Multiple sequence alignment - TraesCS3B01G172800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G172800 chr3B 100.000 3845 0 0 1 3845 173127666 173123822 0.000000e+00 7101.0
1 TraesCS3B01G172800 chr3B 95.370 324 15 0 66 389 173126932 173126609 2.050000e-142 516.0
2 TraesCS3B01G172800 chr3B 95.370 324 15 0 735 1058 173127601 173127278 2.050000e-142 516.0
3 TraesCS3B01G172800 chr3B 94.578 166 6 1 582 744 173242389 173242224 1.770000e-63 254.0
4 TraesCS3B01G172800 chr3A 91.931 2652 170 25 660 3285 128079452 128076819 0.000000e+00 3672.0
5 TraesCS3B01G172800 chr3A 90.252 595 33 7 3268 3843 128069137 128068549 0.000000e+00 754.0
6 TraesCS3B01G172800 chr3A 94.161 274 16 0 116 389 128079324 128079051 5.940000e-113 418.0
7 TraesCS3B01G172800 chr3D 89.798 2480 144 33 583 3040 121728221 121725829 0.000000e+00 3077.0
8 TraesCS3B01G172800 chr3D 95.177 311 13 1 3032 3342 121693083 121692775 1.240000e-134 490.0
9 TraesCS3B01G172800 chr3D 92.216 334 18 4 61 389 121728071 121727741 2.090000e-127 466.0
10 TraesCS3B01G172800 chr3D 91.525 59 5 0 1 59 391654512 391654570 8.850000e-12 82.4
11 TraesCS3B01G172800 chr3D 92.453 53 2 1 1 53 2720048 2720098 1.480000e-09 75.0
12 TraesCS3B01G172800 chr7B 92.632 190 13 1 385 573 614345025 614345214 4.890000e-69 272.0
13 TraesCS3B01G172800 chr7B 92.105 190 14 1 385 573 195188681 195188492 2.280000e-67 267.0
14 TraesCS3B01G172800 chr7B 94.231 52 3 0 1 52 326705515 326705566 3.180000e-11 80.5
15 TraesCS3B01G172800 chr4B 92.737 179 13 0 385 563 67153785 67153607 3.810000e-65 259.0
16 TraesCS3B01G172800 chr4B 90.000 60 5 1 1 60 203110494 203110552 4.120000e-10 76.8
17 TraesCS3B01G172800 chr2D 94.340 53 3 0 1 53 204855967 204856019 8.850000e-12 82.4
18 TraesCS3B01G172800 chr2B 94.340 53 3 0 1 53 743565250 743565302 8.850000e-12 82.4
19 TraesCS3B01G172800 chr2B 92.857 56 2 1 1 56 627340420 627340367 3.180000e-11 80.5
20 TraesCS3B01G172800 chr4D 92.453 53 4 0 1 53 439163110 439163162 4.120000e-10 76.8
21 TraesCS3B01G172800 chr2A 88.525 61 6 1 1 61 473409979 473410038 5.330000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G172800 chr3B 173123822 173127666 3844 True 2711.0 7101 96.913333 1 3845 3 chr3B.!!$R2 3844
1 TraesCS3B01G172800 chr3A 128076819 128079452 2633 True 2045.0 3672 93.046000 116 3285 2 chr3A.!!$R2 3169
2 TraesCS3B01G172800 chr3A 128068549 128069137 588 True 754.0 754 90.252000 3268 3843 1 chr3A.!!$R1 575
3 TraesCS3B01G172800 chr3D 121725829 121728221 2392 True 1771.5 3077 91.007000 61 3040 2 chr3D.!!$R2 2979

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
520 521 0.032017 AGGAGGCGATAGAAGGGTGT 60.032 55.0 0.0 0.0 39.76 4.16 F
521 522 0.105039 GGAGGCGATAGAAGGGTGTG 59.895 60.0 0.0 0.0 39.76 3.82 F
544 545 0.247185 TAACGGCCCTAGTCAAACGG 59.753 55.0 0.0 0.0 0.00 4.44 F
1528 1543 0.312416 GGACGAGGACGAGGATGATG 59.688 60.0 0.0 0.0 42.66 3.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2399 2415 0.108138 ACCACCAATGAGCGCTAGTC 60.108 55.000 11.50 0.00 0.00 2.59 R
2425 2441 8.817100 CCAAAAATTAAACTTGAGAACCAGAAC 58.183 33.333 0.00 0.00 0.00 3.01 R
2524 2549 6.704289 AAATACTGCATATGCTTGATGTGT 57.296 33.333 27.13 15.54 42.66 3.72 R
3410 3451 0.518636 CCTGAGGTGTTGATGTTGCG 59.481 55.000 0.00 0.00 0.00 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 2.497770 GGTACGCGCACACCCTAT 59.502 61.111 12.27 0.00 0.00 2.57
33 34 1.735360 GGTACGCGCACACCCTATA 59.265 57.895 12.27 0.00 0.00 1.31
34 35 0.102844 GGTACGCGCACACCCTATAA 59.897 55.000 12.27 0.00 0.00 0.98
35 36 1.471327 GGTACGCGCACACCCTATAAA 60.471 52.381 12.27 0.00 0.00 1.40
36 37 1.589779 GTACGCGCACACCCTATAAAC 59.410 52.381 5.73 0.00 0.00 2.01
37 38 0.741927 ACGCGCACACCCTATAAACC 60.742 55.000 5.73 0.00 0.00 3.27
38 39 0.741574 CGCGCACACCCTATAAACCA 60.742 55.000 8.75 0.00 0.00 3.67
39 40 1.455248 GCGCACACCCTATAAACCAA 58.545 50.000 0.30 0.00 0.00 3.67
40 41 1.400494 GCGCACACCCTATAAACCAAG 59.600 52.381 0.30 0.00 0.00 3.61
41 42 2.937873 GCGCACACCCTATAAACCAAGA 60.938 50.000 0.30 0.00 0.00 3.02
42 43 2.936498 CGCACACCCTATAAACCAAGAG 59.064 50.000 0.00 0.00 0.00 2.85
43 44 3.369052 CGCACACCCTATAAACCAAGAGA 60.369 47.826 0.00 0.00 0.00 3.10
44 45 4.192317 GCACACCCTATAAACCAAGAGAG 58.808 47.826 0.00 0.00 0.00 3.20
45 46 4.081087 GCACACCCTATAAACCAAGAGAGA 60.081 45.833 0.00 0.00 0.00 3.10
46 47 5.665459 CACACCCTATAAACCAAGAGAGAG 58.335 45.833 0.00 0.00 0.00 3.20
47 48 4.717280 ACACCCTATAAACCAAGAGAGAGG 59.283 45.833 0.00 0.00 0.00 3.69
48 49 4.101741 CACCCTATAAACCAAGAGAGAGGG 59.898 50.000 2.02 2.02 46.66 4.30
49 50 4.015541 ACCCTATAAACCAAGAGAGAGGGA 60.016 45.833 10.57 0.00 44.48 4.20
50 51 4.591072 CCCTATAAACCAAGAGAGAGGGAG 59.409 50.000 0.00 0.00 44.48 4.30
51 52 5.212745 CCTATAAACCAAGAGAGAGGGAGT 58.787 45.833 0.00 0.00 0.00 3.85
52 53 6.374588 CCTATAAACCAAGAGAGAGGGAGTA 58.625 44.000 0.00 0.00 0.00 2.59
53 54 7.013834 CCTATAAACCAAGAGAGAGGGAGTAT 58.986 42.308 0.00 0.00 0.00 2.12
54 55 6.739331 ATAAACCAAGAGAGAGGGAGTATG 57.261 41.667 0.00 0.00 0.00 2.39
55 56 3.767309 ACCAAGAGAGAGGGAGTATGT 57.233 47.619 0.00 0.00 0.00 2.29
56 57 3.370104 ACCAAGAGAGAGGGAGTATGTG 58.630 50.000 0.00 0.00 0.00 3.21
57 58 3.245803 ACCAAGAGAGAGGGAGTATGTGT 60.246 47.826 0.00 0.00 0.00 3.72
58 59 3.772025 CCAAGAGAGAGGGAGTATGTGTT 59.228 47.826 0.00 0.00 0.00 3.32
59 60 4.223923 CCAAGAGAGAGGGAGTATGTGTTT 59.776 45.833 0.00 0.00 0.00 2.83
60 61 5.280215 CCAAGAGAGAGGGAGTATGTGTTTT 60.280 44.000 0.00 0.00 0.00 2.43
61 62 5.669164 AGAGAGAGGGAGTATGTGTTTTC 57.331 43.478 0.00 0.00 0.00 2.29
62 63 5.337788 AGAGAGAGGGAGTATGTGTTTTCT 58.662 41.667 0.00 0.00 0.00 2.52
63 64 5.186797 AGAGAGAGGGAGTATGTGTTTTCTG 59.813 44.000 0.00 0.00 0.00 3.02
64 65 3.935828 GAGAGGGAGTATGTGTTTTCTGC 59.064 47.826 0.00 0.00 0.00 4.26
65 66 3.010420 GAGGGAGTATGTGTTTTCTGCC 58.990 50.000 0.00 0.00 38.41 4.85
66 67 2.644798 AGGGAGTATGTGTTTTCTGCCT 59.355 45.455 0.00 0.00 42.36 4.75
67 68 3.010420 GGGAGTATGTGTTTTCTGCCTC 58.990 50.000 0.00 0.00 35.91 4.70
68 69 3.559171 GGGAGTATGTGTTTTCTGCCTCA 60.559 47.826 0.00 0.00 35.91 3.86
69 70 4.265073 GGAGTATGTGTTTTCTGCCTCAT 58.735 43.478 0.00 0.00 0.00 2.90
70 71 4.702131 GGAGTATGTGTTTTCTGCCTCATT 59.298 41.667 0.00 0.00 0.00 2.57
71 72 5.183904 GGAGTATGTGTTTTCTGCCTCATTT 59.816 40.000 0.00 0.00 0.00 2.32
72 73 6.259550 AGTATGTGTTTTCTGCCTCATTTC 57.740 37.500 0.00 0.00 0.00 2.17
73 74 6.006449 AGTATGTGTTTTCTGCCTCATTTCT 58.994 36.000 0.00 0.00 0.00 2.52
74 75 4.836125 TGTGTTTTCTGCCTCATTTCTC 57.164 40.909 0.00 0.00 0.00 2.87
75 76 4.206375 TGTGTTTTCTGCCTCATTTCTCA 58.794 39.130 0.00 0.00 0.00 3.27
76 77 4.036734 TGTGTTTTCTGCCTCATTTCTCAC 59.963 41.667 0.00 0.00 0.00 3.51
77 78 4.036734 GTGTTTTCTGCCTCATTTCTCACA 59.963 41.667 0.00 0.00 0.00 3.58
78 79 4.276678 TGTTTTCTGCCTCATTTCTCACAG 59.723 41.667 0.00 0.00 0.00 3.66
79 80 4.356405 TTTCTGCCTCATTTCTCACAGA 57.644 40.909 0.00 0.00 32.62 3.41
80 81 3.325293 TCTGCCTCATTTCTCACAGAC 57.675 47.619 0.00 0.00 0.00 3.51
81 82 2.027745 TCTGCCTCATTTCTCACAGACC 60.028 50.000 0.00 0.00 0.00 3.85
82 83 1.003580 TGCCTCATTTCTCACAGACCC 59.996 52.381 0.00 0.00 0.00 4.46
83 84 1.680249 GCCTCATTTCTCACAGACCCC 60.680 57.143 0.00 0.00 0.00 4.95
84 85 1.912043 CCTCATTTCTCACAGACCCCT 59.088 52.381 0.00 0.00 0.00 4.79
85 86 2.093235 CCTCATTTCTCACAGACCCCTC 60.093 54.545 0.00 0.00 0.00 4.30
86 87 1.909302 TCATTTCTCACAGACCCCTCC 59.091 52.381 0.00 0.00 0.00 4.30
87 88 1.065126 CATTTCTCACAGACCCCTCCC 60.065 57.143 0.00 0.00 0.00 4.30
88 89 0.104672 TTTCTCACAGACCCCTCCCA 60.105 55.000 0.00 0.00 0.00 4.37
89 90 0.836400 TTCTCACAGACCCCTCCCAC 60.836 60.000 0.00 0.00 0.00 4.61
90 91 1.536418 CTCACAGACCCCTCCCACA 60.536 63.158 0.00 0.00 0.00 4.17
91 92 1.831652 CTCACAGACCCCTCCCACAC 61.832 65.000 0.00 0.00 0.00 3.82
92 93 2.146724 CACAGACCCCTCCCACACA 61.147 63.158 0.00 0.00 0.00 3.72
93 94 2.147387 ACAGACCCCTCCCACACAC 61.147 63.158 0.00 0.00 0.00 3.82
94 95 2.923035 AGACCCCTCCCACACACG 60.923 66.667 0.00 0.00 0.00 4.49
95 96 2.920912 GACCCCTCCCACACACGA 60.921 66.667 0.00 0.00 0.00 4.35
96 97 2.446994 ACCCCTCCCACACACGAA 60.447 61.111 0.00 0.00 0.00 3.85
97 98 2.047213 GACCCCTCCCACACACGAAA 62.047 60.000 0.00 0.00 0.00 3.46
98 99 1.149627 CCCCTCCCACACACGAAAA 59.850 57.895 0.00 0.00 0.00 2.29
99 100 1.170290 CCCCTCCCACACACGAAAAC 61.170 60.000 0.00 0.00 0.00 2.43
100 101 1.503818 CCCTCCCACACACGAAAACG 61.504 60.000 0.00 0.00 0.00 3.60
101 102 0.531090 CCTCCCACACACGAAAACGA 60.531 55.000 0.00 0.00 0.00 3.85
102 103 1.292061 CTCCCACACACGAAAACGAA 58.708 50.000 0.00 0.00 0.00 3.85
103 104 1.260561 CTCCCACACACGAAAACGAAG 59.739 52.381 0.00 0.00 0.00 3.79
104 105 0.316689 CCCACACACGAAAACGAAGC 60.317 55.000 0.00 0.00 0.00 3.86
105 106 0.375454 CCACACACGAAAACGAAGCA 59.625 50.000 0.00 0.00 0.00 3.91
106 107 1.452717 CACACACGAAAACGAAGCAC 58.547 50.000 0.00 0.00 0.00 4.40
107 108 1.080298 ACACACGAAAACGAAGCACA 58.920 45.000 0.00 0.00 0.00 4.57
108 109 1.201987 ACACACGAAAACGAAGCACAC 60.202 47.619 0.00 0.00 0.00 3.82
109 110 1.080298 ACACGAAAACGAAGCACACA 58.920 45.000 0.00 0.00 0.00 3.72
110 111 1.201987 ACACGAAAACGAAGCACACAC 60.202 47.619 0.00 0.00 0.00 3.82
111 112 1.080298 ACGAAAACGAAGCACACACA 58.920 45.000 0.00 0.00 0.00 3.72
112 113 1.062002 ACGAAAACGAAGCACACACAG 59.938 47.619 0.00 0.00 0.00 3.66
113 114 1.466855 GAAAACGAAGCACACACAGC 58.533 50.000 0.00 0.00 0.00 4.40
114 115 0.100503 AAAACGAAGCACACACAGCC 59.899 50.000 0.00 0.00 0.00 4.85
