Multiple sequence alignment - TraesCS3B01G166000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G166000 chr3B 100.000 4620 0 0 1 4620 166286355 166281736 0.000000e+00 8532.0
1 TraesCS3B01G166000 chr3B 86.335 161 22 0 498 658 698231138 698230978 4.750000e-40 176.0
2 TraesCS3B01G166000 chr3D 93.793 3738 153 22 272 3991 114491598 114495274 0.000000e+00 5544.0
3 TraesCS3B01G166000 chr3D 80.395 760 106 18 1282 2014 114226702 114225959 5.260000e-149 538.0
4 TraesCS3B01G166000 chr3D 92.857 350 10 7 3975 4323 114498492 114498827 1.150000e-135 494.0
5 TraesCS3B01G166000 chr3D 84.868 304 32 3 972 1275 114229085 114228796 1.260000e-75 294.0
6 TraesCS3B01G166000 chr3A 95.751 1059 45 0 972 2030 110470986 110472044 0.000000e+00 1707.0
7 TraesCS3B01G166000 chr3A 94.934 533 21 5 3722 4253 110472685 110473212 0.000000e+00 830.0
8 TraesCS3B01G166000 chr3A 87.403 643 73 2 1863 2497 110073400 110072758 0.000000e+00 732.0
9 TraesCS3B01G166000 chr3A 98.123 373 6 1 3350 3722 110472044 110472415 0.000000e+00 649.0
10 TraesCS3B01G166000 chr3A 81.792 703 98 19 1052 1733 110131111 110130418 3.120000e-156 562.0
11 TraesCS3B01G166000 chr1B 93.464 306 17 3 4313 4617 625995192 625995495 7.050000e-123 451.0
12 TraesCS3B01G166000 chr4D 85.668 307 40 4 4315 4620 122248352 122248655 2.070000e-83 320.0
13 TraesCS3B01G166000 chr4D 90.000 150 15 0 4321 4470 96865741 96865890 1.310000e-45 195.0
14 TraesCS3B01G166000 chr7B 82.951 305 52 0 1820 2124 540046918 540047222 4.550000e-70 276.0
15 TraesCS3B01G166000 chr7B 80.656 305 59 0 1820 2124 540706929 540707233 2.150000e-58 237.0
16 TraesCS3B01G166000 chr7B 81.461 178 26 5 499 672 636307380 636307206 6.230000e-29 139.0
17 TraesCS3B01G166000 chr7B 85.507 69 9 1 301 368 622172101 622172033 2.310000e-08 71.3
18 TraesCS3B01G166000 chr7D 83.162 291 49 0 1820 2110 511222297 511222587 2.740000e-67 267.0
19 TraesCS3B01G166000 chr7D 81.967 305 55 0 1820 2124 511535619 511535923 4.590000e-65 259.0
20 TraesCS3B01G166000 chr7D 76.241 282 48 16 495 763 268680049 268680324 1.040000e-26 132.0
21 TraesCS3B01G166000 chr7D 80.473 169 30 3 1069 1236 511530340 511530506 4.850000e-25 126.0
22 TraesCS3B01G166000 chr7D 85.149 101 11 2 1141 1237 511534893 511534993 2.940000e-17 100.0
23 TraesCS3B01G166000 chr7A 82.877 292 48 2 1820 2110 583162422 583162712 1.270000e-65 261.0
24 TraesCS3B01G166000 chr7A 81.311 305 57 0 1820 2124 584038902 584039206 9.930000e-62 248.0
25 TraesCS3B01G166000 chr7A 83.529 170 26 2 1069 1237 584038079 584038247 1.720000e-34 158.0
26 TraesCS3B01G166000 chr2D 81.467 259 37 10 4322 4576 445702255 445702506 7.840000e-48 202.0
27 TraesCS3B01G166000 chr2D 86.806 144 18 1 492 634 595395097 595394954 4.780000e-35 159.0
28 TraesCS3B01G166000 chr2D 84.768 151 21 2 498 646 644282067 644282217 2.880000e-32 150.0
29 TraesCS3B01G166000 chr2D 91.111 45 3 1 414 458 70506880 70506837 4.990000e-05 60.2
30 TraesCS3B01G166000 chr6D 82.258 248 29 11 4330 4576 306595968 306595735 2.820000e-47 200.0
31 TraesCS3B01G166000 chr5D 79.927 274 44 10 4324 4593 433885490 433885756 1.700000e-44 191.0
32 TraesCS3B01G166000 chr5D 87.425 167 19 2 4324 4488 482256804 482256970 1.700000e-44 191.0
33 TraesCS3B01G166000 chr5D 86.517 89 10 2 283 369 219527707 219527619 3.800000e-16 97.1
34 TraesCS3B01G166000 chr5D 90.164 61 4 2 410 469 539958400 539958341 1.380000e-10 78.7
35 TraesCS3B01G166000 chr4B 79.286 280 43 10 495 763 570146608 570146883 1.020000e-41 182.0
36 TraesCS3B01G166000 chr4B 86.486 74 10 0 407 480 145521366 145521293 1.070000e-11 82.4
37 TraesCS3B01G166000 chr5A 79.771 262 40 9 4321 4576 52423012 52423266 1.320000e-40 178.0
38 TraesCS3B01G166000 chr1D 78.676 272 45 10 4324 4591 250955752 250955490 7.950000e-38 169.0
39 TraesCS3B01G166000 chr1D 84.615 169 24 2 505 672 379591529 379591696 2.860000e-37 167.0
40 TraesCS3B01G166000 chr1A 79.600 250 40 9 4321 4564 8722309 8722553 7.950000e-38 169.0
41 TraesCS3B01G166000 chr1A 87.805 82 10 0 1153 1234 279825067 279825148 3.800000e-16 97.1
42 TraesCS3B01G166000 chr2B 81.287 171 28 4 497 664 744826940 744826771 8.060000e-28 135.0
43 TraesCS3B01G166000 chr2B 82.895 76 9 4 305 377 345289428 345289354 1.070000e-06 65.8
44 TraesCS3B01G166000 chr6B 91.525 59 4 1 414 472 218655749 218655692 3.830000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G166000 chr3B 166281736 166286355 4619 True 8532 8532 100.000000 1 4620 1 chr3B.!!$R1 4619
1 TraesCS3B01G166000 chr3D 114491598 114498827 7229 False 3019 5544 93.325000 272 4323 2 chr3D.!!$F1 4051
2 TraesCS3B01G166000 chr3D 114225959 114229085 3126 True 416 538 82.631500 972 2014 2 chr3D.!!$R1 1042
3 TraesCS3B01G166000 chr3A 110470986 110473212 2226 False 1062 1707 96.269333 972 4253 3 chr3A.!!$F1 3281
4 TraesCS3B01G166000 chr3A 110072758 110073400 642 True 732 732 87.403000 1863 2497 1 chr3A.!!$R1 634
5 TraesCS3B01G166000 chr3A 110130418 110131111 693 True 562 562 81.792000 1052 1733 1 chr3A.!!$R2 681
6 TraesCS3B01G166000 chr7A 584038079 584039206 1127 False 203 248 82.420000 1069 2124 2 chr7A.!!$F2 1055

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
111 112 0.036732 ACAAGATCGTGCACATGGGT 59.963 50.0 18.64 3.87 0.00 4.51 F
348 349 0.184933 TCAGGTTCCTTGGTTGTGGG 59.815 55.0 0.00 0.00 0.00 4.61 F
376 377 0.257039 GCCATGTTGAGGGGAGATGT 59.743 55.0 0.00 0.00 0.00 3.06 F
577 578 0.320421 ACGCACACACATACACCTCC 60.320 55.0 0.00 0.00 0.00 4.30 F
851 858 0.611714 TCCTTCGGGCCAAGTTACTC 59.388 55.0 4.39 0.00 34.44 2.59 F
2400 4580 0.815213 GCACAGTTGAGCACCTCACA 60.815 55.0 0.00 0.00 40.46 3.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1788 3957 0.951040 CCGGCTTCCACTCAACAGAC 60.951 60.000 0.00 0.0 0.00 3.51 R
1848 4020 1.519719 GATCTTGCCGAGGAGCAGT 59.480 57.895 0.00 0.0 45.13 4.40 R
2203 4383 3.997021 CCAGACTGTTGTACCATCTCAAC 59.003 47.826 0.93 0.0 42.62 3.18 R
2568 4748 3.423206 GCTGAGAAAACTTGTTCAATGCG 59.577 43.478 0.00 0.0 0.00 4.73 R
2664 4844 0.112995 AGGGCAGCAGAAATGGTTGA 59.887 50.000 0.00 0.0 0.00 3.18 R
4208 9899 0.099613 CTCCGTCTGAGACACCGATG 59.900 60.000 13.67 0.0 44.42 3.84 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.709495 CCCTACTTTGAAATGATTGAATGAAAA 57.291 29.630 0.00 0.00 0.00 2.29
64 65 7.692088 AGATCAGCAAAATTAGAGAAATCACG 58.308 34.615 0.00 0.00 0.00 4.35
65 66 7.550551 AGATCAGCAAAATTAGAGAAATCACGA 59.449 33.333 0.00 0.00 0.00 4.35
66 67 7.065216 TCAGCAAAATTAGAGAAATCACGAG 57.935 36.000 0.00 0.00 0.00 4.18
67 68 6.650807 TCAGCAAAATTAGAGAAATCACGAGT 59.349 34.615 0.00 0.00 0.00 4.18
68 69 7.173218 TCAGCAAAATTAGAGAAATCACGAGTT 59.827 33.333 0.00 0.00 0.00 3.01
69 70 7.479916 CAGCAAAATTAGAGAAATCACGAGTTC 59.520 37.037 0.00 0.00 35.82 3.01
70 71 7.173218 AGCAAAATTAGAGAAATCACGAGTTCA 59.827 33.333 9.61 0.00 37.82 3.18
71 72 7.269297 GCAAAATTAGAGAAATCACGAGTTCAC 59.731 37.037 9.61 3.64 37.82 3.18
72 73 7.962964 AAATTAGAGAAATCACGAGTTCACA 57.037 32.000 9.61 0.00 37.82 3.58
73 74 7.962964 AATTAGAGAAATCACGAGTTCACAA 57.037 32.000 9.61 1.57 37.82 3.33
74 75 7.962964 ATTAGAGAAATCACGAGTTCACAAA 57.037 32.000 9.61 1.58 37.82 2.83
75 76 5.659048 AGAGAAATCACGAGTTCACAAAC 57.341 39.130 9.61 0.00 37.82 2.93
76 77 5.116180 AGAGAAATCACGAGTTCACAAACA 58.884 37.500 9.61 0.00 37.82 2.83
77 78 5.584649 AGAGAAATCACGAGTTCACAAACAA 59.415 36.000 9.61 0.00 37.82 2.83
78 79 5.810525 AGAAATCACGAGTTCACAAACAAG 58.189 37.500 9.61 0.00 37.82 3.16
79 80 5.584649 AGAAATCACGAGTTCACAAACAAGA 59.415 36.000 9.61 0.00 37.82 3.02
80 81 6.260936 AGAAATCACGAGTTCACAAACAAGAT 59.739 34.615 9.61 0.00 37.82 2.40
81 82 5.597813 ATCACGAGTTCACAAACAAGATC 57.402 39.130 0.00 0.00 37.88 2.75
82 83 3.489416 TCACGAGTTCACAAACAAGATCG 59.511 43.478 0.00 0.00 37.88 3.69
83 84 3.489416 CACGAGTTCACAAACAAGATCGA 59.511 43.478 0.00 0.00 37.88 3.59
84 85 3.489785 ACGAGTTCACAAACAAGATCGAC 59.510 43.478 0.00 0.00 37.88 4.20
85 86 3.420544 CGAGTTCACAAACAAGATCGACG 60.421 47.826 0.00 0.00 37.88 5.12
86 87 2.221055 AGTTCACAAACAAGATCGACGC 59.779 45.455 0.00 0.00 37.88 5.19
87 88 1.859383 TCACAAACAAGATCGACGCA 58.141 45.000 0.00 0.00 0.00 5.24
88 89 2.412870 TCACAAACAAGATCGACGCAT 58.587 42.857 0.00 0.00 0.00 4.73
89 90 2.805671 TCACAAACAAGATCGACGCATT 59.194 40.909 0.00 0.00 0.00 3.56
90 91 3.249799 TCACAAACAAGATCGACGCATTT 59.750 39.130 0.00 0.00 0.00 2.32
91 92 3.974401 CACAAACAAGATCGACGCATTTT 59.026 39.130 0.00 0.00 0.00 1.82
92 93 5.050023 TCACAAACAAGATCGACGCATTTTA 60.050 36.000 0.00 0.00 0.00 1.52
93 94 5.058008 CACAAACAAGATCGACGCATTTTAC 59.942 40.000 0.00 0.00 0.00 2.01
94 95 5.143660 CAAACAAGATCGACGCATTTTACA 58.856 37.500 0.00 0.00 0.00 2.41
95 96 5.351233 AACAAGATCGACGCATTTTACAA 57.649 34.783 0.00 0.00 0.00 2.41
96 97 4.957971 ACAAGATCGACGCATTTTACAAG 58.042 39.130 0.00 0.00 0.00 3.16
97 98 4.688879 ACAAGATCGACGCATTTTACAAGA 59.311 37.500 0.00 0.00 0.00 3.02
