Multiple sequence alignment - TraesCS3B01G167200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G167200 chr3B 100.000 3286 0 0 1 3286 167456069 167459354 0.000000e+00 6069
1 TraesCS3B01G167200 chr3D 92.939 1388 61 12 233 1617 113579703 113578350 0.000000e+00 1986
2 TraesCS3B01G167200 chr3D 96.372 634 18 2 1618 2250 113578304 113577675 0.000000e+00 1038
3 TraesCS3B01G167200 chr3D 92.760 221 16 0 1 221 477964693 477964913 1.470000e-83 320
4 TraesCS3B01G167200 chr3D 91.346 104 8 1 2245 2348 113572387 113572285 1.230000e-29 141
5 TraesCS3B01G167200 chr5B 96.148 623 23 1 2663 3284 652929001 652929623 0.000000e+00 1016
6 TraesCS3B01G167200 chr5B 89.091 220 23 1 1 220 499311296 499311514 4.180000e-69 272
7 TraesCS3B01G167200 chr3A 90.435 690 58 5 1669 2351 108952881 108952193 0.000000e+00 902
8 TraesCS3B01G167200 chr3A 88.209 670 31 15 757 1416 108953888 108953257 0.000000e+00 756
9 TraesCS3B01G167200 chr3A 85.714 644 79 9 2644 3283 13790445 13789811 0.000000e+00 667
10 TraesCS3B01G167200 chr3A 82.669 652 88 15 2648 3283 729421001 729420359 3.700000e-154 555
11 TraesCS3B01G167200 chr3A 83.960 505 44 15 243 732 108954437 108953955 1.800000e-122 449
12 TraesCS3B01G167200 chr7A 86.957 644 71 7 2645 3283 641144825 641145460 0.000000e+00 712
13 TraesCS3B01G167200 chr7A 85.649 655 84 6 2632 3283 192658529 192657882 0.000000e+00 680
14 TraesCS3B01G167200 chr7A 85.626 647 82 5 2642 3283 196670759 196671399 0.000000e+00 669
15 TraesCS3B01G167200 chr7A 90.865 208 13 4 2369 2574 214385540 214385337 1.160000e-69 274
16 TraesCS3B01G167200 chr1D 86.595 649 70 12 2644 3283 401792323 401791683 0.000000e+00 701
17 TraesCS3B01G167200 chr1D 79.908 652 111 14 2646 3284 111052878 111052234 8.310000e-126 460
18 TraesCS3B01G167200 chr1A 86.449 642 78 6 2644 3283 511240584 511239950 0.000000e+00 695
19 TraesCS3B01G167200 chr1A 91.429 210 11 3 2368 2574 193704744 193704539 6.940000e-72 281
20 TraesCS3B01G167200 chr6A 86.137 642 78 7 2644 3283 596317382 596318014 0.000000e+00 682
21 TraesCS3B01G167200 chr6A 87.137 241 27 3 2402 2642 1028700 1028464 1.500000e-68 270
22 TraesCS3B01G167200 chr2A 93.720 207 11 1 2368 2574 349924879 349925083 3.180000e-80 309
23 TraesCS3B01G167200 chr2A 90.547 201 14 3 2379 2574 493563703 493563903 9.040000e-66 261
24 TraesCS3B01G167200 chr5D 91.403 221 19 0 1 221 533577815 533577595 1.480000e-78 303
25 TraesCS3B01G167200 chr5D 89.593 221 23 0 1 221 75994826 75994606 6.940000e-72 281
26 TraesCS3B01G167200 chr6D 91.071 224 18 1 1 224 3219146 3218925 5.330000e-78 302
27 TraesCS3B01G167200 chr6D 89.952 209 13 5 2368 2574 220803509 220803307 2.510000e-66 263
28 TraesCS3B01G167200 chr2D 90.909 220 19 1 1 220 68934608 68934826 8.920000e-76 294
29 TraesCS3B01G167200 chr2D 91.960 199 11 3 2379 2574 203990139 203989943 1.160000e-69 274
30 TraesCS3B01G167200 chr7D 92.344 209 10 3 2368 2574 375917310 375917106 3.210000e-75 292
31 TraesCS3B01G167200 chr4D 90.338 207 18 1 2368 2574 237728683 237728479 1.500000e-68 270


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G167200 chr3B 167456069 167459354 3285 False 6069.000000 6069 100.000000 1 3286 1 chr3B.!!$F1 3285
1 TraesCS3B01G167200 chr3D 113577675 113579703 2028 True 1512.000000 1986 94.655500 233 2250 2 chr3D.!!$R2 2017
2 TraesCS3B01G167200 chr5B 652929001 652929623 622 False 1016.000000 1016 96.148000 2663 3284 1 chr5B.!!$F2 621
3 TraesCS3B01G167200 chr3A 108952193 108954437 2244 True 702.333333 902 87.534667 243 2351 3 chr3A.!!$R3 2108
4 TraesCS3B01G167200 chr3A 13789811 13790445 634 True 667.000000 667 85.714000 2644 3283 1 chr3A.!!$R1 639
5 TraesCS3B01G167200 chr3A 729420359 729421001 642 True 555.000000 555 82.669000 2648 3283 1 chr3A.!!$R2 635
6 TraesCS3B01G167200 chr7A 641144825 641145460 635 False 712.000000 712 86.957000 2645 3283 1 chr7A.!!$F2 638
7 TraesCS3B01G167200 chr7A 192657882 192658529 647 True 680.000000 680 85.649000 2632 3283 1 chr7A.!!$R1 651
8 TraesCS3B01G167200 chr7A 196670759 196671399 640 False 669.000000 669 85.626000 2642 3283 1 chr7A.!!$F1 641
9 TraesCS3B01G167200 chr1D 401791683 401792323 640 True 701.000000 701 86.595000 2644 3283 1 chr1D.!!$R2 639
10 TraesCS3B01G167200 chr1D 111052234 111052878 644 True 460.000000 460 79.908000 2646 3284 1 chr1D.!!$R1 638
11 TraesCS3B01G167200 chr1A 511239950 511240584 634 True 695.000000 695 86.449000 2644 3283 1 chr1A.!!$R2 639
12 TraesCS3B01G167200 chr6A 596317382 596318014 632 False 682.000000 682 86.137000 2644 3283 1 chr6A.!!$F1 639

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
19 20 0.033894 GAGGAGACGAAGAGGGTCCT 60.034 60.0 0.00 0.00 38.46 3.85 F
122 123 0.035439 CCACCCAGCTTACGATGGTT 60.035 55.0 2.55 0.00 45.24 3.67 F
1138 1208 0.099082 CTCTTACGGCCACTCGAGTC 59.901 60.0 16.96 5.28 0.00 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1419 1489 0.034059 AGCTGACTGAACTTGGACGG 59.966 55.0 0.0 0.0 0.00 4.79 R
1572 1696 0.165944 GGTGATTGACAAAGCGACCG 59.834 55.0 0.0 0.0 0.00 4.79 R
2295 2495 0.107703 CGACAGGTATGTGCCCATGT 60.108 55.0 0.0 0.0 40.68 3.21 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.495809 GAGGAGACGAAGAGGGTCC 58.504 63.158 0.00 0.00 34.97 4.46
19 20 0.033894 GAGGAGACGAAGAGGGTCCT 60.034 60.000 0.00 0.00 38.46 3.85
20 21 0.323908 AGGAGACGAAGAGGGTCCTG 60.324 60.000 0.00 0.00 35.55 3.86
21 22 1.513622 GAGACGAAGAGGGTCCTGC 59.486 63.158 0.00 0.00 34.97 4.85
22 23 1.228894 AGACGAAGAGGGTCCTGCA 60.229 57.895 0.00 0.00 34.97 4.41
23 24 0.616111 AGACGAAGAGGGTCCTGCAT 60.616 55.000 0.00 0.00 34.97 3.96
24 25 0.460987 GACGAAGAGGGTCCTGCATG 60.461 60.000 0.00 0.00 0.00 4.06
25 26 1.153289 CGAAGAGGGTCCTGCATGG 60.153 63.158 0.00 0.00 37.10 3.66
26 27 1.225704 GAAGAGGGTCCTGCATGGG 59.774 63.158 0.00 0.00 36.20 4.00
27 28 1.229951 AAGAGGGTCCTGCATGGGA 60.230 57.895 0.00 0.00 36.20 4.37
28 29 0.625683 AAGAGGGTCCTGCATGGGAT 60.626 55.000 0.00 0.00 37.73 3.85
29 30 1.059006 AGAGGGTCCTGCATGGGATC 61.059 60.000 0.00 0.00 37.73 3.36
31 32 2.111878 GGTCCTGCATGGGATCCG 59.888 66.667 5.45 0.00 37.73 4.18
32 33 2.111878 GTCCTGCATGGGATCCGG 59.888 66.667 5.45 0.00 37.73 5.14
33 34 2.040988 TCCTGCATGGGATCCGGA 60.041 61.111 6.61 6.61 36.20 5.14
34 35 2.142761 TCCTGCATGGGATCCGGAG 61.143 63.158 11.34 2.54 36.20 4.63
49 50 2.374184 CCGGAGGCATAATTTTGTCCA 58.626 47.619 0.00 0.00 46.14 4.02
50 51 2.099098 CCGGAGGCATAATTTTGTCCAC 59.901 50.000 0.00 5.65 46.14 4.02
51 52 2.223249 CGGAGGCATAATTTTGTCCACG 60.223 50.000 10.32 6.23 0.00 4.94
52 53 2.752903 GGAGGCATAATTTTGTCCACGT 59.247 45.455 10.32 0.00 0.00 4.49
53 54 3.427503 GGAGGCATAATTTTGTCCACGTG 60.428 47.826 9.08 9.08 0.00 4.49
54 55 2.094752 AGGCATAATTTTGTCCACGTGC 60.095 45.455 10.91 0.00 0.00 5.34
55 56 1.910819 GCATAATTTTGTCCACGTGCG 59.089 47.619 10.91 3.66 0.00 5.34
56 57 2.514902 CATAATTTTGTCCACGTGCGG 58.485 47.619 10.91 0.00 0.00 5.69
57 58 1.880271 TAATTTTGTCCACGTGCGGA 58.120 45.000 10.91 0.00 0.00 5.54
58 59 0.591170 AATTTTGTCCACGTGCGGAG 59.409 50.000 10.91 0.00 35.10 4.63
59 60 0.250124 ATTTTGTCCACGTGCGGAGA 60.250 50.000 10.91 0.00 35.10 3.71
60 61 0.250124 TTTTGTCCACGTGCGGAGAT 60.250 50.000 10.91 0.00 35.10 2.75
61 62 0.669318 TTTGTCCACGTGCGGAGATC 60.669 55.000 10.91 0.00 35.10 2.75
62 63 1.811645 TTGTCCACGTGCGGAGATCA 61.812 55.000 10.91 0.98 35.10 2.92
63 64 1.517257 GTCCACGTGCGGAGATCAG 60.517 63.158 10.91 0.00 35.10 2.90
64 65 2.887568 CCACGTGCGGAGATCAGC 60.888 66.667 10.91 0.00 37.57 4.26
65 66 2.887568 CACGTGCGGAGATCAGCC 60.888 66.667 0.82 0.00 36.20 4.85
66 67 3.381983 ACGTGCGGAGATCAGCCA 61.382 61.111 2.51 0.00 36.20 4.75
67 68 2.125552 CGTGCGGAGATCAGCCAA 60.126 61.111 2.51 0.00 36.20 4.52
68 69 2.456119 CGTGCGGAGATCAGCCAAC 61.456 63.158 2.51 0.00 36.20 3.77