115 116 0.748005 AAACGAAGCACACACAGCCT 60.748 50.000 0.00 0.00 0.00 4.58
116 117 1.160329 AACGAAGCACACACAGCCTC 61.160 55.000 0.00 0.00 0.00 4.70
117 118 2.320587 CGAAGCACACACAGCCTCC 61.321 63.158 0.00 0.00 0.00 4.30
118 119 1.072159 GAAGCACACACAGCCTCCT 59.928 57.895 0.00 0.00 0.00 3.69
119 120 0.952984 GAAGCACACACAGCCTCCTC 60.953 60.000 0.00 0.00 0.00 3.71
120 121 2.359230 GCACACACAGCCTCCTCC 60.359 66.667 0.00 0.00 0.00 4.30
121 122 3.150949 CACACACAGCCTCCTCCA 58.849 61.111 0.00 0.00 0.00 3.86
122 123 1.302033 CACACACAGCCTCCTCCAC 60.302 63.158 0.00 0.00 0.00 4.02
123 124 1.766059 ACACACAGCCTCCTCCACA 60.766 57.895 0.00 0.00 0.00 4.17
124 125 1.004080 CACACAGCCTCCTCCACAG 60.004 63.158 0.00 0.00 0.00 3.66
125 126 2.046507 CACAGCCTCCTCCACAGC 60.047 66.667 0.00 0.00 0.00 4.40
126 127 3.325753 ACAGCCTCCTCCACAGCC 61.326 66.667 0.00 0.00 0.00 4.85
127 128 3.324930 CAGCCTCCTCCACAGCCA 61.325 66.667 0.00 0.00 0.00 4.75
128 129 2.530151 AGCCTCCTCCACAGCCAA 60.530 61.111 0.00 0.00 0.00 4.52
129 130 1.927527 AGCCTCCTCCACAGCCAAT 60.928 57.895 0.00 0.00 0.00 3.16
130 131 1.452833 GCCTCCTCCACAGCCAATC 60.453 63.158 0.00 0.00 0.00 2.67
131 132 1.225704 CCTCCTCCACAGCCAATCC 59.774 63.158 0.00 0.00 0.00 3.01
132 133 1.153289 CTCCTCCACAGCCAATCCG 60.153 63.158 0.00 0.00 0.00 4.18
133 134 1.612146 TCCTCCACAGCCAATCCGA 60.612 57.895 0.00 0.00 0.00 4.55
134 135 1.450312 CCTCCACAGCCAATCCGAC 60.450 63.158 0.00 0.00 0.00 4.79
135 136 1.811266 CTCCACAGCCAATCCGACG 60.811 63.158 0.00 0.00 0.00 5.12
136 137 3.499737 CCACAGCCAATCCGACGC 61.500 66.667 0.00 0.00 0.00 5.19
137 138 2.434884 CACAGCCAATCCGACGCT 60.435 61.111 0.00 0.00 0.00 5.07
138 139 1.153647 CACAGCCAATCCGACGCTA 60.154 57.895 0.00 0.00 0.00 4.26
139 140 1.141881 ACAGCCAATCCGACGCTAG 59.858 57.895 0.00 0.00 0.00 3.42
140 141 1.592669 CAGCCAATCCGACGCTAGG 60.593 63.158 0.00 0.00 0.00 3.02
141 142 2.280186 GCCAATCCGACGCTAGGG 60.280 66.667 5.05 5.05 0.00 3.53
142 143 3.090219 GCCAATCCGACGCTAGGGT 62.090 63.158 12.95 12.95 0.00 4.34
143 144 1.520666 CCAATCCGACGCTAGGGTT 59.479 57.895 14.33 0.00 30.98 4.11
144 145 0.529992 CCAATCCGACGCTAGGGTTC 60.530 60.000 14.33 6.60 27.65 3.62
145 146 0.460311 CAATCCGACGCTAGGGTTCT 59.540 55.000 14.33 0.00 27.65 3.01
146 147 0.460311 AATCCGACGCTAGGGTTCTG 59.540 55.000 14.33 7.26 0.00 3.02
147 148 2.017559 ATCCGACGCTAGGGTTCTGC 62.018 60.000 14.33 0.08 0.00 4.26
148 149 2.202756 CGACGCTAGGGTTCTGCC 60.203 66.667 14.33 0.00 0.00 4.85
149 150 2.202756 GACGCTAGGGTTCTGCCG 60.203 66.667 14.33 0.00 38.44 5.69
150 151 2.678934 ACGCTAGGGTTCTGCCGA 60.679 61.111 6.62 0.00 38.44 5.54
151 152 2.202756 CGCTAGGGTTCTGCCGAC 60.203 66.667 0.00 0.00 38.44 4.79
152 153 2.978824 GCTAGGGTTCTGCCGACA 59.021 61.111 0.00 0.00 38.44 4.35
153 154 1.448013 GCTAGGGTTCTGCCGACAC 60.448 63.158 0.00 0.00 38.44 3.67
154 155 1.153823 CTAGGGTTCTGCCGACACG 60.154 63.158 0.00 0.00 38.44 4.49
155 156 1.592400 CTAGGGTTCTGCCGACACGA 61.592 60.000 0.00 0.00 38.44 4.35
156 157 1.592400 TAGGGTTCTGCCGACACGAG 61.592 60.000 0.00 0.00 38.44 4.18
157 158 3.112709 GGTTCTGCCGACACGAGC 61.113 66.667 0.00 0.00 0.00 5.03
158 159 3.112709 GTTCTGCCGACACGAGCC 61.113 66.667 0.00 0.00 0.00 4.70
159 160 4.717629 TTCTGCCGACACGAGCCG 62.718 66.667 0.00 0.00 0.00 5.52
182 183 4.148825 GCCGCGGTCACCAGAGAT 62.149 66.667 28.70 0.00 0.00 2.75
183 184 2.202797 CCGCGGTCACCAGAGATG 60.203 66.667 19.50 0.00 0.00 2.90
184 185 2.202797 CGCGGTCACCAGAGATGG 60.203 66.667 0.00 0.00 0.00 3.51
185 186 2.710902 CGCGGTCACCAGAGATGGA 61.711 63.158 0.00 0.00 0.00 3.41
186 187 1.153549 GCGGTCACCAGAGATGGAC 60.154 63.158 0.31 0.00 0.00 4.02
187 188 1.139734 CGGTCACCAGAGATGGACG 59.860 63.158 0.31 0.00 0.00 4.79
188 189 1.153549 GGTCACCAGAGATGGACGC 60.154 63.158 0.31 0.00 0.00 5.19
189 190 1.153549 GTCACCAGAGATGGACGCC 60.154 63.158 0.31 0.00 0.00 5.68
190 191 2.202797 CACCAGAGATGGACGCCG 60.203 66.667 0.31 0.00 0.00 6.46
191 192 4.148825 ACCAGAGATGGACGCCGC 62.149 66.667 0.31 0.00 0.00 6.53
195 196 4.933064 GAGATGGACGCCGCGGAG 62.933 72.222 33.48 30.61 0.00 4.63
197 198 4.286320 GATGGACGCCGCGGAGAT 62.286 66.667 35.95 18.68 0.00 2.75
198 199 3.792053 GATGGACGCCGCGGAGATT 62.792 63.158 35.95 14.60 0.00 2.40
199 200 4.812476 TGGACGCCGCGGAGATTG 62.812 66.667 35.95 17.18 0.00 2.67
207 208 3.929948 GCGGAGATTGCGGCGAAG 61.930 66.667 12.98 0.00 0.00 3.79
208 209 3.264897 CGGAGATTGCGGCGAAGG 61.265 66.667 12.98 0.00 0.00 3.46
209 210 2.125106 GGAGATTGCGGCGAAGGT 60.125 61.111 12.98 0.00 0.00 3.50
210 211 2.174319 GGAGATTGCGGCGAAGGTC 61.174 63.158 12.98 2.06 0.00 3.85
211 212 1.153549 GAGATTGCGGCGAAGGTCT 60.154 57.895 12.98 7.97 0.00 3.85
212 213 1.424493 GAGATTGCGGCGAAGGTCTG 61.424 60.000 12.98 0.00 0.00 3.51
213 214 3.100862 GATTGCGGCGAAGGTCTGC 62.101 63.158 12.98 0.00 36.41 4.26
221 222 3.760035 GAAGGTCTGCGCCCTCGA 61.760 66.667 4.18 0.00 38.10 4.04
222 223 3.708220 GAAGGTCTGCGCCCTCGAG 62.708 68.421 4.18 5.13 38.10 4.04
253 254 3.801997 CCAAGGCCTCCCGCATCT 61.802 66.667 5.23 0.00 40.31 2.90
254 255 2.203126 CAAGGCCTCCCGCATCTC 60.203 66.667 5.23 0.00 40.31 2.75
255 256 2.366167 AAGGCCTCCCGCATCTCT 60.366 61.111 5.23 0.00 40.31 3.10
256 257 2.739996 AAGGCCTCCCGCATCTCTG 61.740 63.158 5.23 0.00 40.31 3.35
257 258 4.247380 GGCCTCCCGCATCTCTGG 62.247 72.222 0.00 0.00 40.31 3.86
258 259 4.925861 GCCTCCCGCATCTCTGGC 62.926 72.222 0.00 0.00 37.47 4.85
259 260 4.247380 CCTCCCGCATCTCTGGCC 62.247 72.222 0.00 0.00 0.00 5.36
260 261 3.160047 CTCCCGCATCTCTGGCCT 61.160 66.667 3.32 0.00 0.00 5.19
261 262 3.457625 CTCCCGCATCTCTGGCCTG 62.458 68.421 3.32 2.92 0.00 4.85
262 263 4.559063 CCCGCATCTCTGGCCTGG 62.559 72.222 10.07 0.00 0.00 4.45
263 264 3.473647 CCGCATCTCTGGCCTGGA 61.474 66.667 10.07 6.53 0.00 3.86
264 265 2.108566 CGCATCTCTGGCCTGGAG 59.891 66.667 16.65 16.65 0.00 3.86
265 266 2.509916 GCATCTCTGGCCTGGAGG 59.490 66.667 20.54 14.35 38.53 4.30
275 276 4.286447 CCTGGAGGCTAGGGTCTC 57.714 66.667 0.00 0.00 42.96 3.36
287 288 1.518302 GGGTCTCCCTTCTCGAAGC 59.482 63.158 1.13 0.00 41.34 3.86
288 289 1.518302 GGTCTCCCTTCTCGAAGCC 59.482 63.158 1.13 0.00 37.11 4.35
289 290 1.139947 GTCTCCCTTCTCGAAGCCG 59.860 63.158 1.13 0.00 37.11 5.52
290 291 1.001269 TCTCCCTTCTCGAAGCCGA 60.001 57.895 1.13 0.00 43.35 5.54
298 299 2.430244 TCGAAGCCGAGAACACGC 60.430 61.111 0.00 0.00 40.30 5.34
299 300 3.827784 CGAAGCCGAGAACACGCG 61.828 66.667 3.53 3.53 38.22 6.01
300 301 4.135493 GAAGCCGAGAACACGCGC 62.135 66.667 5.73 0.00 0.00 6.86
301 302 4.664677 AAGCCGAGAACACGCGCT 62.665 61.111 5.73 0.00 39.78 5.92
302 303 4.664677 AGCCGAGAACACGCGCTT 62.665 61.111 5.73 0.00 36.82 4.68
303 304 4.135493 GCCGAGAACACGCGCTTC 62.135 66.667 5.73 7.61 0.00 3.86
304 305 2.733218 CCGAGAACACGCGCTTCA 60.733 61.111 5.73 0.00 0.00 3.02
305 306 2.720758 CCGAGAACACGCGCTTCAG 61.721 63.158 5.73 5.89 0.00 3.02
306 307 2.720758 CGAGAACACGCGCTTCAGG 61.721 63.158 5.73 0.00 0.00 3.86
307 308 1.372997 GAGAACACGCGCTTCAGGA 60.373 57.895 5.73 0.00 0.00 3.86
308 309 0.944311 GAGAACACGCGCTTCAGGAA 60.944 55.000 5.73 0.00 0.00 3.36
309 310 0.946221 AGAACACGCGCTTCAGGAAG 60.946 55.000 5.73 4.67 41.24 3.46
310 311 1.901650 GAACACGCGCTTCAGGAAGG 61.902 60.000 5.73 2.87 38.80 3.46
311 312 3.793144 CACGCGCTTCAGGAAGGC 61.793 66.667 5.73 10.64 38.80 4.35
315 316 3.121030 CGCTTCAGGAAGGCCGTG 61.121 66.667 10.77 0.00 38.80 4.94
316 317 3.435186 GCTTCAGGAAGGCCGTGC 61.435 66.667 0.86 0.86 38.80 5.34
326 327 2.360600 GGCCGTGCCCAATGTACA 60.361 61.111 0.00 0.00 44.06 2.90
327 328 2.406616 GGCCGTGCCCAATGTACAG 61.407 63.158 0.33 0.00 44.06 2.74
328 329 1.674322 GCCGTGCCCAATGTACAGT 60.674 57.895 0.33 0.00 0.00 3.55
329 330 1.644786 GCCGTGCCCAATGTACAGTC 61.645 60.000 0.33 0.00 0.00 3.51
330 331 0.321210 CCGTGCCCAATGTACAGTCA 60.321 55.000 0.33 0.00 0.00 3.41
331 332 1.518325 CGTGCCCAATGTACAGTCAA 58.482 50.000 0.33 0.00 0.00 3.18
332 333 2.083774 CGTGCCCAATGTACAGTCAAT 58.916 47.619 0.33 0.00 0.00 2.57
333 334 2.159531 CGTGCCCAATGTACAGTCAATG 60.160 50.000 0.33 0.00 0.00 2.82
334 335 2.164219 GTGCCCAATGTACAGTCAATGG 59.836 50.000 0.33 4.76 37.92 3.16
338 339 3.684908 CCAATGTACAGTCAATGGGTCA 58.315 45.455 0.33 0.00 35.45 4.02
339 340 4.272489 CCAATGTACAGTCAATGGGTCAT 58.728 43.478 0.33 0.00 35.45 3.06
340 341 4.706476 CCAATGTACAGTCAATGGGTCATT 59.294 41.667 0.33 0.00 35.45 2.57
341 342 5.163622 CCAATGTACAGTCAATGGGTCATTC 60.164 44.000 0.33 0.00 35.45 2.67
342 343 4.632327 TGTACAGTCAATGGGTCATTCA 57.368 40.909 0.00 0.00 31.05 2.57
343 344 4.578871 TGTACAGTCAATGGGTCATTCAG 58.421 43.478 0.00 0.00 31.05 3.02
344 345 3.077484 ACAGTCAATGGGTCATTCAGG 57.923 47.619 0.00 0.00 31.05 3.86
345 346 1.747355 CAGTCAATGGGTCATTCAGGC 59.253 52.381 0.00 0.00 31.05 4.85
346 347 1.355381 AGTCAATGGGTCATTCAGGCA 59.645 47.619 0.00 0.00 31.05 4.75
347 348 2.170166 GTCAATGGGTCATTCAGGCAA 58.830 47.619 0.00 0.00 31.05 4.52
348 349 2.094545 GTCAATGGGTCATTCAGGCAAC 60.095 50.000 0.00 0.00 31.05 4.17
349 350 1.205417 CAATGGGTCATTCAGGCAACC 59.795 52.381 0.00 0.00 31.05 3.77
350 351 0.409092 ATGGGTCATTCAGGCAACCA 59.591 50.000 0.00 0.00 33.27 3.67
351 352 0.251297 TGGGTCATTCAGGCAACCAG 60.251 55.000 0.00 0.00 33.27 4.00
352 353 0.967380 GGGTCATTCAGGCAACCAGG 60.967 60.000 0.00 0.00 33.27 4.45
353 354 0.967380 GGTCATTCAGGCAACCAGGG 60.967 60.000 0.00 0.00 37.17 4.45
354 355 1.304381 TCATTCAGGCAACCAGGGC 60.304 57.895 0.00 0.00 37.17 5.19