98 99 5.351465 ACAAGATCGACGCATTTTACAAGAT 59.649 36.000 0.00 0.00 0.00 2.40
99 100 5.643339 AGATCGACGCATTTTACAAGATC 57.357 39.130 0.00 0.00 34.98 2.75
100 101 3.899835 TCGACGCATTTTACAAGATCG 57.100 42.857 0.00 0.00 0.00 3.69
101 102 3.247442 TCGACGCATTTTACAAGATCGT 58.753 40.909 0.00 0.00 0.00 3.73
102 103 3.060230 TCGACGCATTTTACAAGATCGTG 59.940 43.478 7.13 7.13 0.00 4.35
103 104 3.091417 GACGCATTTTACAAGATCGTGC 58.909 45.455 8.68 0.00 0.00 5.34
104 105 2.482336 ACGCATTTTACAAGATCGTGCA 59.518 40.909 8.68 0.00 0.00 4.57
105 106 2.840176 CGCATTTTACAAGATCGTGCAC 59.160 45.455 6.82 6.82 0.00 4.57
106 107 3.666638 CGCATTTTACAAGATCGTGCACA 60.667 43.478 18.64 4.45 0.00 4.57
107 108 4.414852 GCATTTTACAAGATCGTGCACAT 58.585 39.130 18.64 9.52 0.00 3.21
108 109 4.263677 GCATTTTACAAGATCGTGCACATG 59.736 41.667 18.64 9.13 0.00 3.21
109 110 4.418013 TTTTACAAGATCGTGCACATGG 57.582 40.909 18.64 0.04 0.00 3.66
110 111 2.022764 TACAAGATCGTGCACATGGG 57.977 50.000 18.64 0.00 0.00 4.00
111 112 0.036732 ACAAGATCGTGCACATGGGT 59.963 50.000 18.64 3.87 0.00 4.51
112 113 1.277842 ACAAGATCGTGCACATGGGTA 59.722 47.619 18.64 0.00 0.00 3.69
113 114 2.290008 ACAAGATCGTGCACATGGGTAA 60.290 45.455 18.64 0.00 0.00 2.85
114 115 2.315925 AGATCGTGCACATGGGTAAG 57.684 50.000 18.64 0.00 0.00 2.34
115 116 1.555075 AGATCGTGCACATGGGTAAGT 59.445 47.619 18.64 0.00 0.00 2.24
116 117 1.933853 GATCGTGCACATGGGTAAGTC 59.066 52.381 18.64 0.00 0.00 3.01
117 118 0.389296 TCGTGCACATGGGTAAGTCG 60.389 55.000 18.64 0.00 0.00 4.18
118 119 0.389296 CGTGCACATGGGTAAGTCGA 60.389 55.000 18.64 0.00 0.00 4.20
119 120 1.359848 GTGCACATGGGTAAGTCGAG 58.640 55.000 13.17 0.00 0.00 4.04
120 121 1.067142 GTGCACATGGGTAAGTCGAGA 60.067 52.381 13.17 0.00 0.00 4.04
121 122 1.204704 TGCACATGGGTAAGTCGAGAG 59.795 52.381 0.00 0.00 0.00 3.20
122 123 1.204941 GCACATGGGTAAGTCGAGAGT 59.795 52.381 0.00 0.00 0.00 3.24
123 124 2.426024 GCACATGGGTAAGTCGAGAGTA 59.574 50.000 0.00 0.00 0.00 2.59
124 125 3.068307 GCACATGGGTAAGTCGAGAGTAT 59.932 47.826 0.00 0.00 0.00 2.12
125 126 4.441634 GCACATGGGTAAGTCGAGAGTATT 60.442 45.833 0.00 0.00 0.00 1.89
126 127 5.661458 CACATGGGTAAGTCGAGAGTATTT 58.339 41.667 0.00 0.00 0.00 1.40
127 128 6.106673 CACATGGGTAAGTCGAGAGTATTTT 58.893 40.000 0.00 0.00 0.00 1.82
128 129 6.036083 CACATGGGTAAGTCGAGAGTATTTTG 59.964 42.308 0.00 0.00 0.00 2.44
129 130 5.080969 TGGGTAAGTCGAGAGTATTTTGG 57.919 43.478 0.00 0.00 0.00 3.28
130 131 4.081309 TGGGTAAGTCGAGAGTATTTTGGG 60.081 45.833 0.00 0.00 0.00 4.12
131 132 4.081254 GGGTAAGTCGAGAGTATTTTGGGT 60.081 45.833 0.00 0.00 0.00 4.51
132 133 5.107824 GGTAAGTCGAGAGTATTTTGGGTC 58.892 45.833 0.00 0.00 0.00 4.46
133 134 3.505464 AGTCGAGAGTATTTTGGGTCG 57.495 47.619 0.00 0.00 0.00 4.79
134 135 3.087031 AGTCGAGAGTATTTTGGGTCGA 58.913 45.455 0.00 0.00 34.26 4.20
135 136 3.128938 AGTCGAGAGTATTTTGGGTCGAG 59.871 47.826 0.00 0.00 37.13 4.04
136 137 2.426024 TCGAGAGTATTTTGGGTCGAGG 59.574 50.000 0.00 0.00 32.92 4.63
137 138 2.165845 CGAGAGTATTTTGGGTCGAGGT 59.834 50.000 0.00 0.00 0.00 3.85
138 139 3.368116 CGAGAGTATTTTGGGTCGAGGTT 60.368 47.826 0.00 0.00 0.00 3.50
139 140 4.142315 CGAGAGTATTTTGGGTCGAGGTTA 60.142 45.833 0.00 0.00 0.00 2.85
140 141 5.340439 AGAGTATTTTGGGTCGAGGTTAG 57.660 43.478 0.00 0.00 0.00 2.34
141 142 3.869832 GAGTATTTTGGGTCGAGGTTAGC 59.130 47.826 0.00 0.00 0.00 3.09
142 143 1.734163 ATTTTGGGTCGAGGTTAGCG 58.266 50.000 0.00 0.00 0.00 4.26
143 144 0.320946 TTTTGGGTCGAGGTTAGCGG 60.321 55.000 0.00 0.00 0.00 5.52
144 145 2.791501 TTTGGGTCGAGGTTAGCGGC 62.792 60.000 0.00 0.00 0.00 6.53
145 146 3.459063 GGGTCGAGGTTAGCGGCT 61.459 66.667 7.98 7.98 33.20 5.52
146 147 2.123428 GGGTCGAGGTTAGCGGCTA 61.123 63.158 5.42 5.42 33.20 3.93
147 148 1.065436 GGTCGAGGTTAGCGGCTAC 59.935 63.158 9.68 5.23 33.20 3.58
148 149 1.298190 GTCGAGGTTAGCGGCTACG 60.298 63.158 9.68 10.13 44.63 3.51
149 150 1.746615 TCGAGGTTAGCGGCTACGT 60.747 57.895 9.68 6.83 43.45 3.57
150 151 1.138247 CGAGGTTAGCGGCTACGTT 59.862 57.895 9.68 0.00 43.45 3.99
151 152 0.378257 CGAGGTTAGCGGCTACGTTA 59.622 55.000 9.68 0.00 43.45 3.18
152 153 1.596464 CGAGGTTAGCGGCTACGTTAG 60.596 57.143 9.68 0.00 43.45 2.34
169 170 6.158023 ACGTTAGCATATGGTAAAGTAGCT 57.842 37.500 31.39 15.91 44.42 3.32
170 171 7.281040 ACGTTAGCATATGGTAAAGTAGCTA 57.719 36.000 31.39 11.59 44.42 3.32
171 172 7.719483 ACGTTAGCATATGGTAAAGTAGCTAA 58.281 34.615 31.39 15.87 44.42 3.09
172 173 8.365647 ACGTTAGCATATGGTAAAGTAGCTAAT 58.634 33.333 31.39 14.55 44.42 1.73
173 174 9.204570 CGTTAGCATATGGTAAAGTAGCTAATT 57.795 33.333 24.83 0.00 42.69 1.40
176 177 8.839310 AGCATATGGTAAAGTAGCTAATTCTG 57.161 34.615 6.93 0.00 0.00 3.02
177 178 8.432805 AGCATATGGTAAAGTAGCTAATTCTGT 58.567 33.333 6.93 0.00 0.00 3.41
178 179 9.057089 GCATATGGTAAAGTAGCTAATTCTGTT 57.943 33.333 6.93 0.00 0.00 3.16
183 184 9.953565 TGGTAAAGTAGCTAATTCTGTTACATT 57.046 29.630 6.93 0.00 0.00 2.71
208 209 9.609346 TTTACTAAATGACAGATAAGGCCTAAC 57.391 33.333 5.16 0.00 0.00 2.34
209 210 7.439108 ACTAAATGACAGATAAGGCCTAACT 57.561 36.000 5.16 2.61 0.00 2.24
210 211 8.548880 ACTAAATGACAGATAAGGCCTAACTA 57.451 34.615 5.16 0.00 0.00 2.24
211 212 9.160412 ACTAAATGACAGATAAGGCCTAACTAT 57.840 33.333 5.16 0.00 0.00 2.12
217 218 9.832445 TGACAGATAAGGCCTAACTATTAAAAG 57.168 33.333 5.16 0.00 0.00 2.27
218 219 9.274206 GACAGATAAGGCCTAACTATTAAAAGG 57.726 37.037 5.16 0.00 0.00 3.11
219 220 8.779031 ACAGATAAGGCCTAACTATTAAAAGGT 58.221 33.333 5.16 0.00 0.00 3.50
220 221 9.628500 CAGATAAGGCCTAACTATTAAAAGGTT 57.372 33.333 5.16 0.00 0.00 3.50
226 227 9.896645 AGGCCTAACTATTAAAAGGTTTAGTAC 57.103 33.333 1.29 0.00 0.00 2.73
227 228 9.671279 GGCCTAACTATTAAAAGGTTTAGTACA 57.329 33.333 0.00 0.00 0.00 2.90
237 238 6.417191 AAAGGTTTAGTACACATGTATGCG 57.583 37.500 0.00 0.00 32.54 4.73
238 239 4.439057 AGGTTTAGTACACATGTATGCGG 58.561 43.478 0.00 0.00 32.54 5.69
239 240 4.081309 AGGTTTAGTACACATGTATGCGGT 60.081 41.667 0.00 0.00 32.54 5.68
240 241 5.127519 AGGTTTAGTACACATGTATGCGGTA 59.872 40.000 0.00 0.00 32.54 4.02
241 242 5.232838 GGTTTAGTACACATGTATGCGGTAC 59.767 44.000 13.01 13.01 39.84 3.34
242 243 3.074504 AGTACACATGTATGCGGTACG 57.925 47.619 14.32 0.00 43.90 3.67
260 261 3.777465 ACGCGAGTATGAGTATTGTGT 57.223 42.857 15.93 0.00 46.88 3.72
261 262 3.692576 ACGCGAGTATGAGTATTGTGTC 58.307 45.455 15.93 0.00 46.88 3.67
262 263 3.128068 ACGCGAGTATGAGTATTGTGTCA 59.872 43.478 15.93 0.00 46.88 3.58
263 264 4.202020 ACGCGAGTATGAGTATTGTGTCAT 60.202 41.667 15.93 0.00 46.88 3.06
264 265 5.008316 ACGCGAGTATGAGTATTGTGTCATA 59.992 40.000 15.93 0.00 46.88 2.15
269 270 3.812156 TGAGTATTGTGTCATACCCGG 57.188 47.619 0.00 0.00 0.00 5.73
270 271 2.159014 TGAGTATTGTGTCATACCCGGC 60.159 50.000 0.00 0.00 0.00 6.13
281 282 3.985925 GTCATACCCGGCTTATAAACTCG 59.014 47.826 0.00 0.00 0.00 4.18
288 289 3.985925 CCGGCTTATAAACTCGTGGATAC 59.014 47.826 0.00 0.00 0.00 2.24
292 293 6.361748 CGGCTTATAAACTCGTGGATACTTAC 59.638 42.308 0.00 0.00 37.61 2.34
304 305 7.099120 TCGTGGATACTTACCTTTTCTAAACC 58.901 38.462 0.00 0.00 37.61 3.27
308 309 8.105197 TGGATACTTACCTTTTCTAAACCCTTC 58.895 37.037 0.00 0.00 37.61 3.46
348 349 0.184933 TCAGGTTCCTTGGTTGTGGG 59.815 55.000 0.00 0.00 0.00 4.61
351 352 1.854280 AGGTTCCTTGGTTGTGGGTAA 59.146 47.619 0.00 0.00 0.00 2.85
353 354 2.363038 GGTTCCTTGGTTGTGGGTAAAC 59.637 50.000 0.00 0.00 0.00 2.01
376 377 0.257039 GCCATGTTGAGGGGAGATGT 59.743 55.000 0.00 0.00 0.00 3.06
381 382 1.001974 TGTTGAGGGGAGATGTTCACG 59.998 52.381 0.00 0.00 0.00 4.35
436 437 6.314896 CGCCCTCCATCTCAAAATATAAGATC 59.685 42.308 0.00 0.00 0.00 2.75
535 536 4.566759 TCAGACACAAGCGCTCATATTTAC 59.433 41.667 12.06 0.00 0.00 2.01
536 537 4.329801 CAGACACAAGCGCTCATATTTACA 59.670 41.667 12.06 0.00 0.00 2.41
549 550 6.238103 GCTCATATTTACACGCACACACTTAT 60.238 38.462 0.00 0.00 0.00 1.73
550 551 7.603963 TCATATTTACACGCACACACTTATT 57.396 32.000 0.00 0.00 0.00 1.40
551 552 7.680982 TCATATTTACACGCACACACTTATTC 58.319 34.615 0.00 0.00 0.00 1.75
556 557 3.932710 ACACGCACACACTTATTCCTATG 59.067 43.478 0.00 0.00 0.00 2.23
561 562 4.494199 GCACACACTTATTCCTATGAACGC 60.494 45.833 0.00 0.00 32.13 4.84
567 568 4.630069 ACTTATTCCTATGAACGCACACAC 59.370 41.667 0.00 0.00 32.13 3.82
577 578 0.320421 ACGCACACACATACACCTCC 60.320 55.000 0.00 0.00 0.00 4.30
606 607 1.480137 AGCACCTTCGAGAGATTGAGG 59.520 52.381 0.00 0.00 40.64 3.86
608 609 1.205655 CACCTTCGAGAGATTGAGGCA 59.794 52.381 0.00 0.00 38.85 4.75
610 611 1.569708 CTTCGAGAGATTGAGGCAGC 58.430 55.000 0.00 0.00 41.60 5.25
615 616 3.056962 TCGAGAGATTGAGGCAGCATATC 60.057 47.826 0.00 0.00 33.31 1.63
618 619 4.834534 AGAGATTGAGGCAGCATATCATC 58.165 43.478 0.00 0.00 0.00 2.92
621 622 6.212993 AGAGATTGAGGCAGCATATCATCTTA 59.787 38.462 0.00 0.00 0.00 2.10
650 651 2.794910 CAAAGTCACCATAGGCGTATCG 59.205 50.000 0.00 0.00 0.00 2.92
