667 21.75 21.75 44.79 4.26
4569 4717 2.100584 AGAGCACTCGATCATGAAGACC 59.899 50.000 0.00 0.00 34.09 3.85
4586 4734 4.347813 GTCAGTTGATAAGTCTCGAGAGC 58.652 47.826 17.22 10.96 0.00 4.09
4604 4752 8.087982 ACAGCATAAATAATACAATCGGTCAG 57.912 34.615 0.00 0.00 0.00 3.51
4615 4763 6.970043 GCCACGTTTCAACAGCATAAATAATA 59.030 34.615 0.00 0.00 0.00 0.98
4626 4774 0.030504 TGCATGCCACGTTTCAACAG 59.969 50.000 16.68 0.00 0.00 3.16
4627 4775 0.672889 ATGCATGCCACGTTTCAACA 59.327 45.000 16.68 0.00 0.00 3.33
4629 4777 0.038435 CCATGCATGCCACGTTTCAA 60.038 50.000 21.69 0.00 0.00 2.69
4632 4780 0.173935 CATCCATGCATGCCACGTTT 59.826 50.000 21.69 0.00 0.00 3.60
4633 4781 1.811195 CATCCATGCATGCCACGTT 59.189 52.632 21.69 0.00 0.00 3.99
4634 4782 3.516806 CATCCATGCATGCCACGT 58.483 55.556 21.69 1.66 0.00 4.49
4667 4817 2.361757 CAGCCACAACATGTTTCTTCCA 59.638 45.455 8.77 0.00 0.00 3.53
4796 4946 4.649674 AGGATTGCAAGCATGATCTCAAAT 59.350 37.500 17.68 0.00 0.00 2.32
4832 4982 1.224075 CTGCAGACGCTTGGGATATG 58.776 55.000 8.42 0.00 39.64 1.78
4871 5021 2.502295 GATCAGAGCATTGGGATGGAC 58.498 52.381 0.00 0.00 33.72 4.02
4873 5023 1.071228 TCGATCAGAGCATTGGGATGG 59.929 52.381 0.00 0.00 33.72 3.51
4878 5028 1.531578 CTGCATCGATCAGAGCATTGG 59.468 52.381 15.57 0.52 34.33 3.16
4918 5072 5.477607 TGGTCGATATCATTTATCCCGTT 57.522 39.130 3.12 0.00 0.00 4.44
4919 5073 4.081642 CCTGGTCGATATCATTTATCCCGT 60.082 45.833 3.12 0.00 0.00 5.28
4926 5080 3.045634 TCCCACCTGGTCGATATCATTT 58.954 45.455 0.00 0.00 34.77 2.32
4938 5092 2.038329 TCCGGTAGTCCCACCTGG 59.962 66.667 0.00 0.00 36.35 4.45
4959 5113 2.350895 CACGATCCCCACTGCCAA 59.649 61.111 0.00 0.00 0.00 4.52
4961 5115 4.101448 AGCACGATCCCCACTGCC 62.101 66.667 0.00 0.00 0.00 4.85
4964 5118 1.826024 GATGAGCACGATCCCCACT 59.174 57.895 0.00 0.00 0.00 4.00
4967 5121 2.029666 CCGATGAGCACGATCCCC 59.970 66.667 0.00 0.00 0.00 4.81
5010 5164 2.253758 GCGACAGGAACAGCAGCAA 61.254 57.895 0.00 0.00 0.00 3.91
5054 5208 0.321653 GGTGCACCTCCTTGTACTGG 60.322 60.000 29.12 0.00 33.04 4.00
5378 5532 4.778143 GCCACCCGCTTCACCGAT 62.778 66.667 0.00 0.00 0.00 4.18
5568 5722 4.537433 GAGGCAGGCGGCGAAGAT 62.537 66.667 12.98 0.00 46.16 2.40
5619 5785 3.894947 GACCTCCTCGAGCTCGCC 61.895 72.222 30.97 9.59 39.60 5.54
5620 5786 4.244802 CGACCTCCTCGAGCTCGC 62.245 72.222 30.97 13.99 46.14 5.03
