Multiple sequence alignment - TraesCS3B01G165900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G165900 chr3B 100.000 7372 0 0 1 7372 166165921 166158550 0.000000e+00 13614.0
1 TraesCS3B01G165900 chr3B 91.223 319 28 0 4800 5118 166161071 166160753 1.140000e-117 435.0
2 TraesCS3B01G165900 chr3B 91.223 319 28 0 4851 5169 166161122 166160804 1.140000e-117 435.0
3 TraesCS3B01G165900 chr3B 83.799 179 14 5 4745 4908 166160937 166160759 9.900000e-34 156.0
4 TraesCS3B01G165900 chr3A 93.974 5792 248 52 1240 7011 110778817 110784527 0.000000e+00 8669.0
5 TraesCS3B01G165900 chr3A 91.896 1197 68 14 1 1173 110777629 110778820 0.000000e+00 1646.0
6 TraesCS3B01G165900 chr3A 89.655 319 30 3 4851 5169 110782350 110782665 3.200000e-108 403.0
7 TraesCS3B01G165900 chr3A 87.870 338 23 8 4745 5067 110782382 110782716 1.500000e-101 381.0
8 TraesCS3B01G165900 chr3D 96.095 3278 82 10 3740 7012 114669811 114673047 0.000000e+00 5302.0
9 TraesCS3B01G165900 chr3D 95.817 2725 83 13 1 2706 114665996 114668708 0.000000e+00 4372.0
10 TraesCS3B01G165900 chr3D 95.648 1011 37 4 2705 3710 114668802 114669810 0.000000e+00 1616.0
11 TraesCS3B01G165900 chr3D 92.835 321 23 0 4798 5118 114670897 114671217 4.030000e-127 466.0
12 TraesCS3B01G165900 chr3D 92.476 319 24 0 4851 5169 114670848 114671166 2.420000e-124 457.0
13 TraesCS3B01G165900 chr3D 92.424 264 20 0 4900 5163 114670846 114671109 1.940000e-100 377.0
14 TraesCS3B01G165900 chr4A 97.583 331 7 1 7042 7372 67295541 67295870 3.860000e-157 566.0
15 TraesCS3B01G165900 chr4A 87.333 300 34 3 7068 7366 148910889 148911185 2.550000e-89 340.0
16 TraesCS3B01G165900 chr2B 96.096 333 13 0 7040 7372 39977379 39977047 1.810000e-150 544.0
17 TraesCS3B01G165900 chr2B 84.592 331 46 4 7042 7371 13039818 13039492 2.570000e-84 324.0
18 TraesCS3B01G165900 chr7B 95.468 331 9 2 7042 7372 641169401 641169077 2.360000e-144 523.0
19 TraesCS3B01G165900 chr2A 84.524 336 42 8 7040 7371 691102467 691102796 2.570000e-84 324.0
20 TraesCS3B01G165900 chr4D 84.273 337 46 6 7037 7371 40821759 40821428 9.230000e-84 322.0
21 TraesCS3B01G165900 chr5B 82.985 335 49 7 7039 7371 682377436 682377108 5.590000e-76 296.0
22 TraesCS3B01G165900 chr5B 84.500 200 25 4 5136 5329 599121253 599121452 7.550000e-45 193.0
23 TraesCS3B01G165900 chr5B 79.048 210 29 12 5136 5339 598753771 598753971 6.000000e-26 130.0
24 TraesCS3B01G165900 chr5B 92.857 42 3 0 2966 3007 306447556 306447597 2.220000e-05 62.1
25 TraesCS3B01G165900 chr4B 82.405 341 53 7 7033 7371 119375185 119374850 2.600000e-74 291.0
26 TraesCS3B01G165900 chr4B 94.048 84 5 0 6927 7010 358791451 358791368 2.160000e-25 128.0
27 TraesCS3B01G165900 chr4B 95.000 80 4 0 6928 7007 523767728 523767807 7.760000e-25 126.0
28 TraesCS3B01G165900 chr4B 93.750 80 5 0 6928 7007 523796683 523796762 3.610000e-23 121.0
29 TraesCS3B01G165900 chr4B 93.750 80 5 0 6928 7007 523825198 523825277 3.610000e-23 121.0
30 TraesCS3B01G165900 chr1D 92.661 109 8 0 4388 4496 310161440 310161332 2.750000e-34 158.0
31 TraesCS3B01G165900 chr1D 97.436 39 1 0 4520 4558 310161335 310161297 4.770000e-07 67.6
32 TraesCS3B01G165900 chr5D 81.283 187 24 9 5156 5339 487007780 487007602 2.770000e-29 141.0
33 TraesCS3B01G165900 chr5D 79.885 174 25 4 5166 5338 487171833 487171997 1.300000e-22 119.0
34 TraesCS3B01G165900 chr5A 94.118 51 3 0 4388 4438 280748656 280748706 2.210000e-10 78.7
35 TraesCS3B01G165900 chr6B 97.436 39 1 0 4520 4558 423096238 423096276 4.770000e-07 67.6
36 TraesCS3B01G165900 chr6A 97.436 39 1 0 4520 4558 26325527 26325489 4.770000e-07 67.6
37 TraesCS3B01G165900 chr1A 97.436 39 1 0 4520 4558 508959349 508959311 4.770000e-07 67.6
38 TraesCS3B01G165900 chr2D 97.143 35 1 0 6677 6711 82021596 82021562 7.990000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G165900 chr3B 166158550 166165921 7371 True 13614.000000 13614 100.000000 1 7372 1 chr3B.!!$R1 7371
1 TraesCS3B01G165900 chr3A 110777629 110784527 6898 False 2774.750000 8669 90.848750 1 7011 4 chr3A.!!$F1 7010
2 TraesCS3B01G165900 chr3D 114665996 114673047 7051 False 2098.333333 5302 94.215833 1 7012 6 chr3D.!!$F1 7011

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
164 173 0.108329 CGGTAGAAGCGGTGGATTGT 60.108 55.000 0.00 0.0 35.16 2.71 F
695 712 0.250901 AATGCGGCAGTCAGGAAACT 60.251 50.000 9.25 0.0 46.44 2.66 F
2287 2320 1.174712 TGCCTTCTGAGTTTGCCAGC 61.175 55.000 0.00 0.0 0.00 4.85 F
3274 3405 1.081708 GGCAACCTTTGGCGTTACG 60.082 57.895 0.00 0.0 46.51 3.18 F
4523 4663 2.042162 ACAGGTTGCCTCCAAATCTCAT 59.958 45.455 0.00 0.0 31.68 2.90 F
5479 5622 0.742505 CCTACCGTGCTCCGTAATCA 59.257 55.000 0.00 0.0 33.66 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2083 2116 3.244044 TGCAATTGTAAAACAGAAGCCCC 60.244 43.478 7.40 0.0 0.00 5.80 R
2555 2588 0.670162 CTGGCTTGTTCCCAGTGTTG 59.330 55.000 0.00 0.0 43.86 3.33 R
3331 3462 0.173708 GGAGTCAGTAGTTGGAGGCG 59.826 60.000 0.00 0.0 0.00 5.52 R
4910 5050 2.289195 TGTCCAACTAACTACTTGCCCG 60.289 50.000 0.00 0.0 0.00 6.13 R
5757 5900 0.250513 CTGACTGGTCTTGGTAGCCC 59.749 60.000 2.38 0.0 0.00 5.19 R
7291 7441 0.027586 AGTCGACGTTTGTTTGCAGC 59.972 50.000 10.46 0.0 0.00 5.25 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 2.293399 GCACTATTTCGGCCTATTTGGG 59.707 50.000 0.00 0.00 36.00 4.12
114 123 2.621526 AGGTTTTGGTCCGAATGTTGTC 59.378 45.455 0.00 0.00 0.00 3.18
164 173 0.108329 CGGTAGAAGCGGTGGATTGT 60.108 55.000 0.00 0.00 35.16 2.71
234 243 4.341502 CGGTTTTGGGCGGCTGTG 62.342 66.667 9.56 0.00 0.00 3.66
287 300 2.058798 CTAGTCGAAAAACTGCTGCGA 58.941 47.619 0.00 0.00 0.00 5.10
288 301 3.058457 GTCGAAAAACTGCTGCGAC 57.942 52.632 0.00 0.00 43.37 5.19
362 376 8.482852 TTGATTTCTCCCAGAATTTTTCTTCT 57.517 30.769 0.00 0.00 38.11 2.85
663 680 3.504906 AGCTTGTTGATGTGATTGTCAGG 59.495 43.478 0.00 0.00 0.00 3.86
695 712 0.250901 AATGCGGCAGTCAGGAAACT 60.251 50.000 9.25 0.00 46.44 2.66
723 740 2.233922 ACCGTAGAGGGAATGTGAAGTG 59.766 50.000 0.00 0.00 46.96 3.16
738 755 4.098349 TGTGAAGTGATTTGCAAGCTCTTT 59.902 37.500 15.31 9.19 31.61 2.52
832 849 3.165071 CACCTTAATTTTGGGCCTCAGT 58.835 45.455 4.53 0.00 0.00 3.41
848 865 6.116126 GGCCTCAGTAGTTTAGAAATCACAT 58.884 40.000 0.00 0.00 0.00 3.21
864 881 1.300971 ACATCATGAGTGTGTGCCGC 61.301 55.000 0.09 0.00 0.00 6.53
979 1000 6.357367 TCCCCTATTTCAGTTCTATTGCTTC 58.643 40.000 0.00 0.00 0.00 3.86
1127 1148 6.788684 CATTGCTTGGAAATCATGTTTCAA 57.211 33.333 17.03 6.42 0.00 2.69
1181 1205 7.849804 AATATTTCTTGTTCTCGTGCTACAT 57.150 32.000 0.00 0.00 0.00 2.29
1200 1224 5.075858 ACATTATGTGGGCTTGTGAAATG 57.924 39.130 0.00 0.00 0.00 2.32
1225 1249 6.018180 GTCTTGAAACACCGAAATAAGTCAGT 60.018 38.462 0.00 0.00 0.00 3.41
1238 1262 9.151471 CGAAATAAGTCAGTCCTTGATCTTAAA 57.849 33.333 0.00 0.00 38.29 1.52
1332 1356 4.351874 TCTCCTTCAAGTGTGTTAAGGG 57.648 45.455 0.00 0.00 39.21 3.95
1591 1616 7.710044 ACTGTACAATGCAACAAATTTTCATGA 59.290 29.630 0.00 0.00 0.00 3.07
1614 1639 7.663827 TGAAATCATTTCATCTTTGTCTTGCT 58.336 30.769 8.85 0.00 44.21 3.91
1615 1640 7.597369 TGAAATCATTTCATCTTTGTCTTGCTG 59.403 33.333 8.85 0.00 44.21 4.41
1616 1641 6.585695 ATCATTTCATCTTTGTCTTGCTGT 57.414 33.333 0.00 0.00 0.00 4.40
1617 1642 7.692460 ATCATTTCATCTTTGTCTTGCTGTA 57.308 32.000 0.00 0.00 0.00 2.74
1618 1643 7.692460 TCATTTCATCTTTGTCTTGCTGTAT 57.308 32.000 0.00 0.00 0.00 2.29
1619 1644 7.532571 TCATTTCATCTTTGTCTTGCTGTATG 58.467 34.615 0.00 0.00 0.00 2.39
1620 1645 4.952262 TCATCTTTGTCTTGCTGTATGC 57.048 40.909 0.00 0.00 43.25 3.14
1621 1646 4.582869 TCATCTTTGTCTTGCTGTATGCT 58.417 39.130 0.00 0.00 43.37 3.79
1622 1647 5.005740 TCATCTTTGTCTTGCTGTATGCTT 58.994 37.500 0.00 0.00 43.37 3.91
1682 1707 5.518812 TGCTGTATGCTTTTGTTGTACTTG 58.481 37.500 0.00 0.00 43.37 3.16
1685 1710 6.074888 GCTGTATGCTTTTGTTGTACTTGTTG 60.075 38.462 0.00 0.00 38.95 3.33
1686 1711 6.857956 TGTATGCTTTTGTTGTACTTGTTGT 58.142 32.000 0.00 0.00 0.00 3.32
1687 1712 7.986562 TGTATGCTTTTGTTGTACTTGTTGTA 58.013 30.769 0.00 0.00 0.00 2.41
1688 1713 8.625651 TGTATGCTTTTGTTGTACTTGTTGTAT 58.374 29.630 0.00 0.00 33.23 2.29
1689 1714 9.458374 GTATGCTTTTGTTGTACTTGTTGTATT 57.542 29.630 0.00 0.00 33.23 1.89
1690 1715 7.748031 TGCTTTTGTTGTACTTGTTGTATTG 57.252 32.000 0.00 0.00 33.23 1.90
1691 1716 7.316640 TGCTTTTGTTGTACTTGTTGTATTGT 58.683 30.769 0.00 0.00 33.23 2.71
1692 1717 7.486551 TGCTTTTGTTGTACTTGTTGTATTGTC 59.513 33.333 0.00 0.00 33.23 3.18
