AutoCloner

Multiple sequence alignment - TraesCS3B01G173900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS3B01G173900	chr3B	100.000	4753	0	0	1	4753	174199236	174203988	0.000000e+00	8778.0
1	TraesCS3B01G173900	chr3B	81.743	241	30	5	606	832	37633149	37633389	6.280000e-44	189.0
2	TraesCS3B01G173900	chr3D	94.622	2696	92	16	1323	3989	122569505	122572176	0.000000e+00	4126.0
3	TraesCS3B01G173900	chr3D	95.652	483	17	2	841	1323	122568843	122569321	0.000000e+00	773.0
4	TraesCS3B01G173900	chr3D	93.939	330	18	2	4425	4753	122581110	122581438	9.190000e-137	497.0
5	TraesCS3B01G173900	chr3D	94.510	255	6	4	3986	4239	122572231	122572478	2.070000e-103	387.0
6	TraesCS3B01G173900	chr3D	97.475	198	4	1	4234	4430	122579195	122579392	2.120000e-88	337.0
7	TraesCS3B01G173900	chr3D	80.822	438	72	10	1	431	332416231	332415799	2.740000e-87	333.0
8	TraesCS3B01G173900	chr3D	84.127	126	20	0	715	840	6992998	6993123	6.460000e-24	122.0
9	TraesCS3B01G173900	chr7A	93.456	2338	88	23	835	3143	594660531	594662832	0.000000e+00	3410.0
10	TraesCS3B01G173900	chr7A	90.470	1595	102	29	3171	4753	594662828	594664384	0.000000e+00	2058.0
11	TraesCS3B01G173900	chr7A	81.884	138	25	0	698	835	7791470	7791607	3.010000e-22	117.0
12	TraesCS3B01G173900	chr7A	79.091	110	16	6	4397	4501	48021937	48022044	8.530000e-08	69.4
13	TraesCS3B01G173900	chr3A	90.921	1498	75	26	3127	4582	128298752	128300230	0.000000e+00	1956.0
14	TraesCS3B01G173900	chr3A	94.484	852	40	3	1382	2231	128293665	128294511	0.000000e+00	1306.0
15	TraesCS3B01G173900	chr3A	93.673	490	25	5	835	1323	128293069	128293553	0.000000e+00	728.0
16	TraesCS3B01G173900	chr3A	94.891	274	14	0	2624	2897	128297515	128297788	3.400000e-116	429.0
17	TraesCS3B01G173900	chr3A	80.866	439	69	10	1	431	738081255	738080824	9.860000e-87	331.0
18	TraesCS3B01G173900	chr3A	89.804	255	17	5	2355	2607	128295077	128295324	7.680000e-83	318.0
19	TraesCS3B01G173900	chr3A	94.857	175	7	2	2916	3090	128298577	128298749	6.060000e-69	272.0
20	TraesCS3B01G173900	chr3A	78.878	303	52	10	536	836	180417423	180417715	1.350000e-45	195.0
21	TraesCS3B01G173900	chr3A	84.167	120	19	0	716	835	732083671	732083552	3.010000e-22	117.0
22	TraesCS3B01G173900	chr3A	100.000	28	0	0	4628	4655	8260791	8260818	9.000000e-03	52.8
23	TraesCS3B01G173900	chr6B	97.027	841	24	1	1	840	144917949	144918789	0.000000e+00	1413.0
24	TraesCS3B01G173900	chr5A	95.402	435	18	2	4	436	622996593	622996159	0.000000e+00	691.0