361 362 4.621087 GCAACCAGGGCCCAACCT 62.621 66.667 27.56 0.00 43.08 3.50
362 363 2.201210 CAACCAGGGCCCAACCTT 59.799 61.111 27.56 6.35 39.34 3.50
363 364 1.908299 CAACCAGGGCCCAACCTTC 60.908 63.158 27.56 0.00 39.34 3.46
364 365 3.507377 AACCAGGGCCCAACCTTCG 62.507 63.158 27.56 4.82 39.34 3.79
365 366 4.740822 CCAGGGCCCAACCTTCGG 62.741 72.222 27.56 8.37 39.34 4.30
366 367 3.966543 CAGGGCCCAACCTTCGGT 61.967 66.667 27.56 0.00 39.34 4.69
367 368 3.647771 AGGGCCCAACCTTCGGTC 61.648 66.667 27.56 0.00 37.69 4.79
369 370 4.011517 GGCCCAACCTTCGGTCGA 62.012 66.667 0.00 0.00 33.12 4.20
370 371 2.267961 GCCCAACCTTCGGTCGAT 59.732 61.111 0.00 0.00 33.12 3.59
371 372 1.376812 GCCCAACCTTCGGTCGATT 60.377 57.895 0.00 0.00 33.12 3.34
372 373 1.644786 GCCCAACCTTCGGTCGATTG 61.645 60.000 0.00 0.00 33.12 2.67
373 374 1.024579 CCCAACCTTCGGTCGATTGG 61.025 60.000 14.00 14.00 33.12 3.16
374 375 0.036765 CCAACCTTCGGTCGATTGGA 60.037 55.000 15.23 0.00 33.10 3.53
375 376 1.076332 CAACCTTCGGTCGATTGGAC 58.924 55.000 15.82 0.00 45.31 4.02
383 384 3.527434 GTCGATTGGACGAGGGTTT 57.473 52.632 0.00 0.00 42.88 3.27
384 385 1.356938 GTCGATTGGACGAGGGTTTC 58.643 55.000 0.00 0.00 42.88 2.78
392 393 2.183300 CGAGGGTTTCGGCGATGA 59.817 61.111 11.76 0.00 45.54 2.92
393 394 1.878522 CGAGGGTTTCGGCGATGAG 60.879 63.158 11.76 0.00 45.54 2.90
394 395 1.521681 GAGGGTTTCGGCGATGAGG 60.522 63.158 11.76 0.00 0.00 3.86
395 396 1.956629 GAGGGTTTCGGCGATGAGGA 61.957 60.000 11.76 0.00 0.00 3.71
396 397 1.814169 GGGTTTCGGCGATGAGGAC 60.814 63.158 11.76 4.93 0.00 3.85
397 398 2.165301 GGTTTCGGCGATGAGGACG 61.165 63.158 11.76 0.00 40.65 4.79
398 399 1.445582 GTTTCGGCGATGAGGACGT 60.446 57.895 11.76 0.00 40.06 4.34
399 400 1.153901 TTTCGGCGATGAGGACGTC 60.154 57.895 11.76 7.13 40.06 4.34
405 406 2.408022 GATGAGGACGTCGACCGG 59.592 66.667 10.58 0.00 42.24 5.28
406 407 2.360852 ATGAGGACGTCGACCGGT 60.361 61.111 6.92 6.92 42.24 5.28
407 408 2.594119 GATGAGGACGTCGACCGGTG 62.594 65.000 14.63 4.45 42.24 4.94
408 409 3.052082 GAGGACGTCGACCGGTGA 61.052 66.667 14.63 7.32 42.24 4.02
409 410 2.360852 AGGACGTCGACCGGTGAT 60.361 61.111 14.63 0.00 42.24 3.06
410 411 2.101770 GGACGTCGACCGGTGATC 59.898 66.667 14.63 5.50 42.24 2.92
411 412 2.277120 GACGTCGACCGGTGATCG 60.277 66.667 14.63 15.97 42.24 3.69
412 413 3.031964 GACGTCGACCGGTGATCGT 62.032 63.158 14.63 19.34 42.24 3.73
413 414 2.177531 CGTCGACCGGTGATCGTT 59.822 61.111 14.63 0.00 40.50 3.85
414 415 2.150218 CGTCGACCGGTGATCGTTG 61.150 63.158 14.63 2.81 40.50 4.10
415 416 1.804326 GTCGACCGGTGATCGTTGG 60.804 63.158 14.63 0.00 40.50 3.77
416 417 3.186047 CGACCGGTGATCGTTGGC 61.186 66.667 14.63 0.00 37.11 4.52
417 418 3.186047 GACCGGTGATCGTTGGCG 61.186 66.667 14.63 0.00 37.11 5.69
440 441 2.804090 GGCGACGAGGACAACGAC 60.804 66.667 0.00 0.00 34.70 4.34
441 442 2.804090 GCGACGAGGACAACGACC 60.804 66.667 0.00 0.00 34.70 4.79
442 443 2.501222 CGACGAGGACAACGACCG 60.501 66.667 0.00 0.00 34.70 4.79
443 444 2.126580 GACGAGGACAACGACCGG 60.127 66.667 0.00 0.00 34.70 5.28
444 445 3.621892 GACGAGGACAACGACCGGG 62.622 68.421 6.32 0.00 34.70 5.73
445 446 4.430765 CGAGGACAACGACCGGGG 62.431 72.222 6.32 0.00 0.00 5.73
446 447 3.308705 GAGGACAACGACCGGGGT 61.309 66.667 6.32 0.00 0.00 4.95
447 448 1.978617 GAGGACAACGACCGGGGTA 60.979 63.158 6.32 0.00 0.00 3.69
448 449 1.941999 GAGGACAACGACCGGGGTAG 61.942 65.000 6.32 0.00 0.00 3.18
449 450 1.978617 GGACAACGACCGGGGTAGA 60.979 63.158 6.32 0.00 0.00 2.59
450 451 1.509923 GACAACGACCGGGGTAGAG 59.490 63.158 6.32 0.10 0.00 2.43
451 452 1.941999 GACAACGACCGGGGTAGAGG 61.942 65.000 6.32 0.00 0.00 3.69
452 453 1.679977 CAACGACCGGGGTAGAGGA 60.680 63.158 6.32 0.00 0.00 3.71
453 454 1.680314 AACGACCGGGGTAGAGGAC 60.680 63.158 6.32 0.00 0.00 3.85
454 455 3.207669 CGACCGGGGTAGAGGACG 61.208 72.222 6.32 0.00 38.99 4.79
457 458 3.145551 CCGGGGTAGAGGACGGTG 61.146 72.222 0.00 0.00 41.34 4.94
458 459 3.834799 CGGGGTAGAGGACGGTGC 61.835 72.222 0.00 0.00 0.00 5.01
459 460 2.363925 GGGGTAGAGGACGGTGCT 60.364 66.667 0.31 0.31 0.00 4.40
460 461 2.722201 GGGGTAGAGGACGGTGCTG 61.722 68.421 6.97 0.00 0.00 4.41
461 462 2.184579 GGTAGAGGACGGTGCTGC 59.815 66.667 6.97 0.00 0.00 5.25
462 463 2.646175 GGTAGAGGACGGTGCTGCA 61.646 63.158 6.97 0.00 0.00 4.41
463 464 1.153745 GTAGAGGACGGTGCTGCAG 60.154 63.158 10.11 10.11 0.00 4.41
464 465 2.351244 TAGAGGACGGTGCTGCAGG 61.351 63.158 17.12 0.02 0.00 4.85
465 466 4.767255 GAGGACGGTGCTGCAGGG 62.767 72.222 17.12 0.00 0.00 4.45
467 468 4.101448 GGACGGTGCTGCAGGGAT 62.101 66.667 17.12 0.00 0.00 3.85
468 469 2.821366 GACGGTGCTGCAGGGATG 60.821 66.667 17.12 0.00 0.00 3.51
469 470 3.315142 GACGGTGCTGCAGGGATGA 62.315 63.158 17.12 0.00 0.00 2.92
470 471 2.046023 CGGTGCTGCAGGGATGAA 60.046 61.111 17.12 0.00 0.00 2.57
471 472 2.110967 CGGTGCTGCAGGGATGAAG 61.111 63.158 17.12 0.00 0.00 3.02
472 473 1.751927 GGTGCTGCAGGGATGAAGG 60.752 63.158 17.12 0.00 0.00 3.46
473 474 1.300963 GTGCTGCAGGGATGAAGGA 59.699 57.895 17.12 0.00 0.00 3.36
474 475 1.028868 GTGCTGCAGGGATGAAGGAC 61.029 60.000 17.12 0.00 0.00 3.85
475 476 1.817099 GCTGCAGGGATGAAGGACG 60.817 63.158 17.12 0.00 0.00 4.79
476 477 1.599047 CTGCAGGGATGAAGGACGT 59.401 57.895 5.57 0.00 0.00 4.34
477 478 0.036010 CTGCAGGGATGAAGGACGTT 60.036 55.000 5.57 0.00 0.00 3.99
478 479 0.321564 TGCAGGGATGAAGGACGTTG 60.322 55.000 0.00 0.00 0.00 4.10
479 480 0.321653 GCAGGGATGAAGGACGTTGT 60.322 55.000 0.00 0.00 0.00 3.32
480 481 1.882352 GCAGGGATGAAGGACGTTGTT 60.882 52.381 0.00 0.00 0.00 2.83
481 482 1.806542 CAGGGATGAAGGACGTTGTTG 59.193 52.381 0.00 0.00 0.00 3.33
482 483 0.521735 GGGATGAAGGACGTTGTTGC 59.478 55.000 0.00 0.00 0.00 4.17
483 484 0.521735 GGATGAAGGACGTTGTTGCC 59.478 55.000 0.00 0.00 0.00 4.52
484 485 0.165944 GATGAAGGACGTTGTTGCCG 59.834 55.000 0.00 0.00 0.00 5.69
485 486 0.534203 ATGAAGGACGTTGTTGCCGT 60.534 50.000 0.00 0.00 42.06 5.68
486 487 0.745128 TGAAGGACGTTGTTGCCGTT 60.745 50.000 0.00 0.00 38.92 4.44
487 488 0.041576 GAAGGACGTTGTTGCCGTTC 60.042 55.000 0.00 0.00 38.92 3.95
488 489 1.768112 AAGGACGTTGTTGCCGTTCG 61.768 55.000 0.00 0.00 38.84 3.95
489 490 2.527867 GGACGTTGTTGCCGTTCGT 61.528 57.895 0.00 0.00 38.92 3.85
490 491 1.367195 GACGTTGTTGCCGTTCGTG 60.367 57.895 0.00 0.00 38.92 4.35
491 492 2.720750 CGTTGTTGCCGTTCGTGC 60.721 61.111 0.00 0.00 0.00 5.34
492 493 2.720750 GTTGTTGCCGTTCGTGCG 60.721 61.111 0.00 0.00 0.00 5.34
493 494 4.599434 TTGTTGCCGTTCGTGCGC 62.599 61.111 0.00 0.00 0.00 6.09
511 512 3.444737 GCGAGGAAGGAGGCGATA 58.555 61.111 0.00 0.00 0.00 2.92
512 513 1.287503 GCGAGGAAGGAGGCGATAG 59.712 63.158 0.00 0.00 0.00 2.08
513 514 1.173444 GCGAGGAAGGAGGCGATAGA 61.173 60.000 0.00 0.00 39.76 1.98
514 515 1.319541 CGAGGAAGGAGGCGATAGAA 58.680 55.000 0.00 0.00 39.76 2.10
515 516 1.268352 CGAGGAAGGAGGCGATAGAAG 59.732 57.143 0.00 0.00 39.76 2.85
516 517 1.616374 GAGGAAGGAGGCGATAGAAGG 59.384 57.143 0.00 0.00 39.76 3.46
517 518 0.682292 GGAAGGAGGCGATAGAAGGG 59.318 60.000 0.00 0.00 39.76 3.95
518 519 1.415200 GAAGGAGGCGATAGAAGGGT 58.585 55.000 0.00 0.00 39.76 4.34
519 520 1.069358 GAAGGAGGCGATAGAAGGGTG 59.931 57.143 0.00 0.00 39.76 4.61
520 521 0.032017 AGGAGGCGATAGAAGGGTGT 60.032 55.000 0.00 0.00 39.76 4.16
521 522 0.105039 GGAGGCGATAGAAGGGTGTG 59.895 60.000 0.00 0.00 39.76 3.82
522 523 1.112113 GAGGCGATAGAAGGGTGTGA 58.888 55.000 0.00 0.00 39.76 3.58
523 524 1.689273 GAGGCGATAGAAGGGTGTGAT 59.311 52.381 0.00 0.00 39.76 3.06
524 525 2.891580 GAGGCGATAGAAGGGTGTGATA 59.108 50.000 0.00 0.00 39.76 2.15
525 526 3.511477 AGGCGATAGAAGGGTGTGATAT 58.489 45.455 0.00 0.00 39.76 1.63
526 527 4.673968 AGGCGATAGAAGGGTGTGATATA 58.326 43.478 0.00 0.00 39.76 0.86
527 528 5.084519 AGGCGATAGAAGGGTGTGATATAA 58.915 41.667 0.00 0.00 39.76 0.98
528 529 5.047235 AGGCGATAGAAGGGTGTGATATAAC 60.047 44.000 0.00 0.00 39.76 1.89
529 530 4.857588 GCGATAGAAGGGTGTGATATAACG 59.142 45.833 0.00 0.00 39.76 3.18
530 531 5.399858 CGATAGAAGGGTGTGATATAACGG 58.600 45.833 0.00 0.00 39.76 4.44
531 532 3.470645 AGAAGGGTGTGATATAACGGC 57.529 47.619 0.00 0.00 0.00 5.68
532 533 2.104281 AGAAGGGTGTGATATAACGGCC 59.896 50.000 0.00 0.00 0.00 6.13
533 534 0.763035 AGGGTGTGATATAACGGCCC 59.237 55.000 12.59 12.59 37.84 5.80
534 535 0.763035 GGGTGTGATATAACGGCCCT 59.237 55.000 13.03 0.00 35.90 5.19
535 536 1.972795 GGGTGTGATATAACGGCCCTA 59.027 52.381 13.03 0.00 35.90 3.53
536 537 2.028385 GGGTGTGATATAACGGCCCTAG 60.028 54.545 13.03 0.00 35.90 3.02
537 538 2.631545 GGTGTGATATAACGGCCCTAGT 59.368 50.000 0.00 0.00 0.00 2.57
538 539 3.305881 GGTGTGATATAACGGCCCTAGTC 60.306 52.174 0.00 0.00 0.00 2.59
539 540 3.319972 GTGTGATATAACGGCCCTAGTCA 59.680 47.826 0.00 0.00 0.00 3.41
540 541 3.962063 TGTGATATAACGGCCCTAGTCAA 59.038 43.478 0.00 0.00 0.00 3.18
541 542 4.406326 TGTGATATAACGGCCCTAGTCAAA 59.594 41.667 0.00 0.00 0.00 2.69
542 543 4.748600 GTGATATAACGGCCCTAGTCAAAC 59.251 45.833 0.00 0.00 0.00 2.93
543 544 2.304751 ATAACGGCCCTAGTCAAACG 57.695 50.000 0.00 0.00 0.00 3.60
544 545 0.247185 TAACGGCCCTAGTCAAACGG 59.753 55.000 0.00 0.00 0.00 4.44
545 546 1.474332 AACGGCCCTAGTCAAACGGA 61.474 55.000 0.00 0.00 0.00 4.69
546 547 1.262640 ACGGCCCTAGTCAAACGGAT 61.263 55.000 0.00 0.00 0.00 4.18
547 548 0.529992 CGGCCCTAGTCAAACGGATC 60.530 60.000 0.00 0.00 0.00 3.36
548 549 0.831307 GGCCCTAGTCAAACGGATCT 59.169 55.000 0.00 0.00 0.00 2.75
549 550 1.473434 GGCCCTAGTCAAACGGATCTG 60.473 57.143 0.00 0.00 0.00 2.90