1952 1985 8.022550 TGCATGTGTTTTATGACTTTATCACTG 58.977 33.333 0.00 0.00 41.24 3.66
2042 2075 3.572661 AGGTTCCAGTTTAGGGGACTA 57.427 47.619 0.00 0.00 43.67 2.59
2054 2087 7.769507 CAGTTTAGGGGACTACTTTTTATCTCC 59.230 40.741 0.00 0.00 44.30 3.71
2287 2320 1.174712 TGCCTTCTGAGTTTGCCAGC 61.175 55.000 0.00 0.00 0.00 4.85
2419 2452 7.377766 TGTTCATACAGATTCTAAGGCAAAC 57.622 36.000 0.00 0.00 0.00 2.93
2571 2604 1.338020 CCTTCAACACTGGGAACAAGC 59.662 52.381 0.00 0.00 42.06 4.01
2597 2630 7.134815 CAGTCAAACAAGAACCACTCAATAAG 58.865 38.462 0.00 0.00 0.00 1.73
2602 2635 7.964604 AACAAGAACCACTCAATAAGTAGAC 57.035 36.000 0.00 0.00 36.07 2.59
2625 2658 4.687262 ATATTCTTGGCCATGGGATCAT 57.313 40.909 15.13 6.16 0.00 2.45
2633 2666 3.776969 TGGCCATGGGATCATATCTAGAC 59.223 47.826 15.13 0.00 31.33 2.59
2820 2948 8.340757 TGGTTACCCTATTTTAATGGTCATTCT 58.659 33.333 0.00 0.00 32.27 2.40
2994 3125 1.816224 AGCCGCGACAATTAATTTGGT 59.184 42.857 8.23 0.00 39.80 3.67
3021 3152 5.326200 AGGGAGTACACTTATTTCAGTCG 57.674 43.478 0.00 0.00 0.00 4.18
3047 3178 5.405935 AGTTGTTCTTTTCTGGCTTTTGT 57.594 34.783 0.00 0.00 0.00 2.83
3085 3216 3.713248 TCTCCCTGCAGATATGTCACATT 59.287 43.478 17.39 0.00 0.00 2.71
3274 3405 1.081708 GGCAACCTTTGGCGTTACG 60.082 57.895 0.00 0.00 46.51 3.18
3331 3462 8.440833 GTGTGTGTTACATATAAACCTTCACTC 58.559 37.037 0.00 0.00 42.24 3.51
3382 3513 9.434420 TTTATTGCTAAAATTTCCCATGTCTTG 57.566 29.630 0.00 0.00 0.00 3.02
3486 3617 3.488489 GTGTGTTTTGCGCAAGGTATAG 58.512 45.455 23.68 0.00 39.56 1.31
3510 3641 5.799827 TTGCTACCAGCCTTTTAAAATGT 57.200 34.783 0.09 0.00 41.51 2.71
3569 3700 2.483014 ATTGTTGGCGCTTACTGGTA 57.517 45.000 7.64 0.00 0.00 3.25
3570 3701 2.483014 TTGTTGGCGCTTACTGGTAT 57.517 45.000 7.64 0.00 0.00 2.73
3605 3737 7.367285 TGACTAAATATTCGCTTGCAACTTTT 58.633 30.769 0.00 0.00 0.00 2.27
3737 3870 5.476599 TGGTTTGATGTTTAGTTGCTAGCAT 59.523 36.000 20.13 7.21 0.00 3.79
3864 3998 9.166173 CAGTGTTATCATATTTTCTCTTGGACA 57.834 33.333 0.00 0.00 0.00 4.02
3903 4037 5.636543 AGGTTATAACGTTCCGTCAAAGAAG 59.363 40.000 2.82 0.00 39.99 2.85
3914 4048 2.737252 CGTCAAAGAAGAACTGGTAGCC 59.263 50.000 0.00 0.00 0.00 3.93
3915 4049 3.740115 GTCAAAGAAGAACTGGTAGCCA 58.260 45.455 0.00 0.00 0.00 4.75
4178 4317 2.694628 GGGATATGCTTGTCAATGCCAA 59.305 45.455 0.00 0.00 30.78 4.52
4180 4319 4.553323 GGATATGCTTGTCAATGCCAATC 58.447 43.478 0.00 7.07 0.00 2.67
4182 4321 3.520290 ATGCTTGTCAATGCCAATCTG 57.480 42.857 5.06 0.00 0.00 2.90
4184 4323 3.419943 TGCTTGTCAATGCCAATCTGTA 58.580 40.909 5.06 0.00 0.00 2.74
4186 4325 4.463539 TGCTTGTCAATGCCAATCTGTATT 59.536 37.500 5.06 0.00 0.00 1.89
4222 4362 5.719085 TGGAAAATTATGGCTTGGTATGTGT 59.281 36.000 0.00 0.00 0.00 3.72
4296 4436 5.830000 TGCGTCAATGATGTAGTAGTACT 57.170 39.130 8.14 8.14 0.00 2.73
4298 4438 4.904724 GCGTCAATGATGTAGTAGTACTCG 59.095 45.833 5.96 1.36 0.00 4.18
4523 4663 2.042162 ACAGGTTGCCTCCAAATCTCAT 59.958 45.455 0.00 0.00 31.68 2.90
4673 4813 5.598005 TGAAACTTCATGGAGAAAACCACAT 59.402 36.000 8.39 0.00 43.03 3.21
4683 4823 7.099266 TGGAGAAAACCACATTATGCTAATG 57.901 36.000 11.86 11.86 34.77 1.90
4849 4989 8.637196 TCGATATCATCTACTGATACAAGGTT 57.363 34.615 3.12 0.00 46.92 3.50
4891 5031 9.781633 AGTAGTTAGTTCGATATCATCTACTGT 57.218 33.333 3.12 0.00 35.71 3.55
4910 5050 3.408634 TGTTACAAGGTCTAAAGCTGCC 58.591 45.455 0.00 0.00 32.35 4.85
4913 5053 1.026718 CAAGGTCTAAAGCTGCCGGG 61.027 60.000 2.18 0.00 32.35 5.73
4949 5089 7.343057 AGTTGGACATCATCTACTGATACAAGA 59.657 37.037 0.00 0.00 42.91 3.02
4979 5119 4.799586 GCTGCAGGACAAGTAGTTAGTTCA 60.800 45.833 17.12 0.00 0.00 3.18
5035 5178 5.869888 CAGGACAAGTAGTTAGTTGGACATC 59.130 44.000 10.54 0.95 40.15 3.06
5036 5179 5.542635 AGGACAAGTAGTTAGTTGGACATCA 59.457 40.000 10.54 0.00 40.15 3.07
5037 5180 6.213600 AGGACAAGTAGTTAGTTGGACATCAT 59.786 38.462 10.54 0.00 40.15 2.45
5078 5221 2.003301 GCTGCAGGACAAGTAGTTAGC 58.997 52.381 17.12 0.00 0.00 3.09
5131 5274 3.680458 GCTGCAGGACAAGTAGTTAGTTC 59.320 47.826 17.12 0.00 0.00 3.01
5339 5482 5.473504 AGCAGTTGTTAAACCTCATGTTAGG 59.526 40.000 0.00 0.00 42.82 2.69
5453 5596 1.620819 ACTGCATTGGAGAGTTCGAGT 59.379 47.619 12.54 0.00 0.00 4.18
5479 5622 0.742505 CCTACCGTGCTCCGTAATCA 59.257 55.000 0.00 0.00 33.66 2.57
5492 5635 6.312918 TGCTCCGTAATCATTCAAGTTCTAAC 59.687 38.462 0.00 0.00 0.00 2.34
5757 5900 3.532542 TCTGAGCATGCAGAGAAGATTG 58.467 45.455 21.98 0.00 39.84 2.67
5866 6009 2.419324 GCAAGTCTTCTGATTCAGGCAG 59.581 50.000 13.59 9.96 34.71 4.85
5936 6079 2.361104 GCCCCGGCACAAGATTCA 60.361 61.111 0.00 0.00 41.49 2.57
5984 6127 3.776969 ACATCATTAGCTGGGTCTCAGAA 59.223 43.478 3.10 0.00 46.18 3.02
6004 6147 0.182061 TGCCTGGAAGATGATGGAGC 59.818 55.000 0.00 0.00 34.07 4.70
6012 6155 3.626670 GGAAGATGATGGAGCTCACAAAG 59.373 47.826 17.19 0.00 0.00 2.77
6308 6451 5.061721 ACCAAAACTGGACTAATGGAAGT 57.938 39.130 0.00 0.00 0.00 3.01
6315 6458 4.574674 TGGACTAATGGAAGTGCAGATT 57.425 40.909 0.00 0.00 42.12 2.40
6335 6478 1.102809 CAGGCCTGAACAGTGCACAA 61.103 55.000 29.88 0.00 0.00 3.33
6396 6539 0.764890 AGAGCTGTGTTGCAACCCTA 59.235 50.000 26.14 11.60 34.99 3.53
6397 6540 1.142870 AGAGCTGTGTTGCAACCCTAA 59.857 47.619 26.14 5.10 34.99 2.69
6398 6541 1.537202 GAGCTGTGTTGCAACCCTAAG 59.463 52.381 26.14 17.67 34.99 2.18
6399 6542 1.133792 AGCTGTGTTGCAACCCTAAGT 60.134 47.619 26.14 4.48 34.99 2.24
6400 6543 1.266989 GCTGTGTTGCAACCCTAAGTC 59.733 52.381 26.14 10.51 0.00 3.01
6401 6544 1.880027 CTGTGTTGCAACCCTAAGTCC 59.120 52.381 26.14 0.00 0.00 3.85
6402 6545 1.244816 GTGTTGCAACCCTAAGTCCC 58.755 55.000 26.14 0.00 0.00 4.46
6403 6546 1.145571 TGTTGCAACCCTAAGTCCCT 58.854 50.000 26.14 0.00 0.00 4.20
6415 6558 6.210522 ACCCTAAGTCCCTAACAATACAGAT 58.789 40.000 0.00 0.00 0.00 2.90
6468 6611 1.151587 AGAAGGGGTGGATGGTGGT 60.152 57.895 0.00 0.00 0.00 4.16
6567 6711 1.172180 ACGGTTGTGTTGGATGGCAG 61.172 55.000 0.00 0.00 0.00 4.85
6611 6755 2.968574 AGCCGTCTCATTGGATCTGTAT 59.031 45.455 0.00 0.00 0.00 2.29
6666 6811 3.521531 TGTGCTGGACCATGGATTACTTA 59.478 43.478 21.47 0.00 0.00 2.24
6667 6812 3.877508 GTGCTGGACCATGGATTACTTAC 59.122 47.826 21.47 5.39 0.00 2.34
6668 6813 3.780294 TGCTGGACCATGGATTACTTACT 59.220 43.478 21.47 0.00 0.00 2.24
6669 6814 4.227300 TGCTGGACCATGGATTACTTACTT 59.773 41.667 21.47 0.00 0.00 2.24
6722 6867 2.223923 GCTCCACGATGATAGCAGAAGT 60.224 50.000 0.00 0.00 35.05 3.01
6724 6869 3.291584 TCCACGATGATAGCAGAAGTCT 58.708 45.455 0.00 0.00 0.00 3.24
6768 6918 4.022413 TGGTTTACCATCCATTTCGTCA 57.978 40.909 0.00 0.00 42.01 4.35
6794 6944 9.662947 AAACTAGCCTAAATCGTAAACTGTATT 57.337 29.630 0.00 0.00 0.00 1.89
6884 7034 1.959282 CTCTGCCTTTTTCTGCCAAGT 59.041 47.619 0.00 0.00 0.00 3.16
7000 7150 0.592637 CGACAGCAAGCACCAATTGA 59.407 50.000 7.12 0.00 0.00 2.57
7012 7162 1.342174 ACCAATTGAGCTGGTGCAAAG 59.658 47.619 7.12 0.00 45.67 2.77
7013 7163 1.342174 CCAATTGAGCTGGTGCAAAGT 59.658 47.619 7.12 0.00 42.74 2.66
7014 7164 2.557924 CCAATTGAGCTGGTGCAAAGTA 59.442 45.455 7.12 0.00 42.74 2.24
7015 7165 3.366679 CCAATTGAGCTGGTGCAAAGTAG 60.367 47.826 7.12 0.00 42.74 2.57
7016 7166 2.928801 TTGAGCTGGTGCAAAGTAGA 57.071 45.000 0.00 0.00 42.74 2.59
7017 7167 2.928801 TGAGCTGGTGCAAAGTAGAA 57.071 45.000 0.00 0.00 42.74 2.10
7018 7168 3.423539 TGAGCTGGTGCAAAGTAGAAT 57.576 42.857 0.00 0.00 42.74 2.40
7019 7169 3.754965 TGAGCTGGTGCAAAGTAGAATT 58.245 40.909 0.00 0.00 42.74 2.17
7020 7170 3.503363 TGAGCTGGTGCAAAGTAGAATTG 59.497 43.478 0.00 0.00 42.74 2.32
7033 7183 6.428385 AAGTAGAATTGCTAGTCAATGTGC 57.572 37.500 11.51 7.40 44.23 4.57
7034 7184 4.878397 AGTAGAATTGCTAGTCAATGTGCC 59.122 41.667 11.51 4.55 44.23 5.01
7035 7185 3.689347 AGAATTGCTAGTCAATGTGCCA 58.311 40.909 11.51 0.00 44.23 4.92
7036 7186 4.275810 AGAATTGCTAGTCAATGTGCCAT 58.724 39.130 11.51 0.00 44.23 4.40
7037 7187 5.439721 AGAATTGCTAGTCAATGTGCCATA 58.560 37.500 11.51 0.00 44.23 2.74
7038 7188 5.887598 AGAATTGCTAGTCAATGTGCCATAA 59.112 36.000 11.51 0.00 44.23 1.90
7039 7189 6.548622 AGAATTGCTAGTCAATGTGCCATAAT 59.451 34.615 11.51 0.00 44.23 1.28
7040 7190 6.720112 ATTGCTAGTCAATGTGCCATAATT 57.280 33.333 10.39 0.00 43.40 1.40
7041 7191 6.528537 TTGCTAGTCAATGTGCCATAATTT 57.471 33.333 0.00 0.00 0.00 1.82
7042 7192 6.528537 TGCTAGTCAATGTGCCATAATTTT 57.471 33.333 0.00 0.00 0.00 1.82
7043 7193 6.934056 TGCTAGTCAATGTGCCATAATTTTT 58.066 32.000 0.00 0.00 0.00 1.94