25	TraesCS3B01G173900	chr5A	84.677	124	17	2	711	833	4954286	4954164	6.460000e-24	122.0
26	TraesCS3B01G173900	chr5A	79.330	179	30	7	4315	4488	378559569	378559745	8.360000e-23	119.0
27	TraesCS3B01G173900	chr5A	78.109	201	32	12	4314	4507	29122399	29122594	3.010000e-22	117.0
28	TraesCS3B01G173900	chr2A	95.205	438	19	2	1	436	118219477	118219914	0.000000e+00	691.0
29	TraesCS3B01G173900	chr7B	94.872	273	11	3	165	436	417893551	417893821	1.580000e-114	424.0
30	TraesCS3B01G173900	chr6D	81.265	427	66	12	1	420	467819957	467820376	2.740000e-87	333.0
31	TraesCS3B01G173900	chr2D	81.265	427	64	14	1	419	478113118	478112700	9.860000e-87	331.0
32	TraesCS3B01G173900	chr4D	80.638	439	71	11	1	431	20459618	20459186	1.280000e-85	327.0
33	TraesCS3B01G173900	chr2B	82.039	206	26	7	638	833	779966056	779966260	1.060000e-36	165.0
34	TraesCS3B01G173900	chr6A	85.417	144	21	0	692	835	80883862	80884005	2.960000e-32	150.0
35	TraesCS3B01G173900	chr6A	83.740	123	19	1	716	837	88852765	88852643	1.080000e-21	115.0
36	TraesCS3B01G173900	chr1A	78.838	241	36	6	606	835	482827543	482827779	1.070000e-31	148.0
37	TraesCS3B01G173900	chr1A	78.659	164	31	4	4328	4488	11391081	11390919	6.510000e-19	106.0

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS3B01G173900	chr3B	174199236	174203988	4752	False	8778.000000	8778	100.000	1	4753	1	chr3B.!!$F2	4752
1	TraesCS3B01G173900	chr3D	122568843	122572478	3635	False	1762.000000	4126	94.928	841	4239	3	chr3D.!!$F2	3398
2	TraesCS3B01G173900	chr3D	122579195	122581438	2243	False	417.000000	497	95.707	4234	4753	2	chr3D.!!$F3	519
3	TraesCS3B01G173900	chr7A	594660531	594664384	3853	False	2734.000000	3410	91.963	835	4753	2	chr7A.!!$F3	3918
4	TraesCS3B01G173900	chr3A	128293069	128300230	7161	False	834.833333	1956	93.105	835	4582	6	chr3A.!!$F3	3747
5	TraesCS3B01G173900	chr6B	144917949	144918789	840	False	1413.000000	1413	97.027	1	840	1	chr6B.!!$F1	839

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
530	531	1.901464	GTTGTCCACACGCCCCAAT	60.901	57.895	0.00	0.00	0.00	3.16	F
1312	1317	0.811616	CATGGCTTACCGGAGTGCTC	60.812	60.000	9.46	3.91	39.70	4.26	F
1480	1673	1.625818	AGCTGTCCGTTCTTCTGGATT	59.374	47.619	0.00	0.00	36.48	3.01	F
3091	6714	1.123928	AGCTGCCAGAGGTATGTACC	58.876	55.000	0.00	0.81	46.82	3.34	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1834	2050	1.060553	CGCTGCATAAGGTAACACACG	59.939	52.381	0.00	0.00	41.41	4.49	R
2819	5670	1.050988	AGGCGGCAGATAGACATGGT	61.051	55.000	13.08	0.00	0.00	3.55	R
