Multiple sequence alignment - TraesCS3B01G163900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G163900 chr3B 100.000 2348 0 0 1 2348 161633699 161631352 0.000000e+00 4337
1 TraesCS3B01G163900 chr3D 92.405 1501 67 20 231 1710 110393656 110392182 0.000000e+00 2097
2 TraesCS3B01G163900 chr3D 92.896 183 10 3 1 180 110393837 110393655 1.790000e-66 263
3 TraesCS3B01G163900 chr3A 87.925 1706 136 39 1 1677 119697111 119698775 0.000000e+00 1945
4 TraesCS3B01G163900 chr2D 94.034 352 20 1 1708 2058 40146031 40146382 1.240000e-147 532
5 TraesCS3B01G163900 chr2D 94.034 352 20 1 1707 2057 534851798 534852149 1.240000e-147 532
6 TraesCS3B01G163900 chr1D 94.017 351 20 1 1708 2057 359693183 359693533 4.440000e-147 531
7 TraesCS3B01G163900 chr1D 93.503 354 22 1 1705 2057 218258705 218259058 2.070000e-145 525
8 TraesCS3B01G163900 chr1D 93.484 353 22 1 1708 2059 7423825 7424177 7.430000e-145 523
9 TraesCS3B01G163900 chr7D 93.750 352 21 1 1708 2058 99961409 99961760 5.750000e-146 527
10 TraesCS3B01G163900 chr7D 93.732 351 21 1 1708 2057 156079502 156079852 2.070000e-145 525
11 TraesCS3B01G163900 chr4D 93.277 357 23 1 1705 2060 24774476 24774832 2.070000e-145 525
12 TraesCS3B01G163900 chr6B 91.421 373 30 2 1704 2074 17495973 17496345 5.790000e-141 510
13 TraesCS3B01G163900 chr5B 87.892 446 27 13 1112 1543 137282869 137283301 1.250000e-137 499


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G163900 chr3B 161631352 161633699 2347 True 4337 4337 100.0000 1 2348 1 chr3B.!!$R1 2347
1 TraesCS3B01G163900 chr3D 110392182 110393837 1655 True 1180 2097 92.6505 1 1710 2 chr3D.!!$R1 1709
2 TraesCS3B01G163900 chr3A 119697111 119698775 1664 False 1945 1945 87.9250 1 1677 1 chr3A.!!$F1 1676

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
595 608 1.407437 CCAAAATAGAGCCGCCTCAGT 60.407 52.381 0.0 0.0 40.68 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2071 2117 0.098728 GGATTTGCGATGTCCGGTTG 59.901 55.0 0.0 0.0 39.04 3.77 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
65 66 2.552315 GAGCCGAAGAACAATGGACAAA 59.448 45.455 0.00 0.00 0.00 2.83
66 67 2.554032 AGCCGAAGAACAATGGACAAAG 59.446 45.455 0.00 0.00 0.00 2.77
86 90 3.403038 AGTGTAACCAGTTCATGTCAGC 58.597 45.455 0.00 0.00 37.80 4.26
102 107 3.243873 TGTCAGCTACAGTTCAGTGGAAG 60.244 47.826 0.00 0.00 30.34 3.46
199 208 9.967451 ATATATAGGATATTGTCGATCCGATCT 57.033 33.333 6.81 0.00 46.49 2.75
204 216 3.584406 ATTGTCGATCCGATCTGATCC 57.416 47.619 18.23 8.43 38.32 3.36
212 224 1.757118 TCCGATCTGATCCCTTGTCAC 59.243 52.381 11.84 0.00 0.00 3.67
223 235 2.158667 TCCCTTGTCACCCTGAAAGTTC 60.159 50.000 0.00 0.00 0.00 3.01
230 242 3.381590 GTCACCCTGAAAGTTCAAGCTTT 59.618 43.478 0.00 0.00 40.94 3.51
236 248 5.278022 CCCTGAAAGTTCAAGCTTTACAGTC 60.278 44.000 0.00 0.91 38.64 3.51
244 256 6.205658 AGTTCAAGCTTTACAGTCCTGAAATC 59.794 38.462 0.00 0.00 0.00 2.17
246 258 3.956744 AGCTTTACAGTCCTGAAATCCC 58.043 45.455 0.40 0.00 0.00 3.85
316 329 3.571401 AGGGAGCATTTGAGTTTGTTGAG 59.429 43.478 0.00 0.00 0.00 3.02
317 330 3.319122 GGGAGCATTTGAGTTTGTTGAGT 59.681 43.478 0.00 0.00 0.00 3.41