550 551 1.480954 GCCCTAGTCAAACGGATCTGA 59.519 52.381 9.00 0.00 0.00 3.27
551 552 2.103263 GCCCTAGTCAAACGGATCTGAT 59.897 50.000 9.00 0.00 0.00 2.90
552 553 3.722147 CCCTAGTCAAACGGATCTGATG 58.278 50.000 9.00 7.13 0.00 3.07
553 554 3.126831 CCTAGTCAAACGGATCTGATGC 58.873 50.000 9.00 0.00 0.00 3.91
554 555 3.181471 CCTAGTCAAACGGATCTGATGCT 60.181 47.826 9.00 10.28 0.00 3.79
555 556 2.898705 AGTCAAACGGATCTGATGCTC 58.101 47.619 9.00 4.32 0.00 4.26
556 557 1.590238 GTCAAACGGATCTGATGCTCG 59.410 52.381 9.00 5.54 0.00 5.03
557 558 0.933097 CAAACGGATCTGATGCTCGG 59.067 55.000 9.00 0.00 0.00 4.63
558 559 0.811616 AAACGGATCTGATGCTCGGC 60.812 55.000 9.00 0.00 0.00 5.54
559 560 1.960040 AACGGATCTGATGCTCGGCA 61.960 55.000 9.00 1.01 44.86 5.69
560 561 1.664017 CGGATCTGATGCTCGGCAG 60.664 63.158 7.57 0.00 43.65 4.85
561 562 1.301558 GGATCTGATGCTCGGCAGG 60.302 63.158 1.51 0.00 43.65 4.85
562 563 1.960250 GATCTGATGCTCGGCAGGC 60.960 63.158 0.00 0.95 43.65 4.85
563 564 3.472943 ATCTGATGCTCGGCAGGCC 62.473 63.158 0.00 0.00 43.65 5.19
583 584 2.750237 GGCCGAACATCGCCCTTT 60.750 61.111 0.00 0.00 34.15 3.11
584 585 2.340328 GGCCGAACATCGCCCTTTT 61.340 57.895 0.00 0.00 34.15 2.27
585 586 1.584495 GCCGAACATCGCCCTTTTT 59.416 52.632 0.00 0.00 38.82 1.94
586 587 0.806241 GCCGAACATCGCCCTTTTTA 59.194 50.000 0.00 0.00 38.82 1.52
641 642 6.627395 TGTGAACGTTTTATGACAATCCTT 57.373 33.333 0.46 0.00 0.00 3.36
643 644 8.155821 TGTGAACGTTTTATGACAATCCTTTA 57.844 30.769 0.46 0.00 0.00 1.85
644 645 8.071368 TGTGAACGTTTTATGACAATCCTTTAC 58.929 33.333 0.46 0.00 0.00 2.01
646 647 6.505044 ACGTTTTATGACAATCCTTTACCC 57.495 37.500 0.00 0.00 0.00 3.69
647 648 6.243148 ACGTTTTATGACAATCCTTTACCCT 58.757 36.000 0.00 0.00 0.00 4.34
648 649 7.396418 ACGTTTTATGACAATCCTTTACCCTA 58.604 34.615 0.00 0.00 0.00 3.53
649 650 7.551617 ACGTTTTATGACAATCCTTTACCCTAG 59.448 37.037 0.00 0.00 0.00 3.02
681 682 2.852413 CAGAGCGAATCACGTAACGAAT 59.148 45.455 0.00 0.00 44.60 3.34
733 740 0.652592 CGAGATTCCGCGCAAATCTT 59.347 50.000 26.62 15.68 42.17 2.40
744 751 3.181517 CGCGCAAATCTTCTCATTTCTCA 60.182 43.478 8.75 0.00 0.00 3.27
762 769 1.536662 AGAGACCCCTCCCACACAC 60.537 63.158 0.00 0.00 40.30 3.82
763 770 1.841556 GAGACCCCTCCCACACACA 60.842 63.158 0.00 0.00 33.30 3.72
764 771 1.385347 AGACCCCTCCCACACACAA 60.385 57.895 0.00 0.00 0.00 3.33
934 946 1.039785 CCGCATCTCTGACCTGGAGA 61.040 60.000 0.00 0.00 42.89 3.71
1015 1027 3.284617 CAGTCAATGGATCATTCAGGCA 58.715 45.455 0.00 0.00 31.05 4.75
1080 1092 1.402787 ACAAGCAAAACTCAGTGGGG 58.597 50.000 0.00 0.00 0.00 4.96
1275 1287 2.306805 TGCTGATGTGGGTCTTGAAGAT 59.693 45.455 0.00 0.00 0.00 2.40
1278 1290 3.937706 CTGATGTGGGTCTTGAAGATGAC 59.062 47.826 0.00 0.00 0.00 3.06
1495 1507 1.347378 TGCCATGTGTAGCTGAGACAA 59.653 47.619 0.00 0.00 34.49 3.18
1528 1543 0.312416 GGACGAGGACGAGGATGATG 59.688 60.000 0.00 0.00 42.66 3.07
1532 1547 1.269309 CGAGGACGAGGATGATGGAAC 60.269 57.143 0.00 0.00 42.66 3.62
1534 1549 1.123928 GGACGAGGATGATGGAACCT 58.876 55.000 0.00 0.00 36.68 3.50
1535 1550 1.202580 GGACGAGGATGATGGAACCTG 60.203 57.143 0.00 0.00 33.89 4.00
1541 1556 2.512896 AGGATGATGGAACCTGCATTCT 59.487 45.455 0.36 0.00 32.39 2.40
1549 1564 2.352127 GGAACCTGCATTCTTGAAGTGC 60.352 50.000 1.27 1.27 39.26 4.40
1553 1568 2.094854 CCTGCATTCTTGAAGTGCTTCC 60.095 50.000 8.87 0.00 39.52 3.46
1585 1600 3.631346 GGACAAGAGGGGGAGTAGAGATT 60.631 52.174 0.00 0.00 0.00 2.40
1753 1768 6.727824 ACTATAAAGATGTTATGGATGCGC 57.272 37.500 0.00 0.00 0.00 6.09
1794 1809 2.514726 ATGGTAAGGGCTGGGACTAT 57.485 50.000 0.00 0.00 0.00 2.12
1902 1917 4.423625 AGAACAGTCAGTTAAAGCCAGT 57.576 40.909 0.00 0.00 41.51 4.00
1928 1943 5.954752 TGGTGCATAATGGACAAGGATTTAA 59.045 36.000 0.00 0.00 40.73 1.52
1951 1966 4.413520 ACCAGATGGATGCTGTTAGGTATT 59.586 41.667 5.72 0.00 38.94 1.89
1954 1969 3.857157 TGGATGCTGTTAGGTATTCCC 57.143 47.619 0.00 0.00 0.00 3.97
1956 1971 3.391296 TGGATGCTGTTAGGTATTCCCTC 59.609 47.826 0.00 0.00 44.81 4.30
1957 1972 3.391296 GGATGCTGTTAGGTATTCCCTCA 59.609 47.826 0.00 0.00 44.81 3.86
1958 1973 4.503991 GGATGCTGTTAGGTATTCCCTCAG 60.504 50.000 0.00 0.00 44.81 3.35
1959 1974 3.450904 TGCTGTTAGGTATTCCCTCAGT 58.549 45.455 0.00 0.00 44.81 3.41
1960 1975 4.616553 TGCTGTTAGGTATTCCCTCAGTA 58.383 43.478 0.00 0.00 44.81 2.74
1961 1976 5.216622 TGCTGTTAGGTATTCCCTCAGTAT 58.783 41.667 0.00 0.00 44.81 2.12
1962 1977 6.378745 TGCTGTTAGGTATTCCCTCAGTATA 58.621 40.000 0.00 0.00 44.81 1.47
1963 1978 6.842280 TGCTGTTAGGTATTCCCTCAGTATAA 59.158 38.462 0.00 0.00 44.81 0.98
2013 2028 8.138712 AGTATAAACTGTAACTGATAGCTCTGC 58.861 37.037 0.00 0.00 33.57 4.26
2082 2097 3.367292 CCTCAACATAATTTGTGCCGCTT 60.367 43.478 0.00 0.00 38.99 4.68
2129 2144 2.576615 AGGAGACTTGCCTTGTTTGTC 58.423 47.619 0.00 0.00 37.44 3.18
2209 2225 3.103742 AGAAGAGATTCCCTGAGTGGAC 58.896 50.000 0.00 0.00 38.35 4.02
2257 2273 2.741517 TGTGTTGATCATGCCTTACACG 59.258 45.455 17.05 0.00 38.88 4.49
2393 2409 1.274596 CGTAATCACGTGTACAGGGC 58.725 55.000 16.51 0.00 43.31 5.19
2395 2411 0.458889 TAATCACGTGTACAGGGCGC 60.459 55.000 16.51 0.00 0.00 6.53
2425 2441 2.731968 GCGCTCATTGGTGGTGTATTTG 60.732 50.000 0.00 0.00 0.00 2.32
2473 2490 7.969690 TGGTCATTTGGTGTAATGGATTAAT 57.030 32.000 0.00 0.00 36.41 1.40
2642 2667 7.814264 AAGAGTTTCTGTTTGTCTCATGATT 57.186 32.000 0.00 0.00 0.00 2.57
2710 2735 1.848388 TGGATGGTGATGCTCTTGGAT 59.152 47.619 0.00 0.00 0.00 3.41
2746 2771 6.542852 ACTGTCGATGATTTGGAAAAATACG 58.457 36.000 0.00 0.00 0.00 3.06
2774 2799 3.657015 TGCTCTCAAGTTCTGTCAGAG 57.343 47.619 2.12 0.00 34.79 3.35
2783 2808 3.357203 AGTTCTGTCAGAGGATCGCTAA 58.643 45.455 2.12 0.00 42.67 3.09
2802 2827 4.031878 GCTAAGCGTTACTCTAAACAGCTG 59.968 45.833 13.48 13.48 38.38 4.24
2826 2851 6.992123 TGTTTGCGATATATCAGAACAAGGAT 59.008 34.615 13.11 0.00 0.00 3.24
2855 2880 2.644798 ACTTTCCCTGACTGGTAATGCT 59.355 45.455 0.00 0.00 0.00 3.79
2878 2903 1.093159 CTCCAGATGCTGACCTTTGC 58.907 55.000 0.00 0.00 32.44 3.68
3047 3073 6.900568 TGCATGTTTTTAAGAAAAGTGGTG 57.099 33.333 0.00 0.00 35.53 4.17
3101 3127 2.290514 CCAGTGCCTCTTTTGGAGATGA 60.291 50.000 0.00 0.00 44.45 2.92
3128 3154 1.603802 ACTGCCGATTCACACACAAAG 59.396 47.619 0.00 0.00 0.00 2.77
3141 3167 6.923012 TCACACACAAAGCTGCATATTTATT 58.077 32.000 1.02 0.00 0.00 1.40
3143 3169 8.518702 TCACACACAAAGCTGCATATTTATTTA 58.481 29.630 1.02 0.00 0.00 1.40
3180 3209 6.961359 ACTTTTTAGTGCAAAACAGGAAAC 57.039 33.333 0.00 0.00 35.84 2.78
3188 3217 2.737039 GCAAAACAGGAAACCGAAAGCA 60.737 45.455 0.00 0.00 0.00 3.91
3190 3219 2.863401 AACAGGAAACCGAAAGCAAC 57.137 45.000 0.00 0.00 0.00 4.17
3211 3252 2.030007 CAGCAACAACAATGACCCGAAT 60.030 45.455 0.00 0.00 0.00 3.34
3229 3270 1.376543 ATTGAACTCGCAGGAGCATG 58.623 50.000 0.00 0.00 44.48 4.06
3248 3289 4.733523 GCATGGGTTAGTTTGCTAAATCCG 60.734 45.833 0.00 0.00 38.74 4.18
3266 3307 1.127951 CCGTGTTCACGTTGATTAGCC 59.872 52.381 20.93 0.00 0.00 3.93
3342 3383 1.279271 CCGGAAGACATTGTCCCTTCT 59.721 52.381 13.14 0.00 37.17 2.85
3350 3391 6.187727 AGACATTGTCCCTTCTAGTTTTGA 57.812 37.500 13.14 0.00 32.18 2.69
3364 3405 6.306987 TCTAGTTTTGAAATCTCCAAAGCCT 58.693 36.000 0.00 0.00 36.01 4.58
3377 3418 2.159057 CCAAAGCCTCCAATGGTAATGC 60.159 50.000 0.00 0.00 0.00 3.56
3410 3451 1.680338 GTGGGTGATGCCTGGATTAC 58.320 55.000 0.00 0.00 37.43 1.89
3467 3514 4.678256 TCATGTGTAAGAGTTCTCTCCCT 58.322 43.478 2.69 0.00 41.26 4.20
3473 3520 4.905456 TGTAAGAGTTCTCTCCCTTTGGAA 59.095 41.667 2.69 0.00 41.17 3.53
3501 3548 5.175856 GCTTTAGCATGTGAACCTATACGAG 59.824 44.000 0.00 0.00 41.59 4.18
3553 3603 0.895100 GCAACCACTTGGCATCCTCA 60.895 55.000 0.00 0.00 39.32 3.86
3560 3610 1.912043 ACTTGGCATCCTCAGCTTACT 59.088 47.619 0.00 0.00 0.00 2.24
3565 3615 4.223144 TGGCATCCTCAGCTTACTATACA 58.777 43.478 0.00 0.00 0.00 2.29
3571 3621 8.091449 GCATCCTCAGCTTACTATACATAGTTT 58.909 37.037 7.18 0.00 43.06 2.66
3577 3627 7.926555 TCAGCTTACTATACATAGTTTGAAGGC 59.073 37.037 7.18 2.40 43.06 4.35
3586 3636 4.702131 ACATAGTTTGAAGGCATCACTTCC 59.298 41.667 0.00 0.00 44.85 3.46
3637 3687 5.573337 ACTTAGGAATGCAATTTCTCTGC 57.427 39.130 0.00 0.00 37.76 4.26
3640 3690 2.163010 AGGAATGCAATTTCTCTGCGTG 59.837 45.455 0.00 0.00 37.76 5.34
3687 3737 2.972625 TGGTGATCGCCTACAAAGAAG 58.027 47.619 25.23 0.00 0.00 2.85
3698 3748 1.986882 ACAAAGAAGAGGTTGGCCAG 58.013 50.000 5.11 0.00 37.19 4.85
3701 3751 3.160269 CAAAGAAGAGGTTGGCCAGATT 58.840 45.455 5.11 0.00 37.19 2.40
3732 3782 2.203294 GTTGTGCGGGTGGGAACT 60.203 61.111 0.00 0.00 0.00 3.01
3756 3815 0.680921 ATCACCTCCCACATTTGCCG 60.681 55.000 0.00 0.00 0.00 5.69
3769 3828 5.352016 CCACATTTGCCGATTTTTCATTCAT 59.648 36.000 0.00 0.00 0.00 2.57
3776 3835 5.762218 TGCCGATTTTTCATTCATTTTTGGT 59.238 32.000 0.00 0.00 0.00 3.67
3784 3843 5.822132 TCATTCATTTTTGGTCCATGGTT 57.178 34.783 12.58 0.00 0.00 3.67
3785 3844 5.792741 TCATTCATTTTTGGTCCATGGTTC 58.207 37.500 12.58 6.39 0.00 3.62
3786 3845 3.932545 TCATTTTTGGTCCATGGTTCG 57.067 42.857 12.58 0.00 0.00 3.95
3787 3846 3.491342 TCATTTTTGGTCCATGGTTCGA 58.509 40.909 12.58 2.26 0.00 3.71
3788 3847 3.505680 TCATTTTTGGTCCATGGTTCGAG 59.494 43.478 12.58 0.00 0.00 4.04
3789 3848 2.940994 TTTTGGTCCATGGTTCGAGA 57.059 45.000 12.58 0.00 0.00 4.04
3801 3860 0.953960 GTTCGAGATTGGGTTGGCGT 60.954 55.000 0.00 0.00 0.00 5.68
3820 3879 5.009210 TGGCGTAATTAATTCTATGGTTGGC 59.991 40.000 3.39 0.80 0.00 4.52
3821 3880 5.144359 GCGTAATTAATTCTATGGTTGGCG 58.856 41.667 3.39 0.00 0.00 5.69
