Multiple sequence alignment - TraesCS3B01G169200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G169200 chr3B 100.000 5790 0 0 1 5790 169621854 169627643 0.000000e+00 10693.0
1 TraesCS3B01G169200 chr3D 95.196 4913 108 53 392 5248 116036029 116040869 0.000000e+00 7648.0
2 TraesCS3B01G169200 chr3D 87.395 238 26 3 22 255 116035566 116035803 2.660000e-68 270.0
3 TraesCS3B01G169200 chr3D 91.379 116 10 0 5298 5413 116040986 116041101 6.010000e-35 159.0
4 TraesCS3B01G169200 chr3A 90.558 5338 312 94 1 5248 112950463 112955698 0.000000e+00 6889.0
5 TraesCS3B01G169200 chr1B 81.132 106 19 1 273 377 121347200 121347305 3.720000e-12 84.2
6 TraesCS3B01G169200 chr1B 78.899 109 22 1 273 381 121284451 121284558 8.050000e-09 73.1
7 TraesCS3B01G169200 chr7D 80.952 105 17 3 309 413 239882361 239882260 4.810000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G169200 chr3B 169621854 169627643 5789 False 10693.000000 10693 100.000000 1 5790 1 chr3B.!!$F1 5789
1 TraesCS3B01G169200 chr3D 116035566 116041101 5535 False 2692.333333 7648 91.323333 22 5413 3 chr3D.!!$F1 5391
2 TraesCS3B01G169200 chr3A 112950463 112955698 5235 False 6889.000000 6889 90.558000 1 5248 1 chr3A.!!$F1 5247

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
891 1053 1.651240 TTCGTCCATCGGTCTCGTCC 61.651 60.0 0.0 0.00 40.32 4.79 F
1136 1302 0.393944 ACGAGAGACCGATGGTAGCA 60.394 55.0 0.0 0.00 35.25 3.49 F
2775 2953 0.036590 TGCAGTCCATAGCAAGTGCA 59.963 50.0 6.0 0.95 46.64 4.57 F
3153 3334 1.103398 CAATAGCCCCCTGGAAAGCG 61.103 60.0 0.0 0.00 0.00 4.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1798 1972 1.421646 ACCAGAAAGGCTGTAAGTGCT 59.578 47.619 0.0 0.0 43.33 4.40 R
3026 3207 2.163412 GTCCAAATGCCATACTTCGCAA 59.837 45.455 0.0 0.0 38.75 4.85 R
3987 4191 0.975135 ATGATCCTCATCCTCGCAGG 59.025 55.000 0.0 0.0 29.59 4.85 R
5079 5317 0.249031 GCACCAGGCACTTGTTTGAC 60.249 55.000 0.0 0.0 43.97 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 8.822652 AAATCTTCTTTTGAAAATGCACTAGG 57.177 30.769 0.00 0.00 38.07 3.02
44 45 5.772521 TCTTCTTTTGAAAATGCACTAGGC 58.227 37.500 0.00 0.00 39.65 3.93
46 47 5.125100 TCTTTTGAAAATGCACTAGGCTG 57.875 39.130 0.00 0.00 45.15 4.85
89 93 4.776837 TCAATATGGAAAAAGCCACATGGT 59.223 37.500 0.00 0.00 41.56 3.55
203 210 6.753744 AGTTGCTTTGTCTTGAATCAAACTTC 59.246 34.615 0.00 0.00 31.59 3.01
828 985 4.394712 AGAAACGCCCGCCCTGAG 62.395 66.667 0.00 0.00 0.00 3.35
891 1053 1.651240 TTCGTCCATCGGTCTCGTCC 61.651 60.000 0.00 0.00 40.32 4.79
926 1088 3.847602 CTGCCCCGCTCTGAGAGG 61.848 72.222 19.23 19.23 34.70 3.69
1047 1213 0.671472 TGCTCTTCGTCCTCGTCGTA 60.671 55.000 0.00 0.00 38.33 3.43
1136 1302 0.393944 ACGAGAGACCGATGGTAGCA 60.394 55.000 0.00 0.00 35.25 3.49
1156 1322 1.238439 CTCGATTTGTGGTTGTGCCT 58.762 50.000 0.00 0.00 38.35 4.75
1180 1346 0.611618 TGATTCATGGGTGTGGTGCC 60.612 55.000 0.00 0.00 0.00 5.01
1184 1350 1.304299 CATGGGTGTGGTGCCATCA 60.304 57.895 0.00 0.00 0.00 3.07
1424 1597 3.789224 GCCGAATTTTGTAATTGCCTACG 59.211 43.478 0.00 0.00 34.16 3.51
1470 1643 8.470002 GCCAGATTTATGTCAGGAAATAGTTTT 58.530 33.333 0.00 0.00 0.00 2.43
1488 1662 8.797266 ATAGTTTTCTTTCCACGTTGAAATTC 57.203 30.769 14.44 5.15 33.98 2.17
1528 1702 6.745159 TTTGTGCCAATACGATTAGCTAAA 57.255 33.333 10.85 0.00 0.00 1.85
1813 1987 2.749621 GCATGTAGCACTTACAGCCTTT 59.250 45.455 0.00 0.00 45.05 3.11
2073 2250 4.027724 GCGCAAAATGTTCTTTTGTTTGG 58.972 39.130 0.30 2.29 40.47 3.28
2103 2281 2.485903 TGTGAATACGTGTGTTGGGTC 58.514 47.619 0.00 0.00 0.00 4.46
2775 2953 0.036590 TGCAGTCCATAGCAAGTGCA 59.963 50.000 6.00 0.95 46.64 4.57
3153 3334 1.103398 CAATAGCCCCCTGGAAAGCG 61.103 60.000 0.00 0.00 0.00 4.68
3357 3538 9.515226 TGCACCAGATATTCTTACTTTAAAACT 57.485 29.630 0.00 0.00 0.00 2.66
3987 4191 1.066858 TGTTTGAGGATCTCGACTGGC 60.067 52.381 0.00 0.00 34.92 4.85
4115 4319 3.832615 ATGACAGATGACTATGCTGCA 57.167 42.857 4.13 4.13 33.03 4.41
4173 4381 2.429250 TCTGAAACACGGAGTTCAGTGA 59.571 45.455 17.23 0.00 41.61 3.41
4220 4428 9.997482 CTACCACATTATAATTAACACAACCAC 57.003 33.333 0.00 0.00 0.00 4.16
4274 4482 3.305267 CGATGTTGGCATGTGGAAAGAAA 60.305 43.478 0.00 0.00 35.07 2.52
4418 4629 0.251297 TGAACCAGGTGGCCATGAAG 60.251 55.000 9.72 0.73 39.32 3.02
4502 4714 3.067833 TCCGACAACATTGCATCGTTAA 58.932 40.909 4.61 0.00 32.70 2.01
4585 4797 2.368105 GCTCGTCGACACTGTGCTG 61.368 63.158 17.16 0.28 0.00 4.41
4796 5008 6.264970 GTCCATAAAGTCGACCTAGTAGGATT 59.735 42.308 23.50 0.40 37.67 3.01
4797 5009 6.264744 TCCATAAAGTCGACCTAGTAGGATTG 59.735 42.308 23.50 11.34 37.67 2.67
4798 5010 4.388378 AAAGTCGACCTAGTAGGATTGC 57.612 45.455 23.50 9.81 37.67 3.56
4799 5011 3.300239 AGTCGACCTAGTAGGATTGCT 57.700 47.619 23.50 11.78 37.67 3.91
4800 5012 2.952978 AGTCGACCTAGTAGGATTGCTG 59.047 50.000 23.50 5.64 37.67 4.41
4801 5013 1.681793 TCGACCTAGTAGGATTGCTGC 59.318 52.381 23.50 0.00 37.67 5.25
4802 5014 1.683917 CGACCTAGTAGGATTGCTGCT 59.316 52.381 23.50 0.93 37.67 4.24
4803 5015 2.544694 CGACCTAGTAGGATTGCTGCTG 60.545 54.545 23.50 0.00 37.67 4.41
4804 5016 1.139853 ACCTAGTAGGATTGCTGCTGC 59.860 52.381 23.50 8.89 37.67 5.25
4805 5017 1.415659 CCTAGTAGGATTGCTGCTGCT 59.584 52.381 11.09 0.00 37.67 4.24
4879 5102 1.810412 GCCGTGTAACATCATCCCTCC 60.810 57.143 0.00 0.00 35.74 4.30
4917 5140 4.624336 TTCGCTGTAAACTTTTGCTGAA 57.376 36.364 1.74 0.00 0.00 3.02
4957 5180 5.306678 TGCAGGGAAAAAGGTTGTAAATGAT 59.693 36.000 0.00 0.00 0.00 2.45
4989 5221 4.625972 CAGCTAATGCACATGTTGATCA 57.374 40.909 0.00 0.00 42.74 2.92
4990 5222 5.183014 CAGCTAATGCACATGTTGATCAT 57.817 39.130 0.00 0.00 42.74 2.45
4991 5223 5.588240 CAGCTAATGCACATGTTGATCATT 58.412 37.500 0.00 6.62 42.74 2.57
5019 5251 5.799213 CTCAAGATGAGGGAATACCATACC 58.201 45.833 0.00 0.00 40.71 2.73
5020 5252 5.223655 TCAAGATGAGGGAATACCATACCA 58.776 41.667 0.00 0.00 43.89 3.25
5021 5253 5.851693 TCAAGATGAGGGAATACCATACCAT 59.148 40.000 0.00 0.00 43.89 3.55
5041 5278 4.284490 CCATGGGCATGTAGTACTGAGTAT 59.716 45.833 5.39 0.00 37.11 2.12
5103 5341 0.250467 ACAAGTGCCTGGTGCTACTG 60.250 55.000 0.00 0.00 42.00 2.74
5112 5350 1.210478 CTGGTGCTACTGCCTACCATT 59.790 52.381 0.00 0.00 42.10 3.16
5143 5382 8.405531 TCTTCAGTTTTTAGTTTCTGAACATGG 58.594 33.333 0.00 0.00 40.46 3.66
5146 5385 6.418819 CAGTTTTTAGTTTCTGAACATGGCAG 59.581 38.462 10.59 10.59 38.26 4.85
5150 5389 1.068055 GTTTCTGAACATGGCAGCTGG 60.068 52.381 17.12 0.31 35.79 4.85
5160 5399 1.042003 TGGCAGCTGGTTCAAAAGCA 61.042 50.000 17.12 0.00 42.06 3.91
5164 5403 2.546373 GCAGCTGGTTCAAAAGCATTGA 60.546 45.455 17.12 1.23 42.06 2.57
5167 5406 2.997986 GCTGGTTCAAAAGCATTGATGG 59.002 45.455 5.88 0.18 39.31 3.51
5191 5430 6.602009 GGTAAACTAGGTCTAACCAATGCATT 59.398 38.462 5.99 5.99 41.95 3.56
5194 5433 6.308015 ACTAGGTCTAACCAATGCATTGTA 57.692 37.500 31.87 20.16 41.95 2.41
5195 5434 6.113411 ACTAGGTCTAACCAATGCATTGTAC 58.887 40.000 31.87 21.51 41.95 2.90
5196 5435 5.179452 AGGTCTAACCAATGCATTGTACT 57.821 39.130 31.87 20.11 41.95 2.73
5197 5436 5.186198 AGGTCTAACCAATGCATTGTACTC 58.814 41.667 31.87 18.50 41.95 2.59
5198 5437 4.335594 GGTCTAACCAATGCATTGTACTCC 59.664 45.833 31.87 22.25 38.42 3.85
5200 5439 6.346096 GTCTAACCAATGCATTGTACTCCTA 58.654 40.000 31.87 15.33 36.06 2.94
5202 5441 8.148351 GTCTAACCAATGCATTGTACTCCTATA 58.852 37.037 31.87 14.60 36.06 1.31
5203 5442 8.710239 TCTAACCAATGCATTGTACTCCTATAA 58.290 33.333 31.87 9.06 36.06 0.98
5204 5443 7.807977 AACCAATGCATTGTACTCCTATAAG 57.192 36.000 31.87 17.34 36.06 1.73
5205 5444 6.900194 ACCAATGCATTGTACTCCTATAAGT 58.100 36.000 31.87 17.90 36.06 2.24
5207 5446 7.834181 ACCAATGCATTGTACTCCTATAAGTTT 59.166 33.333 31.87 1.09 36.06 2.66
5208 5447 8.345565 CCAATGCATTGTACTCCTATAAGTTTC 58.654 37.037 31.87 0.00 36.06 2.78
5209 5448 8.345565 CAATGCATTGTACTCCTATAAGTTTCC 58.654 37.037 27.81 0.00 33.22 3.13
5210 5449 6.354130 TGCATTGTACTCCTATAAGTTTCCC 58.646 40.000 0.00 0.00 0.00 3.97
5214 5453 6.494666 TGTACTCCTATAAGTTTCCCATGG 57.505 41.667 4.14 4.14 0.00 3.66
5229 5468 3.134985 TCCCATGGCAATTCATCCATTTG 59.865 43.478 6.09 0.00 40.88 2.32
5244 5483 8.961294 TCATCCATTTGAAACATGTTCTTTTT 57.039 26.923 12.39 0.00 0.00 1.94