672 679 2.398588 AGCCGATGGAAATGTCTCCTA 58.601 47.619 0.00 0.00 36.35 2.94
677 684 4.181578 CGATGGAAATGTCTCCTAAACGT 58.818 43.478 0.00 0.00 36.35 3.99
704 711 9.241317 GCATCGTCAAAGATCATGAAATAAATT 57.759 29.630 0.00 0.00 0.00 1.82
729 736 5.712217 AAAAATGCGAGCATCATGATTTG 57.288 34.783 11.26 0.00 35.31 2.32
730 737 4.380841 AAATGCGAGCATCATGATTTGT 57.619 36.364 11.26 0.00 35.31 2.83
733 740 2.613595 TGCGAGCATCATGATTTGTACC 59.386 45.455 5.16 0.00 33.17 3.34
737 744 3.559069 AGCATCATGATTTGTACCCTGG 58.441 45.455 5.16 0.00 0.00 4.45
823 830 5.667539 AGGGAATAGATATCGTGTCATGG 57.332 43.478 0.00 0.00 0.00 3.66
838 845 1.557832 TCATGGGTAGGGTTTCCTTCG 59.442 52.381 0.00 0.00 41.56 3.79
851 858 0.611714 TCCTTCGGGCCAAGTTACTC 59.388 55.000 4.39 0.00 34.44 2.59
1272 1297 5.452077 CGAGGACGAAATTAAGGAGGAAGAT 60.452 44.000 0.00 0.00 42.66 2.40
1391 3503 1.079543 CGCTGGAGGGTCTTGTCAG 60.080 63.158 0.00 0.00 0.00 3.51
1481 3593 4.577246 CCTCCTCGGCGCTGTAGC 62.577 72.222 17.37 0.00 37.78 3.58
1667 3785 1.075601 TCCAAGATTCTTGGGGCACT 58.924 50.000 34.42 0.00 39.96 4.40
1737 3855 2.013563 GCCTCGATTGATCTTGGTGCA 61.014 52.381 0.00 0.00 0.00 4.57
1788 3957 1.374758 GACACCCAGGAACGCAGAG 60.375 63.158 0.00 0.00 0.00 3.35
1848 4020 2.959030 ACACACACAGACTCTGAAGCTA 59.041 45.455 13.25 0.00 35.18 3.32
2355 4535 3.030652 CCCACCAAGTTGTCGCAC 58.969 61.111 1.45 0.00 0.00 5.34
2400 4580 0.815213 GCACAGTTGAGCACCTCACA 60.815 55.000 0.00 0.00 40.46 3.58
2562 4742 5.415221 CAAGAGTTCTATGTCAGGAAGGTC 58.585 45.833 0.00 0.00 0.00 3.85
2567 4747 4.142609 TCTATGTCAGGAAGGTCAATGC 57.857 45.455 0.00 0.00 0.00 3.56
2568 4748 2.134789 ATGTCAGGAAGGTCAATGCC 57.865 50.000 0.00 0.00 0.00 4.40
2582 4762 2.818130 AATGCCGCATTGAACAAGTT 57.182 40.000 17.85 0.00 32.39 2.66
2583 4763 2.818130 ATGCCGCATTGAACAAGTTT 57.182 40.000 0.00 0.00 0.00 2.66
2664 4844 6.014242 TGTGTATCAGGATTCAAAGTGACTCT 60.014 38.462 0.00 0.00 0.00 3.24
2735 4915 2.288666 CGGTGTGAATCCCAAGGTATG 58.711 52.381 0.00 0.00 0.00 2.39
2790 4970 9.927081 AAGAGGTTCAAATATGAGTATTTCCAT 57.073 29.630 0.00 0.00 38.21 3.41
2877 5057 4.034510 GCTGAGTGTAGCAATGGTGATAAC 59.965 45.833 0.00 0.00 43.17 1.89
2888 5068 3.026707 TGGTGATAACGATGAGGAGGA 57.973 47.619 0.00 0.00 0.00 3.71
3175 5355 7.148306 GCGATACACTTCCTTTTCCTTTTATCA 60.148 37.037 0.00 0.00 0.00 2.15
3235 5415 6.109156 TCTTATGGCAGTAAACTTCTGTGA 57.891 37.500 0.00 0.00 35.60 3.58
3237 5417 6.595326 TCTTATGGCAGTAAACTTCTGTGATG 59.405 38.462 0.00 0.00 35.60 3.07
3243 5423 5.237344 GCAGTAAACTTCTGTGATGTCTGTT 59.763 40.000 0.00 0.00 35.60 3.16
3312 5492 4.253685 TCTCTTTTTATGTTGAGGCCGAG 58.746 43.478 0.00 0.00 0.00 4.63
3316 5496 2.910688 TTATGTTGAGGCCGAGGATC 57.089 50.000 0.00 0.00 0.00 3.36
3415 5595 2.103432 TGGAACATATAATGGACGCCGT 59.897 45.455 0.00 0.00 33.60 5.68
3475 5655 7.792374 TGTCCTAATTCAAACTATCATCAGC 57.208 36.000 0.00 0.00 0.00 4.26
3750 6202 6.898041 TCATGTTCTAACATTCAACCTTTCG 58.102 36.000 5.60 0.00 46.95 3.46
3777 6229 7.968014 AGATTTGATAGAATGGGAGCTTTTT 57.032 32.000 0.00 0.00 0.00 1.94
3899 6351 1.002430 TCTGTCAGAGTTGTCCATGGC 59.998 52.381 6.96 2.72 0.00 4.40
3904 6356 0.617413 AGAGTTGTCCATGGCCTGAG 59.383 55.000 6.96 0.00 0.00 3.35
3931 6383 1.065401 TCGGACAAGCAGCAACAAAAG 59.935 47.619 0.00 0.00 0.00 2.27
3932 6384 1.856802 GGACAAGCAGCAACAAAAGG 58.143 50.000 0.00 0.00 0.00 3.11
4069 9758 4.573900 ACAGAGGAACAGAGCAGTAATTG 58.426 43.478 0.00 0.00 0.00 2.32
4079 9768 9.899226 GAACAGAGCAGTAATTGTTTTCTTAAT 57.101 29.630 0.00 0.00 34.18 1.40
4152 9842 5.828299 TTTGTCGGGGTAATGATTTCATC 57.172 39.130 0.00 0.00 35.10 2.92
4206 9897 3.636300 CCGATGAAATAAAATCAGGGGCA 59.364 43.478 0.00 0.00 0.00 5.36
4207 9898 4.281688 CCGATGAAATAAAATCAGGGGCAT 59.718 41.667 0.00 0.00 0.00 4.40
4208 9899 5.464168 CGATGAAATAAAATCAGGGGCATC 58.536 41.667 0.00 0.00 0.00 3.91
4275 9966 3.337358 TGACTCATGGTTGCATGTACTG 58.663 45.455 0.00 0.00 34.39 2.74
4287 9978 2.738846 GCATGTACTGTGAGTCAACCTG 59.261 50.000 0.00 0.00 0.00 4.00
4323 10014 3.947910 AGTTGGGAGCATTCAACAATG 57.052 42.857 15.06 0.00 43.91 2.82
4324 10015 3.499338 AGTTGGGAGCATTCAACAATGA 58.501 40.909 15.06 0.00 43.91 2.57
4325 10016 3.508793 AGTTGGGAGCATTCAACAATGAG 59.491 43.478 15.06 0.00 43.91 2.90
4326 10017 3.159213 TGGGAGCATTCAACAATGAGT 57.841 42.857 0.00 0.00 41.97 3.41
4327 10018 3.084039 TGGGAGCATTCAACAATGAGTC 58.916 45.455 0.00 0.00 41.97 3.36
4328 10019 3.084039 GGGAGCATTCAACAATGAGTCA 58.916 45.455 0.00 0.00 41.97 3.41
4329 10020 3.507233 GGGAGCATTCAACAATGAGTCAA 59.493 43.478 0.00 0.00 41.97 3.18
4330 10021 4.159135 GGGAGCATTCAACAATGAGTCAAT 59.841 41.667 0.00 0.00 41.97 2.57
4331 10022 5.337009 GGGAGCATTCAACAATGAGTCAATT 60.337 40.000 0.00 0.00 41.97 2.32
4332 10023 6.127647 GGGAGCATTCAACAATGAGTCAATTA 60.128 38.462 0.00 0.00 41.97 1.40
4333 10024 6.749118 GGAGCATTCAACAATGAGTCAATTAC 59.251 38.462 0.00 0.00 41.97 1.89
4334 10025 7.218228 AGCATTCAACAATGAGTCAATTACA 57.782 32.000 0.00 0.00 41.97 2.41
4335 10026 7.833786 AGCATTCAACAATGAGTCAATTACAT 58.166 30.769 0.00 0.00 41.97 2.29
4336 10027 7.972277 AGCATTCAACAATGAGTCAATTACATC 59.028 33.333 0.00 0.00 41.97 3.06
4337 10028 7.756272 GCATTCAACAATGAGTCAATTACATCA 59.244 33.333 0.00 0.00 41.97 3.07
4338 10029 9.069078 CATTCAACAATGAGTCAATTACATCAC 57.931 33.333 0.00 0.00 41.97 3.06
4339 10030 7.984422 TCAACAATGAGTCAATTACATCACT 57.016 32.000 0.00 0.00 0.00 3.41
4340 10031 7.809665 TCAACAATGAGTCAATTACATCACTG 58.190 34.615 0.00 0.00 0.00 3.66
4341 10032 6.748333 ACAATGAGTCAATTACATCACTGG 57.252 37.500 0.00 0.00 0.00 4.00
4342 10033 6.240894 ACAATGAGTCAATTACATCACTGGT 58.759 36.000 0.00 0.00 0.00 4.00
4343 10034 6.149973 ACAATGAGTCAATTACATCACTGGTG 59.850 38.462 0.00 0.00 0.00 4.17
4344 10035 4.002982 TGAGTCAATTACATCACTGGTGC 58.997 43.478 0.00 0.00 0.00 5.01
4345 10036 4.256920 GAGTCAATTACATCACTGGTGCT 58.743 43.478 0.00 0.00 0.00 4.40
4346 10037 5.046663 TGAGTCAATTACATCACTGGTGCTA 60.047 40.000 0.00 0.00 0.00 3.49
4347 10038 5.423015 AGTCAATTACATCACTGGTGCTAG 58.577 41.667 0.00 0.00 0.00 3.42
4348 10039 5.187772 AGTCAATTACATCACTGGTGCTAGA 59.812 40.000 0.00 0.00 0.00 2.43
4349 10040 5.874810 GTCAATTACATCACTGGTGCTAGAA 59.125 40.000 0.00 0.00 0.00 2.10
4350 10041 5.874810 TCAATTACATCACTGGTGCTAGAAC 59.125 40.000 0.00 0.00 0.00 3.01
4351 10042 5.683876 ATTACATCACTGGTGCTAGAACT 57.316 39.130 0.00 0.00 0.00 3.01
4352 10043 5.483685 TTACATCACTGGTGCTAGAACTT 57.516 39.130 0.00 0.00 0.00 2.66
4353 10044 3.668447 ACATCACTGGTGCTAGAACTTG 58.332 45.455 0.00 0.00 0.00 3.16
4354 10045 2.839486 TCACTGGTGCTAGAACTTGG 57.161 50.000 0.00 0.00 0.00 3.61
4355 10046 2.047061 TCACTGGTGCTAGAACTTGGT 58.953 47.619 0.00 0.00 0.00 3.67
4356 10047 3.236047 TCACTGGTGCTAGAACTTGGTA 58.764 45.455 0.00 0.00 0.00 3.25
4357 10048 3.006537 TCACTGGTGCTAGAACTTGGTAC 59.993 47.826 0.00 0.00 0.00 3.34
4358 10049 2.969950 ACTGGTGCTAGAACTTGGTACA 59.030 45.455 0.00 0.00 0.00 2.90
4359 10050 3.006967 ACTGGTGCTAGAACTTGGTACAG 59.993 47.826 0.00 1.04 42.39 2.74
4360 10051 3.236047 TGGTGCTAGAACTTGGTACAGA 58.764 45.455 0.00 0.00 42.39 3.41
4361 10052 3.838317 TGGTGCTAGAACTTGGTACAGAT 59.162 43.478 0.00 0.00 42.39 2.90
4362 10053 4.184629 GGTGCTAGAACTTGGTACAGATG 58.815 47.826 0.00 0.00 42.39 2.90
4363 10054 4.081642 GGTGCTAGAACTTGGTACAGATGA 60.082 45.833 0.00 0.00 42.39 2.92
4364 10055 4.865365 GTGCTAGAACTTGGTACAGATGAC 59.135 45.833 0.00 0.00 42.39 3.06
4365 10056 4.081642 TGCTAGAACTTGGTACAGATGACC 60.082 45.833 0.00 0.00 42.39 4.02
4366 10057 4.081642 GCTAGAACTTGGTACAGATGACCA 60.082 45.833 0.00 0.00 45.38 4.02
4367 10058 4.273148 AGAACTTGGTACAGATGACCAC 57.727 45.455 0.00 0.00 46.70 4.16
4368 10059 3.904339 AGAACTTGGTACAGATGACCACT 59.096 43.478 0.00 0.00 46.70 4.00
4369 10060 4.348168 AGAACTTGGTACAGATGACCACTT 59.652 41.667 0.00 0.00 46.70 3.16
4370 10061 4.706842 ACTTGGTACAGATGACCACTTT 57.293 40.909 0.00 0.00 46.70 2.66
4371 10062 4.389374 ACTTGGTACAGATGACCACTTTG 58.611 43.478 0.00 0.00 46.70 2.77
4372 10063 3.417069 TGGTACAGATGACCACTTTGG 57.583 47.619 0.00 0.00 42.15 3.28
4384 10075 3.904136 CCACTTTGGTGCTAGAACTTG 57.096 47.619 0.00 0.00 41.75 3.16
4385 10076 3.214328 CCACTTTGGTGCTAGAACTTGT 58.786 45.455 0.00 0.00 41.75 3.16
4386 10077 3.003689 CCACTTTGGTGCTAGAACTTGTG 59.996 47.826 0.00 5.21 41.75 3.33
4387 10078 3.003689 CACTTTGGTGCTAGAACTTGTGG 59.996 47.826 0.00 0.00 36.61 4.17
4388 10079 3.214328 CTTTGGTGCTAGAACTTGTGGT 58.786 45.455 0.00 0.00 0.00 4.16
4389 10080 2.254546 TGGTGCTAGAACTTGTGGTG 57.745 50.000 0.00 0.00 0.00 4.17
4390 10081 1.488812 TGGTGCTAGAACTTGTGGTGT 59.511 47.619 0.00 0.00 0.00 4.16
4391 10082 2.701423 TGGTGCTAGAACTTGTGGTGTA 59.299 45.455 0.00 0.00 0.00 2.90
4392 10083 3.064931 GGTGCTAGAACTTGTGGTGTAC 58.935 50.000 0.00 0.00 0.00 2.90