7064 7214 3.505464 TTTTTCGAAACGGAGGCAAAA 57.495 38.095 10.79 0.00 0.00 2.44
7065 7215 2.766970 TTTCGAAACGGAGGCAAAAG 57.233 45.000 6.47 0.00 0.00 2.27
7066 7216 1.956297 TTCGAAACGGAGGCAAAAGA 58.044 45.000 0.00 0.00 0.00 2.52
7067 7217 2.178912 TCGAAACGGAGGCAAAAGAT 57.821 45.000 0.00 0.00 0.00 2.40
7068 7218 2.500229 TCGAAACGGAGGCAAAAGATT 58.500 42.857 0.00 0.00 0.00 2.40
7069 7219 2.882137 TCGAAACGGAGGCAAAAGATTT 59.118 40.909 0.00 0.00 0.00 2.17
7070 7220 2.979813 CGAAACGGAGGCAAAAGATTTG 59.020 45.455 0.00 0.00 0.00 2.32
7071 7221 2.438868 AACGGAGGCAAAAGATTTGC 57.561 45.000 17.18 17.18 44.22 3.68
7079 7229 3.598019 GCAAAAGATTTGCCTCATCCA 57.402 42.857 15.12 0.00 39.38 3.41
7080 7230 4.133013 GCAAAAGATTTGCCTCATCCAT 57.867 40.909 15.12 0.00 39.38 3.41
7081 7231 4.510571 GCAAAAGATTTGCCTCATCCATT 58.489 39.130 15.12 0.00 39.38 3.16
7082 7232 5.663456 GCAAAAGATTTGCCTCATCCATTA 58.337 37.500 15.12 0.00 39.38 1.90
7083 7233 6.108015 GCAAAAGATTTGCCTCATCCATTAA 58.892 36.000 15.12 0.00 39.38 1.40
7084 7234 6.594937 GCAAAAGATTTGCCTCATCCATTAAA 59.405 34.615 15.12 0.00 39.38 1.52
7085 7235 7.281549 GCAAAAGATTTGCCTCATCCATTAAAT 59.718 33.333 15.12 0.00 39.38 1.40
7086 7236 9.820725 CAAAAGATTTGCCTCATCCATTAAATA 57.179 29.630 0.00 0.00 0.00 1.40
7089 7239 7.664758 AGATTTGCCTCATCCATTAAATAAGC 58.335 34.615 0.00 0.00 0.00 3.09
7090 7240 6.788598 TTTGCCTCATCCATTAAATAAGCA 57.211 33.333 0.00 0.00 0.00 3.91
7091 7241 6.395426 TTGCCTCATCCATTAAATAAGCAG 57.605 37.500 0.00 0.00 0.00 4.24
7092 7242 5.693961 TGCCTCATCCATTAAATAAGCAGA 58.306 37.500 0.00 0.00 0.00 4.26
7093 7243 6.128486 TGCCTCATCCATTAAATAAGCAGAA 58.872 36.000 0.00 0.00 0.00 3.02
7094 7244 6.263842 TGCCTCATCCATTAAATAAGCAGAAG 59.736 38.462 0.00 0.00 0.00 2.85
7095 7245 6.488006 GCCTCATCCATTAAATAAGCAGAAGA 59.512 38.462 0.00 0.00 0.00 2.87
7096 7246 7.308469 GCCTCATCCATTAAATAAGCAGAAGAG 60.308 40.741 0.00 0.00 0.00 2.85
7097 7247 7.935755 CCTCATCCATTAAATAAGCAGAAGAGA 59.064 37.037 0.00 0.00 0.00 3.10
7098 7248 9.334947 CTCATCCATTAAATAAGCAGAAGAGAA 57.665 33.333 0.00 0.00 0.00 2.87
7099 7249 9.857656 TCATCCATTAAATAAGCAGAAGAGAAT 57.142 29.630 0.00 0.00 0.00 2.40
7102 7252 8.408601 TCCATTAAATAAGCAGAAGAGAATTGC 58.591 33.333 0.00 0.00 38.09 3.56
7103 7253 7.650903 CCATTAAATAAGCAGAAGAGAATTGCC 59.349 37.037 0.00 0.00 38.58 4.52
7104 7254 5.588958 AAATAAGCAGAAGAGAATTGCCC 57.411 39.130 0.00 0.00 38.58 5.36
7105 7255 1.457346 AAGCAGAAGAGAATTGCCCG 58.543 50.000 0.00 0.00 38.58 6.13
7106 7256 0.393537 AGCAGAAGAGAATTGCCCGG 60.394 55.000 0.00 0.00 38.58 5.73
7107 7257 0.678048 GCAGAAGAGAATTGCCCGGT 60.678 55.000 0.00 0.00 31.79 5.28
7108 7258 1.826385 CAGAAGAGAATTGCCCGGTT 58.174 50.000 0.00 0.00 0.00 4.44
7109 7259 2.939640 GCAGAAGAGAATTGCCCGGTTA 60.940 50.000 0.00 0.00 31.79 2.85
7110 7260 3.343617 CAGAAGAGAATTGCCCGGTTAA 58.656 45.455 0.00 0.00 0.00 2.01
7111 7261 3.947834 CAGAAGAGAATTGCCCGGTTAAT 59.052 43.478 0.00 0.00 0.00 1.40
7112 7262 4.399303 CAGAAGAGAATTGCCCGGTTAATT 59.601 41.667 11.61 11.61 0.00 1.40
7113 7263 5.016831 AGAAGAGAATTGCCCGGTTAATTT 58.983 37.500 12.67 5.37 0.00 1.82
7114 7264 6.094881 CAGAAGAGAATTGCCCGGTTAATTTA 59.905 38.462 12.67 0.00 0.00 1.40
7115 7265 6.318900 AGAAGAGAATTGCCCGGTTAATTTAG 59.681 38.462 12.67 0.00 0.00 1.85
7116 7266 4.338400 AGAGAATTGCCCGGTTAATTTAGC 59.662 41.667 12.67 1.90 0.00 3.09
7117 7267 3.066203 AGAATTGCCCGGTTAATTTAGCG 59.934 43.478 8.94 8.94 38.65 4.26
7125 7275 3.419004 CGGTTAATTTAGCGGAAAACCG 58.581 45.455 8.09 8.98 40.62 4.44
7126 7276 3.728566 CGGTTAATTTAGCGGAAAACCGG 60.729 47.826 14.81 0.00 41.87 5.28
7127 7277 3.427909 GGTTAATTTAGCGGAAAACCGGG 60.428 47.826 6.32 0.00 0.00 5.73
7128 7278 0.528924 AATTTAGCGGAAAACCGGGC 59.471 50.000 6.32 0.00 0.00 6.13
7129 7279 1.650314 ATTTAGCGGAAAACCGGGCG 61.650 55.000 6.32 0.00 0.00 6.13
7130 7280 2.728443 TTTAGCGGAAAACCGGGCGA 62.728 55.000 6.32 0.00 0.00 5.54
7131 7281 2.728443 TTAGCGGAAAACCGGGCGAA 62.728 55.000 6.32 0.00 0.00 4.70
7132 7282 2.728443 TAGCGGAAAACCGGGCGAAA 62.728 55.000 6.32 0.00 0.00 3.46
7133 7283 3.032339 CGGAAAACCGGGCGAAAA 58.968 55.556 6.32 0.00 0.00 2.29
7134 7284 1.370778 CGGAAAACCGGGCGAAAAC 60.371 57.895 6.32 0.00 0.00 2.43
7135 7285 1.007038 GGAAAACCGGGCGAAAACC 60.007 57.895 6.32 0.00 0.00 3.27
7136 7286 1.734748 GAAAACCGGGCGAAAACCA 59.265 52.632 6.32 0.00 0.00 3.67
7137 7287 0.315886 GAAAACCGGGCGAAAACCAT 59.684 50.000 6.32 0.00 0.00 3.55
7138 7288 0.315886 AAAACCGGGCGAAAACCATC 59.684 50.000 6.32 0.00 0.00 3.51
7139 7289 0.824182 AAACCGGGCGAAAACCATCA 60.824 50.000 6.32 0.00 0.00 3.07
7140 7290 1.520600 AACCGGGCGAAAACCATCAC 61.521 55.000 6.32 0.00 0.00 3.06
7141 7291 1.969064 CCGGGCGAAAACCATCACA 60.969 57.895 0.00 0.00 0.00 3.58
7142 7292 1.519751 CCGGGCGAAAACCATCACAA 61.520 55.000 0.00 0.00 0.00 3.33
7143 7293 0.525761 CGGGCGAAAACCATCACAAT 59.474 50.000 0.00 0.00 0.00 2.71
7144 7294 1.467374 CGGGCGAAAACCATCACAATC 60.467 52.381 0.00 0.00 0.00 2.67
7145 7295 1.818674 GGGCGAAAACCATCACAATCT 59.181 47.619 0.00 0.00 0.00 2.40
7146 7296 2.415893 GGGCGAAAACCATCACAATCTG 60.416 50.000 0.00 0.00 0.00 2.90
7147 7297 2.253603 GCGAAAACCATCACAATCTGC 58.746 47.619 0.00 0.00 0.00 4.26
7148 7298 2.095059 GCGAAAACCATCACAATCTGCT 60.095 45.455 0.00 0.00 0.00 4.24
7149 7299 3.495193 CGAAAACCATCACAATCTGCTG 58.505 45.455 0.00 0.00 0.00 4.41
7150 7300 3.189080 CGAAAACCATCACAATCTGCTGA 59.811 43.478 0.00 0.00 0.00 4.26
7151 7301 4.320421 CGAAAACCATCACAATCTGCTGAA 60.320 41.667 0.00 0.00 0.00 3.02
7152 7302 5.620654 CGAAAACCATCACAATCTGCTGAAT 60.621 40.000 0.00 0.00 0.00 2.57
7153 7303 4.713824 AACCATCACAATCTGCTGAATG 57.286 40.909 7.08 7.08 0.00 2.67
7154 7304 3.021695 ACCATCACAATCTGCTGAATGG 58.978 45.455 15.80 15.80 38.26 3.16
7155 7305 2.223735 CCATCACAATCTGCTGAATGGC 60.224 50.000 12.61 0.00 31.36 4.40
7156 7306 1.089112 TCACAATCTGCTGAATGGCG 58.911 50.000 12.61 4.30 34.52 5.69
7157 7307 0.524816 CACAATCTGCTGAATGGCGC 60.525 55.000 12.61 0.00 34.52 6.53
7158 7308 0.961857 ACAATCTGCTGAATGGCGCA 60.962 50.000 10.83 0.00 34.52 6.09
7159 7309 0.384309 CAATCTGCTGAATGGCGCAT 59.616 50.000 10.83 0.00 35.32 4.73
7160 7310 1.605232 CAATCTGCTGAATGGCGCATA 59.395 47.619 10.83 0.00 35.32 3.14
7161 7311 1.233019 ATCTGCTGAATGGCGCATAC 58.767 50.000 10.83 0.00 35.32 2.39
7162 7312 0.107752 TCTGCTGAATGGCGCATACA 60.108 50.000 10.83 0.00 35.32 2.29
7163 7313 0.734309 CTGCTGAATGGCGCATACAA 59.266 50.000 10.83 0.00 35.32 2.41
7164 7314 1.132834 CTGCTGAATGGCGCATACAAA 59.867 47.619 10.83 0.00 35.32 2.83
7165 7315 1.543358 TGCTGAATGGCGCATACAAAA 59.457 42.857 10.83 0.00 34.52 2.44
7166 7316 2.187707 GCTGAATGGCGCATACAAAAG 58.812 47.619 10.83 0.00 0.00 2.27
7167 7317 2.159393 GCTGAATGGCGCATACAAAAGA 60.159 45.455 10.83 0.00 0.00 2.52
7168 7318 3.489738 GCTGAATGGCGCATACAAAAGAT 60.490 43.478 10.83 0.00 0.00 2.40
7169 7319 4.261155 GCTGAATGGCGCATACAAAAGATA 60.261 41.667 10.83 0.00 0.00 1.98
7170 7320 5.168526 TGAATGGCGCATACAAAAGATAC 57.831 39.130 10.83 0.00 0.00 2.24
7171 7321 4.036262 TGAATGGCGCATACAAAAGATACC 59.964 41.667 10.83 0.00 0.00 2.73
7172 7322 2.294074 TGGCGCATACAAAAGATACCC 58.706 47.619 10.83 0.00 0.00 3.69
7173 7323 1.607148 GGCGCATACAAAAGATACCCC 59.393 52.381 10.83 0.00 0.00 4.95
7174 7324 2.294074 GCGCATACAAAAGATACCCCA 58.706 47.619 0.30 0.00 0.00 4.96
7175 7325 2.032924 GCGCATACAAAAGATACCCCAC 59.967 50.000 0.30 0.00 0.00 4.61
7176 7326 3.275143 CGCATACAAAAGATACCCCACA 58.725 45.455 0.00 0.00 0.00 4.17
7177 7327 3.064820 CGCATACAAAAGATACCCCACAC 59.935 47.826 0.00 0.00 0.00 3.82
7178 7328 4.013728 GCATACAAAAGATACCCCACACA 58.986 43.478 0.00 0.00 0.00 3.72
7179 7329 4.142469 GCATACAAAAGATACCCCACACAC 60.142 45.833 0.00 0.00 0.00 3.82
7180 7330 3.586470 ACAAAAGATACCCCACACACA 57.414 42.857 0.00 0.00 0.00 3.72
7181 7331 3.219281 ACAAAAGATACCCCACACACAC 58.781 45.455 0.00 0.00 0.00 3.82
7182 7332 2.556622 CAAAAGATACCCCACACACACC 59.443 50.000 0.00 0.00 0.00 4.16
7183 7333 1.742308 AAGATACCCCACACACACCT 58.258 50.000 0.00 0.00 0.00 4.00
7184 7334 2.634639 AGATACCCCACACACACCTA 57.365 50.000 0.00 0.00 0.00 3.08
7185 7335 3.130734 AGATACCCCACACACACCTAT 57.869 47.619 0.00 0.00 0.00 2.57
7186 7336 4.274794 AGATACCCCACACACACCTATA 57.725 45.455 0.00 0.00 0.00 1.31
7187 7337 3.965347 AGATACCCCACACACACCTATAC 59.035 47.826 0.00 0.00 0.00 1.47
7188 7338 0.899720 ACCCCACACACACCTATACG 59.100 55.000 0.00 0.00 0.00 3.06