3826 3886 6.575162 ATTAATTCTATGGTTGGCGGATTC 57.425 37.500 0.00 0.00 0.00 2.52
3828 3888 3.576078 TTCTATGGTTGGCGGATTCAT 57.424 42.857 0.00 0.00 0.00 2.57
3843 3903 5.977129 GCGGATTCATTTTATGTTAAGGGTG 59.023 40.000 0.00 0.00 0.00 4.61
3844 3904 6.405397 GCGGATTCATTTTATGTTAAGGGTGT 60.405 38.462 0.00 0.00 0.00 4.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 1.396653 CGTACCCCTAGGTCGTCAAT 58.603 55.000 8.29 0.00 46.45 2.57
4 5 2.828128 CGCGTACCCCTAGGTCGTC 61.828 68.421 8.29 3.46 46.45 4.20
5 6 2.825836 CGCGTACCCCTAGGTCGT 60.826 66.667 8.29 6.00 46.45 4.34
6 7 4.261781 GCGCGTACCCCTAGGTCG 62.262 72.222 8.43 8.12 46.45 4.79
7 8 3.142838 TGCGCGTACCCCTAGGTC 61.143 66.667 8.43 0.00 46.45 3.85
9 10 3.454573 TGTGCGCGTACCCCTAGG 61.455 66.667 24.54 0.06 40.04 3.02
10 11 2.202703 GTGTGCGCGTACCCCTAG 60.203 66.667 24.54 0.00 0.00 3.02
11 12 3.762247 GGTGTGCGCGTACCCCTA 61.762 66.667 24.54 2.60 0.00 3.53
15 16 0.102844 TTATAGGGTGTGCGCGTACC 59.897 55.000 24.54 20.91 36.21 3.34
16 17 1.589779 GTTTATAGGGTGTGCGCGTAC 59.410 52.381 21.02 21.02 0.00 3.67
17 18 1.471327 GGTTTATAGGGTGTGCGCGTA 60.471 52.381 8.43 0.00 0.00 4.42
18 19 0.741927 GGTTTATAGGGTGTGCGCGT 60.742 55.000 8.43 0.00 0.00 6.01
19 20 0.741574 TGGTTTATAGGGTGTGCGCG 60.742 55.000 0.00 0.00 0.00 6.86
20 21 1.400494 CTTGGTTTATAGGGTGTGCGC 59.600 52.381 0.00 0.00 0.00 6.09
21 22 2.936498 CTCTTGGTTTATAGGGTGTGCG 59.064 50.000 0.00 0.00 0.00 5.34
22 23 4.081087 TCTCTCTTGGTTTATAGGGTGTGC 60.081 45.833 0.00 0.00 0.00 4.57
23 24 5.395768 CCTCTCTCTTGGTTTATAGGGTGTG 60.396 48.000 0.00 0.00 0.00 3.82
24 25 4.717280 CCTCTCTCTTGGTTTATAGGGTGT 59.283 45.833 0.00 0.00 0.00 4.16
25 26 4.101741 CCCTCTCTCTTGGTTTATAGGGTG 59.898 50.000 0.00 0.00 38.09 4.61
26 27 4.015541 TCCCTCTCTCTTGGTTTATAGGGT 60.016 45.833 0.00 0.00 42.58 4.34
27 28 4.557705 TCCCTCTCTCTTGGTTTATAGGG 58.442 47.826 0.00 0.00 43.23 3.53
28 29 5.212745 ACTCCCTCTCTCTTGGTTTATAGG 58.787 45.833 0.00 0.00 0.00 2.57
29 30 7.507616 ACATACTCCCTCTCTCTTGGTTTATAG 59.492 40.741 0.00 0.00 0.00 1.31
30 31 7.287927 CACATACTCCCTCTCTCTTGGTTTATA 59.712 40.741 0.00 0.00 0.00 0.98
31 32 6.098982 CACATACTCCCTCTCTCTTGGTTTAT 59.901 42.308 0.00 0.00 0.00 1.40
32 33 5.422331 CACATACTCCCTCTCTCTTGGTTTA 59.578 44.000 0.00 0.00 0.00 2.01
33 34 4.223923 CACATACTCCCTCTCTCTTGGTTT 59.776 45.833 0.00 0.00 0.00 3.27
34 35 3.772025 CACATACTCCCTCTCTCTTGGTT 59.228 47.826 0.00 0.00 0.00 3.67
35 36 3.245803 ACACATACTCCCTCTCTCTTGGT 60.246 47.826 0.00 0.00 0.00 3.67
36 37 3.370104 ACACATACTCCCTCTCTCTTGG 58.630 50.000 0.00 0.00 0.00 3.61
37 38 5.413309 AAACACATACTCCCTCTCTCTTG 57.587 43.478 0.00 0.00 0.00 3.02
38 39 5.782845 AGAAAACACATACTCCCTCTCTCTT 59.217 40.000 0.00 0.00 0.00 2.85
39 40 5.186797 CAGAAAACACATACTCCCTCTCTCT 59.813 44.000 0.00 0.00 0.00 3.10
40 41 5.415221 CAGAAAACACATACTCCCTCTCTC 58.585 45.833 0.00 0.00 0.00 3.20
41 42 4.323104 GCAGAAAACACATACTCCCTCTCT 60.323 45.833 0.00 0.00 0.00 3.10
42 43 3.935828 GCAGAAAACACATACTCCCTCTC 59.064 47.826 0.00 0.00 0.00 3.20
43 44 3.307762 GGCAGAAAACACATACTCCCTCT 60.308 47.826 0.00 0.00 0.00 3.69
44 45 3.010420 GGCAGAAAACACATACTCCCTC 58.990 50.000 0.00 0.00 0.00 4.30
45 46 2.644798 AGGCAGAAAACACATACTCCCT 59.355 45.455 0.00 0.00 0.00 4.20
46 47 3.010420 GAGGCAGAAAACACATACTCCC 58.990 50.000 0.00 0.00 0.00 4.30
47 48 3.674997 TGAGGCAGAAAACACATACTCC 58.325 45.455 0.00 0.00 0.00 3.85
48 49 5.886960 AATGAGGCAGAAAACACATACTC 57.113 39.130 0.00 0.00 0.00 2.59
49 50 6.006449 AGAAATGAGGCAGAAAACACATACT 58.994 36.000 0.00 0.00 0.00 2.12
50 51 6.072508 TGAGAAATGAGGCAGAAAACACATAC 60.073 38.462 0.00 0.00 0.00 2.39
51 52 6.003326 TGAGAAATGAGGCAGAAAACACATA 58.997 36.000 0.00 0.00 0.00 2.29
52 53 4.828939 TGAGAAATGAGGCAGAAAACACAT 59.171 37.500 0.00 0.00 0.00 3.21
53 54 4.036734 GTGAGAAATGAGGCAGAAAACACA 59.963 41.667 0.00 0.00 0.00 3.72
54 55 4.036734 TGTGAGAAATGAGGCAGAAAACAC 59.963 41.667 0.00 0.00 0.00 3.32
55 56 4.206375 TGTGAGAAATGAGGCAGAAAACA 58.794 39.130 0.00 0.00 0.00 2.83
56 57 4.516698 TCTGTGAGAAATGAGGCAGAAAAC 59.483 41.667 0.00 0.00 31.14 2.43
57 58 4.516698 GTCTGTGAGAAATGAGGCAGAAAA 59.483 41.667 0.00 0.00 35.20 2.29
58 59 4.067896 GTCTGTGAGAAATGAGGCAGAAA 58.932 43.478 0.00 0.00 35.20 2.52
59 60 3.557898 GGTCTGTGAGAAATGAGGCAGAA 60.558 47.826 0.00 0.00 35.20 3.02
60 61 2.027745 GGTCTGTGAGAAATGAGGCAGA 60.028 50.000 0.00 0.00 0.00 4.26
61 62 2.354259 GGTCTGTGAGAAATGAGGCAG 58.646 52.381 0.00 0.00 0.00 4.85
62 63 1.003580 GGGTCTGTGAGAAATGAGGCA 59.996 52.381 0.00 0.00 0.00 4.75
63 64 1.680249 GGGGTCTGTGAGAAATGAGGC 60.680 57.143 0.00 0.00 0.00 4.70
64 65 1.912043 AGGGGTCTGTGAGAAATGAGG 59.088 52.381 0.00 0.00 0.00 3.86
65 66 2.093235 GGAGGGGTCTGTGAGAAATGAG 60.093 54.545 0.00 0.00 0.00 2.90
66 67 1.909302 GGAGGGGTCTGTGAGAAATGA 59.091 52.381 0.00 0.00 0.00 2.57
67 68 1.065126 GGGAGGGGTCTGTGAGAAATG 60.065 57.143 0.00 0.00 0.00 2.32
68 69 1.290134 GGGAGGGGTCTGTGAGAAAT 58.710 55.000 0.00 0.00 0.00 2.17
69 70 0.104672 TGGGAGGGGTCTGTGAGAAA 60.105 55.000 0.00 0.00 0.00 2.52
70 71 0.836400 GTGGGAGGGGTCTGTGAGAA 60.836 60.000 0.00 0.00 0.00 2.87
71 72 1.229209 GTGGGAGGGGTCTGTGAGA 60.229 63.158 0.00 0.00 0.00 3.27
72 73 1.536418 TGTGGGAGGGGTCTGTGAG 60.536 63.158 0.00 0.00 0.00 3.51
73 74 1.841556 GTGTGGGAGGGGTCTGTGA 60.842 63.158 0.00 0.00 0.00 3.58
74 75 2.146724 TGTGTGGGAGGGGTCTGTG 61.147 63.158 0.00 0.00 0.00 3.66
75 76 2.147387 GTGTGTGGGAGGGGTCTGT 61.147 63.158 0.00 0.00 0.00 3.41
76 77 2.750350 GTGTGTGGGAGGGGTCTG 59.250 66.667 0.00 0.00 0.00 3.51
77 78 2.923035 CGTGTGTGGGAGGGGTCT 60.923 66.667 0.00 0.00 0.00 3.85
78 79 2.047213 TTTCGTGTGTGGGAGGGGTC 62.047 60.000 0.00 0.00 0.00 4.46
79 80 1.637724 TTTTCGTGTGTGGGAGGGGT 61.638 55.000 0.00 0.00 0.00 4.95
80 81 1.149627 TTTTCGTGTGTGGGAGGGG 59.850 57.895 0.00 0.00 0.00 4.79
81 82 1.503818 CGTTTTCGTGTGTGGGAGGG 61.504 60.000 0.00 0.00 38.65 4.30
82 83 0.531090 TCGTTTTCGTGTGTGGGAGG 60.531 55.000 0.00 0.00 44.46 4.30
83 84 1.260561 CTTCGTTTTCGTGTGTGGGAG 59.739 52.381 0.00 0.00 44.46 4.30
84 85 1.292061 CTTCGTTTTCGTGTGTGGGA 58.708 50.000 0.00 0.00 44.46 4.37
85 86 0.316689 GCTTCGTTTTCGTGTGTGGG 60.317 55.000 0.00 0.00 44.46 4.61
86 87 0.375454 TGCTTCGTTTTCGTGTGTGG 59.625 50.000 0.00 0.00 44.46 4.17
87 88 1.201976 TGTGCTTCGTTTTCGTGTGTG 60.202 47.619 0.00 0.00 44.46 3.82
88 89 1.080298 TGTGCTTCGTTTTCGTGTGT 58.920 45.000 0.00 0.00 44.46 3.72
89 90 1.201976 TGTGTGCTTCGTTTTCGTGTG 60.202 47.619 0.00 0.00 44.46 3.82
90 91 1.080298 TGTGTGCTTCGTTTTCGTGT 58.920 45.000 0.00 0.00 44.46 4.49
91 92 1.201976 TGTGTGTGCTTCGTTTTCGTG 60.202 47.619 0.00 0.00 44.46 4.35
92 93 1.062002 CTGTGTGTGCTTCGTTTTCGT 59.938 47.619 0.00 0.00 44.46 3.85
93 94 1.730176 CTGTGTGTGCTTCGTTTTCG 58.270 50.000 0.00 0.00 45.64 3.46
94 95 1.466855 GCTGTGTGTGCTTCGTTTTC 58.533 50.000 0.00 0.00 0.00 2.29
95 96 0.100503 GGCTGTGTGTGCTTCGTTTT 59.899 50.000 0.00 0.00 0.00 2.43
96 97 0.748005 AGGCTGTGTGTGCTTCGTTT 60.748 50.000 0.00 0.00 0.00 3.60
97 98 1.153168 AGGCTGTGTGTGCTTCGTT 60.153 52.632 0.00 0.00 0.00 3.85
98 99 1.595382 GAGGCTGTGTGTGCTTCGT 60.595 57.895 0.00 0.00 0.00 3.85
99 100 2.320587 GGAGGCTGTGTGTGCTTCG 61.321 63.158 0.00 0.00 37.40 3.79
100 101 0.952984 GAGGAGGCTGTGTGTGCTTC 60.953 60.000 0.00 0.00 36.07 3.86
101 102 1.072159 GAGGAGGCTGTGTGTGCTT 59.928 57.895 0.00 0.00 0.00 3.91
102 103 2.746359 GAGGAGGCTGTGTGTGCT 59.254 61.111 0.00 0.00 0.00 4.40
103 104 2.359230 GGAGGAGGCTGTGTGTGC 60.359 66.667 0.00 0.00 0.00 4.57
104 105 1.302033 GTGGAGGAGGCTGTGTGTG 60.302 63.158 0.00 0.00 0.00 3.82
105 106 1.762522 CTGTGGAGGAGGCTGTGTGT 61.763 60.000 0.00 0.00 0.00 3.72
106 107 1.004080 CTGTGGAGGAGGCTGTGTG 60.004 63.158 0.00 0.00 0.00 3.82
107 108 2.888447 GCTGTGGAGGAGGCTGTGT 61.888 63.158 0.00 0.00 0.00 3.72
108 109 2.046507 GCTGTGGAGGAGGCTGTG 60.047 66.667 0.00 0.00 0.00 3.66
109 110 3.325753 GGCTGTGGAGGAGGCTGT 61.326 66.667 0.00 0.00 33.29 4.40
110 111 2.207501 ATTGGCTGTGGAGGAGGCTG 62.208 60.000 0.00 0.00 36.94 4.85
111 112 1.919600 GATTGGCTGTGGAGGAGGCT 61.920 60.000 0.00 0.00 36.94 4.58
112 113 1.452833 GATTGGCTGTGGAGGAGGC 60.453 63.158 0.00 0.00 36.55 4.70
113 114 1.225704 GGATTGGCTGTGGAGGAGG 59.774 63.158 0.00 0.00 0.00 4.30
114 115 1.153289 CGGATTGGCTGTGGAGGAG 60.153 63.158 0.00 0.00 0.00 3.69
115 116 1.612146 TCGGATTGGCTGTGGAGGA 60.612 57.895 0.00 0.00 0.00 3.71
116 117 1.450312 GTCGGATTGGCTGTGGAGG 60.450 63.158 0.00 0.00 0.00 4.30
117 118 1.811266 CGTCGGATTGGCTGTGGAG 60.811 63.158 0.00 0.00 0.00 3.86
118 119 2.264480 CGTCGGATTGGCTGTGGA 59.736 61.111 0.00 0.00 0.00 4.02
119 120 2.572095 TAGCGTCGGATTGGCTGTGG 62.572 60.000 10.25 0.00 37.62 4.17
120 121 1.148157 CTAGCGTCGGATTGGCTGTG 61.148 60.000 10.25 2.13 37.62 3.66
121 122 1.141881 CTAGCGTCGGATTGGCTGT 59.858 57.895 10.25 0.00 37.62 4.40
122 123 1.592669 CCTAGCGTCGGATTGGCTG 60.593 63.158 10.25 2.95 37.62 4.85
123 124 2.797278 CCCTAGCGTCGGATTGGCT 61.797 63.158 0.00 6.45 40.68 4.75
124 125 2.280186 CCCTAGCGTCGGATTGGC 60.280 66.667 0.00 0.00 0.00 4.52
125 126 0.529992 GAACCCTAGCGTCGGATTGG 60.530 60.000 0.00 0.00 0.00 3.16
126 127 0.460311 AGAACCCTAGCGTCGGATTG 59.540 55.000 0.00 0.00 0.00 2.67
127 128 0.460311 CAGAACCCTAGCGTCGGATT 59.540 55.000 0.00 0.00 0.00 3.01
128 129 2.017559 GCAGAACCCTAGCGTCGGAT 62.018 60.000 0.00 0.00 0.00 4.18
129 130 2.707849 GCAGAACCCTAGCGTCGGA 61.708 63.158 0.00 0.00 0.00 4.55
