Multiple sequence alignment - TraesCS3B01G168400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G168400 chr3B 100.000 2992 0 0 1 2992 169258090 169261081 0.000000e+00 5526.0
1 TraesCS3B01G168400 chr3B 84.797 763 66 14 2265 2992 252926756 252927503 0.000000e+00 721.0
2 TraesCS3B01G168400 chr3B 84.797 763 66 14 2265 2992 444686557 444685810 0.000000e+00 721.0
3 TraesCS3B01G168400 chr3B 87.654 243 20 10 1918 2151 444687254 444687013 1.060000e-69 274.0
4 TraesCS3B01G168400 chr3B 86.722 241 21 11 1920 2151 252926061 252926299 1.060000e-64 257.0
5 TraesCS3B01G168400 chr3B 92.523 107 7 1 2169 2274 252926612 252926718 5.170000e-33 152.0
6 TraesCS3B01G168400 chr3B 92.523 107 7 1 2169 2274 444686701 444686595 5.170000e-33 152.0
7 TraesCS3B01G168400 chr3B 88.764 89 9 1 1657 1744 424788671 424788583 1.130000e-19 108.0
8 TraesCS3B01G168400 chr3A 89.973 738 39 6 883 1617 112296595 112297300 0.000000e+00 920.0
9 TraesCS3B01G168400 chr3A 77.384 367 69 13 1162 1519 114540549 114540188 3.910000e-49 206.0
10 TraesCS3B01G168400 chr3A 81.183 186 20 12 1743 1914 112297327 112297511 5.200000e-28 135.0
11 TraesCS3B01G168400 chr3A 81.250 160 22 8 189 346 538322791 538322638 4.050000e-24 122.0
12 TraesCS3B01G168400 chr3D 88.529 802 35 12 869 1659 115637376 115638131 0.000000e+00 918.0
13 TraesCS3B01G168400 chr3D 88.150 481 28 8 2265 2718 115642500 115642978 2.030000e-151 545.0
14 TraesCS3B01G168400 chr3D 88.780 410 37 7 470 878 115636796 115637197 7.450000e-136 494.0
15 TraesCS3B01G168400 chr3D 89.606 279 17 5 1835 2110 115640938 115641207 7.940000e-91 344.0
16 TraesCS3B01G168400 chr3D 95.625 160 5 1 2833 2992 115644014 115644171 3.830000e-64 255.0
17 TraesCS3B01G168400 chr3D 98.387 124 2 0 2711 2834 115643809 115643932 5.020000e-53 219.0
18 TraesCS3B01G168400 chr3D 80.370 270 44 7 1249 1510 166966611 166966343 2.350000e-46 196.0
19 TraesCS3B01G168400 chr3D 78.707 263 33 16 158 405 57174251 57174505 1.440000e-33 154.0
20 TraesCS3B01G168400 chr3D 93.939 66 4 0 2099 2164 115642328 115642393 1.900000e-17 100.0
21 TraesCS3B01G168400 chr3D 90.323 62 6 0 1740 1801 115640877 115640938 6.870000e-12 82.4
22 TraesCS3B01G168400 chr7B 85.392 753 69 12 2265 2992 678541678 678540942 0.000000e+00 743.0
23 TraesCS3B01G168400 chr7B 85.714 616 52 17 2265 2847 348971502 348970890 4.240000e-173 617.0
24 TraesCS3B01G168400 chr7B 84.766 256 27 10 1905 2151 678542386 678542134 2.300000e-61 246.0
25 TraesCS3B01G168400 chr7B 94.667 150 8 0 2843 2992 348957920 348957771 1.790000e-57 233.0
26 TraesCS3B01G168400 chr7B 92.523 107 6 2 2169 2274 678541822 678541717 5.170000e-33 152.0
27 TraesCS3B01G168400 chr7B 96.104 77 2 1 383 459 714039163 714039238 1.130000e-24 124.0
28 TraesCS3B01G168400 chr7B 93.421 76 4 1 1671 1745 201496487 201496562 8.770000e-21 111.0
29 TraesCS3B01G168400 chr7A 85.209 764 65 11 2265 2992 119301441 119300690 0.000000e+00 741.0
30 TraesCS3B01G168400 chr7A 84.817 764 68 11 2265 2992 119298496 119297745 0.000000e+00 725.0
31 TraesCS3B01G168400 chr7A 88.670 406 24 9 2265 2653 385441926 385442326 2.700000e-130 475.0
32 TraesCS3B01G168400 chr7A 88.496 226 16 7 1918 2137 385437139 385437360 6.360000e-67 265.0
33 TraesCS3B01G168400 chr7A 93.458 107 6 1 2169 2274 119298640 119298534 1.110000e-34 158.0
34 TraesCS3B01G168400 chr7A 92.523 107 7 1 2169 2274 119301585 119301479 5.170000e-33 152.0
35 TraesCS3B01G168400 chr7A 93.421 76 4 1 1671 1745 30721100 30721175 8.770000e-21 111.0
36 TraesCS3B01G168400 chr7A 91.250 80 7 0 1665 1744 30028495 30028416 3.150000e-20 110.0
37 TraesCS3B01G168400 chr4A 87.011 562 48 7 2453 2992 715189513 715190071 7.090000e-171 610.0
38 TraesCS3B01G168400 chr4A 82.723 191 18 11 1906 2084 715186867 715187054 3.990000e-34 156.0
39 TraesCS3B01G168400 chr4A 91.919 99 8 0 2169 2267 715189020 715189118 4.020000e-29 139.0
40 TraesCS3B01G168400 chr4A 84.906 106 14 2 1645 1748 473505370 473505475 4.080000e-19 106.0
41 TraesCS3B01G168400 chr4A 92.958 71 5 0 2081 2151 715188637 715188707 1.470000e-18 104.0
42 TraesCS3B01G168400 chr5A 89.000 400 25 7 2609 2992 452286302 452285906 7.500000e-131 477.0
43 TraesCS3B01G168400 chr5A 88.338 343 21 6 2280 2605 452286769 452286429 7.770000e-106 394.0
44 TraesCS3B01G168400 chr5A 83.275 287 32 8 187 459 84894167 84894451 1.780000e-62 250.0
45 TraesCS3B01G168400 chr5A 89.103 156 11 4 1998 2151 452287538 452287387 3.940000e-44 189.0
46 TraesCS3B01G168400 chr5A 93.878 98 6 0 2171 2268 452287074 452286977 6.680000e-32 148.0
47 TraesCS3B01G168400 chr5A 85.714 98 11 3 1650 1744 502684146 502684049 1.900000e-17 100.0
48 TraesCS3B01G168400 chr2D 85.683 461 51 5 2 459 588244046 588243598 3.490000e-129 472.0
49 TraesCS3B01G168400 chr2D 82.506 423 48 11 5 411 643464121 643464533 6.140000e-92 348.0
50 TraesCS3B01G168400 chr2D 81.481 162 23 6 187 346 91576121 91576277 3.130000e-25 126.0
51 TraesCS3B01G168400 chr2D 91.358 81 7 0 1665 1745 1947381 1947301 8.770000e-21 111.0
52 TraesCS3B01G168400 chr1D 85.646 418 39 8 44 459 253214391 253214789 1.280000e-113 420.0
53 TraesCS3B01G168400 chrUn 83.186 452 37 16 1093 1543 69368399 69368812 7.830000e-101 377.0
54 TraesCS3B01G168400 chr6A 82.675 456 46 13 1093 1543 55021929 55021502 1.010000e-99 374.0
55 TraesCS3B01G168400 chr6A 85.437 103 8 7 1646 1745 116823255 116823353 1.900000e-17 100.0
56 TraesCS3B01G168400 chr2B 87.308 260 29 3 3 259 416847653 416847911 8.110000e-76 294.0
57 TraesCS3B01G168400 chr2B 92.778 180 13 0 281 460 416856964 416857143 8.230000e-66 261.0
58 TraesCS3B01G168400 chr2B 88.667 150 15 2 283 431 748586008 748585860 6.590000e-42 182.0
59 TraesCS3B01G168400 chr6B 92.386 197 15 0 263 459 480371995 480372191 6.310000e-72 281.0
60 TraesCS3B01G168400 chr6B 89.888 89 7 2 1657 1745 10934428 10934514 2.440000e-21 113.0
61 TraesCS3B01G168400 chr4D 93.277 119 7 1 341 459 483859621 483859738 1.100000e-39 174.0
62 TraesCS3B01G168400 chr4D 85.827 127 15 1 3 126 483859168 483859294 6.730000e-27 132.0
63 TraesCS3B01G168400 chr4D 78.641 206 29 9 156 346 509604829 509605034 4.050000e-24 122.0
64 TraesCS3B01G168400 chr1B 83.929 168 16 7 300 457 633962967 633962801 1.860000e-32 150.0
65 TraesCS3B01G168400 chr4B 81.098 164 19 9 187 346 113166277 113166432 1.460000e-23 121.0
66 TraesCS3B01G168400 chr5B 80.117 171 22 9 187 346 83507154 83506985 1.880000e-22 117.0
67 TraesCS3B01G168400 chr5B 80.120 166 21 8 182 338 426686799 426686961 2.440000e-21 113.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G168400 chr3B 169258090 169261081 2991 False 5526.000000 5526 100.000000 1 2992 1 chr3B.!!$F1 2991
1 TraesCS3B01G168400 chr3B 444685810 444687254 1444 True 382.333333 721 88.324667 1918 2992 3 chr3B.!!$R2 1074
2 TraesCS3B01G168400 chr3B 252926061 252927503 1442 False 376.666667 721 88.014000 1920 2992 3 chr3B.!!$F2 1072
3 TraesCS3B01G168400 chr3A 112296595 112297511 916 False 527.500000 920 85.578000 883 1914 2 chr3A.!!$F1 1031
4 TraesCS3B01G168400 chr3D 115636796 115644171 7375 False 369.675000 918 91.667375 470 2992 8 chr3D.!!$F2 2522
5 TraesCS3B01G168400 chr7B 348970890 348971502 612 True 617.000000 617 85.714000 2265 2847 1 chr7B.!!$R2 582
6 TraesCS3B01G168400 chr7B 678540942 678542386 1444 True 380.333333 743 87.560333 1905 2992 3 chr7B.!!$R3 1087
7 TraesCS3B01G168400 chr7A 119297745 119301585 3840 True 444.000000 741 89.001750 2169 2992 4 chr7A.!!$R2 823
8 TraesCS3B01G168400 chr4A 715186867 715190071 3204 False 252.250000 610 88.652750 1906 2992 4 chr4A.!!$F2 1086