4393 10084 3.493699 GGTGCTAGAACTTGTGGTGTACA 60.494 47.826 0.00 0.00 37.56 2.90
4394 10085 4.315803 GTGCTAGAACTTGTGGTGTACAT 58.684 43.478 0.00 0.00 39.48 2.29
4395 10086 5.475719 GTGCTAGAACTTGTGGTGTACATA 58.524 41.667 0.00 0.00 39.48 2.29
4396 10087 6.106673 GTGCTAGAACTTGTGGTGTACATAT 58.893 40.000 0.00 0.00 39.48 1.78
4397 10088 7.262772 GTGCTAGAACTTGTGGTGTACATATA 58.737 38.462 0.00 0.00 39.48 0.86
4398 10089 7.762615 GTGCTAGAACTTGTGGTGTACATATAA 59.237 37.037 0.00 0.00 39.48 0.98
4399 10090 7.979537 TGCTAGAACTTGTGGTGTACATATAAG 59.020 37.037 14.00 14.00 39.48 1.73
4400 10091 7.980099 GCTAGAACTTGTGGTGTACATATAAGT 59.020 37.037 14.92 14.92 39.48 2.24
4401 10092 9.302345 CTAGAACTTGTGGTGTACATATAAGTG 57.698 37.037 18.82 8.52 39.48 3.16
4402 10093 7.903145 AGAACTTGTGGTGTACATATAAGTGA 58.097 34.615 18.82 0.00 39.48 3.41
4403 10094 8.540388 AGAACTTGTGGTGTACATATAAGTGAT 58.460 33.333 18.82 11.68 39.48 3.06
4404 10095 9.162764 GAACTTGTGGTGTACATATAAGTGATT 57.837 33.333 18.82 9.14 39.48 2.57
4405 10096 8.718102 ACTTGTGGTGTACATATAAGTGATTC 57.282 34.615 17.96 0.00 39.48 2.52
4406 10097 8.318412 ACTTGTGGTGTACATATAAGTGATTCA 58.682 33.333 17.96 0.00 39.48 2.57
4407 10098 9.161629 CTTGTGGTGTACATATAAGTGATTCAA 57.838 33.333 0.00 0.00 39.48 2.69
4408 10099 8.716646 TGTGGTGTACATATAAGTGATTCAAG 57.283 34.615 0.00 0.00 33.42 3.02
4409 10100 8.536175 TGTGGTGTACATATAAGTGATTCAAGA 58.464 33.333 0.00 0.00 33.42 3.02
4410 10101 9.378551 GTGGTGTACATATAAGTGATTCAAGAA 57.621 33.333 0.00 0.00 0.00 2.52
4411 10102 9.378551 TGGTGTACATATAAGTGATTCAAGAAC 57.621 33.333 0.00 0.00 0.00 3.01
4412 10103 9.601217 GGTGTACATATAAGTGATTCAAGAACT 57.399 33.333 0.00 0.00 0.00 3.01
4416 10107 7.989826 ACATATAAGTGATTCAAGAACTTGGC 58.010 34.615 13.46 5.68 40.78 4.52
4417 10108 7.831193 ACATATAAGTGATTCAAGAACTTGGCT 59.169 33.333 13.46 2.89 40.78 4.75
4418 10109 8.680903 CATATAAGTGATTCAAGAACTTGGCTT 58.319 33.333 13.46 11.77 40.78 4.35
4419 10110 4.843220 AGTGATTCAAGAACTTGGCTTG 57.157 40.909 13.46 0.00 43.09 4.01
4423 10114 1.593196 TCAAGAACTTGGCTTGACGG 58.407 50.000 13.46 0.00 44.81 4.79
4424 10115 1.134220 TCAAGAACTTGGCTTGACGGT 60.134 47.619 13.46 0.00 44.81 4.83
4425 10116 1.002468 CAAGAACTTGGCTTGACGGTG 60.002 52.381 6.66 0.00 44.16 4.94
4426 10117 1.166531 AGAACTTGGCTTGACGGTGC 61.167 55.000 0.00 0.00 0.00 5.01
4427 10118 1.444119 GAACTTGGCTTGACGGTGCA 61.444 55.000 0.00 0.00 0.00 4.57
4428 10119 1.034838 AACTTGGCTTGACGGTGCAA 61.035 50.000 0.00 0.00 0.00 4.08
4429 10120 1.034838 ACTTGGCTTGACGGTGCAAA 61.035 50.000 0.00 0.00 0.00 3.68
4430 10121 0.314935 CTTGGCTTGACGGTGCAAAT 59.685 50.000 0.00 0.00 0.00 2.32
4431 10122 1.539388 CTTGGCTTGACGGTGCAAATA 59.461 47.619 0.00 0.00 0.00 1.40
4432 10123 0.878416 TGGCTTGACGGTGCAAATAC 59.122 50.000 0.00 0.00 0.00 1.89
4433 10124 0.179200 GGCTTGACGGTGCAAATACG 60.179 55.000 0.00 0.00 0.00 3.06
4434 10125 0.793861 GCTTGACGGTGCAAATACGA 59.206 50.000 8.11 0.00 0.00 3.43
4435 10126 1.396996 GCTTGACGGTGCAAATACGAT 59.603 47.619 8.11 0.00 0.00 3.73
4436 10127 2.787723 GCTTGACGGTGCAAATACGATG 60.788 50.000 8.11 0.00 0.00 3.84
4437 10128 2.087501 TGACGGTGCAAATACGATGT 57.912 45.000 8.11 0.00 0.00 3.06
4438 10129 2.418692 TGACGGTGCAAATACGATGTT 58.581 42.857 8.11 0.00 0.00 2.71
4439 10130 2.158645 TGACGGTGCAAATACGATGTTG 59.841 45.455 8.11 0.00 0.00 3.33
4447 10138 3.288242 CAAATACGATGTTGCATACGCC 58.712 45.455 0.00 0.00 37.32 5.68
4448 10139 2.526304 ATACGATGTTGCATACGCCT 57.474 45.000 0.00 0.00 37.32 5.52
4449 10140 2.303163 TACGATGTTGCATACGCCTT 57.697 45.000 0.00 0.00 37.32 4.35
4450 10141 1.006832 ACGATGTTGCATACGCCTTC 58.993 50.000 0.00 0.00 37.32 3.46
4451 10142 0.043053 CGATGTTGCATACGCCTTCG 60.043 55.000 0.00 0.00 42.43 3.79
4452 10143 0.304705 GATGTTGCATACGCCTTCGG 59.695 55.000 0.00 0.00 40.69 4.30
4453 10144 1.714899 ATGTTGCATACGCCTTCGGC 61.715 55.000 0.00 0.00 46.75 5.54
4462 10153 2.583593 GCCTTCGGCGCTGACTAG 60.584 66.667 20.84 14.84 39.62 2.57
4463 10154 2.105128 CCTTCGGCGCTGACTAGG 59.895 66.667 20.84 20.29 0.00 3.02
4464 10155 2.583593 CTTCGGCGCTGACTAGGC 60.584 66.667 20.84 0.00 0.00 3.93
4465 10156 3.356639 CTTCGGCGCTGACTAGGCA 62.357 63.158 20.84 0.00 0.00 4.75
4466 10157 2.635229 CTTCGGCGCTGACTAGGCAT 62.635 60.000 20.84 0.00 0.00 4.40
4467 10158 2.906182 TTCGGCGCTGACTAGGCATG 62.906 60.000 20.84 0.00 0.00 4.06
4468 10159 3.275338 GGCGCTGACTAGGCATGC 61.275 66.667 9.90 9.90 0.00 4.06
4469 10160 3.275338 GCGCTGACTAGGCATGCC 61.275 66.667 30.12 30.12 0.00 4.40
4470 10161 2.187685 CGCTGACTAGGCATGCCA 59.812 61.111 37.18 21.91 38.92 4.92
4471 10162 1.886313 CGCTGACTAGGCATGCCAG 60.886 63.158 37.18 30.38 38.92 4.85
4472 10163 2.185494 GCTGACTAGGCATGCCAGC 61.185 63.158 37.18 30.56 42.52 4.85
4473 10164 1.222661 CTGACTAGGCATGCCAGCA 59.777 57.895 37.18 26.48 38.92 4.41
4474 10165 0.179026 CTGACTAGGCATGCCAGCAT 60.179 55.000 37.18 19.98 38.92 3.79
4482 10173 2.124570 ATGCCAGCATGACGGGAC 60.125 61.111 3.90 0.00 39.69 4.46
4483 10174 3.704231 ATGCCAGCATGACGGGACC 62.704 63.158 3.90 0.00 39.69 4.46
4485 10176 3.716195 CCAGCATGACGGGACCCA 61.716 66.667 12.15 0.00 39.69 4.51
4486 10177 2.436646 CAGCATGACGGGACCCAC 60.437 66.667 12.15 4.46 39.69 4.61
4487 10178 2.607750 AGCATGACGGGACCCACT 60.608 61.111 12.15 0.00 0.00 4.00
4488 10179 2.436646 GCATGACGGGACCCACTG 60.437 66.667 12.15 2.84 0.00 3.66
4489 10180 2.436646 CATGACGGGACCCACTGC 60.437 66.667 12.15 0.00 0.00 4.40
4490 10181 4.082523 ATGACGGGACCCACTGCG 62.083 66.667 12.15 0.00 0.00 5.18
4495 10186 4.699522 GGGACCCACTGCGGTGAC 62.700 72.222 27.46 16.34 45.61 3.67
4496 10187 3.936203 GGACCCACTGCGGTGACA 61.936 66.667 27.46 0.00 45.61 3.58
4497 10188 2.357517 GACCCACTGCGGTGACAG 60.358 66.667 27.46 16.64 45.61 3.51
4498 10189 2.842462 ACCCACTGCGGTGACAGA 60.842 61.111 27.46 0.00 45.61 3.41
4499 10190 2.377628 GACCCACTGCGGTGACAGAA 62.378 60.000 27.46 0.00 45.61 3.02
4500 10191 1.227823 CCCACTGCGGTGACAGAAA 60.228 57.895 27.46 0.00 45.61 2.52
4501 10192 0.817634 CCCACTGCGGTGACAGAAAA 60.818 55.000 27.46 0.00 45.61 2.29
4502 10193 0.588252 CCACTGCGGTGACAGAAAAG 59.412 55.000 27.46 3.50 45.61 2.27
4503 10194 0.588252 CACTGCGGTGACAGAAAAGG 59.412 55.000 21.59 0.00 45.61 3.11
4504 10195 0.535102 ACTGCGGTGACAGAAAAGGG 60.535 55.000 0.00 0.00 40.25 3.95
4505 10196 0.250295 CTGCGGTGACAGAAAAGGGA 60.250 55.000 0.00 0.00 40.25 4.20
4506 10197 0.250295 TGCGGTGACAGAAAAGGGAG 60.250 55.000 0.00 0.00 0.00 4.30
4507 10198 0.955919 GCGGTGACAGAAAAGGGAGG 60.956 60.000 0.00 0.00 0.00 4.30
4508 10199 0.321653 CGGTGACAGAAAAGGGAGGG 60.322 60.000 0.00 0.00 0.00 4.30
4509 10200 0.609406 GGTGACAGAAAAGGGAGGGC 60.609 60.000 0.00 0.00 0.00 5.19
4510 10201 0.110486 GTGACAGAAAAGGGAGGGCA 59.890 55.000 0.00 0.00 0.00 5.36
4511 10202 0.401738 TGACAGAAAAGGGAGGGCAG 59.598 55.000 0.00 0.00 0.00 4.85
4512 10203 0.322906 GACAGAAAAGGGAGGGCAGG 60.323 60.000 0.00 0.00 0.00 4.85
4513 10204 1.000396 CAGAAAAGGGAGGGCAGGG 60.000 63.158 0.00 0.00 0.00 4.45
4514 10205 2.363018 GAAAAGGGAGGGCAGGGC 60.363 66.667 0.00 0.00 0.00 5.19
4515 10206 4.366684 AAAAGGGAGGGCAGGGCG 62.367 66.667 0.00 0.00 0.00 6.13
4530 10221 4.011046 GCGTGTGGCCTGTTTTTG 57.989 55.556 3.32 0.00 34.80 2.44
4531 10222 1.140804 GCGTGTGGCCTGTTTTTGT 59.859 52.632 3.32 0.00 34.80 2.83
4532 10223 0.459411 GCGTGTGGCCTGTTTTTGTT 60.459 50.000 3.32 0.00 34.80 2.83
4533 10224 2.003196 CGTGTGGCCTGTTTTTGTTT 57.997 45.000 3.32 0.00 0.00 2.83
4534 10225 2.342179 CGTGTGGCCTGTTTTTGTTTT 58.658 42.857 3.32 0.00 0.00 2.43
4535 10226 2.093467 CGTGTGGCCTGTTTTTGTTTTG 59.907 45.455 3.32 0.00 0.00 2.44
4536 10227 2.079925 TGTGGCCTGTTTTTGTTTTGC 58.920 42.857 3.32 0.00 0.00 3.68
4537 10228 1.061857 GTGGCCTGTTTTTGTTTTGCG 59.938 47.619 3.32 0.00 0.00 4.85
4538 10229 1.066858 TGGCCTGTTTTTGTTTTGCGA 60.067 42.857 3.32 0.00 0.00 5.10
4539 10230 2.003301 GGCCTGTTTTTGTTTTGCGAA 58.997 42.857 0.00 0.00 0.00 4.70
4540 10231 2.416893 GGCCTGTTTTTGTTTTGCGAAA 59.583 40.909 0.00 0.00 0.00 3.46
4541 10232 3.120165 GGCCTGTTTTTGTTTTGCGAAAA 60.120 39.130 0.00 0.00 37.94 2.29
4542 10233 4.438065 GGCCTGTTTTTGTTTTGCGAAAAT 60.438 37.500 0.00 0.00 41.13 1.82
4543 10234 4.728131 GCCTGTTTTTGTTTTGCGAAAATC 59.272 37.500 0.00 0.00 41.13 2.17
4544 10235 5.262422 CCTGTTTTTGTTTTGCGAAAATCC 58.738 37.500 0.00 0.00 41.13 3.01
4545 10236 5.223225 TGTTTTTGTTTTGCGAAAATCCC 57.777 34.783 0.00 0.00 41.13 3.85
4546 10237 4.095036 TGTTTTTGTTTTGCGAAAATCCCC 59.905 37.500 0.00 0.00 41.13 4.81
4547 10238 3.828875 TTTGTTTTGCGAAAATCCCCT 57.171 38.095 0.00 0.00 32.22 4.79
4548 10239 3.378911 TTGTTTTGCGAAAATCCCCTC 57.621 42.857 0.00 0.00 32.22 4.30
4549 10240 2.311463 TGTTTTGCGAAAATCCCCTCA 58.689 42.857 0.00 0.00 32.22 3.86
4550 10241 2.695666 TGTTTTGCGAAAATCCCCTCAA 59.304 40.909 0.00 0.00 32.22 3.02
4551 10242 3.057019 GTTTTGCGAAAATCCCCTCAAC 58.943 45.455 0.00 0.00 32.22 3.18