318 331 4.518970 GGGAGCATTTGAGTTTGTTGAGTA 59.481 41.667 0.00 0.00 0.00 2.59
339 352 4.479786 AGTATCTGTCTGGAAAGGAAGC 57.520 45.455 0.00 0.00 0.00 3.86
348 361 4.640647 GTCTGGAAAGGAAGCGGAATTATT 59.359 41.667 0.00 0.00 0.00 1.40
361 374 4.338118 GCGGAATTATTGAGTTGGGATGAA 59.662 41.667 0.00 0.00 0.00 2.57
490 503 2.890474 GCCCGCCGTGTCATACTG 60.890 66.667 0.00 0.00 0.00 2.74
505 518 5.817296 TGTCATACTGTGATTAGTCCAATGC 59.183 40.000 0.00 0.00 39.48 3.56
595 608 1.407437 CCAAAATAGAGCCGCCTCAGT 60.407 52.381 0.00 0.00 40.68 3.41
621 634 2.657296 ACTGACGTCGCACCAACG 60.657 61.111 11.62 0.00 45.37 4.10
626 639 4.483683 CGTCGCACCAACGCATCG 62.484 66.667 0.00 0.00 32.84 3.84
894 913 2.897762 TTCCCCACGCCTAACCACC 61.898 63.158 0.00 0.00 0.00 4.61
1162 1182 0.753848 CTCCTCCTCCTCCTCGTTCC 60.754 65.000 0.00 0.00 0.00 3.62
1166 1186 4.856607 CTCCTCCTCGTTCCGCGC 62.857 72.222 0.00 0.00 41.07 6.86
1203 1223 1.546323 CCTGGCTGTTGGTCTGATGTT 60.546 52.381 0.00 0.00 0.00 2.71
1217 1247 0.871722 GATGTTTGGTGCGTGCTGTA 59.128 50.000 0.00 0.00 0.00 2.74
1218 1248 1.265635 GATGTTTGGTGCGTGCTGTAA 59.734 47.619 0.00 0.00 0.00 2.41
1219 1249 0.378962 TGTTTGGTGCGTGCTGTAAC 59.621 50.000 0.00 0.00 0.00 2.50
1355 1385 0.394565 ATACCCTGCTGATTCCTCGC 59.605 55.000 0.00 0.00 0.00 5.03
1359 1389 0.106335 CCTGCTGATTCCTCGCTGAT 59.894 55.000 0.00 0.00 0.00 2.90
1503 1536 2.224695 CCATGGCTGATGATTCCTGCTA 60.225 50.000 0.00 0.00 33.31 3.49
1505 1538 1.202734 TGGCTGATGATTCCTGCTAGC 60.203 52.381 8.10 8.10 0.00 3.42
1544 1577 0.744771 GTTCCTGTGATCCCTTCCGC 60.745 60.000 0.00 0.00 0.00 5.54
1571 1604 9.334693 GATGTTTGATGATTGTGACTTTACTTC 57.665 33.333 0.00 0.00 0.00 3.01
1609 1642 0.796927 GCCTGTAGTTCTGTTTCCGC 59.203 55.000 0.00 0.00 0.00 5.54
1671 1716 1.532090 CGATGTCTACCGTGTGCTCTC 60.532 57.143 0.00 0.00 0.00 3.20
1693 1739 3.159213 TGATGTTGATCACTGGGCTTT 57.841 42.857 0.00 0.00 33.40 3.51
1694 1740 3.499338 TGATGTTGATCACTGGGCTTTT 58.501 40.909 0.00 0.00 33.40 2.27
1714 1760 8.082334 GCTTTTCTGCCTTAAGAGTATATCTG 57.918 38.462 3.36 0.00 38.67 2.90
1715 1761 7.172361 GCTTTTCTGCCTTAAGAGTATATCTGG 59.828 40.741 3.36 0.00 38.67 3.86
1716 1762 5.730296 TCTGCCTTAAGAGTATATCTGGC 57.270 43.478 3.36 0.00 42.40 4.85
1717 1763 4.528596 TCTGCCTTAAGAGTATATCTGGCC 59.471 45.833 3.36 0.00 41.73 5.36
1718 1764 4.231273 TGCCTTAAGAGTATATCTGGCCA 58.769 43.478 4.71 4.71 41.73 5.36
1719 1765 4.846367 TGCCTTAAGAGTATATCTGGCCAT 59.154 41.667 5.51 0.00 41.73 4.40
1720 1766 5.181748 GCCTTAAGAGTATATCTGGCCATG 58.818 45.833 5.51 0.00 38.24 3.66
1721 1767 5.738909 CCTTAAGAGTATATCTGGCCATGG 58.261 45.833 5.51 7.63 38.67 3.66
1722 1768 5.338708 CCTTAAGAGTATATCTGGCCATGGG 60.339 48.000 15.13 0.00 38.67 4.00
1723 1769 2.307098 AAGAGTATATCTGGCCATGGGC 59.693 50.000 30.65 30.65 42.69 5.36
1802 1848 4.431524 CCCTCCCAGGCCCTACCA 62.432 72.222 0.00 0.00 43.14 3.25
1803 1849 2.039405 CCTCCCAGGCCCTACCAT 60.039 66.667 0.00 0.00 43.14 3.55
1804 1850 2.150051 CCTCCCAGGCCCTACCATC 61.150 68.421 0.00 0.00 43.14 3.51
1805 1851 2.445845 TCCCAGGCCCTACCATCG 60.446 66.667 0.00 0.00 43.14 3.84