130 131 2.202756 GCAGAACCCTAGCGTCGG 60.203 66.667 0.00 0.00 0.00 4.79
131 132 2.202756 GGCAGAACCCTAGCGTCG 60.203 66.667 0.00 0.00 0.00 5.12
132 133 2.202756 CGGCAGAACCCTAGCGTC 60.203 66.667 0.00 0.00 33.26 5.19
133 134 2.678934 TCGGCAGAACCCTAGCGT 60.679 61.111 0.00 0.00 33.26 5.07
134 135 2.202756 GTCGGCAGAACCCTAGCG 60.203 66.667 0.00 0.00 33.26 4.26
135 136 1.448013 GTGTCGGCAGAACCCTAGC 60.448 63.158 0.00 0.00 33.26 3.42
136 137 1.153823 CGTGTCGGCAGAACCCTAG 60.154 63.158 0.00 0.00 33.26 3.02
137 138 1.592400 CTCGTGTCGGCAGAACCCTA 61.592 60.000 0.00 0.00 33.26 3.53
138 139 2.915659 TCGTGTCGGCAGAACCCT 60.916 61.111 0.00 0.00 33.26 4.34
139 140 2.432628 CTCGTGTCGGCAGAACCC 60.433 66.667 0.00 0.00 33.26 4.11
140 141 3.112709 GCTCGTGTCGGCAGAACC 61.113 66.667 0.00 0.00 0.00 3.62
141 142 3.112709 GGCTCGTGTCGGCAGAAC 61.113 66.667 0.00 0.00 0.00 3.01
142 143 4.717629 CGGCTCGTGTCGGCAGAA 62.718 66.667 3.09 0.00 37.69 3.02
165 166 4.148825 ATCTCTGGTGACCGCGGC 62.149 66.667 28.58 19.01 0.00 6.53
166 167 2.202797 CATCTCTGGTGACCGCGG 60.203 66.667 26.86 26.86 0.00 6.46
167 168 2.202797 CCATCTCTGGTGACCGCG 60.203 66.667 0.00 0.00 37.79 6.46
168 169 1.153549 GTCCATCTCTGGTGACCGC 60.154 63.158 0.00 0.00 43.61 5.68
169 170 1.139734 CGTCCATCTCTGGTGACCG 59.860 63.158 0.00 0.00 43.61 4.79
170 171 1.153549 GCGTCCATCTCTGGTGACC 60.154 63.158 0.00 0.00 43.61 4.02
171 172 1.153549 GGCGTCCATCTCTGGTGAC 60.154 63.158 0.00 0.00 43.61 3.67
172 173 2.710902 CGGCGTCCATCTCTGGTGA 61.711 63.158 0.00 0.00 43.61 4.02
173 174 2.202797 CGGCGTCCATCTCTGGTG 60.203 66.667 0.00 0.00 43.61 4.17
174 175 4.148825 GCGGCGTCCATCTCTGGT 62.149 66.667 9.37 0.00 43.61 4.00
178 179 4.933064 CTCCGCGGCGTCCATCTC 62.933 72.222 23.51 0.00 0.00 2.75
180 181 3.792053 AATCTCCGCGGCGTCCATC 62.792 63.158 23.51 0.00 0.00 3.51
181 182 3.849951 AATCTCCGCGGCGTCCAT 61.850 61.111 23.51 0.02 0.00 3.41
182 183 4.812476 CAATCTCCGCGGCGTCCA 62.812 66.667 23.51 0.55 0.00 4.02
190 191 3.929948 CTTCGCCGCAATCTCCGC 61.930 66.667 0.00 0.00 0.00 5.54
191 192 3.264897 CCTTCGCCGCAATCTCCG 61.265 66.667 0.00 0.00 0.00 4.63
192 193 2.125106 ACCTTCGCCGCAATCTCC 60.125 61.111 0.00 0.00 0.00 3.71
193 194 1.153549 AGACCTTCGCCGCAATCTC 60.154 57.895 0.00 0.00 0.00 2.75
194 195 1.448540 CAGACCTTCGCCGCAATCT 60.449 57.895 0.00 0.00 0.00 2.40
195 196 3.093278 CAGACCTTCGCCGCAATC 58.907 61.111 0.00 0.00 0.00 2.67
196 197 3.127533 GCAGACCTTCGCCGCAAT 61.128 61.111 0.00 0.00 0.00 3.56
236 237 3.764160 GAGATGCGGGAGGCCTTGG 62.764 68.421 6.77 0.00 42.61 3.61
237 238 2.203126 GAGATGCGGGAGGCCTTG 60.203 66.667 6.77 0.58 42.61 3.61
238 239 2.366167 AGAGATGCGGGAGGCCTT 60.366 61.111 6.77 0.00 42.61 4.35
239 240 3.160047 CAGAGATGCGGGAGGCCT 61.160 66.667 3.86 3.86 42.61 5.19
240 241 4.247380 CCAGAGATGCGGGAGGCC 62.247 72.222 0.00 0.00 42.61 5.19
241 242 4.925861 GCCAGAGATGCGGGAGGC 62.926 72.222 0.00 0.00 43.96 4.70
242 243 4.247380 GGCCAGAGATGCGGGAGG 62.247 72.222 0.00 0.00 33.08 4.30
243 244 3.160047 AGGCCAGAGATGCGGGAG 61.160 66.667 5.01 0.00 33.08 4.30
244 245 3.473647 CAGGCCAGAGATGCGGGA 61.474 66.667 5.01 0.00 33.08 5.14
245 246 4.559063 CCAGGCCAGAGATGCGGG 62.559 72.222 5.01 0.00 34.63 6.13
246 247 3.457625 CTCCAGGCCAGAGATGCGG 62.458 68.421 15.93 0.00 32.86 5.69
247 248 2.108566 CTCCAGGCCAGAGATGCG 59.891 66.667 15.93 0.00 32.86 4.73
248 249 2.509916 CCTCCAGGCCAGAGATGC 59.490 66.667 21.21 0.00 32.86 3.91
258 259 1.458588 GGAGACCCTAGCCTCCAGG 60.459 68.421 15.15 0.17 46.28 4.45
259 260 4.286447 GGAGACCCTAGCCTCCAG 57.714 66.667 15.15 0.00 46.28 3.86
270 271 2.286127 CGGCTTCGAGAAGGGAGACC 62.286 65.000 13.92 5.85 44.17 3.85
271 272 1.139947 CGGCTTCGAGAAGGGAGAC 59.860 63.158 13.92 0.00 38.80 3.36
272 273 1.001269 TCGGCTTCGAGAAGGGAGA 60.001 57.895 13.92 0.00 38.07 3.71
273 274 3.604629 TCGGCTTCGAGAAGGGAG 58.395 61.111 13.92 0.00 38.07 4.30
281 282 2.430244 GCGTGTTCTCGGCTTCGA 60.430 61.111 0.00 0.00 41.01 3.71
282 283 3.827784 CGCGTGTTCTCGGCTTCG 61.828 66.667 0.00 0.00 0.00 3.79
283 284 4.135493 GCGCGTGTTCTCGGCTTC 62.135 66.667 8.43 0.00 0.00 3.86
284 285 4.664677 AGCGCGTGTTCTCGGCTT 62.665 61.111 8.43 0.00 35.24 4.35
285 286 4.664677 AAGCGCGTGTTCTCGGCT 62.665 61.111 8.43 0.00 38.32 5.52
286 287 4.135493 GAAGCGCGTGTTCTCGGC 62.135 66.667 8.43 0.00 0.00 5.54
287 288 2.720758 CTGAAGCGCGTGTTCTCGG 61.721 63.158 19.61 7.05 0.00 4.63
288 289 2.720758 CCTGAAGCGCGTGTTCTCG 61.721 63.158 19.61 12.56 0.00 4.04
289 290 0.944311 TTCCTGAAGCGCGTGTTCTC 60.944 55.000 19.61 6.52 0.00 2.87
290 291 0.946221 CTTCCTGAAGCGCGTGTTCT 60.946 55.000 19.61 1.87 0.00 3.01
291 292 1.493311 CTTCCTGAAGCGCGTGTTC 59.507 57.895 8.43 12.11 0.00 3.18
292 293 1.961277 CCTTCCTGAAGCGCGTGTT 60.961 57.895 8.43 0.82 37.11 3.32
293 294 2.357517 CCTTCCTGAAGCGCGTGT 60.358 61.111 8.43 0.00 37.11 4.49
294 295 3.793144 GCCTTCCTGAAGCGCGTG 61.793 66.667 8.43 0.00 37.11 5.34
298 299 3.121030 CACGGCCTTCCTGAAGCG 61.121 66.667 0.00 3.81 37.11 4.68
299 300 3.435186 GCACGGCCTTCCTGAAGC 61.435 66.667 0.00 0.00 37.11 3.86
300 301 2.747855 GGCACGGCCTTCCTGAAG 60.748 66.667 0.00 0.00 46.69 3.02
310 311 1.644786 GACTGTACATTGGGCACGGC 61.645 60.000 0.00 0.00 0.00 5.68
311 312 0.321210 TGACTGTACATTGGGCACGG 60.321 55.000 0.00 0.00 0.00 4.94
312 313 1.518325 TTGACTGTACATTGGGCACG 58.482 50.000 0.00 0.00 0.00 5.34
313 314 2.164219 CCATTGACTGTACATTGGGCAC 59.836 50.000 0.00 0.00 37.53 5.01
314 315 2.445427 CCATTGACTGTACATTGGGCA 58.555 47.619 0.00 0.00 37.53 5.36
315 316 1.750778 CCCATTGACTGTACATTGGGC 59.249 52.381 18.44 0.00 46.86 5.36
317 318 3.684908 TGACCCATTGACTGTACATTGG 58.315 45.455 0.00 0.00 39.52 3.16
318 319 5.415389 TGAATGACCCATTGACTGTACATTG 59.585 40.000 0.00 0.00 33.90 2.82
319 320 5.569355 TGAATGACCCATTGACTGTACATT 58.431 37.500 0.00 0.00 33.90 2.71
320 321 5.178096 TGAATGACCCATTGACTGTACAT 57.822 39.130 0.00 0.00 33.90 2.29
321 322 4.565444 CCTGAATGACCCATTGACTGTACA 60.565 45.833 0.00 0.00 33.90 2.90
322 323 3.941483 CCTGAATGACCCATTGACTGTAC 59.059 47.826 0.00 0.00 33.90 2.90
323 324 3.622206 GCCTGAATGACCCATTGACTGTA 60.622 47.826 0.00 0.00 33.90 2.74
324 325 2.881403 GCCTGAATGACCCATTGACTGT 60.881 50.000 0.00 0.00 33.90 3.55
325 326 1.747355 GCCTGAATGACCCATTGACTG 59.253 52.381 0.00 0.00 33.90 3.51
326 327 1.355381 TGCCTGAATGACCCATTGACT 59.645 47.619 0.00 0.00 33.90 3.41
327 328 1.838112 TGCCTGAATGACCCATTGAC 58.162 50.000 0.00 0.00 33.90 3.18
328 329 2.170166 GTTGCCTGAATGACCCATTGA 58.830 47.619 0.00 0.00 33.90 2.57
329 330 1.205417 GGTTGCCTGAATGACCCATTG 59.795 52.381 0.00 0.00 33.90 2.82
330 331 1.203162 TGGTTGCCTGAATGACCCATT 60.203 47.619 0.00 0.00 36.72 3.16
331 332 0.409092 TGGTTGCCTGAATGACCCAT 59.591 50.000 0.00 0.00 0.00 4.00
332 333 0.251297 CTGGTTGCCTGAATGACCCA 60.251 55.000 0.00 0.00 0.00 4.51
333 334 0.967380 CCTGGTTGCCTGAATGACCC 60.967 60.000 0.00 0.00 0.00 4.46
334 335 0.967380 CCCTGGTTGCCTGAATGACC 60.967 60.000 0.00 0.00 0.00 4.02
335 336 1.598701 GCCCTGGTTGCCTGAATGAC 61.599 60.000 0.00 0.00 0.00 3.06
336 337 1.304381 GCCCTGGTTGCCTGAATGA 60.304 57.895 0.00 0.00 0.00 2.57
337 338 2.353610 GGCCCTGGTTGCCTGAATG 61.354 63.158 6.71 0.00 45.70 2.67
338 339 2.037847 GGCCCTGGTTGCCTGAAT 59.962 61.111 6.71 0.00 45.70 2.57
344 345 4.621087 AGGTTGGGCCCTGGTTGC 62.621 66.667 25.70 6.31 38.26 4.17
345 346 1.908299 GAAGGTTGGGCCCTGGTTG 60.908 63.158 25.70 0.00 38.26 3.77
346 347 2.526110 GAAGGTTGGGCCCTGGTT 59.474 61.111 25.70 11.24 38.26 3.67
347 348 3.966543 CGAAGGTTGGGCCCTGGT 61.967 66.667 25.70 3.19 38.26 4.00
360 361 0.525668 CCTCGTCCAATCGACCGAAG 60.526 60.000 0.00 0.00 38.36 3.79
361 362 1.509463 CCTCGTCCAATCGACCGAA 59.491 57.895 0.00 0.00 38.36 4.30
362 363 2.412323 CCCTCGTCCAATCGACCGA 61.412 63.158 0.00 0.00 38.36 4.69
363 364 2.104331 CCCTCGTCCAATCGACCG 59.896 66.667 0.00 0.00 38.36 4.79
364 365 0.036671 AAACCCTCGTCCAATCGACC 60.037 55.000 0.00 0.00 38.36 4.79
365 366 1.356938 GAAACCCTCGTCCAATCGAC 58.643 55.000 0.00 0.00 38.21 4.20
366 367 0.108992 CGAAACCCTCGTCCAATCGA 60.109 55.000 0.00 0.00 42.89 3.59
367 368 1.082117 CCGAAACCCTCGTCCAATCG 61.082 60.000 0.00 0.00 46.65 3.34
368 369 1.366854 GCCGAAACCCTCGTCCAATC 61.367 60.000 0.00 0.00 46.65 2.67
369 370 1.376812 GCCGAAACCCTCGTCCAAT 60.377 57.895 0.00 0.00 46.65 3.16
370 371 2.031465 GCCGAAACCCTCGTCCAA 59.969 61.111 0.00 0.00 46.65 3.53
371 372 4.367023 CGCCGAAACCCTCGTCCA 62.367 66.667 0.00 0.00 46.65 4.02
372 373 3.366739 ATCGCCGAAACCCTCGTCC 62.367 63.158 0.00 0.00 46.65 4.79
373 374 2.165301 CATCGCCGAAACCCTCGTC 61.165 63.158 0.00 0.00 46.65 4.20
374 375 2.125673 CATCGCCGAAACCCTCGT 60.126 61.111 0.00 0.00 46.65 4.18
376 377 1.521681 CCTCATCGCCGAAACCCTC 60.522 63.158 0.00 0.00 0.00 4.30
377 378 1.987855 TCCTCATCGCCGAAACCCT 60.988 57.895 0.00 0.00 0.00 4.34
378 379 1.814169 GTCCTCATCGCCGAAACCC 60.814 63.158 0.00 0.00 0.00 4.11
379 380 2.165301 CGTCCTCATCGCCGAAACC 61.165 63.158 0.00 0.00 0.00 3.27
380 381 1.411493 GACGTCCTCATCGCCGAAAC 61.411 60.000 3.51 0.00 0.00 2.78
381 382 1.153901 GACGTCCTCATCGCCGAAA 60.154 57.895 3.51 0.00 0.00 3.46
382 383 2.488355 GACGTCCTCATCGCCGAA 59.512 61.111 3.51 0.00 0.00 4.30
383 384 3.872728 CGACGTCCTCATCGCCGA 61.873 66.667 10.58 0.00 36.41 5.54
384 385 3.872728 TCGACGTCCTCATCGCCG 61.873 66.667 10.58 0.00 38.24 6.46
385 386 2.278013 GTCGACGTCCTCATCGCC 60.278 66.667 10.58 0.00 38.24 5.54
386 387 2.278013 GGTCGACGTCCTCATCGC 60.278 66.667 10.58 0.00 38.24 4.58