4552 10243 1.988293 TTGCGAAAATCCCCTCAACA 58.012 45.000 0.00 0.00 0.00 3.33
4553 10244 2.214376 TGCGAAAATCCCCTCAACAT 57.786 45.000 0.00 0.00 0.00 2.71
4554 10245 2.524306 TGCGAAAATCCCCTCAACATT 58.476 42.857 0.00 0.00 0.00 2.71
4555 10246 2.896685 TGCGAAAATCCCCTCAACATTT 59.103 40.909 0.00 0.00 0.00 2.32
4556 10247 3.323403 TGCGAAAATCCCCTCAACATTTT 59.677 39.130 0.00 0.00 33.39 1.82
4557 10248 4.202305 TGCGAAAATCCCCTCAACATTTTT 60.202 37.500 0.00 0.00 31.35 1.94
4603 10294 7.881775 AAAAATAAATTGGTCCGCTAGAGAT 57.118 32.000 0.00 0.00 0.00 2.75
4604 10295 7.881775 AAAATAAATTGGTCCGCTAGAGATT 57.118 32.000 0.00 0.00 0.00 2.40
4605 10296 7.497925 AAATAAATTGGTCCGCTAGAGATTC 57.502 36.000 0.00 0.00 0.00 2.52
4606 10297 4.487714 AAATTGGTCCGCTAGAGATTCA 57.512 40.909 0.00 0.00 0.00 2.57
4607 10298 4.487714 AATTGGTCCGCTAGAGATTCAA 57.512 40.909 0.00 0.00 0.00 2.69
4608 10299 3.973206 TTGGTCCGCTAGAGATTCAAA 57.027 42.857 0.00 0.00 0.00 2.69
4609 10300 3.247006 TGGTCCGCTAGAGATTCAAAC 57.753 47.619 0.00 0.00 0.00 2.93
4610 10301 2.093658 TGGTCCGCTAGAGATTCAAACC 60.094 50.000 0.00 0.00 0.00 3.27
4611 10302 2.093658 GGTCCGCTAGAGATTCAAACCA 60.094 50.000 0.00 0.00 0.00 3.67
4612 10303 3.190874 GTCCGCTAGAGATTCAAACCAG 58.809 50.000 0.00 0.00 0.00 4.00
4613 10304 1.936547 CCGCTAGAGATTCAAACCAGC 59.063 52.381 0.00 0.00 0.00 4.85
4614 10305 1.590238 CGCTAGAGATTCAAACCAGCG 59.410 52.381 0.00 0.00 43.47 5.18
4615 10306 2.893637 GCTAGAGATTCAAACCAGCGA 58.106 47.619 0.00 0.00 0.00 4.93
4616 10307 2.605366 GCTAGAGATTCAAACCAGCGAC 59.395 50.000 0.00 0.00 0.00 5.19
4617 10308 2.100605 AGAGATTCAAACCAGCGACC 57.899 50.000 0.00 0.00 0.00 4.79
4618 10309 1.625818 AGAGATTCAAACCAGCGACCT 59.374 47.619 0.00 0.00 0.00 3.85
4619 10310 1.734465 GAGATTCAAACCAGCGACCTG 59.266 52.381 0.00 0.00 38.85 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.709495 TTTTCATTCAATCATTTCAAAGTAGGG 57.291 29.630 0.00 0.00 0.00 3.53
38 39 8.180267 CGTGATTTCTCTAATTTTGCTGATCTT 58.820 33.333 0.00 0.00 0.00 2.40
39 40 7.550551 TCGTGATTTCTCTAATTTTGCTGATCT 59.449 33.333 0.00 0.00 0.00 2.75
40 41 7.688372 TCGTGATTTCTCTAATTTTGCTGATC 58.312 34.615 0.00 0.00 0.00 2.92
41 42 7.335422 ACTCGTGATTTCTCTAATTTTGCTGAT 59.665 33.333 0.00 0.00 0.00 2.90
42 43 6.650807 ACTCGTGATTTCTCTAATTTTGCTGA 59.349 34.615 0.00 0.00 0.00 4.26
43 44 6.835914 ACTCGTGATTTCTCTAATTTTGCTG 58.164 36.000 0.00 0.00 0.00 4.41
44 45 7.173218 TGAACTCGTGATTTCTCTAATTTTGCT 59.827 33.333 0.00 0.00 0.00 3.91
45 46 7.269297 GTGAACTCGTGATTTCTCTAATTTTGC 59.731 37.037 0.00 0.00 0.00 3.68
46 47 8.282592 TGTGAACTCGTGATTTCTCTAATTTTG 58.717 33.333 0.00 0.00 0.00 2.44
47 48 8.378172 TGTGAACTCGTGATTTCTCTAATTTT 57.622 30.769 0.00 0.00 0.00 1.82
48 49 7.962964 TGTGAACTCGTGATTTCTCTAATTT 57.037 32.000 0.00 0.00 0.00 1.82
49 50 7.962964 TTGTGAACTCGTGATTTCTCTAATT 57.037 32.000 0.00 0.00 0.00 1.40
50 51 7.441157 TGTTTGTGAACTCGTGATTTCTCTAAT 59.559 33.333 0.00 0.00 36.70 1.73
51 52 6.759356 TGTTTGTGAACTCGTGATTTCTCTAA 59.241 34.615 0.00 0.18 36.70 2.10
52 53 6.277605 TGTTTGTGAACTCGTGATTTCTCTA 58.722 36.000 0.00 0.00 36.70 2.43
53 54 5.116180 TGTTTGTGAACTCGTGATTTCTCT 58.884 37.500 0.00 0.00 36.70 3.10
54 55 5.403897 TGTTTGTGAACTCGTGATTTCTC 57.596 39.130 0.00 0.00 36.70 2.87
55 56 5.584649 TCTTGTTTGTGAACTCGTGATTTCT 59.415 36.000 0.00 0.00 36.70 2.52
56 57 5.806286 TCTTGTTTGTGAACTCGTGATTTC 58.194 37.500 0.00 0.00 36.70 2.17
57 58 5.811399 TCTTGTTTGTGAACTCGTGATTT 57.189 34.783 0.00 0.00 36.70 2.17
58 59 5.333339 CGATCTTGTTTGTGAACTCGTGATT 60.333 40.000 0.00 0.00 36.70 2.57
59 60 4.150627 CGATCTTGTTTGTGAACTCGTGAT 59.849 41.667 0.00 0.00 36.70 3.06
60 61 3.489416 CGATCTTGTTTGTGAACTCGTGA 59.511 43.478 0.00 0.00 36.70 4.35
61 62 3.489416 TCGATCTTGTTTGTGAACTCGTG 59.511 43.478 0.00 0.00 36.70 4.35
62 63 3.489785 GTCGATCTTGTTTGTGAACTCGT 59.510 43.478 0.00 0.00 36.70 4.18
63 64 3.420544 CGTCGATCTTGTTTGTGAACTCG 60.421 47.826 0.00 0.00 36.70 4.18
64 65 3.661936 GCGTCGATCTTGTTTGTGAACTC 60.662 47.826 0.00 0.00 36.70 3.01
65 66 2.221055 GCGTCGATCTTGTTTGTGAACT 59.779 45.455 0.00 0.00 36.70 3.01
66 67 2.033236 TGCGTCGATCTTGTTTGTGAAC 60.033 45.455 0.00 0.00 36.29 3.18
67 68 2.205911 TGCGTCGATCTTGTTTGTGAA 58.794 42.857 0.00 0.00 0.00 3.18
68 69 1.859383 TGCGTCGATCTTGTTTGTGA 58.141 45.000 0.00 0.00 0.00 3.58
69 70 2.880822 ATGCGTCGATCTTGTTTGTG 57.119 45.000 0.00 0.00 0.00 3.33
70 71 3.896648 AAATGCGTCGATCTTGTTTGT 57.103 38.095 0.00 0.00 0.00 2.83
71 72 5.143660 TGTAAAATGCGTCGATCTTGTTTG 58.856 37.500 0.00 0.00 0.00 2.93
72 73 5.351233 TGTAAAATGCGTCGATCTTGTTT 57.649 34.783 0.00 0.00 0.00 2.83
73 74 5.178623 TCTTGTAAAATGCGTCGATCTTGTT 59.821 36.000 0.00 0.00 0.00 2.83
74 75 4.688879 TCTTGTAAAATGCGTCGATCTTGT 59.311 37.500 0.00 0.00 0.00 3.16
75 76 5.203358 TCTTGTAAAATGCGTCGATCTTG 57.797 39.130 0.00 0.00 0.00 3.02
76 77 5.276395 CGATCTTGTAAAATGCGTCGATCTT 60.276 40.000 0.00 0.00 0.00 2.40
77 78 4.207224 CGATCTTGTAAAATGCGTCGATCT 59.793 41.667 0.00 0.00 0.00 2.75
78 79 4.026804 ACGATCTTGTAAAATGCGTCGATC 60.027 41.667 0.00 0.00 0.00 3.69
79 80 3.863424 ACGATCTTGTAAAATGCGTCGAT 59.137 39.130 0.00 0.00 0.00 3.59
80 81 3.060230 CACGATCTTGTAAAATGCGTCGA 59.940 43.478 0.00 0.00 0.00 4.20
81 82 3.333723 CACGATCTTGTAAAATGCGTCG 58.666 45.455 0.00 0.00 0.00 5.12
82 83 3.091417 GCACGATCTTGTAAAATGCGTC 58.909 45.455 0.73 0.00 0.00 5.19
83 84 2.482336 TGCACGATCTTGTAAAATGCGT 59.518 40.909 0.73 0.00 34.32 5.24
84 85 2.840176 GTGCACGATCTTGTAAAATGCG 59.160 45.455 0.00 0.00 34.32 4.73
85 86 3.820689 TGTGCACGATCTTGTAAAATGC 58.179 40.909 13.13 0.00 0.00 3.56
86 87 4.794762 CCATGTGCACGATCTTGTAAAATG 59.205 41.667 13.13 5.44 0.00 2.32
87 88 4.142403 CCCATGTGCACGATCTTGTAAAAT 60.142 41.667 13.13 0.00 0.00 1.82
88 89 3.190327 CCCATGTGCACGATCTTGTAAAA 59.810 43.478 13.13 0.00 0.00 1.52
89 90 2.746904 CCCATGTGCACGATCTTGTAAA 59.253 45.455 13.13 0.00 0.00 2.01
90 91 2.290008 ACCCATGTGCACGATCTTGTAA 60.290 45.455 13.13 0.00 0.00 2.41
91 92 1.277842 ACCCATGTGCACGATCTTGTA 59.722 47.619 13.13 0.00 0.00 2.41
92 93 0.036732 ACCCATGTGCACGATCTTGT 59.963 50.000 13.13 1.53 0.00 3.16
93 94 2.022764 TACCCATGTGCACGATCTTG 57.977 50.000 13.13 4.62 0.00 3.02
94 95 2.027192 ACTTACCCATGTGCACGATCTT 60.027 45.455 13.13 0.00 0.00 2.40
95 96 1.555075 ACTTACCCATGTGCACGATCT 59.445 47.619 13.13 0.00 0.00 2.75
96 97 1.933853 GACTTACCCATGTGCACGATC 59.066 52.381 13.13 0.00 0.00 3.69
97 98 1.739035 CGACTTACCCATGTGCACGAT 60.739 52.381 13.13 4.14 0.00 3.73
98 99 0.389296 CGACTTACCCATGTGCACGA 60.389 55.000 13.13 1.58 0.00 4.35
99 100 0.389296 TCGACTTACCCATGTGCACG 60.389 55.000 13.13 0.00 0.00 5.34
100 101 1.067142 TCTCGACTTACCCATGTGCAC 60.067 52.381 10.75 10.75 0.00 4.57
101 102 1.204704 CTCTCGACTTACCCATGTGCA 59.795 52.381 0.00 0.00 0.00 4.57
102 103 1.204941 ACTCTCGACTTACCCATGTGC 59.795 52.381 0.00 0.00 0.00 4.57
103 104 4.920640 ATACTCTCGACTTACCCATGTG 57.079 45.455 0.00 0.00 0.00 3.21
104 105 5.934402 AAATACTCTCGACTTACCCATGT 57.066 39.130 0.00 0.00 0.00 3.21
105 106 5.523916 CCAAAATACTCTCGACTTACCCATG 59.476 44.000 0.00 0.00 0.00 3.66
106 107 5.396436 CCCAAAATACTCTCGACTTACCCAT 60.396 44.000 0.00 0.00 0.00 4.00
107 108 4.081309 CCCAAAATACTCTCGACTTACCCA 60.081 45.833 0.00 0.00 0.00 4.51
108 109 4.081254 ACCCAAAATACTCTCGACTTACCC 60.081 45.833 0.00 0.00 0.00 3.69
109 110 5.082251 ACCCAAAATACTCTCGACTTACC 57.918 43.478 0.00 0.00 0.00 2.85
110 111 4.797349 CGACCCAAAATACTCTCGACTTAC 59.203 45.833 0.00 0.00 0.00 2.34
111 112 4.701651 TCGACCCAAAATACTCTCGACTTA 59.298 41.667 0.00 0.00 0.00 2.24
112 113 3.508793 TCGACCCAAAATACTCTCGACTT 59.491 43.478 0.00 0.00 0.00 3.01
113 114 3.087031 TCGACCCAAAATACTCTCGACT 58.913 45.455 0.00 0.00 0.00 4.18
114 115 3.436496 CTCGACCCAAAATACTCTCGAC 58.564 50.000 0.00 0.00 0.00 4.20
115 116 2.426024 CCTCGACCCAAAATACTCTCGA 59.574 50.000 0.00 0.00 0.00 4.04
116 117 2.165845 ACCTCGACCCAAAATACTCTCG 59.834 50.000 0.00 0.00 0.00 4.04
117 118 3.889520 ACCTCGACCCAAAATACTCTC 57.110 47.619 0.00 0.00 0.00 3.20
118 119 4.382793 GCTAACCTCGACCCAAAATACTCT 60.383 45.833 0.00 0.00 0.00 3.24
119 120 3.869832 GCTAACCTCGACCCAAAATACTC 59.130 47.826 0.00 0.00 0.00 2.59
120 121 3.677976 CGCTAACCTCGACCCAAAATACT 60.678 47.826 0.00 0.00 0.00 2.12
121 122 2.606272 CGCTAACCTCGACCCAAAATAC 59.394 50.000 0.00 0.00 0.00 1.89
122 123 2.419021 CCGCTAACCTCGACCCAAAATA 60.419 50.000 0.00 0.00 0.00 1.40
123 124 1.677820 CCGCTAACCTCGACCCAAAAT 60.678 52.381 0.00 0.00 0.00 1.82
124 125 0.320946 CCGCTAACCTCGACCCAAAA 60.321 55.000 0.00 0.00 0.00 2.44
125 126 1.294138 CCGCTAACCTCGACCCAAA 59.706 57.895 0.00 0.00 0.00 3.28
126 127 2.975536 CCGCTAACCTCGACCCAA 59.024 61.111 0.00 0.00 0.00 4.12
127 128 2.842188 TAGCCGCTAACCTCGACCCA 62.842 60.000 0.00 0.00 0.00 4.51
128 129 2.123428 TAGCCGCTAACCTCGACCC 61.123 63.158 0.00 0.00 0.00 4.46