1806 1852 3.560251 CCCAGGCCCTACCATCGG 61.560 72.222 0.00 0.00 43.14 4.18
1807 1853 3.560251 CCAGGCCCTACCATCGGG 61.560 72.222 0.00 0.00 44.89 5.14
1812 1858 3.468063 CCCTACCATCGGGCCTAC 58.532 66.667 0.84 0.00 37.90 3.18
1813 1859 1.152312 CCCTACCATCGGGCCTACT 60.152 63.158 0.84 0.00 37.90 2.57
1814 1860 0.763223 CCCTACCATCGGGCCTACTT 60.763 60.000 0.84 0.00 37.90 2.24
1815 1861 1.129058 CCTACCATCGGGCCTACTTT 58.871 55.000 0.84 0.00 37.90 2.66
1816 1862 1.489230 CCTACCATCGGGCCTACTTTT 59.511 52.381 0.84 0.00 37.90 2.27
1817 1863 2.484947 CCTACCATCGGGCCTACTTTTC 60.485 54.545 0.84 0.00 37.90 2.29
1818 1864 0.988832 ACCATCGGGCCTACTTTTCA 59.011 50.000 0.84 0.00 37.90 2.69
1819 1865 1.353022 ACCATCGGGCCTACTTTTCAA 59.647 47.619 0.84 0.00 37.90 2.69
1820 1866 2.017049 CCATCGGGCCTACTTTTCAAG 58.983 52.381 0.84 0.00 0.00 3.02
1821 1867 1.401905 CATCGGGCCTACTTTTCAAGC 59.598 52.381 0.84 0.00 0.00 4.01
1822 1868 0.322187 TCGGGCCTACTTTTCAAGCC 60.322 55.000 0.84 0.00 43.09 4.35
1824 1870 3.356814 GGCCTACTTTTCAAGCCCA 57.643 52.632 0.00 0.00 37.66 5.36
1825 1871 1.627864 GGCCTACTTTTCAAGCCCAA 58.372 50.000 0.00 0.00 37.66 4.12
1826 1872 1.546029 GGCCTACTTTTCAAGCCCAAG 59.454 52.381 0.00 0.00 37.66 3.61
1827 1873 1.067565 GCCTACTTTTCAAGCCCAAGC 60.068 52.381 0.00 0.00 40.32 4.01
1828 1874 1.546029 CCTACTTTTCAAGCCCAAGCC 59.454 52.381 0.00 0.00 41.25 4.35
1829 1875 2.519013 CTACTTTTCAAGCCCAAGCCT 58.481 47.619 0.00 0.00 41.25 4.58
1830 1876 1.043022 ACTTTTCAAGCCCAAGCCTG 58.957 50.000 0.00 0.00 41.25 4.85
1831 1877 0.319405 CTTTTCAAGCCCAAGCCTGG 59.681 55.000 0.00 0.00 43.10 4.45
1838 1884 3.747579 CCCAAGCCTGGCCCATCT 61.748 66.667 16.57 0.00 41.99 2.90
1839 1885 2.441532 CCAAGCCTGGCCCATCTG 60.442 66.667 16.57 5.27 35.39 2.90
1840 1886 2.441532 CAAGCCTGGCCCATCTGG 60.442 66.667 16.57 0.00 37.09 3.86
1841 1887 2.943265 AAGCCTGGCCCATCTGGT 60.943 61.111 16.57 0.00 36.04 4.00
1842 1888 1.619363 AAGCCTGGCCCATCTGGTA 60.619 57.895 16.57 0.00 36.04 3.25
1843 1889 1.214305 AAGCCTGGCCCATCTGGTAA 61.214 55.000 16.57 0.00 36.04 2.85
1844 1890 0.995675 AGCCTGGCCCATCTGGTAAT 60.996 55.000 16.57 0.00 36.04 1.89
1845 1891 0.771127 GCCTGGCCCATCTGGTAATA 59.229 55.000 7.66 0.00 36.04 0.98
1846 1892 1.144913 GCCTGGCCCATCTGGTAATAA 59.855 52.381 7.66 0.00 36.04 1.40
1847 1893 2.815589 GCCTGGCCCATCTGGTAATAAG 60.816 54.545 7.66 0.00 36.04 1.73
1848 1894 2.508526 CTGGCCCATCTGGTAATAAGC 58.491 52.381 0.00 0.00 36.04 3.09
1849 1895 1.144913 TGGCCCATCTGGTAATAAGCC 59.855 52.381 0.00 5.31 36.14 4.35
1850 1896 1.547901 GGCCCATCTGGTAATAAGCCC 60.548 57.143 0.00 0.00 36.04 5.19
1851 1897 1.425448 GCCCATCTGGTAATAAGCCCT 59.575 52.381 0.00 0.00 36.04 5.19
1852 1898 2.642807 GCCCATCTGGTAATAAGCCCTA 59.357 50.000 0.00 0.00 36.04 3.53
1853 1899 3.073946 GCCCATCTGGTAATAAGCCCTAA 59.926 47.826 0.00 0.00 36.04 2.69
1854 1900 4.447180 GCCCATCTGGTAATAAGCCCTAAA 60.447 45.833 0.00 0.00 36.04 1.85
1855 1901 5.701224 CCCATCTGGTAATAAGCCCTAAAA 58.299 41.667 0.00 0.00 0.00 1.52
1856 1902 6.133356 CCCATCTGGTAATAAGCCCTAAAAA 58.867 40.000 0.00 0.00 0.00 1.94