69 70 1.375908 GTGCGGAGATCAGCCAACA 60.376 57.895 2.51 0.00 36.20 3.33
70 71 1.078918 TGCGGAGATCAGCCAACAG 60.079 57.895 2.51 0.00 36.20 3.16
71 72 1.078848 GCGGAGATCAGCCAACAGT 60.079 57.895 0.00 0.00 0.00 3.55
72 73 1.364626 GCGGAGATCAGCCAACAGTG 61.365 60.000 0.00 0.00 0.00 3.66
73 74 1.364626 CGGAGATCAGCCAACAGTGC 61.365 60.000 0.00 0.00 0.00 4.40
74 75 0.035630 GGAGATCAGCCAACAGTGCT 60.036 55.000 0.00 0.00 40.41 4.40
88 89 2.433145 TGCTGCGCACTGTCTAGC 60.433 61.111 5.66 7.40 31.71 3.42
89 90 2.125753 GCTGCGCACTGTCTAGCT 60.126 61.111 5.66 0.00 0.00 3.32
90 91 2.164026 GCTGCGCACTGTCTAGCTC 61.164 63.158 5.66 0.00 0.00 4.09
91 92 1.213799 CTGCGCACTGTCTAGCTCA 59.786 57.895 5.66 0.00 0.00 4.26
92 93 0.179116 CTGCGCACTGTCTAGCTCAT 60.179 55.000 5.66 0.00 0.00 2.90
93 94 1.066152 CTGCGCACTGTCTAGCTCATA 59.934 52.381 5.66 0.00 0.00 2.15
94 95 1.066152 TGCGCACTGTCTAGCTCATAG 59.934 52.381 5.66 0.00 0.00 2.23
95 96 1.601663 GCGCACTGTCTAGCTCATAGG 60.602 57.143 0.30 0.00 31.83 2.57
96 97 1.000827 CGCACTGTCTAGCTCATAGGG 60.001 57.143 0.00 0.00 31.83 3.53
97 98 1.342819 GCACTGTCTAGCTCATAGGGG 59.657 57.143 0.00 0.00 31.83 4.79
98 99 2.950781 CACTGTCTAGCTCATAGGGGA 58.049 52.381 0.00 0.00 31.83 4.81
99 100 2.625790 CACTGTCTAGCTCATAGGGGAC 59.374 54.545 0.00 0.00 31.83 4.46
100 101 1.883275 CTGTCTAGCTCATAGGGGACG 59.117 57.143 0.00 0.00 31.83 4.79
101 102 1.214673 TGTCTAGCTCATAGGGGACGT 59.785 52.381 0.00 0.00 31.83 4.34
102 103 1.609555 GTCTAGCTCATAGGGGACGTG 59.390 57.143 0.00 0.00 31.83 4.49
103 104 0.315568 CTAGCTCATAGGGGACGTGC 59.684 60.000 0.00 0.00 0.00 5.34
104 105 1.113517 TAGCTCATAGGGGACGTGCC 61.114 60.000 19.24 19.24 0.00 5.01
105 106 2.731571 GCTCATAGGGGACGTGCCA 61.732 63.158 28.30 8.71 38.95 4.92
106 107 1.144057 CTCATAGGGGACGTGCCAC 59.856 63.158 28.30 16.70 41.99 5.01
107 108 2.189521 CATAGGGGACGTGCCACC 59.810 66.667 28.30 11.46 43.05 4.61
108 109 3.087906 ATAGGGGACGTGCCACCC 61.088 66.667 28.30 15.08 43.05 4.61
113 114 4.643387 GGACGTGCCACCCAGCTT 62.643 66.667 0.00 0.00 36.34 3.74
114 115 2.345991 GACGTGCCACCCAGCTTA 59.654 61.111 0.00 0.00 0.00 3.09
115 116 2.032071 ACGTGCCACCCAGCTTAC 59.968 61.111 0.00 0.00 0.00 2.34
116 117 3.118454 CGTGCCACCCAGCTTACG 61.118 66.667 0.00 0.00 0.00 3.18
117 118 2.345991 GTGCCACCCAGCTTACGA 59.654 61.111 0.00 0.00 0.00 3.43
118 119 1.078426 GTGCCACCCAGCTTACGAT 60.078 57.895 0.00 0.00 0.00 3.73
119 120 1.078497 TGCCACCCAGCTTACGATG 60.078 57.895 0.00 0.00 0.00 3.84
120 121 1.819632 GCCACCCAGCTTACGATGG 60.820 63.158 0.00 0.00 46.27 3.51
121 122 1.602237 CCACCCAGCTTACGATGGT 59.398 57.895 2.55 0.00 45.24 3.55
122 123 0.035439 CCACCCAGCTTACGATGGTT 60.035 55.000 2.55 0.00 45.24 3.67
123 124 1.613255 CCACCCAGCTTACGATGGTTT 60.613 52.381 2.55 0.00 45.24 3.27
124 125 1.468520 CACCCAGCTTACGATGGTTTG 59.531 52.381 2.55 0.00 45.24 2.93
125 126 1.094785 CCCAGCTTACGATGGTTTGG 58.905 55.000 2.55 0.00 45.24 3.28
126 127 0.451783 CCAGCTTACGATGGTTTGGC 59.548 55.000 0.00 0.00 41.77 4.52
127 128 1.453155 CAGCTTACGATGGTTTGGCT 58.547 50.000 0.00 0.00 0.00 4.75
128 129 2.627945 CAGCTTACGATGGTTTGGCTA 58.372 47.619 0.00 0.00 0.00 3.93
129 130 2.609459 CAGCTTACGATGGTTTGGCTAG 59.391 50.000 0.00 0.00 0.00 3.42
130 131 1.940613 GCTTACGATGGTTTGGCTAGG 59.059 52.381 0.00 0.00 0.00 3.02
131 132 1.940613 CTTACGATGGTTTGGCTAGGC 59.059 52.381 9.85 9.85 0.00 3.93
132 133 1.200519 TACGATGGTTTGGCTAGGCT 58.799 50.000 18.18 0.00 0.00 4.58
133 134 0.107654 ACGATGGTTTGGCTAGGCTC 60.108 55.000 18.18 4.42 0.00 4.70
134 135 0.815615 CGATGGTTTGGCTAGGCTCC 60.816 60.000 18.18 16.24 0.00 4.70
135 136 0.255890 GATGGTTTGGCTAGGCTCCA 59.744 55.000 22.29 22.29 0.00 3.86
136 137 0.257039 ATGGTTTGGCTAGGCTCCAG 59.743 55.000 23.47 0.00 34.66 3.86
137 138 1.077429 GGTTTGGCTAGGCTCCAGG 60.077 63.158 18.18 0.00 34.66 4.45
138 139 1.750780 GTTTGGCTAGGCTCCAGGC 60.751 63.158 18.18 4.00 41.43 4.85
147 148 4.796314 GCTCCAGGCCTGATGATC 57.204 61.111 34.91 15.24 34.27 2.92
148 149 2.144040 GCTCCAGGCCTGATGATCT 58.856 57.895 34.91 0.00 34.27 2.75
149 150 0.473326 GCTCCAGGCCTGATGATCTT 59.527 55.000 34.91 0.00 34.27 2.40
150 151 1.133853 GCTCCAGGCCTGATGATCTTT 60.134 52.381 34.91 0.00 34.27 2.52
151 152 2.573369 CTCCAGGCCTGATGATCTTTG 58.427 52.381 34.91 13.82 0.00 2.77
152 153 1.918262 TCCAGGCCTGATGATCTTTGT 59.082 47.619 34.91 0.00 0.00 2.83
153 154 2.092753 TCCAGGCCTGATGATCTTTGTC 60.093 50.000 34.91 0.00 0.00 3.18
154 155 2.356432 CCAGGCCTGATGATCTTTGTCA 60.356 50.000 34.91 0.00 0.00 3.58
155 156 3.552875 CAGGCCTGATGATCTTTGTCAT 58.447 45.455 29.88 0.00 41.36 3.06
156 157 4.445305 CCAGGCCTGATGATCTTTGTCATA 60.445 45.833 34.91 0.00 38.88 2.15
157 158 5.314529 CAGGCCTGATGATCTTTGTCATAT 58.685 41.667 29.88 0.00 38.88 1.78
158 159 5.768662 CAGGCCTGATGATCTTTGTCATATT 59.231 40.000 29.88 0.00 38.88 1.28
159 160 6.264744 CAGGCCTGATGATCTTTGTCATATTT 59.735 38.462 29.88 0.00 38.88 1.40
160 161 6.264744 AGGCCTGATGATCTTTGTCATATTTG 59.735 38.462 3.11 0.00 38.88 2.32
161 162 6.040166 GGCCTGATGATCTTTGTCATATTTGT 59.960 38.462 0.00 0.00 38.88 2.83
162 163 6.916387 GCCTGATGATCTTTGTCATATTTGTG 59.084 38.462 0.00 0.00 38.88 3.33
163 164 7.201758 GCCTGATGATCTTTGTCATATTTGTGA 60.202 37.037 0.00 0.00 38.88 3.58
164 165 8.680001 CCTGATGATCTTTGTCATATTTGTGAA 58.320 33.333 0.00 0.00 38.88 3.18
168 169 8.726650 TGATCTTTGTCATATTTGTGAAAACG 57.273 30.769 0.00 0.00 0.00 3.60
169 170 8.563732 TGATCTTTGTCATATTTGTGAAAACGA 58.436 29.630 0.00 0.00 30.93 3.85
170 171 8.955061 ATCTTTGTCATATTTGTGAAAACGAG 57.045 30.769 0.00 0.00 30.19 4.18
171 172 7.925993 TCTTTGTCATATTTGTGAAAACGAGT 58.074 30.769 0.00 0.00 0.00 4.18
172 173 7.855409 TCTTTGTCATATTTGTGAAAACGAGTG 59.145 33.333 0.00 0.00 0.00 3.51
173 174 6.612247 TGTCATATTTGTGAAAACGAGTGT 57.388 33.333 0.00 0.00 0.00 3.55
174 175 7.716768 TGTCATATTTGTGAAAACGAGTGTA 57.283 32.000 0.00 0.00 0.00 2.90
175 176 8.144155 TGTCATATTTGTGAAAACGAGTGTAA 57.856 30.769 0.00 0.00 0.00 2.41
176 177 8.065407 TGTCATATTTGTGAAAACGAGTGTAAC 58.935 33.333 0.00 0.00 0.00 2.50
177 178 8.065407 GTCATATTTGTGAAAACGAGTGTAACA 58.935 33.333 0.00 0.00 41.43 2.41
178 179 8.613482 TCATATTTGTGAAAACGAGTGTAACAA 58.387 29.630 0.00 0.00 41.43 2.83
179 180 9.393249 CATATTTGTGAAAACGAGTGTAACAAT 57.607 29.630 0.00 0.00 41.43 2.71
182 183 9.959749 ATTTGTGAAAACGAGTGTAACAATATT 57.040 25.926 0.00 0.00 41.43 1.28
183 184 9.790389 TTTGTGAAAACGAGTGTAACAATATTT 57.210 25.926 0.00 0.00 41.43 1.40
184 185 8.996988 TGTGAAAACGAGTGTAACAATATTTC 57.003 30.769 0.00 0.00 41.43 2.17
185 186 8.832521 TGTGAAAACGAGTGTAACAATATTTCT 58.167 29.630 0.00 0.00 41.43 2.52
186 187 9.659830 GTGAAAACGAGTGTAACAATATTTCTT 57.340 29.630 0.00 0.00 41.43 2.52
210 211 9.931210 CTTAATTAATACAATCTCGTTTCACCC 57.069 33.333 0.00 0.00 0.00 4.61
211 212 6.598753 ATTAATACAATCTCGTTTCACCCG 57.401 37.500 0.00 0.00 0.00 5.28
212 213 1.717194 TACAATCTCGTTTCACCCGC 58.283 50.000 0.00 0.00 0.00 6.13
213 214 0.250124 ACAATCTCGTTTCACCCGCA 60.250 50.000 0.00 0.00 0.00 5.69
214 215 0.871722 CAATCTCGTTTCACCCGCAA 59.128 50.000 0.00 0.00 0.00 4.85
215 216 1.265635 CAATCTCGTTTCACCCGCAAA 59.734 47.619 0.00 0.00 0.00 3.68
216 217 1.600023 ATCTCGTTTCACCCGCAAAA 58.400 45.000 0.00 0.00 0.00 2.44
217 218 1.380524 TCTCGTTTCACCCGCAAAAA 58.619 45.000 0.00 0.00 0.00 1.94
274 277 9.903682 ATCAAGCCTATTAATTTCGATTTGATG 57.096 29.630 0.00 0.00 32.24 3.07
306 309 6.514870 GCCATTGATATTTGCCAGTCGAATAA 60.515 38.462 0.00 0.00 35.31 1.40
325 328 1.377725 CCGATATGGCAGATGGGGC 60.378 63.158 14.59 0.00 0.00 5.80
346 349 2.274104 GGCATCAACCGGCCCTTA 59.726 61.111 0.00 0.00 44.53 2.69
360 368 3.153919 GGCCCTTAGTTGAACAATCACA 58.846 45.455 0.00 0.00 34.61 3.58
384 392 1.221840 CCGGCAGATGGTTAGCTGT 59.778 57.895 0.00 0.00 42.24 4.40