387 388 2.022902 CGGTCGACGTCCTCATCG 59.977 66.667 10.58 2.38 39.72 3.84
388 389 2.404995 ACCGGTCGACGTCCTCATC 61.405 63.158 10.58 0.00 42.24 2.92
389 390 2.360852 ACCGGTCGACGTCCTCAT 60.361 61.111 10.58 0.00 42.24 2.90
390 391 3.359523 CACCGGTCGACGTCCTCA 61.360 66.667 2.59 0.00 42.24 3.86
391 392 2.320339 GATCACCGGTCGACGTCCTC 62.320 65.000 2.59 2.94 42.24 3.71
392 393 2.360852 ATCACCGGTCGACGTCCT 60.361 61.111 2.59 0.00 42.24 3.85
393 394 2.101770 GATCACCGGTCGACGTCC 59.898 66.667 2.59 0.59 42.24 4.79
394 395 2.277120 CGATCACCGGTCGACGTC 60.277 66.667 2.59 5.18 41.40 4.34
395 396 2.620112 AACGATCACCGGTCGACGT 61.620 57.895 19.72 19.37 43.93 4.34
396 397 2.150218 CAACGATCACCGGTCGACG 61.150 63.158 19.72 18.78 43.93 5.12
397 398 1.804326 CCAACGATCACCGGTCGAC 60.804 63.158 19.72 7.13 43.93 4.20
398 399 2.569657 CCAACGATCACCGGTCGA 59.430 61.111 19.72 14.12 43.93 4.20
399 400 3.186047 GCCAACGATCACCGGTCG 61.186 66.667 2.59 8.69 43.93 4.79
400 401 3.186047 CGCCAACGATCACCGGTC 61.186 66.667 2.59 0.00 43.93 4.79
401 402 3.687102 TCGCCAACGATCACCGGT 61.687 61.111 0.00 0.00 45.12 5.28
417 418 4.539881 GTCCTCGTCGCCGCTCTC 62.540 72.222 0.00 0.00 0.00 3.20
419 420 4.415332 TTGTCCTCGTCGCCGCTC 62.415 66.667 0.00 0.00 0.00 5.03
420 421 4.719369 GTTGTCCTCGTCGCCGCT 62.719 66.667 0.00 0.00 0.00 5.52
422 423 4.394078 TCGTTGTCCTCGTCGCCG 62.394 66.667 0.00 0.00 0.00 6.46
423 424 2.804090 GTCGTTGTCCTCGTCGCC 60.804 66.667 0.00 0.00 0.00 5.54
424 425 2.804090 GGTCGTTGTCCTCGTCGC 60.804 66.667 0.00 0.00 0.00 5.19
425 426 2.501222 CGGTCGTTGTCCTCGTCG 60.501 66.667 0.00 0.00 0.00 5.12
426 427 2.126580 CCGGTCGTTGTCCTCGTC 60.127 66.667 0.00 0.00 0.00 4.20
427 428 3.677648 CCCGGTCGTTGTCCTCGT 61.678 66.667 0.00 0.00 0.00 4.18
428 429 4.430765 CCCCGGTCGTTGTCCTCG 62.431 72.222 0.00 0.00 0.00 4.63
429 430 1.941999 CTACCCCGGTCGTTGTCCTC 61.942 65.000 0.00 0.00 0.00 3.71
430 431 1.980772 CTACCCCGGTCGTTGTCCT 60.981 63.158 0.00 0.00 0.00 3.85
431 432 1.941999 CTCTACCCCGGTCGTTGTCC 61.942 65.000 0.00 0.00 0.00 4.02
432 433 1.509923 CTCTACCCCGGTCGTTGTC 59.490 63.158 0.00 0.00 0.00 3.18
433 434 1.980772 CCTCTACCCCGGTCGTTGT 60.981 63.158 0.00 0.00 0.00 3.32
434 435 1.679977 TCCTCTACCCCGGTCGTTG 60.680 63.158 0.00 0.00 0.00 4.10
435 436 1.680314 GTCCTCTACCCCGGTCGTT 60.680 63.158 0.00 0.00 0.00 3.85
436 437 2.044551 GTCCTCTACCCCGGTCGT 60.045 66.667 0.00 0.00 0.00 4.34
437 438 3.207669 CGTCCTCTACCCCGGTCG 61.208 72.222 0.00 0.00 0.00 4.79
438 439 2.832201 CCGTCCTCTACCCCGGTC 60.832 72.222 0.00 0.00 35.78 4.79
440 441 3.145551 CACCGTCCTCTACCCCGG 61.146 72.222 0.00 0.00 45.72 5.73
441 442 3.834799 GCACCGTCCTCTACCCCG 61.835 72.222 0.00 0.00 0.00 5.73
442 443 2.363925 AGCACCGTCCTCTACCCC 60.364 66.667 0.00 0.00 0.00 4.95
443 444 2.893398 CAGCACCGTCCTCTACCC 59.107 66.667 0.00 0.00 0.00 3.69
444 445 2.184579 GCAGCACCGTCCTCTACC 59.815 66.667 0.00 0.00 0.00 3.18
445 446 1.153745 CTGCAGCACCGTCCTCTAC 60.154 63.158 0.00 0.00 0.00 2.59
446 447 2.351244 CCTGCAGCACCGTCCTCTA 61.351 63.158 8.66 0.00 0.00 2.43
447 448 3.699894 CCTGCAGCACCGTCCTCT 61.700 66.667 8.66 0.00 0.00 3.69
448 449 4.767255 CCCTGCAGCACCGTCCTC 62.767 72.222 8.66 0.00 0.00 3.71
450 451 4.101448 ATCCCTGCAGCACCGTCC 62.101 66.667 8.66 0.00 0.00 4.79
451 452 2.803155 TTCATCCCTGCAGCACCGTC 62.803 60.000 8.66 0.00 0.00 4.79
452 453 2.809861 CTTCATCCCTGCAGCACCGT 62.810 60.000 8.66 0.00 0.00 4.83
453 454 2.046023 TTCATCCCTGCAGCACCG 60.046 61.111 8.66 0.00 0.00 4.94
454 455 1.751927 CCTTCATCCCTGCAGCACC 60.752 63.158 8.66 0.00 0.00 5.01
455 456 1.028868 GTCCTTCATCCCTGCAGCAC 61.029 60.000 8.66 0.00 0.00 4.40
456 457 1.300963 GTCCTTCATCCCTGCAGCA 59.699 57.895 8.66 0.00 0.00 4.41
457 458 1.817099 CGTCCTTCATCCCTGCAGC 60.817 63.158 8.66 0.00 0.00 5.25
458 459 0.036010 AACGTCCTTCATCCCTGCAG 60.036 55.000 6.78 6.78 0.00 4.41
459 460 0.321564 CAACGTCCTTCATCCCTGCA 60.322 55.000 0.00 0.00 0.00 4.41
460 461 0.321653 ACAACGTCCTTCATCCCTGC 60.322 55.000 0.00 0.00 0.00 4.85
461 462 1.806542 CAACAACGTCCTTCATCCCTG 59.193 52.381 0.00 0.00 0.00 4.45
462 463 1.882352 GCAACAACGTCCTTCATCCCT 60.882 52.381 0.00 0.00 0.00 4.20
463 464 0.521735 GCAACAACGTCCTTCATCCC 59.478 55.000 0.00 0.00 0.00 3.85
464 465 0.521735 GGCAACAACGTCCTTCATCC 59.478 55.000 0.00 0.00 0.00 3.51
465 466 0.165944 CGGCAACAACGTCCTTCATC 59.834 55.000 0.00 0.00 0.00 2.92
466 467 0.534203 ACGGCAACAACGTCCTTCAT 60.534 50.000 0.00 0.00 41.25 2.57
467 468 0.745128 AACGGCAACAACGTCCTTCA 60.745 50.000 0.00 0.00 44.83 3.02
468 469 0.041576 GAACGGCAACAACGTCCTTC 60.042 55.000 0.00 0.00 44.83 3.46
469 470 1.768112 CGAACGGCAACAACGTCCTT 61.768 55.000 0.00 0.00 44.83 3.36
470 471 2.241880 CGAACGGCAACAACGTCCT 61.242 57.895 0.00 0.00 44.83 3.85
471 472 2.247267 CGAACGGCAACAACGTCC 59.753 61.111 0.00 0.00 44.83 4.79
472 473 1.367195 CACGAACGGCAACAACGTC 60.367 57.895 0.00 0.00 44.83 4.34
474 475 2.720750 GCACGAACGGCAACAACG 60.721 61.111 0.00 0.00 37.36 4.10
475 476 2.720750 CGCACGAACGGCAACAAC 60.721 61.111 0.00 0.00 0.00 3.32
476 477 4.599434 GCGCACGAACGGCAACAA 62.599 61.111 0.30 0.00 0.00 2.83
493 494 2.465097 CTATCGCCTCCTTCCTCGCG 62.465 65.000 0.00 0.00 45.76 5.87
494 495 1.173444 TCTATCGCCTCCTTCCTCGC 61.173 60.000 0.00 0.00 0.00 5.03
495 496 1.268352 CTTCTATCGCCTCCTTCCTCG 59.732 57.143 0.00 0.00 0.00 4.63
496 497 1.616374 CCTTCTATCGCCTCCTTCCTC 59.384 57.143 0.00 0.00 0.00 3.71
497 498 1.710816 CCTTCTATCGCCTCCTTCCT 58.289 55.000 0.00 0.00 0.00 3.36
498 499 0.682292 CCCTTCTATCGCCTCCTTCC 59.318 60.000 0.00 0.00 0.00 3.46
499 500 1.069358 CACCCTTCTATCGCCTCCTTC 59.931 57.143 0.00 0.00 0.00 3.46
500 501 1.123928 CACCCTTCTATCGCCTCCTT 58.876 55.000 0.00 0.00 0.00 3.36
501 502 0.032017 ACACCCTTCTATCGCCTCCT 60.032 55.000 0.00 0.00 0.00 3.69
502 503 0.105039 CACACCCTTCTATCGCCTCC 59.895 60.000 0.00 0.00 0.00 4.30
503 504 1.112113 TCACACCCTTCTATCGCCTC 58.888 55.000 0.00 0.00 0.00 4.70
504 505 1.794714 ATCACACCCTTCTATCGCCT 58.205 50.000 0.00 0.00 0.00 5.52
505 506 3.963428 ATATCACACCCTTCTATCGCC 57.037 47.619 0.00 0.00 0.00 5.54
506 507 4.857588 CGTTATATCACACCCTTCTATCGC 59.142 45.833 0.00 0.00 0.00 4.58
507 508 5.399858 CCGTTATATCACACCCTTCTATCG 58.600 45.833 0.00 0.00 0.00 2.92
508 509 5.169295 GCCGTTATATCACACCCTTCTATC 58.831 45.833 0.00 0.00 0.00 2.08
509 510 4.020485 GGCCGTTATATCACACCCTTCTAT 60.020 45.833 0.00 0.00 0.00 1.98
510 511 3.322828 GGCCGTTATATCACACCCTTCTA 59.677 47.826 0.00 0.00 0.00 2.10
511 512 2.104281 GGCCGTTATATCACACCCTTCT 59.896 50.000 0.00 0.00 0.00 2.85
512 513 2.490991 GGCCGTTATATCACACCCTTC 58.509 52.381 0.00 0.00 0.00 3.46
513 514 1.142262 GGGCCGTTATATCACACCCTT 59.858 52.381 0.00 0.00 32.19 3.95
514 515 0.763035 GGGCCGTTATATCACACCCT 59.237 55.000 0.00 0.00 32.19 4.34
515 516 0.763035 AGGGCCGTTATATCACACCC 59.237 55.000 0.00 6.93 34.23 4.61
516 517 2.631545 ACTAGGGCCGTTATATCACACC 59.368 50.000 1.81 0.00 0.00 4.16
517 518 3.319972 TGACTAGGGCCGTTATATCACAC 59.680 47.826 1.81 0.00 0.00 3.82
518 519 3.568443 TGACTAGGGCCGTTATATCACA 58.432 45.455 1.81 0.00 0.00 3.58
519 520 4.595762 TTGACTAGGGCCGTTATATCAC 57.404 45.455 1.81 0.00 0.00 3.06
520 521 4.500205 CGTTTGACTAGGGCCGTTATATCA 60.500 45.833 1.81 0.00 0.00 2.15
521 522 3.985925 CGTTTGACTAGGGCCGTTATATC 59.014 47.826 1.81 0.00 0.00 1.63
522 523 3.243975 CCGTTTGACTAGGGCCGTTATAT 60.244 47.826 1.81 0.00 0.00 0.86
523 524 2.101249 CCGTTTGACTAGGGCCGTTATA 59.899 50.000 1.81 0.00 0.00 0.98
524 525 1.134610 CCGTTTGACTAGGGCCGTTAT 60.135 52.381 1.81 0.00 0.00 1.89
525 526 0.247185 CCGTTTGACTAGGGCCGTTA 59.753 55.000 1.81 0.00 0.00 3.18
526 527 1.004200 CCGTTTGACTAGGGCCGTT 60.004 57.895 1.81 0.00 0.00 4.44
527 528 1.262640 ATCCGTTTGACTAGGGCCGT 61.263 55.000 2.24 2.24 0.00 5.68
528 529 0.529992 GATCCGTTTGACTAGGGCCG 60.530 60.000 0.00 0.00 0.00 6.13
529 530 0.831307 AGATCCGTTTGACTAGGGCC 59.169 55.000 0.00 0.00 0.00 5.80
530 531 1.480954 TCAGATCCGTTTGACTAGGGC 59.519 52.381 0.00 0.00 0.00 5.19
531 532 3.722147 CATCAGATCCGTTTGACTAGGG 58.278 50.000 0.00 0.00 0.00 3.53
532 533 3.126831 GCATCAGATCCGTTTGACTAGG 58.873 50.000 0.00 0.00 0.00 3.02
533 534 4.047822 GAGCATCAGATCCGTTTGACTAG 58.952 47.826 0.00 0.00 33.17 2.57
534 535 3.489229 CGAGCATCAGATCCGTTTGACTA 60.489 47.826 0.00 0.00 33.17 2.59
535 536 2.736719 CGAGCATCAGATCCGTTTGACT 60.737 50.000 0.00 0.00 33.17 3.41
536 537 1.590238 CGAGCATCAGATCCGTTTGAC 59.410 52.381 0.00 0.00 33.17 3.18
537 538 1.471501 CCGAGCATCAGATCCGTTTGA 60.472 52.381 0.00 0.00 33.17 2.69
538 539 0.933097 CCGAGCATCAGATCCGTTTG 59.067 55.000 0.00 0.00 33.17 2.93
539 540 0.811616 GCCGAGCATCAGATCCGTTT 60.812 55.000 0.00 0.00 33.17 3.60
540 541 1.227380 GCCGAGCATCAGATCCGTT 60.227 57.895 0.00 0.00 33.17 4.44
541 542 2.360949 CTGCCGAGCATCAGATCCGT 62.361 60.000 0.00 0.00 38.13 4.69
542 543 1.664017 CTGCCGAGCATCAGATCCG 60.664 63.158 0.00 0.00 38.13 4.18
543 544 1.301558 CCTGCCGAGCATCAGATCC 60.302 63.158 0.00 0.00 38.13 3.36
544 545 1.960250 GCCTGCCGAGCATCAGATC 60.960 63.158 0.00 0.00 38.13 2.75
545 546 2.110627 GCCTGCCGAGCATCAGAT 59.889 61.111 0.00 0.00 38.13 2.90
546 547 4.166888 GGCCTGCCGAGCATCAGA 62.167 66.667 0.00 0.00 38.13 3.27
568 569 2.352388 TCTAAAAAGGGCGATGTTCGG 58.648 47.619 0.00 0.00 40.84 4.30
569 570 4.413495 TTTCTAAAAAGGGCGATGTTCG 57.587 40.909 0.00 0.00 43.89 3.95
570 571 5.800438 GTCATTTCTAAAAAGGGCGATGTTC 59.200 40.000 0.00 0.00 0.00 3.18
571 572 5.336451 GGTCATTTCTAAAAAGGGCGATGTT 60.336 40.000 0.00 0.00 31.73 2.71