1857 1903 6.265422 CCCATCTGGTAATAAGCCCTAAAAAG 59.735 42.308 0.00 0.00 0.00 2.27
1858 1904 6.239036 CCATCTGGTAATAAGCCCTAAAAAGC 60.239 42.308 0.00 0.00 0.00 3.51
1859 1905 5.198207 TCTGGTAATAAGCCCTAAAAAGCC 58.802 41.667 0.00 0.00 0.00 4.35
1860 1906 4.936802 TGGTAATAAGCCCTAAAAAGCCA 58.063 39.130 0.00 0.00 0.00 4.75
1861 1907 5.524535 TGGTAATAAGCCCTAAAAAGCCAT 58.475 37.500 0.00 0.00 0.00 4.40
1862 1908 5.961421 TGGTAATAAGCCCTAAAAAGCCATT 59.039 36.000 0.00 0.00 0.00 3.16
1863 1909 7.126733 TGGTAATAAGCCCTAAAAAGCCATTA 58.873 34.615 0.00 0.00 0.00 1.90
1864 1910 7.286775 TGGTAATAAGCCCTAAAAAGCCATTAG 59.713 37.037 0.00 0.00 0.00 1.73
1865 1911 6.731292 AATAAGCCCTAAAAAGCCATTAGG 57.269 37.500 11.15 11.15 45.95 2.69
1878 1924 3.771577 CCATTAGGGCTTAGGGTAGTG 57.228 52.381 0.00 0.00 0.00 2.74
1879 1925 2.372172 CCATTAGGGCTTAGGGTAGTGG 59.628 54.545 0.00 0.00 0.00 4.00
1880 1926 1.503800 TTAGGGCTTAGGGTAGTGGC 58.496 55.000 0.00 0.00 0.00 5.01
1881 1927 0.399519 TAGGGCTTAGGGTAGTGGCC 60.400 60.000 0.00 0.00 44.22 5.36
1896 1942 3.087906 GCCCGGGCCTCTTCCTTA 61.088 66.667 36.64 0.00 34.56 2.69
1897 1943 2.676265 GCCCGGGCCTCTTCCTTAA 61.676 63.158 36.64 0.00 34.56 1.85
1898 1944 1.996086 CCCGGGCCTCTTCCTTAAA 59.004 57.895 8.08 0.00 0.00 1.52
1899 1945 0.330267 CCCGGGCCTCTTCCTTAAAA 59.670 55.000 8.08 0.00 0.00 1.52
1900 1946 1.063942 CCCGGGCCTCTTCCTTAAAAT 60.064 52.381 8.08 0.00 0.00 1.82
1901 1947 2.024414 CCGGGCCTCTTCCTTAAAATG 58.976 52.381 0.84 0.00 0.00 2.32
1902 1948 1.405463 CGGGCCTCTTCCTTAAAATGC 59.595 52.381 0.84 0.00 0.00 3.56
1903 1949 2.739943 GGGCCTCTTCCTTAAAATGCT 58.260 47.619 0.84 0.00 0.00 3.79
1904 1950 3.684413 CGGGCCTCTTCCTTAAAATGCTA 60.684 47.826 0.84 0.00 0.00 3.49
1905 1951 4.278310 GGGCCTCTTCCTTAAAATGCTAA 58.722 43.478 0.84 0.00 0.00 3.09
1906 1952 4.895889 GGGCCTCTTCCTTAAAATGCTAAT 59.104 41.667 0.84 0.00 0.00 1.73
1907 1953 6.068670 GGGCCTCTTCCTTAAAATGCTAATA 58.931 40.000 0.84 0.00 0.00 0.98
1908 1954 6.721668 GGGCCTCTTCCTTAAAATGCTAATAT 59.278 38.462 0.84 0.00 0.00 1.28
1909 1955 7.309438 GGGCCTCTTCCTTAAAATGCTAATATG 60.309 40.741 0.84 0.00 0.00 1.78
1910 1956 7.087007 GCCTCTTCCTTAAAATGCTAATATGC 58.913 38.462 0.00 0.00 0.00 3.14
1911 1957 7.597386 CCTCTTCCTTAAAATGCTAATATGCC 58.403 38.462 0.00 0.00 0.00 4.40
1912 1958 7.231317 CCTCTTCCTTAAAATGCTAATATGCCA 59.769 37.037 0.00 0.00 0.00 4.92
1913 1959 8.532186 TCTTCCTTAAAATGCTAATATGCCAA 57.468 30.769 0.00 0.00 0.00 4.52
1914 1960 8.632679 TCTTCCTTAAAATGCTAATATGCCAAG 58.367 33.333 0.00 0.00 0.00 3.61
1915 1961 6.748132 TCCTTAAAATGCTAATATGCCAAGC 58.252 36.000 0.00 0.00 36.77 4.01
1916 1962 5.928264 CCTTAAAATGCTAATATGCCAAGCC 59.072 40.000 0.00 0.00 35.33 4.35
1917 1963 4.341366 AAAATGCTAATATGCCAAGCCC 57.659 40.909 0.00 0.00 35.33 5.19
1918 1964 2.681319 ATGCTAATATGCCAAGCCCA 57.319 45.000 0.00 0.00 35.33 5.36
1919 1965 2.450867 TGCTAATATGCCAAGCCCAA 57.549 45.000 0.00 0.00 35.33 4.12
1920 1966 2.309613 TGCTAATATGCCAAGCCCAAG 58.690 47.619 0.00 0.00 35.33 3.61
1921 1967 1.000171 GCTAATATGCCAAGCCCAAGC 60.000 52.381 0.00 0.00 40.32 4.01
1922 1968 1.615392 CTAATATGCCAAGCCCAAGCC 59.385 52.381 0.00 0.00 41.25 4.35