385 393 0.811616 CCGGCAGATGGTTAGCTGTC 60.812 60.000 0.00 0.00 42.24 3.51
386 394 0.108186 CGGCAGATGGTTAGCTGTCA 60.108 55.000 0.00 0.00 44.86 3.58
387 395 1.473965 CGGCAGATGGTTAGCTGTCAT 60.474 52.381 0.00 0.00 44.86 3.06
388 396 2.224042 CGGCAGATGGTTAGCTGTCATA 60.224 50.000 0.00 0.00 44.86 2.15
389 397 3.397482 GGCAGATGGTTAGCTGTCATAG 58.603 50.000 0.00 0.00 44.07 2.23
390 398 3.070159 GGCAGATGGTTAGCTGTCATAGA 59.930 47.826 0.00 0.00 44.07 1.98
391 399 4.054671 GCAGATGGTTAGCTGTCATAGAC 58.945 47.826 0.00 0.00 42.24 2.59
422 430 4.157472 CCAGCCATCTCTTCTTCCTTTTTC 59.843 45.833 0.00 0.00 0.00 2.29
539 548 5.047802 ACAAGAACTGGCAATCATTTGGTAG 60.048 40.000 3.18 0.00 33.22 3.18
540 549 4.666512 AGAACTGGCAATCATTTGGTAGT 58.333 39.130 3.18 0.00 33.22 2.73
541 550 5.815581 AGAACTGGCAATCATTTGGTAGTA 58.184 37.500 3.18 0.00 33.22 1.82
606 624 4.885907 CAGGACATGCACTAAAAGATGGAT 59.114 41.667 0.00 0.00 0.00 3.41
663 681 1.364626 CTGTGCTGATGCCGACCTTC 61.365 60.000 0.00 0.00 38.71 3.46
706 724 4.966965 TTTTTCTTCTTGGTTACACGCA 57.033 36.364 0.00 0.00 0.00 5.24
714 732 5.276461 TCTTGGTTACACGCATCATAGAT 57.724 39.130 0.00 0.00 0.00 1.98
846 906 4.468868 TCATCACCATTCATCAGTCTCACT 59.531 41.667 0.00 0.00 0.00 3.41
910 975 4.175337 ATGGTACCGCGCCAGCAT 62.175 61.111 14.63 14.63 45.49 3.79
1138 1208 0.099082 CTCTTACGGCCACTCGAGTC 59.901 60.000 16.96 5.28 0.00 3.36
1139 1209 1.226323 CTTACGGCCACTCGAGTCG 60.226 63.158 16.96 18.73 0.00 4.18
1250 1320 1.651987 CCGTGGACGCATACAAGAAT 58.348 50.000 0.00 0.00 38.18 2.40
1359 1429 6.183360 CGGAGATTTCCTCAGTGAGTATACAA 60.183 42.308 18.74 4.60 43.76 2.41
1360 1430 7.470702 CGGAGATTTCCTCAGTGAGTATACAAT 60.471 40.741 18.74 8.81 43.76 2.71
1361 1431 8.861086 GGAGATTTCCTCAGTGAGTATACAATA 58.139 37.037 18.74 0.00 43.76 1.90
1406 1476 1.266175 GCATCCATCCATCGCTCTTTG 59.734 52.381 0.00 0.00 0.00 2.77
1415 1485 3.616821 TCCATCGCTCTTTGATTACGTTG 59.383 43.478 0.00 0.00 0.00 4.10
1419 1489 3.062099 TCGCTCTTTGATTACGTTGCATC 59.938 43.478 0.00 0.00 0.00 3.91
1435 1544 1.608025 GCATCCGTCCAAGTTCAGTCA 60.608 52.381 0.00 0.00 0.00 3.41
1487 1608 5.646467 GCTTAATTAGCGTGGTATCGAAA 57.354 39.130 0.00 0.00 40.71 3.46
1488 1609 5.667175 GCTTAATTAGCGTGGTATCGAAAG 58.333 41.667 0.00 0.00 40.71 2.62
1489 1610 5.646467 TTAATTAGCGTGGTATCGAAAGC 57.354 39.130 0.00 0.00 0.00 3.51
1567 1691 2.736144 AAAGTGCAACATGCTCCATG 57.264 45.000 3.78 3.80 45.31 3.66
1630 1802 1.891150 GATGCAGGGCCATTATCAAGG 59.109 52.381 6.18 0.00 0.00 3.61
1661 1833 2.159934 CGTCTCCGTTTCGCGTAAAAAT 60.160 45.455 5.77 0.00 39.32 1.82
1662 1834 3.059306 CGTCTCCGTTTCGCGTAAAAATA 59.941 43.478 5.77 0.00 39.32 1.40
1666 1838 5.050499 TCTCCGTTTCGCGTAAAAATAAACA 60.050 36.000 5.77 0.00 39.32 2.83
1679 1873 8.885108 CGTAAAAATAAACAGACTAACCGTTTG 58.115 33.333 0.00 0.00 34.78 2.93
1790 1987 3.518998 CTCCGGCCTCGACGACAT 61.519 66.667 0.00 0.00 35.20 3.06
1884 2081 2.547218 GGGCAACACGTACTTCTTCTCA 60.547 50.000 0.00 0.00 39.74 3.27
1885 2082 2.475487 GGCAACACGTACTTCTTCTCAC 59.525 50.000 0.00 0.00 0.00 3.51
1926 2123 3.050275 GAGAACGGCCAGCGCTTT 61.050 61.111 7.50 0.00 34.44 3.51
2144 2341 5.017294 ACTCTAAATCTAGTCAGCTTGGC 57.983 43.478 0.00 0.00 0.00 4.52
2147 2344 0.905357 AATCTAGTCAGCTTGGCGGT 59.095 50.000 0.00 0.00 0.00 5.68
2305 2505 9.579932 TTATGTATATAAATTCACATGGGCACA 57.420 29.630 0.00 0.00 33.78 4.57
2306 2506 8.654485 ATGTATATAAATTCACATGGGCACAT 57.346 30.769 0.00 0.00 37.99 3.21
2312 2512 0.991146 TCACATGGGCACATACCTGT 59.009 50.000 0.00 0.00 34.99 4.00
2314 2514 0.107703 ACATGGGCACATACCTGTCG 60.108 55.000 0.00 0.00 34.99 4.35
2318 2518 1.521681 GGCACATACCTGTCGAGCC 60.522 63.158 0.00 0.00 35.55 4.70
2320 2520 1.511305 CACATACCTGTCGAGCCGT 59.489 57.895 0.00 0.00 31.62 5.68
2335 2535 4.473520 CGTGCCAGCTCCCCGATT 62.474 66.667 0.00 0.00 0.00 3.34
2345 2545 4.609018 CCCCGATTGCCTCGCGAT 62.609 66.667 10.36 0.00 46.25 4.58
2346 2546 3.038417 CCCGATTGCCTCGCGATC 61.038 66.667 10.36 2.26 46.25 3.69
2351 2551 3.371097 ATTGCCTCGCGATCCACGT 62.371 57.895 10.36 0.00 44.60 4.49
2357 2557 2.415843 CGCGATCCACGTGGGTAT 59.584 61.111 33.40 21.08 46.86 2.73
2358 2558 1.655885 CGCGATCCACGTGGGTATA 59.344 57.895 33.40 15.67 46.86 1.47
2359 2559 0.031043 CGCGATCCACGTGGGTATAA 59.969 55.000 33.40 15.25 46.86 0.98
2360 2560 1.494824 GCGATCCACGTGGGTATAAC 58.505 55.000 33.40 14.33 44.60 1.89
2361 2561 1.202440 GCGATCCACGTGGGTATAACA 60.202 52.381 33.40 13.66 44.60 2.41
2362 2562 2.466846 CGATCCACGTGGGTATAACAC 58.533 52.381 33.40 13.18 38.11 3.32
2373 2573 5.861725 GTGGGTATAACACGTTTTAAGAGC 58.138 41.667 0.00 0.19 0.00 4.09
2374 2574 5.409214 GTGGGTATAACACGTTTTAAGAGCA 59.591 40.000 0.00 0.00 0.00 4.26
2375 2575 6.093082 GTGGGTATAACACGTTTTAAGAGCAT 59.907 38.462 0.00 0.00 0.00 3.79
2376 2576 6.092944 TGGGTATAACACGTTTTAAGAGCATG 59.907 38.462 0.00 0.00 0.00 4.06
2377 2577 6.457799 GGGTATAACACGTTTTAAGAGCATGG 60.458 42.308 0.00 0.00 0.00 3.66
2378 2578 6.093082 GGTATAACACGTTTTAAGAGCATGGT 59.907 38.462 0.00 0.00 0.00 3.55
2379 2579 4.911514 AACACGTTTTAAGAGCATGGTT 57.088 36.364 0.00 0.00 0.00 3.67
2380 2580 7.675962 ATAACACGTTTTAAGAGCATGGTTA 57.324 32.000 0.00 0.00 0.00 2.85
2381 2581 6.380095 AACACGTTTTAAGAGCATGGTTAA 57.620 33.333 0.00 0.00 0.00 2.01
2382 2582 6.569179 ACACGTTTTAAGAGCATGGTTAAT 57.431 33.333 0.00 0.00 0.00 1.40
2383 2583 7.675962 ACACGTTTTAAGAGCATGGTTAATA 57.324 32.000 0.00 0.00 0.00 0.98
2384 2584 7.748847 ACACGTTTTAAGAGCATGGTTAATAG 58.251 34.615 0.00 0.00 0.00 1.73
2385 2585 7.389607 ACACGTTTTAAGAGCATGGTTAATAGT 59.610 33.333 0.00 0.00 0.00 2.12
2386 2586 8.875803 CACGTTTTAAGAGCATGGTTAATAGTA 58.124 33.333 0.00 0.00 0.00 1.82
2387 2587 9.609346 ACGTTTTAAGAGCATGGTTAATAGTAT 57.391 29.630 0.00 0.00 0.00 2.12
2391 2591 9.720769 TTTAAGAGCATGGTTAATAGTATAGCC 57.279 33.333 0.00 0.00 0.00 3.93
2392 2592 5.967088 AGAGCATGGTTAATAGTATAGCCG 58.033 41.667 0.00 0.00 0.00 5.52
2393 2593 5.086104 AGCATGGTTAATAGTATAGCCGG 57.914 43.478 0.00 0.00 0.00 6.13
2394 2594 3.621715 GCATGGTTAATAGTATAGCCGGC 59.378 47.826 21.89 21.89 0.00 6.13
2395 2595 4.623171 GCATGGTTAATAGTATAGCCGGCT 60.623 45.833 34.85 34.85 31.18 5.52
2396 2596 4.530710 TGGTTAATAGTATAGCCGGCTG 57.469 45.455 38.98 0.00 0.00 4.85
2397 2597 3.259902 GGTTAATAGTATAGCCGGCTGC 58.740 50.000 38.98 26.31 41.71 5.25
2407 2607 4.291047 CCGGCTGCTGGCTATATG 57.709 61.111 15.72 0.00 41.46 1.78
2408 2608 1.673477 CCGGCTGCTGGCTATATGA 59.327 57.895 15.72 0.00 41.46 2.15
2409 2609 0.251354 CCGGCTGCTGGCTATATGAT 59.749 55.000 15.72 0.00 41.46 2.45
2410 2610 1.366679 CGGCTGCTGGCTATATGATG 58.633 55.000 15.09 0.00 41.46 3.07
2411 2611 1.338484 CGGCTGCTGGCTATATGATGT 60.338 52.381 15.09 0.00 41.46 3.06
2412 2612 2.787994 GGCTGCTGGCTATATGATGTT 58.212 47.619 10.05 0.00 41.46 2.71
2413 2613 2.486982 GGCTGCTGGCTATATGATGTTG 59.513 50.000 10.05 0.00 41.46 3.33
2414 2614 2.095364 GCTGCTGGCTATATGATGTTGC 60.095 50.000 0.00 0.00 38.06 4.17
2415 2615 2.486982 CTGCTGGCTATATGATGTTGCC 59.513 50.000 7.62 7.62 43.49 4.52
2420 2620 4.691860 GGCTATATGATGTTGCCATGTC 57.308 45.455 9.49 0.00 42.79 3.06
2421 2621 4.074259 GGCTATATGATGTTGCCATGTCA 58.926 43.478 9.49 0.00 42.79 3.58
2422 2622 4.703575 GGCTATATGATGTTGCCATGTCAT 59.296 41.667 9.49 0.00 42.79 3.06
2423 2623 5.882000 GGCTATATGATGTTGCCATGTCATA 59.118 40.000 9.49 4.48 42.79 2.15
2424 2624 6.544931 GGCTATATGATGTTGCCATGTCATAT 59.455 38.462 9.49 14.90 42.79 1.78
2425 2625 7.716560 GGCTATATGATGTTGCCATGTCATATA 59.283 37.037 9.49 15.35 42.79 0.86
2426 2626 8.771766 GCTATATGATGTTGCCATGTCATATAG 58.228 37.037 26.19 26.19 42.88 1.31
2428 2628 8.959705 ATATGATGTTGCCATGTCATATAGAG 57.040 34.615 10.82 0.00 31.60 2.43