7189 7339 0.177141 CCCCACACACACCTATACGG 59.823 60.000 0.00 0.00 39.35 4.02
7190 7340 1.187974 CCCACACACACCTATACGGA 58.812 55.000 0.00 0.00 36.31 4.69
7191 7341 1.136305 CCCACACACACCTATACGGAG 59.864 57.143 0.00 0.00 36.31 4.63
7192 7342 2.097036 CCACACACACCTATACGGAGA 58.903 52.381 0.00 0.00 36.31 3.71
7193 7343 2.099263 CCACACACACCTATACGGAGAG 59.901 54.545 0.00 0.00 36.31 3.20
7194 7344 2.753452 CACACACACCTATACGGAGAGT 59.247 50.000 0.00 0.00 36.31 3.24
7195 7345 2.753452 ACACACACCTATACGGAGAGTG 59.247 50.000 11.34 11.34 45.50 3.51
7196 7346 1.749634 ACACACCTATACGGAGAGTGC 59.250 52.381 0.00 0.00 37.21 4.40
7197 7347 1.067212 CACACCTATACGGAGAGTGCC 59.933 57.143 0.00 0.00 36.31 5.01
7198 7348 1.063867 ACACCTATACGGAGAGTGCCT 60.064 52.381 0.00 0.00 36.31 4.75
7199 7349 2.032620 CACCTATACGGAGAGTGCCTT 58.967 52.381 0.00 0.00 36.31 4.35
7200 7350 2.032620 ACCTATACGGAGAGTGCCTTG 58.967 52.381 0.00 0.00 36.31 3.61
7201 7351 2.032620 CCTATACGGAGAGTGCCTTGT 58.967 52.381 0.00 0.00 33.16 3.16
7202 7352 2.034812 CCTATACGGAGAGTGCCTTGTC 59.965 54.545 0.00 0.00 33.16 3.18
7203 7353 0.456221 ATACGGAGAGTGCCTTGTCG 59.544 55.000 0.00 0.00 0.00 4.35
7204 7354 0.607217 TACGGAGAGTGCCTTGTCGA 60.607 55.000 0.00 0.00 0.00 4.20
7205 7355 1.153939 CGGAGAGTGCCTTGTCGAG 60.154 63.158 0.00 0.00 0.00 4.04
7206 7356 1.867919 CGGAGAGTGCCTTGTCGAGT 61.868 60.000 0.00 0.00 0.00 4.18
7207 7357 0.318762 GGAGAGTGCCTTGTCGAGTT 59.681 55.000 0.00 0.00 0.00 3.01
7208 7358 1.544691 GGAGAGTGCCTTGTCGAGTTA 59.455 52.381 0.00 0.00 0.00 2.24
7209 7359 2.416162 GGAGAGTGCCTTGTCGAGTTAG 60.416 54.545 0.00 0.00 0.00 2.34
7210 7360 1.067495 AGAGTGCCTTGTCGAGTTAGC 60.067 52.381 0.00 0.00 0.00 3.09
7211 7361 0.679505 AGTGCCTTGTCGAGTTAGCA 59.320 50.000 0.00 0.00 0.00 3.49
7212 7362 0.790814 GTGCCTTGTCGAGTTAGCAC 59.209 55.000 12.91 12.91 43.14 4.40
7213 7363 0.391228 TGCCTTGTCGAGTTAGCACA 59.609 50.000 0.00 0.00 0.00 4.57
7214 7364 0.790814 GCCTTGTCGAGTTAGCACAC 59.209 55.000 0.00 0.00 0.00 3.82
7215 7365 1.872237 GCCTTGTCGAGTTAGCACACA 60.872 52.381 0.00 0.00 0.00 3.72
7216 7366 2.061773 CCTTGTCGAGTTAGCACACAG 58.938 52.381 0.00 0.00 0.00 3.66
7217 7367 2.288213 CCTTGTCGAGTTAGCACACAGA 60.288 50.000 0.00 0.00 0.00 3.41
7218 7368 2.417339 TGTCGAGTTAGCACACAGAC 57.583 50.000 0.00 0.00 0.00 3.51
7219 7369 1.328439 GTCGAGTTAGCACACAGACG 58.672 55.000 0.00 0.00 0.00 4.18
7220 7370 0.949397 TCGAGTTAGCACACAGACGT 59.051 50.000 0.00 0.00 0.00 4.34
7221 7371 1.069432 TCGAGTTAGCACACAGACGTC 60.069 52.381 7.70 7.70 0.00 4.34
7222 7372 1.334689 CGAGTTAGCACACAGACGTCA 60.335 52.381 19.50 0.00 0.00 4.35
7223 7373 2.668556 CGAGTTAGCACACAGACGTCAT 60.669 50.000 19.50 1.85 0.00 3.06
7224 7374 2.917971 GAGTTAGCACACAGACGTCATC 59.082 50.000 19.50 0.00 0.00 2.92
7225 7375 1.649171 GTTAGCACACAGACGTCATCG 59.351 52.381 19.50 8.22 43.34 3.84
7237 7387 2.112475 CGTCATCGTCATCACCTCTC 57.888 55.000 0.00 0.00 0.00 3.20
7238 7388 1.268794 CGTCATCGTCATCACCTCTCC 60.269 57.143 0.00 0.00 0.00 3.71
7239 7389 1.067821 GTCATCGTCATCACCTCTCCC 59.932 57.143 0.00 0.00 0.00 4.30
7240 7390 0.390860 CATCGTCATCACCTCTCCCC 59.609 60.000 0.00 0.00 0.00 4.81
7241 7391 0.032117 ATCGTCATCACCTCTCCCCA 60.032 55.000 0.00 0.00 0.00 4.96
7242 7392 0.252057 TCGTCATCACCTCTCCCCAA 60.252 55.000 0.00 0.00 0.00 4.12
7243 7393 0.176680 CGTCATCACCTCTCCCCAAG 59.823 60.000 0.00 0.00 0.00 3.61
7244 7394 0.107459 GTCATCACCTCTCCCCAAGC 60.107 60.000 0.00 0.00 0.00 4.01
7245 7395 0.547471 TCATCACCTCTCCCCAAGCA 60.547 55.000 0.00 0.00 0.00 3.91
7246 7396 0.393537 CATCACCTCTCCCCAAGCAC 60.394 60.000 0.00 0.00 0.00 4.40
7247 7397 1.903877 ATCACCTCTCCCCAAGCACG 61.904 60.000 0.00 0.00 0.00 5.34
7248 7398 4.021925 ACCTCTCCCCAAGCACGC 62.022 66.667 0.00 0.00 0.00 5.34
7250 7400 4.379243 CTCTCCCCAAGCACGCGT 62.379 66.667 5.58 5.58 0.00 6.01
7251 7401 4.373116 TCTCCCCAAGCACGCGTC 62.373 66.667 9.86 4.43 0.00 5.19
7252 7402 4.680237 CTCCCCAAGCACGCGTCA 62.680 66.667 9.86 0.00 0.00 4.35
7253 7403 3.958147 CTCCCCAAGCACGCGTCAT 62.958 63.158 9.86 0.00 0.00 3.06
7254 7404 3.499737 CCCCAAGCACGCGTCATC 61.500 66.667 9.86 0.85 0.00 2.92
7255 7405 3.853330 CCCAAGCACGCGTCATCG 61.853 66.667 9.86 0.00 40.37 3.84
7256 7406 2.809174 CCAAGCACGCGTCATCGA 60.809 61.111 9.86 0.00 39.71 3.59
7257 7407 2.167219 CCAAGCACGCGTCATCGAT 61.167 57.895 9.86 0.00 39.71 3.59
7258 7408 1.012998 CAAGCACGCGTCATCGATG 60.013 57.895 19.61 19.61 39.71 3.84
7259 7409 2.802667 AAGCACGCGTCATCGATGC 61.803 57.895 20.81 8.38 44.88 3.91
7260 7410 4.285149 GCACGCGTCATCGATGCC 62.285 66.667 20.81 8.66 41.05 4.40
7261 7411 3.630148 CACGCGTCATCGATGCCC 61.630 66.667 20.81 12.06 41.05 5.36
7262 7412 4.891727 ACGCGTCATCGATGCCCC 62.892 66.667 20.81 9.63 41.05 5.80
7263 7413 4.592192 CGCGTCATCGATGCCCCT 62.592 66.667 20.81 0.00 41.05 4.79
7264 7414 2.734591 GCGTCATCGATGCCCCTA 59.265 61.111 20.81 0.00 38.50 3.53
7265 7415 1.069090 GCGTCATCGATGCCCCTAA 59.931 57.895 20.81 0.00 38.50 2.69
7266 7416 0.320771 GCGTCATCGATGCCCCTAAT 60.321 55.000 20.81 0.00 38.50 1.73
7267 7417 1.714794 CGTCATCGATGCCCCTAATC 58.285 55.000 20.81 2.88 39.71 1.75
7268 7418 1.673033 CGTCATCGATGCCCCTAATCC 60.673 57.143 20.81 0.00 39.71 3.01
7269 7419 0.984230 TCATCGATGCCCCTAATCCC 59.016 55.000 20.81 0.00 0.00 3.85
7270 7420 0.987294 CATCGATGCCCCTAATCCCT 59.013 55.000 13.37 0.00 0.00 4.20
7271 7421 0.987294 ATCGATGCCCCTAATCCCTG 59.013 55.000 0.00 0.00 0.00 4.45
7272 7422 0.105194 TCGATGCCCCTAATCCCTGA 60.105 55.000 0.00 0.00 0.00 3.86
7273 7423 0.322975 CGATGCCCCTAATCCCTGAG 59.677 60.000 0.00 0.00 0.00 3.35
7274 7424 0.037447 GATGCCCCTAATCCCTGAGC 59.963 60.000 0.00 0.00 0.00 4.26
7275 7425 0.698886 ATGCCCCTAATCCCTGAGCA 60.699 55.000 0.00 0.00 0.00 4.26
7276 7426 0.918799 TGCCCCTAATCCCTGAGCAA 60.919 55.000 0.00 0.00 0.00 3.91
7277 7427 0.179006 GCCCCTAATCCCTGAGCAAG 60.179 60.000 0.00 0.00 0.00 4.01
7278 7428 0.179006 CCCCTAATCCCTGAGCAAGC 60.179 60.000 0.00 0.00 0.00 4.01
7279 7429 0.533755 CCCTAATCCCTGAGCAAGCG 60.534 60.000 0.00 0.00 0.00 4.68
7280 7430 0.465705 CCTAATCCCTGAGCAAGCGA 59.534 55.000 0.00 0.00 0.00 4.93
7281 7431 1.576356 CTAATCCCTGAGCAAGCGAC 58.424 55.000 0.00 0.00 0.00 5.19
7282 7432 1.137872 CTAATCCCTGAGCAAGCGACT 59.862 52.381 0.00 0.00 0.00 4.18
7283 7433 0.107945 AATCCCTGAGCAAGCGACTC 60.108 55.000 0.00 0.00 34.62 3.36
7284 7434 1.965754 ATCCCTGAGCAAGCGACTCC 61.966 60.000 0.00 0.00 32.98 3.85
7285 7435 2.507992 CCTGAGCAAGCGACTCCG 60.508 66.667 0.00 0.00 39.16 4.63
7286 7436 2.568612 CTGAGCAAGCGACTCCGA 59.431 61.111 0.00 0.00 38.22 4.55
7287 7437 1.803519 CTGAGCAAGCGACTCCGAC 60.804 63.158 0.00 0.00 38.22 4.79
7288 7438 2.206515 CTGAGCAAGCGACTCCGACT 62.207 60.000 0.00 0.00 38.22 4.18
7289 7439 1.080434 GAGCAAGCGACTCCGACTT 60.080 57.895 0.00 0.00 38.22 3.01
7290 7440 1.073768 GAGCAAGCGACTCCGACTTC 61.074 60.000 0.00 0.00 38.22 3.01
7291 7441 2.437343 GCAAGCGACTCCGACTTCG 61.437 63.158 0.00 0.00 38.22 3.79
7295 7445 2.876645 CGACTCCGACTTCGCTGC 60.877 66.667 0.00 0.00 38.22 5.25
7296 7446 2.258591 GACTCCGACTTCGCTGCA 59.741 61.111 0.00 0.00 38.18 4.41
7297 7447 1.372997 GACTCCGACTTCGCTGCAA 60.373 57.895 0.00 0.00 38.18 4.08
7298 7448 0.944311 GACTCCGACTTCGCTGCAAA 60.944 55.000 0.00 0.00 38.18 3.68
7299 7449 1.222115 ACTCCGACTTCGCTGCAAAC 61.222 55.000 0.00 0.00 38.18 2.93
7300 7450 1.221466 CTCCGACTTCGCTGCAAACA 61.221 55.000 0.00 0.00 38.18 2.83
7301 7451 0.812014 TCCGACTTCGCTGCAAACAA 60.812 50.000 0.00 0.00 38.18 2.83
7302 7452 0.028770 CCGACTTCGCTGCAAACAAA 59.971 50.000 0.00 0.00 38.18 2.83
7303 7453 1.112459 CGACTTCGCTGCAAACAAAC 58.888 50.000 0.00 0.00 0.00 2.93
7304 7454 1.112459 GACTTCGCTGCAAACAAACG 58.888 50.000 0.00 0.00 0.00 3.60
7305 7455 0.450184 ACTTCGCTGCAAACAAACGT 59.550 45.000 0.00 0.00 0.00 3.99
7306 7456 1.112459 CTTCGCTGCAAACAAACGTC 58.888 50.000 0.00 0.00 0.00 4.34
7307 7457 0.587737 TTCGCTGCAAACAAACGTCG 60.588 50.000 0.00 0.00 0.00 5.12
7308 7458 1.011684 CGCTGCAAACAAACGTCGA 60.012 52.632 0.00 0.00 0.00 4.20
7309 7459 1.253044 CGCTGCAAACAAACGTCGAC 61.253 55.000 5.18 5.18 0.00 4.20
7310 7460 0.027586 GCTGCAAACAAACGTCGACT 59.972 50.000 14.70 0.00 0.00 4.18
7311 7461 1.915965 GCTGCAAACAAACGTCGACTC 60.916 52.381 14.70 0.00 0.00 3.36
7312 7462 1.326245 CTGCAAACAAACGTCGACTCA 59.674 47.619 14.70 0.00 0.00 3.41