1923 1969 1.050421 AATATGCCAAGCCCAAGCCC 61.050 55.000 0.00 0.00 41.25 5.19
1928 1974 4.659172 CAAGCCCAAGCCCGTCCA 62.659 66.667 0.00 0.00 41.25 4.02
1929 1975 4.351054 AAGCCCAAGCCCGTCCAG 62.351 66.667 0.00 0.00 41.25 3.86
1940 1986 4.335647 CGTCCAGGCCCTGCTTGT 62.336 66.667 4.81 0.00 33.72 3.16
1941 1987 2.674380 GTCCAGGCCCTGCTTGTG 60.674 66.667 4.81 0.00 33.72 3.33
1942 1988 3.970410 TCCAGGCCCTGCTTGTGG 61.970 66.667 4.81 0.00 33.72 4.17
1947 1993 2.598394 GCCCTGCTTGTGGCTCAA 60.598 61.111 1.66 1.66 44.46 3.02
1948 1994 2.202395 GCCCTGCTTGTGGCTCAAA 61.202 57.895 3.37 0.00 44.46 2.69
1949 1995 1.747325 GCCCTGCTTGTGGCTCAAAA 61.747 55.000 3.37 0.00 44.46 2.44
1950 1996 0.032540 CCCTGCTTGTGGCTCAAAAC 59.967 55.000 3.37 0.00 42.39 2.43
1951 1997 1.035139 CCTGCTTGTGGCTCAAAACT 58.965 50.000 3.37 0.00 42.39 2.66
1952 1998 1.000938 CCTGCTTGTGGCTCAAAACTC 60.001 52.381 3.37 0.00 42.39 3.01
1953 1999 1.677576 CTGCTTGTGGCTCAAAACTCA 59.322 47.619 3.37 0.00 42.39 3.41
1954 2000 1.677576 TGCTTGTGGCTCAAAACTCAG 59.322 47.619 3.37 0.00 42.39 3.35
1955 2001 1.949525 GCTTGTGGCTCAAAACTCAGA 59.050 47.619 3.37 0.00 38.06 3.27
1956 2002 2.287248 GCTTGTGGCTCAAAACTCAGAC 60.287 50.000 3.37 0.00 38.06 3.51
1957 2003 1.967319 TGTGGCTCAAAACTCAGACC 58.033 50.000 0.00 0.00 0.00 3.85
1958 2004 1.239347 GTGGCTCAAAACTCAGACCC 58.761 55.000 0.00 0.00 0.00 4.46
1959 2005 0.843309 TGGCTCAAAACTCAGACCCA 59.157 50.000 0.00 0.00 0.00 4.51
1960 2006 1.214175 TGGCTCAAAACTCAGACCCAA 59.786 47.619 0.00 0.00 0.00 4.12
1961 2007 1.882623 GGCTCAAAACTCAGACCCAAG 59.117 52.381 0.00 0.00 0.00 3.61
1962 2008 1.268079 GCTCAAAACTCAGACCCAAGC 59.732 52.381 0.00 0.00 0.00 4.01
1963 2009 1.882623 CTCAAAACTCAGACCCAAGCC 59.117 52.381 0.00 0.00 0.00 4.35
1964 2010 0.961753 CAAAACTCAGACCCAAGCCC 59.038 55.000 0.00 0.00 0.00 5.19
1965 2011 0.537371 AAAACTCAGACCCAAGCCCG 60.537 55.000 0.00 0.00 0.00 6.13
1966 2012 2.411765 AAACTCAGACCCAAGCCCGG 62.412 60.000 0.00 0.00 0.00 5.73
1967 2013 4.785453 CTCAGACCCAAGCCCGGC 62.785 72.222 0.00 0.00 0.00 6.13
2006 2052 2.278332 GCCTAGGCCCTGGATTTTAG 57.722 55.000 24.19 0.33 34.56 1.85
2007 2053 1.202940 GCCTAGGCCCTGGATTTTAGG 60.203 57.143 24.19 10.45 34.56 2.69
2013 2059 3.520623 CCTGGATTTTAGGGCAGGG 57.479 57.895 0.00 0.00 0.00 4.45
2014 2060 0.756815 CCTGGATTTTAGGGCAGGGC 60.757 60.000 0.00 0.00 0.00 5.19
2054 2100 2.191641 GCCTCAGATGGCCAGGAC 59.808 66.667 13.05 5.34 46.82 3.85
2055 2101 2.373707 GCCTCAGATGGCCAGGACT 61.374 63.158 13.05 7.88 46.82 3.85
2056 2102 1.050988 GCCTCAGATGGCCAGGACTA 61.051 60.000 13.05 0.00 46.82 2.59
2057 2103 0.755686 CCTCAGATGGCCAGGACTAC 59.244 60.000 13.05 0.00 0.00 2.73
2058 2104 1.690845 CCTCAGATGGCCAGGACTACT 60.691 57.143 13.05 0.45 0.00 2.57
2059 2105 2.114616 CTCAGATGGCCAGGACTACTT 58.885 52.381 13.05 0.00 0.00 2.24
2060 2106 3.300388 CTCAGATGGCCAGGACTACTTA 58.700 50.000 13.05 0.00 0.00 2.24
2061 2107 3.706594 CTCAGATGGCCAGGACTACTTAA 59.293 47.826 13.05 0.00 0.00 1.85
2062 2108 3.706594 TCAGATGGCCAGGACTACTTAAG 59.293 47.826 13.05 0.00 0.00 1.85