2429 2629 4.999311 TGATGTTGCCATGTCATATAGAGC 59.001 41.667 0.00 0.00 0.00 4.09
2430 2630 4.694760 TGTTGCCATGTCATATAGAGCT 57.305 40.909 0.00 0.00 0.00 4.09
2431 2631 5.806654 TGTTGCCATGTCATATAGAGCTA 57.193 39.130 0.00 0.00 0.00 3.32
2432 2632 6.364568 TGTTGCCATGTCATATAGAGCTAT 57.635 37.500 0.00 0.00 0.00 2.97
2433 2633 6.401394 TGTTGCCATGTCATATAGAGCTATC 58.599 40.000 0.00 0.00 0.00 2.08
2434 2634 6.014327 TGTTGCCATGTCATATAGAGCTATCA 60.014 38.462 0.00 0.00 0.00 2.15
2435 2635 6.218108 TGCCATGTCATATAGAGCTATCAG 57.782 41.667 0.00 0.00 0.00 2.90
2436 2636 5.718607 TGCCATGTCATATAGAGCTATCAGT 59.281 40.000 0.00 0.00 0.00 3.41
2437 2637 6.212187 TGCCATGTCATATAGAGCTATCAGTT 59.788 38.462 0.00 0.00 0.00 3.16
2438 2638 6.534436 GCCATGTCATATAGAGCTATCAGTTG 59.466 42.308 0.00 0.00 0.00 3.16
2439 2639 7.609960 CCATGTCATATAGAGCTATCAGTTGT 58.390 38.462 0.00 0.00 0.00 3.32
2440 2640 8.743714 CCATGTCATATAGAGCTATCAGTTGTA 58.256 37.037 0.00 0.00 0.00 2.41
2441 2641 9.786105 CATGTCATATAGAGCTATCAGTTGTAG 57.214 37.037 0.00 0.00 0.00 2.74
2442 2642 7.821652 TGTCATATAGAGCTATCAGTTGTAGC 58.178 38.462 0.00 0.00 43.77 3.58
2443 2643 7.094162 TGTCATATAGAGCTATCAGTTGTAGCC 60.094 40.741 1.83 0.00 44.35 3.93
2444 2644 6.948309 TCATATAGAGCTATCAGTTGTAGCCA 59.052 38.462 1.83 0.00 44.35 4.75
2445 2645 3.810310 AGAGCTATCAGTTGTAGCCAC 57.190 47.619 1.83 0.00 44.35 5.01
2446 2646 3.370104 AGAGCTATCAGTTGTAGCCACT 58.630 45.455 1.83 0.45 44.35 4.00
2447 2647 3.383185 AGAGCTATCAGTTGTAGCCACTC 59.617 47.826 1.83 0.00 44.35 3.51
2448 2648 3.099905 AGCTATCAGTTGTAGCCACTCA 58.900 45.455 1.83 0.00 44.35 3.41
2449 2649 3.708631 AGCTATCAGTTGTAGCCACTCAT 59.291 43.478 1.83 0.00 44.35 2.90
2450 2650 4.895889 AGCTATCAGTTGTAGCCACTCATA 59.104 41.667 1.83 0.00 44.35 2.15
2451 2651 4.985409 GCTATCAGTTGTAGCCACTCATAC 59.015 45.833 0.00 0.00 38.85 2.39
2452 2652 5.451937 GCTATCAGTTGTAGCCACTCATACA 60.452 44.000 0.00 0.00 38.85 2.29
2453 2653 4.882842 TCAGTTGTAGCCACTCATACAA 57.117 40.909 0.00 0.00 39.06 2.41
2454 2654 5.420725 TCAGTTGTAGCCACTCATACAAT 57.579 39.130 1.57 0.00 42.21 2.71
2455 2655 6.538945 TCAGTTGTAGCCACTCATACAATA 57.461 37.500 1.57 0.00 42.21 1.90
2456 2656 6.941857 TCAGTTGTAGCCACTCATACAATAA 58.058 36.000 1.57 0.00 42.21 1.40
2457 2657 7.041721 TCAGTTGTAGCCACTCATACAATAAG 58.958 38.462 1.57 0.00 42.21 1.73
2458 2658 6.258727 CAGTTGTAGCCACTCATACAATAAGG 59.741 42.308 1.57 0.00 42.21 2.69
2459 2659 5.950544 TGTAGCCACTCATACAATAAGGT 57.049 39.130 0.00 0.00 0.00 3.50
2460 2660 6.308015 TGTAGCCACTCATACAATAAGGTT 57.692 37.500 0.00 0.00 0.00 3.50
2461 2661 6.112734 TGTAGCCACTCATACAATAAGGTTG 58.887 40.000 0.00 0.00 0.00 3.77
2462 2662 4.526970 AGCCACTCATACAATAAGGTTGG 58.473 43.478 0.00 0.00 0.00 3.77
2463 2663 3.066760 GCCACTCATACAATAAGGTTGGC 59.933 47.826 0.00 0.00 0.00 4.52
2464 2664 4.526970 CCACTCATACAATAAGGTTGGCT 58.473 43.478 0.00 0.00 0.00 4.75
2465 2665 5.680619 CCACTCATACAATAAGGTTGGCTA 58.319 41.667 0.00 0.00 0.00 3.93
2466 2666 6.299141 CCACTCATACAATAAGGTTGGCTAT 58.701 40.000 0.00 0.00 0.00 2.97
2467 2667 7.450074 CCACTCATACAATAAGGTTGGCTATA 58.550 38.462 0.00 0.00 0.00 1.31
2468 2668 7.936847 CCACTCATACAATAAGGTTGGCTATAA 59.063 37.037 0.00 0.00 0.00 0.98
2469 2669 8.993121 CACTCATACAATAAGGTTGGCTATAAG 58.007 37.037 0.00 0.00 0.00 1.73
2470 2670 8.934697 ACTCATACAATAAGGTTGGCTATAAGA 58.065 33.333 0.00 0.00 0.00 2.10
2471 2671 9.778741 CTCATACAATAAGGTTGGCTATAAGAA 57.221 33.333 0.00 0.00 0.00 2.52
2535 2735 6.681729 TTTATTGTATCGGCCTAGGAATCT 57.318 37.500 14.75 0.00 0.00 2.40
2536 2736 4.543590 ATTGTATCGGCCTAGGAATCTG 57.456 45.455 14.75 0.00 0.00 2.90
2537 2737 1.618837 TGTATCGGCCTAGGAATCTGC 59.381 52.381 14.75 0.00 0.00 4.26
2538 2738 1.618837 GTATCGGCCTAGGAATCTGCA 59.381 52.381 14.75 0.00 0.00 4.41
2539 2739 1.356124 ATCGGCCTAGGAATCTGCAT 58.644 50.000 14.75 0.00 0.00 3.96
2540 2740 2.009681 TCGGCCTAGGAATCTGCATA 57.990 50.000 14.75 0.00 0.00 3.14
2541 2741 2.540383 TCGGCCTAGGAATCTGCATAT 58.460 47.619 14.75 0.00 0.00 1.78
2542 2742 3.708451 TCGGCCTAGGAATCTGCATATA 58.292 45.455 14.75 0.00 0.00 0.86
2543 2743 3.701542 TCGGCCTAGGAATCTGCATATAG 59.298 47.826 14.75 0.00 0.00 1.31
2544 2744 3.739519 CGGCCTAGGAATCTGCATATAGC 60.740 52.174 14.75 0.00 45.96 2.97
2545 2745 3.454082 GGCCTAGGAATCTGCATATAGCT 59.546 47.826 14.75 0.00 45.94 3.32
2546 2746 4.651503 GGCCTAGGAATCTGCATATAGCTA 59.348 45.833 14.75 0.00 45.94 3.32
2547 2747 5.221422 GGCCTAGGAATCTGCATATAGCTAG 60.221 48.000 14.75 0.00 45.94 3.42
2548 2748 5.738783 GCCTAGGAATCTGCATATAGCTAGC 60.739 48.000 14.75 6.62 45.94 3.42
2549 2749 4.751767 AGGAATCTGCATATAGCTAGCC 57.248 45.455 12.13 0.00 45.94 3.93
2550 2750 4.360889 AGGAATCTGCATATAGCTAGCCT 58.639 43.478 12.13 1.34 45.94 4.58
2551 2751 4.405358 AGGAATCTGCATATAGCTAGCCTC 59.595 45.833 12.13 0.00 45.94 4.70
2552 2752 4.405358 GGAATCTGCATATAGCTAGCCTCT 59.595 45.833 12.13 0.00 45.94 3.69
2553 2753 5.104982 GGAATCTGCATATAGCTAGCCTCTT 60.105 44.000 12.13 0.00 45.94 2.85
2554 2754 4.797800 TCTGCATATAGCTAGCCTCTTG 57.202 45.455 12.13 6.05 45.94 3.02
2555 2755 3.056250 TCTGCATATAGCTAGCCTCTTGC 60.056 47.826 12.13 16.05 45.94 4.01
2556 2756 2.634453 TGCATATAGCTAGCCTCTTGCA 59.366 45.455 21.89 21.89 45.94 4.08
2557 2757 3.262660 TGCATATAGCTAGCCTCTTGCAT 59.737 43.478 21.89 2.14 45.94 3.96
2558 2758 3.622163 GCATATAGCTAGCCTCTTGCATG 59.378 47.826 12.13 6.86 41.08 4.06
2559 2759 4.622457 GCATATAGCTAGCCTCTTGCATGA 60.622 45.833 12.13 1.92 41.08 3.07
2560 2760 3.681593 ATAGCTAGCCTCTTGCATGAG 57.318 47.619 20.00 20.00 44.83 2.90
2561 2761 1.493861 AGCTAGCCTCTTGCATGAGA 58.506 50.000 26.59 9.40 44.83 3.27
2562 2762 1.413445 AGCTAGCCTCTTGCATGAGAG 59.587 52.381 26.59 17.86 44.83 3.20
2563 2763 1.868469 CTAGCCTCTTGCATGAGAGC 58.132 55.000 26.59 24.86 44.83 4.09
2564 2764 0.467384 TAGCCTCTTGCATGAGAGCC 59.533 55.000 26.59 9.47 44.83 4.70
2565 2765 1.823041 GCCTCTTGCATGAGAGCCC 60.823 63.158 26.59 9.19 41.46 5.19
2566 2766 1.605992 CCTCTTGCATGAGAGCCCA 59.394 57.895 26.59 0.00 41.46 5.36
2567 2767 0.747283 CCTCTTGCATGAGAGCCCAC 60.747 60.000 26.59 0.00 41.46 4.61
2568 2768 0.252479 CTCTTGCATGAGAGCCCACT 59.748 55.000 21.89 0.00 37.01 4.00
2569 2769 0.251354 TCTTGCATGAGAGCCCACTC 59.749 55.000 0.00 0.00 43.82 3.51
2570 2770 0.747283 CTTGCATGAGAGCCCACTCC 60.747 60.000 0.00 0.00 44.65 3.85
2571 2771 1.203441 TTGCATGAGAGCCCACTCCT 61.203 55.000 0.00 0.00 44.65 3.69
2572 2772 1.145819 GCATGAGAGCCCACTCCTC 59.854 63.158 0.00 0.00 44.65 3.71
2573 2773 1.336632 GCATGAGAGCCCACTCCTCT 61.337 60.000 0.00 0.00 44.65 3.69
2576 2776 4.451544 AGAGCCCACTCCTCTCAC 57.548 61.111 0.00 0.00 44.65 3.51
2577 2777 1.780327 AGAGCCCACTCCTCTCACT 59.220 57.895 0.00 0.00 44.65 3.41
2578 2778 0.116143 AGAGCCCACTCCTCTCACTT 59.884 55.000 0.00 0.00 44.65 3.16
2579 2779 0.980423 GAGCCCACTCCTCTCACTTT 59.020 55.000 0.00 0.00 36.90 2.66
2580 2780 1.349357 GAGCCCACTCCTCTCACTTTT 59.651 52.381 0.00 0.00 36.90 2.27
2581 2781 1.777272 AGCCCACTCCTCTCACTTTTT 59.223 47.619 0.00 0.00 0.00 1.94
2582 2782 2.155279 GCCCACTCCTCTCACTTTTTC 58.845 52.381 0.00 0.00 0.00 2.29
2583 2783 2.487265 GCCCACTCCTCTCACTTTTTCA 60.487 50.000 0.00 0.00 0.00 2.69
2584 2784 3.812167 GCCCACTCCTCTCACTTTTTCAT 60.812 47.826 0.00 0.00 0.00 2.57
2585 2785 3.755378 CCCACTCCTCTCACTTTTTCATG 59.245 47.826 0.00 0.00 0.00 3.07
2586 2786 4.392940 CCACTCCTCTCACTTTTTCATGT 58.607 43.478 0.00 0.00 0.00 3.21
2587 2787 4.453819 CCACTCCTCTCACTTTTTCATGTC 59.546 45.833 0.00 0.00 0.00 3.06
2588 2788 5.303971 CACTCCTCTCACTTTTTCATGTCT 58.696 41.667 0.00 0.00 0.00 3.41
2589 2789 5.407995 CACTCCTCTCACTTTTTCATGTCTC 59.592 44.000 0.00 0.00 0.00 3.36
2590 2790 5.306678 ACTCCTCTCACTTTTTCATGTCTCT 59.693 40.000 0.00 0.00 0.00 3.10