7313 7463 1.732809 TGCAAACAAACGTCGACTCAA 59.267 42.857 14.70 0.00 0.00 3.02
7314 7464 2.098870 GCAAACAAACGTCGACTCAAC 58.901 47.619 14.70 0.00 0.00 3.18
7315 7465 2.700694 CAAACAAACGTCGACTCAACC 58.299 47.619 14.70 0.00 0.00 3.77
7316 7466 1.292992 AACAAACGTCGACTCAACCC 58.707 50.000 14.70 0.00 0.00 4.11
7317 7467 0.462789 ACAAACGTCGACTCAACCCT 59.537 50.000 14.70 0.00 0.00 4.34
7318 7468 1.137513 CAAACGTCGACTCAACCCTC 58.862 55.000 14.70 0.00 0.00 4.30
7319 7469 0.748450 AAACGTCGACTCAACCCTCA 59.252 50.000 14.70 0.00 0.00 3.86
7320 7470 0.031721 AACGTCGACTCAACCCTCAC 59.968 55.000 14.70 0.00 0.00 3.51
7321 7471 1.080705 CGTCGACTCAACCCTCACC 60.081 63.158 14.70 0.00 0.00 4.02
7322 7472 1.080705 GTCGACTCAACCCTCACCG 60.081 63.158 8.70 0.00 0.00 4.94
7323 7473 2.432628 CGACTCAACCCTCACCGC 60.433 66.667 0.00 0.00 0.00 5.68
7324 7474 2.741092 GACTCAACCCTCACCGCA 59.259 61.111 0.00 0.00 0.00 5.69
7325 7475 1.374758 GACTCAACCCTCACCGCAG 60.375 63.158 0.00 0.00 0.00 5.18
7326 7476 1.816863 GACTCAACCCTCACCGCAGA 61.817 60.000 0.00 0.00 0.00 4.26
7327 7477 1.371183 CTCAACCCTCACCGCAGAA 59.629 57.895 0.00 0.00 0.00 3.02
7328 7478 0.671781 CTCAACCCTCACCGCAGAAG 60.672 60.000 0.00 0.00 0.00 2.85
7329 7479 2.032681 AACCCTCACCGCAGAAGC 59.967 61.111 0.00 0.00 37.42 3.86
7330 7480 3.553095 AACCCTCACCGCAGAAGCC 62.553 63.158 0.00 0.00 37.52 4.35
7332 7482 4.379243 CCTCACCGCAGAAGCCGT 62.379 66.667 0.00 0.00 37.52 5.68
7333 7483 3.114616 CTCACCGCAGAAGCCGTG 61.115 66.667 3.17 3.17 46.78 4.94
7338 7488 3.043713 CGCAGAAGCCGTGCAGAA 61.044 61.111 0.00 0.00 41.26 3.02
7339 7489 2.606961 CGCAGAAGCCGTGCAGAAA 61.607 57.895 0.00 0.00 41.26 2.52
7340 7490 1.081840 GCAGAAGCCGTGCAGAAAC 60.082 57.895 0.00 0.00 40.86 2.78
7341 7491 1.785041 GCAGAAGCCGTGCAGAAACA 61.785 55.000 0.00 0.00 40.86 2.83
7342 7492 0.040958 CAGAAGCCGTGCAGAAACAC 60.041 55.000 0.00 0.00 37.19 3.32
7343 7493 0.463654 AGAAGCCGTGCAGAAACACA 60.464 50.000 0.00 0.00 40.73 3.72
7344 7494 0.593128 GAAGCCGTGCAGAAACACAT 59.407 50.000 0.00 0.00 40.73 3.21
7345 7495 0.311790 AAGCCGTGCAGAAACACATG 59.688 50.000 0.00 0.00 40.73 3.21
7346 7496 0.534877 AGCCGTGCAGAAACACATGA 60.535 50.000 0.00 0.00 40.73 3.07
7347 7497 0.310543 GCCGTGCAGAAACACATGAA 59.689 50.000 0.00 0.00 40.73 2.57
7348 7498 1.664016 GCCGTGCAGAAACACATGAAG 60.664 52.381 0.00 0.00 40.73 3.02
7349 7499 1.872952 CCGTGCAGAAACACATGAAGA 59.127 47.619 0.00 0.00 40.73 2.87
7350 7500 2.485426 CCGTGCAGAAACACATGAAGAT 59.515 45.455 0.00 0.00 40.73 2.40
7351 7501 3.425359 CCGTGCAGAAACACATGAAGATC 60.425 47.826 0.00 0.00 40.73 2.75
7352 7502 3.425359 CGTGCAGAAACACATGAAGATCC 60.425 47.826 0.00 0.00 40.73 3.36
7353 7503 3.755378 GTGCAGAAACACATGAAGATCCT 59.245 43.478 0.00 0.00 40.40 3.24
7354 7504 3.754850 TGCAGAAACACATGAAGATCCTG 59.245 43.478 0.00 0.75 0.00 3.86
7355 7505 3.427233 GCAGAAACACATGAAGATCCTGC 60.427 47.826 0.00 7.30 37.85 4.85
7356 7506 3.128242 CAGAAACACATGAAGATCCTGCC 59.872 47.826 0.00 0.00 0.00 4.85
7357 7507 2.885135 AACACATGAAGATCCTGCCA 57.115 45.000 0.00 0.00 0.00 4.92
7358 7508 2.414994 ACACATGAAGATCCTGCCAG 57.585 50.000 0.00 0.00 0.00 4.85
7359 7509 1.911357 ACACATGAAGATCCTGCCAGA 59.089 47.619 0.00 0.00 0.00 3.86
7360 7510 2.306805 ACACATGAAGATCCTGCCAGAA 59.693 45.455 0.00 0.00 0.00 3.02
7361 7511 2.681848 CACATGAAGATCCTGCCAGAAC 59.318 50.000 0.00 0.00 0.00 3.01
7362 7512 2.575279 ACATGAAGATCCTGCCAGAACT 59.425 45.455 0.00 0.00 0.00 3.01
7363 7513 3.009916 ACATGAAGATCCTGCCAGAACTT 59.990 43.478 0.00 0.00 32.17 2.66
7364 7514 4.225942 ACATGAAGATCCTGCCAGAACTTA 59.774 41.667 0.00 0.00 29.91 2.24
7365 7515 4.478206 TGAAGATCCTGCCAGAACTTAG 57.522 45.455 0.00 0.00 29.91 2.18
7366 7516 2.998316 AGATCCTGCCAGAACTTAGC 57.002 50.000 0.00 0.00 0.00 3.09
7367 7517 1.488393 AGATCCTGCCAGAACTTAGCC 59.512 52.381 0.00 0.00 0.00 3.93
7368 7518 1.210478 GATCCTGCCAGAACTTAGCCA 59.790 52.381 0.00 0.00 0.00 4.75
7369 7519 0.324943 TCCTGCCAGAACTTAGCCAC 59.675 55.000 0.00 0.00 0.00 5.01
7370 7520 0.678048 CCTGCCAGAACTTAGCCACC 60.678 60.000 0.00 0.00 0.00 4.61
7371 7521 0.326264 CTGCCAGAACTTAGCCACCT 59.674 55.000 0.00 0.00 0.00 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
122 131 2.226912 TCAACCTAAACAAAATCGCCGG 59.773 45.455 0.00 0.00 0.00 6.13
230 239 0.178964 ACCCCCAAATGGTCACACAG 60.179 55.000 0.00 0.00 0.00 3.66
234 243 1.074889 ACAGTACCCCCAAATGGTCAC 59.925 52.381 0.00 0.00 37.31 3.67
287 300 8.762481 AGGATTAACTTGAAAACAGGTAAAGT 57.238 30.769 0.00 0.00 32.60 2.66
328 341 1.534729 GGAGAAATCAAACTGCGGGT 58.465 50.000 0.00 0.00 0.00 5.28
362 376 4.577283 AGAACGCTAAAACTGCAAAAGGTA 59.423 37.500 0.00 0.00 0.00 3.08
663 680 0.876342 CCGCATTACCGAGAAGCCTC 60.876 60.000 0.00 0.00 36.08 4.70
695 712 2.241281 TTCCCTCTACGGTTCATCCA 57.759 50.000 0.00 0.00 35.57 3.41
723 740 3.542712 TCGACAAAGAGCTTGCAAATC 57.457 42.857 0.00 1.59 38.75 2.17
738 755 3.058293 GTGTTGGCAATGAGAATTCGACA 60.058 43.478 1.92 9.91 0.00 4.35
786 803 5.851047 TCAAGCTACATAATCATCATGCG 57.149 39.130 0.00 0.00 0.00 4.73
848 865 2.738139 CGCGGCACACACTCATGA 60.738 61.111 0.00 0.00 0.00 3.07
864 881 2.146342 AGAATTGTCAAGAGTGGCACG 58.854 47.619 12.71 0.00 39.68 5.34
951 969 7.286316 AGCAATAGAACTGAAATAGGGGAAATG 59.714 37.037 0.00 0.00 0.00 2.32
956 974 6.122277 TGAAGCAATAGAACTGAAATAGGGG 58.878 40.000 0.00 0.00 0.00 4.79
979 1000 2.028112 TGGTAGCTCAAGCCAGTACTTG 60.028 50.000 0.00 0.00 46.86 3.16
1181 1205 4.406456 AGACATTTCACAAGCCCACATAA 58.594 39.130 0.00 0.00 0.00 1.90
1200 1224 6.018180 ACTGACTTATTTCGGTGTTTCAAGAC 60.018 38.462 0.00 0.00 33.60 3.01
1225 1249 8.585471 AAGCAAATGAGATTTAAGATCAAGGA 57.415 30.769 0.00 0.00 0.00 3.36
1238 1262 9.186837 ACAGAATAATCTTGAAGCAAATGAGAT 57.813 29.630 0.00 0.00 32.03 2.75
1332 1356 3.465871 TGGCCTTTCATTCAAAAACAGC 58.534 40.909 3.32 0.00 0.00 4.40
1591 1616 7.439381 ACAGCAAGACAAAGATGAAATGATTT 58.561 30.769 0.00 0.00 0.00 2.17
1612 1637 7.064060 ACATTTAATTTGCAAAGCATACAGC 57.936 32.000 18.19 0.00 46.19 4.40
1682 1707 8.942669 TTGTATGAAATGAACGACAATACAAC 57.057 30.769 12.92 0.00 35.44 3.32
1685 1710 9.864034 CCTATTGTATGAAATGAACGACAATAC 57.136 33.333 0.00 0.00 38.24 1.89
1686 1711 8.556194 GCCTATTGTATGAAATGAACGACAATA 58.444 33.333 0.00 0.00 38.24 1.90
1687 1712 7.066887 TGCCTATTGTATGAAATGAACGACAAT 59.933 33.333 0.00 0.00 39.91 2.71
1688 1713 6.372937 TGCCTATTGTATGAAATGAACGACAA 59.627 34.615 0.00 0.00 0.00 3.18
1689 1714 5.877564 TGCCTATTGTATGAAATGAACGACA 59.122 36.000 0.00 0.00 0.00 4.35
1690 1715 6.183360 TGTGCCTATTGTATGAAATGAACGAC 60.183 38.462 0.00 0.00 0.00 4.34
1691 1716 5.877564 TGTGCCTATTGTATGAAATGAACGA 59.122 36.000 0.00 0.00 0.00 3.85
1692 1717 6.117911 TGTGCCTATTGTATGAAATGAACG 57.882 37.500 0.00 0.00 0.00 3.95
2042 2075 6.714810 TGCCGCATTATATGGAGATAAAAAGT 59.285 34.615 0.00 0.00 0.00 2.66
2083 2116 3.244044 TGCAATTGTAAAACAGAAGCCCC 60.244 43.478 7.40 0.00 0.00 5.80
2287 2320 6.033966 GCAGAAACCCATATTTACCTTTTCG 58.966 40.000 0.00 0.00 0.00 3.46
2402 2435 4.273148 ACTCGTTTGCCTTAGAATCTGT 57.727 40.909 0.00 0.00 0.00 3.41
2419 2452 3.694072 TCCATATTGCCCAAGAAAACTCG 59.306 43.478 0.00 0.00 0.00 4.18
2551 2584 1.338020 GCTTGTTCCCAGTGTTGAAGG 59.662 52.381 0.00 0.00 0.00 3.46
2555 2588 0.670162 CTGGCTTGTTCCCAGTGTTG 59.330 55.000 0.00 0.00 43.86 3.33
2571 2604 3.278574 TGAGTGGTTCTTGTTTGACTGG 58.721 45.455 0.00 0.00 0.00 4.00
2597 2630 4.520492 CCCATGGCCAAGAATATTGTCTAC 59.480 45.833 10.96 0.00 0.00 2.59
2602 2635 4.154176 TGATCCCATGGCCAAGAATATTG 58.846 43.478 10.96 0.18 0.00 1.90
2625 2658 9.588096 TTTTAGTGGCTGATATCTGTCTAGATA 57.412 33.333 14.35 0.00 46.84 1.98
2633 2666 3.496130 CGGCTTTTAGTGGCTGATATCTG 59.504 47.826 3.98 4.68 37.02 2.90
2751 2879 2.567169 TGTCACTAGGTGGGAGAATGTG 59.433 50.000 0.00 0.00 33.87 3.21
2820 2948 9.772973 GTTACATTGGTGGTATGTATCTATTCA 57.227 33.333 0.00 0.00 38.05 2.57
2977 3108 2.843643 CCGAACCAAATTAATTGTCGCG 59.156 45.455 0.00 0.00 36.64 5.87
2994 3125 4.773674 TGAAATAAGTGTACTCCCTCCGAA 59.226 41.667 0.00 0.00 0.00 4.30
3021 3152 7.706607 ACAAAAGCCAGAAAAGAACAACTTATC 59.293 33.333 0.00 0.00 37.93 1.75
3047 3178 3.776969 AGGGAGACATGCAGAGAATTACA 59.223 43.478 0.00 0.00 0.00 2.41
3085 3216 4.592485 ACAGCTTCTTCTTCTCTCGAAA 57.408 40.909 0.00 0.00 0.00 3.46
3274 3405 9.605275 TTGCTTAGCCATATATGACAATATCTC 57.395 33.333 14.54 0.00 31.27 2.75
3331 3462 0.173708 GGAGTCAGTAGTTGGAGGCG 59.826 60.000 0.00 0.00 0.00 5.52