2063 2109 3.706594 CAGATGGCCAGGACTACTTAAGA 59.293 47.826 13.05 0.00 0.00 2.10
2064 2110 3.964031 AGATGGCCAGGACTACTTAAGAG 59.036 47.826 13.05 5.02 0.00 2.85
2065 2111 3.185880 TGGCCAGGACTACTTAAGAGT 57.814 47.619 10.09 8.29 39.97 3.24
2066 2112 4.326600 TGGCCAGGACTACTTAAGAGTA 57.673 45.455 10.09 0.00 37.33 2.59
2067 2113 4.880164 TGGCCAGGACTACTTAAGAGTAT 58.120 43.478 10.09 0.00 37.71 2.12
2068 2114 4.894114 TGGCCAGGACTACTTAAGAGTATC 59.106 45.833 10.09 1.19 37.71 2.24
2083 2129 3.886549 GAGTATCTACAACCGGACATCG 58.113 50.000 9.46 0.00 38.88 3.84
2084 2130 2.034305 AGTATCTACAACCGGACATCGC 59.966 50.000 9.46 0.00 37.59 4.58
2085 2131 0.821517 ATCTACAACCGGACATCGCA 59.178 50.000 9.46 0.00 37.59 5.10
2086 2132 0.604073 TCTACAACCGGACATCGCAA 59.396 50.000 9.46 0.00 37.59 4.85
2087 2133 1.001068 TCTACAACCGGACATCGCAAA 59.999 47.619 9.46 0.00 37.59 3.68
2088 2134 2.006888 CTACAACCGGACATCGCAAAT 58.993 47.619 9.46 0.00 37.59 2.32
2089 2135 0.802494 ACAACCGGACATCGCAAATC 59.198 50.000 9.46 0.00 37.59 2.17
2090 2136 0.098728 CAACCGGACATCGCAAATCC 59.901 55.000 9.46 0.00 37.59 3.01
2093 2139 2.715624 GGACATCGCAAATCCGGC 59.284 61.111 0.00 0.00 0.00 6.13
2094 2140 2.715624 GACATCGCAAATCCGGCC 59.284 61.111 0.00 0.00 0.00 6.13
2095 2141 2.828549 ACATCGCAAATCCGGCCC 60.829 61.111 0.00 0.00 0.00 5.80
2096 2142 3.595758 CATCGCAAATCCGGCCCC 61.596 66.667 0.00 0.00 0.00 5.80
2097 2143 4.894896 ATCGCAAATCCGGCCCCC 62.895 66.667 0.00 0.00 0.00 5.40
2100 2146 2.763710 GCAAATCCGGCCCCCAAT 60.764 61.111 0.00 0.00 0.00 3.16
2101 2147 2.796193 GCAAATCCGGCCCCCAATC 61.796 63.158 0.00 0.00 0.00 2.67
2102 2148 2.133641 CAAATCCGGCCCCCAATCC 61.134 63.158 0.00 0.00 0.00 3.01
2103 2149 2.324560 AAATCCGGCCCCCAATCCT 61.325 57.895 0.00 0.00 0.00 3.24
2104 2150 2.588029 AAATCCGGCCCCCAATCCTG 62.588 60.000 0.00 0.00 0.00 3.86
2107 2153 4.883354 CGGCCCCCAATCCTGCTC 62.883 72.222 0.00 0.00 0.00 4.26
2108 2154 3.424105 GGCCCCCAATCCTGCTCT 61.424 66.667 0.00 0.00 0.00 4.09
2109 2155 2.685999 GCCCCCAATCCTGCTCTT 59.314 61.111 0.00 0.00 0.00 2.85
2110 2156 1.000866 GCCCCCAATCCTGCTCTTT 59.999 57.895 0.00 0.00 0.00 2.52
2111 2157 0.615827 GCCCCCAATCCTGCTCTTTT 60.616 55.000 0.00 0.00 0.00 2.27
2112 2158 1.341976 GCCCCCAATCCTGCTCTTTTA 60.342 52.381 0.00 0.00 0.00 1.52
2113 2159 2.659428 CCCCCAATCCTGCTCTTTTAG 58.341 52.381 0.00 0.00 0.00 1.85
2114 2160 2.242196 CCCCCAATCCTGCTCTTTTAGA 59.758 50.000 0.00 0.00 0.00 2.10
2115 2161 3.549794 CCCCAATCCTGCTCTTTTAGAG 58.450 50.000 0.00 0.00 45.04 2.43
2128 2174 6.184580 CTCTTTTAGAGCAACTCTAGTCGA 57.815 41.667 4.64 0.00 42.92 4.20
2129 2175 6.761099 TCTTTTAGAGCAACTCTAGTCGAT 57.239 37.500 4.64 0.00 42.92 3.59
2130 2176 6.787225 TCTTTTAGAGCAACTCTAGTCGATC 58.213 40.000 4.64 0.00 42.92 3.69
2131 2177 5.502153 TTTAGAGCAACTCTAGTCGATCC 57.498 43.478 4.64 0.00 42.92 3.36
2132 2178 2.303175 AGAGCAACTCTAGTCGATCCC 58.697 52.381 0.00 0.00 39.28 3.85
2133 2179 2.025155 GAGCAACTCTAGTCGATCCCA 58.975 52.381 0.00 0.00 0.00 4.37
2134 2180 2.427453 GAGCAACTCTAGTCGATCCCAA 59.573 50.000 0.00 0.00 0.00 4.12
2135 2181 2.428890 AGCAACTCTAGTCGATCCCAAG 59.571 50.000 0.00 0.00 0.00 3.61