2591 2791 6.179906 TCCTCTCACTTTTTCATGTCTCTT 57.820 37.500 0.00 0.00 0.00 2.85
2592 2792 6.595682 TCCTCTCACTTTTTCATGTCTCTTT 58.404 36.000 0.00 0.00 0.00 2.52
2593 2793 6.708054 TCCTCTCACTTTTTCATGTCTCTTTC 59.292 38.462 0.00 0.00 0.00 2.62
2594 2794 6.072783 CCTCTCACTTTTTCATGTCTCTTTCC 60.073 42.308 0.00 0.00 0.00 3.13
2595 2795 6.595682 TCTCACTTTTTCATGTCTCTTTCCT 58.404 36.000 0.00 0.00 0.00 3.36
2596 2796 6.708054 TCTCACTTTTTCATGTCTCTTTCCTC 59.292 38.462 0.00 0.00 0.00 3.71
2597 2797 5.765182 TCACTTTTTCATGTCTCTTTCCTCC 59.235 40.000 0.00 0.00 0.00 4.30
2598 2798 5.532406 CACTTTTTCATGTCTCTTTCCTCCA 59.468 40.000 0.00 0.00 0.00 3.86
2599 2799 5.532779 ACTTTTTCATGTCTCTTTCCTCCAC 59.467 40.000 0.00 0.00 0.00 4.02
2600 2800 4.705110 TTTCATGTCTCTTTCCTCCACA 57.295 40.909 0.00 0.00 0.00 4.17
2601 2801 4.916041 TTCATGTCTCTTTCCTCCACAT 57.084 40.909 0.00 0.00 0.00 3.21
2602 2802 4.478206 TCATGTCTCTTTCCTCCACATC 57.522 45.455 0.00 0.00 0.00 3.06
2603 2803 3.118992 TCATGTCTCTTTCCTCCACATCG 60.119 47.826 0.00 0.00 0.00 3.84
2604 2804 1.550524 TGTCTCTTTCCTCCACATCGG 59.449 52.381 0.00 0.00 0.00 4.18
2605 2805 0.537188 TCTCTTTCCTCCACATCGGC 59.463 55.000 0.00 0.00 33.14 5.54
2606 2806 0.250234 CTCTTTCCTCCACATCGGCA 59.750 55.000 0.00 0.00 33.14 5.69
2607 2807 0.690192 TCTTTCCTCCACATCGGCAA 59.310 50.000 0.00 0.00 33.14 4.52
2608 2808 1.073125 TCTTTCCTCCACATCGGCAAA 59.927 47.619 0.00 0.00 33.14 3.68
2609 2809 1.885887 CTTTCCTCCACATCGGCAAAA 59.114 47.619 0.00 0.00 33.14 2.44
2610 2810 2.214376 TTCCTCCACATCGGCAAAAT 57.786 45.000 0.00 0.00 33.14 1.82
2611 2811 2.214376 TCCTCCACATCGGCAAAATT 57.786 45.000 0.00 0.00 33.14 1.82
2612 2812 1.818060 TCCTCCACATCGGCAAAATTG 59.182 47.619 0.00 0.00 33.14 2.32
2625 2825 2.270047 CAAAATTGCCATGTAAGCGGG 58.730 47.619 0.00 0.00 0.00 6.13
2629 2829 4.800554 GCCATGTAAGCGGGCTAT 57.199 55.556 0.00 0.00 44.32 2.97
2630 2830 3.927555 GCCATGTAAGCGGGCTATA 57.072 52.632 0.00 0.00 44.32 1.31
2631 2831 2.178912 GCCATGTAAGCGGGCTATAA 57.821 50.000 0.00 0.00 44.32 0.98
2632 2832 2.076863 GCCATGTAAGCGGGCTATAAG 58.923 52.381 0.00 0.00 44.32 1.73
2633 2833 2.076863 CCATGTAAGCGGGCTATAAGC 58.923 52.381 0.00 0.00 41.46 3.09
2728 2931 2.757314 TCCAAGTTTGCACATCACACAA 59.243 40.909 0.00 0.00 0.00 3.33
2790 3009 5.689383 AACACATCAAATAGTTCGCAAGT 57.311 34.783 0.00 0.00 39.48 3.16
3230 3460 0.107508 CATGGTTCGCATCCTCCAGT 60.108 55.000 0.00 0.00 33.33 4.00
3241 3471 4.649692 GCATCCTCCAGTGATTCACATAT 58.350 43.478 18.57 0.00 36.74 1.78
3244 3474 6.473758 CATCCTCCAGTGATTCACATATCAT 58.526 40.000 18.57 1.29 36.94 2.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.033894 AGGACCCTCTTCGTCTCCTC 60.034 60.000 0.00 0.00 0.00 3.71
1 2 0.323908 CAGGACCCTCTTCGTCTCCT 60.324 60.000 0.00 0.00 0.00 3.69
2 3 1.950973 GCAGGACCCTCTTCGTCTCC 61.951 65.000 0.00 0.00 0.00 3.71
3 4 1.251527 TGCAGGACCCTCTTCGTCTC 61.252 60.000 0.00 0.00 0.00 3.36
4 5 0.616111 ATGCAGGACCCTCTTCGTCT 60.616 55.000 0.00 0.00 0.00 4.18
6 7 1.599047 CATGCAGGACCCTCTTCGT 59.401 57.895 0.00 0.00 0.00 3.85
7 8 1.153289 CCATGCAGGACCCTCTTCG 60.153 63.158 0.00 0.00 41.22 3.79
8 9 1.225704 CCCATGCAGGACCCTCTTC 59.774 63.158 0.00 0.00 41.22 2.87
9 10 0.625683 ATCCCATGCAGGACCCTCTT 60.626 55.000 0.00 0.00 39.24 2.85
10 11 1.005289 ATCCCATGCAGGACCCTCT 59.995 57.895 0.00 0.00 39.24 3.69
11 12 1.453669 GATCCCATGCAGGACCCTC 59.546 63.158 0.00 0.00 39.24 4.30
12 13 2.081161 GGATCCCATGCAGGACCCT 61.081 63.158 0.00 0.00 39.24 4.34
13 14 2.517919 GGATCCCATGCAGGACCC 59.482 66.667 0.00 0.00 39.24 4.46
14 15 2.111878 CGGATCCCATGCAGGACC 59.888 66.667 6.06 2.02 39.24 4.46
15 16 2.111878 CCGGATCCCATGCAGGAC 59.888 66.667 6.06 0.00 39.24 3.85
16 17 2.040988 TCCGGATCCCATGCAGGA 60.041 61.111 6.06 2.63 41.22 3.86
17 18 2.429058 CTCCGGATCCCATGCAGG 59.571 66.667 3.57 0.00 37.03 4.85
18 19 2.429058 CCTCCGGATCCCATGCAG 59.571 66.667 3.57 0.00 0.00 4.41
19 20 3.877450 GCCTCCGGATCCCATGCA 61.877 66.667 3.57 0.00 0.00 3.96
20 21 1.841302 TATGCCTCCGGATCCCATGC 61.841 60.000 3.57 4.72 0.00 4.06
21 22 0.692476 TTATGCCTCCGGATCCCATG 59.308 55.000 3.57 0.00 0.00 3.66
22 23 1.673767 ATTATGCCTCCGGATCCCAT 58.326 50.000 3.57 10.59 0.00 4.00
23 24 1.444933 AATTATGCCTCCGGATCCCA 58.555 50.000 3.57 2.53 0.00 4.37
24 25 2.558359 CAAAATTATGCCTCCGGATCCC 59.442 50.000 3.57 0.00 0.00 3.85
25 26 3.222603 ACAAAATTATGCCTCCGGATCC 58.777 45.455 3.57 0.00 0.00 3.36
26 27 3.253432 GGACAAAATTATGCCTCCGGATC 59.747 47.826 3.57 0.00 0.00 3.36
27 28 3.222603 GGACAAAATTATGCCTCCGGAT 58.777 45.455 3.57 0.00 0.00 4.18
28 29 2.025793 TGGACAAAATTATGCCTCCGGA 60.026 45.455 2.93 2.93 0.00 5.14
29 30 2.099098 GTGGACAAAATTATGCCTCCGG 59.901 50.000 0.00 0.00 0.00 5.14
30 31 2.223249 CGTGGACAAAATTATGCCTCCG 60.223 50.000 0.00 0.00 0.00 4.63
31 32 2.752903 ACGTGGACAAAATTATGCCTCC 59.247 45.455 0.00 0.00 0.00 4.30
32 33 3.758300 CACGTGGACAAAATTATGCCTC 58.242 45.455 7.95 0.00 0.00 4.70
33 34 2.094752 GCACGTGGACAAAATTATGCCT 60.095 45.455 18.88 0.00 0.00 4.75
34 35 2.258755 GCACGTGGACAAAATTATGCC 58.741 47.619 18.88 0.00 0.00 4.40
35 36 1.910819 CGCACGTGGACAAAATTATGC 59.089 47.619 18.88 0.00 0.00 3.14
36 37 2.160615 TCCGCACGTGGACAAAATTATG 59.839 45.455 18.88 0.00 31.53 1.90
37 38 2.418628 CTCCGCACGTGGACAAAATTAT 59.581 45.455 18.88 0.00 33.48 1.28
38 39 1.801771 CTCCGCACGTGGACAAAATTA 59.198 47.619 18.88 0.00 33.48 1.40
39 40 0.591170 CTCCGCACGTGGACAAAATT 59.409 50.000 18.88 0.00 33.48 1.82
40 41 0.250124 TCTCCGCACGTGGACAAAAT 60.250 50.000 18.88 0.00 33.48 1.82
41 42 0.250124 ATCTCCGCACGTGGACAAAA 60.250 50.000 18.88 0.00 33.48 2.44
42 43 0.669318 GATCTCCGCACGTGGACAAA 60.669 55.000 18.88 0.00 33.48 2.83
43 44 1.080093 GATCTCCGCACGTGGACAA 60.080 57.895 18.88 0.00 33.48 3.18
44 45 2.212900 CTGATCTCCGCACGTGGACA 62.213 60.000 18.88 6.24 33.48 4.02
45 46 1.517257 CTGATCTCCGCACGTGGAC 60.517 63.158 18.88 0.00 33.48 4.02
46 47 2.885113 CTGATCTCCGCACGTGGA 59.115 61.111 18.88 6.02 36.37 4.02
47 48 2.887568 GCTGATCTCCGCACGTGG 60.888 66.667 18.88 7.38 0.00 4.94
48 49 2.887568 GGCTGATCTCCGCACGTG 60.888 66.667 12.28 12.28 0.00 4.49
49 50 2.942796 TTGGCTGATCTCCGCACGT 61.943 57.895 0.00 0.00 0.00 4.49
50 51 2.125552 TTGGCTGATCTCCGCACG 60.126 61.111 0.00 0.00 0.00 5.34
51 52 1.364626 CTGTTGGCTGATCTCCGCAC 61.365 60.000 0.00 0.00 0.00 5.34
52 53 1.078918 CTGTTGGCTGATCTCCGCA 60.079 57.895 0.00 0.00 0.00 5.69
53 54 1.078848 ACTGTTGGCTGATCTCCGC 60.079 57.895 0.00 0.00 0.00 5.54
54 55 1.364626 GCACTGTTGGCTGATCTCCG 61.365 60.000 0.00 0.00 0.00 4.63
55 56 0.035630 AGCACTGTTGGCTGATCTCC 60.036 55.000 0.00 0.00 40.80 3.71
56 57 3.547567 AGCACTGTTGGCTGATCTC 57.452 52.632 0.00 0.00 40.80 2.75
73 74 0.179116 ATGAGCTAGACAGTGCGCAG 60.179 55.000 12.22 1.57 41.71 5.18
74 75 1.066152 CTATGAGCTAGACAGTGCGCA 59.934 52.381 5.66 5.66 42.50 6.09
75 76 1.601663 CCTATGAGCTAGACAGTGCGC 60.602 57.143 0.00 0.00 0.00 6.09
76 77 1.000827 CCCTATGAGCTAGACAGTGCG 60.001 57.143 0.00 0.00 0.00 5.34
77 78 1.342819 CCCCTATGAGCTAGACAGTGC 59.657 57.143 0.00 0.00 0.00 4.40
78 79 2.625790 GTCCCCTATGAGCTAGACAGTG 59.374 54.545 0.00 0.00 0.00 3.66
79 80 2.750135 CGTCCCCTATGAGCTAGACAGT 60.750 54.545 0.00 0.00 0.00 3.55
80 81 1.883275 CGTCCCCTATGAGCTAGACAG 59.117 57.143 0.00 0.00 0.00 3.51
81 82 1.214673 ACGTCCCCTATGAGCTAGACA 59.785 52.381 0.00 0.00 0.00 3.41
82 83 1.609555 CACGTCCCCTATGAGCTAGAC 59.390 57.143 0.00 0.00 0.00 2.59
83 84 1.982660 CACGTCCCCTATGAGCTAGA 58.017 55.000 0.00 0.00 0.00 2.43
84 85 0.315568 GCACGTCCCCTATGAGCTAG 59.684 60.000 0.00 0.00 0.00 3.42
85 86 1.113517 GGCACGTCCCCTATGAGCTA 61.114 60.000 0.00 0.00 31.94 3.32
86 87 2.435693 GGCACGTCCCCTATGAGCT 61.436 63.158 0.00 0.00 31.94 4.09
87 88 2.109181 GGCACGTCCCCTATGAGC 59.891 66.667 0.00 0.00 0.00 4.26