9 TraesCS3B01G168400 chr5A 452285906 452287538 1632 True 302.000000 477 90.079750 1998 2992 4 chr5A.!!$R2 994

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
161 162 0.033642 CTAGCCTAGCCTTAACCGCC 59.966 60.0 0.0 0.0 0.00 6.13 F
373 374 0.105778 CGAGCCCATTCCTTCTCTCC 59.894 60.0 0.0 0.0 0.00 3.71 F
385 386 0.178891 TTCTCTCCAGTGAGGCCCTT 60.179 55.0 0.0 0.0 39.23 3.95 F
1138 1334 0.457337 GCAGCATGGGAAAAAGAGCG 60.457 55.0 0.0 0.0 35.86 5.03 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1070 1262 0.676782 AGTTTGCTTCCCCGAATCCG 60.677 55.000 0.0 0.0 0.00 4.18 R
1184 1380 0.798776 CGCCGCTCTTTTCTGTCATT 59.201 50.000 0.0 0.0 0.00 2.57 R
1567 1769 0.949105 ACGAACCACGATGCCAGAAC 60.949 55.000 0.0 0.0 45.77 3.01 R
2253 10825 2.111878 ATGAGTATGCCGCTGCCC 59.888 61.111 0.0 0.0 36.33 5.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 2.580867 GCAGCTAGCCGACAGTCG 60.581 66.667 16.50 16.50 40.07 4.18
24 25 3.052620 GCAGCTAGCCGACAGTCGA 62.053 63.158 24.88 3.45 43.74 4.20
25 26 1.226435 CAGCTAGCCGACAGTCGAC 60.226 63.158 24.88 13.44 43.74 4.20
26 27 1.377463 AGCTAGCCGACAGTCGACT 60.377 57.895 24.88 20.54 43.74 4.18
28 29 1.645704 GCTAGCCGACAGTCGACTGA 61.646 60.000 43.55 23.89 46.59 3.41
29 30 0.803117 CTAGCCGACAGTCGACTGAA 59.197 55.000 43.55 22.69 46.59 3.02
30 31 1.199327 CTAGCCGACAGTCGACTGAAA 59.801 52.381 43.55 22.98 46.59 2.69
31 32 0.603569 AGCCGACAGTCGACTGAAAT 59.396 50.000 43.55 26.73 46.59 2.17
32 33 1.000955 AGCCGACAGTCGACTGAAATT 59.999 47.619 43.55 26.38 46.59 1.82
33 34 1.798813 GCCGACAGTCGACTGAAATTT 59.201 47.619 43.55 26.01 46.59 1.82
34 35 2.411547 GCCGACAGTCGACTGAAATTTG 60.412 50.000 43.55 27.18 46.59 2.32
35 36 3.057019 CCGACAGTCGACTGAAATTTGA 58.943 45.455 43.55 0.00 46.59 2.69
36 37 3.493129 CCGACAGTCGACTGAAATTTGAA 59.507 43.478 43.55 0.00 46.59 2.69
37 38 4.025229 CCGACAGTCGACTGAAATTTGAAA 60.025 41.667 43.55 0.00 46.59 2.69
38 39 5.498159 CGACAGTCGACTGAAATTTGAAAA 58.502 37.500 43.55 0.00 46.59 2.29
39 40 5.963004 CGACAGTCGACTGAAATTTGAAAAA 59.037 36.000 43.55 0.00 46.59 1.94
40 41 6.139169 CGACAGTCGACTGAAATTTGAAAAAG 59.861 38.462 43.55 18.44 46.59 2.27
41 42 6.265577 ACAGTCGACTGAAATTTGAAAAAGG 58.734 36.000 43.55 17.83 46.59 3.11
42 43 6.127730 ACAGTCGACTGAAATTTGAAAAAGGT 60.128 34.615 43.55 18.50 46.59 3.50
43 44 6.414987 CAGTCGACTGAAATTTGAAAAAGGTC 59.585 38.462 36.73 0.00 46.59 3.85
44 45 6.094881 AGTCGACTGAAATTTGAAAAAGGTCA 59.905 34.615 19.30 0.00 0.00 4.02
45 46 6.414987 GTCGACTGAAATTTGAAAAAGGTCAG 59.585 38.462 8.70 11.20 37.59 3.51
46 47 6.094881 TCGACTGAAATTTGAAAAAGGTCAGT 59.905 34.615 15.51 15.51 45.08 3.41
48 49 7.169158 ACTGAAATTTGAAAAAGGTCAGTCA 57.831 32.000 0.00 0.00 39.97 3.41
49 50 7.610865 ACTGAAATTTGAAAAAGGTCAGTCAA 58.389 30.769 0.00 0.00 39.97 3.18
50 51 8.260114 ACTGAAATTTGAAAAAGGTCAGTCAAT 58.740 29.630 0.00 0.00 39.97 2.57
51 52 9.101655 CTGAAATTTGAAAAAGGTCAGTCAATT 57.898 29.630 0.00 0.00 30.51 2.32
52 53 9.447157 TGAAATTTGAAAAAGGTCAGTCAATTT 57.553 25.926 0.00 0.00 32.25 1.82
55 56 7.841915 TTTGAAAAAGGTCAGTCAATTTTCC 57.158 32.000 0.00 0.00 38.55 3.13
56 57 6.790232 TGAAAAAGGTCAGTCAATTTTCCT 57.210 33.333 0.00 0.00 38.55 3.36
57 58 7.181569 TGAAAAAGGTCAGTCAATTTTCCTT 57.818 32.000 0.00 0.00 38.55 3.36
58 59 7.264947 TGAAAAAGGTCAGTCAATTTTCCTTC 58.735 34.615 0.00 0.00 38.55 3.46
59 60 7.124147 TGAAAAAGGTCAGTCAATTTTCCTTCT 59.876 33.333 0.00 0.00 38.55 2.85
60 61 6.396829 AAAGGTCAGTCAATTTTCCTTCTG 57.603 37.500 0.00 0.00 34.73 3.02
61 62 5.053978 AGGTCAGTCAATTTTCCTTCTGT 57.946 39.130 0.00 0.00 0.00 3.41
62 63 5.066593 AGGTCAGTCAATTTTCCTTCTGTC 58.933 41.667 0.00 0.00 0.00 3.51
63 64 5.066593 GGTCAGTCAATTTTCCTTCTGTCT 58.933 41.667 0.00 0.00 0.00 3.41
64 65 5.180304 GGTCAGTCAATTTTCCTTCTGTCTC 59.820 44.000 0.00 0.00 0.00 3.36
65 66 5.760253 GTCAGTCAATTTTCCTTCTGTCTCA 59.240 40.000 0.00 0.00 0.00 3.27
66 67 6.260936 GTCAGTCAATTTTCCTTCTGTCTCAA 59.739 38.462 0.00 0.00 0.00 3.02
67 68 6.260936 TCAGTCAATTTTCCTTCTGTCTCAAC 59.739 38.462 0.00 0.00 0.00 3.18
68 69 6.261826 CAGTCAATTTTCCTTCTGTCTCAACT 59.738 38.462 0.00 0.00 0.00 3.16
69 70 6.261826 AGTCAATTTTCCTTCTGTCTCAACTG 59.738 38.462 0.00 0.00 0.00 3.16
70 71 6.038714 GTCAATTTTCCTTCTGTCTCAACTGT 59.961 38.462 0.00 0.00 0.00 3.55
71 72 6.603201 TCAATTTTCCTTCTGTCTCAACTGTT 59.397 34.615 0.00 0.00 0.00 3.16
72 73 7.122650 TCAATTTTCCTTCTGTCTCAACTGTTT 59.877 33.333 0.00 0.00 0.00 2.83
73 74 5.818136 TTTCCTTCTGTCTCAACTGTTTG 57.182 39.130 0.00 0.00 0.00 2.93
74 75 4.753516 TCCTTCTGTCTCAACTGTTTGA 57.246 40.909 0.00 0.00 39.55 2.69
75 76 5.296151 TCCTTCTGTCTCAACTGTTTGAT 57.704 39.130 0.00 0.00 41.05 2.57
76 77 5.300752 TCCTTCTGTCTCAACTGTTTGATC 58.699 41.667 0.00 0.00 41.05 2.92
77 78 5.059161 CCTTCTGTCTCAACTGTTTGATCA 58.941 41.667 0.00 0.00 41.05 2.92
78 79 5.528690 CCTTCTGTCTCAACTGTTTGATCAA 59.471 40.000 3.38 3.38 41.05 2.57
79 80 6.293298 CCTTCTGTCTCAACTGTTTGATCAAG 60.293 42.308 8.41 0.00 41.05 3.02
80 81 5.917462 TCTGTCTCAACTGTTTGATCAAGA 58.083 37.500 8.41 0.59 41.05 3.02
81 82 6.528321 TCTGTCTCAACTGTTTGATCAAGAT 58.472 36.000 8.41 0.00 41.05 2.40
82 83 6.648310 TCTGTCTCAACTGTTTGATCAAGATC 59.352 38.462 8.41 3.12 41.05 2.75
83 84 5.702670 TGTCTCAACTGTTTGATCAAGATCC 59.297 40.000 8.41 0.00 41.05 3.36
84 85 5.702670 GTCTCAACTGTTTGATCAAGATCCA 59.297 40.000 8.41 4.01 41.05 3.41
85 86 6.205464 GTCTCAACTGTTTGATCAAGATCCAA 59.795 38.462 8.41 0.43 41.05 3.53
86 87 6.205464 TCTCAACTGTTTGATCAAGATCCAAC 59.795 38.462 16.02 16.02 41.05 3.77
87 88 5.827267 TCAACTGTTTGATCAAGATCCAACA 59.173 36.000 21.28 21.28 45.38 3.33
90 91 5.947228 TGTTTGATCAAGATCCAACAGAC 57.053 39.130 19.69 0.67 43.84 3.51
91 92 4.452114 TGTTTGATCAAGATCCAACAGACG 59.548 41.667 19.69 0.00 43.84 4.18
92 93 3.961480 TGATCAAGATCCAACAGACGT 57.039 42.857 7.54 0.00 37.02 4.34
93 94 3.849911 TGATCAAGATCCAACAGACGTC 58.150 45.455 7.70 7.70 37.02 4.34
94 95 2.347697 TCAAGATCCAACAGACGTCG 57.652 50.000 10.46 7.86 0.00 5.12
95 96 1.611977 TCAAGATCCAACAGACGTCGT 59.388 47.619 10.46 8.54 0.00 4.34
96 97 2.035449 TCAAGATCCAACAGACGTCGTT 59.965 45.455 16.42 16.42 0.00 3.85
97 98 2.349297 AGATCCAACAGACGTCGTTC 57.651 50.000 18.42 10.62 0.00 3.95
98 99 0.982673 GATCCAACAGACGTCGTTCG 59.017 55.000 18.42 14.13 46.00 3.95
109 110 2.813301 CGTCGTTCGTCTTCAACTTC 57.187 50.000 0.00 0.00 34.52 3.01
110 111 2.382519 CGTCGTTCGTCTTCAACTTCT 58.617 47.619 0.00 0.00 34.52 2.85
111 112 2.787680 CGTCGTTCGTCTTCAACTTCTT 59.212 45.455 0.00 0.00 34.52 2.52
112 113 3.360765 CGTCGTTCGTCTTCAACTTCTTG 60.361 47.826 0.00 0.00 34.52 3.02
113 114 2.538449 TCGTTCGTCTTCAACTTCTTGC 59.462 45.455 0.00 0.00 0.00 4.01
114 115 2.348591 CGTTCGTCTTCAACTTCTTGCC 60.349 50.000 0.00 0.00 0.00 4.52
115 116 2.872858 GTTCGTCTTCAACTTCTTGCCT 59.127 45.455 0.00 0.00 0.00 4.75
116 117 3.194005 TCGTCTTCAACTTCTTGCCTT 57.806 42.857 0.00 0.00 0.00 4.35
117 118 3.541632 TCGTCTTCAACTTCTTGCCTTT 58.458 40.909 0.00 0.00 0.00 3.11
118 119 3.945285 TCGTCTTCAACTTCTTGCCTTTT 59.055 39.130 0.00 0.00 0.00 2.27
119 120 4.035208 TCGTCTTCAACTTCTTGCCTTTTC 59.965 41.667 0.00 0.00 0.00 2.29
120 121 4.035675 CGTCTTCAACTTCTTGCCTTTTCT 59.964 41.667 0.00 0.00 0.00 2.52
121 122 5.449177 CGTCTTCAACTTCTTGCCTTTTCTT 60.449 40.000 0.00 0.00 0.00 2.52
122 123 5.974158 GTCTTCAACTTCTTGCCTTTTCTTC 59.026 40.000 0.00 0.00 0.00 2.87
123 124 4.918810 TCAACTTCTTGCCTTTTCTTCC 57.081 40.909 0.00 0.00 0.00 3.46
124 125 4.536765 TCAACTTCTTGCCTTTTCTTCCT 58.463 39.130 0.00 0.00 0.00 3.36