2136 2182 2.427453 GCAACTCTAGTCGATCCCAAGA 59.573 50.000 0.00 0.00 0.00 3.02
2137 2183 3.490078 GCAACTCTAGTCGATCCCAAGAG 60.490 52.174 0.00 0.00 39.65 2.85
2138 2184 2.303175 ACTCTAGTCGATCCCAAGAGC 58.697 52.381 10.49 0.00 37.75 4.09
2139 2185 2.302260 CTCTAGTCGATCCCAAGAGCA 58.698 52.381 0.00 0.00 0.00 4.26
2140 2186 2.690497 CTCTAGTCGATCCCAAGAGCAA 59.310 50.000 0.00 0.00 0.00 3.91
2141 2187 2.427453 TCTAGTCGATCCCAAGAGCAAC 59.573 50.000 0.00 0.00 0.00 4.17
2142 2188 1.270907 AGTCGATCCCAAGAGCAACT 58.729 50.000 0.00 0.00 0.00 3.16
2143 2189 1.205893 AGTCGATCCCAAGAGCAACTC 59.794 52.381 0.00 0.00 0.00 3.01
2144 2190 1.205893 GTCGATCCCAAGAGCAACTCT 59.794 52.381 0.00 0.00 43.37 3.24
2145 2191 2.427453 GTCGATCCCAAGAGCAACTCTA 59.573 50.000 0.00 0.00 40.28 2.43
2146 2192 2.690497 TCGATCCCAAGAGCAACTCTAG 59.310 50.000 0.00 0.00 40.28 2.43
2147 2193 2.428890 CGATCCCAAGAGCAACTCTAGT 59.571 50.000 0.00 0.00 40.28 2.57
2148 2194 3.490078 CGATCCCAAGAGCAACTCTAGTC 60.490 52.174 0.00 0.00 40.28 2.59
2149 2195 1.819288 TCCCAAGAGCAACTCTAGTCG 59.181 52.381 0.00 0.00 40.28 4.18
2150 2196 1.819288 CCCAAGAGCAACTCTAGTCGA 59.181 52.381 0.00 0.00 40.28 4.20
2151 2197 2.428890 CCCAAGAGCAACTCTAGTCGAT 59.571 50.000 0.00 0.00 40.28 3.59
2152 2198 3.490078 CCCAAGAGCAACTCTAGTCGATC 60.490 52.174 0.00 0.00 40.28 3.69
2153 2199 3.490078 CCAAGAGCAACTCTAGTCGATCC 60.490 52.174 0.00 0.00 40.28 3.36
2154 2200 2.303175 AGAGCAACTCTAGTCGATCCC 58.697 52.381 0.00 0.00 39.28 3.85
2155 2201 1.338655 GAGCAACTCTAGTCGATCCCC 59.661 57.143 0.00 0.00 0.00 4.81
2156 2202 1.063567 AGCAACTCTAGTCGATCCCCT 60.064 52.381 0.00 0.00 0.00 4.79
2157 2203 2.175069 AGCAACTCTAGTCGATCCCCTA 59.825 50.000 0.00 0.00 0.00 3.53
2158 2204 2.957006 GCAACTCTAGTCGATCCCCTAA 59.043 50.000 0.00 0.00 0.00 2.69
2159 2205 3.383825 GCAACTCTAGTCGATCCCCTAAA 59.616 47.826 0.00 0.00 0.00 1.85
2160 2206 4.500035 GCAACTCTAGTCGATCCCCTAAAG 60.500 50.000 0.00 0.00 0.00 1.85
2161 2207 3.834938 ACTCTAGTCGATCCCCTAAAGG 58.165 50.000 0.00 0.00 0.00 3.11
2162 2208 3.204831 ACTCTAGTCGATCCCCTAAAGGT 59.795 47.826 0.00 0.00 0.00 3.50
2163 2209 3.822167 CTCTAGTCGATCCCCTAAAGGTC 59.178 52.174 0.00 0.00 0.00 3.85
2164 2210 2.850695 AGTCGATCCCCTAAAGGTCT 57.149 50.000 0.00 0.00 0.00 3.85
2165 2211 2.668625 AGTCGATCCCCTAAAGGTCTC 58.331 52.381 0.00 0.00 0.00 3.36
2166 2212 2.245287 AGTCGATCCCCTAAAGGTCTCT 59.755 50.000 0.00 0.00 0.00 3.10
2167 2213 2.362717 GTCGATCCCCTAAAGGTCTCTG 59.637 54.545 0.00 0.00 0.00 3.35
2168 2214 2.243994 TCGATCCCCTAAAGGTCTCTGA 59.756 50.000 0.00 0.00 0.00 3.27
2169 2215 3.117093 TCGATCCCCTAAAGGTCTCTGAT 60.117 47.826 0.00 0.00 0.00 2.90
2170 2216 3.257127 CGATCCCCTAAAGGTCTCTGATC 59.743 52.174 0.00 0.00 0.00 2.92
2171 2217 3.047695 TCCCCTAAAGGTCTCTGATCC 57.952 52.381 0.00 0.00 0.00 3.36
2172 2218 2.050918 CCCCTAAAGGTCTCTGATCCC 58.949 57.143 0.00 0.00 0.00 3.85
2173 2219 2.360854 CCCCTAAAGGTCTCTGATCCCT 60.361 54.545 0.00 0.00 0.00 4.20
2174 2220 3.116707 CCCCTAAAGGTCTCTGATCCCTA 60.117 52.174 0.00 0.00 0.00 3.53
2175 2221 4.557705 CCCTAAAGGTCTCTGATCCCTAA 58.442 47.826 0.00 0.00 0.00 2.69