3311	6937	1.133668	GGATAACTGCAGGGCTGGAAT	60.134	52.381	19.93	0.13	0.00	3.01	R
3905	7558	1.460743	CTACTGGTGTGCGATGTGTTG	59.539	52.381	0.00	0.00	0.00	3.33	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
405	406	4.951254	TCTTAGTCAACGTTGTCCATGAA	58.049	39.130	26.47	12.23	0.00	2.57
513	514	5.586243	CGTAAATGATCATTCTTCTGGTGGT	59.414	40.000	20.95	4.48	0.00	4.16
530	531	1.901464	GTTGTCCACACGCCCCAAT	60.901	57.895	0.00	0.00	0.00	3.16
584	585	8.807581	CATCGTCCCTTGCTTTTTAATAATTTC	58.192	33.333	0.00	0.00	0.00	2.17
735	736	7.245419	CATGAAATGTGACCGTATATGAACA	57.755	36.000	0.00	0.00	40.20	3.18
737	738	7.857734	TGAAATGTGACCGTATATGAACATT	57.142	32.000	11.66	11.66	39.30	2.71
757	758	2.293170	TCGTGCAAGTTTGATGACCAA	58.707	42.857	0.00	0.00	0.00	3.67
771	772	7.456684	TTGATGACCAAAAACACGTATTTTG	57.543	32.000	22.38	22.38	43.85	2.44
817	818	2.028112	TCGCCTGCAAGTTCTATGACTT	60.028	45.455	0.00	0.00	40.37	3.01
818	819	2.744202	CGCCTGCAAGTTCTATGACTTT	59.256	45.455	0.00	0.00	37.76	2.66
1005	1010	1.207089	TCTCCAAACGCGAAGATGGAT	59.793	47.619	15.93	0.00	38.19	3.41
1120	1125	0.958876	GGTAACGCTGGTTTCCCCTG	60.959	60.000	0.00	0.00	37.56	4.45
1205	1210	1.076559	TCGCGGAGGGTTGGATCTA	60.077	57.895	6.13	0.00	42.82	1.98
1214	1219	4.210331	GAGGGTTGGATCTATTGCATTGT	58.790	43.478	0.00	0.00	0.00	2.71
1267	1272	2.579787	GATCGGACAGTGGCGTCG	60.580	66.667	0.00	0.00	36.73	5.12
1275	1280	2.359107	AGTGGCGTCGTCGTAGGA	60.359	61.111	3.66	0.00	39.49	2.94
1312	1317	0.811616	CATGGCTTACCGGAGTGCTC	60.812	60.000	9.46	3.91	39.70	4.26
1350	1539	4.340894	TTGCGTTTAATAGCAAGCTCTG	57.659	40.909	12.30	0.00	46.83	3.35
1375	1564	4.569214	AGGGTGTGCTAAGAGCCT	57.431	55.556	0.00	0.00	42.48	4.58
1376	1565	1.952621	AAGGGTGTGCTAAGAGCCTA	58.047	50.000	0.00	0.00	46.30	3.93
1377	1566	1.952621	AGGGTGTGCTAAGAGCCTAA	58.047	50.000	0.00	0.00	45.24	2.69
1406	1595	7.816031	AGATACAATGCAAATTCAGAAAAGTGG	59.184	33.333	0.00	0.00	0.00	4.00
1462	1655	6.749923	ATTACTCTGTTTCCTTCATTGAGC	57.250	37.500	0.00	0.00	0.00	4.26
1480	1673	1.625818	AGCTGTCCGTTCTTCTGGATT	59.374	47.619	0.00	0.00	36.48	3.01
1486	1679	6.683110	GCTGTCCGTTCTTCTGGATTATTAGA	60.683	42.308	0.00	0.00	36.48	2.10
1613	1808	4.217118	GCTGAAAAGAAGAAGATCAGGCAA	59.783	41.667	0.00	0.00	38.32	4.52
1642	1837	7.761651	ATGAAAAGAAAGAGAAACAAGTTGC	57.238	32.000	1.81	0.00	0.00	4.17
1691	1893	5.961272	TCATTCTCGACTGTGCTGTTTATA	58.039	37.500	0.00	0.00	0.00	0.98