5245 5484 9.044150 TCATCCATTTGAAACATGTTCTTTTTC 57.956 29.630 12.39 5.91 0.00 2.29
5246 5485 9.048446 CATCCATTTGAAACATGTTCTTTTTCT 57.952 29.630 12.39 0.00 31.68 2.52
5247 5486 9.617523 ATCCATTTGAAACATGTTCTTTTTCTT 57.382 25.926 12.39 0.00 31.68 2.52
5248 5487 9.097257 TCCATTTGAAACATGTTCTTTTTCTTC 57.903 29.630 12.39 3.64 31.68 2.87
5249 5488 9.101655 CCATTTGAAACATGTTCTTTTTCTTCT 57.898 29.630 12.39 0.00 31.68 2.85
5296 5535 2.175878 TTTCTTGCCTGTCTCTCTGC 57.824 50.000 0.00 0.00 0.00 4.26
5298 5537 2.222227 TCTTGCCTGTCTCTCTGCTA 57.778 50.000 0.00 0.00 0.00 3.49
5337 5678 8.106247 TCAGGTGTTATTTTTAACCTAGCTTG 57.894 34.615 0.00 0.00 41.14 4.01
5389 5730 1.002624 ATGGCCTACAACCACACCG 60.003 57.895 3.32 0.00 40.82 4.94
5401 5742 3.426787 ACCACACCGAATTGGACATTA 57.573 42.857 0.00 0.00 42.00 1.90
5403 5744 4.145807 ACCACACCGAATTGGACATTAAA 58.854 39.130 0.00 0.00 42.00 1.52
5413 5754 5.543507 ATTGGACATTAAAGTGTGGCAAA 57.456 34.783 0.00 0.00 31.16 3.68
5414 5755 5.344743 TTGGACATTAAAGTGTGGCAAAA 57.655 34.783 0.00 0.00 31.16 2.44
5415 5756 5.344743 TGGACATTAAAGTGTGGCAAAAA 57.655 34.783 0.00 0.00 31.16 1.94
5443 5784 9.783256 AAATGATACTAACCAAAAATTAGCGTC 57.217 29.630 0.00 0.00 33.66 5.19
5444 5785 6.996106 TGATACTAACCAAAAATTAGCGTCG 58.004 36.000 0.00 0.00 33.66 5.12
5445 5786 6.812656 TGATACTAACCAAAAATTAGCGTCGA 59.187 34.615 0.00 0.00 33.66 4.20
5446 5787 5.927954 ACTAACCAAAAATTAGCGTCGAA 57.072 34.783 0.00 0.00 33.66 3.71
5447 5788 5.682869 ACTAACCAAAAATTAGCGTCGAAC 58.317 37.500 0.00 0.00 33.66 3.95
5448 5789 4.823790 AACCAAAAATTAGCGTCGAACT 57.176 36.364 0.00 0.00 0.00 3.01
5449 5790 4.823790 ACCAAAAATTAGCGTCGAACTT 57.176 36.364 0.00 0.00 0.00 2.66
5450 5791 5.927954 ACCAAAAATTAGCGTCGAACTTA 57.072 34.783 0.00 0.00 0.00 2.24
5451 5792 6.490566 ACCAAAAATTAGCGTCGAACTTAT 57.509 33.333 0.00 0.00 0.00 1.73
5452 5793 6.311723 ACCAAAAATTAGCGTCGAACTTATG 58.688 36.000 0.00 0.00 0.00 1.90
5453 5794 6.072893 ACCAAAAATTAGCGTCGAACTTATGT 60.073 34.615 0.00 0.00 0.00 2.29
5454 5795 6.464834 CCAAAAATTAGCGTCGAACTTATGTC 59.535 38.462 0.00 0.00 0.00 3.06
5455 5796 5.713822 AAATTAGCGTCGAACTTATGTCC 57.286 39.130 0.00 0.00 0.00 4.02
5456 5797 3.853831 TTAGCGTCGAACTTATGTCCA 57.146 42.857 0.00 0.00 0.00 4.02
5457 5798 2.736144 AGCGTCGAACTTATGTCCAA 57.264 45.000 0.00 0.00 0.00 3.53
5458 5799 3.247006 AGCGTCGAACTTATGTCCAAT 57.753 42.857 0.00 0.00 0.00 3.16
5459 5800 3.187700 AGCGTCGAACTTATGTCCAATC 58.812 45.455 0.00 0.00 0.00 2.67
5460 5801 2.034842 GCGTCGAACTTATGTCCAATCG 60.035 50.000 0.00 0.00 0.00 3.34
5461 5802 3.431856 CGTCGAACTTATGTCCAATCGA 58.568 45.455 0.00 0.00 37.02 3.59
5462 5803 4.042398 CGTCGAACTTATGTCCAATCGAT 58.958 43.478 0.00 0.00 40.80 3.59
5463 5804 4.085568 CGTCGAACTTATGTCCAATCGATG 60.086 45.833 0.00 7.23 40.80 3.84
5464 5805 5.041287 GTCGAACTTATGTCCAATCGATGA 58.959 41.667 0.00 0.00 40.80 2.92
5465 5806 5.174035 GTCGAACTTATGTCCAATCGATGAG 59.826 44.000 0.00 0.00 40.80 2.90
5466 5807 5.043903 CGAACTTATGTCCAATCGATGAGT 58.956 41.667 0.00 0.00 32.38 3.41
5467 5808 6.038936 TCGAACTTATGTCCAATCGATGAGTA 59.961 38.462 0.00 0.00 34.74 2.59
5468 5809 6.863645 CGAACTTATGTCCAATCGATGAGTAT 59.136 38.462 0.00 0.00 32.38 2.12
5469 5810 7.061210 CGAACTTATGTCCAATCGATGAGTATC 59.939 40.741 0.00 0.00 32.38 2.24
5470 5811 7.531857 ACTTATGTCCAATCGATGAGTATCT 57.468 36.000 0.00 0.00 34.92 1.98
5471 5812 7.957002 ACTTATGTCCAATCGATGAGTATCTT 58.043 34.615 0.00 0.00 34.92 2.40
5472 5813 8.424918 ACTTATGTCCAATCGATGAGTATCTTT 58.575 33.333 0.00 0.00 34.92 2.52
5473 5814 8.593492 TTATGTCCAATCGATGAGTATCTTTG 57.407 34.615 0.00 0.00 34.92 2.77
5474 5815 6.220726 TGTCCAATCGATGAGTATCTTTGA 57.779 37.500 0.00 0.00 37.12 2.69
5475 5816 6.820335 TGTCCAATCGATGAGTATCTTTGAT 58.180 36.000 0.00 0.00 43.11 2.57
5476 5817 6.703165 TGTCCAATCGATGAGTATCTTTGATG 59.297 38.462 0.00 0.00 41.14 3.07
5477 5818 6.703607 GTCCAATCGATGAGTATCTTTGATGT 59.296 38.462 0.00 0.00 41.14 3.06
5478 5819 6.925718 TCCAATCGATGAGTATCTTTGATGTC 59.074 38.462 0.00 0.00 41.14 3.06
5479 5820 6.703165 CCAATCGATGAGTATCTTTGATGTCA 59.297 38.462 0.00 0.00 41.14 3.58
5480 5821 7.307042 CCAATCGATGAGTATCTTTGATGTCAC 60.307 40.741 0.00 0.00 41.14 3.67
5481 5822 6.207691 TCGATGAGTATCTTTGATGTCACA 57.792 37.500 0.00 0.00 34.92 3.58
5482 5823 6.268566 TCGATGAGTATCTTTGATGTCACAG 58.731 40.000 0.00 0.00 34.92 3.66
5483 5824 5.051173 CGATGAGTATCTTTGATGTCACAGC 60.051 44.000 0.00 0.00 34.92 4.40
5484 5825 4.507710 TGAGTATCTTTGATGTCACAGCC 58.492 43.478 0.00 0.00 34.92 4.85
5485 5826 4.020307 TGAGTATCTTTGATGTCACAGCCA 60.020 41.667 0.00 0.00 34.92 4.75
5486 5827 4.511527 AGTATCTTTGATGTCACAGCCAG 58.488 43.478 0.00 0.00 0.00 4.85
5487 5828 2.189594 TCTTTGATGTCACAGCCAGG 57.810 50.000 0.00 0.00 0.00 4.45
5488 5829 0.524862 CTTTGATGTCACAGCCAGGC 59.475 55.000 1.84 1.84 0.00 4.85
5489 5830 0.178995 TTTGATGTCACAGCCAGGCA 60.179 50.000 15.80 0.00 0.00 4.75
5490 5831 0.607217 TTGATGTCACAGCCAGGCAG 60.607 55.000 15.80 8.60 0.00 4.85
5491 5832 1.002868 GATGTCACAGCCAGGCAGT 60.003 57.895 15.80 9.44 0.00 4.40
5492 5833 0.250234 GATGTCACAGCCAGGCAGTA 59.750 55.000 15.80 0.00 0.00 2.74
5493 5834 0.692476 ATGTCACAGCCAGGCAGTAA 59.308 50.000 15.80 0.00 0.00 2.24
5494 5835 0.692476 TGTCACAGCCAGGCAGTAAT 59.308 50.000 15.80 0.00 0.00 1.89
5495 5836 1.089920 GTCACAGCCAGGCAGTAATG 58.910 55.000 15.80 4.99 0.00 1.90
5496 5837 0.035152 TCACAGCCAGGCAGTAATGG 60.035 55.000 15.80 0.00 39.73 3.16
5497 5838 0.322816 CACAGCCAGGCAGTAATGGT 60.323 55.000 15.80 0.00 38.91 3.55
5498 5839 0.322816 ACAGCCAGGCAGTAATGGTG 60.323 55.000 15.80 2.50 38.91 4.17
5499 5840 0.035152 CAGCCAGGCAGTAATGGTGA 60.035 55.000 15.80 0.00 38.91 4.02
5500 5841 0.698238 AGCCAGGCAGTAATGGTGAA 59.302 50.000 15.80 0.00 38.91 3.18
5501 5842 1.075374 AGCCAGGCAGTAATGGTGAAA 59.925 47.619 15.80 0.00 38.91 2.69
5502 5843 1.474077 GCCAGGCAGTAATGGTGAAAG 59.526 52.381 6.55 0.00 38.91 2.62
5503 5844 2.879756 GCCAGGCAGTAATGGTGAAAGA 60.880 50.000 6.55 0.00 38.91 2.52
5504 5845 3.420893 CCAGGCAGTAATGGTGAAAGAA 58.579 45.455 0.00 0.00 0.00 2.52
5505 5846 3.826157 CCAGGCAGTAATGGTGAAAGAAA 59.174 43.478 0.00 0.00 0.00 2.52
5506 5847 4.463891 CCAGGCAGTAATGGTGAAAGAAAT 59.536 41.667 0.00 0.00 0.00 2.17
5507 5848 5.047092 CCAGGCAGTAATGGTGAAAGAAATT 60.047 40.000 0.00 0.00 0.00 1.82
5508 5849 6.458210 CAGGCAGTAATGGTGAAAGAAATTT 58.542 36.000 0.00 0.00 0.00 1.82
5509 5850 6.930722 CAGGCAGTAATGGTGAAAGAAATTTT 59.069 34.615 0.00 0.00 0.00 1.82
5510 5851 6.930722 AGGCAGTAATGGTGAAAGAAATTTTG 59.069 34.615 0.00 0.00 0.00 2.44
5511 5852 6.347644 GGCAGTAATGGTGAAAGAAATTTTGC 60.348 38.462 0.00 0.00 0.00 3.68
5512 5853 6.616260 GCAGTAATGGTGAAAGAAATTTTGCG 60.616 38.462 0.00 0.00 0.00 4.85
5513 5854 4.730600 AATGGTGAAAGAAATTTTGCGC 57.269 36.364 0.00 0.00 0.00 6.09
5514 5855 2.123342 TGGTGAAAGAAATTTTGCGCG 58.877 42.857 0.00 0.00 0.00 6.86
5515 5856 1.455408 GGTGAAAGAAATTTTGCGCGG 59.545 47.619 8.83 0.00 0.00 6.46
5516 5857 2.124122 GTGAAAGAAATTTTGCGCGGT 58.876 42.857 8.83 0.00 0.00 5.68
5517 5858 2.153057 GTGAAAGAAATTTTGCGCGGTC 59.847 45.455 8.83 0.00 0.00 4.79
5518 5859 1.382088 GAAAGAAATTTTGCGCGGTCG 59.618 47.619 8.83 0.00 39.07 4.79
5519 5860 0.589223 AAGAAATTTTGCGCGGTCGA 59.411 45.000 8.83 0.00 38.10 4.20
5520 5861 0.110373 AGAAATTTTGCGCGGTCGAC 60.110 50.000 8.83 7.13 38.10 4.20
5521 5862 0.384974 GAAATTTTGCGCGGTCGACA 60.385 50.000 18.91 0.00 38.10 4.35
5522 5863 0.659123 AAATTTTGCGCGGTCGACAC 60.659 50.000 18.91 7.85 38.10 3.67
5523 5864 2.757946 AATTTTGCGCGGTCGACACG 62.758 55.000 21.62 21.62 38.10 4.49
5528 5869 4.771356 CGCGGTCGACACGTGGAT 62.771 66.667 21.57 0.00 38.11 3.41
5529 5870 2.431942 GCGGTCGACACGTGGATT 60.432 61.111 21.57 0.00 0.00 3.01
5530 5871 2.025418 GCGGTCGACACGTGGATTT 61.025 57.895 21.57 0.00 0.00 2.17
5531 5872 0.733566 GCGGTCGACACGTGGATTTA 60.734 55.000 21.57 0.00 0.00 1.40
5532 5873 1.265568 CGGTCGACACGTGGATTTAG 58.734 55.000 21.57 3.19 0.00 1.85
5533 5874 0.997196 GGTCGACACGTGGATTTAGC 59.003 55.000 21.57 6.31 0.00 3.09