572 573 4.157840 GGTCATTTCTAAAAAGGGCGATGT 59.842 41.667 0.00 0.00 31.73 3.06
573 574 4.157656 TGGTCATTTCTAAAAAGGGCGATG 59.842 41.667 0.00 0.00 31.73 3.84
574 575 4.340617 TGGTCATTTCTAAAAAGGGCGAT 58.659 39.130 0.00 0.00 31.73 4.58
575 576 3.757270 TGGTCATTTCTAAAAAGGGCGA 58.243 40.909 0.00 0.00 31.73 5.54
576 577 4.217550 TCTTGGTCATTTCTAAAAAGGGCG 59.782 41.667 0.00 0.00 31.73 6.13
577 578 5.722021 TCTTGGTCATTTCTAAAAAGGGC 57.278 39.130 0.00 0.00 30.22 5.19
615 616 7.305474 AGGATTGTCATAAAACGTTCACATTC 58.695 34.615 0.00 6.07 0.00 2.67
625 626 7.338449 TGCTAGGGTAAAGGATTGTCATAAAAC 59.662 37.037 0.00 0.00 0.00 2.43
634 635 7.410120 AAGAAAATGCTAGGGTAAAGGATTG 57.590 36.000 0.00 0.00 35.48 2.67
641 642 6.113411 GCTCTGTAAGAAAATGCTAGGGTAA 58.887 40.000 0.00 0.00 46.34 2.85
643 644 4.518249 GCTCTGTAAGAAAATGCTAGGGT 58.482 43.478 0.00 0.00 46.34 4.34
644 645 3.557595 CGCTCTGTAAGAAAATGCTAGGG 59.442 47.826 0.00 0.00 46.34 3.53
646 647 6.256539 TGATTCGCTCTGTAAGAAAATGCTAG 59.743 38.462 0.00 0.00 46.34 3.42
647 648 6.036083 GTGATTCGCTCTGTAAGAAAATGCTA 59.964 38.462 0.00 0.00 46.34 3.49
648 649 4.937620 TGATTCGCTCTGTAAGAAAATGCT 59.062 37.500 0.00 0.00 46.34 3.79
649 650 5.024555 GTGATTCGCTCTGTAAGAAAATGC 58.975 41.667 0.00 0.00 46.34 3.56
733 740 3.370104 GAGGGGTCTCTGAGAAATGAGA 58.630 50.000 9.31 0.00 37.07 3.27
744 751 1.536662 GTGTGTGGGAGGGGTCTCT 60.537 63.158 0.00 0.00 39.86 3.10
762 769 0.839477 CTGCGTGTGCTTCGTTTTTG 59.161 50.000 0.00 0.00 43.34 2.44
763 770 0.865639 GCTGCGTGTGCTTCGTTTTT 60.866 50.000 0.00 0.00 43.34 1.94
764 771 1.298339 GCTGCGTGTGCTTCGTTTT 60.298 52.632 0.00 0.00 43.34 2.43
1015 1027 2.526110 GAAGGTTGGGCCCTGGTT 59.474 61.111 25.70 11.24 38.26 3.67
1080 1092 0.324645 AACCATTCACCAGATGGCCC 60.325 55.000 0.00 0.00 38.99 5.80
1123 1135 1.751927 CAACAGCCATCCCCTCTGC 60.752 63.158 0.00 0.00 0.00 4.26
1205 1217 3.055719 CAATCACCGGCGGCACTT 61.056 61.111 28.71 13.85 0.00 3.16
1275 1287 3.308595 GTGGCATAATCGAAACATCGTCA 59.691 43.478 0.00 0.00 0.00 4.35
1278 1290 2.538037 TCGTGGCATAATCGAAACATCG 59.462 45.455 0.00 0.00 0.00 3.84
1305 1317 4.684877 TGGTAATCATCGCTTTACGCTTA 58.315 39.130 0.00 0.00 43.23 3.09
1495 1507 2.697751 CCTCGTCCTCATCTTCAATCCT 59.302 50.000 0.00 0.00 0.00 3.24
1528 1543 2.352127 GCACTTCAAGAATGCAGGTTCC 60.352 50.000 0.00 0.00 39.23 3.62
1532 1547 2.094854 GGAAGCACTTCAAGAATGCAGG 60.095 50.000 12.21 0.00 41.97 4.85
1534 1549 1.536766 CGGAAGCACTTCAAGAATGCA 59.463 47.619 12.21 0.00 41.97 3.96
1535 1550 1.806542 TCGGAAGCACTTCAAGAATGC 59.193 47.619 12.21 0.00 41.20 3.56
1541 1556 3.401033 TCATCTTCGGAAGCACTTCAA 57.599 42.857 12.90 0.00 41.20 2.69
1549 1564 4.180057 CTCTTGTCCTTCATCTTCGGAAG 58.820 47.826 11.54 11.54 41.08 3.46
1553 1568 2.419297 CCCCTCTTGTCCTTCATCTTCG 60.419 54.545 0.00 0.00 0.00 3.79
1585 1600 4.927267 ACTCTTCACCCAATTCACCATA 57.073 40.909 0.00 0.00 0.00 2.74
1725 1740 9.056005 GCATCCATAACATCTTTATAGTTCACA 57.944 33.333 0.00 0.00 0.00 3.58
1753 1768 1.732259 AGCATTCCTTTTGCGACGTAG 59.268 47.619 0.00 0.00 44.82 3.51
1820 1835 2.659428 AGCAAAGTTCAGCTTGTTCCT 58.341 42.857 0.00 0.00 38.01 3.36
1857 1872 2.996621 CTCAGTTTGCTTTCGGTAGAGG 59.003 50.000 0.00 0.00 0.00 3.69
1893 1908 4.826733 CCATTATGCACCATACTGGCTTTA 59.173 41.667 8.17 0.00 42.67 1.85
1902 1917 4.787135 TCCTTGTCCATTATGCACCATA 57.213 40.909 0.00 0.00 0.00 2.74
1914 1929 4.290985 TCCATCTGGTTAAATCCTTGTCCA 59.709 41.667 0.00 0.00 36.34 4.02
1928 1943 2.200081 ACCTAACAGCATCCATCTGGT 58.800 47.619 0.00 0.00 35.94 4.00
1972 1987 9.996554 ACAGTTTATACTAGCAATGCATATACA 57.003 29.630 8.35 0.00 31.96 2.29
1982 1997 9.745880 GCTATCAGTTACAGTTTATACTAGCAA 57.254 33.333 0.00 0.00 31.96 3.91
2012 2027 9.372541 GCATGCATAATTGTGTAAAATAATTGC 57.627 29.630 14.21 1.22 0.00 3.56
2082 2097 5.709631 TGAAGTCTACATTTTGCAGGCAATA 59.290 36.000 7.62 3.48 35.70 1.90
2209 2225 2.355756 CGGCATGAGGGATGTTTGTTAG 59.644 50.000 0.00 0.00 34.14 2.34
2257 2273 8.522830 TCCAAATAGAACTGAACATCAAAATCC 58.477 33.333 0.00 0.00 0.00 3.01
2395 2411 0.531532 CCAATGAGCGCTAGTCAGGG 60.532 60.000 11.50 7.06 37.77 4.45
2399 2415 0.108138 ACCACCAATGAGCGCTAGTC 60.108 55.000 11.50 0.00 0.00 2.59
2425 2441 8.817100 CCAAAAATTAAACTTGAGAACCAGAAC 58.183 33.333 0.00 0.00 0.00 3.01
2479 2504 9.465985 TCGCGTCACAAATATAATTATGTTAGA 57.534 29.630 5.77 4.82 0.00 2.10
2522 2547 6.791887 ATACTGCATATGCTTGATGTGTAC 57.208 37.500 27.13 0.00 42.66 2.90
2523 2548 7.806409 AAATACTGCATATGCTTGATGTGTA 57.194 32.000 27.13 16.86 42.66 2.90
2524 2549 6.704289 AAATACTGCATATGCTTGATGTGT 57.296 33.333 27.13 15.54 42.66 3.72
2565 2590 5.610398 TGATTGGAGCGATACATACATTGT 58.390 37.500 0.00 0.00 42.62 2.71
2568 2593 7.840931 TCTTATGATTGGAGCGATACATACAT 58.159 34.615 9.56 9.56 0.00 2.29
2569 2594 7.176690 TCTCTTATGATTGGAGCGATACATACA 59.823 37.037 0.00 0.00 0.00 2.29
2570 2595 7.539436 TCTCTTATGATTGGAGCGATACATAC 58.461 38.462 0.00 0.00 0.00 2.39
2571 2596 7.703058 TCTCTTATGATTGGAGCGATACATA 57.297 36.000 0.00 0.00 0.00 2.29
2642 2667 7.852263 TCCCCTAAACAAAGAAAACAATTTGA 58.148 30.769 2.79 0.00 38.42 2.69
2710 2735 3.057104 TCATCGACAGTTTTCTTAGGCGA 60.057 43.478 0.00 0.00 0.00 5.54
2746 2771 6.369890 TGACAGAACTTGAGAGCATATTTGTC 59.630 38.462 0.00 0.00 0.00 3.18
2783 2808 3.662247 ACAGCTGTTTAGAGTAACGCT 57.338 42.857 15.25 0.00 37.92 5.07
2786 2811 4.210537 TCGCAAACAGCTGTTTAGAGTAAC 59.789 41.667 37.19 21.19 45.54 2.50
2793 2818 6.983890 TCTGATATATCGCAAACAGCTGTTTA 59.016 34.615 37.19 25.68 45.54 2.01
2802 2827 6.844696 TCCTTGTTCTGATATATCGCAAAC 57.155 37.500 8.19 11.48 0.00 2.93
2826 2851 1.151413 AGTCAGGGAAAGTAGGGGTCA 59.849 52.381 0.00 0.00 0.00 4.02
2855 2880 4.326826 CAAAGGTCAGCATCTGGAGTTAA 58.673 43.478 0.00 0.00 31.51 2.01
2878 2903 3.119316 TGCAAAATATTACAAGGGCCACG 60.119 43.478 6.18 0.00 0.00 4.94
3047 3073 0.749649 ACCGCATCAGAGATCAGACC 59.250 55.000 0.00 0.00 0.00 3.85
3101 3127 1.089920 GTGAATCGGCAGTTGAGCAT 58.910 50.000 0.00 0.00 35.83 3.79
3154 3183 9.738832 GTTTCCTGTTTTGCACTAAAAAGTATA 57.261 29.630 0.00 0.00 39.79 1.47
3155 3184 7.709182 GGTTTCCTGTTTTGCACTAAAAAGTAT 59.291 33.333 0.00 0.00 39.79 2.12
3161 3190 3.695060 TCGGTTTCCTGTTTTGCACTAAA 59.305 39.130 0.00 0.00 0.00 1.85
3180 3209 1.199624 GTTGTTGCTGTTGCTTTCGG 58.800 50.000 0.00 0.00 40.48 4.30
3188 3217 1.066908 CGGGTCATTGTTGTTGCTGTT 59.933 47.619 0.00 0.00 0.00 3.16
3190 3219 0.950836 TCGGGTCATTGTTGTTGCTG 59.049 50.000 0.00 0.00 0.00 4.41
3211 3252 0.674581 CCATGCTCCTGCGAGTTCAA 60.675 55.000 0.00 0.00 43.34 2.69
3229 3270 3.754850 ACACGGATTTAGCAAACTAACCC 59.245 43.478 0.00 0.00 38.11 4.11
3248 3289 2.092211 CGAGGCTAATCAACGTGAACAC 59.908 50.000 0.00 0.00 0.00 3.32
3266 3307 1.447838 CCGTTGGACCATCACCGAG 60.448 63.158 0.00 0.00 0.00 4.63
3342 3383 5.476945 GGAGGCTTTGGAGATTTCAAAACTA 59.523 40.000 0.00 0.00 34.26 2.24
3350 3391 3.102204 CCATTGGAGGCTTTGGAGATTT 58.898 45.455 0.00 0.00 0.00 2.17
3364 3405 3.278574 CCTTCTTCGCATTACCATTGGA 58.721 45.455 10.37 0.00 0.00 3.53
3410 3451 0.518636 CCTGAGGTGTTGATGTTGCG 59.481 55.000 0.00 0.00 0.00 4.85
3443 3490 5.362430 AGGGAGAGAACTCTTACACATGATC 59.638 44.000 0.00 0.00 40.61 2.92
3491 3538 0.544595 GGCCATCCCCTCGTATAGGT 60.545 60.000 0.00 0.00 44.90 3.08
3501 3548 1.371558 GATAGTGTCGGCCATCCCC 59.628 63.158 2.24 0.00 0.00 4.81
3539 3589 2.012673 GTAAGCTGAGGATGCCAAGTG 58.987 52.381 0.00 0.00 0.00 3.16
3553 3603 7.792032 TGCCTTCAAACTATGTATAGTAAGCT 58.208 34.615 5.06 0.00 42.47 3.74
3560 3610 7.715249 GGAAGTGATGCCTTCAAACTATGTATA 59.285 37.037 3.62 0.00 42.14 1.47
3565 3615 4.702131 GTGGAAGTGATGCCTTCAAACTAT 59.298 41.667 3.62 0.00 42.14 2.12
3571 3621 0.321564 CCGTGGAAGTGATGCCTTCA 60.322 55.000 3.62 0.00 42.14 3.02
3577 3627 2.094026 TCTCATGACCGTGGAAGTGATG 60.094 50.000 0.00 0.00 31.03 3.07
3586 3636 5.049886 CCAAATGATATGTCTCATGACCGTG 60.050 44.000 0.00 0.00 42.28 4.94
3637 3687 8.932791 ACACTCTATTTTGATAGTTTAACCACG 58.067 33.333 0.00 0.00 0.00 4.94
3640 3690 9.444600 TCCACACTCTATTTTGATAGTTTAACC 57.555 33.333 0.00 0.00 0.00 2.85
3687 3737 0.251341 ACCACAATCTGGCCAACCTC 60.251 55.000 7.01 0.00 45.32 3.85
3698 3748 2.290641 ACAACTTGCGAAGACCACAATC 59.709 45.455 3.37 0.00 0.00 2.67
3701 3751 1.013596 CACAACTTGCGAAGACCACA 58.986 50.000 3.37 0.00 0.00 4.17
3716 3766 2.203280 CAGTTCCCACCCGCACAA 60.203 61.111 0.00 0.00 0.00 3.33
3718 3768 3.901797 CTCCAGTTCCCACCCGCAC 62.902 68.421 0.00 0.00 0.00 5.34
3725 3775 1.573108 GAGGTGATCTCCAGTTCCCA 58.427 55.000 15.93 0.00 36.52 4.37
3756 3815 8.238631 CCATGGACCAAAAATGAATGAAAAATC 58.761 33.333 5.56 0.00 0.00 2.17
3769 3828 3.216187 TCTCGAACCATGGACCAAAAA 57.784 42.857 21.47 0.00 0.00 1.94
3776 3835 1.285280 ACCCAATCTCGAACCATGGA 58.715 50.000 21.47 0.00 32.82 3.41
3784 3843 0.609151 TTACGCCAACCCAATCTCGA 59.391 50.000 0.00 0.00 0.00 4.04
3785 3844 1.663695 ATTACGCCAACCCAATCTCG 58.336 50.000 0.00 0.00 0.00 4.04
3786 3845 5.767816 ATTAATTACGCCAACCCAATCTC 57.232 39.130 0.00 0.00 0.00 2.75
3787 3846 5.891551 AGAATTAATTACGCCAACCCAATCT 59.108 36.000 0.00 0.00 0.00 2.40
3788 3847 6.144078 AGAATTAATTACGCCAACCCAATC 57.856 37.500 0.00 0.00 0.00 2.67
3789 3848 7.255801 CCATAGAATTAATTACGCCAACCCAAT 60.256 37.037 0.00 0.00 0.00 3.16
3801 3860 7.721842 TGAATCCGCCAACCATAGAATTAATTA 59.278 33.333 0.00 0.00 0.00 1.40
3820 3879 7.095695 ACACCCTTAACATAAAATGAATCCG 57.904 36.000 0.00 0.00 0.00 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.