125 126 4.580580 TCAACTTCTTGCCTTTTCTTCCTC 59.419 41.667 0.00 0.00 0.00 3.71
126 127 4.445557 ACTTCTTGCCTTTTCTTCCTCT 57.554 40.909 0.00 0.00 0.00 3.69
127 128 4.393834 ACTTCTTGCCTTTTCTTCCTCTC 58.606 43.478 0.00 0.00 0.00 3.20
128 129 3.045601 TCTTGCCTTTTCTTCCTCTCG 57.954 47.619 0.00 0.00 0.00 4.04
129 130 2.368875 TCTTGCCTTTTCTTCCTCTCGT 59.631 45.455 0.00 0.00 0.00 4.18
130 131 2.169832 TGCCTTTTCTTCCTCTCGTG 57.830 50.000 0.00 0.00 0.00 4.35
131 132 0.799393 GCCTTTTCTTCCTCTCGTGC 59.201 55.000 0.00 0.00 0.00 5.34
132 133 1.878102 GCCTTTTCTTCCTCTCGTGCA 60.878 52.381 0.00 0.00 0.00 4.57
133 134 1.801178 CCTTTTCTTCCTCTCGTGCAC 59.199 52.381 6.82 6.82 0.00 4.57
134 135 1.457303 CTTTTCTTCCTCTCGTGCACG 59.543 52.381 32.76 32.76 41.45 5.34
135 136 0.944311 TTTCTTCCTCTCGTGCACGC 60.944 55.000 33.63 0.00 39.60 5.34
136 137 3.175240 CTTCCTCTCGTGCACGCG 61.175 66.667 33.63 28.15 39.60 6.01
145 146 3.323136 GTGCACGCGCCGATCTAG 61.323 66.667 5.73 0.00 37.32 2.43
148 149 4.271816 CACGCGCCGATCTAGCCT 62.272 66.667 5.73 0.00 0.00 4.58
149 150 2.593725 ACGCGCCGATCTAGCCTA 60.594 61.111 5.73 0.00 0.00 3.93
150 151 2.177038 CGCGCCGATCTAGCCTAG 59.823 66.667 0.00 0.00 0.00 3.02
151 152 2.126267 GCGCCGATCTAGCCTAGC 60.126 66.667 0.00 0.00 0.00 3.42
152 153 2.569134 CGCCGATCTAGCCTAGCC 59.431 66.667 0.00 0.00 0.00 3.93
153 154 1.974343 CGCCGATCTAGCCTAGCCT 60.974 63.158 0.00 0.00 0.00 4.58
154 155 1.528292 CGCCGATCTAGCCTAGCCTT 61.528 60.000 0.00 0.00 0.00 4.35
155 156 1.546961 GCCGATCTAGCCTAGCCTTA 58.453 55.000 0.00 0.00 0.00 2.69
156 157 1.893801 GCCGATCTAGCCTAGCCTTAA 59.106 52.381 0.00 0.00 0.00 1.85
157 158 2.352912 GCCGATCTAGCCTAGCCTTAAC 60.353 54.545 0.00 0.00 0.00 2.01
158 159 2.231721 CCGATCTAGCCTAGCCTTAACC 59.768 54.545 0.00 0.00 0.00 2.85
159 160 2.095161 CGATCTAGCCTAGCCTTAACCG 60.095 54.545 0.00 0.00 0.00 4.44
160 161 1.038280 TCTAGCCTAGCCTTAACCGC 58.962 55.000 0.00 0.00 0.00 5.68
161 162 0.033642 CTAGCCTAGCCTTAACCGCC 59.966 60.000 0.00 0.00 0.00 6.13
162 163 1.741327 TAGCCTAGCCTTAACCGCCG 61.741 60.000 0.00 0.00 0.00 6.46
163 164 2.108362 CCTAGCCTTAACCGCCGG 59.892 66.667 0.00 0.00 0.00 6.13
164 165 2.588034 CTAGCCTTAACCGCCGGC 60.588 66.667 19.07 19.07 44.09 6.13
165 166 4.165486 TAGCCTTAACCGCCGGCC 62.165 66.667 23.46 3.47 44.84 6.13
168 169 4.851179 CCTTAACCGCCGGCCCTC 62.851 72.222 23.46 0.00 0.00 4.30
206 207 3.012722 CGCCCCACCCTTCCCTAA 61.013 66.667 0.00 0.00 0.00 2.69
207 208 2.608550 CGCCCCACCCTTCCCTAAA 61.609 63.158 0.00 0.00 0.00 1.85
208 209 1.933307 CGCCCCACCCTTCCCTAAAT 61.933 60.000 0.00 0.00 0.00 1.40
209 210 0.338467 GCCCCACCCTTCCCTAAATT 59.662 55.000 0.00 0.00 0.00 1.82
210 211 1.571936 GCCCCACCCTTCCCTAAATTA 59.428 52.381 0.00 0.00 0.00 1.40
211 212 2.688817 GCCCCACCCTTCCCTAAATTAC 60.689 54.545 0.00 0.00 0.00 1.89
212 213 2.091499 CCCCACCCTTCCCTAAATTACC 60.091 54.545 0.00 0.00 0.00 2.85
213 214 2.091499 CCCACCCTTCCCTAAATTACCC 60.091 54.545 0.00 0.00 0.00 3.69
214 215 2.091499 CCACCCTTCCCTAAATTACCCC 60.091 54.545 0.00 0.00 0.00 4.95
215 216 2.091499 CACCCTTCCCTAAATTACCCCC 60.091 54.545 0.00 0.00 0.00 5.40
251 252 2.448542 GCCCTGGCCATCCCTCTA 60.449 66.667 5.51 0.00 34.56 2.43
252 253 2.524204 GCCCTGGCCATCCCTCTAG 61.524 68.421 5.51 0.00 34.56 2.43
253 254 1.845205 CCCTGGCCATCCCTCTAGG 60.845 68.421 5.51 0.00 0.00 3.02
273 274 4.452733 CCCCCGACACCGAGCTTC 62.453 72.222 0.00 0.00 38.22 3.86
274 275 3.382832 CCCCGACACCGAGCTTCT 61.383 66.667 0.00 0.00 38.22 2.85
275 276 2.657237 CCCGACACCGAGCTTCTT 59.343 61.111 0.00 0.00 38.22 2.52
276 277 1.446272 CCCGACACCGAGCTTCTTC 60.446 63.158 0.00 0.00 38.22 2.87
277 278 1.587054 CCGACACCGAGCTTCTTCT 59.413 57.895 0.00 0.00 38.22 2.85
278 279 0.456995 CCGACACCGAGCTTCTTCTC 60.457 60.000 0.00 0.00 38.22 2.87
284 285 2.982130 GAGCTTCTTCTCGGGCCA 59.018 61.111 4.39 0.00 0.00 5.36
285 286 1.448717 GAGCTTCTTCTCGGGCCAC 60.449 63.158 4.39 0.00 0.00 5.01
286 287 1.893919 GAGCTTCTTCTCGGGCCACT 61.894 60.000 4.39 0.00 0.00 4.00
287 288 1.743252 GCTTCTTCTCGGGCCACTG 60.743 63.158 4.39 0.00 0.00 3.66
288 289 1.743252 CTTCTTCTCGGGCCACTGC 60.743 63.158 4.39 0.00 0.00 4.40
329 330 2.126372 CCCCCACCCTGAACCCTA 59.874 66.667 0.00 0.00 0.00 3.53
330 331 1.542881 CCCCCACCCTGAACCCTAA 60.543 63.158 0.00 0.00 0.00 2.69
331 332 1.143970 CCCCCACCCTGAACCCTAAA 61.144 60.000 0.00 0.00 0.00 1.85
332 333 0.781278 CCCCACCCTGAACCCTAAAA 59.219 55.000 0.00 0.00 0.00 1.52
333 334 1.361197 CCCCACCCTGAACCCTAAAAT 59.639 52.381 0.00 0.00 0.00 1.82
334 335 2.583566 CCCCACCCTGAACCCTAAAATA 59.416 50.000 0.00 0.00 0.00 1.40
335 336 3.372675 CCCCACCCTGAACCCTAAAATAG 60.373 52.174 0.00 0.00 0.00 1.73
336 337 3.526019 CCCACCCTGAACCCTAAAATAGA 59.474 47.826 0.00 0.00 0.00 1.98
337 338 4.168088 CCCACCCTGAACCCTAAAATAGAT 59.832 45.833 0.00 0.00 0.00 1.98
338 339 5.133221 CCACCCTGAACCCTAAAATAGATG 58.867 45.833 0.00 0.00 0.00 2.90
339 340 5.104109 CCACCCTGAACCCTAAAATAGATGA 60.104 44.000 0.00 0.00 0.00 2.92
340 341 6.410853 CCACCCTGAACCCTAAAATAGATGAT 60.411 42.308 0.00 0.00 0.00 2.45
341 342 6.488006 CACCCTGAACCCTAAAATAGATGATG 59.512 42.308 0.00 0.00 0.00 3.07
342 343 6.006449 CCCTGAACCCTAAAATAGATGATGG 58.994 44.000 0.00 0.00 0.00 3.51
343 344 6.006449 CCTGAACCCTAAAATAGATGATGGG 58.994 44.000 0.00 0.00 39.06 4.00
344 345 5.952387 TGAACCCTAAAATAGATGATGGGG 58.048 41.667 0.00 0.00 37.56 4.96
345 346 5.435041 TGAACCCTAAAATAGATGATGGGGT 59.565 40.000 0.00 0.00 46.51 4.95
346 347 5.324832 ACCCTAAAATAGATGATGGGGTG 57.675 43.478 0.00 0.00 43.39 4.61
347 348 4.981647 ACCCTAAAATAGATGATGGGGTGA 59.018 41.667 0.00 0.00 43.39 4.02
348 349 5.616986 ACCCTAAAATAGATGATGGGGTGAT 59.383 40.000 0.00 0.00 43.39 3.06
349 350 5.948162 CCCTAAAATAGATGATGGGGTGATG 59.052 44.000 0.00 0.00 0.00 3.07
350 351 6.240263 CCCTAAAATAGATGATGGGGTGATGA 60.240 42.308 0.00 0.00 0.00 2.92
351 352 6.656693 CCTAAAATAGATGATGGGGTGATGAC 59.343 42.308 0.00 0.00 0.00 3.06
352 353 3.969287 ATAGATGATGGGGTGATGACG 57.031 47.619 0.00 0.00 0.00 4.35
353 354 0.761187 AGATGATGGGGTGATGACGG 59.239 55.000 0.00 0.00 0.00 4.79
354 355 0.886490 GATGATGGGGTGATGACGGC 60.886 60.000 0.00 0.00 0.00 5.68
355 356 2.588877 GATGGGGTGATGACGGCG 60.589 66.667 4.80 4.80 0.00 6.46
356 357 3.080765 ATGGGGTGATGACGGCGA 61.081 61.111 16.62 0.00 0.00 5.54
357 358 2.978452 GATGGGGTGATGACGGCGAG 62.978 65.000 16.62 0.00 0.00 5.03
361 362 4.451150 GTGATGACGGCGAGCCCA 62.451 66.667 16.62 6.19 0.00 5.36
362 363 3.469970 TGATGACGGCGAGCCCAT 61.470 61.111 16.62 11.10 0.00 4.00
363 364 2.203070 GATGACGGCGAGCCCATT 60.203 61.111 16.62 0.00 0.00 3.16
364 365 2.203070 ATGACGGCGAGCCCATTC 60.203 61.111 16.62 0.00 0.00 2.67
365 366 3.757248 ATGACGGCGAGCCCATTCC 62.757 63.158 16.62 0.00 0.00 3.01
366 367 4.162690 GACGGCGAGCCCATTCCT 62.163 66.667 16.62 0.00 0.00 3.36
367 368 3.682292 GACGGCGAGCCCATTCCTT 62.682 63.158 16.62 0.00 0.00 3.36
368 369 2.897350 CGGCGAGCCCATTCCTTC 60.897 66.667 0.00 0.00 0.00 3.46
369 370 2.592308 GGCGAGCCCATTCCTTCT 59.408 61.111 1.97 0.00 0.00 2.85
370 371 1.524849 GGCGAGCCCATTCCTTCTC 60.525 63.158 1.97 0.00 0.00 2.87
371 372 1.524482 GCGAGCCCATTCCTTCTCT 59.476 57.895 0.00 0.00 0.00 3.10
372 373 0.531753 GCGAGCCCATTCCTTCTCTC 60.532 60.000 0.00 0.00 0.00 3.20
373 374 0.105778 CGAGCCCATTCCTTCTCTCC 59.894 60.000 0.00 0.00 0.00 3.71
374 375 1.207791 GAGCCCATTCCTTCTCTCCA 58.792 55.000 0.00 0.00 0.00 3.86
375 376 1.140652 GAGCCCATTCCTTCTCTCCAG 59.859 57.143 0.00 0.00 0.00 3.86