5534 5875 1.403780 GGTCGACACGTGGATTTAGCT 60.404 52.381 21.57 0.00 0.00 3.32
5535 5876 1.654105 GTCGACACGTGGATTTAGCTG 59.346 52.381 21.57 0.00 0.00 4.24
5536 5877 0.999406 CGACACGTGGATTTAGCTGG 59.001 55.000 21.57 0.00 0.00 4.85
5537 5878 0.727398 GACACGTGGATTTAGCTGGC 59.273 55.000 21.57 0.00 0.00 4.85
5538 5879 0.324943 ACACGTGGATTTAGCTGGCT 59.675 50.000 21.57 0.00 0.00 4.75
5539 5880 1.553248 ACACGTGGATTTAGCTGGCTA 59.447 47.619 21.57 0.00 0.00 3.93
5540 5881 2.027561 ACACGTGGATTTAGCTGGCTAA 60.028 45.455 21.57 10.53 36.81 3.09
5541 5882 2.351726 CACGTGGATTTAGCTGGCTAAC 59.648 50.000 13.70 4.83 38.14 2.34
5542 5883 1.940613 CGTGGATTTAGCTGGCTAACC 59.059 52.381 13.70 12.90 38.14 2.85
5543 5884 1.940613 GTGGATTTAGCTGGCTAACCG 59.059 52.381 13.70 0.00 38.14 4.44
5544 5885 1.557832 TGGATTTAGCTGGCTAACCGT 59.442 47.619 13.70 4.62 38.14 4.83
5545 5886 2.767394 TGGATTTAGCTGGCTAACCGTA 59.233 45.455 13.70 1.42 38.14 4.02
5546 5887 3.129109 GGATTTAGCTGGCTAACCGTAC 58.871 50.000 13.70 2.30 38.14 3.67
5547 5888 3.431207 GGATTTAGCTGGCTAACCGTACA 60.431 47.826 13.70 0.43 38.14 2.90
5548 5889 2.660189 TTAGCTGGCTAACCGTACAC 57.340 50.000 10.53 0.00 39.70 2.90
5549 5890 0.452987 TAGCTGGCTAACCGTACACG 59.547 55.000 0.00 0.00 39.70 4.49
5550 5891 1.080298 GCTGGCTAACCGTACACGT 60.080 57.895 0.58 0.00 39.70 4.49
5551 5892 1.349259 GCTGGCTAACCGTACACGTG 61.349 60.000 15.48 15.48 39.70 4.49
5552 5893 0.038892 CTGGCTAACCGTACACGTGT 60.039 55.000 26.52 26.52 39.70 4.49
5553 5894 0.318869 TGGCTAACCGTACACGTGTG 60.319 55.000 30.83 16.77 39.70 3.82
5554 5895 1.620413 GGCTAACCGTACACGTGTGC 61.620 60.000 30.83 27.66 37.74 4.57
5555 5896 1.620413 GCTAACCGTACACGTGTGCC 61.620 60.000 30.83 19.12 37.74 5.01
5556 5897 1.339235 CTAACCGTACACGTGTGCCG 61.339 60.000 30.83 28.07 44.03 5.69
5557 5898 1.790090 TAACCGTACACGTGTGCCGA 61.790 55.000 31.37 16.83 40.70 5.54
5558 5899 2.126228 CCGTACACGTGTGCCGAT 60.126 61.111 31.37 10.96 40.70 4.18
5559 5900 2.156446 CCGTACACGTGTGCCGATC 61.156 63.158 31.37 15.68 40.70 3.69
5560 5901 1.443025 CGTACACGTGTGCCGATCA 60.443 57.895 30.83 6.18 40.70 2.92
5561 5902 1.670971 CGTACACGTGTGCCGATCAC 61.671 60.000 30.83 17.39 45.82 3.06
5568 5909 3.398920 GTGCCGATCACATGGTCG 58.601 61.111 7.58 7.58 44.98 4.79
5572 5913 3.216237 CGATCACATGGTCGGGGA 58.784 61.111 6.65 0.00 34.39 4.81
5573 5914 1.520192 CGATCACATGGTCGGGGAA 59.480 57.895 6.65 0.00 34.39 3.97
5574 5915 0.530650 CGATCACATGGTCGGGGAAG 60.531 60.000 6.65 0.00 34.39 3.46
5575 5916 0.179045 GATCACATGGTCGGGGAAGG 60.179 60.000 0.00 0.00 0.00 3.46
5576 5917 0.620410 ATCACATGGTCGGGGAAGGA 60.620 55.000 0.00 0.00 0.00 3.36
5577 5918 0.838554 TCACATGGTCGGGGAAGGAA 60.839 55.000 0.00 0.00 0.00 3.36
5578 5919 0.676782 CACATGGTCGGGGAAGGAAC 60.677 60.000 0.00 0.00 0.00 3.62
5579 5920 1.077716 CATGGTCGGGGAAGGAACC 60.078 63.158 0.00 0.00 0.00 3.62
5586 5927 4.832608 GGGAAGGAACCGCGCGAT 62.833 66.667 34.63 20.50 0.00 4.58
5587 5928 3.262686 GGAAGGAACCGCGCGATC 61.263 66.667 34.63 27.16 0.00 3.69
5588 5929 2.202756 GAAGGAACCGCGCGATCT 60.203 61.111 34.63 18.95 0.00 2.75
5589 5930 2.202756 AAGGAACCGCGCGATCTC 60.203 61.111 34.63 22.77 0.00 2.75
5590 5931 4.554363 AGGAACCGCGCGATCTCG 62.554 66.667 34.63 17.10 43.27 4.04
5591 5932 4.849329 GGAACCGCGCGATCTCGT 62.849 66.667 34.63 17.88 42.22 4.18
5592 5933 3.313257 GAACCGCGCGATCTCGTC 61.313 66.667 34.63 14.41 42.22 4.20
5593 5934 3.736482 GAACCGCGCGATCTCGTCT 62.736 63.158 34.63 10.60 42.22 4.18
5594 5935 2.370824 GAACCGCGCGATCTCGTCTA 62.371 60.000 34.63 0.00 42.22 2.59
5595 5936 2.425448 CCGCGCGATCTCGTCTAC 60.425 66.667 34.63 0.00 42.22 2.59
5596 5937 2.787725 CGCGCGATCTCGTCTACG 60.788 66.667 28.94 0.00 42.22 3.51
5597 5938 2.425448 GCGCGATCTCGTCTACGG 60.425 66.667 12.10 0.00 42.22 4.02
5598 5939 2.425448 CGCGATCTCGTCTACGGC 60.425 66.667 0.00 0.00 42.22 5.68
5599 5940 2.883468 CGCGATCTCGTCTACGGCT 61.883 63.158 0.00 0.00 42.22 5.52
5600 5941 1.369448 GCGATCTCGTCTACGGCTG 60.369 63.158 2.24 0.00 42.22 4.85
5601 5942 1.773054 GCGATCTCGTCTACGGCTGA 61.773 60.000 0.00 0.14 42.22 4.26
5602 5943 0.656259 CGATCTCGTCTACGGCTGAA 59.344 55.000 0.00 0.00 40.29 3.02
5603 5944 1.333347 CGATCTCGTCTACGGCTGAAG 60.333 57.143 0.00 0.00 40.29 3.02
5604 5945 0.382515 ATCTCGTCTACGGCTGAAGC 59.617 55.000 0.00 0.00 40.29 3.86
5605 5946 0.958876 TCTCGTCTACGGCTGAAGCA 60.959 55.000 0.00 0.00 44.36 3.91
5606 5947 0.101399 CTCGTCTACGGCTGAAGCAT 59.899 55.000 0.00 0.00 44.36 3.79
5607 5948 0.179137 TCGTCTACGGCTGAAGCATG 60.179 55.000 0.00 0.00 44.36 4.06
5608 5949 0.458543 CGTCTACGGCTGAAGCATGT 60.459 55.000 0.00 4.78 44.36 3.21
5609 5950 1.281899 GTCTACGGCTGAAGCATGTC 58.718 55.000 0.00 0.00 44.36 3.06
5610 5951 0.179137 TCTACGGCTGAAGCATGTCG 60.179 55.000 0.00 1.04 44.36 4.35
5611 5952 0.179137 CTACGGCTGAAGCATGTCGA 60.179 55.000 0.00 0.00 44.36 4.20
5612 5953 0.459899 TACGGCTGAAGCATGTCGAT 59.540 50.000 0.00 0.00 44.36 3.59
5613 5954 0.391661 ACGGCTGAAGCATGTCGATT 60.392 50.000 0.00 0.00 44.36 3.34
5614 5955 0.302890 CGGCTGAAGCATGTCGATTC 59.697 55.000 4.43 0.00 44.36 2.52
5615 5956 1.661341 GGCTGAAGCATGTCGATTCT 58.339 50.000 4.43 0.00 40.79 2.40
5616 5957 1.329906 GGCTGAAGCATGTCGATTCTG 59.670 52.381 4.43 0.00 40.79 3.02
5617 5958 2.005451 GCTGAAGCATGTCGATTCTGT 58.995 47.619 0.00 0.00 40.79 3.41
5618 5959 2.417933 GCTGAAGCATGTCGATTCTGTT 59.582 45.455 0.00 0.00 40.79 3.16
5619 5960 3.727079 GCTGAAGCATGTCGATTCTGTTG 60.727 47.826 0.00 0.00 40.79 3.33
5620 5961 3.663025 TGAAGCATGTCGATTCTGTTGA 58.337 40.909 0.00 0.00 40.79 3.18
5621 5962 3.433274 TGAAGCATGTCGATTCTGTTGAC 59.567 43.478 0.00 0.00 40.79 3.18
5622 5963 1.995484 AGCATGTCGATTCTGTTGACG 59.005 47.619 0.00 0.00 43.14 4.35
5623 5964 1.061131 GCATGTCGATTCTGTTGACGG 59.939 52.381 0.00 0.00 43.14 4.79
5624 5965 2.606108 CATGTCGATTCTGTTGACGGA 58.394 47.619 0.00 0.00 43.14 4.69
5625 5966 3.190079 CATGTCGATTCTGTTGACGGAT 58.810 45.455 0.00 0.00 43.14 4.18
5626 5967 4.359706 CATGTCGATTCTGTTGACGGATA 58.640 43.478 0.00 0.00 43.14 2.59
5627 5968 4.649088 TGTCGATTCTGTTGACGGATAT 57.351 40.909 0.00 0.00 43.14 1.63
5628 5969 5.761165 TGTCGATTCTGTTGACGGATATA 57.239 39.130 0.00 0.00 43.14 0.86
5629 5970 6.327279 TGTCGATTCTGTTGACGGATATAT 57.673 37.500 0.00 0.00 43.14 0.86
5630 5971 7.443259 TGTCGATTCTGTTGACGGATATATA 57.557 36.000 0.00 0.00 43.14 0.86
5631 5972 7.303261 TGTCGATTCTGTTGACGGATATATAC 58.697 38.462 0.00 0.00 43.14 1.47
5632 5973 6.746364 GTCGATTCTGTTGACGGATATATACC 59.254 42.308 0.00 0.00 31.74 2.73
5642 5983 3.187700 CGGATATATACCGCAGAAAGCC 58.812 50.000 9.63 0.00 43.74 4.35
5643 5984 3.368013 CGGATATATACCGCAGAAAGCCA 60.368 47.826 9.63 0.00 43.74 4.75
5644 5985 4.680708 CGGATATATACCGCAGAAAGCCAT 60.681 45.833 9.63 0.00 43.74 4.40
5645 5986 4.572389 GGATATATACCGCAGAAAGCCATG 59.428 45.833 0.00 0.00 41.38 3.66
5646 5987 2.254546 TATACCGCAGAAAGCCATGG 57.745 50.000 7.63 7.63 41.38 3.66
5647 5988 0.466189 ATACCGCAGAAAGCCATGGG 60.466 55.000 15.13 0.00 41.38 4.00
5648 5989 1.558167 TACCGCAGAAAGCCATGGGA 61.558 55.000 15.13 0.00 41.38 4.37
5649 5990 1.678635 CCGCAGAAAGCCATGGGAA 60.679 57.895 15.13 0.00 41.38 3.97
5650 5991 1.250154 CCGCAGAAAGCCATGGGAAA 61.250 55.000 15.13 0.00 41.38 3.13
5651 5992 0.171903 CGCAGAAAGCCATGGGAAAG 59.828 55.000 15.13 0.00 41.38 2.62
5652 5993 1.549203 GCAGAAAGCCATGGGAAAGA 58.451 50.000 15.13 0.00 37.23 2.52
5653 5994 1.895131 GCAGAAAGCCATGGGAAAGAA 59.105 47.619 15.13 0.00 37.23 2.52
5654 5995 2.498885 GCAGAAAGCCATGGGAAAGAAT 59.501 45.455 15.13 0.00 37.23 2.40
5655 5996 3.055602 GCAGAAAGCCATGGGAAAGAATT 60.056 43.478 15.13 0.00 37.23 2.17
5656 5997 4.501071 CAGAAAGCCATGGGAAAGAATTG 58.499 43.478 15.13 0.00 0.00 2.32
5657 5998 3.516700 AGAAAGCCATGGGAAAGAATTGG 59.483 43.478 15.13 0.00 0.00 3.16
5658 5999 3.766644 GCCATGGGAAAGAATTGGC 57.233 52.632 15.13 0.00 45.31 4.52
5659 6000 0.178767 GCCATGGGAAAGAATTGGCC 59.821 55.000 15.13 0.00 45.63 5.36
5660 6001 1.570803 CCATGGGAAAGAATTGGCCA 58.429 50.000 0.00 0.00 0.00 5.36
5661 6002 1.207811 CCATGGGAAAGAATTGGCCAC 59.792 52.381 3.88 0.00 0.00 5.01