1721	1923	2.414058	TTACAAATTGCACACTGGCG	57.586	45.000	0.00	0.00	36.28	5.69
1742	1944	4.811557	GCGAATACTTGCTCCTCATAAGTT	59.188	41.667	0.00	0.00	36.22	2.66
1834	2050	9.086336	CAGAAGAATAACTCTCTGAAGTTGATC	57.914	37.037	12.43	10.60	39.74	2.92
2019	2235	4.973168	ACTTATTGTTCAGGTCAGCAGAA	58.027	39.130	0.00	0.00	0.00	3.02
2157	2373	3.696051	CCTTGCTAGGCATGTACAAATGT	59.304	43.478	0.00	0.00	38.76	2.71
2282	2498	6.867662	AGTGAATTTGAGTCGATTGTTCTT	57.132	33.333	0.00	0.00	0.00	2.52
2372	3042	4.624913	TCCATCTCCCTGAAGAGTAACAT	58.375	43.478	0.00	0.00	35.28	2.71
2449	3120	9.816354	ACTTTTTGTATGTGCTAGTTTTCAAAT	57.184	25.926	0.00	0.00	0.00	2.32
2580	3257	3.259625	AGAGTGACTTAGACCTGCCTTTC	59.740	47.826	0.00	0.00	0.00	2.62
2933	6554	7.994911	ACAAGTCCTCATGCTCATTGAATAATA	59.005	33.333	0.00	0.00	0.00	0.98
2934	6555	8.843262	CAAGTCCTCATGCTCATTGAATAATAA	58.157	33.333	0.00	0.00	0.00	1.40
2970	6593	9.593134	CTGAATGTCTAAAGCTTACTCTTGTAT	57.407	33.333	0.00	0.00	0.00	2.29
3091	6714	1.123928	AGCTGCCAGAGGTATGTACC	58.876	55.000	0.00	0.81	46.82	3.34
3188	6813	7.001674	ACACTCTAATGTACACAATGGGAAAA	58.998	34.615	0.00	0.00	0.00	2.29
3231	6856	7.537715	CATTTTAGTGTATTTGATGTGCCTGA	58.462	34.615	0.00	0.00	0.00	3.86
3252	6877	5.067954	TGAGGTTGGTAGTAAAGCCTTTTC	58.932	41.667	0.00	0.00	0.00	2.29
3255	6880	5.535030	AGGTTGGTAGTAAAGCCTTTTCTTG	59.465	40.000	1.50	0.00	0.00	3.02
3311	6937	8.574251	AACATATGCAACTTACAGTTTCCATA	57.426	30.769	1.58	8.25	36.03	2.74
3439	7082	1.278985	TGATCATGGTCGTCTGCCTTT	59.721	47.619	0.59	0.00	0.00	3.11
3440	7083	2.499693	TGATCATGGTCGTCTGCCTTTA	59.500	45.455	0.59	0.00	0.00	1.85
3441	7084	3.055458	TGATCATGGTCGTCTGCCTTTAA	60.055	43.478	0.59	0.00	0.00	1.52
3442	7085	3.410631	TCATGGTCGTCTGCCTTTAAA	57.589	42.857	0.00	0.00	0.00	1.52
3443	7086	3.950397	TCATGGTCGTCTGCCTTTAAAT	58.050	40.909	0.00	0.00	0.00	1.40
3514	7163	6.040955	TCTCCTTGCTATCACGATCTGTTAAT	59.959	38.462	0.00	0.00	0.00	1.40
3515	7164	7.230712	TCTCCTTGCTATCACGATCTGTTAATA	59.769	37.037	0.00	0.00	0.00	0.98
3648	7297	7.724287	TCTTGATGATGATCTTCGAGAAATCT	58.276	34.615	20.09	0.00	37.82	2.40
3682	7331	3.370978	CACCAGTAATTTACACAGGCTCG	59.629	47.826	9.15	0.00	0.00	5.03
3905	7558	4.156008	AGAACAACTGAACAAGTGTTGACC	59.844	41.667	11.30	3.68	42.35	4.02
3996	7714	7.633361	TTCAGTCAAACGAAGTAGTACATTC	57.367	36.000	2.52	3.23	45.00	2.67
4007	7725	8.529476	ACGAAGTAGTACATTCCTAAAAGTGAT	58.471	33.333	2.52	0.00	41.94	3.06
4131	7853	4.760530	TCATGGCTAAGATGTAGCAACT	57.239	40.909	7.59	0.00	42.06	3.16