3382 3513 0.601046 GCTTTTGGCAAACCTGAGGC 60.601 55.000 13.10 0.00 41.35 4.70
3486 3617 6.311200 CACATTTTAAAAGGCTGGTAGCAATC 59.689 38.462 12.27 0.00 44.75 2.67
3495 3626 4.152759 CCATGTGCACATTTTAAAAGGCTG 59.847 41.667 29.48 14.84 33.61 4.85
3510 3641 8.039538 TGAATGCTAAATTAAATTCCATGTGCA 58.960 29.630 0.00 0.00 0.00 4.57
3605 3737 6.820335 AGTATGATCATAGTACAGCTTTGCA 58.180 36.000 19.50 0.00 0.00 4.08
3620 3752 4.584743 AGGTTGACGCATAGAGTATGATCA 59.415 41.667 0.00 0.00 38.45 2.92
3672 3805 4.775780 AGTATGGTCTTAGTACAGGTTGCA 59.224 41.667 0.00 0.00 0.00 4.08
3893 4027 2.737252 GGCTACCAGTTCTTCTTTGACG 59.263 50.000 0.00 0.00 0.00 4.35
3903 4037 1.730612 GCGTAAGTTGGCTACCAGTTC 59.269 52.381 0.00 0.00 41.68 3.01
3944 4078 6.942005 TCTGAACATCCTCTGCTTTTGATAAA 59.058 34.615 0.00 0.00 0.00 1.40
3956 4090 9.525826 AACAAAAGAAATATCTGAACATCCTCT 57.474 29.630 0.00 0.00 35.59 3.69
4207 4347 4.088634 ACAATCAACACATACCAAGCCAT 58.911 39.130 0.00 0.00 0.00 4.40
4222 4362 5.687770 ACAACGATGATGTCAACAATCAA 57.312 34.783 0.00 0.00 0.00 2.57
4296 4436 5.530915 CCAGGATTATTATTGCAAACTCCGA 59.469 40.000 1.71 0.00 0.00 4.55
4298 4438 6.715347 ACCAGGATTATTATTGCAAACTCC 57.285 37.500 1.71 0.00 0.00 3.85
4523 4663 5.570205 TTGGTCTAAGTGGTGGTAATTCA 57.430 39.130 0.00 0.00 0.00 2.57
4619 4759 5.779771 TCCATTTACTTCTGAGGCCATTTTT 59.220 36.000 5.01 0.00 0.00 1.94
4673 4813 9.109393 GATCCTTGTGAAACTACATTAGCATAA 57.891 33.333 0.00 0.00 38.04 1.90
4683 4823 4.113354 CCGCTAGATCCTTGTGAAACTAC 58.887 47.826 0.00 0.00 38.04 2.73
4849 4989 4.351874 ACTACTTGTCCTGCAGCTTTAA 57.648 40.909 8.66 0.00 0.00 1.52
4891 5031 2.614481 CCGGCAGCTTTAGACCTTGTAA 60.614 50.000 0.00 0.00 0.00 2.41
4910 5050 2.289195 TGTCCAACTAACTACTTGCCCG 60.289 50.000 0.00 0.00 0.00 6.13
4913 5053 6.109359 AGATGATGTCCAACTAACTACTTGC 58.891 40.000 0.00 0.00 0.00 4.01
4949 5089 3.710209 ACTTGTCCTGCAGCTTTAGAT 57.290 42.857 8.66 0.00 0.00 1.98
5035 5178 7.651304 CAGCTTTAGACCTTGTATCAGTAGATG 59.349 40.741 0.00 0.00 35.67 2.90
5036 5179 7.685641 GCAGCTTTAGACCTTGTATCAGTAGAT 60.686 40.741 0.00 0.00 38.29 1.98
5037 5180 6.405953 GCAGCTTTAGACCTTGTATCAGTAGA 60.406 42.308 0.00 0.00 0.00 2.59
5339 5482 1.948145 CATGCATTCTTCTCCTCTGCC 59.052 52.381 0.00 0.00 31.89 4.85
5453 5596 0.535335 GGAGCACGGTAGGAATGACA 59.465 55.000 0.00 0.00 0.00 3.58
5479 5622 4.510340 GTGACACACCGTTAGAACTTGAAT 59.490 41.667 0.00 0.00 0.00 2.57
5492 5635 1.422388 CTGATGTCTGTGACACACCG 58.578 55.000 3.56 0.00 45.65 4.94
5757 5900 0.250513 CTGACTGGTCTTGGTAGCCC 59.749 60.000 2.38 0.00 0.00 5.19
5866 6009 3.386078 TGAGGAGCTCATTGATACAGACC 59.614 47.826 17.19 0.00 35.39 3.85
5984 6127 1.202903 GCTCCATCATCTTCCAGGCAT 60.203 52.381 0.00 0.00 0.00 4.40
6004 6147 5.116180 TCACACCACTACTTTCTTTGTGAG 58.884 41.667 0.00 0.00 37.54 3.51
6012 6155 5.665459 AGATATGCTCACACCACTACTTTC 58.335 41.667 0.00 0.00 0.00 2.62
6315 6458 1.227943 GTGCACTGTTCAGGCCTGA 60.228 57.895 32.00 32.00 37.91 3.86
6335 6478 5.505181 ACATGGAGTATGAAAGGTCAACT 57.495 39.130 0.00 0.00 39.21 3.16
6396 6539 5.186198 GTGCATCTGTATTGTTAGGGACTT 58.814 41.667 0.00 0.00 41.75 3.01
6397 6540 4.225042 TGTGCATCTGTATTGTTAGGGACT 59.775 41.667 0.00 0.00 46.37 3.85
6398 6541 4.513442 TGTGCATCTGTATTGTTAGGGAC 58.487 43.478 0.00 0.00 0.00 4.46
6399 6542 4.835284 TGTGCATCTGTATTGTTAGGGA 57.165 40.909 0.00 0.00 0.00 4.20
6400 6543 4.943705 ACTTGTGCATCTGTATTGTTAGGG 59.056 41.667 0.00 0.00 0.00 3.53
6401 6544 5.643348 TGACTTGTGCATCTGTATTGTTAGG 59.357 40.000 0.00 0.00 0.00 2.69
6402 6545 6.726258 TGACTTGTGCATCTGTATTGTTAG 57.274 37.500 0.00 0.00 0.00 2.34
6403 6546 6.403527 GCATGACTTGTGCATCTGTATTGTTA 60.404 38.462 0.00 0.00 42.08 2.41
6567 6711 2.591133 TCGGCAAATTTTCGCTAAAGC 58.409 42.857 5.98 0.00 37.78 3.51
6611 6755 3.530265 AAATCGGCCATACTACACGAA 57.470 42.857 2.24 0.00 37.11 3.85
6666 6811 2.561569 CAAGGACGACAAAGACCAAGT 58.438 47.619 0.00 0.00 0.00 3.16
6667 6812 1.873591 CCAAGGACGACAAAGACCAAG 59.126 52.381 0.00 0.00 0.00 3.61
6668 6813 1.961793 CCAAGGACGACAAAGACCAA 58.038 50.000 0.00 0.00 0.00 3.67
6669 6814 0.534203 GCCAAGGACGACAAAGACCA 60.534 55.000 0.00 0.00 0.00 4.02
6722 6867 4.711846 ACACTAGCAATCATGTGTCCTAGA 59.288 41.667 15.11 0.00 39.09 2.43
6724 6869 6.462909 CCATACACTAGCAATCATGTGTCCTA 60.463 42.308 0.00 0.00 41.87 2.94
6768 6918 9.662947 AATACAGTTTACGATTTAGGCTAGTTT 57.337 29.630 0.00 0.00 0.00 2.66
6810 6960 2.503331 TGCTTTTGGCGATCAGAGAAA 58.497 42.857 0.00 0.00 45.43 2.52
6884 7034 2.785269 AGGAGGGGCATGTCATGATAAA 59.215 45.455 17.24 0.00 0.00 1.40
7000 7150 2.229784 GCAATTCTACTTTGCACCAGCT 59.770 45.455 3.68 0.00 46.78 4.24
7012 7162 4.635765 TGGCACATTGACTAGCAATTCTAC 59.364 41.667 8.96 3.58 44.68 2.59
7013 7163 4.842574 TGGCACATTGACTAGCAATTCTA 58.157 39.130 8.96 0.42 44.68 2.10
7014 7164 3.689347 TGGCACATTGACTAGCAATTCT 58.311 40.909 8.96 0.00 44.68 2.40
7044 7194 3.128938 TCTTTTGCCTCCGTTTCGAAAAA 59.871 39.130 13.10 0.00 0.00 1.94
7045 7195 2.683867 TCTTTTGCCTCCGTTTCGAAAA 59.316 40.909 13.10 0.00 0.00 2.29
7046 7196 2.290464 TCTTTTGCCTCCGTTTCGAAA 58.710 42.857 6.47 6.47 0.00 3.46
7047 7197 1.956297 TCTTTTGCCTCCGTTTCGAA 58.044 45.000 0.00 0.00 0.00 3.71
7048 7198 2.178912 ATCTTTTGCCTCCGTTTCGA 57.821 45.000 0.00 0.00 0.00 3.71
7049 7199 2.979813 CAAATCTTTTGCCTCCGTTTCG 59.020 45.455 0.00 0.00 0.00 3.46
7050 7200 2.731451 GCAAATCTTTTGCCTCCGTTTC 59.269 45.455 12.74 0.00 39.38 2.78
7051 7201 2.754472 GCAAATCTTTTGCCTCCGTTT 58.246 42.857 12.74 0.00 39.38 3.60
7052 7202 2.438868 GCAAATCTTTTGCCTCCGTT 57.561 45.000 12.74 0.00 39.38 4.44
7059 7209 3.598019 TGGATGAGGCAAATCTTTTGC 57.402 42.857 14.88 14.88 44.22 3.68
7060 7210 8.726870 ATTTAATGGATGAGGCAAATCTTTTG 57.273 30.769 0.00 0.00 0.00 2.44
7063 7213 8.146412 GCTTATTTAATGGATGAGGCAAATCTT 58.854 33.333 0.00 0.00 0.00 2.40
7064 7214 7.288389 TGCTTATTTAATGGATGAGGCAAATCT 59.712 33.333 0.00 0.00 0.00 2.40
7065 7215 7.436118 TGCTTATTTAATGGATGAGGCAAATC 58.564 34.615 0.00 0.00 0.00 2.17
7066 7216 7.288389 TCTGCTTATTTAATGGATGAGGCAAAT 59.712 33.333 0.00 0.00 0.00 2.32
7067 7217 6.606796 TCTGCTTATTTAATGGATGAGGCAAA 59.393 34.615 0.00 0.00 0.00 3.68
7068 7218 6.128486 TCTGCTTATTTAATGGATGAGGCAA 58.872 36.000 0.00 0.00 0.00 4.52
7069 7219 5.693961 TCTGCTTATTTAATGGATGAGGCA 58.306 37.500 0.00 0.00 0.00 4.75
7070 7220 6.488006 TCTTCTGCTTATTTAATGGATGAGGC 59.512 38.462 0.00 0.00 0.00 4.70
7071 7221 7.935755 TCTCTTCTGCTTATTTAATGGATGAGG 59.064 37.037 0.00 0.00 0.00 3.86
7072 7222 8.899427 TCTCTTCTGCTTATTTAATGGATGAG 57.101 34.615 0.00 0.00 0.00 2.90
7073 7223 9.857656 ATTCTCTTCTGCTTATTTAATGGATGA 57.142 29.630 0.00 0.00 0.00 2.92
7076 7226 8.408601 GCAATTCTCTTCTGCTTATTTAATGGA 58.591 33.333 0.00 0.00 33.20 3.41
7077 7227 7.650903 GGCAATTCTCTTCTGCTTATTTAATGG 59.349 37.037 0.00 0.00 36.32 3.16
7078 7228 7.650903 GGGCAATTCTCTTCTGCTTATTTAATG 59.349 37.037 0.00 0.00 36.32 1.90
7079 7229 7.469181 CGGGCAATTCTCTTCTGCTTATTTAAT 60.469 37.037 0.00 0.00 36.32 1.40
7080 7230 6.183360 CGGGCAATTCTCTTCTGCTTATTTAA 60.183 38.462 0.00 0.00 36.32 1.52
7081 7231 5.296780 CGGGCAATTCTCTTCTGCTTATTTA 59.703 40.000 0.00 0.00 36.32 1.40
7082 7232 4.096984 CGGGCAATTCTCTTCTGCTTATTT 59.903 41.667 0.00 0.00 36.32 1.40
7083 7233 3.629398 CGGGCAATTCTCTTCTGCTTATT 59.371 43.478 0.00 0.00 36.32 1.40
7084 7234 3.209410 CGGGCAATTCTCTTCTGCTTAT 58.791 45.455 0.00 0.00 36.32 1.73
7085 7235 2.632377 CGGGCAATTCTCTTCTGCTTA 58.368 47.619 0.00 0.00 36.32 3.09
7086 7236 1.457346 CGGGCAATTCTCTTCTGCTT 58.543 50.000 0.00 0.00 36.32 3.91
7087 7237 0.393537 CCGGGCAATTCTCTTCTGCT 60.394 55.000 0.00 0.00 36.32 4.24
7088 7238 0.678048 ACCGGGCAATTCTCTTCTGC 60.678 55.000 6.32 0.00 35.28 4.26
7089 7239 1.826385 AACCGGGCAATTCTCTTCTG 58.174 50.000 6.32 0.00 0.00 3.02
7090 7240 3.713826 TTAACCGGGCAATTCTCTTCT 57.286 42.857 6.32 0.00 0.00 2.85
7091 7241 4.983671 AATTAACCGGGCAATTCTCTTC 57.016 40.909 6.32 0.00 0.00 2.87
7092 7242 5.163550 GCTAAATTAACCGGGCAATTCTCTT 60.164 40.000 6.32 0.00 0.00 2.85
7093 7243 4.338400 GCTAAATTAACCGGGCAATTCTCT 59.662 41.667 6.32 0.00 0.00 3.10
7094 7244 4.607955 GCTAAATTAACCGGGCAATTCTC 58.392 43.478 6.32 0.74 0.00 2.87
7095 7245 3.066203 CGCTAAATTAACCGGGCAATTCT 59.934 43.478 6.32 5.00 0.00 2.40
7096 7246 3.368495 CGCTAAATTAACCGGGCAATTC 58.632 45.455 6.32 0.00 0.00 2.17
7097 7247 2.100087 CCGCTAAATTAACCGGGCAATT 59.900 45.455 6.32 8.10 37.21 2.32