5662 6003 1.135024 CATGGGAAAGAATTGGCCACG 60.135 52.381 3.88 0.00 0.00 4.94
5663 6004 1.215382 GGGAAAGAATTGGCCACGC 59.785 57.895 3.88 0.00 0.00 5.34
5664 6005 1.531739 GGGAAAGAATTGGCCACGCA 61.532 55.000 3.88 0.00 0.00 5.24
5665 6006 0.109132 GGAAAGAATTGGCCACGCAG 60.109 55.000 3.88 0.00 0.00 5.18
5666 6007 0.109132 GAAAGAATTGGCCACGCAGG 60.109 55.000 3.88 0.00 41.84 4.85
5667 6008 1.535204 AAAGAATTGGCCACGCAGGG 61.535 55.000 3.88 0.00 38.09 4.45
5668 6009 2.361104 GAATTGGCCACGCAGGGA 60.361 61.111 3.88 0.00 38.09 4.20
5669 6010 2.676471 AATTGGCCACGCAGGGAC 60.676 61.111 3.88 0.00 38.09 4.46
5670 6011 3.505790 AATTGGCCACGCAGGGACA 62.506 57.895 3.88 0.00 46.80 4.02
5673 6014 4.329545 GGCCACGCAGGGACAGAA 62.330 66.667 0.00 0.00 35.36 3.02
5674 6015 3.050275 GCCACGCAGGGACAGAAC 61.050 66.667 0.00 0.00 38.09 3.01
5675 6016 2.738521 CCACGCAGGGACAGAACG 60.739 66.667 0.00 0.00 0.00 3.95
5676 6017 2.738521 CACGCAGGGACAGAACGG 60.739 66.667 0.00 0.00 0.00 4.44
5677 6018 4.681978 ACGCAGGGACAGAACGGC 62.682 66.667 0.00 0.00 0.00 5.68
5678 6019 4.680237 CGCAGGGACAGAACGGCA 62.680 66.667 0.00 0.00 0.00 5.69
5679 6020 2.045926 GCAGGGACAGAACGGCAT 60.046 61.111 0.00 0.00 0.00 4.40
5680 6021 2.401766 GCAGGGACAGAACGGCATG 61.402 63.158 0.00 0.00 0.00 4.06
5681 6022 1.746615 CAGGGACAGAACGGCATGG 60.747 63.158 0.00 0.00 0.00 3.66
5682 6023 1.918293 AGGGACAGAACGGCATGGA 60.918 57.895 0.00 0.00 0.00 3.41
5683 6024 1.224592 GGGACAGAACGGCATGGAT 59.775 57.895 0.00 0.00 0.00 3.41
5684 6025 0.394352 GGGACAGAACGGCATGGATT 60.394 55.000 0.00 0.00 0.00 3.01
5685 6026 0.734889 GGACAGAACGGCATGGATTG 59.265 55.000 0.00 0.00 0.00 2.67
5686 6027 0.734889 GACAGAACGGCATGGATTGG 59.265 55.000 0.00 0.00 0.00 3.16
5687 6028 0.327924 ACAGAACGGCATGGATTGGA 59.672 50.000 0.00 0.00 0.00 3.53
5688 6029 1.064463 ACAGAACGGCATGGATTGGAT 60.064 47.619 0.00 0.00 0.00 3.41
5689 6030 1.335810 CAGAACGGCATGGATTGGATG 59.664 52.381 0.00 0.00 0.00 3.51
5690 6031 1.064463 AGAACGGCATGGATTGGATGT 60.064 47.619 0.00 0.00 0.00 3.06
5691 6032 1.066002 GAACGGCATGGATTGGATGTG 59.934 52.381 0.00 0.00 0.00 3.21
5692 6033 0.752743 ACGGCATGGATTGGATGTGG 60.753 55.000 0.00 0.00 0.00 4.17
5693 6034 1.457823 CGGCATGGATTGGATGTGGG 61.458 60.000 0.00 0.00 0.00 4.61
5694 6035 0.397535 GGCATGGATTGGATGTGGGT 60.398 55.000 0.00 0.00 0.00 4.51
5695 6036 1.488390 GCATGGATTGGATGTGGGTT 58.512 50.000 0.00 0.00 0.00 4.11
5696 6037 2.665165 GCATGGATTGGATGTGGGTTA 58.335 47.619 0.00 0.00 0.00 2.85
5697 6038 2.362077 GCATGGATTGGATGTGGGTTAC 59.638 50.000 0.00 0.00 0.00 2.50
5698 6039 2.818751 TGGATTGGATGTGGGTTACC 57.181 50.000 0.00 0.00 37.24 2.85
5699 6040 1.065053 TGGATTGGATGTGGGTTACCG 60.065 52.381 0.00 0.00 40.75 4.02
5700 6041 1.210967 GGATTGGATGTGGGTTACCGA 59.789 52.381 0.00 0.00 40.75 4.69
5701 6042 2.158667 GGATTGGATGTGGGTTACCGAT 60.159 50.000 0.00 0.00 40.75 4.18
5702 6043 3.551846 GATTGGATGTGGGTTACCGATT 58.448 45.455 0.00 0.00 40.75 3.34
5703 6044 4.445162 GGATTGGATGTGGGTTACCGATTA 60.445 45.833 0.00 0.00 40.75 1.75
5704 6045 4.571369 TTGGATGTGGGTTACCGATTAA 57.429 40.909 0.00 0.00 40.75 1.40
5705 6046 4.781775 TGGATGTGGGTTACCGATTAAT 57.218 40.909 0.00 0.00 40.75 1.40
5706 6047 4.710324 TGGATGTGGGTTACCGATTAATC 58.290 43.478 5.30 5.30 40.75 1.75
5707 6048 4.164413 TGGATGTGGGTTACCGATTAATCA 59.836 41.667 15.57 0.00 40.75 2.57
5708 6049 5.127491 GGATGTGGGTTACCGATTAATCAA 58.873 41.667 15.57 0.00 40.75 2.57
5709 6050 5.008316 GGATGTGGGTTACCGATTAATCAAC 59.992 44.000 15.57 11.41 40.75 3.18
5710 6051 4.907809 TGTGGGTTACCGATTAATCAACA 58.092 39.130 15.57 3.93 40.75 3.33
5711 6052 5.502079 TGTGGGTTACCGATTAATCAACAT 58.498 37.500 15.57 0.40 40.75 2.71
5712 6053 5.587043 TGTGGGTTACCGATTAATCAACATC 59.413 40.000 15.57 8.72 40.75 3.06
5713 6054 5.820947 GTGGGTTACCGATTAATCAACATCT 59.179 40.000 15.57 0.00 40.75 2.90
5714 6055 5.820423 TGGGTTACCGATTAATCAACATCTG 59.180 40.000 15.57 0.00 40.75 2.90
5715 6056 6.053005 GGGTTACCGATTAATCAACATCTGA 58.947 40.000 15.57 0.00 38.81 3.27
5716 6057 6.540914 GGGTTACCGATTAATCAACATCTGAA 59.459 38.462 15.57 0.00 37.67 3.02
5717 6058 7.228706 GGGTTACCGATTAATCAACATCTGAAT 59.771 37.037 15.57 0.00 37.67 2.57
5718 6059 8.070171 GGTTACCGATTAATCAACATCTGAATG 58.930 37.037 15.57 0.00 37.67 2.67
5719 6060 6.064846 ACCGATTAATCAACATCTGAATGC 57.935 37.500 15.57 0.00 37.67 3.56
5720 6061 5.142265 CCGATTAATCAACATCTGAATGCG 58.858 41.667 15.57 0.00 37.67 4.73
5721 6062 5.050159 CCGATTAATCAACATCTGAATGCGA 60.050 40.000 15.57 0.00 37.67 5.10
5722 6063 5.842843 CGATTAATCAACATCTGAATGCGAC 59.157 40.000 15.57 0.00 37.67 5.19
5723 6064 6.509997 CGATTAATCAACATCTGAATGCGACA 60.510 38.462 15.57 0.00 37.67 4.35
5724 6065 6.682423 TTAATCAACATCTGAATGCGACAT 57.318 33.333 0.00 0.00 37.67 3.06
5725 6066 4.547406 ATCAACATCTGAATGCGACATG 57.453 40.909 0.00 0.00 37.67 3.21
5726 6067 3.598299 TCAACATCTGAATGCGACATGA 58.402 40.909 0.00 0.00 36.26 3.07
5727 6068 3.619929 TCAACATCTGAATGCGACATGAG 59.380 43.478 0.00 0.00 36.26 2.90
5728 6069 3.257469 ACATCTGAATGCGACATGAGT 57.743 42.857 0.00 0.00 36.26 3.41
5729 6070 3.603532 ACATCTGAATGCGACATGAGTT 58.396 40.909 0.00 0.00 36.26 3.01
5730 6071 4.005650 ACATCTGAATGCGACATGAGTTT 58.994 39.130 0.00 0.00 36.26 2.66
5731 6072 4.093998 ACATCTGAATGCGACATGAGTTTC 59.906 41.667 0.00 2.45 36.26 2.78
5732 6073 3.663025 TCTGAATGCGACATGAGTTTCA 58.337 40.909 0.00 6.52 0.00 2.69
5733 6074 4.064388 TCTGAATGCGACATGAGTTTCAA 58.936 39.130 0.00 0.00 0.00 2.69
5734 6075 4.152938 TCTGAATGCGACATGAGTTTCAAG 59.847 41.667 0.00 3.16 0.00 3.02
5735 6076 4.064388 TGAATGCGACATGAGTTTCAAGA 58.936 39.130 0.00 0.00 0.00 3.02
5736 6077 4.514816 TGAATGCGACATGAGTTTCAAGAA 59.485 37.500 0.00 0.00 0.00 2.52
5737 6078 4.675190 ATGCGACATGAGTTTCAAGAAG 57.325 40.909 0.00 0.00 0.00 2.85
5738 6079 3.727726 TGCGACATGAGTTTCAAGAAGA 58.272 40.909 0.00 0.00 0.00 2.87
5739 6080 4.126437 TGCGACATGAGTTTCAAGAAGAA 58.874 39.130 0.00 0.00 0.00 2.52
5740 6081 4.574421 TGCGACATGAGTTTCAAGAAGAAA 59.426 37.500 0.00 0.00 43.71 2.52
5755 6096 9.950680 TTCAAGAAGAAATAAACTGAATGTGAC 57.049 29.630 0.00 0.00 32.05 3.67
5756 6097 9.119418 TCAAGAAGAAATAAACTGAATGTGACA 57.881 29.630 0.00 0.00 0.00 3.58
5757 6098 9.903682 CAAGAAGAAATAAACTGAATGTGACAT 57.096 29.630 0.00 0.00 0.00 3.06
5758 6099 9.903682 AAGAAGAAATAAACTGAATGTGACATG 57.096 29.630 0.00 0.00 0.00 3.21
5759 6100 8.517878 AGAAGAAATAAACTGAATGTGACATGG 58.482 33.333 0.00 0.00 0.00 3.66
5760 6101 6.624423 AGAAATAAACTGAATGTGACATGGC 58.376 36.000 0.00 0.00 0.00 4.40
5761 6102 2.995466 AAACTGAATGTGACATGGCG 57.005 45.000 0.00 0.00 0.00 5.69
5762 6103 2.183478 AACTGAATGTGACATGGCGA 57.817 45.000 0.00 0.00 0.00 5.54
5763 6104 1.730501 ACTGAATGTGACATGGCGAG 58.269 50.000 0.00 0.00 0.00 5.03
5764 6105 1.002430 ACTGAATGTGACATGGCGAGT 59.998 47.619 0.00 0.00 0.00 4.18
5765 6106 1.395954 CTGAATGTGACATGGCGAGTG 59.604 52.381 0.00 0.00 0.00 3.51
5766 6107 0.097674 GAATGTGACATGGCGAGTGC 59.902 55.000 0.00 0.00 41.71 4.40
5767 6108 0.321919 AATGTGACATGGCGAGTGCT 60.322 50.000 0.00 0.00 42.25 4.40
5768 6109 1.022982 ATGTGACATGGCGAGTGCTG 61.023 55.000 0.00 0.00 42.25 4.41
5769 6110 2.743538 TGACATGGCGAGTGCTGC 60.744 61.111 0.00 0.00 42.25 5.25
5770 6111 2.743538 GACATGGCGAGTGCTGCA 60.744 61.111 0.00 0.00 42.25 4.41
5771 6112 2.045634 ACATGGCGAGTGCTGCAT 60.046 55.556 5.27 0.00 42.25 3.96
5772 6113 1.651240 GACATGGCGAGTGCTGCATT 61.651 55.000 5.27 0.00 42.25 3.56
5773 6114 1.063649 CATGGCGAGTGCTGCATTC 59.936 57.895 14.40 14.40 42.25 2.67
5774 6115 1.077930 ATGGCGAGTGCTGCATTCT 60.078 52.632 20.58 7.96 42.25 2.40
5775 6116 1.094073 ATGGCGAGTGCTGCATTCTC 61.094 55.000 20.58 13.96 42.25 2.87
5776 6117 1.449246 GGCGAGTGCTGCATTCTCT 60.449 57.895 20.58 6.88 42.25 3.10
5777 6118 1.703438 GGCGAGTGCTGCATTCTCTG 61.703 60.000 20.58 13.06 42.25 3.35
5778 6119 0.738762 GCGAGTGCTGCATTCTCTGA 60.739 55.000 20.58 0.00 38.39 3.27
5779 6120 1.718396 CGAGTGCTGCATTCTCTGAA 58.282 50.000 20.58 0.00 0.00 3.02
5780 6121 2.277969 CGAGTGCTGCATTCTCTGAAT 58.722 47.619 20.58 0.00 0.00 2.57
5781 6122 2.284684 CGAGTGCTGCATTCTCTGAATC 59.715 50.000 20.58 0.00 0.00 2.52