4203	7926	5.228665	GGACAGTAGACAGAACACCTAAAC	58.771	45.833	0.00	0.00	0.00	2.01
4222	7945	4.993705	AACTATGGAACCTCTGTTTCCA	57.006	40.909	6.29	6.29	36.65	3.53
4447	9924	9.933723	AAGAATTTTCCTAAGGAATCATTTGTG	57.066	29.630	0.00	0.00	41.71	3.33
4461	9938	6.682423	ATCATTTGTGCGACATTTCATAGA	57.318	33.333	0.00	0.00	0.00	1.98
4469	9946	8.262715	TGTGCGACATTTCATAGAAAATCTAA	57.737	30.769	0.00	0.00	31.96	2.10
4548	10025	9.010029	ACAAACTAAAATCGTGTAGGATTTGAT	57.990	29.630	11.83	2.68	43.81	2.57
4577	10054	4.894784	TGATATTCCTATTCCCGCACTTC	58.105	43.478	0.00	0.00	0.00	3.01
4582	10059	2.693591	TCCTATTCCCGCACTTCTACAG	59.306	50.000	0.00	0.00	0.00	2.74
4588	10065	0.108615	CCGCACTTCTACAGTCCTGG	60.109	60.000	0.00	0.00	30.92	4.45
4598	10075	7.118390	CACTTCTACAGTCCTGGTAATCAAAAG	59.882	40.741	0.00	0.00	30.92	2.27
4599	10076	6.928348	TCTACAGTCCTGGTAATCAAAAGA	57.072	37.500	0.00	0.00	34.19	2.52

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
405	406	5.194432	ACACCATGTCTCGACTATCTAACT	58.806	41.667	0.00	0.00	0.00	2.24
482	483	6.769822	AGAAGAATGATCATTTACGCCTGAAT	59.230	34.615	21.57	0.18	0.00	2.57
513	514	1.602323	GATTGGGGCGTGTGGACAA	60.602	57.895	0.00	0.00	0.00	3.18
537	538	1.566018	GGTTTCGAACTCACGGCCTG	61.566	60.000	0.00	0.00	0.00	4.85
735	736	2.884012	TGGTCATCAAACTTGCACGAAT	59.116	40.909	0.00	0.00	0.00	3.34
737	738	1.960417	TGGTCATCAAACTTGCACGA	58.040	45.000	0.00	0.00	0.00	4.35
757	758	6.529696	CACAAACTTGCAAAATACGTGTTTT	58.470	32.000	16.20	16.20	0.00	2.43
1005	1010	1.675310	CTGCGCCACATTCCCTTCA	60.675	57.895	4.18	0.00	0.00	3.02
1256	1261	2.559840	CTACGACGACGCCACTGT	59.440	61.111	7.30	0.00	43.96	3.55
1267	1272	2.609737	CCCAACACAGACTTCCTACGAC	60.610	54.545	0.00	0.00	0.00	4.34
1275	1280	1.352622	TGGAGCCCCAACACAGACTT	61.353	55.000	0.00	0.00	40.09	3.01
1312	1317	1.597937	GCAAGACAAACAACTCCAGCG	60.598	52.381	0.00	0.00	0.00	5.18
1350	1539	4.320275	GCTCTTAGCACACCCTTTTGTAAC	60.320	45.833	0.00	0.00	41.89	2.50
1462	1655	6.806751	TCTAATAATCCAGAAGAACGGACAG	58.193	40.000	0.00	0.00	33.05	3.51
1486	1679	9.577110	CACAAATCATGACAGCACTAAAATATT	57.423	29.630	0.00	0.00	0.00	1.28
1498	1692	3.442625	AGGCATCACACAAATCATGACAG	59.557	43.478	0.00	0.00	0.00	3.51
1613	1808	9.620259	ACTTGTTTCTCTTTCTTTTCATAGTCT	57.380	29.630	0.00	0.00	0.00	3.24
1721	1923	9.547753	TCAATAACTTATGAGGAGCAAGTATTC	57.452	33.333	0.00	0.00	32.35	1.75
1834	2050	1.060553	CGCTGCATAAGGTAACACACG	59.939	52.381	0.00	0.00	41.41	4.49