129 130 1.065436 GTAGCCGCTAACCTCGACC 59.935 63.158 0.46 0.00 0.00 4.79
130 131 1.298190 CGTAGCCGCTAACCTCGAC 60.298 63.158 0.46 0.00 0.00 4.20
131 132 1.308069 AACGTAGCCGCTAACCTCGA 61.308 55.000 13.32 0.00 37.70 4.04
132 133 0.378257 TAACGTAGCCGCTAACCTCG 59.622 55.000 0.46 4.19 37.70 4.63
133 134 1.863219 GCTAACGTAGCCGCTAACCTC 60.863 57.143 0.46 0.00 45.95 3.85
134 135 0.101939 GCTAACGTAGCCGCTAACCT 59.898 55.000 0.46 0.00 45.95 3.50
135 136 2.586418 GCTAACGTAGCCGCTAACC 58.414 57.895 0.46 0.00 45.95 2.85
144 145 7.368833 AGCTACTTTACCATATGCTAACGTAG 58.631 38.462 20.15 20.15 32.09 3.51
145 146 7.281040 AGCTACTTTACCATATGCTAACGTA 57.719 36.000 0.00 2.56 0.00 3.57
146 147 6.158023 AGCTACTTTACCATATGCTAACGT 57.842 37.500 0.00 1.46 0.00 3.99
147 148 8.758633 ATTAGCTACTTTACCATATGCTAACG 57.241 34.615 0.00 0.00 41.96 3.18
150 151 9.929180 CAGAATTAGCTACTTTACCATATGCTA 57.071 33.333 0.00 0.00 0.00 3.49
151 152 8.432805 ACAGAATTAGCTACTTTACCATATGCT 58.567 33.333 0.00 0.00 0.00 3.79
152 153 8.608844 ACAGAATTAGCTACTTTACCATATGC 57.391 34.615 0.00 0.00 0.00 3.14
157 158 9.953565 AATGTAACAGAATTAGCTACTTTACCA 57.046 29.630 0.00 0.00 0.00 3.25
178 179 9.555727 GGCCTTATCTGTCATTTAGTAAATGTA 57.444 33.333 27.04 18.90 46.46 2.29
179 180 8.275040 AGGCCTTATCTGTCATTTAGTAAATGT 58.725 33.333 27.04 14.97 46.46 2.71
182 183 9.609346 GTTAGGCCTTATCTGTCATTTAGTAAA 57.391 33.333 12.58 0.00 0.00 2.01
183 184 8.989131 AGTTAGGCCTTATCTGTCATTTAGTAA 58.011 33.333 12.58 0.00 0.00 2.24
184 185 8.548880 AGTTAGGCCTTATCTGTCATTTAGTA 57.451 34.615 12.58 0.00 0.00 1.82
185 186 7.439108 AGTTAGGCCTTATCTGTCATTTAGT 57.561 36.000 12.58 0.00 0.00 2.24
191 192 9.832445 CTTTTAATAGTTAGGCCTTATCTGTCA 57.168 33.333 12.58 0.00 0.00 3.58
192 193 9.274206 CCTTTTAATAGTTAGGCCTTATCTGTC 57.726 37.037 12.58 0.00 0.00 3.51
193 194 8.779031 ACCTTTTAATAGTTAGGCCTTATCTGT 58.221 33.333 12.58 2.56 0.00 3.41
194 195 9.628500 AACCTTTTAATAGTTAGGCCTTATCTG 57.372 33.333 12.58 0.00 0.00 2.90
200 201 9.896645 GTACTAAACCTTTTAATAGTTAGGCCT 57.103 33.333 11.78 11.78 31.46 5.19
201 202 9.671279 TGTACTAAACCTTTTAATAGTTAGGCC 57.329 33.333 0.00 0.00 31.46 5.19
211 212 8.444715 CGCATACATGTGTACTAAACCTTTTAA 58.555 33.333 9.11 0.00 32.72 1.52
212 213 7.064847 CCGCATACATGTGTACTAAACCTTTTA 59.935 37.037 9.11 0.00 36.60 1.52
213 214 6.128117 CCGCATACATGTGTACTAAACCTTTT 60.128 38.462 9.11 0.00 36.60 2.27
214 215 5.353123 CCGCATACATGTGTACTAAACCTTT 59.647 40.000 9.11 0.00 36.60 3.11
215 216 4.873827 CCGCATACATGTGTACTAAACCTT 59.126 41.667 9.11 0.00 36.60 3.50
216 217 4.081309 ACCGCATACATGTGTACTAAACCT 60.081 41.667 9.11 0.00 36.60 3.50
217 218 4.186159 ACCGCATACATGTGTACTAAACC 58.814 43.478 9.11 0.00 36.60 3.27
218 219 5.052172 CGTACCGCATACATGTGTACTAAAC 60.052 44.000 9.11 0.00 36.69 2.01
219 220 5.036090 CGTACCGCATACATGTGTACTAAA 58.964 41.667 9.11 0.00 36.69 1.85
220 221 4.600032 CGTACCGCATACATGTGTACTAA 58.400 43.478 9.11 0.00 36.69 2.24
221 222 4.213596 CGTACCGCATACATGTGTACTA 57.786 45.455 9.11 0.00 36.69 1.82
222 223 3.074504 CGTACCGCATACATGTGTACT 57.925 47.619 9.11 0.00 36.69 2.73
236 237 3.223953 CAATACTCATACTCGCGTACCG 58.776 50.000 5.77 0.00 38.61 4.02
237 238 3.973135 CACAATACTCATACTCGCGTACC 59.027 47.826 5.77 0.00 0.00 3.34
238 239 4.595116 ACACAATACTCATACTCGCGTAC 58.405 43.478 5.77 0.00 0.00 3.67
239 240 4.333372 TGACACAATACTCATACTCGCGTA 59.667 41.667 5.77 0.00 0.00 4.42
240 241 3.128068 TGACACAATACTCATACTCGCGT 59.872 43.478 5.77 0.00 0.00 6.01
241 242 3.691498 TGACACAATACTCATACTCGCG 58.309 45.455 0.00 0.00 0.00 5.87
242 243 5.629849 GGTATGACACAATACTCATACTCGC 59.370 44.000 14.39 0.00 44.62 5.03
243 244 6.150318 GGGTATGACACAATACTCATACTCG 58.850 44.000 14.39 0.00 44.62 4.18
244 245 6.150318 CGGGTATGACACAATACTCATACTC 58.850 44.000 14.39 11.06 44.62 2.59
245 246 5.010719 CCGGGTATGACACAATACTCATACT 59.989 44.000 14.39 0.00 44.62 2.12
246 247 5.227908 CCGGGTATGACACAATACTCATAC 58.772 45.833 8.64 8.64 44.55 2.39
247 248 4.262292 GCCGGGTATGACACAATACTCATA 60.262 45.833 2.18 0.00 33.75 2.15
248 249 3.494398 GCCGGGTATGACACAATACTCAT 60.494 47.826 2.18 0.00 33.75 2.90
249 250 2.159014 GCCGGGTATGACACAATACTCA 60.159 50.000 2.18 0.00 33.75 3.41
250 251 2.102588 AGCCGGGTATGACACAATACTC 59.897 50.000 3.10 0.00 34.14 2.59
251 252 2.116238 AGCCGGGTATGACACAATACT 58.884 47.619 3.10 0.00 34.14 2.12
252 253 2.614829 AGCCGGGTATGACACAATAC 57.385 50.000 3.10 0.00 33.10 1.89
253 254 4.967084 ATAAGCCGGGTATGACACAATA 57.033 40.909 6.57 0.00 0.00 1.90
254 255 3.857157 ATAAGCCGGGTATGACACAAT 57.143 42.857 6.57 0.00 0.00 2.71
255 256 4.757019 TTATAAGCCGGGTATGACACAA 57.243 40.909 6.57 0.00 0.00 3.33
256 257 4.162698 AGTTTATAAGCCGGGTATGACACA 59.837 41.667 6.57 0.00 0.00 3.72
257 258 4.700700 AGTTTATAAGCCGGGTATGACAC 58.299 43.478 6.57 1.47 0.00 3.67
258 259 4.500205 CGAGTTTATAAGCCGGGTATGACA 60.500 45.833 6.57 0.00 0.00 3.58
259 260 3.985925 CGAGTTTATAAGCCGGGTATGAC 59.014 47.826 6.57 1.88 0.00 3.06
260 261 3.638160 ACGAGTTTATAAGCCGGGTATGA 59.362 43.478 6.57 0.00 0.00 2.15
261 262 3.739300 CACGAGTTTATAAGCCGGGTATG 59.261 47.826 6.57 0.00 0.00 2.39
262 263 3.243975 CCACGAGTTTATAAGCCGGGTAT 60.244 47.826 6.57 3.65 0.00 2.73
263 264 2.101249 CCACGAGTTTATAAGCCGGGTA 59.899 50.000 6.57 0.00 0.00 3.69
264 265 1.134610 CCACGAGTTTATAAGCCGGGT 60.135 52.381 0.00 0.00 0.00 5.28
265 266 1.137479 TCCACGAGTTTATAAGCCGGG 59.863 52.381 2.18 9.18 0.00 5.73
266 267 2.589798 TCCACGAGTTTATAAGCCGG 57.410 50.000 0.00 0.00 0.00 6.13
267 268 4.868067 AGTATCCACGAGTTTATAAGCCG 58.132 43.478 0.00 8.06 0.00 5.52
268 269 6.644181 GGTAAGTATCCACGAGTTTATAAGCC 59.356 42.308 0.00 0.00 0.00 4.35
269 270 7.432059 AGGTAAGTATCCACGAGTTTATAAGC 58.568 38.462 0.00 0.00 0.00 3.09
270 271 9.813446 AAAGGTAAGTATCCACGAGTTTATAAG 57.187 33.333 0.00 0.00 0.00 1.73
281 282 7.400439 AGGGTTTAGAAAAGGTAAGTATCCAC 58.600 38.462 0.00 0.00 0.00 4.02
288 289 5.888901 AGGGAAGGGTTTAGAAAAGGTAAG 58.111 41.667 0.00 0.00 0.00 2.34
292 293 7.061054 CCTATTAGGGAAGGGTTTAGAAAAGG 58.939 42.308 1.37 0.00 0.00 3.11
329 330 0.184933 CCCACAACCAAGGAACCTGA 59.815 55.000 0.00 0.00 0.00 3.86
331 332 1.525175 TACCCACAACCAAGGAACCT 58.475 50.000 0.00 0.00 0.00 3.50
333 334 3.025262 TGTTTACCCACAACCAAGGAAC 58.975 45.455 0.00 0.00 0.00 3.62
338 339 2.103263 GGCAATGTTTACCCACAACCAA 59.897 45.455 0.00 0.00 0.00 3.67
339 340 1.689273 GGCAATGTTTACCCACAACCA 59.311 47.619 0.00 0.00 0.00 3.67
353 354 1.108776 CTCCCCTCAACATGGCAATG 58.891 55.000 0.00 0.00 39.89 2.82
376 377 1.890041 CAGGCCGGTGTTTCGTGAA 60.890 57.895 1.90 0.00 0.00 3.18
400 401 5.048846 AGATGGAGGGCGTATTATTTTGT 57.951 39.130 0.00 0.00 0.00 2.83
512 513 2.967599 ATATGAGCGCTTGTGTCTGA 57.032 45.000 13.26 0.00 0.00 3.27
515 516 4.578601 GTGTAAATATGAGCGCTTGTGTC 58.421 43.478 13.26 0.00 0.00 3.67
522 523 1.326245 TGTGCGTGTAAATATGAGCGC 59.674 47.619 0.00 0.00 44.29 5.92
535 536 4.180817 TCATAGGAATAAGTGTGTGCGTG 58.819 43.478 0.00 0.00 0.00 5.34
536 537 4.465632 TCATAGGAATAAGTGTGTGCGT 57.534 40.909 0.00 0.00 0.00 5.24
549 550 2.535012 TGTGTGTGCGTTCATAGGAA 57.465 45.000 0.00 0.00 0.00 3.36
550 551 2.760634 ATGTGTGTGCGTTCATAGGA 57.239 45.000 0.00 0.00 0.00 2.94
551 552 3.062099 GTGTATGTGTGTGCGTTCATAGG 59.938 47.826 0.00 0.00 0.00 2.57
556 557 1.459592 GAGGTGTATGTGTGTGCGTTC 59.540 52.381 0.00 0.00 0.00 3.95
561 562 0.035439 GGGGGAGGTGTATGTGTGTG 60.035 60.000 0.00 0.00 0.00 3.82
577 578 1.048724 TCGAAGGTGCTCATAGGGGG 61.049 60.000 0.00 0.00 0.00 5.40
585 586 2.481104 CCTCAATCTCTCGAAGGTGCTC 60.481 54.545 0.00 0.00 0.00 4.26
587 588 1.933247 CCTCAATCTCTCGAAGGTGC 58.067 55.000 0.00 0.00 0.00 5.01
618 619 8.398665 GCCTATGGTGACTTTGTAAATCTTAAG 58.601 37.037 0.00 0.00 0.00 1.85
621 622 5.354234 CGCCTATGGTGACTTTGTAAATCTT 59.646 40.000 0.00 0.00 34.74 2.40
635 636 1.402456 GGCTACGATACGCCTATGGTG 60.402 57.143 0.00 0.00 42.98 4.17
650 651 2.103263 AGGAGACATTTCCATCGGCTAC 59.897 50.000 0.00 0.00 39.84 3.58
656 657 4.201822 GCACGTTTAGGAGACATTTCCATC 60.202 45.833 0.00 0.00 39.84 3.51
658 659 3.071479 GCACGTTTAGGAGACATTTCCA 58.929 45.455 0.00 0.00 39.84 3.53
659 660 3.071479 TGCACGTTTAGGAGACATTTCC 58.929 45.455 0.00 0.00 37.52 3.13
661 662 3.370978 CGATGCACGTTTAGGAGACATTT 59.629 43.478 0.00 0.00 37.22 2.32
677 684 5.823209 ATTTCATGATCTTTGACGATGCA 57.177 34.783 0.00 0.00 0.00 3.96
720 727 3.364460 CCACCAGGGTACAAATCATGA 57.636 47.619 0.00 0.00 0.00 3.07
733 740 4.039092 CTCAGCCCACCCACCAGG 62.039 72.222 0.00 0.00 43.78 4.45
737 744 1.271840 TGGTATCTCAGCCCACCCAC 61.272 60.000 0.00 0.00 0.00 4.61
742 749 1.195115 GACAGTGGTATCTCAGCCCA 58.805 55.000 0.00 0.00 0.00 5.36
743 750 0.466124 GGACAGTGGTATCTCAGCCC 59.534 60.000 0.00 0.00 0.00 5.19
744 751 0.466124 GGGACAGTGGTATCTCAGCC 59.534 60.000 0.00 0.00 0.00 4.85
745 752 1.137872 CAGGGACAGTGGTATCTCAGC 59.862 57.143 0.00 0.00 0.00 4.26