376 377 0.915364 GCCCATTCCTTCTCTCCAGT 59.085 55.000 0.00 0.00 0.00 4.00
377 378 1.407989 GCCCATTCCTTCTCTCCAGTG 60.408 57.143 0.00 0.00 0.00 3.66
378 379 2.191400 CCCATTCCTTCTCTCCAGTGA 58.809 52.381 0.00 0.00 0.00 3.41
379 380 2.170187 CCCATTCCTTCTCTCCAGTGAG 59.830 54.545 0.00 0.00 40.17 3.51
380 381 2.170187 CCATTCCTTCTCTCCAGTGAGG 59.830 54.545 0.00 0.00 39.23 3.86
381 382 1.270907 TTCCTTCTCTCCAGTGAGGC 58.729 55.000 0.00 0.00 39.23 4.70
382 383 0.616111 TCCTTCTCTCCAGTGAGGCC 60.616 60.000 0.00 0.00 39.23 5.19
383 384 1.621672 CCTTCTCTCCAGTGAGGCCC 61.622 65.000 0.00 0.00 39.23 5.80
384 385 0.617249 CTTCTCTCCAGTGAGGCCCT 60.617 60.000 0.00 0.00 39.23 5.19
385 386 0.178891 TTCTCTCCAGTGAGGCCCTT 60.179 55.000 0.00 0.00 39.23 3.95
386 387 0.616111 TCTCTCCAGTGAGGCCCTTC 60.616 60.000 0.00 0.00 39.23 3.46
387 388 1.613630 TCTCCAGTGAGGCCCTTCC 60.614 63.158 0.00 0.00 39.23 3.46
396 397 2.703405 AGGCCCTTCCTTCTCCTTC 58.297 57.895 0.00 0.00 44.75 3.46
397 398 0.916845 AGGCCCTTCCTTCTCCTTCC 60.917 60.000 0.00 0.00 44.75 3.46
398 399 1.208165 GGCCCTTCCTTCTCCTTCCA 61.208 60.000 0.00 0.00 0.00 3.53
399 400 0.922626 GCCCTTCCTTCTCCTTCCAT 59.077 55.000 0.00 0.00 0.00 3.41
400 401 1.409381 GCCCTTCCTTCTCCTTCCATG 60.409 57.143 0.00 0.00 0.00 3.66
401 402 2.200081 CCCTTCCTTCTCCTTCCATGA 58.800 52.381 0.00 0.00 0.00 3.07
402 403 2.782341 CCCTTCCTTCTCCTTCCATGAT 59.218 50.000 0.00 0.00 0.00 2.45
403 404 3.203934 CCCTTCCTTCTCCTTCCATGATT 59.796 47.826 0.00 0.00 0.00 2.57
404 405 4.459330 CCTTCCTTCTCCTTCCATGATTC 58.541 47.826 0.00 0.00 0.00 2.52
405 406 3.827008 TCCTTCTCCTTCCATGATTCG 57.173 47.619 0.00 0.00 0.00 3.34
406 407 3.374764 TCCTTCTCCTTCCATGATTCGA 58.625 45.455 0.00 0.00 0.00 3.71
407 408 3.774766 TCCTTCTCCTTCCATGATTCGAA 59.225 43.478 0.00 0.00 0.00 3.71
408 409 4.225042 TCCTTCTCCTTCCATGATTCGAAA 59.775 41.667 0.00 0.00 0.00 3.46
409 410 4.943705 CCTTCTCCTTCCATGATTCGAAAA 59.056 41.667 0.00 0.00 0.00 2.29
410 411 5.591877 CCTTCTCCTTCCATGATTCGAAAAT 59.408 40.000 0.00 0.00 0.00 1.82
411 412 6.238593 CCTTCTCCTTCCATGATTCGAAAATC 60.239 42.308 0.00 0.00 41.48 2.17
412 413 4.811024 TCTCCTTCCATGATTCGAAAATCG 59.189 41.667 0.00 0.00 43.61 3.34
422 423 2.823924 TCGAAAATCGACTGACCCAA 57.176 45.000 0.00 0.00 44.82 4.12
423 424 3.114668 TCGAAAATCGACTGACCCAAA 57.885 42.857 0.00 0.00 44.82 3.28
424 425 2.803956 TCGAAAATCGACTGACCCAAAC 59.196 45.455 0.00 0.00 44.82 2.93
425 426 2.806244 CGAAAATCGACTGACCCAAACT 59.194 45.455 0.00 0.00 43.74 2.66
426 427 3.120649 CGAAAATCGACTGACCCAAACTC 60.121 47.826 0.00 0.00 43.74 3.01
427 428 2.080286 AATCGACTGACCCAAACTCG 57.920 50.000 0.00 0.00 0.00 4.18
428 429 1.254026 ATCGACTGACCCAAACTCGA 58.746 50.000 0.00 0.00 37.74 4.04
429 430 1.034356 TCGACTGACCCAAACTCGAA 58.966 50.000 0.00 0.00 30.73 3.71
430 431 1.409790 TCGACTGACCCAAACTCGAAA 59.590 47.619 0.00 0.00 30.73 3.46
431 432 2.159071 TCGACTGACCCAAACTCGAAAA 60.159 45.455 0.00 0.00 30.73 2.29
432 433 2.221055 CGACTGACCCAAACTCGAAAAG 59.779 50.000 0.00 0.00 0.00 2.27
433 434 3.203716 GACTGACCCAAACTCGAAAAGT 58.796 45.455 0.00 0.00 41.10 2.66
434 435 3.203716 ACTGACCCAAACTCGAAAAGTC 58.796 45.455 0.00 0.00 37.17 3.01
435 436 3.202906 CTGACCCAAACTCGAAAAGTCA 58.797 45.455 0.00 0.00 37.17 3.41
436 437 3.202906 TGACCCAAACTCGAAAAGTCAG 58.797 45.455 0.00 0.00 37.17 3.51
437 438 3.203716 GACCCAAACTCGAAAAGTCAGT 58.796 45.455 0.00 0.00 37.17 3.41
438 439 3.203716 ACCCAAACTCGAAAAGTCAGTC 58.796 45.455 0.00 0.00 37.17 3.51
439 440 2.221055 CCCAAACTCGAAAAGTCAGTCG 59.779 50.000 0.00 0.00 37.17 4.18
440 441 2.221055 CCAAACTCGAAAAGTCAGTCGG 59.779 50.000 0.00 0.00 37.17 4.79
441 442 1.499049 AACTCGAAAAGTCAGTCGGC 58.501 50.000 0.00 0.00 37.17 5.54
442 443 0.674534 ACTCGAAAAGTCAGTCGGCT 59.325 50.000 0.00 0.00 37.84 5.52
443 444 1.063806 CTCGAAAAGTCAGTCGGCTG 58.936 55.000 11.77 11.77 43.87 4.85
457 458 6.517914 CAGTCGGCTGAAATCTAGATAAAC 57.482 41.667 12.86 1.55 45.28 2.01
458 459 6.276847 CAGTCGGCTGAAATCTAGATAAACT 58.723 40.000 12.86 0.00 45.28 2.66
459 460 7.426410 CAGTCGGCTGAAATCTAGATAAACTA 58.574 38.462 12.86 0.00 45.28 2.24
460 461 7.593273 CAGTCGGCTGAAATCTAGATAAACTAG 59.407 40.741 12.86 2.37 45.19 2.57
461 462 6.363896 GTCGGCTGAAATCTAGATAAACTAGC 59.636 42.308 5.46 11.25 45.78 3.42
462 463 5.635700 CGGCTGAAATCTAGATAAACTAGCC 59.364 44.000 23.19 23.19 45.78 3.93
463 464 6.525629 GGCTGAAATCTAGATAAACTAGCCA 58.474 40.000 25.68 10.11 45.78 4.75
464 465 6.992715 GGCTGAAATCTAGATAAACTAGCCAA 59.007 38.462 25.68 0.00 45.78 4.52
465 466 7.041712 GGCTGAAATCTAGATAAACTAGCCAAC 60.042 40.741 25.68 10.88 45.78 3.77
466 467 7.495934 GCTGAAATCTAGATAAACTAGCCAACA 59.504 37.037 5.46 0.00 45.78 3.33
467 468 9.553064 CTGAAATCTAGATAAACTAGCCAACAT 57.447 33.333 5.46 0.00 45.78 2.71
514 515 2.034053 TCCGTCCAAACACATTTTCAGC 59.966 45.455 0.00 0.00 0.00 4.26
516 517 3.490761 CCGTCCAAACACATTTTCAGCTT 60.491 43.478 0.00 0.00 0.00 3.74
530 531 7.439056 ACATTTTCAGCTTAAATTTGTGTCAGG 59.561 33.333 0.00 0.00 0.00 3.86
559 560 0.892358 ACGAGTCCGCTAGGTGTTCA 60.892 55.000 0.00 0.00 39.95 3.18
568 569 1.610886 GCTAGGTGTTCACCTTGGGAC 60.611 57.143 26.22 10.62 41.12 4.46
587 588 1.176527 CCGTGCTTTGACCATCCAAT 58.823 50.000 0.00 0.00 0.00 3.16
605 606 3.699038 CCAATGTGTTCGGATATGGGTTT 59.301 43.478 0.00 0.00 0.00 3.27
616 617 4.024893 CGGATATGGGTTTGAAACGATGAG 60.025 45.833 1.53 0.00 0.00 2.90
630 631 1.640428 GATGAGCGTTCGAATGTGGA 58.360 50.000 18.22 3.40 0.00 4.02
660 661 1.001378 CGTGGGAAGGCTTGACAAAAG 60.001 52.381 3.46 0.00 0.00 2.27
662 663 0.969149 GGGAAGGCTTGACAAAAGGG 59.031 55.000 3.46 0.00 0.00 3.95
667 668 4.383661 GGAAGGCTTGACAAAAGGGAAAAA 60.384 41.667 3.46 0.00 0.00 1.94
730 732 6.825610 TGGATTTTGAAAACAACCATAGCTT 58.174 32.000 0.00 0.00 0.00 3.74
731 733 6.928492 TGGATTTTGAAAACAACCATAGCTTC 59.072 34.615 0.00 0.00 0.00 3.86
798 800 7.143340 TCCGGAATCGTGTCTATTTTATACTG 58.857 38.462 0.00 0.00 33.95 2.74
807 809 9.246423 CGTGTCTATTTTATACTGTTTTTGACG 57.754 33.333 0.00 0.00 0.00 4.35
809 811 8.723311 TGTCTATTTTATACTGTTTTTGACGGG 58.277 33.333 0.00 0.00 39.05 5.28
811 813 9.504708 TCTATTTTATACTGTTTTTGACGGGAA 57.495 29.630 0.00 0.00 39.05 3.97
833 835 8.905850 GGGAACCGGAAATTGTATCTATTTTAA 58.094 33.333 9.46 0.00 40.86 1.52
834 836 9.946165 GGAACCGGAAATTGTATCTATTTTAAG 57.054 33.333 9.46 0.00 0.00 1.85
1034 1226 3.051392 GCGGGGATTTGTGGAAGCG 62.051 63.158 0.00 0.00 0.00 4.68
1037 1229 1.253100 GGGGATTTGTGGAAGCGAAA 58.747 50.000 0.00 0.00 0.00 3.46
1129 1325 2.507452 CATCGAGGCAGCATGGGA 59.493 61.111 0.00 0.00 35.86 4.37
1138 1334 0.457337 GCAGCATGGGAAAAAGAGCG 60.457 55.000 0.00 0.00 35.86 5.03
1147 1343 1.798813 GGAAAAAGAGCGAGCTCGAAA 59.201 47.619 38.74 0.00 46.90 3.46
1168 1364 3.744719 GGGAAAAAGGCCGCCGTC 61.745 66.667 3.05 0.40 0.00 4.79
1169 1365 4.097863 GGAAAAAGGCCGCCGTCG 62.098 66.667 3.05 0.00 0.00 5.12
1170 1366 4.753877 GAAAAAGGCCGCCGTCGC 62.754 66.667 3.05 0.00 0.00 5.19
1213 1409 4.854784 GAGCGGCGCGATGAGACA 62.855 66.667 27.59 0.00 0.00 3.41
1355 1557 1.982938 AGGCTCCACACCTACGACC 60.983 63.158 0.00 0.00 35.10 4.79
1359 1561 0.611062 CTCCACACCTACGACCAGGA 60.611 60.000 9.02 0.00 39.18 3.86
1363 1565 1.275291 CACACCTACGACCAGGACAAT 59.725 52.381 9.02 0.00 39.18 2.71
1379 1581 2.808543 GACAATGAGTGGAAGAAGCGTT 59.191 45.455 0.00 0.00 0.00 4.84
1381 1583 3.003689 ACAATGAGTGGAAGAAGCGTTTG 59.996 43.478 0.00 0.00 0.00 2.93
1427 1629 2.022195 CTCCCAAGCACATCATGGAAG 58.978 52.381 0.00 0.00 35.62 3.46