5782 6123 3.268330 GAGTGCTGCATTCTCTGAATCA 58.732 45.455 16.75 0.00 0.00 2.57
5783 6124 3.682696 AGTGCTGCATTCTCTGAATCAA 58.317 40.909 5.27 0.00 0.00 2.57
5784 6125 3.690139 AGTGCTGCATTCTCTGAATCAAG 59.310 43.478 5.27 0.00 0.00 3.02
5785 6126 3.439476 GTGCTGCATTCTCTGAATCAAGT 59.561 43.478 5.27 0.00 0.00 3.16
5786 6127 4.077108 TGCTGCATTCTCTGAATCAAGTT 58.923 39.130 0.00 0.00 0.00 2.66
5787 6128 4.521639 TGCTGCATTCTCTGAATCAAGTTT 59.478 37.500 0.00 0.00 0.00 2.66
5788 6129 5.094134 GCTGCATTCTCTGAATCAAGTTTC 58.906 41.667 0.00 0.00 0.00 2.78
5789 6130 5.335426 GCTGCATTCTCTGAATCAAGTTTCA 60.335 40.000 0.00 0.00 34.55 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 8.919661 CCTAGTGCATTTTCAAAAGAAGATTTC 58.080 33.333 0.00 0.00 0.00 2.17
18 19 7.386025 GCCTAGTGCATTTTCAAAAGAAGATTT 59.614 33.333 0.00 0.00 40.77 2.17
43 44 6.978080 TGAAAACAGTTATTTTTCTCCACAGC 59.022 34.615 8.56 0.00 41.57 4.40
44 45 8.925161 TTGAAAACAGTTATTTTTCTCCACAG 57.075 30.769 8.56 0.00 41.57 3.66
81 85 3.038280 TGGAGGAGTATGTACCATGTGG 58.962 50.000 0.00 0.00 42.17 4.17
181 188 5.360714 AGGAAGTTTGATTCAAGACAAAGCA 59.639 36.000 0.00 0.00 36.81 3.91
203 210 4.052159 ACGAGCTTGATCATACTTCAGG 57.948 45.455 8.31 0.00 0.00 3.86
380 517 5.097529 CGTGTCTTTTTAGTCCGCATAGTA 58.902 41.667 0.00 0.00 0.00 1.82
381 518 3.924686 CGTGTCTTTTTAGTCCGCATAGT 59.075 43.478 0.00 0.00 0.00 2.12
382 519 3.306166 CCGTGTCTTTTTAGTCCGCATAG 59.694 47.826 0.00 0.00 0.00 2.23
387 524 2.334838 CCTCCGTGTCTTTTTAGTCCG 58.665 52.381 0.00 0.00 0.00 4.79
870 1031 1.226603 CGAGACCGATGGACGAACC 60.227 63.158 0.00 0.00 45.77 3.62
891 1053 5.507650 GGGGCAGAATAAGACGAGTAACTAG 60.508 48.000 0.00 0.00 0.00 2.57
1136 1302 0.951558 GGCACAACCACAAATCGAGT 59.048 50.000 0.00 0.00 38.86 4.18
1156 1322 2.042842 ACCACACCCATGAATCATCCAA 59.957 45.455 0.00 0.00 0.00 3.53
1180 1346 5.642491 CCAATCCTAGCAGATGTACATGATG 59.358 44.000 14.43 12.70 0.00 3.07
1184 1350 3.649981 AGCCAATCCTAGCAGATGTACAT 59.350 43.478 8.43 8.43 0.00 2.29
1357 1523 4.582701 TTGCGTCAACATTTGGAAGAAT 57.417 36.364 0.00 0.00 0.00 2.40
1424 1597 5.953183 TGGCACAGATATGATTTGAACAAC 58.047 37.500 0.00 0.00 0.00 3.32
1470 1643 5.530915 ACATCTGAATTTCAACGTGGAAAGA 59.469 36.000 21.94 14.39 39.88 2.52
1488 1662 5.379003 GCACAAATGATTTGCAAACATCTG 58.621 37.500 15.41 17.40 44.39 2.90
1528 1702 8.615211 CACATGATGCACAATTAATACACTACT 58.385 33.333 0.00 0.00 0.00 2.57
1727 1901 7.805542 CCTGATCGAATACGCCATTATATAGAG 59.194 40.741 0.00 0.00 39.58 2.43
1798 1972 1.421646 ACCAGAAAGGCTGTAAGTGCT 59.578 47.619 0.00 0.00 43.33 4.40
1813 1987 4.844998 TGCATGATTTTTCGAAACCAGA 57.155 36.364 10.79 0.00 0.00 3.86
1890 2067 8.734218 TGTACAAGGTACAAAAACTCATAACA 57.266 30.769 6.75 0.00 0.00 2.41
2073 2250 9.420966 CAACACACGTATTCACATAATATTGAC 57.579 33.333 0.00 0.00 0.00 3.18
3026 3207 2.163412 GTCCAAATGCCATACTTCGCAA 59.837 45.455 0.00 0.00 38.75 4.85
3355 3536 8.807948 ACAAATATAATGGAAGCACAAGTAGT 57.192 30.769 0.00 0.00 0.00 2.73
3356 3537 9.507280 CAACAAATATAATGGAAGCACAAGTAG 57.493 33.333 0.00 0.00 0.00 2.57
3357 3538 9.237187 TCAACAAATATAATGGAAGCACAAGTA 57.763 29.630 0.00 0.00 0.00 2.24
3358 3539 8.121305 TCAACAAATATAATGGAAGCACAAGT 57.879 30.769 0.00 0.00 0.00 3.16
3642 3844 7.949690 TGTTGGCTACTACTAGAAGATGTAA 57.050 36.000 0.00 0.00 0.00 2.41
3643 3845 7.949690 TTGTTGGCTACTACTAGAAGATGTA 57.050 36.000 0.00 0.00 0.00 2.29
3987 4191 0.975135 ATGATCCTCATCCTCGCAGG 59.025 55.000 0.00 0.00 29.59 4.85
4115 4319 7.675619 ACTGATTTCCTTCAAATGGATACCTTT 59.324 33.333 0.00 0.00 34.60 3.11
4147 4355 4.509616 TGAACTCCGTGTTTCAGAAGAAA 58.490 39.130 0.00 0.00 41.26 2.52
4173 4381 6.265422 GGTAGCTTATTAATGAACCATGCCTT 59.735 38.462 0.00 0.00 0.00 4.35
4220 4428 4.468765 AATCAGTGTCCATCTCACTCAG 57.531 45.455 0.00 0.00 43.14 3.35
4274 4482 1.448540 CCTTTGCTCTGTCCGCGAT 60.449 57.895 8.23 0.00 0.00 4.58
4418 4629 3.118408 TGTTATACCCAGATGCAGGTCAC 60.118 47.826 0.00 0.00 37.59 3.67
4442 4653 3.990806 TTGCGCGGTTCGTTCGTG 61.991 61.111 8.83 0.00 41.07 4.35
4502 4714 3.428045 GCAGAAAGCAAGTTCACAGTTGT 60.428 43.478 0.00 0.00 44.79 3.32
4585 4797 1.515521 CGTTGGCCTTGTGTTCCTCC 61.516 60.000 3.32 0.00 0.00 4.30
4917 5140 2.048222 CACGGGTGATCACAGCGT 60.048 61.111 26.47 10.09 44.31 5.07
4989 5221 8.336235 TGGTATTCCCTCATCTTGAGTAAAAAT 58.664 33.333 4.00 1.70 42.80 1.82
4990 5222 7.695055 TGGTATTCCCTCATCTTGAGTAAAAA 58.305 34.615 4.00 0.00 42.80 1.94
4991 5223 7.265599 TGGTATTCCCTCATCTTGAGTAAAA 57.734 36.000 4.00 0.00 42.80 1.52
5017 5249 2.435805 CTCAGTACTACATGCCCATGGT 59.564 50.000 11.73 4.70 42.91 3.55
5018 5250 2.435805 ACTCAGTACTACATGCCCATGG 59.564 50.000 4.14 4.14 42.91 3.66
5019 5251 3.827008 ACTCAGTACTACATGCCCATG 57.173 47.619 6.71 6.71 44.15 3.66
5020 5252 6.500589 AAATACTCAGTACTACATGCCCAT 57.499 37.500 0.00 0.00 0.00 4.00
5021 5253 5.950544 AAATACTCAGTACTACATGCCCA 57.049 39.130 0.00 0.00 0.00 5.36
5065 5302 6.368516 CACTTGTTTGACTTTTCACACCAATT 59.631 34.615 0.00 0.00 32.26 2.32
5066 5303 5.868801 CACTTGTTTGACTTTTCACACCAAT 59.131 36.000 0.00 0.00 32.26 3.16
5067 5304 5.226396 CACTTGTTTGACTTTTCACACCAA 58.774 37.500 0.00 0.00 32.26 3.67
5070 5307 3.612423 GGCACTTGTTTGACTTTTCACAC 59.388 43.478 0.00 0.00 33.65 3.82
5071 5308 3.509575 AGGCACTTGTTTGACTTTTCACA 59.490 39.130 0.00 0.00 25.97 3.58
5072 5309 3.859386 CAGGCACTTGTTTGACTTTTCAC 59.141 43.478 0.00 0.00 34.60 3.18
5074 5311 3.119137 ACCAGGCACTTGTTTGACTTTTC 60.119 43.478 0.00 0.00 34.60 2.29
5076 5313 2.166254 CACCAGGCACTTGTTTGACTTT 59.834 45.455 0.00 0.00 34.60 2.66
5079 5317 0.249031 GCACCAGGCACTTGTTTGAC 60.249 55.000 0.00 0.00 43.97 3.18
5103 5341 5.904362 AACTGAAGATTCAAATGGTAGGC 57.096 39.130 0.00 0.00 36.64 3.93
5139 5378 1.938016 GCTTTTGAACCAGCTGCCATG 60.938 52.381 8.66 0.00 32.87 3.66
5143 5382 1.796459 CAATGCTTTTGAACCAGCTGC 59.204 47.619 8.66 0.00 36.92 5.25
5146 5385 2.997986 CCATCAATGCTTTTGAACCAGC 59.002 45.455 6.73 0.00 36.49 4.85
5150 5389 7.542130 CCTAGTTTACCATCAATGCTTTTGAAC 59.458 37.037 6.73 1.12 31.55 3.18
5160 5399 7.504926 TGGTTAGACCTAGTTTACCATCAAT 57.495 36.000 0.00 0.00 39.58 2.57
5164 5403 6.120220 GCATTGGTTAGACCTAGTTTACCAT 58.880 40.000 0.00 0.00 39.58 3.55
5167 5406 7.120726 ACAATGCATTGGTTAGACCTAGTTTAC 59.879 37.037 35.85 0.00 41.96 2.01
5191 5430 5.163237 GCCATGGGAAACTTATAGGAGTACA 60.163 44.000 15.13 0.00 0.00 2.90
5194 5433 3.785887 TGCCATGGGAAACTTATAGGAGT 59.214 43.478 15.13 0.00 0.00 3.85
5195 5434 4.437682 TGCCATGGGAAACTTATAGGAG 57.562 45.455 15.13 0.00 0.00 3.69
5196 5435 4.871871 TTGCCATGGGAAACTTATAGGA 57.128 40.909 17.38 0.00 0.00 2.94
5197 5436 5.598005 TGAATTGCCATGGGAAACTTATAGG 59.402 40.000 23.50 0.00 0.00 2.57
5198 5437 6.713762 TGAATTGCCATGGGAAACTTATAG 57.286 37.500 23.50 0.00 0.00 1.31
5200 5439 5.070847 GGATGAATTGCCATGGGAAACTTAT 59.929 40.000 23.50 14.43 0.00 1.73
5202 5441 3.198417 GGATGAATTGCCATGGGAAACTT 59.802 43.478 23.50 13.60 0.00 2.66
5203 5442 2.767960 GGATGAATTGCCATGGGAAACT 59.232 45.455 23.50 13.04 0.00 2.66
5204 5443 2.500910 TGGATGAATTGCCATGGGAAAC 59.499 45.455 23.50 18.89 0.00 2.78
5205 5444 2.830293 TGGATGAATTGCCATGGGAAA 58.170 42.857 23.50 7.07 0.00 3.13
5207 5446 2.779429 ATGGATGAATTGCCATGGGA 57.221 45.000 15.13 8.24 43.04 4.37
5208 5447 3.134985 TCAAATGGATGAATTGCCATGGG 59.865 43.478 15.13 0.00 43.85 4.00
5209 5448 4.409718 TCAAATGGATGAATTGCCATGG 57.590 40.909 7.63 7.63 43.85 3.66
5210 5449 5.644206 TGTTTCAAATGGATGAATTGCCATG 59.356 36.000 0.00 0.00 43.85 3.66
5214 5453 6.730960 ACATGTTTCAAATGGATGAATTGC 57.269 33.333 0.00 0.00 38.98 3.56
5275 5514 2.880890 GCAGAGAGACAGGCAAGAAAAA 59.119 45.455 0.00 0.00 0.00 1.94
5276 5515 2.105477 AGCAGAGAGACAGGCAAGAAAA 59.895 45.455 0.00 0.00 0.00 2.29
5277 5516 1.696336 AGCAGAGAGACAGGCAAGAAA 59.304 47.619 0.00 0.00 0.00 2.52
5278 5517 1.346062 AGCAGAGAGACAGGCAAGAA 58.654 50.000 0.00 0.00 0.00 2.52
5279 5518 1.821753 GTAGCAGAGAGACAGGCAAGA 59.178 52.381 0.00 0.00 0.00 3.02
5284 5523 5.757320 CCATAATTTGTAGCAGAGAGACAGG 59.243 44.000 0.00 0.00 0.00 4.00
5295 5534 7.100458 ACACCTGAATTCCATAATTTGTAGC 57.900 36.000 2.27 0.00 35.41 3.58