7098 7248 1.679153 CCGCTAAATTAACCGGGCAAT 59.321 47.619 6.32 0.96 37.21 3.56
7099 7249 1.096416 CCGCTAAATTAACCGGGCAA 58.904 50.000 6.32 0.00 37.21 4.52
7100 7250 0.252479 TCCGCTAAATTAACCGGGCA 59.748 50.000 6.32 0.00 41.02 5.36
7101 7251 1.381522 TTCCGCTAAATTAACCGGGC 58.618 50.000 6.32 0.00 41.02 6.13
7102 7252 3.427909 GGTTTTCCGCTAAATTAACCGGG 60.428 47.826 6.32 0.00 41.02 5.73
7103 7253 3.761657 GGTTTTCCGCTAAATTAACCGG 58.238 45.455 0.00 0.00 41.97 5.28
7117 7267 1.007038 GGTTTTCGCCCGGTTTTCC 60.007 57.895 0.00 0.00 0.00 3.13
7118 7268 0.315886 ATGGTTTTCGCCCGGTTTTC 59.684 50.000 0.00 0.00 0.00 2.29
7119 7269 0.315886 GATGGTTTTCGCCCGGTTTT 59.684 50.000 0.00 0.00 0.00 2.43
7120 7270 0.824182 TGATGGTTTTCGCCCGGTTT 60.824 50.000 0.00 0.00 0.00 3.27
7121 7271 1.228306 TGATGGTTTTCGCCCGGTT 60.228 52.632 0.00 0.00 0.00 4.44
7122 7272 1.969589 GTGATGGTTTTCGCCCGGT 60.970 57.895 0.00 0.00 0.00 5.28
7123 7273 1.519751 TTGTGATGGTTTTCGCCCGG 61.520 55.000 0.00 0.00 0.00 5.73
7124 7274 0.525761 ATTGTGATGGTTTTCGCCCG 59.474 50.000 0.00 0.00 0.00 6.13
7125 7275 1.818674 AGATTGTGATGGTTTTCGCCC 59.181 47.619 0.00 0.00 0.00 6.13
7126 7276 2.867429 CAGATTGTGATGGTTTTCGCC 58.133 47.619 0.00 0.00 0.00 5.54
7127 7277 2.095059 AGCAGATTGTGATGGTTTTCGC 60.095 45.455 0.00 0.00 0.00 4.70
7128 7278 3.189080 TCAGCAGATTGTGATGGTTTTCG 59.811 43.478 0.00 0.00 43.22 3.46
7129 7279 4.771590 TCAGCAGATTGTGATGGTTTTC 57.228 40.909 0.00 0.00 43.22 2.29
7130 7280 5.475719 CATTCAGCAGATTGTGATGGTTTT 58.524 37.500 0.00 0.00 43.22 2.43
7131 7281 4.081862 CCATTCAGCAGATTGTGATGGTTT 60.082 41.667 0.00 0.00 43.22 3.27
7132 7282 3.446161 CCATTCAGCAGATTGTGATGGTT 59.554 43.478 0.00 0.00 43.22 3.67
7133 7283 3.021695 CCATTCAGCAGATTGTGATGGT 58.978 45.455 0.00 0.00 43.22 3.55
7134 7284 2.223735 GCCATTCAGCAGATTGTGATGG 60.224 50.000 0.00 3.11 43.22 3.51
7135 7285 2.540973 CGCCATTCAGCAGATTGTGATG 60.541 50.000 0.00 0.00 44.48 3.07
7136 7286 1.674441 CGCCATTCAGCAGATTGTGAT 59.326 47.619 1.12 0.00 0.00 3.06
7137 7287 1.089112 CGCCATTCAGCAGATTGTGA 58.911 50.000 1.12 0.00 0.00 3.58
7138 7288 0.524816 GCGCCATTCAGCAGATTGTG 60.525 55.000 0.00 0.00 0.00 3.33
7139 7289 0.961857 TGCGCCATTCAGCAGATTGT 60.962 50.000 4.18 0.00 38.59 2.71
7140 7290 1.804598 TGCGCCATTCAGCAGATTG 59.195 52.632 4.18 0.00 38.59 2.67
7141 7291 4.324471 TGCGCCATTCAGCAGATT 57.676 50.000 4.18 0.00 38.59 2.40
7146 7296 2.159393 TCTTTTGTATGCGCCATTCAGC 60.159 45.455 4.18 0.00 0.00 4.26
7147 7297 3.763097 TCTTTTGTATGCGCCATTCAG 57.237 42.857 4.18 0.00 0.00 3.02
7148 7298 4.036262 GGTATCTTTTGTATGCGCCATTCA 59.964 41.667 4.18 0.00 0.00 2.57
7149 7299 4.537015 GGTATCTTTTGTATGCGCCATTC 58.463 43.478 4.18 0.00 0.00 2.67
7150 7300 3.317993 GGGTATCTTTTGTATGCGCCATT 59.682 43.478 4.18 0.00 0.00 3.16
7151 7301 2.884639 GGGTATCTTTTGTATGCGCCAT 59.115 45.455 4.18 0.63 0.00 4.40
7152 7302 2.294074 GGGTATCTTTTGTATGCGCCA 58.706 47.619 4.18 0.00 0.00 5.69
7153 7303 1.607148 GGGGTATCTTTTGTATGCGCC 59.393 52.381 4.18 0.00 35.51 6.53
7154 7304 2.032924 GTGGGGTATCTTTTGTATGCGC 59.967 50.000 0.00 0.00 0.00 6.09
7155 7305 3.064820 GTGTGGGGTATCTTTTGTATGCG 59.935 47.826 0.00 0.00 0.00 4.73
7156 7306 4.013728 TGTGTGGGGTATCTTTTGTATGC 58.986 43.478 0.00 0.00 0.00 3.14
7157 7307 5.007034 TGTGTGTGGGGTATCTTTTGTATG 58.993 41.667 0.00 0.00 0.00 2.39
7158 7308 5.007682 GTGTGTGTGGGGTATCTTTTGTAT 58.992 41.667 0.00 0.00 0.00 2.29
7159 7309 4.391155 GTGTGTGTGGGGTATCTTTTGTA 58.609 43.478 0.00 0.00 0.00 2.41
7160 7310 3.219281 GTGTGTGTGGGGTATCTTTTGT 58.781 45.455 0.00 0.00 0.00 2.83
7161 7311 2.556622 GGTGTGTGTGGGGTATCTTTTG 59.443 50.000 0.00 0.00 0.00 2.44
7162 7312 2.445525 AGGTGTGTGTGGGGTATCTTTT 59.554 45.455 0.00 0.00 0.00 2.27
7163 7313 2.062636 AGGTGTGTGTGGGGTATCTTT 58.937 47.619 0.00 0.00 0.00 2.52
7164 7314 1.742308 AGGTGTGTGTGGGGTATCTT 58.258 50.000 0.00 0.00 0.00 2.40
7165 7315 2.634639 TAGGTGTGTGTGGGGTATCT 57.365 50.000 0.00 0.00 0.00 1.98
7166 7316 3.243636 CGTATAGGTGTGTGTGGGGTATC 60.244 52.174 0.00 0.00 0.00 2.24
7167 7317 2.696707 CGTATAGGTGTGTGTGGGGTAT 59.303 50.000 0.00 0.00 0.00 2.73
7168 7318 2.101783 CGTATAGGTGTGTGTGGGGTA 58.898 52.381 0.00 0.00 0.00 3.69
7169 7319 0.899720 CGTATAGGTGTGTGTGGGGT 59.100 55.000 0.00 0.00 0.00 4.95
7170 7320 0.177141 CCGTATAGGTGTGTGTGGGG 59.823 60.000 0.00 0.00 34.51 4.96
7171 7321 1.136305 CTCCGTATAGGTGTGTGTGGG 59.864 57.143 0.00 0.00 41.99 4.61
7172 7322 2.097036 TCTCCGTATAGGTGTGTGTGG 58.903 52.381 0.00 0.00 41.99 4.17
7173 7323 2.753452 ACTCTCCGTATAGGTGTGTGTG 59.247 50.000 0.00 0.00 38.37 3.82
7174 7324 2.753452 CACTCTCCGTATAGGTGTGTGT 59.247 50.000 11.11 3.32 45.50 3.72
7175 7325 3.422417 CACTCTCCGTATAGGTGTGTG 57.578 52.381 6.92 6.92 45.41 3.82
7176 7326 1.749634 GCACTCTCCGTATAGGTGTGT 59.250 52.381 0.00 0.92 39.82 3.72
7177 7327 1.067212 GGCACTCTCCGTATAGGTGTG 59.933 57.143 0.00 0.00 41.99 3.82
7178 7328 1.063867 AGGCACTCTCCGTATAGGTGT 60.064 52.381 0.00 0.00 41.99 4.16
7179 7329 1.693627 AGGCACTCTCCGTATAGGTG 58.306 55.000 0.00 0.00 41.99 4.00
7180 7330 2.032620 CAAGGCACTCTCCGTATAGGT 58.967 52.381 0.00 0.00 38.49 3.08
7181 7331 2.032620 ACAAGGCACTCTCCGTATAGG 58.967 52.381 0.00 0.00 38.49 2.57
7182 7332 2.287069 CGACAAGGCACTCTCCGTATAG 60.287 54.545 0.00 0.00 38.49 1.31
7183 7333 1.674441 CGACAAGGCACTCTCCGTATA 59.326 52.381 0.00 0.00 38.49 1.47
7184 7334 0.456221 CGACAAGGCACTCTCCGTAT 59.544 55.000 0.00 0.00 38.49 3.06
7185 7335 0.607217 TCGACAAGGCACTCTCCGTA 60.607 55.000 0.00 0.00 38.49 4.02
7186 7336 1.867919 CTCGACAAGGCACTCTCCGT 61.868 60.000 0.00 0.00 38.49 4.69
7187 7337 1.153939 CTCGACAAGGCACTCTCCG 60.154 63.158 0.00 0.00 38.49 4.63
7188 7338 0.318762 AACTCGACAAGGCACTCTCC 59.681 55.000 0.00 0.00 38.49 3.71
7189 7339 2.869897 CTAACTCGACAAGGCACTCTC 58.130 52.381 0.00 0.00 38.49 3.20
7190 7340 1.067495 GCTAACTCGACAAGGCACTCT 60.067 52.381 0.00 0.00 38.49 3.24
7191 7341 1.336887 TGCTAACTCGACAAGGCACTC 60.337 52.381 0.00 0.00 38.49 3.51
7192 7342 1.605712 GTGCTAACTCGACAAGGCACT 60.606 52.381 16.44 0.00 44.20 4.40
7193 7343 0.790814 GTGCTAACTCGACAAGGCAC 59.209 55.000 11.24 11.24 42.04 5.01
7194 7344 0.391228 TGTGCTAACTCGACAAGGCA 59.609 50.000 0.00 0.00 0.00 4.75
7195 7345 0.790814 GTGTGCTAACTCGACAAGGC 59.209 55.000 0.00 0.00 0.00 4.35
7196 7346 2.061773 CTGTGTGCTAACTCGACAAGG 58.938 52.381 0.00 0.00 0.00 3.61
7197 7347 2.726760 GTCTGTGTGCTAACTCGACAAG 59.273 50.000 0.00 0.00 0.00 3.16
7198 7348 2.739292 GTCTGTGTGCTAACTCGACAA 58.261 47.619 0.00 0.00 0.00 3.18
7199 7349 1.334689 CGTCTGTGTGCTAACTCGACA 60.335 52.381 0.00 0.00 0.00 4.35
7200 7350 1.328439 CGTCTGTGTGCTAACTCGAC 58.672 55.000 0.00 0.00 0.00 4.20
7201 7351 0.949397 ACGTCTGTGTGCTAACTCGA 59.051 50.000 0.00 0.00 0.00 4.04
7202 7352 1.328439 GACGTCTGTGTGCTAACTCG 58.672 55.000 8.70 0.00 0.00 4.18
7203 7353 2.417339 TGACGTCTGTGTGCTAACTC 57.583 50.000 17.92 0.00 0.00 3.01
7204 7354 2.668556 CGATGACGTCTGTGTGCTAACT 60.669 50.000 17.92 0.00 34.56 2.24
7205 7355 1.649171 CGATGACGTCTGTGTGCTAAC 59.351 52.381 17.92 0.00 34.56 2.34
7206 7356 1.977188 CGATGACGTCTGTGTGCTAA 58.023 50.000 17.92 0.00 34.56 3.09
7207 7357 3.694889 CGATGACGTCTGTGTGCTA 57.305 52.632 17.92 0.00 34.56 3.49
7208 7358 4.559835 CGATGACGTCTGTGTGCT 57.440 55.556 17.92 0.00 34.56 4.40
7218 7368 1.268794 GGAGAGGTGATGACGATGACG 60.269 57.143 0.00 0.00 45.75 4.35
7219 7369 1.067821 GGGAGAGGTGATGACGATGAC 59.932 57.143 0.00 0.00 0.00 3.06
7220 7370 1.403814 GGGAGAGGTGATGACGATGA 58.596 55.000 0.00 0.00 0.00 2.92
7221 7371 0.390860 GGGGAGAGGTGATGACGATG 59.609 60.000 0.00 0.00 0.00 3.84
7222 7372 0.032117 TGGGGAGAGGTGATGACGAT 60.032 55.000 0.00 0.00 0.00 3.73
7223 7373 0.252057 TTGGGGAGAGGTGATGACGA 60.252 55.000 0.00 0.00 0.00 4.20
7224 7374 0.176680 CTTGGGGAGAGGTGATGACG 59.823 60.000 0.00 0.00 0.00 4.35
7225 7375 0.107459 GCTTGGGGAGAGGTGATGAC 60.107 60.000 0.00 0.00 0.00 3.06
7226 7376 0.547471 TGCTTGGGGAGAGGTGATGA 60.547 55.000 0.00 0.00 0.00 2.92
7227 7377 0.393537 GTGCTTGGGGAGAGGTGATG 60.394 60.000 0.00 0.00 0.00 3.07
7228 7378 1.903877 CGTGCTTGGGGAGAGGTGAT 61.904 60.000 0.00 0.00 0.00 3.06
7229 7379 2.583441 CGTGCTTGGGGAGAGGTGA 61.583 63.158 0.00 0.00 0.00 4.02
7230 7380 2.046892 CGTGCTTGGGGAGAGGTG 60.047 66.667 0.00 0.00 0.00 4.00
7231 7381 4.021925 GCGTGCTTGGGGAGAGGT 62.022 66.667 0.00 0.00 0.00 3.85
7233 7383 4.379243 ACGCGTGCTTGGGGAGAG 62.379 66.667 12.93 0.00 0.00 3.20