1516 1718 7.636150 ATTGATCGAGGTGAAATCAGATTTT 57.364 32.000 9.84 0.00 31.50 1.82
1567 1769 1.164041 GGGTGTGGTGTTCGTCCTTG 61.164 60.000 0.00 0.00 0.00 3.61
1570 1772 1.329599 GTGTGGTGTTCGTCCTTGTTC 59.670 52.381 0.00 0.00 0.00 3.18
1659 1861 4.436852 CCTGTCGTATTTGCGCTGTTTATT 60.437 41.667 9.73 0.00 0.00 1.40
1660 1862 5.220510 CCTGTCGTATTTGCGCTGTTTATTA 60.221 40.000 9.73 0.00 0.00 0.98
1661 1863 5.552807 TGTCGTATTTGCGCTGTTTATTAC 58.447 37.500 9.73 0.00 0.00 1.89
1662 1864 4.959757 GTCGTATTTGCGCTGTTTATTACC 59.040 41.667 9.73 0.00 0.00 2.85
1663 1865 4.871557 TCGTATTTGCGCTGTTTATTACCT 59.128 37.500 9.73 0.00 0.00 3.08
1664 1866 5.005971 TCGTATTTGCGCTGTTTATTACCTC 59.994 40.000 9.73 0.00 0.00 3.85
1665 1867 5.006358 CGTATTTGCGCTGTTTATTACCTCT 59.994 40.000 9.73 0.00 0.00 3.69
1666 1868 4.939509 TTTGCGCTGTTTATTACCTCTC 57.060 40.909 9.73 0.00 0.00 3.20
1667 1869 3.887621 TGCGCTGTTTATTACCTCTCT 57.112 42.857 9.73 0.00 0.00 3.10
1669 1871 3.056107 TGCGCTGTTTATTACCTCTCTGT 60.056 43.478 9.73 0.00 0.00 3.41
1670 1872 3.933332 GCGCTGTTTATTACCTCTCTGTT 59.067 43.478 0.00 0.00 0.00 3.16
1671 1873 4.392138 GCGCTGTTTATTACCTCTCTGTTT 59.608 41.667 0.00 0.00 0.00 2.83
1672 1874 5.106673 GCGCTGTTTATTACCTCTCTGTTTT 60.107 40.000 0.00 0.00 0.00 2.43
1673 1875 6.534934 CGCTGTTTATTACCTCTCTGTTTTC 58.465 40.000 0.00 0.00 0.00 2.29
1674 1876 6.147164 CGCTGTTTATTACCTCTCTGTTTTCA 59.853 38.462 0.00 0.00 0.00 2.69
1675 1877 7.307751 CGCTGTTTATTACCTCTCTGTTTTCAA 60.308 37.037 0.00 0.00 0.00 2.69
1676 1878 8.349983 GCTGTTTATTACCTCTCTGTTTTCAAA 58.650 33.333 0.00 0.00 0.00 2.69
1686 1888 9.660180 ACCTCTCTGTTTTCAAATAGATAACTC 57.340 33.333 0.00 0.00 38.51 3.01
1732 4538 8.908786 ACAAAGTTGAGTCATCTATTTTGAGA 57.091 30.769 15.99 0.00 38.91 3.27
1733 4539 8.778358 ACAAAGTTGAGTCATCTATTTTGAGAC 58.222 33.333 15.99 0.00 38.91 3.36
1734 4540 7.588143 AAGTTGAGTCATCTATTTTGAGACG 57.412 36.000 4.14 0.00 34.56 4.18
1735 4541 6.102663 AGTTGAGTCATCTATTTTGAGACGG 58.897 40.000 1.70 0.00 34.56 4.79
1738 4544 5.163509 TGAGTCATCTATTTTGAGACGGAGG 60.164 44.000 0.00 0.00 34.56 4.30
1741 4608 6.039941 AGTCATCTATTTTGAGACGGAGGTAG 59.960 42.308 0.00 0.00 34.56 3.18
1767 4634 5.809051 AGGTTCGTATTTGTCGGATCTTTAC 59.191 40.000 0.00 0.00 0.00 2.01
1897 4778 8.816640 AATTAGATGTGCTTCAAACGATTTTT 57.183 26.923 0.00 0.00 0.00 1.94
1903 4784 5.461737 TGTGCTTCAAACGATTTTTCCAATC 59.538 36.000 0.00 0.00 0.00 2.67
1904 4785 5.691754 GTGCTTCAAACGATTTTTCCAATCT 59.308 36.000 0.00 0.00 0.00 2.40
1908 4789 6.633500 TCAAACGATTTTTCCAATCTCTGT 57.367 33.333 0.00 0.00 0.00 3.41
1940 4824 3.662247 ACTAGTAAGCTTGCAACGACT 57.338 42.857 17.21 9.71 0.00 4.18
2132 7743 4.097135 TGAAATGGGTTTACATGGCGTATG 59.903 41.667 0.00 1.05 42.68 2.39
2137 7748 4.134563 GGGTTTACATGGCGTATGAGAAT 58.865 43.478 8.47 0.00 39.21 2.40
2144 7755 8.669946 TTACATGGCGTATGAGAATAATTTCA 57.330 30.769 8.47 0.00 39.21 2.69
2179 7802 4.229096 AGCACGACAATTGTTTTAGCATG 58.771 39.130 13.36 0.00 0.00 4.06
2194 7817 9.691362 TGTTTTAGCATGAAAGGAAAATCTAAC 57.309 29.630 0.00 0.00 0.00 2.34
2228 10800 8.733092 TCATCCTGAGAATAAATACTCTCCAT 57.267 34.615 0.00 0.00 37.82 3.41
2253 10825 9.838339 ATCTCTTATGAGGTTACATTACAAAGG 57.162 33.333 5.84 0.00 40.58 3.11
2282 10903 3.806521 GGCATACTCATGACTCATGACAC 59.193 47.826 16.44 5.79 44.60 3.67
2293 11062 0.396435 TCATGACACGGGCTGAAACT 59.604 50.000 0.00 0.00 0.00 2.66
2365 11144 1.608590 ACAAAGCTGGTGACATTTCCG 59.391 47.619 4.72 0.00 41.51 4.30
2372 11151 3.009723 CTGGTGACATTTCCGTTATGCT 58.990 45.455 0.00 0.00 41.51 3.79
2482 11425 6.897413 AGATGGTTGTTGCCTAATTAGGAATT 59.103 34.615 31.78 8.89 46.63 2.17
2498 11441 4.590850 GGAATTTGTTCCTTGTGCTCTT 57.409 40.909 0.04 0.00 38.09 2.85
2501 11447 4.843220 ATTTGTTCCTTGTGCTCTTCAG 57.157 40.909 0.00 0.00 0.00 3.02
2540 11486 1.919918 GCATATTGCCGTTGTTTCAGC 59.080 47.619 0.00 0.00 37.42 4.26
2701 11794 8.462016 GTGCCTAACTTGAGAAATCACAATAAT 58.538 33.333 0.00 0.00 0.00 1.28
2709 11802 9.132521 CTTGAGAAATCACAATAATTGAACCAC 57.867 33.333 0.00 0.00 0.00 4.16
2803 12735 9.561270 GAATTAAGGAAAGCTAACAAGTTCATC 57.439 33.333 0.00 0.00 0.00 2.92
2861 12876 2.632028 AGCATGGCATTTTGTGGTACAA 59.368 40.909 0.00 0.00 44.16 2.41
2926 12941 2.673368 GGGAACTCATAAGCAACACTCG 59.327 50.000 0.00 0.00 0.00 4.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 3.151022 GTCGGCTAGCTGCTCCCT 61.151 66.667 19.27 0.00 42.39 4.20
2 3 3.438017 CTGTCGGCTAGCTGCTCCC 62.438 68.421 19.27 7.34 42.39 4.30
4 5 1.226831 GACTGTCGGCTAGCTGCTC 60.227 63.158 19.27 14.02 42.39 4.26
5 6 2.888863 GACTGTCGGCTAGCTGCT 59.111 61.111 19.27 7.57 42.39 4.24
6 7 2.580867 CGACTGTCGGCTAGCTGC 60.581 66.667 21.78 14.00 36.00 5.25
7 8 1.226435 GTCGACTGTCGGCTAGCTG 60.226 63.158 25.85 17.99 41.94 4.24
8 9 3.188965 GTCGACTGTCGGCTAGCT 58.811 61.111 25.85 0.00 41.94 3.32
13 14 1.429463 AATTTCAGTCGACTGTCGGC 58.571 50.000 37.21 25.81 46.20 5.54
14 15 3.057019 TCAAATTTCAGTCGACTGTCGG 58.943 45.455 37.21 23.54 44.12 4.79
15 16 4.708868 TTCAAATTTCAGTCGACTGTCG 57.291 40.909 37.21 23.33 44.12 4.35
16 17 6.414987 CCTTTTTCAAATTTCAGTCGACTGTC 59.585 38.462 37.21 3.89 44.12 3.51
17 18 6.127730 ACCTTTTTCAAATTTCAGTCGACTGT 60.128 34.615 37.21 21.15 44.12 3.55
18 19 6.265577 ACCTTTTTCAAATTTCAGTCGACTG 58.734 36.000 34.76 34.76 45.08 3.51
19 20 6.094881 TGACCTTTTTCAAATTTCAGTCGACT 59.905 34.615 13.58 13.58 0.00 4.18
20 21 6.262601 TGACCTTTTTCAAATTTCAGTCGAC 58.737 36.000 7.70 7.70 0.00 4.20
21 22 6.094881 ACTGACCTTTTTCAAATTTCAGTCGA 59.905 34.615 0.00 0.00 38.20 4.20
22 23 6.265577 ACTGACCTTTTTCAAATTTCAGTCG 58.734 36.000 0.00 0.00 38.20 4.18
23 24 7.685532 GACTGACCTTTTTCAAATTTCAGTC 57.314 36.000 16.75 16.75 46.58 3.51
24 25 7.169158 TGACTGACCTTTTTCAAATTTCAGT 57.831 32.000 10.49 10.49 43.72 3.41
25 26 8.652810 ATTGACTGACCTTTTTCAAATTTCAG 57.347 30.769 0.00 0.00 36.02 3.02
26 27 9.447157 AAATTGACTGACCTTTTTCAAATTTCA 57.553 25.926 0.00 0.00 31.96 2.69
29 30 8.892723 GGAAAATTGACTGACCTTTTTCAAATT 58.107 29.630 8.24 0.00 37.79 1.82
30 31 8.267183 AGGAAAATTGACTGACCTTTTTCAAAT 58.733 29.630 8.24 0.00 37.79 2.32
31 32 7.619965 AGGAAAATTGACTGACCTTTTTCAAA 58.380 30.769 8.24 0.00 37.79 2.69
32 33 7.181569 AGGAAAATTGACTGACCTTTTTCAA 57.818 32.000 8.24 0.00 37.79 2.69
33 34 6.790232 AGGAAAATTGACTGACCTTTTTCA 57.210 33.333 8.24 0.00 37.79 2.69
34 35 7.436376 CAGAAGGAAAATTGACTGACCTTTTTC 59.564 37.037 0.00 0.00 37.77 2.29
35 36 7.093333 ACAGAAGGAAAATTGACTGACCTTTTT 60.093 33.333 0.00 0.00 37.77 1.94
36 37 6.381133 ACAGAAGGAAAATTGACTGACCTTTT 59.619 34.615 0.00 0.00 37.77 2.27
37 38 5.893824 ACAGAAGGAAAATTGACTGACCTTT 59.106 36.000 0.00 0.00 37.77 3.11
38 39 5.449553 ACAGAAGGAAAATTGACTGACCTT 58.550 37.500 0.00 0.00 39.89 3.50
39 40 5.053978 ACAGAAGGAAAATTGACTGACCT 57.946 39.130 0.00 0.00 0.00 3.85
40 41 5.066593 AGACAGAAGGAAAATTGACTGACC 58.933 41.667 0.00 0.00 0.00 4.02
41 42 5.760253 TGAGACAGAAGGAAAATTGACTGAC 59.240 40.000 0.00 0.00 0.00 3.51
42 43 5.928976 TGAGACAGAAGGAAAATTGACTGA 58.071 37.500 0.00 0.00 0.00 3.41
43 44 6.261826 AGTTGAGACAGAAGGAAAATTGACTG 59.738 38.462 0.00 0.00 0.00 3.51
44 45 6.261826 CAGTTGAGACAGAAGGAAAATTGACT 59.738 38.462 0.00 0.00 0.00 3.41
45 46 6.038714 ACAGTTGAGACAGAAGGAAAATTGAC 59.961 38.462 0.00 0.00 0.00 3.18
46 47 6.122277 ACAGTTGAGACAGAAGGAAAATTGA 58.878 36.000 0.00 0.00 0.00 2.57
47 48 6.382869 ACAGTTGAGACAGAAGGAAAATTG 57.617 37.500 0.00 0.00 0.00 2.32
48 49 7.122650 TCAAACAGTTGAGACAGAAGGAAAATT 59.877 33.333 0.00 0.00 38.88 1.82