787 794 0.316841 TTCCCTTGGTCGCAAAATGC 59.683 50.000 0.00 0.00 40.69 3.56
791 798 3.644966 ATCTATTCCCTTGGTCGCAAA 57.355 42.857 0.00 0.00 0.00 3.68
838 845 5.632244 TTTATTTTCGAGTAACTTGGCCC 57.368 39.130 0.00 0.00 0.00 5.80
870 877 2.292845 GCCGCGATTACTAACTAGGAGT 59.707 50.000 8.23 5.08 0.00 3.85
871 878 2.351544 GGCCGCGATTACTAACTAGGAG 60.352 54.545 8.23 0.00 0.00 3.69
872 879 1.610522 GGCCGCGATTACTAACTAGGA 59.389 52.381 8.23 0.00 0.00 2.94
873 880 1.338973 TGGCCGCGATTACTAACTAGG 59.661 52.381 8.23 0.00 0.00 3.02
874 881 2.391879 GTGGCCGCGATTACTAACTAG 58.608 52.381 8.23 0.00 0.00 2.57
966 976 1.135333 CTTGCTCTTACTCTCCGTCCC 59.865 57.143 0.00 0.00 0.00 4.46
969 979 1.067495 GCACTTGCTCTTACTCTCCGT 60.067 52.381 0.00 0.00 38.21 4.69
977 987 0.670546 GGCAGACGCACTTGCTCTTA 60.671 55.000 0.00 0.00 41.24 2.10
1272 1297 5.129485 GGTCCTCACCTTAGAGATGATTTCA 59.871 44.000 0.00 0.00 40.00 2.69
1391 3503 2.095718 CGGTACTGAAAGCAAAGGAAGC 60.096 50.000 0.00 0.00 37.60 3.86
1667 3785 1.194121 TGCAGAGGGTAAGCAGCAGA 61.194 55.000 0.00 0.00 33.75 4.26
1737 3855 6.611236 CCCTCTTTCTCTTCCTCTTTCTATCT 59.389 42.308 0.00 0.00 0.00 1.98
1788 3957 0.951040 CCGGCTTCCACTCAACAGAC 60.951 60.000 0.00 0.00 0.00 3.51
1848 4020 1.519719 GATCTTGCCGAGGAGCAGT 59.480 57.895 0.00 0.00 45.13 4.40
2203 4383 3.997021 CCAGACTGTTGTACCATCTCAAC 59.003 47.826 0.93 0.00 42.62 3.18
2400 4580 5.127682 AGGTGAAGATTTTGACACAAGCTTT 59.872 36.000 6.32 0.00 30.06 3.51
2534 4714 3.429547 CCTGACATAGAACTCTTGGTCGG 60.430 52.174 10.24 10.24 35.63 4.79
2535 4715 3.444034 TCCTGACATAGAACTCTTGGTCG 59.556 47.826 0.00 0.00 33.36 4.79
2536 4716 5.407407 TTCCTGACATAGAACTCTTGGTC 57.593 43.478 0.00 0.00 0.00 4.02
2567 4747 3.963665 TGAGAAAACTTGTTCAATGCGG 58.036 40.909 0.00 0.00 0.00 5.69
2568 4748 3.423206 GCTGAGAAAACTTGTTCAATGCG 59.577 43.478 0.00 0.00 0.00 4.73
2577 4757 3.491447 CCCCTGTTTGCTGAGAAAACTTG 60.491 47.826 16.50 9.45 38.17 3.16
2580 4760 2.031870 ACCCCTGTTTGCTGAGAAAAC 58.968 47.619 9.14 9.14 37.90 2.43
2581 4761 2.430332 CAACCCCTGTTTGCTGAGAAAA 59.570 45.455 0.00 0.00 30.42 2.29
2582 4762 2.031120 CAACCCCTGTTTGCTGAGAAA 58.969 47.619 0.00 0.00 30.42 2.52
2583 4763 1.691196 CAACCCCTGTTTGCTGAGAA 58.309 50.000 0.00 0.00 30.42 2.87
2664 4844 0.112995 AGGGCAGCAGAAATGGTTGA 59.887 50.000 0.00 0.00 0.00 3.18
2735 4915 8.086522 TGTACAGATAAGTAGTTGAACCTTCAC 58.913 37.037 0.00 0.00 36.83 3.18
2790 4970 3.826524 TGGTGTTGCCAAGAAGTTGATA 58.173 40.909 0.00 0.00 45.94 2.15
2877 5057 2.544694 CGATGGTCTTTCCTCCTCATCG 60.545 54.545 8.70 8.70 44.59 3.84
2888 5068 1.001378 GCAAGCACAACGATGGTCTTT 60.001 47.619 0.00 0.00 0.00 2.52
3089 5269 2.930040 CAACCTACATACAGCAGAACGG 59.070 50.000 0.00 0.00 0.00 4.44
3235 5415 1.202855 AGCTGCACTTCCAACAGACAT 60.203 47.619 1.02 0.00 33.10 3.06
3237 5417 0.590195 CAGCTGCACTTCCAACAGAC 59.410 55.000 0.00 0.00 33.10 3.51
3243 5423 0.607217 CCATCACAGCTGCACTTCCA 60.607 55.000 15.27 0.00 0.00 3.53
3332 5512 3.880591 GCAGCGAGCTGTCATTGA 58.119 55.556 23.79 0.00 45.24 2.57
3475 5655 0.982673 CGACTTGAAACTCGTAGCGG 59.017 55.000 0.00 0.00 0.00 5.52
3750 6202 5.803552 AGCTCCCATTCTATCAAATCTAGC 58.196 41.667 0.00 0.00 0.00 3.42
3865 6317 5.540337 ACTCTGACAGAAATCTTCAGTGGTA 59.460 40.000 6.61 6.05 38.35 3.25
3899 6351 2.341257 CTTGTCCGACATTGTCTCAGG 58.659 52.381 14.54 8.73 0.00 3.86
3904 6356 0.166814 GCTGCTTGTCCGACATTGTC 59.833 55.000 6.73 6.73 0.00 3.18
3931 6383 6.091718 TCCAAGTAAAGCAAATTTGTACCC 57.908 37.500 19.03 2.94 32.01 3.69
3932 6384 8.088365 AGATTCCAAGTAAAGCAAATTTGTACC 58.912 33.333 19.03 3.29 32.01 3.34
4002 9691 4.941713 AGGCCTACAACCATTTTCCATTA 58.058 39.130 1.29 0.00 0.00 1.90
4152 9842 4.655762 TGATACTCTCATCCTTTGACGG 57.344 45.455 0.00 0.00 0.00 4.79
4206 9897 0.741326 CCGTCTGAGACACCGATGAT 59.259 55.000 13.67 0.00 32.09 2.45
4207 9898 0.322187 TCCGTCTGAGACACCGATGA 60.322 55.000 13.67 0.00 32.09 2.92
4208 9899 0.099613 CTCCGTCTGAGACACCGATG 59.900 60.000 13.67 0.00 44.42 3.84
4275 9966 1.348036 AGTTAGCCCAGGTTGACTCAC 59.652 52.381 0.00 0.00 0.00 3.51
4287 9978 1.541588 CAACTTGCAAGGAGTTAGCCC 59.458 52.381 29.18 0.00 35.68 5.19
4323 10014 4.256920 AGCACCAGTGATGTAATTGACTC 58.743 43.478 0.99 0.00 0.00 3.36
4324 10015 4.292186 AGCACCAGTGATGTAATTGACT 57.708 40.909 0.99 0.00 0.00 3.41
4325 10016 5.419542 TCTAGCACCAGTGATGTAATTGAC 58.580 41.667 0.99 0.00 0.00 3.18
4326 10017 5.675684 TCTAGCACCAGTGATGTAATTGA 57.324 39.130 0.99 0.00 0.00 2.57
4327 10018 5.877012 AGTTCTAGCACCAGTGATGTAATTG 59.123 40.000 0.99 0.00 0.00 2.32
4328 10019 6.054860 AGTTCTAGCACCAGTGATGTAATT 57.945 37.500 0.99 0.00 0.00 1.40
4329 10020 5.683876 AGTTCTAGCACCAGTGATGTAAT 57.316 39.130 0.99 0.00 0.00 1.89
4330 10021 5.237815 CAAGTTCTAGCACCAGTGATGTAA 58.762 41.667 0.99 0.00 0.00 2.41
4331 10022 4.322725 CCAAGTTCTAGCACCAGTGATGTA 60.323 45.833 0.99 0.00 0.00 2.29
4332 10023 3.557898 CCAAGTTCTAGCACCAGTGATGT 60.558 47.826 0.99 0.00 0.00 3.06
4333 10024 3.005554 CCAAGTTCTAGCACCAGTGATG 58.994 50.000 0.99 0.00 0.00 3.07
4334 10025 2.639839 ACCAAGTTCTAGCACCAGTGAT 59.360 45.455 0.99 0.00 0.00 3.06
4335 10026 2.047061 ACCAAGTTCTAGCACCAGTGA 58.953 47.619 0.99 0.00 0.00 3.41
4336 10027 2.550830 ACCAAGTTCTAGCACCAGTG 57.449 50.000 0.00 0.00 0.00 3.66
4337 10028 2.969950 TGTACCAAGTTCTAGCACCAGT 59.030 45.455 0.00 0.00 0.00 4.00
4338 10029 3.258372 TCTGTACCAAGTTCTAGCACCAG 59.742 47.826 0.00 0.00 0.00 4.00
4339 10030 3.236047 TCTGTACCAAGTTCTAGCACCA 58.764 45.455 0.00 0.00 0.00 4.17
4340 10031 3.955650 TCTGTACCAAGTTCTAGCACC 57.044 47.619 0.00 0.00 0.00 5.01
4341 10032 4.865365 GTCATCTGTACCAAGTTCTAGCAC 59.135 45.833 0.00 0.00 0.00 4.40
4342 10033 4.081642 GGTCATCTGTACCAAGTTCTAGCA 60.082 45.833 0.00 0.00 36.96 3.49
4343 10034 4.081642 TGGTCATCTGTACCAAGTTCTAGC 60.082 45.833 0.00 0.00 43.99 3.42
4344 10035 5.661056 TGGTCATCTGTACCAAGTTCTAG 57.339 43.478 0.00 0.00 43.99 2.43
4352 10043 3.417069 CCAAAGTGGTCATCTGTACCA 57.583 47.619 0.00 0.00 44.75 3.25
4364 10055 3.003689 CACAAGTTCTAGCACCAAAGTGG 59.996 47.826 0.00 0.00 44.69 4.00
4366 10057 3.214328 CCACAAGTTCTAGCACCAAAGT 58.786 45.455 0.00 0.00 0.00 2.66
4367 10058 3.003689 CACCACAAGTTCTAGCACCAAAG 59.996 47.826 0.00 0.00 0.00 2.77
4368 10059 2.948979 CACCACAAGTTCTAGCACCAAA 59.051 45.455 0.00 0.00 0.00 3.28
4369 10060 2.092646 ACACCACAAGTTCTAGCACCAA 60.093 45.455 0.00 0.00 0.00 3.67
4370 10061 1.488812 ACACCACAAGTTCTAGCACCA 59.511 47.619 0.00 0.00 0.00 4.17
4371 10062 2.256117 ACACCACAAGTTCTAGCACC 57.744 50.000 0.00 0.00 0.00 5.01
4372 10063 3.724374 TGTACACCACAAGTTCTAGCAC 58.276 45.455 0.00 0.00 32.95 4.40
4373 10064 4.617253 ATGTACACCACAAGTTCTAGCA 57.383 40.909 0.00 0.00 41.55 3.49
4374 10065 7.980099 ACTTATATGTACACCACAAGTTCTAGC 59.020 37.037 0.00 0.00 41.55 3.42
4375 10066 9.302345 CACTTATATGTACACCACAAGTTCTAG 57.698 37.037 0.00 0.00 41.55 2.43
4376 10067 9.027202 TCACTTATATGTACACCACAAGTTCTA 57.973 33.333 0.00 0.00 41.55 2.10
4377 10068 7.903145 TCACTTATATGTACACCACAAGTTCT 58.097 34.615 0.00 0.00 41.55 3.01
4378 10069 8.718102 ATCACTTATATGTACACCACAAGTTC 57.282 34.615 0.00 0.00 41.55 3.01
4379 10070 9.162764 GAATCACTTATATGTACACCACAAGTT 57.837 33.333 0.00 0.00 41.55 2.66
4380 10071 8.318412 TGAATCACTTATATGTACACCACAAGT 58.682 33.333 0.00 3.00 41.55 3.16
4381 10072 8.716646 TGAATCACTTATATGTACACCACAAG 57.283 34.615 0.00 2.34 41.55 3.16
4382 10073 9.161629 CTTGAATCACTTATATGTACACCACAA 57.838 33.333 0.00 0.00 41.55 3.33
4383 10074 8.536175 TCTTGAATCACTTATATGTACACCACA 58.464 33.333 0.00 0.00 42.69 4.17
4384 10075 8.942338 TCTTGAATCACTTATATGTACACCAC 57.058 34.615 0.00 0.00 0.00 4.16
4385 10076 9.378551 GTTCTTGAATCACTTATATGTACACCA 57.621 33.333 0.00 0.00 0.00 4.17
4386 10077 9.601217 AGTTCTTGAATCACTTATATGTACACC 57.399 33.333 0.00 0.00 0.00 4.16
4390 10081 9.109393 GCCAAGTTCTTGAATCACTTATATGTA 57.891 33.333 13.29 0.00 0.00 2.29
4391 10082 7.831193 AGCCAAGTTCTTGAATCACTTATATGT 59.169 33.333 13.29 0.00 0.00 2.29
4392 10083 8.218338 AGCCAAGTTCTTGAATCACTTATATG 57.782 34.615 13.29 0.00 0.00 1.78
4393 10084 8.680903 CAAGCCAAGTTCTTGAATCACTTATAT 58.319 33.333 13.29 0.00 42.52 0.86
4394 10085 7.882791 TCAAGCCAAGTTCTTGAATCACTTATA 59.117 33.333 13.29 0.97 44.70 0.98
4395 10086 6.716628 TCAAGCCAAGTTCTTGAATCACTTAT 59.283 34.615 13.29 0.00 44.70 1.73
4396 10087 6.061441 TCAAGCCAAGTTCTTGAATCACTTA 58.939 36.000 13.29 0.00 44.70 2.24
4397 10088 4.889409 TCAAGCCAAGTTCTTGAATCACTT 59.111 37.500 13.29 6.55 44.70 3.16
4398 10089 4.464008 TCAAGCCAAGTTCTTGAATCACT 58.536 39.130 13.29 1.58 44.70 3.41
4399 10090 4.836125 TCAAGCCAAGTTCTTGAATCAC 57.164 40.909 13.29 0.00 44.70 3.06
4404 10095 1.134220 ACCGTCAAGCCAAGTTCTTGA 60.134 47.619 13.29 3.51 45.25 3.02
4405 10096 1.002468 CACCGTCAAGCCAAGTTCTTG 60.002 52.381 5.66 5.66 41.57 3.02