88 89 1.144057 GTGGCACGTCCCCTATGAG 59.856 63.158 0.00 0.00 0.00 2.90
89 90 2.363975 GGTGGCACGTCCCCTATGA 61.364 63.158 12.17 0.00 0.00 2.15
90 91 2.189521 GGTGGCACGTCCCCTATG 59.810 66.667 12.17 0.00 0.00 2.23
91 92 3.087906 GGGTGGCACGTCCCCTAT 61.088 66.667 12.17 0.00 38.75 2.57
92 93 4.642488 TGGGTGGCACGTCCCCTA 62.642 66.667 12.17 0.00 42.78 3.53
96 97 3.248446 TAAGCTGGGTGGCACGTCC 62.248 63.158 12.17 8.79 34.17 4.79
97 98 2.033194 GTAAGCTGGGTGGCACGTC 61.033 63.158 12.17 7.09 34.17 4.34
98 99 2.032071 GTAAGCTGGGTGGCACGT 59.968 61.111 12.17 0.00 34.17 4.49
99 100 2.852495 ATCGTAAGCTGGGTGGCACG 62.852 60.000 12.17 0.00 34.45 5.34
100 101 1.078426 ATCGTAAGCTGGGTGGCAC 60.078 57.895 9.70 9.70 34.17 5.01
101 102 1.078497 CATCGTAAGCTGGGTGGCA 60.078 57.895 0.00 0.00 34.17 4.92
102 103 3.813596 CATCGTAAGCTGGGTGGC 58.186 61.111 0.00 0.00 37.18 5.01
108 109 1.453155 AGCCAAACCATCGTAAGCTG 58.547 50.000 0.00 0.00 37.18 4.24
109 110 2.420129 CCTAGCCAAACCATCGTAAGCT 60.420 50.000 0.00 0.00 37.18 3.74
110 111 1.940613 CCTAGCCAAACCATCGTAAGC 59.059 52.381 0.00 0.00 37.18 3.09
111 112 1.940613 GCCTAGCCAAACCATCGTAAG 59.059 52.381 0.00 0.00 0.00 2.34
112 113 1.557832 AGCCTAGCCAAACCATCGTAA 59.442 47.619 0.00 0.00 0.00 3.18
113 114 1.138266 GAGCCTAGCCAAACCATCGTA 59.862 52.381 0.00 0.00 0.00 3.43
114 115 0.107654 GAGCCTAGCCAAACCATCGT 60.108 55.000 0.00 0.00 0.00 3.73
115 116 0.815615 GGAGCCTAGCCAAACCATCG 60.816 60.000 0.00 0.00 0.00 3.84
116 117 0.255890 TGGAGCCTAGCCAAACCATC 59.744 55.000 0.00 0.00 31.13 3.51
117 118 0.257039 CTGGAGCCTAGCCAAACCAT 59.743 55.000 0.00 0.00 34.44 3.55
118 119 1.685224 CTGGAGCCTAGCCAAACCA 59.315 57.895 0.00 0.00 34.44 3.67
119 120 1.077429 CCTGGAGCCTAGCCAAACC 60.077 63.158 0.00 0.00 34.44 3.27
120 121 1.750780 GCCTGGAGCCTAGCCAAAC 60.751 63.158 0.00 0.00 34.44 2.93
121 122 2.677228 GCCTGGAGCCTAGCCAAA 59.323 61.111 0.00 0.00 34.44 3.28
130 131 0.473326 AAGATCATCAGGCCTGGAGC 59.527 55.000 32.23 23.78 42.60 4.70
131 132 2.092538 ACAAAGATCATCAGGCCTGGAG 60.093 50.000 32.23 23.53 0.00 3.86
132 133 1.918262 ACAAAGATCATCAGGCCTGGA 59.082 47.619 32.23 22.35 0.00 3.86
133 134 2.295885 GACAAAGATCATCAGGCCTGG 58.704 52.381 32.23 17.56 0.00 4.45
134 135 2.995283 TGACAAAGATCATCAGGCCTG 58.005 47.619 27.87 27.87 0.00 4.85
135 136 3.947612 ATGACAAAGATCATCAGGCCT 57.052 42.857 0.00 0.00 33.99 5.19
136 137 6.040166 ACAAATATGACAAAGATCATCAGGCC 59.960 38.462 0.00 0.00 39.97 5.19
137 138 6.916387 CACAAATATGACAAAGATCATCAGGC 59.084 38.462 0.00 0.00 39.97 4.85
138 139 8.217131 TCACAAATATGACAAAGATCATCAGG 57.783 34.615 0.00 0.00 39.97 3.86
142 143 9.345517 CGTTTTCACAAATATGACAAAGATCAT 57.654 29.630 0.00 0.00 42.13 2.45
143 144 8.563732 TCGTTTTCACAAATATGACAAAGATCA 58.436 29.630 0.00 0.00 26.81 2.92
144 145 8.948853 TCGTTTTCACAAATATGACAAAGATC 57.051 30.769 0.00 0.00 26.81 2.75
145 146 8.567948 ACTCGTTTTCACAAATATGACAAAGAT 58.432 29.630 0.00 0.00 30.12 2.40
146 147 7.855409 CACTCGTTTTCACAAATATGACAAAGA 59.145 33.333 0.00 0.00 29.88 2.52
147 148 7.643764 ACACTCGTTTTCACAAATATGACAAAG 59.356 33.333 0.00 0.00 0.00 2.77
148 149 7.476667 ACACTCGTTTTCACAAATATGACAAA 58.523 30.769 0.00 0.00 0.00 2.83
149 150 7.022055 ACACTCGTTTTCACAAATATGACAA 57.978 32.000 0.00 0.00 0.00 3.18
150 151 6.612247 ACACTCGTTTTCACAAATATGACA 57.388 33.333 0.00 0.00 0.00 3.58
151 152 8.065407 TGTTACACTCGTTTTCACAAATATGAC 58.935 33.333 0.00 0.00 0.00 3.06
152 153 8.144155 TGTTACACTCGTTTTCACAAATATGA 57.856 30.769 0.00 0.00 0.00 2.15
153 154 8.775220 TTGTTACACTCGTTTTCACAAATATG 57.225 30.769 0.00 0.00 0.00 1.78
156 157 9.959749 AATATTGTTACACTCGTTTTCACAAAT 57.040 25.926 0.00 0.00 0.00 2.32
157 158 9.790389 AAATATTGTTACACTCGTTTTCACAAA 57.210 25.926 0.00 0.00 0.00 2.83
158 159 9.440784 GAAATATTGTTACACTCGTTTTCACAA 57.559 29.630 0.00 0.00 0.00 3.33
159 160 8.832521 AGAAATATTGTTACACTCGTTTTCACA 58.167 29.630 0.00 0.00 0.00 3.58
160 161 9.659830 AAGAAATATTGTTACACTCGTTTTCAC 57.340 29.630 0.00 0.00 0.00 3.18
184 185 9.931210 GGGTGAAACGAGATTGTATTAATTAAG 57.069 33.333 3.94 0.00 38.12 1.85
185 186 8.605746 CGGGTGAAACGAGATTGTATTAATTAA 58.394 33.333 0.00 0.00 38.12 1.40
186 187 7.254522 GCGGGTGAAACGAGATTGTATTAATTA 60.255 37.037 0.00 0.00 38.12 1.40
187 188 6.457799 GCGGGTGAAACGAGATTGTATTAATT 60.458 38.462 0.00 0.00 38.12 1.40
188 189 5.007332 GCGGGTGAAACGAGATTGTATTAAT 59.993 40.000 0.00 0.00 38.12 1.40
189 190 4.330620 GCGGGTGAAACGAGATTGTATTAA 59.669 41.667 0.00 0.00 38.12 1.40
190 191 3.866910 GCGGGTGAAACGAGATTGTATTA 59.133 43.478 0.00 0.00 38.12 0.98
191 192 2.676342 GCGGGTGAAACGAGATTGTATT 59.324 45.455 0.00 0.00 38.12 1.89
192 193 2.277084 GCGGGTGAAACGAGATTGTAT 58.723 47.619 0.00 0.00 38.12 2.29
193 194 1.001068 TGCGGGTGAAACGAGATTGTA 59.999 47.619 0.00 0.00 38.12 2.41
194 195 0.250124 TGCGGGTGAAACGAGATTGT 60.250 50.000 0.00 0.00 38.12 2.71
195 196 0.871722 TTGCGGGTGAAACGAGATTG 59.128 50.000 0.00 0.00 38.12 2.67
196 197 1.600023 TTTGCGGGTGAAACGAGATT 58.400 45.000 0.00 0.00 38.12 2.40
197 198 1.600023 TTTTGCGGGTGAAACGAGAT 58.400 45.000 0.00 0.00 38.12 2.75
198 199 1.380524 TTTTTGCGGGTGAAACGAGA 58.619 45.000 0.00 0.00 38.12 4.04
199 200 3.928343 TTTTTGCGGGTGAAACGAG 57.072 47.368 0.00 0.00 38.12 4.18
259 262 7.318893 TGGCAACATTCATCAAATCGAAATTA 58.681 30.769 0.00 0.00 46.17 1.40
282 285 4.898829 TTCGACTGGCAAATATCAATGG 57.101 40.909 0.00 0.00 0.00 3.16
306 309 2.069776 CCCCATCTGCCATATCGGT 58.930 57.895 0.00 0.00 36.97 4.69
346 349 4.695455 CCGGTTATCTGTGATTGTTCAACT 59.305 41.667 0.00 0.00 32.48 3.16
360 368 2.224305 GCTAACCATCTGCCGGTTATCT 60.224 50.000 1.90 0.00 45.57 1.98
384 392 4.184649 TGGCTGGACTATGAGTCTATGA 57.815 45.455 6.58 0.00 44.46 2.15
385 393 4.771577 AGATGGCTGGACTATGAGTCTATG 59.228 45.833 6.58 0.00 44.46 2.23
386 394 5.009436 AGATGGCTGGACTATGAGTCTAT 57.991 43.478 6.58 0.00 44.46 1.98
387 395 4.105537 AGAGATGGCTGGACTATGAGTCTA 59.894 45.833 6.58 0.00 44.46 2.59
388 396 3.117169 AGAGATGGCTGGACTATGAGTCT 60.117 47.826 6.58 0.00 44.46 3.24
389 397 3.230134 AGAGATGGCTGGACTATGAGTC 58.770 50.000 0.00 0.00 44.32 3.36
390 398 3.326946 AGAGATGGCTGGACTATGAGT 57.673 47.619 0.00 0.00 0.00 3.41
391 399 3.896888 AGAAGAGATGGCTGGACTATGAG 59.103 47.826 0.00 0.00 0.00 2.90
583 601 4.264253 TCCATCTTTTAGTGCATGTCCTG 58.736 43.478 0.00 0.00 0.00 3.86
687 705 4.130857 TGATGCGTGTAACCAAGAAGAAA 58.869 39.130 0.00 0.00 0.00 2.52
714 732 8.895737 TCATCACACGTATAACTATAGTGTTCA 58.104 33.333 6.06 0.00 43.21 3.18
864 924 2.193536 AGCGAGGCGGTTGCTTTTT 61.194 52.632 0.00 0.00 44.38 1.94
891 956 4.830765 GCTGGCGCGGTACCATCA 62.831 66.667 13.54 3.17 36.36 3.07
892 957 2.709125 TATGCTGGCGCGGTACCATC 62.709 60.000 13.54 2.90 39.65 3.51
910 975 5.072600 AGGGGAAGCATATATTTTCGTGGTA 59.927 40.000 0.00 0.00 0.00 3.25
942 1012 2.435586 AGCACGCACTGATGGAGC 60.436 61.111 0.00 0.00 0.00 4.70
1088 1158 4.125695 AAGCTACGGCCGTCGACC 62.126 66.667 38.01 20.73 42.43 4.79
1089 1159 2.539263 AAGAAGCTACGGCCGTCGAC 62.539 60.000 38.01 24.76 42.43 4.20
1090 1160 2.262471 GAAGAAGCTACGGCCGTCGA 62.262 60.000 38.01 18.62 42.43 4.20
1091 1161 1.872679 GAAGAAGCTACGGCCGTCG 60.873 63.158 38.01 30.55 45.88 5.12
1092 1162 0.525882 GAGAAGAAGCTACGGCCGTC 60.526 60.000 38.01 22.46 39.73 4.79
1093 1163 1.248785 TGAGAAGAAGCTACGGCCGT 61.249 55.000 36.01 36.01 39.73 5.68
1227 1297 4.807039 GTATGCGTCCACGGCGGT 62.807 66.667 13.24 0.00 40.23 5.68
1241 1311 3.192466 GCCGACGGTGTAATTCTTGTAT 58.808 45.455 16.73 0.00 0.00 2.29
1362 1432 9.404456 TGCAGCTAGAGAATGCAACTGTAAGTA 62.404 40.741 9.14 0.00 45.52 2.24
1363 1433 8.689626 TGCAGCTAGAGAATGCAACTGTAAGT 62.690 42.308 9.14 0.00 46.31 2.24
1364 1434 4.033817 GCAGCTAGAGAATGCAACTGTAAG 59.966 45.833 0.00 0.00 39.75 2.34