2019	2235	5.750352	ACAGAAAAGGATGCAAATTCCAT	57.250	34.783	7.56	0.00	35.59	3.41
2086	2302	4.935205	TGTGTGTTGGTTCATATGAGCTAC	59.065	41.667	17.72	15.59	0.00	3.58
2157	2373	1.552337	GTGTCTCATCTTGAGGGCAGA	59.448	52.381	4.78	0.00	44.39	4.26
2282	2498	4.217334	TGCGATTTTGGCTGACTAAATTCA	59.783	37.500	4.46	3.96	35.22	2.57
2353	3005	6.882768	AGAAATGTTACTCTTCAGGGAGAT	57.117	37.500	0.00	0.00	37.13	2.75
2819	5670	1.050988	AGGCGGCAGATAGACATGGT	61.051	55.000	13.08	0.00	0.00	3.55
2933	6554	8.317679	AGCTTTAGACATTCAGATCTACACTTT	58.682	33.333	0.00	0.00	0.00	2.66
2934	6555	7.846066	AGCTTTAGACATTCAGATCTACACTT	58.154	34.615	0.00	0.00	0.00	3.16
3091	6714	5.997129	ACAAGGCCAAATAAAAAGGAACATG	59.003	36.000	5.01	0.00	0.00	3.21
3092	6715	6.183361	TGACAAGGCCAAATAAAAAGGAACAT	60.183	34.615	5.01	0.00	0.00	2.71
3201	6826	9.520204	GCACATCAAATACACTAAAATGCTAAT	57.480	29.630	0.00	0.00	0.00	1.73
3231	6856	5.320488	AGAAAAGGCTTTACTACCAACCT	57.680	39.130	13.77	0.00	0.00	3.50
3311	6937	1.133668	GGATAACTGCAGGGCTGGAAT	60.134	52.381	19.93	0.13	0.00	3.01
3443	7086	9.626045	CGTAGTCATATAATATGCTCAACAGAA	57.374	33.333	0.00	0.00	0.00	3.02
3467	7115	7.204496	AGAGAAGACATATCGCTAATTACGT	57.796	36.000	0.00	0.00	0.00	3.57
3682	7331	0.112412	TTCCCCCTGACCAAAAGAGC	59.888	55.000	0.00	0.00	0.00	4.09
3886	7539	4.165779	GTTGGTCAACACTTGTTCAGTTG	58.834	43.478	8.77	0.00	42.90	3.16
3887	7540	3.823873	TGTTGGTCAACACTTGTTCAGTT	59.176	39.130	11.95	0.00	45.42	3.16
3888	7541	3.417101	TGTTGGTCAACACTTGTTCAGT	58.583	40.909	11.95	0.00	45.42	3.41
3905	7558	1.460743	CTACTGGTGTGCGATGTGTTG	59.539	52.381	0.00	0.00	0.00	3.33
4203	7926	4.286297	TGTGGAAACAGAGGTTCCATAG	57.714	45.455	18.49	0.00	44.46	2.23
4447	9924	9.374960	GATGTTAGATTTTCTATGAAATGTCGC	57.625	33.333	0.00	0.00	29.75	5.19
4548	10025	4.567537	CGGGAATAGGAATATCATGCCCAA	60.568	45.833	0.00	0.00	33.28	4.12
4577	10054	6.371825	GGTTCTTTTGATTACCAGGACTGTAG	59.628	42.308	0.00	0.00	31.34	2.74
4582	10059	4.663334	AGGGTTCTTTTGATTACCAGGAC	58.337	43.478	0.00	0.00	32.35	3.85
4588	10065	8.803235	ACAAATCCTTAGGGTTCTTTTGATTAC	58.197	33.333	0.00	0.00	0.00	1.89
4598	10075	4.673968	AGGGAAACAAATCCTTAGGGTTC	58.326	43.478	0.00	0.00	39.57	3.62
4599	10076	4.759793	AGGGAAACAAATCCTTAGGGTT	57.240	40.909	0.00	0.00	39.57	4.11
4716	10193	7.428826	CCCATTCAATTACTTTAGGATTCTGC	58.571	38.462	0.00	0.00	0.00	4.26
4719	10196	7.346751	TGCCCATTCAATTACTTTAGGATTC	57.653	36.000	0.00	0.00	0.00	2.52

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.