5345 5686 0.733566 GCCACGTGTTGAATGCATGG 60.734 55.000 15.65 0.00 0.00 3.66
5352 5693 2.174969 GGTCGTGCCACGTGTTGAA 61.175 57.895 17.83 0.00 43.14 2.69
5374 5715 1.199097 CAATTCGGTGTGGTTGTAGGC 59.801 52.381 0.00 0.00 0.00 3.93
5389 5730 5.132897 TGCCACACTTTAATGTCCAATTC 57.867 39.130 0.00 0.00 0.00 2.17
5417 5758 9.783256 GACGCTAATTTTTGGTTAGTATCATTT 57.217 29.630 0.00 0.00 32.90 2.32
5418 5759 8.120465 CGACGCTAATTTTTGGTTAGTATCATT 58.880 33.333 0.00 0.00 32.90 2.57
5419 5760 7.493320 TCGACGCTAATTTTTGGTTAGTATCAT 59.507 33.333 0.00 0.00 32.90 2.45
5420 5761 6.812656 TCGACGCTAATTTTTGGTTAGTATCA 59.187 34.615 0.00 0.00 32.90 2.15
5421 5762 7.225523 TCGACGCTAATTTTTGGTTAGTATC 57.774 36.000 0.00 0.00 32.90 2.24
5422 5763 7.332678 AGTTCGACGCTAATTTTTGGTTAGTAT 59.667 33.333 0.00 0.00 32.90 2.12
5423 5764 6.646240 AGTTCGACGCTAATTTTTGGTTAGTA 59.354 34.615 0.00 0.00 32.90 1.82
5424 5765 5.467735 AGTTCGACGCTAATTTTTGGTTAGT 59.532 36.000 0.00 0.00 32.90 2.24
5425 5766 5.923665 AGTTCGACGCTAATTTTTGGTTAG 58.076 37.500 0.00 0.00 33.36 2.34
5426 5767 5.927954 AGTTCGACGCTAATTTTTGGTTA 57.072 34.783 0.00 0.00 0.00 2.85
5427 5768 4.823790 AGTTCGACGCTAATTTTTGGTT 57.176 36.364 0.00 0.00 0.00 3.67
5428 5769 4.823790 AAGTTCGACGCTAATTTTTGGT 57.176 36.364 0.00 0.00 0.00 3.67
5429 5770 6.311723 ACATAAGTTCGACGCTAATTTTTGG 58.688 36.000 0.00 0.00 0.00 3.28
5430 5771 6.464834 GGACATAAGTTCGACGCTAATTTTTG 59.535 38.462 0.00 0.00 0.00 2.44
5431 5772 6.148150 TGGACATAAGTTCGACGCTAATTTTT 59.852 34.615 0.00 0.00 0.00 1.94
5432 5773 5.640357 TGGACATAAGTTCGACGCTAATTTT 59.360 36.000 0.00 0.00 0.00 1.82
5433 5774 5.172934 TGGACATAAGTTCGACGCTAATTT 58.827 37.500 0.00 0.00 0.00 1.82
5434 5775 4.751060 TGGACATAAGTTCGACGCTAATT 58.249 39.130 0.00 0.00 0.00 1.40
5435 5776 4.380841 TGGACATAAGTTCGACGCTAAT 57.619 40.909 0.00 0.00 0.00 1.73
5436 5777 3.853831 TGGACATAAGTTCGACGCTAA 57.146 42.857 0.00 0.00 0.00 3.09
5437 5778 3.853831 TTGGACATAAGTTCGACGCTA 57.146 42.857 0.00 0.00 0.00 4.26
5438 5779 2.736144 TTGGACATAAGTTCGACGCT 57.264 45.000 0.00 0.00 0.00 5.07
5439 5780 2.034842 CGATTGGACATAAGTTCGACGC 60.035 50.000 0.00 0.00 0.00 5.19
5440 5781 3.431856 TCGATTGGACATAAGTTCGACG 58.568 45.455 0.00 0.00 30.75 5.12
5441 5782 5.041287 TCATCGATTGGACATAAGTTCGAC 58.959 41.667 0.00 0.00 36.47 4.20
5442 5783 5.163550 ACTCATCGATTGGACATAAGTTCGA 60.164 40.000 0.00 0.00 37.59 3.71
5443 5784 5.043903 ACTCATCGATTGGACATAAGTTCG 58.956 41.667 0.00 0.00 0.00 3.95
5444 5785 8.085296 AGATACTCATCGATTGGACATAAGTTC 58.915 37.037 0.00 0.00 36.20 3.01
5445 5786 7.957002 AGATACTCATCGATTGGACATAAGTT 58.043 34.615 0.00 0.00 36.20 2.66
5446 5787 7.531857 AGATACTCATCGATTGGACATAAGT 57.468 36.000 0.00 0.00 36.20 2.24
5447 5788 8.706936 CAAAGATACTCATCGATTGGACATAAG 58.293 37.037 0.00 0.00 36.20 1.73
5448 5789 8.421002 TCAAAGATACTCATCGATTGGACATAA 58.579 33.333 0.00 0.00 35.40 1.90
5449 5790 7.951591 TCAAAGATACTCATCGATTGGACATA 58.048 34.615 0.00 0.00 35.40 2.29
5450 5791 6.820335 TCAAAGATACTCATCGATTGGACAT 58.180 36.000 0.00 0.00 35.40 3.06
5451 5792 6.220726 TCAAAGATACTCATCGATTGGACA 57.779 37.500 0.00 0.00 35.40 4.02
5452 5793 6.703607 ACATCAAAGATACTCATCGATTGGAC 59.296 38.462 0.00 0.00 35.40 4.02
5453 5794 6.820335 ACATCAAAGATACTCATCGATTGGA 58.180 36.000 0.00 0.00 35.40 3.53
5454 5795 6.703165 TGACATCAAAGATACTCATCGATTGG 59.297 38.462 0.00 0.00 35.40 3.16
5455 5796 7.223387 TGTGACATCAAAGATACTCATCGATTG 59.777 37.037 0.00 0.00 36.20 2.67
5456 5797 7.267857 TGTGACATCAAAGATACTCATCGATT 58.732 34.615 0.00 0.00 36.20 3.34
5457 5798 6.809869 TGTGACATCAAAGATACTCATCGAT 58.190 36.000 0.00 0.00 36.20 3.59
5458 5799 6.207691 TGTGACATCAAAGATACTCATCGA 57.792 37.500 0.00 0.00 36.20 3.59
5459 5800 5.051173 GCTGTGACATCAAAGATACTCATCG 60.051 44.000 3.08 0.00 32.93 3.84
5460 5801 5.236047 GGCTGTGACATCAAAGATACTCATC 59.764 44.000 3.08 0.00 32.93 2.92
5461 5802 5.121811 GGCTGTGACATCAAAGATACTCAT 58.878 41.667 3.08 0.00 32.93 2.90
5462 5803 4.020307 TGGCTGTGACATCAAAGATACTCA 60.020 41.667 3.08 0.00 32.93 3.41
5463 5804 4.507710 TGGCTGTGACATCAAAGATACTC 58.492 43.478 3.08 0.00 32.93 2.59
5464 5805 4.511527 CTGGCTGTGACATCAAAGATACT 58.488 43.478 3.08 0.00 32.93 2.12
5465 5806 3.624861 CCTGGCTGTGACATCAAAGATAC 59.375 47.826 3.08 0.00 32.93 2.24
5466 5807 3.877559 CCTGGCTGTGACATCAAAGATA 58.122 45.455 3.08 0.00 32.93 1.98
5467 5808 2.719739 CCTGGCTGTGACATCAAAGAT 58.280 47.619 3.08 0.00 32.93 2.40
5468 5809 1.883638 GCCTGGCTGTGACATCAAAGA 60.884 52.381 12.43 0.00 32.93 2.52
5469 5810 0.524862 GCCTGGCTGTGACATCAAAG 59.475 55.000 12.43 0.00 34.31 2.77
5470 5811 0.178995 TGCCTGGCTGTGACATCAAA 60.179 50.000 21.03 0.00 0.00 2.69
5471 5812 0.607217 CTGCCTGGCTGTGACATCAA 60.607 55.000 21.03 0.00 0.00 2.57
5472 5813 1.002990 CTGCCTGGCTGTGACATCA 60.003 57.895 21.03 0.00 0.00 3.07
5473 5814 0.250234 TACTGCCTGGCTGTGACATC 59.750 55.000 33.20 0.00 40.67 3.06
5474 5815 0.692476 TTACTGCCTGGCTGTGACAT 59.308 50.000 33.20 14.46 40.67 3.06
5475 5816 0.692476 ATTACTGCCTGGCTGTGACA 59.308 50.000 33.20 20.57 40.67 3.58
5476 5817 1.089920 CATTACTGCCTGGCTGTGAC 58.910 55.000 33.20 0.68 40.67 3.67
5477 5818 0.035152 CCATTACTGCCTGGCTGTGA 60.035 55.000 33.20 27.73 40.67 3.58
5478 5819 0.322816 ACCATTACTGCCTGGCTGTG 60.323 55.000 33.20 21.82 40.67 3.66
5479 5820 0.322816 CACCATTACTGCCTGGCTGT 60.323 55.000 29.91 29.91 42.86 4.40
5480 5821 0.035152 TCACCATTACTGCCTGGCTG 60.035 55.000 22.17 22.17 35.88 4.85
5481 5822 0.698238 TTCACCATTACTGCCTGGCT 59.302 50.000 21.03 2.51 35.88 4.75
5482 5823 1.474077 CTTTCACCATTACTGCCTGGC 59.526 52.381 12.87 12.87 35.88 4.85
5483 5824 3.071874 TCTTTCACCATTACTGCCTGG 57.928 47.619 0.00 0.00 38.55 4.45
5484 5825 5.649782 ATTTCTTTCACCATTACTGCCTG 57.350 39.130 0.00 0.00 0.00 4.85
5485 5826 6.670695 AAATTTCTTTCACCATTACTGCCT 57.329 33.333 0.00 0.00 0.00 4.75
5486 5827 6.347644 GCAAAATTTCTTTCACCATTACTGCC 60.348 38.462 0.00 0.00 0.00 4.85
5487 5828 6.593072 GCAAAATTTCTTTCACCATTACTGC 58.407 36.000 0.00 0.00 0.00 4.40
5488 5829 6.616260 GCGCAAAATTTCTTTCACCATTACTG 60.616 38.462 0.30 0.00 0.00 2.74
5489 5830 5.405269 GCGCAAAATTTCTTTCACCATTACT 59.595 36.000 0.30 0.00 0.00 2.24
5490 5831 5.608146 GCGCAAAATTTCTTTCACCATTAC 58.392 37.500 0.30 0.00 0.00 1.89
5491 5832 4.384247 CGCGCAAAATTTCTTTCACCATTA 59.616 37.500 8.75 0.00 0.00 1.90
5492 5833 3.184178 CGCGCAAAATTTCTTTCACCATT 59.816 39.130 8.75 0.00 0.00 3.16
5493 5834 2.730928 CGCGCAAAATTTCTTTCACCAT 59.269 40.909 8.75 0.00 0.00 3.55
5494 5835 2.123342 CGCGCAAAATTTCTTTCACCA 58.877 42.857 8.75 0.00 0.00 4.17
5495 5836 1.455408 CCGCGCAAAATTTCTTTCACC 59.545 47.619 8.75 0.00 0.00 4.02
5496 5837 2.124122 ACCGCGCAAAATTTCTTTCAC 58.876 42.857 8.75 0.00 0.00 3.18
5497 5838 2.389998 GACCGCGCAAAATTTCTTTCA 58.610 42.857 8.75 0.00 0.00 2.69
5498 5839 1.382088 CGACCGCGCAAAATTTCTTTC 59.618 47.619 8.75 0.00 0.00 2.62
5499 5840 1.002251 TCGACCGCGCAAAATTTCTTT 60.002 42.857 8.75 0.00 37.46 2.52
5500 5841 0.589223 TCGACCGCGCAAAATTTCTT 59.411 45.000 8.75 0.00 37.46 2.52
5501 5842 0.110373 GTCGACCGCGCAAAATTTCT 60.110 50.000 8.75 0.00 37.46 2.52
5502 5843 0.384974 TGTCGACCGCGCAAAATTTC 60.385 50.000 14.12 0.00 37.46 2.17
5503 5844 0.659123 GTGTCGACCGCGCAAAATTT 60.659 50.000 14.12 0.00 37.46 1.82
5504 5845 1.082366 GTGTCGACCGCGCAAAATT 60.082 52.632 14.12 0.00 37.46 1.82
5505 5846 2.554272 GTGTCGACCGCGCAAAAT 59.446 55.556 14.12 0.00 37.46 1.82
5506 5847 3.990806 CGTGTCGACCGCGCAAAA 61.991 61.111 14.12 0.00 40.62 2.44
5512 5853 0.733566 TAAATCCACGTGTCGACCGC 60.734 55.000 21.23 10.82 0.00 5.68
5513 5854 1.265568 CTAAATCCACGTGTCGACCG 58.734 55.000 20.16 20.16 0.00 4.79
5514 5855 0.997196 GCTAAATCCACGTGTCGACC 59.003 55.000 15.65 3.43 0.00 4.79
5515 5856 1.654105 CAGCTAAATCCACGTGTCGAC 59.346 52.381 15.65 9.11 0.00 4.20
5516 5857 1.403647 CCAGCTAAATCCACGTGTCGA 60.404 52.381 15.65 5.84 0.00 4.20
5517 5858 0.999406 CCAGCTAAATCCACGTGTCG 59.001 55.000 15.65 0.00 0.00 4.35
5518 5859 0.727398 GCCAGCTAAATCCACGTGTC 59.273 55.000 15.65 0.00 0.00 3.67
5519 5860 0.324943 AGCCAGCTAAATCCACGTGT 59.675 50.000 15.65 0.00 0.00 4.49