49 50 6.603201 TCAAACAGTTGAGACAGAAGGAAAAT 59.397 34.615 0.00 0.00 38.88 1.82
50 51 5.943416 TCAAACAGTTGAGACAGAAGGAAAA 59.057 36.000 0.00 0.00 38.88 2.29
51 52 5.496556 TCAAACAGTTGAGACAGAAGGAAA 58.503 37.500 0.00 0.00 38.88 3.13
52 53 5.097742 TCAAACAGTTGAGACAGAAGGAA 57.902 39.130 0.00 0.00 38.88 3.36
53 54 4.753516 TCAAACAGTTGAGACAGAAGGA 57.246 40.909 0.00 0.00 38.88 3.36
54 55 5.059161 TGATCAAACAGTTGAGACAGAAGG 58.941 41.667 0.00 0.00 46.75 3.46
55 56 6.481313 TCTTGATCAAACAGTTGAGACAGAAG 59.519 38.462 9.88 0.00 46.75 2.85
56 57 6.348498 TCTTGATCAAACAGTTGAGACAGAA 58.652 36.000 9.88 0.00 46.75 3.02
57 58 5.917462 TCTTGATCAAACAGTTGAGACAGA 58.083 37.500 9.88 0.00 46.75 3.41
58 59 6.128336 GGATCTTGATCAAACAGTTGAGACAG 60.128 42.308 9.88 0.00 46.75 3.51
59 60 5.702670 GGATCTTGATCAAACAGTTGAGACA 59.297 40.000 9.88 0.00 46.75 3.41
60 61 5.702670 TGGATCTTGATCAAACAGTTGAGAC 59.297 40.000 9.88 0.81 46.75 3.36
61 62 5.868454 TGGATCTTGATCAAACAGTTGAGA 58.132 37.500 9.88 0.62 46.75 3.27
62 63 6.016860 TGTTGGATCTTGATCAAACAGTTGAG 60.017 38.462 22.60 0.00 46.75 3.02
64 65 6.075762 TGTTGGATCTTGATCAAACAGTTG 57.924 37.500 22.60 0.00 39.01 3.16
68 69 4.452114 CGTCTGTTGGATCTTGATCAAACA 59.548 41.667 24.00 24.00 40.95 2.83
69 70 4.452455 ACGTCTGTTGGATCTTGATCAAAC 59.548 41.667 18.92 18.92 35.54 2.93
70 71 4.641396 ACGTCTGTTGGATCTTGATCAAA 58.359 39.130 9.88 4.83 0.00 2.69
71 72 4.245660 GACGTCTGTTGGATCTTGATCAA 58.754 43.478 8.70 8.12 0.00 2.57
72 73 3.673323 CGACGTCTGTTGGATCTTGATCA 60.673 47.826 14.70 0.00 0.00 2.92
73 74 2.854777 CGACGTCTGTTGGATCTTGATC 59.145 50.000 14.70 2.21 0.00 2.92
74 75 2.231478 ACGACGTCTGTTGGATCTTGAT 59.769 45.455 14.70 0.00 33.43 2.57
75 76 1.611977 ACGACGTCTGTTGGATCTTGA 59.388 47.619 14.70 0.00 33.43 3.02
76 77 2.065993 ACGACGTCTGTTGGATCTTG 57.934 50.000 14.70 0.00 33.43 3.02
77 78 2.673833 GAACGACGTCTGTTGGATCTT 58.326 47.619 23.62 4.92 33.43 2.40
78 79 1.401148 CGAACGACGTCTGTTGGATCT 60.401 52.381 23.62 5.50 37.22 2.75
79 80 0.982673 CGAACGACGTCTGTTGGATC 59.017 55.000 23.62 12.53 37.22 3.36
80 81 3.102515 CGAACGACGTCTGTTGGAT 57.897 52.632 23.62 6.40 37.22 3.41
81 82 4.620437 CGAACGACGTCTGTTGGA 57.380 55.556 23.62 0.00 37.22 3.53
89 90 5.769025 CAAGAAGTTGAAGACGAACGACGT 61.769 45.833 11.34 11.34 46.64 4.34
90 91 3.360765 CAAGAAGTTGAAGACGAACGACG 60.361 47.826 0.14 0.00 41.08 5.12
91 92 3.601812 GCAAGAAGTTGAAGACGAACGAC 60.602 47.826 0.14 0.00 35.46 4.34
92 93 2.538449 GCAAGAAGTTGAAGACGAACGA 59.462 45.455 0.14 0.00 35.46 3.85
93 94 2.348591 GGCAAGAAGTTGAAGACGAACG 60.349 50.000 0.00 0.00 35.46 3.95
94 95 2.872858 AGGCAAGAAGTTGAAGACGAAC 59.127 45.455 0.00 0.00 35.46 3.95
95 96 3.194005 AGGCAAGAAGTTGAAGACGAA 57.806 42.857 0.00 0.00 35.46 3.85
96 97 2.910688 AGGCAAGAAGTTGAAGACGA 57.089 45.000 0.00 0.00 35.46 4.20
97 98 3.971032 AAAGGCAAGAAGTTGAAGACG 57.029 42.857 0.00 0.00 35.46 4.18
98 99 5.506686 AGAAAAGGCAAGAAGTTGAAGAC 57.493 39.130 0.00 0.00 35.46 3.01
99 100 5.067805 GGAAGAAAAGGCAAGAAGTTGAAGA 59.932 40.000 0.00 0.00 35.46 2.87
100 101 5.068329 AGGAAGAAAAGGCAAGAAGTTGAAG 59.932 40.000 0.00 0.00 35.46 3.02
101 102 4.956075 AGGAAGAAAAGGCAAGAAGTTGAA 59.044 37.500 0.00 0.00 35.46 2.69
102 103 4.536765 AGGAAGAAAAGGCAAGAAGTTGA 58.463 39.130 0.00 0.00 35.46 3.18
103 104 4.582240 AGAGGAAGAAAAGGCAAGAAGTTG 59.418 41.667 0.00 0.00 36.67 3.16
104 105 4.797743 AGAGGAAGAAAAGGCAAGAAGTT 58.202 39.130 0.00 0.00 0.00 2.66
105 106 4.393834 GAGAGGAAGAAAAGGCAAGAAGT 58.606 43.478 0.00 0.00 0.00 3.01
106 107 3.434984 CGAGAGGAAGAAAAGGCAAGAAG 59.565 47.826 0.00 0.00 0.00 2.85
107 108 3.181454 ACGAGAGGAAGAAAAGGCAAGAA 60.181 43.478 0.00 0.00 0.00 2.52
108 109 2.368875 ACGAGAGGAAGAAAAGGCAAGA 59.631 45.455 0.00 0.00 0.00 3.02
109 110 2.481952 CACGAGAGGAAGAAAAGGCAAG 59.518 50.000 0.00 0.00 0.00 4.01
110 111 2.494059 CACGAGAGGAAGAAAAGGCAA 58.506 47.619 0.00 0.00 0.00 4.52
111 112 1.878102 GCACGAGAGGAAGAAAAGGCA 60.878 52.381 0.00 0.00 0.00 4.75
112 113 0.799393 GCACGAGAGGAAGAAAAGGC 59.201 55.000 0.00 0.00 0.00 4.35
113 114 1.801178 GTGCACGAGAGGAAGAAAAGG 59.199 52.381 0.00 0.00 0.00 3.11
114 115 1.457303 CGTGCACGAGAGGAAGAAAAG 59.543 52.381 34.93 0.00 43.02 2.27
115 116 1.497991 CGTGCACGAGAGGAAGAAAA 58.502 50.000 34.93 0.00 43.02 2.29
116 117 0.944311 GCGTGCACGAGAGGAAGAAA 60.944 55.000 41.19 0.00 43.02 2.52
117 118 1.372997 GCGTGCACGAGAGGAAGAA 60.373 57.895 41.19 0.00 43.02 2.52
118 119 2.258591 GCGTGCACGAGAGGAAGA 59.741 61.111 41.19 0.00 43.02 2.87
119 120 3.175240 CGCGTGCACGAGAGGAAG 61.175 66.667 41.19 18.02 41.67 3.46
128 129 3.323136 CTAGATCGGCGCGTGCAC 61.323 66.667 24.18 6.82 45.35 4.57
131 132 2.788172 CTAGGCTAGATCGGCGCGTG 62.788 65.000 16.70 0.00 34.19 5.34
132 133 2.593725 TAGGCTAGATCGGCGCGT 60.594 61.111 8.43 0.00 34.19 6.01
133 134 2.177038 CTAGGCTAGATCGGCGCG 59.823 66.667 16.70 0.00 34.19 6.86
134 135 2.126267 GCTAGGCTAGATCGGCGC 60.126 66.667 25.37 0.00 34.19 6.53
135 136 1.528292 AAGGCTAGGCTAGATCGGCG 61.528 60.000 25.37 0.00 34.19 6.46
136 137 1.546961 TAAGGCTAGGCTAGATCGGC 58.453 55.000 25.37 11.12 0.00 5.54
137 138 2.231721 GGTTAAGGCTAGGCTAGATCGG 59.768 54.545 25.37 0.00 0.00 4.18
138 139 2.095161 CGGTTAAGGCTAGGCTAGATCG 60.095 54.545 25.37 18.06 0.00 3.69
139 140 2.352912 GCGGTTAAGGCTAGGCTAGATC 60.353 54.545 25.37 15.18 0.00 2.75
140 141 1.619332 GCGGTTAAGGCTAGGCTAGAT 59.381 52.381 25.37 12.17 0.00 1.98
141 142 1.038280 GCGGTTAAGGCTAGGCTAGA 58.962 55.000 25.37 8.02 0.00 2.43
142 143 0.033642 GGCGGTTAAGGCTAGGCTAG 59.966 60.000 20.55 17.33 0.00 3.42
143 144 1.741327 CGGCGGTTAAGGCTAGGCTA 61.741 60.000 20.55 1.22 34.19 3.93
144 145 2.908796 GGCGGTTAAGGCTAGGCT 59.091 61.111 14.10 14.10 0.00 4.58
145 146 2.588034 CGGCGGTTAAGGCTAGGC 60.588 66.667 8.55 8.55 34.19 3.93
146 147 2.108362 CCGGCGGTTAAGGCTAGG 59.892 66.667 19.97 0.00 34.19 3.02
147 148 2.588034 GCCGGCGGTTAAGGCTAG 60.588 66.667 28.82 0.00 46.83 3.42
151 152 4.851179 GAGGGCCGGCGGTTAAGG 62.851 72.222 28.82 0.11 0.00 2.69
189 190 1.933307 ATTTAGGGAAGGGTGGGGCG 61.933 60.000 0.00 0.00 0.00 6.13
190 191 0.338467 AATTTAGGGAAGGGTGGGGC 59.662 55.000 0.00 0.00 0.00 5.80
191 192 2.091499 GGTAATTTAGGGAAGGGTGGGG 60.091 54.545 0.00 0.00 0.00 4.96
192 193 2.091499 GGGTAATTTAGGGAAGGGTGGG 60.091 54.545 0.00 0.00 0.00 4.61
193 194 2.091499 GGGGTAATTTAGGGAAGGGTGG 60.091 54.545 0.00 0.00 0.00 4.61
194 195 2.091499 GGGGGTAATTTAGGGAAGGGTG 60.091 54.545 0.00 0.00 0.00 4.61
195 196 2.220470 GGGGGTAATTTAGGGAAGGGT 58.780 52.381 0.00 0.00 0.00 4.34
234 235 2.448542 TAGAGGGATGGCCAGGGC 60.449 66.667 13.05 5.91 41.06 5.19
235 236 1.845205 CCTAGAGGGATGGCCAGGG 60.845 68.421 13.05 0.00 37.23 4.45
236 237 3.897856 CCTAGAGGGATGGCCAGG 58.102 66.667 13.05 0.00 37.23 4.45
256 257 4.452733 GAAGCTCGGTGTCGGGGG 62.453 72.222 0.00 0.00 37.35 5.40
257 258 2.837371 GAAGAAGCTCGGTGTCGGGG 62.837 65.000 0.00 0.00 37.35 5.73
258 259 1.446272 GAAGAAGCTCGGTGTCGGG 60.446 63.158 0.00 0.00 40.45 5.14
259 260 0.456995 GAGAAGAAGCTCGGTGTCGG 60.457 60.000 0.00 0.00 36.95 4.79
260 261 3.022981 GAGAAGAAGCTCGGTGTCG 57.977 57.895 0.00 0.00 37.82 4.35
267 268 1.448717 GTGGCCCGAGAAGAAGCTC 60.449 63.158 0.00 0.00 0.00 4.09
268 269 1.915769 AGTGGCCCGAGAAGAAGCT 60.916 57.895 0.00 0.00 0.00 3.74
269 270 1.743252 CAGTGGCCCGAGAAGAAGC 60.743 63.158 0.00 0.00 0.00 3.86
270 271 1.743252 GCAGTGGCCCGAGAAGAAG 60.743 63.158 0.00 0.00 0.00 2.85
271 272 2.347490 GCAGTGGCCCGAGAAGAA 59.653 61.111 0.00 0.00 0.00 2.52
312 313 1.143970 TTTAGGGTTCAGGGTGGGGG 61.144 60.000 0.00 0.00 0.00 5.40