7234 7384 4.373116 GACGCGTGCTTGGGGAGA 62.373 66.667 20.70 0.00 0.00 3.71
7235 7385 3.958147 ATGACGCGTGCTTGGGGAG 62.958 63.158 20.70 0.00 0.00 4.30
7236 7386 3.950794 GATGACGCGTGCTTGGGGA 62.951 63.158 20.70 0.00 0.00 4.81
7237 7387 3.499737 GATGACGCGTGCTTGGGG 61.500 66.667 20.70 0.00 0.00 4.96
7238 7388 3.853330 CGATGACGCGTGCTTGGG 61.853 66.667 20.70 0.00 0.00 4.12
7239 7389 2.167219 ATCGATGACGCGTGCTTGG 61.167 57.895 20.70 8.25 39.58 3.61
7240 7390 1.012998 CATCGATGACGCGTGCTTG 60.013 57.895 20.70 7.60 39.58 4.01
7241 7391 2.802667 GCATCGATGACGCGTGCTT 61.803 57.895 29.20 6.64 42.63 3.91
7242 7392 3.257561 GCATCGATGACGCGTGCT 61.258 61.111 29.20 2.18 42.63 4.40
7243 7393 4.285149 GGCATCGATGACGCGTGC 62.285 66.667 29.20 12.44 43.95 5.34
7244 7394 3.630148 GGGCATCGATGACGCGTG 61.630 66.667 29.20 0.93 36.40 5.34
7245 7395 4.891727 GGGGCATCGATGACGCGT 62.892 66.667 29.74 13.85 39.04 6.01
7248 7398 1.673033 GGATTAGGGGCATCGATGACG 60.673 57.143 29.20 2.92 36.40 4.35
7249 7399 1.339151 GGGATTAGGGGCATCGATGAC 60.339 57.143 29.20 26.52 34.16 3.06
7250 7400 0.984230 GGGATTAGGGGCATCGATGA 59.016 55.000 29.20 7.15 0.00 2.92
7251 7401 0.987294 AGGGATTAGGGGCATCGATG 59.013 55.000 21.27 21.27 0.00 3.84
7252 7402 0.987294 CAGGGATTAGGGGCATCGAT 59.013 55.000 0.00 0.00 0.00 3.59
7253 7403 0.105194 TCAGGGATTAGGGGCATCGA 60.105 55.000 0.00 0.00 0.00 3.59
7254 7404 0.322975 CTCAGGGATTAGGGGCATCG 59.677 60.000 0.00 0.00 0.00 3.84
7255 7405 0.037447 GCTCAGGGATTAGGGGCATC 59.963 60.000 0.00 0.00 0.00 3.91
7256 7406 0.698886 TGCTCAGGGATTAGGGGCAT 60.699 55.000 0.00 0.00 0.00 4.40
7257 7407 0.918799 TTGCTCAGGGATTAGGGGCA 60.919 55.000 0.00 0.00 0.00 5.36
7258 7408 0.179006 CTTGCTCAGGGATTAGGGGC 60.179 60.000 0.00 0.00 0.00 5.80
7259 7409 0.179006 GCTTGCTCAGGGATTAGGGG 60.179 60.000 0.00 0.00 0.00 4.79
7260 7410 0.533755 CGCTTGCTCAGGGATTAGGG 60.534 60.000 0.00 0.00 37.67 3.53
7261 7411 0.465705 TCGCTTGCTCAGGGATTAGG 59.534 55.000 0.00 0.00 39.52 2.69
7262 7412 1.137872 AGTCGCTTGCTCAGGGATTAG 59.862 52.381 6.53 0.00 45.70 1.73
7263 7413 1.137086 GAGTCGCTTGCTCAGGGATTA 59.863 52.381 6.53 0.00 45.70 1.75
7264 7414 0.107945 GAGTCGCTTGCTCAGGGATT 60.108 55.000 6.53 3.11 45.70 3.01
7265 7415 1.519719 GAGTCGCTTGCTCAGGGAT 59.480 57.895 6.53 0.00 45.70 3.85
7266 7416 2.650116 GGAGTCGCTTGCTCAGGGA 61.650 63.158 0.00 0.00 42.10 4.20
7267 7417 2.125350 GGAGTCGCTTGCTCAGGG 60.125 66.667 0.00 0.00 34.83 4.45
7268 7418 2.507992 CGGAGTCGCTTGCTCAGG 60.508 66.667 0.00 0.00 34.83 3.86
7269 7419 1.803519 GTCGGAGTCGCTTGCTCAG 60.804 63.158 0.00 0.00 34.83 3.35
7270 7420 1.806461 AAGTCGGAGTCGCTTGCTCA 61.806 55.000 0.00 0.00 33.78 4.26
7271 7421 1.073768 GAAGTCGGAGTCGCTTGCTC 61.074 60.000 0.00 0.00 34.64 4.26
7272 7422 1.080434 GAAGTCGGAGTCGCTTGCT 60.080 57.895 0.00 0.00 34.64 3.91
7273 7423 2.437343 CGAAGTCGGAGTCGCTTGC 61.437 63.158 0.00 0.00 34.64 4.01
7274 7424 3.755404 CGAAGTCGGAGTCGCTTG 58.245 61.111 0.00 0.00 34.64 4.01
7278 7428 2.876645 GCAGCGAAGTCGGAGTCG 60.877 66.667 2.47 6.65 40.23 4.18
7279 7429 0.944311 TTTGCAGCGAAGTCGGAGTC 60.944 55.000 2.47 0.00 40.23 3.36
7280 7430 1.069090 TTTGCAGCGAAGTCGGAGT 59.931 52.632 2.47 0.00 40.23 3.85
7281 7431 1.221466 TGTTTGCAGCGAAGTCGGAG 61.221 55.000 2.47 0.00 40.23 4.63
7282 7432 0.812014 TTGTTTGCAGCGAAGTCGGA 60.812 50.000 2.47 0.00 40.23 4.55
7283 7433 0.028770 TTTGTTTGCAGCGAAGTCGG 59.971 50.000 2.47 0.00 40.23 4.79
7284 7434 1.112459 GTTTGTTTGCAGCGAAGTCG 58.888 50.000 0.00 0.00 43.27 4.18
7285 7435 1.112459 CGTTTGTTTGCAGCGAAGTC 58.888 50.000 0.00 0.00 0.00 3.01
7286 7436 0.450184 ACGTTTGTTTGCAGCGAAGT 59.550 45.000 0.00 0.00 0.00 3.01
7287 7437 1.112459 GACGTTTGTTTGCAGCGAAG 58.888 50.000 0.00 0.00 0.00 3.79
7288 7438 0.587737 CGACGTTTGTTTGCAGCGAA 60.588 50.000 0.00 0.00 0.00 4.70
7289 7439 1.011684 CGACGTTTGTTTGCAGCGA 60.012 52.632 0.00 0.00 0.00 4.93
7290 7440 1.011684 TCGACGTTTGTTTGCAGCG 60.012 52.632 0.00 0.00 0.00 5.18
7291 7441 0.027586 AGTCGACGTTTGTTTGCAGC 59.972 50.000 10.46 0.00 0.00 5.25
7292 7442 1.326245 TGAGTCGACGTTTGTTTGCAG 59.674 47.619 10.46 0.00 0.00 4.41
7293 7443 1.360820 TGAGTCGACGTTTGTTTGCA 58.639 45.000 10.46 0.00 0.00 4.08
7294 7444 2.098870 GTTGAGTCGACGTTTGTTTGC 58.901 47.619 10.46 0.00 0.00 3.68
7295 7445 2.538132 GGGTTGAGTCGACGTTTGTTTG 60.538 50.000 10.46 0.00 0.00 2.93
7296 7446 1.667212 GGGTTGAGTCGACGTTTGTTT 59.333 47.619 10.46 0.00 0.00 2.83
7297 7447 1.134610 AGGGTTGAGTCGACGTTTGTT 60.135 47.619 10.46 0.00 0.00 2.83
7298 7448 0.462789 AGGGTTGAGTCGACGTTTGT 59.537 50.000 10.46 0.00 0.00 2.83
7299 7449 1.137513 GAGGGTTGAGTCGACGTTTG 58.862 55.000 10.46 0.00 0.00 2.93
7300 7450 0.748450 TGAGGGTTGAGTCGACGTTT 59.252 50.000 10.46 0.00 0.00 3.60
7301 7451 0.031721 GTGAGGGTTGAGTCGACGTT 59.968 55.000 10.46 0.00 0.00 3.99
7302 7452 1.658673 GTGAGGGTTGAGTCGACGT 59.341 57.895 10.46 0.00 0.00 4.34
7303 7453 1.080705 GGTGAGGGTTGAGTCGACG 60.081 63.158 10.46 0.00 0.00 5.12
7304 7454 1.080705 CGGTGAGGGTTGAGTCGAC 60.081 63.158 7.70 7.70 0.00 4.20
7305 7455 2.927580 GCGGTGAGGGTTGAGTCGA 61.928 63.158 0.00 0.00 0.00 4.20
7306 7456 2.432628 GCGGTGAGGGTTGAGTCG 60.433 66.667 0.00 0.00 0.00 4.18
7307 7457 1.374758 CTGCGGTGAGGGTTGAGTC 60.375 63.158 0.00 0.00 0.00 3.36
7308 7458 1.407656 TTCTGCGGTGAGGGTTGAGT 61.408 55.000 0.00 0.00 0.00 3.41
7309 7459 0.671781 CTTCTGCGGTGAGGGTTGAG 60.672 60.000 0.00 0.00 0.00 3.02
7310 7460 1.371183 CTTCTGCGGTGAGGGTTGA 59.629 57.895 0.00 0.00 0.00 3.18
7311 7461 2.328099 GCTTCTGCGGTGAGGGTTG 61.328 63.158 0.00 0.00 0.00 3.77
7312 7462 2.032681 GCTTCTGCGGTGAGGGTT 59.967 61.111 0.00 0.00 0.00 4.11
7313 7463 4.021925 GGCTTCTGCGGTGAGGGT 62.022 66.667 0.00 0.00 40.82 4.34
7321 7471 2.606961 TTTCTGCACGGCTTCTGCG 61.607 57.895 0.00 0.00 40.82 5.18
7322 7472 1.081840 GTTTCTGCACGGCTTCTGC 60.082 57.895 0.00 0.00 38.76 4.26
7323 7473 0.040958 GTGTTTCTGCACGGCTTCTG 60.041 55.000 0.00 0.00 0.00 3.02
7324 7474 0.463654 TGTGTTTCTGCACGGCTTCT 60.464 50.000 0.00 0.00 41.94 2.85
7325 7475 0.593128 ATGTGTTTCTGCACGGCTTC 59.407 50.000 0.00 0.00 41.94 3.86
7326 7476 0.311790 CATGTGTTTCTGCACGGCTT 59.688 50.000 0.00 0.00 41.94 4.35
7327 7477 0.534877 TCATGTGTTTCTGCACGGCT 60.535 50.000 0.00 0.00 41.94 5.52
7328 7478 0.310543 TTCATGTGTTTCTGCACGGC 59.689 50.000 0.00 0.00 41.94 5.68
7329 7479 1.872952 TCTTCATGTGTTTCTGCACGG 59.127 47.619 0.00 0.00 41.94 4.94
7330 7480 3.425359 GGATCTTCATGTGTTTCTGCACG 60.425 47.826 0.00 0.00 41.94 5.34
7331 7481 3.755378 AGGATCTTCATGTGTTTCTGCAC 59.245 43.478 0.00 0.00 39.65 4.57
7332 7482 3.754850 CAGGATCTTCATGTGTTTCTGCA 59.245 43.478 0.00 0.00 0.00 4.41
7333 7483 3.427233 GCAGGATCTTCATGTGTTTCTGC 60.427 47.826 13.09 13.09 38.31 4.26
7334 7484 3.128242 GGCAGGATCTTCATGTGTTTCTG 59.872 47.826 0.00 0.00 29.72 3.02
7335 7485 3.245016 TGGCAGGATCTTCATGTGTTTCT 60.245 43.478 0.00 0.00 29.72 2.52
7336 7486 3.084039 TGGCAGGATCTTCATGTGTTTC 58.916 45.455 0.00 0.00 29.72 2.78
7337 7487 3.087031 CTGGCAGGATCTTCATGTGTTT 58.913 45.455 6.61 0.00 29.72 2.83
7338 7488 2.306805 TCTGGCAGGATCTTCATGTGTT 59.693 45.455 15.73 0.00 29.72 3.32
7339 7489 1.911357 TCTGGCAGGATCTTCATGTGT 59.089 47.619 15.73 0.00 29.72 3.72
7340 7490 2.681848 GTTCTGGCAGGATCTTCATGTG 59.318 50.000 15.73 0.00 29.72 3.21
7341 7491 2.575279 AGTTCTGGCAGGATCTTCATGT 59.425 45.455 15.73 0.00 29.72 3.21
7342 7492 3.278668 AGTTCTGGCAGGATCTTCATG 57.721 47.619 15.73 0.00 0.00 3.07
7343 7493 4.685575 GCTAAGTTCTGGCAGGATCTTCAT 60.686 45.833 15.73 0.00 30.75 2.57
7344 7494 3.369892 GCTAAGTTCTGGCAGGATCTTCA 60.370 47.826 15.73 5.76 30.75 3.02
7345 7495 3.202097 GCTAAGTTCTGGCAGGATCTTC 58.798 50.000 15.73 0.00 30.75 2.87
7346 7496 2.092699 GGCTAAGTTCTGGCAGGATCTT 60.093 50.000 15.73 17.16 31.85 2.40
7347 7497 1.488393 GGCTAAGTTCTGGCAGGATCT 59.512 52.381 15.73 7.84 31.85 2.75
7348 7498 1.210478 TGGCTAAGTTCTGGCAGGATC 59.790 52.381 15.73 5.58 34.65 3.36
7349 7499 1.065126 GTGGCTAAGTTCTGGCAGGAT 60.065 52.381 15.73 0.00 39.38 3.24
7350 7500 0.324943 GTGGCTAAGTTCTGGCAGGA 59.675 55.000 15.73 1.78 39.38 3.86
7351 7501 0.678048 GGTGGCTAAGTTCTGGCAGG 60.678 60.000 15.73 0.00 39.38 4.85
7352 7502 0.326264 AGGTGGCTAAGTTCTGGCAG 59.674 55.000 8.58 8.58 39.38 4.85
7353 7503 2.463441 AGGTGGCTAAGTTCTGGCA 58.537 52.632 1.75 1.75 36.39 4.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.