1365 1435 3.935203 GCAGCTAGAGAATGCAACTGTAA 59.065 43.478 0.00 0.00 39.75 2.41
1406 1476 1.647346 TGGACGGATGCAACGTAATC 58.353 50.000 17.99 11.85 45.68 1.75
1415 1485 1.079503 GACTGAACTTGGACGGATGC 58.920 55.000 0.00 0.00 0.00 3.91
1419 1489 0.034059 AGCTGACTGAACTTGGACGG 59.966 55.000 0.00 0.00 0.00 4.79
1435 1544 0.607620 GCAGAGAGGTCTCACAAGCT 59.392 55.000 9.64 0.00 45.21 3.74
1488 1609 0.670546 TGGAGAAACGTAGCTGCTGC 60.671 55.000 13.43 10.46 40.05 5.25
1489 1610 2.015736 ATGGAGAAACGTAGCTGCTG 57.984 50.000 13.43 0.00 0.00 4.41
1567 1691 2.741211 GACAAAGCGACCGGGGAC 60.741 66.667 6.32 0.00 0.00 4.46
1572 1696 0.165944 GGTGATTGACAAAGCGACCG 59.834 55.000 0.00 0.00 0.00 4.79
1749 1946 2.014857 TCGTAGTCGCAGCTCTTGTAT 58.985 47.619 0.00 0.00 36.96 2.29
1790 1987 2.180769 CGGCAGACCAATCGACGA 59.819 61.111 0.00 0.00 33.46 4.20
1884 2081 3.031964 CTCGCCGTCGTAGTTCCGT 62.032 63.158 0.00 0.00 36.96 4.69
1885 2082 2.277120 CTCGCCGTCGTAGTTCCG 60.277 66.667 0.00 0.00 36.96 4.30
2081 2278 0.248661 CGTCTCGTCATCGGAAGCAT 60.249 55.000 0.00 0.00 37.69 3.79
2144 2341 2.819595 CCACGATCAGGCCAACCG 60.820 66.667 5.01 5.32 42.76 4.44
2280 2480 9.752228 ATGTGCCCATGTGAATTTATATACATA 57.248 29.630 0.00 0.00 32.86 2.29
2286 2486 6.489700 CAGGTATGTGCCCATGTGAATTTATA 59.510 38.462 0.00 0.00 32.29 0.98
2287 2487 5.302568 CAGGTATGTGCCCATGTGAATTTAT 59.697 40.000 0.00 0.00 32.29 1.40
2288 2488 4.644234 CAGGTATGTGCCCATGTGAATTTA 59.356 41.667 0.00 0.00 32.29 1.40
2295 2495 0.107703 CGACAGGTATGTGCCCATGT 60.108 55.000 0.00 0.00 40.68 3.21
2298 2498 1.897423 CTCGACAGGTATGTGCCCA 59.103 57.895 0.00 0.00 40.68 5.36
2301 2501 1.878522 CGGCTCGACAGGTATGTGC 60.879 63.158 0.00 0.00 40.68 4.57
2303 2503 1.511305 CACGGCTCGACAGGTATGT 59.489 57.895 1.50 0.00 44.31 2.29
2305 2505 2.494918 GCACGGCTCGACAGGTAT 59.505 61.111 1.50 0.00 0.00 2.73
2306 2506 3.755628 GGCACGGCTCGACAGGTA 61.756 66.667 1.50 0.00 0.00 3.08
2318 2518 4.473520 AATCGGGGAGCTGGCACG 62.474 66.667 0.00 0.00 0.00 5.34
2320 2520 4.802051 GCAATCGGGGAGCTGGCA 62.802 66.667 0.00 0.00 0.00 4.92
2335 2535 4.794439 CACGTGGATCGCGAGGCA 62.794 66.667 16.66 0.00 44.19 4.75
2341 2541 1.202440 TGTTATACCCACGTGGATCGC 60.202 52.381 36.07 19.08 44.19 4.58
2351 2551 5.549347 TGCTCTTAAAACGTGTTATACCCA 58.451 37.500 0.00 0.00 0.00 4.51
2352 2552 6.457799 CCATGCTCTTAAAACGTGTTATACCC 60.458 42.308 0.00 0.00 0.00 3.69
2353 2553 6.093082 ACCATGCTCTTAAAACGTGTTATACC 59.907 38.462 0.00 0.00 0.00 2.73
2354 2554 7.068692 ACCATGCTCTTAAAACGTGTTATAC 57.931 36.000 0.00 0.00 0.00 1.47
2355 2555 7.675962 AACCATGCTCTTAAAACGTGTTATA 57.324 32.000 0.00 0.00 0.00 0.98
2356 2556 6.569179 AACCATGCTCTTAAAACGTGTTAT 57.431 33.333 0.00 0.00 0.00 1.89
2357 2557 7.493743 TTAACCATGCTCTTAAAACGTGTTA 57.506 32.000 0.00 0.00 0.00 2.41
2358 2558 4.911514 AACCATGCTCTTAAAACGTGTT 57.088 36.364 0.00 0.00 0.00 3.32
2359 2559 6.569179 ATTAACCATGCTCTTAAAACGTGT 57.431 33.333 0.00 0.00 0.00 4.49
2360 2560 7.748847 ACTATTAACCATGCTCTTAAAACGTG 58.251 34.615 0.00 0.00 0.00 4.49
2361 2561 7.916914 ACTATTAACCATGCTCTTAAAACGT 57.083 32.000 0.00 0.00 0.00 3.99
2365 2565 9.720769 GGCTATACTATTAACCATGCTCTTAAA 57.279 33.333 0.00 0.00 0.00 1.52
2366 2566 8.033038 CGGCTATACTATTAACCATGCTCTTAA 58.967 37.037 0.00 0.00 0.00 1.85
2367 2567 7.363530 CCGGCTATACTATTAACCATGCTCTTA 60.364 40.741 0.00 0.00 0.00 2.10
2368 2568 6.398918 CGGCTATACTATTAACCATGCTCTT 58.601 40.000 0.00 0.00 0.00 2.85
2369 2569 5.105310 CCGGCTATACTATTAACCATGCTCT 60.105 44.000 0.00 0.00 0.00 4.09
2370 2570 5.109903 CCGGCTATACTATTAACCATGCTC 58.890 45.833 0.00 0.00 0.00 4.26
2371 2571 4.623171 GCCGGCTATACTATTAACCATGCT 60.623 45.833 22.15 0.00 0.00 3.79
2372 2572 3.621715 GCCGGCTATACTATTAACCATGC 59.378 47.826 22.15 0.00 0.00 4.06
2373 2573 4.870426 CAGCCGGCTATACTATTAACCATG 59.130 45.833 32.30 7.82 0.00 3.66
2374 2574 4.623171 GCAGCCGGCTATACTATTAACCAT 60.623 45.833 32.30 0.00 40.25 3.55
2375 2575 3.306502 GCAGCCGGCTATACTATTAACCA 60.307 47.826 32.30 0.00 40.25 3.67
2376 2576 3.259902 GCAGCCGGCTATACTATTAACC 58.740 50.000 32.30 1.84 40.25 2.85
2390 2590 0.251354 ATCATATAGCCAGCAGCCGG 59.749 55.000 0.00 0.00 45.47 6.13
2391 2591 1.338484 ACATCATATAGCCAGCAGCCG 60.338 52.381 0.00 0.00 45.47 5.52
2392 2592 2.486472 ACATCATATAGCCAGCAGCC 57.514 50.000 0.00 0.00 45.47 4.85
2393 2593 2.095364 GCAACATCATATAGCCAGCAGC 60.095 50.000 0.00 0.00 44.25 5.25
2394 2594 2.486982 GGCAACATCATATAGCCAGCAG 59.513 50.000 0.00 0.00 44.59 4.24
2395 2595 2.507484 GGCAACATCATATAGCCAGCA 58.493 47.619 0.00 0.00 44.59 4.41
2410 2610 6.401394 TGATAGCTCTATATGACATGGCAAC 58.599 40.000 4.70 0.00 0.00 4.17
2411 2611 6.212187 ACTGATAGCTCTATATGACATGGCAA 59.788 38.462 4.70 0.00 0.00 4.52
2412 2612 5.718607 ACTGATAGCTCTATATGACATGGCA 59.281 40.000 2.18 2.18 0.00 4.92
2413 2613 6.219417 ACTGATAGCTCTATATGACATGGC 57.781 41.667 0.00 0.00 0.00 4.40
2414 2614 7.609960 ACAACTGATAGCTCTATATGACATGG 58.390 38.462 0.00 0.00 0.00 3.66
2415 2615 9.786105 CTACAACTGATAGCTCTATATGACATG 57.214 37.037 0.00 0.00 0.00 3.21
2416 2616 8.465999 GCTACAACTGATAGCTCTATATGACAT 58.534 37.037 0.00 0.00 41.59 3.06
2417 2617 7.094162 GGCTACAACTGATAGCTCTATATGACA 60.094 40.741 0.00 0.00 43.83 3.58
2418 2618 7.094162 TGGCTACAACTGATAGCTCTATATGAC 60.094 40.741 0.00 0.00 43.83 3.06
2419 2619 6.948309 TGGCTACAACTGATAGCTCTATATGA 59.052 38.462 0.00 0.00 43.83 2.15
2420 2620 7.032580 GTGGCTACAACTGATAGCTCTATATG 58.967 42.308 0.00 0.00 43.83 1.78
2421 2621 6.951198 AGTGGCTACAACTGATAGCTCTATAT 59.049 38.462 2.02 0.00 43.83 0.86
2422 2622 6.307776 AGTGGCTACAACTGATAGCTCTATA 58.692 40.000 2.02 0.00 43.83 1.31
2423 2623 5.144100 AGTGGCTACAACTGATAGCTCTAT 58.856 41.667 2.02 0.00 43.83 1.98
2424 2624 4.537751 AGTGGCTACAACTGATAGCTCTA 58.462 43.478 2.02 0.00 43.83 2.43
2425 2625 3.370104 AGTGGCTACAACTGATAGCTCT 58.630 45.455 2.02 0.00 43.83 4.09
2426 2626 3.131223 TGAGTGGCTACAACTGATAGCTC 59.869 47.826 2.02 0.00 43.83 4.09
2427 2627 3.099905 TGAGTGGCTACAACTGATAGCT 58.900 45.455 2.02 0.00 43.83 3.32
2428 2628 3.526931 TGAGTGGCTACAACTGATAGC 57.473 47.619 2.02 0.00 43.66 2.97
2429 2629 6.149129 TGTATGAGTGGCTACAACTGATAG 57.851 41.667 2.02 0.00 0.00 2.08
2430 2630 6.538945 TTGTATGAGTGGCTACAACTGATA 57.461 37.500 2.02 0.00 33.96 2.15
2431 2631 5.420725 TTGTATGAGTGGCTACAACTGAT 57.579 39.130 2.02 0.00 33.96 2.90
2432 2632 4.882842 TTGTATGAGTGGCTACAACTGA 57.117 40.909 2.02 0.00 33.96 3.41
2433 2633 6.258727 CCTTATTGTATGAGTGGCTACAACTG 59.741 42.308 2.02 0.00 39.80 3.16
2434 2634 6.070194 ACCTTATTGTATGAGTGGCTACAACT 60.070 38.462 2.02 0.00 39.80 3.16
2435 2635 6.113411 ACCTTATTGTATGAGTGGCTACAAC 58.887 40.000 2.02 0.00 39.80 3.32
2436 2636 6.308015 ACCTTATTGTATGAGTGGCTACAA 57.692 37.500 2.02 0.00 40.87 2.41
2437 2637 5.950544 ACCTTATTGTATGAGTGGCTACA 57.049 39.130 2.02 0.00 0.00 2.74
2438 2638 5.527582 CCAACCTTATTGTATGAGTGGCTAC 59.472 44.000 0.00 0.00 0.00 3.58
2439 2639 5.680619 CCAACCTTATTGTATGAGTGGCTA 58.319 41.667 0.00 0.00 0.00 3.93
2440 2640 4.526970 CCAACCTTATTGTATGAGTGGCT 58.473 43.478 0.00 0.00 0.00 4.75
2441 2641 3.066760 GCCAACCTTATTGTATGAGTGGC 59.933 47.826 0.00 0.00 41.93 5.01
2442 2642 4.526970 AGCCAACCTTATTGTATGAGTGG 58.473 43.478 0.00 0.00 0.00 4.00
2443 2643 8.902540 TTATAGCCAACCTTATTGTATGAGTG 57.097 34.615 0.00 0.00 0.00 3.51
2444 2644 8.934697 TCTTATAGCCAACCTTATTGTATGAGT 58.065 33.333 0.00 0.00 0.00 3.41
2445 2645 9.778741 TTCTTATAGCCAACCTTATTGTATGAG 57.221 33.333 0.00 0.00 0.00 2.90
2509 2709 8.993424 AGATTCCTAGGCCGATACAATAAATAT 58.007 33.333 2.96 0.00 0.00 1.28
2510 2710 8.258007 CAGATTCCTAGGCCGATACAATAAATA 58.742 37.037 2.96 0.00 0.00 1.40
2511 2711 7.106239 CAGATTCCTAGGCCGATACAATAAAT 58.894 38.462 2.96 0.00 0.00 1.40