5520 5861 2.309528 TAGCCAGCTAAATCCACGTG 57.690 50.000 9.08 9.08 0.00 4.49
5521 5862 2.629051 GTTAGCCAGCTAAATCCACGT 58.371 47.619 13.44 0.00 39.82 4.49
5522 5863 1.940613 GGTTAGCCAGCTAAATCCACG 59.059 52.381 13.44 0.00 39.82 4.94
5523 5864 1.940613 CGGTTAGCCAGCTAAATCCAC 59.059 52.381 13.44 2.15 39.82 4.02
5524 5865 1.557832 ACGGTTAGCCAGCTAAATCCA 59.442 47.619 13.44 0.00 39.82 3.41
5525 5866 2.327200 ACGGTTAGCCAGCTAAATCC 57.673 50.000 13.44 10.56 39.82 3.01
5526 5867 3.554731 GTGTACGGTTAGCCAGCTAAATC 59.445 47.826 13.44 8.39 39.82 2.17
5527 5868 3.528532 GTGTACGGTTAGCCAGCTAAAT 58.471 45.455 13.44 5.68 39.82 1.40
5528 5869 2.671914 CGTGTACGGTTAGCCAGCTAAA 60.672 50.000 13.44 0.00 39.82 1.85
5529 5870 1.135315 CGTGTACGGTTAGCCAGCTAA 60.135 52.381 8.01 8.01 34.60 3.09
5530 5871 0.452987 CGTGTACGGTTAGCCAGCTA 59.547 55.000 0.00 0.00 35.37 3.32
5531 5872 1.214589 CGTGTACGGTTAGCCAGCT 59.785 57.895 0.00 0.00 35.37 4.24
5532 5873 1.080298 ACGTGTACGGTTAGCCAGC 60.080 57.895 9.40 0.00 44.95 4.85
5533 5874 0.038892 ACACGTGTACGGTTAGCCAG 60.039 55.000 21.98 0.00 44.95 4.85
5534 5875 0.318869 CACACGTGTACGGTTAGCCA 60.319 55.000 22.90 0.00 44.95 4.75
5535 5876 1.620413 GCACACGTGTACGGTTAGCC 61.620 60.000 22.90 0.16 44.95 3.93
5536 5877 1.620413 GGCACACGTGTACGGTTAGC 61.620 60.000 22.90 17.98 44.95 3.09
5537 5878 1.339235 CGGCACACGTGTACGGTTAG 61.339 60.000 27.42 14.33 44.95 2.34
5538 5879 1.371512 CGGCACACGTGTACGGTTA 60.372 57.895 27.42 0.00 44.95 2.85
5539 5880 2.424705 ATCGGCACACGTGTACGGTT 62.425 55.000 31.37 19.58 44.95 4.44
5540 5881 2.807631 GATCGGCACACGTGTACGGT 62.808 60.000 31.37 28.35 44.95 4.83
5541 5882 2.126228 ATCGGCACACGTGTACGG 60.126 61.111 31.37 25.42 44.95 4.02
5542 5883 1.443025 TGATCGGCACACGTGTACG 60.443 57.895 28.53 28.53 44.69 3.67
5543 5884 2.067616 GTGATCGGCACACGTGTAC 58.932 57.895 22.90 16.50 46.91 2.90
5544 5885 4.563630 GTGATCGGCACACGTGTA 57.436 55.556 22.90 6.04 46.91 2.90
5555 5896 0.530650 CTTCCCCGACCATGTGATCG 60.531 60.000 4.70 4.70 38.08 3.69
5556 5897 0.179045 CCTTCCCCGACCATGTGATC 60.179 60.000 0.00 0.00 0.00 2.92
5557 5898 0.620410 TCCTTCCCCGACCATGTGAT 60.620 55.000 0.00 0.00 0.00 3.06
5558 5899 0.838554 TTCCTTCCCCGACCATGTGA 60.839 55.000 0.00 0.00 0.00 3.58
5559 5900 0.676782 GTTCCTTCCCCGACCATGTG 60.677 60.000 0.00 0.00 0.00 3.21
5560 5901 1.683441 GTTCCTTCCCCGACCATGT 59.317 57.895 0.00 0.00 0.00 3.21
5561 5902 1.077716 GGTTCCTTCCCCGACCATG 60.078 63.158 0.00 0.00 32.41 3.66
5562 5903 3.411700 GGTTCCTTCCCCGACCAT 58.588 61.111 0.00 0.00 32.41 3.55
5569 5910 4.832608 ATCGCGCGGTTCCTTCCC 62.833 66.667 31.69 0.00 0.00 3.97
5570 5911 3.262686 GATCGCGCGGTTCCTTCC 61.263 66.667 31.69 5.54 0.00 3.46
5571 5912 2.202756 AGATCGCGCGGTTCCTTC 60.203 61.111 31.69 10.72 0.00 3.46
5572 5913 2.202756 GAGATCGCGCGGTTCCTT 60.203 61.111 31.69 10.14 0.00 3.36
5573 5914 4.554363 CGAGATCGCGCGGTTCCT 62.554 66.667 31.69 17.94 33.49 3.36
5574 5915 4.849329 ACGAGATCGCGCGGTTCC 62.849 66.667 31.69 17.40 44.43 3.62
5575 5916 2.370824 TAGACGAGATCGCGCGGTTC 62.371 60.000 31.69 25.45 44.43 3.62
5576 5917 2.466982 TAGACGAGATCGCGCGGTT 61.467 57.895 31.69 18.38 44.43 4.44
5577 5918 2.893895 TAGACGAGATCGCGCGGT 60.894 61.111 31.69 26.40 44.43 5.68
5578 5919 2.425448 GTAGACGAGATCGCGCGG 60.425 66.667 31.69 16.11 44.43 6.46
5579 5920 2.787725 CGTAGACGAGATCGCGCG 60.788 66.667 26.76 26.76 44.43 6.86
5580 5921 2.425448 CCGTAGACGAGATCGCGC 60.425 66.667 19.16 11.49 44.43 6.86
5581 5922 2.425448 GCCGTAGACGAGATCGCG 60.425 66.667 17.67 17.67 44.43 5.87
5582 5923 1.369448 CAGCCGTAGACGAGATCGC 60.369 63.158 3.07 0.00 44.43 4.58
5583 5924 0.656259 TTCAGCCGTAGACGAGATCG 59.344 55.000 3.07 0.00 43.02 3.69
5584 5925 1.598430 GCTTCAGCCGTAGACGAGATC 60.598 57.143 3.07 0.00 43.02 2.75
5585 5926 0.382515 GCTTCAGCCGTAGACGAGAT 59.617 55.000 3.07 0.00 43.02 2.75
5586 5927 0.958876 TGCTTCAGCCGTAGACGAGA 60.959 55.000 3.07 0.00 41.18 4.04
5587 5928 0.101399 ATGCTTCAGCCGTAGACGAG 59.899 55.000 3.07 0.00 41.18 4.18
5588 5929 0.179137 CATGCTTCAGCCGTAGACGA 60.179 55.000 3.07 0.00 41.18 4.20
5589 5930 0.458543 ACATGCTTCAGCCGTAGACG 60.459 55.000 0.00 0.00 41.18 4.18
5590 5931 1.281899 GACATGCTTCAGCCGTAGAC 58.718 55.000 0.00 0.00 41.18 2.59
5591 5932 0.179137 CGACATGCTTCAGCCGTAGA 60.179 55.000 0.00 0.00 41.18 2.59
5592 5933 0.179137 TCGACATGCTTCAGCCGTAG 60.179 55.000 0.00 0.00 41.18 3.51
5593 5934 0.459899 ATCGACATGCTTCAGCCGTA 59.540 50.000 0.00 0.00 41.18 4.02
5594 5935 0.391661 AATCGACATGCTTCAGCCGT 60.392 50.000 0.00 0.00 41.18 5.68
5595 5936 0.302890 GAATCGACATGCTTCAGCCG 59.697 55.000 0.00 0.00 41.18 5.52
5596 5937 1.329906 CAGAATCGACATGCTTCAGCC 59.670 52.381 0.00 0.00 41.18 4.85
5597 5938 2.005451 ACAGAATCGACATGCTTCAGC 58.995 47.619 0.00 0.00 42.50 4.26
5598 5939 3.681417 TCAACAGAATCGACATGCTTCAG 59.319 43.478 0.00 0.00 0.00 3.02
5599 5940 3.433274 GTCAACAGAATCGACATGCTTCA 59.567 43.478 0.00 0.00 0.00 3.02
5600 5941 3.482598 CGTCAACAGAATCGACATGCTTC 60.483 47.826 0.00 0.00 0.00 3.86
5601 5942 2.413112 CGTCAACAGAATCGACATGCTT 59.587 45.455 0.00 0.00 0.00 3.91
5602 5943 1.995484 CGTCAACAGAATCGACATGCT 59.005 47.619 0.00 0.00 0.00 3.79
5603 5944 1.061131 CCGTCAACAGAATCGACATGC 59.939 52.381 0.00 0.00 0.00 4.06
5604 5945 2.606108 TCCGTCAACAGAATCGACATG 58.394 47.619 0.00 0.00 0.00 3.21
5605 5946 3.526931 ATCCGTCAACAGAATCGACAT 57.473 42.857 0.00 0.00 0.00 3.06
5606 5947 4.649088 ATATCCGTCAACAGAATCGACA 57.351 40.909 0.00 0.00 0.00 4.35
5607 5948 6.746364 GGTATATATCCGTCAACAGAATCGAC 59.254 42.308 0.00 0.00 0.00 4.20
5608 5949 6.402875 CGGTATATATCCGTCAACAGAATCGA 60.403 42.308 12.68 0.00 42.62 3.59
5609 5950 5.737757 CGGTATATATCCGTCAACAGAATCG 59.262 44.000 12.68 0.00 42.62 3.34
5622 5963 4.202245 TGGCTTTCTGCGGTATATATCC 57.798 45.455 0.00 0.00 44.05 2.59
5623 5964 4.572389 CCATGGCTTTCTGCGGTATATATC 59.428 45.833 0.00 0.00 44.05 1.63
5624 5965 4.517285 CCATGGCTTTCTGCGGTATATAT 58.483 43.478 0.00 0.00 44.05 0.86
5625 5966 3.307410 CCCATGGCTTTCTGCGGTATATA 60.307 47.826 6.09 0.00 44.05 0.86
5626 5967 2.553028 CCCATGGCTTTCTGCGGTATAT 60.553 50.000 6.09 0.00 44.05 0.86
5627 5968 1.202758 CCCATGGCTTTCTGCGGTATA 60.203 52.381 6.09 0.00 44.05 1.47
5628 5969 0.466189 CCCATGGCTTTCTGCGGTAT 60.466 55.000 6.09 0.00 44.05 2.73
5629 5970 1.077787 CCCATGGCTTTCTGCGGTA 60.078 57.895 6.09 0.00 44.05 4.02
5630 5971 2.361610 CCCATGGCTTTCTGCGGT 60.362 61.111 6.09 0.00 44.05 5.68
5631 5972 1.250154 TTTCCCATGGCTTTCTGCGG 61.250 55.000 6.09 0.00 44.05 5.69
5632 5973 0.171903 CTTTCCCATGGCTTTCTGCG 59.828 55.000 6.09 0.00 44.05 5.18
5633 5974 1.549203 TCTTTCCCATGGCTTTCTGC 58.451 50.000 6.09 0.00 41.94 4.26
5634 5975 4.501071 CAATTCTTTCCCATGGCTTTCTG 58.499 43.478 6.09 0.00 0.00 3.02
5635 5976 3.516700 CCAATTCTTTCCCATGGCTTTCT 59.483 43.478 6.09 0.00 0.00 2.52
5636 5977 3.865446 CCAATTCTTTCCCATGGCTTTC 58.135 45.455 6.09 0.00 0.00 2.62
5637 5978 3.986996 CCAATTCTTTCCCATGGCTTT 57.013 42.857 6.09 0.00 0.00 3.51
5641 5982 1.207811 GTGGCCAATTCTTTCCCATGG 59.792 52.381 7.24 4.14 0.00 3.66
5642 5983 1.135024 CGTGGCCAATTCTTTCCCATG 60.135 52.381 7.24 0.00 0.00 3.66
5643 5984 1.185315 CGTGGCCAATTCTTTCCCAT 58.815 50.000 7.24 0.00 0.00 4.00
5644 5985 1.531739 GCGTGGCCAATTCTTTCCCA 61.532 55.000 7.24 0.00 0.00 4.37
5645 5986 1.215382 GCGTGGCCAATTCTTTCCC 59.785 57.895 7.24 0.00 0.00 3.97
5646 5987 0.109132 CTGCGTGGCCAATTCTTTCC 60.109 55.000 7.24 0.00 0.00 3.13
5647 5988 0.109132 CCTGCGTGGCCAATTCTTTC 60.109 55.000 7.24 0.00 0.00 2.62
5648 5989 1.535204 CCCTGCGTGGCCAATTCTTT 61.535 55.000 7.24 0.00 0.00 2.52
5649 5990 1.978617 CCCTGCGTGGCCAATTCTT 60.979 57.895 7.24 0.00 0.00 2.52
5650 5991 2.361610 CCCTGCGTGGCCAATTCT 60.362 61.111 7.24 0.00 0.00 2.40
5651 5992 2.361104 TCCCTGCGTGGCCAATTC 60.361 61.111 7.24 0.00 0.00 2.17
5652 5993 2.676471 GTCCCTGCGTGGCCAATT 60.676 61.111 7.24 0.00 0.00 2.32
5653 5994 3.925630 CTGTCCCTGCGTGGCCAAT 62.926 63.158 7.24 0.00 0.00 3.16
5654 5995 4.641645 CTGTCCCTGCGTGGCCAA 62.642 66.667 7.24 0.00 0.00 4.52
5656 5997 4.329545 TTCTGTCCCTGCGTGGCC 62.330 66.667 0.00 0.00 0.00 5.36