6013 6179 1.378762 CCGCTCCTTTTCCCCTTGA 59.621 57.895 0.00 0.00 0.00 3.02
6159 6333 6.182627 TCTTATTCTCATGTCACTTGCCAAT 58.817 36.000 0.00 0.00 0.00 3.16
6208 6382 9.466497 TGCTTATCCAGTTGATTCTATCTTTTT 57.534 29.630 0.00 0.00 34.76 1.94
6209 6383 9.118300 CTGCTTATCCAGTTGATTCTATCTTTT 57.882 33.333 0.00 0.00 34.76 2.27
6210 6384 7.718753 CCTGCTTATCCAGTTGATTCTATCTTT 59.281 37.037 0.00 0.00 34.76 2.52
6223 6397 2.644798 ACTTGTTCCCTGCTTATCCAGT 59.355 45.455 0.00 0.00 0.00 4.00
6304 6507 3.880047 TGCTACCACACATACACCTAC 57.120 47.619 0.00 0.00 0.00 3.18
6492 6747 7.890655 ACTCCCTTTGCAAAGAAATATAAGAGT 59.109 33.333 35.25 25.76 38.28 3.24
6495 6750 8.122952 CGTACTCCCTTTGCAAAGAAATATAAG 58.877 37.037 35.25 22.10 38.28 1.73
6508 6763 6.913873 TTCAATAATACGTACTCCCTTTGC 57.086 37.500 0.00 0.00 0.00 3.68
6513 6768 5.699458 CACCCATTCAATAATACGTACTCCC 59.301 44.000 0.00 0.00 0.00 4.30
6607 6874 8.593842 CAATTTCATGATTATAAGTGCGCAAAA 58.406 29.630 14.00 4.36 0.00 2.44
6613 6880 8.758715 GCCTTTCAATTTCATGATTATAAGTGC 58.241 33.333 0.00 0.00 0.00 4.40
6620 6887 6.979817 CGAATGGCCTTTCAATTTCATGATTA 59.020 34.615 26.03 0.00 0.00 1.75
6681 6949 7.870445 GCTAGGATGCTCTTACAATATATAGGC 59.130 40.741 0.00 0.00 0.00 3.93
6769 7038 3.966665 TCTTTGTTTGAGCCCCAAAAGAT 59.033 39.130 3.78 0.00 45.40 2.40
6793 7062 4.816048 TGATAGGACCTACTGGATCACT 57.184 45.455 2.46 0.00 37.04 3.41
6818 7087 5.048846 TGGGTGCCTTCCTATTTTAGATC 57.951 43.478 0.00 0.00 0.00 2.75
6884 7153 1.029408 TCGCAATGACCGAAATGGGG 61.029 55.000 0.00 0.00 44.64 4.96
6913 7182 4.177026 ACGACCGAATTTCTCTCTCATTG 58.823 43.478 0.00 0.00 0.00 2.82
6916 7185 2.163815 GGACGACCGAATTTCTCTCTCA 59.836 50.000 0.00 0.00 0.00 3.27
6946 7215 2.412323 CCTACGCACTCTACCGCCA 61.412 63.158 0.00 0.00 0.00 5.69
6961 7230 0.542938 AGACTGACTGTGGCTGCCTA 60.543 55.000 21.03 8.11 0.00 3.93
7011 7280 4.885325 GGACAAAGGTTGAAGGTGTAAAGA 59.115 41.667 0.00 0.00 0.00 2.52
7030 7299 1.212934 AGACGGAGAGGTAGGGGACA 61.213 60.000 0.00 0.00 0.00 4.02
7031 7300 0.466007 GAGACGGAGAGGTAGGGGAC 60.466 65.000 0.00 0.00 0.00 4.46
7037 7306 0.034380 CAGGGTGAGACGGAGAGGTA 60.034 60.000 0.00 0.00 0.00 3.08
7087 7356 4.635699 TGTCCTCCATAGCTATACTCGA 57.364 45.455 5.77 0.00 0.00 4.04
7098 7367 3.775866 TCGTGGGTAATTTGTCCTCCATA 59.224 43.478 0.00 0.00 0.00 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.