313 314 0.781278 TTTTAGGGTTCAGGGTGGGG 59.219 55.000 0.00 0.00 0.00 4.96
314 315 2.919772 ATTTTAGGGTTCAGGGTGGG 57.080 50.000 0.00 0.00 0.00 4.61
315 316 4.855298 TCTATTTTAGGGTTCAGGGTGG 57.145 45.455 0.00 0.00 0.00 4.61
316 317 6.001449 TCATCTATTTTAGGGTTCAGGGTG 57.999 41.667 0.00 0.00 0.00 4.61
317 318 6.410853 CCATCATCTATTTTAGGGTTCAGGGT 60.411 42.308 0.00 0.00 0.00 4.34
318 319 6.006449 CCATCATCTATTTTAGGGTTCAGGG 58.994 44.000 0.00 0.00 0.00 4.45
319 320 6.006449 CCCATCATCTATTTTAGGGTTCAGG 58.994 44.000 0.00 0.00 0.00 3.86
320 321 6.006449 CCCCATCATCTATTTTAGGGTTCAG 58.994 44.000 0.00 0.00 32.90 3.02
321 322 5.435041 ACCCCATCATCTATTTTAGGGTTCA 59.565 40.000 0.00 0.00 44.14 3.18
322 323 5.770162 CACCCCATCATCTATTTTAGGGTTC 59.230 44.000 0.00 0.00 44.14 3.62
323 324 5.435041 TCACCCCATCATCTATTTTAGGGTT 59.565 40.000 0.00 0.00 44.14 4.11
325 326 5.582950 TCACCCCATCATCTATTTTAGGG 57.417 43.478 0.00 0.00 39.33 3.53
326 327 6.656693 GTCATCACCCCATCATCTATTTTAGG 59.343 42.308 0.00 0.00 0.00 2.69
327 328 6.369890 CGTCATCACCCCATCATCTATTTTAG 59.630 42.308 0.00 0.00 0.00 1.85
328 329 6.230472 CGTCATCACCCCATCATCTATTTTA 58.770 40.000 0.00 0.00 0.00 1.52
329 330 5.065914 CGTCATCACCCCATCATCTATTTT 58.934 41.667 0.00 0.00 0.00 1.82
330 331 4.505566 CCGTCATCACCCCATCATCTATTT 60.506 45.833 0.00 0.00 0.00 1.40
331 332 3.008375 CCGTCATCACCCCATCATCTATT 59.992 47.826 0.00 0.00 0.00 1.73
332 333 2.568956 CCGTCATCACCCCATCATCTAT 59.431 50.000 0.00 0.00 0.00 1.98
333 334 1.970640 CCGTCATCACCCCATCATCTA 59.029 52.381 0.00 0.00 0.00 1.98
334 335 0.761187 CCGTCATCACCCCATCATCT 59.239 55.000 0.00 0.00 0.00 2.90
335 336 0.886490 GCCGTCATCACCCCATCATC 60.886 60.000 0.00 0.00 0.00 2.92
336 337 1.149174 GCCGTCATCACCCCATCAT 59.851 57.895 0.00 0.00 0.00 2.45
337 338 2.589540 GCCGTCATCACCCCATCA 59.410 61.111 0.00 0.00 0.00 3.07
338 339 2.588877 CGCCGTCATCACCCCATC 60.589 66.667 0.00 0.00 0.00 3.51
339 340 3.080765 TCGCCGTCATCACCCCAT 61.081 61.111 0.00 0.00 0.00 4.00
340 341 3.770040 CTCGCCGTCATCACCCCA 61.770 66.667 0.00 0.00 0.00 4.96
344 345 3.740128 ATGGGCTCGCCGTCATCAC 62.740 63.158 1.24 0.00 36.85 3.06
345 346 2.923426 GAATGGGCTCGCCGTCATCA 62.923 60.000 1.24 0.00 36.85 3.07
346 347 2.203070 AATGGGCTCGCCGTCATC 60.203 61.111 1.24 0.00 36.85 2.92
347 348 2.203070 GAATGGGCTCGCCGTCAT 60.203 61.111 1.24 0.00 36.85 3.06
348 349 4.467084 GGAATGGGCTCGCCGTCA 62.467 66.667 1.24 0.00 36.85 4.35
349 350 3.682292 AAGGAATGGGCTCGCCGTC 62.682 63.158 1.24 0.00 36.85 4.79
350 351 3.682292 GAAGGAATGGGCTCGCCGT 62.682 63.158 1.24 0.00 36.85 5.68
351 352 2.897350 GAAGGAATGGGCTCGCCG 60.897 66.667 1.24 0.00 36.85 6.46
352 353 1.524849 GAGAAGGAATGGGCTCGCC 60.525 63.158 0.00 0.00 0.00 5.54
353 354 0.531753 GAGAGAAGGAATGGGCTCGC 60.532 60.000 0.00 0.00 32.80 5.03
354 355 0.105778 GGAGAGAAGGAATGGGCTCG 59.894 60.000 0.00 0.00 32.80 5.03
355 356 1.140652 CTGGAGAGAAGGAATGGGCTC 59.859 57.143 0.00 0.00 0.00 4.70
356 357 1.211456 CTGGAGAGAAGGAATGGGCT 58.789 55.000 0.00 0.00 0.00 5.19
357 358 0.915364 ACTGGAGAGAAGGAATGGGC 59.085 55.000 0.00 0.00 0.00 5.36
358 359 2.170187 CTCACTGGAGAGAAGGAATGGG 59.830 54.545 0.00 0.00 44.26 4.00
359 360 2.170187 CCTCACTGGAGAGAAGGAATGG 59.830 54.545 0.00 0.00 44.26 3.16
360 361 2.419851 GCCTCACTGGAGAGAAGGAATG 60.420 54.545 0.00 0.00 44.26 2.67
361 362 1.836802 GCCTCACTGGAGAGAAGGAAT 59.163 52.381 0.00 0.00 44.26 3.01
362 363 1.270907 GCCTCACTGGAGAGAAGGAA 58.729 55.000 0.00 0.00 44.26 3.36
363 364 0.616111 GGCCTCACTGGAGAGAAGGA 60.616 60.000 0.00 0.00 44.26 3.36
364 365 1.621672 GGGCCTCACTGGAGAGAAGG 61.622 65.000 0.84 0.00 44.26 3.46
365 366 0.617249 AGGGCCTCACTGGAGAGAAG 60.617 60.000 0.00 0.00 44.26 2.85
366 367 0.178891 AAGGGCCTCACTGGAGAGAA 60.179 55.000 6.46 0.00 44.26 2.87
367 368 0.616111 GAAGGGCCTCACTGGAGAGA 60.616 60.000 6.46 0.00 44.26 3.10
368 369 1.621672 GGAAGGGCCTCACTGGAGAG 61.622 65.000 6.46 0.00 44.26 3.20
369 370 1.613630 GGAAGGGCCTCACTGGAGA 60.614 63.158 6.46 0.00 44.26 3.71
370 371 1.614824 AGGAAGGGCCTCACTGGAG 60.615 63.158 6.46 0.00 46.97 3.86
371 372 2.538760 AGGAAGGGCCTCACTGGA 59.461 61.111 6.46 0.00 46.97 3.86
379 380 1.208165 TGGAAGGAGAAGGAAGGGCC 61.208 60.000 0.00 0.00 0.00 5.80
380 381 0.922626 ATGGAAGGAGAAGGAAGGGC 59.077 55.000 0.00 0.00 0.00 5.19
381 382 2.200081 TCATGGAAGGAGAAGGAAGGG 58.800 52.381 0.00 0.00 0.00 3.95
382 383 4.459330 GAATCATGGAAGGAGAAGGAAGG 58.541 47.826 0.00 0.00 0.00 3.46
383 384 4.125703 CGAATCATGGAAGGAGAAGGAAG 58.874 47.826 0.00 0.00 0.00 3.46
384 385 3.774766 TCGAATCATGGAAGGAGAAGGAA 59.225 43.478 0.00 0.00 0.00 3.36
385 386 3.374764 TCGAATCATGGAAGGAGAAGGA 58.625 45.455 0.00 0.00 0.00 3.36
386 387 3.827008 TCGAATCATGGAAGGAGAAGG 57.173 47.619 0.00 0.00 0.00 3.46
387 388 6.510799 CGATTTTCGAATCATGGAAGGAGAAG 60.511 42.308 0.00 0.00 43.74 2.85
388 389 5.294306 CGATTTTCGAATCATGGAAGGAGAA 59.706 40.000 0.00 0.00 43.74 2.87
389 390 4.811024 CGATTTTCGAATCATGGAAGGAGA 59.189 41.667 0.00 0.00 43.74 3.71
390 391 4.811024 TCGATTTTCGAATCATGGAAGGAG 59.189 41.667 0.00 0.00 46.90 3.69
391 392 4.765273 TCGATTTTCGAATCATGGAAGGA 58.235 39.130 0.00 0.00 46.90 3.36
404 405 2.806244 AGTTTGGGTCAGTCGATTTTCG 59.194 45.455 0.00 0.00 42.10 3.46
405 406 3.120649 CGAGTTTGGGTCAGTCGATTTTC 60.121 47.826 0.00 0.00 32.32 2.29
406 407 2.806244 CGAGTTTGGGTCAGTCGATTTT 59.194 45.455 0.00 0.00 32.32 1.82
407 408 2.036733 TCGAGTTTGGGTCAGTCGATTT 59.963 45.455 0.00 0.00 34.86 2.17
408 409 1.616865 TCGAGTTTGGGTCAGTCGATT 59.383 47.619 0.00 0.00 34.86 3.34
409 410 1.254026 TCGAGTTTGGGTCAGTCGAT 58.746 50.000 0.00 0.00 34.86 3.59
410 411 1.034356 TTCGAGTTTGGGTCAGTCGA 58.966 50.000 0.00 0.00 37.86 4.20
411 412 1.860676 TTTCGAGTTTGGGTCAGTCG 58.139 50.000 0.00 0.00 0.00 4.18
412 413 3.203716 ACTTTTCGAGTTTGGGTCAGTC 58.796 45.455 0.00 0.00 33.92 3.51
413 414 3.203716 GACTTTTCGAGTTTGGGTCAGT 58.796 45.455 0.00 0.00 39.19 3.41
414 415 3.202906 TGACTTTTCGAGTTTGGGTCAG 58.797 45.455 0.00 0.00 39.19 3.51
415 416 3.202906 CTGACTTTTCGAGTTTGGGTCA 58.797 45.455 0.00 0.00 39.19 4.02
416 417 3.203716 ACTGACTTTTCGAGTTTGGGTC 58.796 45.455 0.00 0.00 39.19 4.46
417 418 3.203716 GACTGACTTTTCGAGTTTGGGT 58.796 45.455 0.00 0.00 39.19 4.51
418 419 2.221055 CGACTGACTTTTCGAGTTTGGG 59.779 50.000 0.00 0.00 39.19 4.12
419 420 2.221055 CCGACTGACTTTTCGAGTTTGG 59.779 50.000 0.00 0.00 39.19 3.28
420 421 2.348591 GCCGACTGACTTTTCGAGTTTG 60.349 50.000 0.00 0.00 39.19 2.93
421 422 1.865340 GCCGACTGACTTTTCGAGTTT 59.135 47.619 0.00 0.00 39.19 2.66
422 423 1.068741 AGCCGACTGACTTTTCGAGTT 59.931 47.619 0.00 0.00 39.19 3.01
423 424 0.674534 AGCCGACTGACTTTTCGAGT 59.325 50.000 0.00 0.00 42.70 4.18
424 425 3.498676 AGCCGACTGACTTTTCGAG 57.501 52.632 0.00 0.00 37.43 4.04
434 435 6.276847 AGTTTATCTAGATTTCAGCCGACTG 58.723 40.000 11.25 0.00 45.95 3.51
435 436 6.472686 AGTTTATCTAGATTTCAGCCGACT 57.527 37.500 11.25 1.70 0.00 4.18
436 437 6.363896 GCTAGTTTATCTAGATTTCAGCCGAC 59.636 42.308 11.25 0.00 46.53 4.79
437 438 6.448006 GCTAGTTTATCTAGATTTCAGCCGA 58.552 40.000 11.25 0.00 46.53 5.54
438 439 5.635700 GGCTAGTTTATCTAGATTTCAGCCG 59.364 44.000 11.25 0.00 46.53 5.52
439 440 6.525629 TGGCTAGTTTATCTAGATTTCAGCC 58.474 40.000 23.33 23.33 46.53 4.85
440 441 7.495934 TGTTGGCTAGTTTATCTAGATTTCAGC 59.504 37.037 11.25 12.05 46.53 4.26
441 442 8.948631 TGTTGGCTAGTTTATCTAGATTTCAG 57.051 34.615 11.25 3.27 46.53 3.02
455 456 8.342634 CGCAATTTAAGTATATGTTGGCTAGTT 58.657 33.333 0.00 0.00 0.00 2.24