2512 2712 6.464222 CAGATTCCTAGGCCGATACAATAAA 58.536 40.000 2.96 0.00 0.00 1.40
2513 2713 5.568825 GCAGATTCCTAGGCCGATACAATAA 60.569 44.000 2.96 0.00 0.00 1.40
2514 2714 4.081642 GCAGATTCCTAGGCCGATACAATA 60.082 45.833 2.96 0.00 0.00 1.90
2515 2715 3.307059 GCAGATTCCTAGGCCGATACAAT 60.307 47.826 2.96 0.00 0.00 2.71
2516 2716 2.037251 GCAGATTCCTAGGCCGATACAA 59.963 50.000 2.96 0.00 0.00 2.41
2517 2717 1.618837 GCAGATTCCTAGGCCGATACA 59.381 52.381 2.96 0.00 0.00 2.29
2518 2718 1.618837 TGCAGATTCCTAGGCCGATAC 59.381 52.381 2.96 0.00 0.00 2.24
2519 2719 2.009681 TGCAGATTCCTAGGCCGATA 57.990 50.000 2.96 0.00 0.00 2.92
2520 2720 1.356124 ATGCAGATTCCTAGGCCGAT 58.644 50.000 2.96 0.00 0.00 4.18
2521 2721 2.009681 TATGCAGATTCCTAGGCCGA 57.990 50.000 2.96 0.00 0.00 5.54
2522 2722 3.739519 GCTATATGCAGATTCCTAGGCCG 60.740 52.174 2.96 0.00 42.31 6.13
2523 2723 3.454082 AGCTATATGCAGATTCCTAGGCC 59.546 47.826 2.96 0.00 45.94 5.19
2524 2724 4.751767 AGCTATATGCAGATTCCTAGGC 57.248 45.455 2.96 0.00 45.94 3.93
2525 2725 5.221422 GGCTAGCTATATGCAGATTCCTAGG 60.221 48.000 15.72 0.82 45.94 3.02
2526 2726 5.598005 AGGCTAGCTATATGCAGATTCCTAG 59.402 44.000 15.72 17.09 45.94 3.02
2527 2727 5.523588 AGGCTAGCTATATGCAGATTCCTA 58.476 41.667 15.72 0.04 45.94 2.94
2528 2728 4.360889 AGGCTAGCTATATGCAGATTCCT 58.639 43.478 15.72 0.00 45.94 3.36
2529 2729 4.405358 AGAGGCTAGCTATATGCAGATTCC 59.595 45.833 15.72 0.00 45.94 3.01
2530 2730 5.596836 AGAGGCTAGCTATATGCAGATTC 57.403 43.478 15.72 0.00 45.94 2.52
2531 2731 5.732633 CAAGAGGCTAGCTATATGCAGATT 58.267 41.667 15.72 0.00 45.94 2.40
2532 2732 4.382901 GCAAGAGGCTAGCTATATGCAGAT 60.383 45.833 22.21 0.00 41.47 2.90
2533 2733 3.056250 GCAAGAGGCTAGCTATATGCAGA 60.056 47.826 22.21 0.00 41.47 4.26
2534 2734 3.260740 GCAAGAGGCTAGCTATATGCAG 58.739 50.000 22.21 6.81 41.47 4.41
2535 2735 2.634453 TGCAAGAGGCTAGCTATATGCA 59.366 45.455 24.41 24.41 43.87 3.96
2536 2736 3.325293 TGCAAGAGGCTAGCTATATGC 57.675 47.619 15.72 19.15 45.15 3.14
2537 2737 5.082251 TCATGCAAGAGGCTAGCTATATG 57.918 43.478 15.72 10.29 45.15 1.78
2538 2738 5.022122 TCTCATGCAAGAGGCTAGCTATAT 58.978 41.667 18.26 0.00 45.15 0.86
2539 2739 4.411013 TCTCATGCAAGAGGCTAGCTATA 58.589 43.478 18.26 0.00 45.15 1.31
2540 2740 3.237746 TCTCATGCAAGAGGCTAGCTAT 58.762 45.455 18.26 3.39 45.15 2.97
2541 2741 2.627221 CTCTCATGCAAGAGGCTAGCTA 59.373 50.000 18.26 0.00 45.15 3.32
2542 2742 1.413445 CTCTCATGCAAGAGGCTAGCT 59.587 52.381 18.26 0.00 45.15 3.32
2543 2743 1.868469 CTCTCATGCAAGAGGCTAGC 58.132 55.000 18.26 6.04 45.15 3.42
2544 2744 1.868469 GCTCTCATGCAAGAGGCTAG 58.132 55.000 18.26 9.95 42.58 3.42
2546 2746 4.959399 GCTCTCATGCAAGAGGCT 57.041 55.556 18.26 0.00 42.58 4.58
2548 2748 0.747283 GTGGGCTCTCATGCAAGAGG 60.747 60.000 18.26 10.40 42.58 3.69
2549 2749 0.252479 AGTGGGCTCTCATGCAAGAG 59.748 55.000 12.75 12.75 44.69 2.85
2550 2750 0.251354 GAGTGGGCTCTCATGCAAGA 59.749 55.000 0.00 0.00 38.66 3.02
2551 2751 0.747283 GGAGTGGGCTCTCATGCAAG 60.747 60.000 0.00 0.00 41.38 4.01
2552 2752 1.203441 AGGAGTGGGCTCTCATGCAA 61.203 55.000 0.00 0.00 41.38 4.08
2553 2753 1.614525 AGGAGTGGGCTCTCATGCA 60.615 57.895 10.99 0.00 41.38 3.96
2554 2754 1.145819 GAGGAGTGGGCTCTCATGC 59.854 63.158 10.99 0.00 41.38 4.06
2555 2755 0.752054 GAGAGGAGTGGGCTCTCATG 59.248 60.000 0.00 0.00 42.14 3.07
2556 2756 0.337773 TGAGAGGAGTGGGCTCTCAT 59.662 55.000 0.00 5.19 45.73 2.90
2557 2757 4.774820 GAGAGGAGTGGGCTCTCA 57.225 61.111 0.00 0.00 42.14 3.27
2558 2758 0.324275 AGTGAGAGGAGTGGGCTCTC 60.324 60.000 0.00 0.00 42.69 3.20
2559 2759 0.116143 AAGTGAGAGGAGTGGGCTCT 59.884 55.000 0.00 0.00 41.38 4.09
2560 2760 0.980423 AAAGTGAGAGGAGTGGGCTC 59.020 55.000 0.00 0.00 40.93 4.70
2561 2761 1.439543 AAAAGTGAGAGGAGTGGGCT 58.560 50.000 0.00 0.00 0.00 5.19
2562 2762 2.155279 GAAAAAGTGAGAGGAGTGGGC 58.845 52.381 0.00 0.00 0.00 5.36
2563 2763 3.492102 TGAAAAAGTGAGAGGAGTGGG 57.508 47.619 0.00 0.00 0.00 4.61
2564 2764 4.392940 ACATGAAAAAGTGAGAGGAGTGG 58.607 43.478 0.00 0.00 0.00 4.00
2565 2765 5.303971 AGACATGAAAAAGTGAGAGGAGTG 58.696 41.667 0.00 0.00 0.00 3.51
2566 2766 5.306678 AGAGACATGAAAAAGTGAGAGGAGT 59.693 40.000 0.00 0.00 0.00 3.85
2567 2767 5.792741 AGAGACATGAAAAAGTGAGAGGAG 58.207 41.667 0.00 0.00 0.00 3.69
2568 2768 5.815233 AGAGACATGAAAAAGTGAGAGGA 57.185 39.130 0.00 0.00 0.00 3.71
2569 2769 6.072783 GGAAAGAGACATGAAAAAGTGAGAGG 60.073 42.308 0.00 0.00 0.00 3.69
2570 2770 6.709846 AGGAAAGAGACATGAAAAAGTGAGAG 59.290 38.462 0.00 0.00 0.00 3.20
2571 2771 6.595682 AGGAAAGAGACATGAAAAAGTGAGA 58.404 36.000 0.00 0.00 0.00 3.27
2572 2772 6.072783 GGAGGAAAGAGACATGAAAAAGTGAG 60.073 42.308 0.00 0.00 0.00 3.51
2573 2773 5.765182 GGAGGAAAGAGACATGAAAAAGTGA 59.235 40.000 0.00 0.00 0.00 3.41
2574 2774 5.532406 TGGAGGAAAGAGACATGAAAAAGTG 59.468 40.000 0.00 0.00 0.00 3.16
2575 2775 5.532779 GTGGAGGAAAGAGACATGAAAAAGT 59.467 40.000 0.00 0.00 0.00 2.66
2576 2776 5.532406 TGTGGAGGAAAGAGACATGAAAAAG 59.468 40.000 0.00 0.00 0.00 2.27
2577 2777 5.445069 TGTGGAGGAAAGAGACATGAAAAA 58.555 37.500 0.00 0.00 0.00 1.94
2578 2778 5.047566 TGTGGAGGAAAGAGACATGAAAA 57.952 39.130 0.00 0.00 0.00 2.29
2579 2779 4.705110 TGTGGAGGAAAGAGACATGAAA 57.295 40.909 0.00 0.00 0.00 2.69
2580 2780 4.621510 CGATGTGGAGGAAAGAGACATGAA 60.622 45.833 0.00 0.00 0.00 2.57
2581 2781 3.118992 CGATGTGGAGGAAAGAGACATGA 60.119 47.826 0.00 0.00 0.00 3.07
2582 2782 3.193263 CGATGTGGAGGAAAGAGACATG 58.807 50.000 0.00 0.00 0.00 3.21
2583 2783 2.169352 CCGATGTGGAGGAAAGAGACAT 59.831 50.000 0.00 0.00 42.00 3.06
2584 2784 1.550524 CCGATGTGGAGGAAAGAGACA 59.449 52.381 0.00 0.00 42.00 3.41
2585 2785 1.740718 GCCGATGTGGAGGAAAGAGAC 60.741 57.143 0.00 0.00 42.00 3.36
2586 2786 0.537188 GCCGATGTGGAGGAAAGAGA 59.463 55.000 0.00 0.00 42.00 3.10
2587 2787 0.250234 TGCCGATGTGGAGGAAAGAG 59.750 55.000 0.00 0.00 42.00 2.85
2588 2788 0.690192 TTGCCGATGTGGAGGAAAGA 59.310 50.000 0.00 0.00 42.00 2.52
2589 2789 1.533625 TTTGCCGATGTGGAGGAAAG 58.466 50.000 0.00 0.00 42.00 2.62
2590 2790 1.988293 TTTTGCCGATGTGGAGGAAA 58.012 45.000 0.00 0.00 42.00 3.13
2591 2791 2.214376 ATTTTGCCGATGTGGAGGAA 57.786 45.000 0.00 0.00 42.00 3.36
2592 2792 1.818060 CAATTTTGCCGATGTGGAGGA 59.182 47.619 0.00 0.00 42.00 3.71
2593 2793 2.282701 CAATTTTGCCGATGTGGAGG 57.717 50.000 0.00 0.00 42.00 4.30
2605 2805 2.270047 CCCGCTTACATGGCAATTTTG 58.730 47.619 0.00 0.00 0.00 2.44
2606 2806 1.405391 GCCCGCTTACATGGCAATTTT 60.405 47.619 0.00 0.00 44.70 1.82
2607 2807 0.175531 GCCCGCTTACATGGCAATTT 59.824 50.000 0.00 0.00 44.70 1.82
2608 2808 1.815866 GCCCGCTTACATGGCAATT 59.184 52.632 0.00 0.00 44.70 2.32
2609 2809 3.525221 GCCCGCTTACATGGCAAT 58.475 55.556 0.00 0.00 44.70 3.56
2612 2812 2.076863 CTTATAGCCCGCTTACATGGC 58.923 52.381 0.00 0.00 45.70 4.40
2613 2813 2.076863 GCTTATAGCCCGCTTACATGG 58.923 52.381 0.00 0.00 34.48 3.66
2665 2865 1.363885 ATTTAAAGCCGGACGCGTCC 61.364 55.000 41.75 41.75 46.18 4.79
2705 2905 3.384146 TGTGTGATGTGCAAACTTGGATT 59.616 39.130 0.00 0.00 35.64 3.01
2728 2931 4.389374 CCTGTTGAGACTGTTATGTGGTT 58.611 43.478 0.00 0.00 0.00 3.67
2767 2983 6.072112 ACTTGCGAACTATTTGATGTGTTT 57.928 33.333 0.00 0.00 0.00 2.83
2790 3009 5.311121 TGAGTTAGATTTGGTTGGGACCTAA 59.689 40.000 0.00 0.00 46.66 2.69
2866 3092 3.926616 ACAAGTATCCCAAGACTTCGTG 58.073 45.455 0.00 0.00 34.77 4.35
2983 3213 6.906157 AATTCCCGACTAATCCGACTAATA 57.094 37.500 0.00 0.00 0.00 0.98
2986 3216 6.684686 CATAAATTCCCGACTAATCCGACTA 58.315 40.000 0.00 0.00 0.00 2.59
3230 3460 4.823442 GGGACTTGCATGATATGTGAATCA 59.177 41.667 6.60 0.00 40.07 2.57
3241 3471 0.178767 CTCGGATGGGACTTGCATGA 59.821 55.000 6.60 0.00 0.00 3.07
3244 3474 2.989639 CCTCGGATGGGACTTGCA 59.010 61.111 0.00 0.00 0.00 4.08


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.