5657 5998 3.050275 GTTCTGTCCCTGCGTGGC 61.050 66.667 0.00 0.00 0.00 5.01
5658 5999 2.738521 CGTTCTGTCCCTGCGTGG 60.739 66.667 0.00 0.00 0.00 4.94
5659 6000 2.738521 CCGTTCTGTCCCTGCGTG 60.739 66.667 0.00 0.00 0.00 5.34
5660 6001 4.681978 GCCGTTCTGTCCCTGCGT 62.682 66.667 0.00 0.00 0.00 5.24
5661 6002 3.958147 ATGCCGTTCTGTCCCTGCG 62.958 63.158 0.00 0.00 0.00 5.18
5662 6003 2.045926 ATGCCGTTCTGTCCCTGC 60.046 61.111 0.00 0.00 0.00 4.85
5663 6004 1.746615 CCATGCCGTTCTGTCCCTG 60.747 63.158 0.00 0.00 0.00 4.45
5664 6005 1.274703 ATCCATGCCGTTCTGTCCCT 61.275 55.000 0.00 0.00 0.00 4.20
5665 6006 0.394352 AATCCATGCCGTTCTGTCCC 60.394 55.000 0.00 0.00 0.00 4.46
5666 6007 0.734889 CAATCCATGCCGTTCTGTCC 59.265 55.000 0.00 0.00 0.00 4.02
5667 6008 0.734889 CCAATCCATGCCGTTCTGTC 59.265 55.000 0.00 0.00 0.00 3.51
5668 6009 0.327924 TCCAATCCATGCCGTTCTGT 59.672 50.000 0.00 0.00 0.00 3.41
5669 6010 1.335810 CATCCAATCCATGCCGTTCTG 59.664 52.381 0.00 0.00 0.00 3.02
5670 6011 1.064463 ACATCCAATCCATGCCGTTCT 60.064 47.619 0.00 0.00 0.00 3.01
5671 6012 1.066002 CACATCCAATCCATGCCGTTC 59.934 52.381 0.00 0.00 0.00 3.95
5672 6013 1.105457 CACATCCAATCCATGCCGTT 58.895 50.000 0.00 0.00 0.00 4.44
5673 6014 0.752743 CCACATCCAATCCATGCCGT 60.753 55.000 0.00 0.00 0.00 5.68
5674 6015 1.457823 CCCACATCCAATCCATGCCG 61.458 60.000 0.00 0.00 0.00 5.69
5675 6016 0.397535 ACCCACATCCAATCCATGCC 60.398 55.000 0.00 0.00 0.00 4.40
5676 6017 1.488390 AACCCACATCCAATCCATGC 58.512 50.000 0.00 0.00 0.00 4.06
5677 6018 2.958355 GGTAACCCACATCCAATCCATG 59.042 50.000 0.00 0.00 0.00 3.66
5678 6019 2.422803 CGGTAACCCACATCCAATCCAT 60.423 50.000 0.00 0.00 0.00 3.41
5679 6020 1.065053 CGGTAACCCACATCCAATCCA 60.065 52.381 0.00 0.00 0.00 3.41
5680 6021 1.210967 TCGGTAACCCACATCCAATCC 59.789 52.381 0.00 0.00 0.00 3.01
5681 6022 2.702592 TCGGTAACCCACATCCAATC 57.297 50.000 0.00 0.00 0.00 2.67
5682 6023 3.662759 AATCGGTAACCCACATCCAAT 57.337 42.857 0.00 0.00 0.00 3.16
5683 6024 4.571369 TTAATCGGTAACCCACATCCAA 57.429 40.909 0.00 0.00 0.00 3.53
5684 6025 4.164413 TGATTAATCGGTAACCCACATCCA 59.836 41.667 10.80 0.00 0.00 3.41
5685 6026 4.710324 TGATTAATCGGTAACCCACATCC 58.290 43.478 10.80 0.00 0.00 3.51
5686 6027 5.587043 TGTTGATTAATCGGTAACCCACATC 59.413 40.000 10.80 0.00 0.00 3.06
5687 6028 5.502079 TGTTGATTAATCGGTAACCCACAT 58.498 37.500 10.80 0.00 0.00 3.21
5688 6029 4.907809 TGTTGATTAATCGGTAACCCACA 58.092 39.130 10.80 1.48 0.00 4.17
5689 6030 5.820947 AGATGTTGATTAATCGGTAACCCAC 59.179 40.000 10.80 4.79 0.00 4.61
5690 6031 5.820423 CAGATGTTGATTAATCGGTAACCCA 59.180 40.000 10.80 0.65 0.00 4.51
5691 6032 6.053005 TCAGATGTTGATTAATCGGTAACCC 58.947 40.000 10.80 5.22 0.00 4.11
5692 6033 7.548196 TTCAGATGTTGATTAATCGGTAACC 57.452 36.000 10.80 0.00 35.27 2.85
5693 6034 7.587757 GCATTCAGATGTTGATTAATCGGTAAC 59.412 37.037 10.80 9.90 35.27 2.50
5694 6035 7.518211 CGCATTCAGATGTTGATTAATCGGTAA 60.518 37.037 10.80 0.00 35.27 2.85
5695 6036 6.073819 CGCATTCAGATGTTGATTAATCGGTA 60.074 38.462 10.80 0.00 35.27 4.02
5696 6037 5.277490 CGCATTCAGATGTTGATTAATCGGT 60.277 40.000 10.80 0.00 35.27 4.69
5697 6038 5.050159 TCGCATTCAGATGTTGATTAATCGG 60.050 40.000 10.80 0.00 35.27 4.18
5698 6039 5.842843 GTCGCATTCAGATGTTGATTAATCG 59.157 40.000 10.80 0.00 35.27 3.34
5699 6040 6.718388 TGTCGCATTCAGATGTTGATTAATC 58.282 36.000 8.60 8.60 35.27 1.75
5700 6041 6.682423 TGTCGCATTCAGATGTTGATTAAT 57.318 33.333 0.00 0.00 35.27 1.40
5701 6042 6.315891 TCATGTCGCATTCAGATGTTGATTAA 59.684 34.615 0.00 0.00 35.27 1.40
5702 6043 5.816777 TCATGTCGCATTCAGATGTTGATTA 59.183 36.000 0.00 0.00 35.27 1.75
5703 6044 4.637091 TCATGTCGCATTCAGATGTTGATT 59.363 37.500 0.00 0.00 35.27 2.57
5704 6045 4.193865 TCATGTCGCATTCAGATGTTGAT 58.806 39.130 0.00 0.00 35.27 2.57
5705 6046 3.598299 TCATGTCGCATTCAGATGTTGA 58.402 40.909 0.00 0.00 35.63 3.18
5706 6047 3.373130 ACTCATGTCGCATTCAGATGTTG 59.627 43.478 0.00 0.00 35.63 3.33
5707 6048 3.603532 ACTCATGTCGCATTCAGATGTT 58.396 40.909 0.00 0.00 35.63 2.71
5708 6049 3.257469 ACTCATGTCGCATTCAGATGT 57.743 42.857 0.00 0.00 35.63 3.06
5709 6050 4.093850 TGAAACTCATGTCGCATTCAGATG 59.906 41.667 0.00 0.00 36.32 2.90
5710 6051 4.256110 TGAAACTCATGTCGCATTCAGAT 58.744 39.130 0.00 0.00 0.00 2.90
5711 6052 3.663025 TGAAACTCATGTCGCATTCAGA 58.337 40.909 0.00 0.00 0.00 3.27
5712 6053 4.152938 TCTTGAAACTCATGTCGCATTCAG 59.847 41.667 0.00 0.00 0.00 3.02
5713 6054 4.064388 TCTTGAAACTCATGTCGCATTCA 58.936 39.130 0.00 0.00 0.00 2.57
5714 6055 4.668576 TCTTGAAACTCATGTCGCATTC 57.331 40.909 0.00 0.00 0.00 2.67
5715 6056 4.756642 TCTTCTTGAAACTCATGTCGCATT 59.243 37.500 0.00 0.00 0.00 3.56
5716 6057 4.318332 TCTTCTTGAAACTCATGTCGCAT 58.682 39.130 0.00 0.00 0.00 4.73
5717 6058 3.727726 TCTTCTTGAAACTCATGTCGCA 58.272 40.909 0.00 0.00 0.00 5.10
5718 6059 4.732285 TTCTTCTTGAAACTCATGTCGC 57.268 40.909 0.00 0.00 0.00 5.19
5719 6060 9.107367 GTTTATTTCTTCTTGAAACTCATGTCG 57.893 33.333 0.00 0.00 46.08 4.35
5721 6062 9.956720 CAGTTTATTTCTTCTTGAAACTCATGT 57.043 29.630 0.00 0.00 46.08 3.21
5729 6070 9.950680 GTCACATTCAGTTTATTTCTTCTTGAA 57.049 29.630 0.00 0.00 0.00 2.69
5730 6071 9.119418 TGTCACATTCAGTTTATTTCTTCTTGA 57.881 29.630 0.00 0.00 0.00 3.02
5731 6072 9.903682 ATGTCACATTCAGTTTATTTCTTCTTG 57.096 29.630 0.00 0.00 0.00 3.02
5732 6073 9.903682 CATGTCACATTCAGTTTATTTCTTCTT 57.096 29.630 0.00 0.00 0.00 2.52
5733 6074 8.517878 CCATGTCACATTCAGTTTATTTCTTCT 58.482 33.333 0.00 0.00 0.00 2.85
5734 6075 7.274250 GCCATGTCACATTCAGTTTATTTCTTC 59.726 37.037 0.00 0.00 0.00 2.87
5735 6076 7.092716 GCCATGTCACATTCAGTTTATTTCTT 58.907 34.615 0.00 0.00 0.00 2.52
5736 6077 6.623549 CGCCATGTCACATTCAGTTTATTTCT 60.624 38.462 0.00 0.00 0.00 2.52
5737 6078 5.512788 CGCCATGTCACATTCAGTTTATTTC 59.487 40.000 0.00 0.00 0.00 2.17
5738 6079 5.182950 TCGCCATGTCACATTCAGTTTATTT 59.817 36.000 0.00 0.00 0.00 1.40
5739 6080 4.699735 TCGCCATGTCACATTCAGTTTATT 59.300 37.500 0.00 0.00 0.00 1.40
5740 6081 4.260985 TCGCCATGTCACATTCAGTTTAT 58.739 39.130 0.00 0.00 0.00 1.40
5741 6082 3.669536 TCGCCATGTCACATTCAGTTTA 58.330 40.909 0.00 0.00 0.00 2.01
5742 6083 2.485426 CTCGCCATGTCACATTCAGTTT 59.515 45.455 0.00 0.00 0.00 2.66
5743 6084 2.079158 CTCGCCATGTCACATTCAGTT 58.921 47.619 0.00 0.00 0.00 3.16
5744 6085 1.002430 ACTCGCCATGTCACATTCAGT 59.998 47.619 0.00 0.00 0.00 3.41
5745 6086 1.395954 CACTCGCCATGTCACATTCAG 59.604 52.381 0.00 0.00 0.00 3.02
5746 6087 1.441738 CACTCGCCATGTCACATTCA 58.558 50.000 0.00 0.00 0.00 2.57
5747 6088 0.097674 GCACTCGCCATGTCACATTC 59.902 55.000 0.00 0.00 0.00 2.67
5748 6089 0.321919 AGCACTCGCCATGTCACATT 60.322 50.000 0.00 0.00 39.83 2.71
5749 6090 1.022982 CAGCACTCGCCATGTCACAT 61.023 55.000 0.00 0.00 39.83 3.21
5750 6091 1.668793 CAGCACTCGCCATGTCACA 60.669 57.895 0.00 0.00 39.83 3.58
5751 6092 3.031964 GCAGCACTCGCCATGTCAC 62.032 63.158 0.00 0.00 39.83 3.67
5752 6093 2.743538 GCAGCACTCGCCATGTCA 60.744 61.111 0.00 0.00 39.83 3.58
5753 6094 1.651240 AATGCAGCACTCGCCATGTC 61.651 55.000 0.00 0.00 39.83 3.06
5754 6095 1.651240 GAATGCAGCACTCGCCATGT 61.651 55.000 0.00 0.00 39.83 3.21
5755 6096 1.063649 GAATGCAGCACTCGCCATG 59.936 57.895 0.00 0.00 39.83 3.66
5756 6097 1.077930 AGAATGCAGCACTCGCCAT 60.078 52.632 0.00 0.00 39.83 4.40
5757 6098 1.742880 GAGAATGCAGCACTCGCCA 60.743 57.895 0.00 0.00 39.83 5.69
5758 6099 1.449246 AGAGAATGCAGCACTCGCC 60.449 57.895 3.79 0.00 39.83 5.54
5759 6100 0.738762 TCAGAGAATGCAGCACTCGC 60.739 55.000 0.00 0.00 36.03 5.03
5760 6101 1.718396 TTCAGAGAATGCAGCACTCG 58.282 50.000 0.00 0.00 36.03 4.18
5761 6102 3.268330 TGATTCAGAGAATGCAGCACTC 58.732 45.455 0.00 0.00 0.00 3.51
5762 6103 3.345508 TGATTCAGAGAATGCAGCACT 57.654 42.857 0.00 0.00 0.00 4.40
5763 6104 3.439476 ACTTGATTCAGAGAATGCAGCAC 59.561 43.478 0.00 0.00 0.00 4.40
5764 6105 3.682696 ACTTGATTCAGAGAATGCAGCA 58.317 40.909 0.00 0.00 0.00 4.41
5765 6106 4.698583 AACTTGATTCAGAGAATGCAGC 57.301 40.909 0.00 0.00 0.00 5.25
5766 6107 6.250344 TGAAACTTGATTCAGAGAATGCAG 57.750 37.500 0.00 0.00 34.50 4.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.