456 457 7.497909 ACGCAATTTAAGTATATGTTGGCTAGT 59.502 33.333 0.00 0.00 0.00 2.57
457 458 7.861630 ACGCAATTTAAGTATATGTTGGCTAG 58.138 34.615 0.00 0.00 0.00 3.42
458 459 7.795482 ACGCAATTTAAGTATATGTTGGCTA 57.205 32.000 0.00 0.00 0.00 3.93
459 460 6.693315 ACGCAATTTAAGTATATGTTGGCT 57.307 33.333 0.00 0.00 0.00 4.75
460 461 7.700656 AGAAACGCAATTTAAGTATATGTTGGC 59.299 33.333 0.00 0.00 0.00 4.52
461 462 9.567848 AAGAAACGCAATTTAAGTATATGTTGG 57.432 29.630 0.00 0.00 0.00 3.77
464 465 9.567848 CCAAAGAAACGCAATTTAAGTATATGT 57.432 29.630 0.00 0.00 0.00 2.29
465 466 9.567848 ACCAAAGAAACGCAATTTAAGTATATG 57.432 29.630 0.00 0.00 0.00 1.78
466 467 9.567848 CACCAAAGAAACGCAATTTAAGTATAT 57.432 29.630 0.00 0.00 0.00 0.86
467 468 8.569641 ACACCAAAGAAACGCAATTTAAGTATA 58.430 29.630 0.00 0.00 0.00 1.47
468 469 7.430441 ACACCAAAGAAACGCAATTTAAGTAT 58.570 30.769 0.00 0.00 0.00 2.12
475 476 2.542824 CGGACACCAAAGAAACGCAATT 60.543 45.455 0.00 0.00 0.00 2.32
514 515 5.040635 ACGCAAACCTGACACAAATTTAAG 58.959 37.500 0.00 0.00 0.00 1.85
516 517 4.498345 GGACGCAAACCTGACACAAATTTA 60.498 41.667 0.00 0.00 0.00 1.40
530 531 2.654912 CGGACTCGTGGACGCAAAC 61.655 63.158 0.00 0.00 39.60 2.93
559 560 1.528309 CAAAGCACGGTCCCAAGGT 60.528 57.895 0.00 0.00 0.00 3.50
568 569 1.135315 CATTGGATGGTCAAAGCACGG 60.135 52.381 0.00 0.00 0.00 4.94
587 588 3.704800 TCAAACCCATATCCGAACACA 57.295 42.857 0.00 0.00 0.00 3.72
641 642 1.341209 CCTTTTGTCAAGCCTTCCCAC 59.659 52.381 0.00 0.00 0.00 4.61
667 668 2.852075 TGGTTCCCCGCTCCACTT 60.852 61.111 0.00 0.00 0.00 3.16
668 669 3.637273 GTGGTTCCCCGCTCCACT 61.637 66.667 6.35 0.00 45.46 4.00
670 671 4.974438 AGGTGGTTCCCCGCTCCA 62.974 66.667 0.00 0.00 41.26 3.86
707 708 7.154656 AGAAGCTATGGTTGTTTTCAAAATCC 58.845 34.615 0.00 0.00 41.76 3.01
708 709 8.593492 AAGAAGCTATGGTTGTTTTCAAAATC 57.407 30.769 0.00 0.00 41.76 2.17
766 768 1.670811 GACACGATTCCGGATGCAATT 59.329 47.619 4.15 0.00 40.78 2.32
798 800 1.023502 TTCCGGTTCCCGTCAAAAAC 58.976 50.000 0.00 0.00 46.80 2.43
804 806 2.097680 TACAATTTCCGGTTCCCGTC 57.902 50.000 0.00 0.00 46.80 4.79
805 807 2.237893 AGATACAATTTCCGGTTCCCGT 59.762 45.455 0.00 0.00 46.80 5.28
807 809 6.954487 AAATAGATACAATTTCCGGTTCCC 57.046 37.500 0.00 0.00 0.00 3.97
809 811 9.946165 CCTTAAAATAGATACAATTTCCGGTTC 57.054 33.333 0.00 0.00 0.00 3.62
1034 1226 4.985409 TGCGTGGTTGTGGATTTATTTTTC 59.015 37.500 0.00 0.00 0.00 2.29
1037 1229 4.799564 ATGCGTGGTTGTGGATTTATTT 57.200 36.364 0.00 0.00 0.00 1.40
1070 1262 0.676782 AGTTTGCTTCCCCGAATCCG 60.677 55.000 0.00 0.00 0.00 4.18
1129 1325 1.195674 GCTTTCGAGCTCGCTCTTTTT 59.804 47.619 30.97 0.00 40.69 1.94
1138 1334 0.953960 TTTTCCCCGCTTTCGAGCTC 60.954 55.000 2.73 2.73 38.10 4.09
1184 1380 0.798776 CGCCGCTCTTTTCTGTCATT 59.201 50.000 0.00 0.00 0.00 2.57
1187 1383 2.476499 GCGCCGCTCTTTTCTGTC 59.524 61.111 0.00 0.00 0.00 3.51
1213 1409 1.671901 GCTCTACCTTCTGCGCCTCT 61.672 60.000 4.18 0.00 0.00 3.69
1338 1540 2.227089 CTGGTCGTAGGTGTGGAGCC 62.227 65.000 0.00 0.00 0.00 4.70
1348 1550 2.417379 CCACTCATTGTCCTGGTCGTAG 60.417 54.545 0.00 0.00 0.00 3.51
1355 1557 2.746362 GCTTCTTCCACTCATTGTCCTG 59.254 50.000 0.00 0.00 0.00 3.86
1359 1561 2.550830 ACGCTTCTTCCACTCATTGT 57.449 45.000 0.00 0.00 0.00 2.71
1363 1565 1.593196 CCAAACGCTTCTTCCACTCA 58.407 50.000 0.00 0.00 0.00 3.41
1427 1629 8.184304 AGGTACTTGGTATATTCACTGATCTC 57.816 38.462 0.00 0.00 27.25 2.75
1516 1718 6.563381 GCGTCGTTCACTAAAAAGATTTCTCA 60.563 38.462 0.00 0.00 0.00 3.27
1548 1750 1.147600 AAGGACGAACACCACACCC 59.852 57.895 0.00 0.00 0.00 4.61
1567 1769 0.949105 ACGAACCACGATGCCAGAAC 60.949 55.000 0.00 0.00 45.77 3.01
1570 1772 1.651987 AATACGAACCACGATGCCAG 58.348 50.000 0.00 0.00 45.77 4.85
1610 1812 1.066716 ACCATACATACAACCACGCGT 60.067 47.619 5.58 5.58 0.00 6.01
1611 1813 1.647346 ACCATACATACAACCACGCG 58.353 50.000 3.53 3.53 0.00 6.01
1612 1814 3.307782 GTGTACCATACATACAACCACGC 59.692 47.826 0.00 0.00 41.34 5.34
1613 1815 4.751060 AGTGTACCATACATACAACCACG 58.249 43.478 0.00 0.00 41.34 4.94
1614 1816 5.105064 AGGAGTGTACCATACATACAACCAC 60.105 44.000 10.25 0.00 41.34 4.16
1615 1817 5.027460 AGGAGTGTACCATACATACAACCA 58.973 41.667 10.25 0.00 41.34 3.67
1616 1818 5.105064 ACAGGAGTGTACCATACATACAACC 60.105 44.000 0.00 0.00 41.34 3.77
1617 1819 5.974108 ACAGGAGTGTACCATACATACAAC 58.026 41.667 0.00 0.00 41.34 3.32
1660 1862 9.660180 GAGTTATCTATTTGAAAACAGAGAGGT 57.340 33.333 0.31 0.00 0.00 3.85
1661 1863 9.658799 TGAGTTATCTATTTGAAAACAGAGAGG 57.341 33.333 0.31 0.00 0.00 3.69
1706 1908 9.996554 TCTCAAAATAGATGACTCAACTTTGTA 57.003 29.630 0.00 0.00 0.00 2.41
1707 1909 8.778358 GTCTCAAAATAGATGACTCAACTTTGT 58.222 33.333 0.00 0.00 0.00 2.83
1714 4520 5.163509 CCTCCGTCTCAAAATAGATGACTCA 60.164 44.000 0.00 0.00 34.94 3.41
1715 4521 5.163499 ACCTCCGTCTCAAAATAGATGACTC 60.163 44.000 0.00 0.00 34.94 3.36
1717 4523 5.012328 ACCTCCGTCTCAAAATAGATGAC 57.988 43.478 0.00 0.00 34.94 3.06
1719 4525 6.150396 ACTACCTCCGTCTCAAAATAGATG 57.850 41.667 0.00 0.00 33.12 2.90
1725 4531 3.771216 ACCTACTACCTCCGTCTCAAAA 58.229 45.455 0.00 0.00 0.00 2.44
1728 4534 2.679059 CGAACCTACTACCTCCGTCTCA 60.679 54.545 0.00 0.00 0.00 3.27
1732 4538 3.567478 ATACGAACCTACTACCTCCGT 57.433 47.619 0.00 0.00 0.00 4.69
1733 4539 4.096984 ACAAATACGAACCTACTACCTCCG 59.903 45.833 0.00 0.00 0.00 4.63
1734 4540 5.586339 GACAAATACGAACCTACTACCTCC 58.414 45.833 0.00 0.00 0.00 4.30
1735 4541 5.269313 CGACAAATACGAACCTACTACCTC 58.731 45.833 0.00 0.00 0.00 3.85
1738 4544 5.235305 TCCGACAAATACGAACCTACTAC 57.765 43.478 0.00 0.00 0.00 2.73
1741 4608 4.929781 AGATCCGACAAATACGAACCTAC 58.070 43.478 0.00 0.00 0.00 3.18
1767 4634 1.589803 AAAGAGGAAACCAACCGACG 58.410 50.000 0.00 0.00 0.00 5.12
1875 4756 6.016693 TGGAAAAATCGTTTGAAGCACATCTA 60.017 34.615 0.00 0.00 0.00 1.98
1887 4768 8.630037 AGTAAACAGAGATTGGAAAAATCGTTT 58.370 29.630 0.00 0.00 32.31 3.60
1908 4789 9.932207 TGCAAGCTTACTAGTAAACATAGTAAA 57.068 29.630 15.95 0.00 42.31 2.01
1940 4824 8.887036 ATATATTTGCATTAAGTGAGACGTGA 57.113 30.769 0.00 0.00 0.00 4.35
1971 4855 9.424319 TCAGAATATAGAACGAATGGCTTATTC 57.576 33.333 0.00 4.73 41.46 1.75
2137 7748 6.640499 CGTGCTTCTGGTTCAATTTGAAATTA 59.360 34.615 13.21 2.93 38.22 1.40
2144 7755 2.948979 TGTCGTGCTTCTGGTTCAATTT 59.051 40.909 0.00 0.00 0.00 1.82
2179 7802 9.167311 TGAGAGCAATAGTTAGATTTTCCTTTC 57.833 33.333 0.00 0.00 0.00 2.62
2228 10800 8.265055 CCCTTTGTAATGTAACCTCATAAGAGA 58.735 37.037 0.00 0.00 44.98 3.10
2253 10825 2.111878 ATGAGTATGCCGCTGCCC 59.888 61.111 0.00 0.00 36.33 5.36
2282 10903 5.588648 TGGATTATTAGAAAGTTTCAGCCCG 59.411 40.000 17.65 0.00 0.00 6.13
2349 11118 2.851263 TAACGGAAATGTCACCAGCT 57.149 45.000 0.00 0.00 0.00 4.24
2365 11144 3.809832 AGATACATGTTGCCGAGCATAAC 59.190 43.478 2.30 0.00 38.76 1.89
2372 11151 2.481969 GCAGAGAGATACATGTTGCCGA 60.482 50.000 2.30 0.00 0.00 5.54
2482 11425 3.281727 ACTGAAGAGCACAAGGAACAA 57.718 42.857 0.00 0.00 0.00 2.83
2498 11441 4.389374 CCAAGAAGGCTAAGAACAACTGA 58.611 43.478 0.00 0.00 0.00 3.41
2540 11486 6.406400 CCTTGTAGAAGATGGTTCTAGGTCTG 60.406 46.154 0.19 0.00 32.25 3.51
2675 11768 5.689383 TTGTGATTTCTCAAGTTAGGCAC 57.311 39.130 0.00 0.00 31.85 5.01
2838 12853 3.192422 TGTACCACAAAATGCCATGCTAC 59.808 43.478 0.00 0.00 0.00 3.58
2861 12876 7.897864 ACAACTCTGCTCTATACTGTTACTTT 58.102 34.615 0.00 0.00 0.00 2.66
2926 12941 3.058016 TGCAACAGCTCAAGCACTATTTC 60.058 43.478 4.59 0.00 45.16 2.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.