4406 10097 1.308998 CACCGTCAAGCCAAGTTCTT 58.691 50.000 0.00 0.00 0.00 2.52
4407 10098 1.166531 GCACCGTCAAGCCAAGTTCT 61.167 55.000 0.00 0.00 0.00 3.01
4408 10099 1.282875 GCACCGTCAAGCCAAGTTC 59.717 57.895 0.00 0.00 0.00 3.01
4409 10100 1.034838 TTGCACCGTCAAGCCAAGTT 61.035 50.000 0.00 0.00 0.00 2.66
4410 10101 1.034838 TTTGCACCGTCAAGCCAAGT 61.035 50.000 0.00 0.00 0.00 3.16
4411 10102 0.314935 ATTTGCACCGTCAAGCCAAG 59.685 50.000 0.00 0.00 0.00 3.61
4412 10103 1.268352 GTATTTGCACCGTCAAGCCAA 59.732 47.619 0.00 0.00 0.00 4.52
4413 10104 0.878416 GTATTTGCACCGTCAAGCCA 59.122 50.000 0.00 0.00 0.00 4.75
4414 10105 0.179200 CGTATTTGCACCGTCAAGCC 60.179 55.000 0.00 0.00 0.00 4.35
4415 10106 0.793861 TCGTATTTGCACCGTCAAGC 59.206 50.000 0.00 0.00 0.00 4.01
4416 10107 2.415168 ACATCGTATTTGCACCGTCAAG 59.585 45.455 0.00 0.00 0.00 3.02
4417 10108 2.418692 ACATCGTATTTGCACCGTCAA 58.581 42.857 0.00 0.00 0.00 3.18
4418 10109 2.087501 ACATCGTATTTGCACCGTCA 57.912 45.000 0.00 0.00 0.00 4.35
4419 10110 2.769376 CAACATCGTATTTGCACCGTC 58.231 47.619 0.00 0.00 0.00 4.79
4420 10111 1.135803 GCAACATCGTATTTGCACCGT 60.136 47.619 11.13 0.00 46.13 4.83
4421 10112 1.534028 GCAACATCGTATTTGCACCG 58.466 50.000 11.13 0.00 46.13 4.94
4425 10116 2.713976 GCGTATGCAACATCGTATTTGC 59.286 45.455 0.89 9.65 46.88 3.68
4426 10117 3.002246 AGGCGTATGCAACATCGTATTTG 59.998 43.478 9.59 0.00 45.35 2.32
4427 10118 3.202906 AGGCGTATGCAACATCGTATTT 58.797 40.909 9.59 0.00 45.35 1.40
4428 10119 2.833794 AGGCGTATGCAACATCGTATT 58.166 42.857 9.59 0.00 45.35 1.89
4429 10120 2.526304 AGGCGTATGCAACATCGTAT 57.474 45.000 9.59 0.00 45.35 3.06
4430 10121 2.198406 GAAGGCGTATGCAACATCGTA 58.802 47.619 9.59 0.00 45.35 3.43
4431 10122 1.006832 GAAGGCGTATGCAACATCGT 58.993 50.000 9.59 0.00 45.35 3.73
4432 10123 0.043053 CGAAGGCGTATGCAACATCG 60.043 55.000 9.59 8.61 45.35 3.84
4433 10124 0.304705 CCGAAGGCGTATGCAACATC 59.695 55.000 9.59 0.26 46.14 3.06
4434 10125 2.393557 CCGAAGGCGTATGCAACAT 58.606 52.632 9.59 0.00 46.14 2.71
4435 10126 3.883462 CCGAAGGCGTATGCAACA 58.117 55.556 9.59 0.00 46.14 3.33
4447 10138 2.583593 GCCTAGTCAGCGCCGAAG 60.584 66.667 2.29 0.00 0.00 3.79
4448 10139 2.721167 ATGCCTAGTCAGCGCCGAA 61.721 57.895 2.29 0.00 0.00 4.30
4449 10140 3.147595 ATGCCTAGTCAGCGCCGA 61.148 61.111 2.29 0.00 0.00 5.54
4450 10141 2.963854 CATGCCTAGTCAGCGCCG 60.964 66.667 2.29 0.00 0.00 6.46
4451 10142 3.275338 GCATGCCTAGTCAGCGCC 61.275 66.667 6.36 0.00 0.00 6.53
4452 10143 3.275338 GGCATGCCTAGTCAGCGC 61.275 66.667 29.98 0.00 0.00 5.92
4453 10144 1.886313 CTGGCATGCCTAGTCAGCG 60.886 63.158 35.53 11.04 36.94 5.18
4454 10145 2.185494 GCTGGCATGCCTAGTCAGC 61.185 63.158 35.53 29.85 42.89 4.26
4455 10146 0.179026 ATGCTGGCATGCCTAGTCAG 60.179 55.000 35.53 24.86 35.03 3.51
4456 10147 0.464916 CATGCTGGCATGCCTAGTCA 60.465 55.000 35.53 27.14 45.71 3.41
4457 10148 2.328235 CATGCTGGCATGCCTAGTC 58.672 57.895 35.53 23.55 45.71 2.59
4458 10149 4.573210 CATGCTGGCATGCCTAGT 57.427 55.556 35.53 17.15 45.71 2.57
4465 10156 2.124570 GTCCCGTCATGCTGGCAT 60.125 61.111 1.86 1.86 37.08 4.40
4466 10157 4.408821 GGTCCCGTCATGCTGGCA 62.409 66.667 0.00 0.00 0.00 4.92
4468 10159 3.716195 TGGGTCCCGTCATGCTGG 61.716 66.667 2.65 0.00 0.00 4.85
4469 10160 2.436646 GTGGGTCCCGTCATGCTG 60.437 66.667 2.65 0.00 0.00 4.41
4470 10161 2.607750 AGTGGGTCCCGTCATGCT 60.608 61.111 2.65 0.00 0.00 3.79
4471 10162 2.436646 CAGTGGGTCCCGTCATGC 60.437 66.667 2.65 0.00 0.00 4.06
4472 10163 2.436646 GCAGTGGGTCCCGTCATG 60.437 66.667 2.65 0.23 0.00 3.07
4473 10164 4.082523 CGCAGTGGGTCCCGTCAT 62.083 66.667 2.65 0.00 0.00 3.06
4478 10169 4.699522 GTCACCGCAGTGGGTCCC 62.700 72.222 4.64 0.00 44.64 4.46
4479 10170 3.883744 CTGTCACCGCAGTGGGTCC 62.884 68.421 4.64 0.00 44.64 4.46
4480 10171 2.357517 CTGTCACCGCAGTGGGTC 60.358 66.667 4.64 0.00 44.64 4.46
4481 10172 1.978455 TTTCTGTCACCGCAGTGGGT 61.978 55.000 4.64 1.95 44.64 4.51
4482 10173 0.817634 TTTTCTGTCACCGCAGTGGG 60.818 55.000 4.64 0.00 44.64 4.61
4483 10174 0.588252 CTTTTCTGTCACCGCAGTGG 59.412 55.000 0.00 0.00 44.64 4.00
4484 10175 0.588252 CCTTTTCTGTCACCGCAGTG 59.412 55.000 0.00 0.00 46.00 3.66
4485 10176 0.535102 CCCTTTTCTGTCACCGCAGT 60.535 55.000 0.00 0.00 37.70 4.40
4486 10177 0.250295 TCCCTTTTCTGTCACCGCAG 60.250 55.000 0.00 0.00 37.81 5.18
4487 10178 0.250295 CTCCCTTTTCTGTCACCGCA 60.250 55.000 0.00 0.00 0.00 5.69
4488 10179 0.955919 CCTCCCTTTTCTGTCACCGC 60.956 60.000 0.00 0.00 0.00 5.68
4489 10180 0.321653 CCCTCCCTTTTCTGTCACCG 60.322 60.000 0.00 0.00 0.00 4.94
4490 10181 0.609406 GCCCTCCCTTTTCTGTCACC 60.609 60.000 0.00 0.00 0.00 4.02
4491 10182 0.110486 TGCCCTCCCTTTTCTGTCAC 59.890 55.000 0.00 0.00 0.00 3.67
4492 10183 0.401738 CTGCCCTCCCTTTTCTGTCA 59.598 55.000 0.00 0.00 0.00 3.58
4493 10184 0.322906 CCTGCCCTCCCTTTTCTGTC 60.323 60.000 0.00 0.00 0.00 3.51
4494 10185 1.770324 CCTGCCCTCCCTTTTCTGT 59.230 57.895 0.00 0.00 0.00 3.41
4495 10186 1.000396 CCCTGCCCTCCCTTTTCTG 60.000 63.158 0.00 0.00 0.00 3.02
4496 10187 2.923910 GCCCTGCCCTCCCTTTTCT 61.924 63.158 0.00 0.00 0.00 2.52
4497 10188 2.363018 GCCCTGCCCTCCCTTTTC 60.363 66.667 0.00 0.00 0.00 2.29
4498 10189 4.366684 CGCCCTGCCCTCCCTTTT 62.367 66.667 0.00 0.00 0.00 2.27
4513 10204 0.459411 AACAAAAACAGGCCACACGC 60.459 50.000 5.01 0.00 0.00 5.34
4514 10205 2.003196 AAACAAAAACAGGCCACACG 57.997 45.000 5.01 0.00 0.00 4.49
4515 10206 2.159585 GCAAAACAAAAACAGGCCACAC 60.160 45.455 5.01 0.00 0.00 3.82
4516 10207 2.079925 GCAAAACAAAAACAGGCCACA 58.920 42.857 5.01 0.00 0.00 4.17
4517 10208 1.061857 CGCAAAACAAAAACAGGCCAC 59.938 47.619 5.01 0.00 0.00 5.01
4518 10209 1.066858 TCGCAAAACAAAAACAGGCCA 60.067 42.857 5.01 0.00 0.00 5.36
4519 10210 1.646189 TCGCAAAACAAAAACAGGCC 58.354 45.000 0.00 0.00 0.00 5.19
4520 10211 3.731274 TTTCGCAAAACAAAAACAGGC 57.269 38.095 0.00 0.00 0.00 4.85
4521 10212 5.262422 GGATTTTCGCAAAACAAAAACAGG 58.738 37.500 0.00 0.00 32.37 4.00
4522 10213 5.262422 GGGATTTTCGCAAAACAAAAACAG 58.738 37.500 0.00 0.00 32.37 3.16
4523 10214 4.095036 GGGGATTTTCGCAAAACAAAAACA 59.905 37.500 0.00 0.00 32.37 2.83
4524 10215 4.334203 AGGGGATTTTCGCAAAACAAAAAC 59.666 37.500 0.00 0.00 32.37 2.43
4525 10216 4.518249 AGGGGATTTTCGCAAAACAAAAA 58.482 34.783 0.00 0.00 32.37 1.94
4526 10217 4.123506 GAGGGGATTTTCGCAAAACAAAA 58.876 39.130 0.00 0.00 32.37 2.44
4527 10218 3.133003 TGAGGGGATTTTCGCAAAACAAA 59.867 39.130 0.00 0.00 32.37 2.83
4528 10219 2.695666 TGAGGGGATTTTCGCAAAACAA 59.304 40.909 0.00 0.00 32.37 2.83
4529 10220 2.311463 TGAGGGGATTTTCGCAAAACA 58.689 42.857 0.00 0.00 32.37 2.83
4530 10221 3.057019 GTTGAGGGGATTTTCGCAAAAC 58.943 45.455 0.00 0.00 32.37 2.43
4531 10222 2.695666 TGTTGAGGGGATTTTCGCAAAA 59.304 40.909 0.00 0.00 34.41 2.44
4532 10223 2.311463 TGTTGAGGGGATTTTCGCAAA 58.689 42.857 0.00 0.00 0.00 3.68
4533 10224 1.988293 TGTTGAGGGGATTTTCGCAA 58.012 45.000 0.00 0.00 0.00 4.85
4534 10225 2.214376 ATGTTGAGGGGATTTTCGCA 57.786 45.000 0.00 0.00 0.00 5.10
4535 10226 3.592898 AAATGTTGAGGGGATTTTCGC 57.407 42.857 0.00 0.00 0.00 4.70
4579 10270 7.881775 ATCTCTAGCGGACCAATTTATTTTT 57.118 32.000 0.00 0.00 0.00 1.94
4580 10271 7.556275 TGAATCTCTAGCGGACCAATTTATTTT 59.444 33.333 0.00 0.00 0.00 1.82
4581 10272 7.054124 TGAATCTCTAGCGGACCAATTTATTT 58.946 34.615 0.00 0.00 0.00 1.40
4582 10273 6.591935 TGAATCTCTAGCGGACCAATTTATT 58.408 36.000 0.00 0.00 0.00 1.40
4583 10274 6.174720 TGAATCTCTAGCGGACCAATTTAT 57.825 37.500 0.00 0.00 0.00 1.40
4584 10275 5.607939 TGAATCTCTAGCGGACCAATTTA 57.392 39.130 0.00 0.00 0.00 1.40
4585 10276 4.487714 TGAATCTCTAGCGGACCAATTT 57.512 40.909 0.00 0.00 0.00 1.82
4586 10277 4.487714 TTGAATCTCTAGCGGACCAATT 57.512 40.909 0.00 0.00 0.00 2.32
4587 10278 4.192317 GTTTGAATCTCTAGCGGACCAAT 58.808 43.478 0.00 0.00 0.00 3.16
4588 10279 3.596214 GTTTGAATCTCTAGCGGACCAA 58.404 45.455 0.00 0.00 0.00 3.67
4589 10280 2.093658 GGTTTGAATCTCTAGCGGACCA 60.094 50.000 0.00 0.00 0.00 4.02
4590 10281 2.093658 TGGTTTGAATCTCTAGCGGACC 60.094 50.000 0.00 0.00 0.00 4.46
4591 10282 3.190874 CTGGTTTGAATCTCTAGCGGAC 58.809 50.000 0.00 0.00 0.00 4.79
4592 10283 2.418746 GCTGGTTTGAATCTCTAGCGGA 60.419 50.000 0.00 0.00 0.00 5.54
4593 10284 1.936547 GCTGGTTTGAATCTCTAGCGG 59.063 52.381 0.00 0.00 0.00 5.52
4594 10285 1.590238 CGCTGGTTTGAATCTCTAGCG 59.410 52.381 13.45 13.45 44.89 4.26
4595 10286 2.605366 GTCGCTGGTTTGAATCTCTAGC 59.395 50.000 0.00 0.00 0.00 3.42
4596 10287 3.118956 AGGTCGCTGGTTTGAATCTCTAG 60.119 47.826 0.00 0.00 0.00 2.43
4597 10288 2.832129 AGGTCGCTGGTTTGAATCTCTA 59.168 45.455 0.00 0.00 0.00 2.43
4598 10289 1.625818 AGGTCGCTGGTTTGAATCTCT 59.374 47.619 0.00 0.00 0.00 3.10
4599 10290 1.734465 CAGGTCGCTGGTTTGAATCTC 59.266 52.381 0.00 0.00 0.00 2.75
4600 10291 1.813513 CAGGTCGCTGGTTTGAATCT 58.186 50.000 0.00 0.00 0.00 2.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.