2176 2222 4.969359 CCCTAAAGGTCTCTGATCCCTAAA 59.031 45.833 0.00 0.00 0.00 1.85
2177 2223 5.071115 CCCTAAAGGTCTCTGATCCCTAAAG 59.929 48.000 0.00 0.00 0.00 1.85
2178 2224 5.071115 CCTAAAGGTCTCTGATCCCTAAAGG 59.929 48.000 0.00 8.00 0.00 3.11
2179 2225 3.786213 AGGTCTCTGATCCCTAAAGGT 57.214 47.619 0.00 0.00 36.75 3.50
2180 2226 3.648739 AGGTCTCTGATCCCTAAAGGTC 58.351 50.000 0.00 0.00 36.75 3.85
2181 2227 3.273618 AGGTCTCTGATCCCTAAAGGTCT 59.726 47.826 0.00 0.00 36.75 3.85
2182 2228 4.482772 AGGTCTCTGATCCCTAAAGGTCTA 59.517 45.833 0.00 0.00 36.75 2.59
2183 2229 4.585581 GGTCTCTGATCCCTAAAGGTCTAC 59.414 50.000 0.00 0.00 36.75 2.59
2184 2230 5.202004 GTCTCTGATCCCTAAAGGTCTACA 58.798 45.833 0.00 0.00 36.75 2.74
2185 2231 5.300792 GTCTCTGATCCCTAAAGGTCTACAG 59.699 48.000 0.00 0.00 36.75 2.74
2186 2232 5.193930 TCTCTGATCCCTAAAGGTCTACAGA 59.806 44.000 0.00 0.00 36.75 3.41
2187 2233 5.450453 TCTGATCCCTAAAGGTCTACAGAG 58.550 45.833 0.00 0.00 36.75 3.35
2188 2234 5.193930 TCTGATCCCTAAAGGTCTACAGAGA 59.806 44.000 0.00 0.00 36.75 3.10
2189 2235 5.838955 TGATCCCTAAAGGTCTACAGAGAA 58.161 41.667 0.00 0.00 36.75 2.87
2190 2236 6.261435 TGATCCCTAAAGGTCTACAGAGAAA 58.739 40.000 0.00 0.00 36.75 2.52
2191 2237 6.903534 TGATCCCTAAAGGTCTACAGAGAAAT 59.096 38.462 0.00 0.00 36.75 2.17
2192 2238 8.065627 TGATCCCTAAAGGTCTACAGAGAAATA 58.934 37.037 0.00 0.00 36.75 1.40
2193 2239 8.855804 ATCCCTAAAGGTCTACAGAGAAATAA 57.144 34.615 0.00 0.00 36.75 1.40
2194 2240 8.674925 TCCCTAAAGGTCTACAGAGAAATAAA 57.325 34.615 0.00 0.00 36.75 1.40
2195 2241 9.108111 TCCCTAAAGGTCTACAGAGAAATAAAA 57.892 33.333 0.00 0.00 36.75 1.52
2196 2242 9.907229 CCCTAAAGGTCTACAGAGAAATAAAAT 57.093 33.333 0.00 0.00 31.96 1.82
2205 2251 9.151471 TCTACAGAGAAATAAAATTTCACTCCG 57.849 33.333 13.29 5.73 29.17 4.63
2206 2252 6.612306 ACAGAGAAATAAAATTTCACTCCGC 58.388 36.000 13.29 0.00 29.17 5.54
2207 2253 6.206634 ACAGAGAAATAAAATTTCACTCCGCA 59.793 34.615 13.29 0.00 29.17 5.69
2208 2254 6.524586 CAGAGAAATAAAATTTCACTCCGCAC 59.475 38.462 13.29 0.00 29.17 5.34
2209 2255 6.431234 AGAGAAATAAAATTTCACTCCGCACT 59.569 34.615 13.29 0.00 0.00 4.40
2210 2256 6.981722 AGAAATAAAATTTCACTCCGCACTT 58.018 32.000 13.29 0.00 0.00 3.16
2211 2257 8.106247 AGAAATAAAATTTCACTCCGCACTTA 57.894 30.769 13.29 0.00 0.00 2.24
2212 2258 8.237267 AGAAATAAAATTTCACTCCGCACTTAG 58.763 33.333 13.29 0.00 0.00 2.18
2213 2259 3.831715 AAATTTCACTCCGCACTTAGC 57.168 42.857 0.00 0.00 40.87 3.09
2214 2260 2.770164 ATTTCACTCCGCACTTAGCT 57.230 45.000 0.00 0.00 42.61 3.32
2215 2261 1.795768 TTTCACTCCGCACTTAGCTG 58.204 50.000 0.00 0.00 42.61 4.24
2216 2262 0.037326 TTCACTCCGCACTTAGCTGG 60.037 55.000 0.00 0.00 42.61 4.85
2217 2263 0.898326 TCACTCCGCACTTAGCTGGA 60.898 55.000 0.00 0.00 41.42 3.86
2219 2265 4.113617 TCCGCACTTAGCTGGAGT 57.886 55.556 0.00 0.00 39.72 3.85
2220 2266 1.890894 TCCGCACTTAGCTGGAGTC 59.109 57.895 0.00 0.00 39.72 3.36
2221 2267 0.612174 TCCGCACTTAGCTGGAGTCT 60.612 55.000 0.00 0.00 39.72 3.24
2222 2268 1.103803 CCGCACTTAGCTGGAGTCTA 58.896 55.000 0.00 0.00 42.61 2.59
2223 2269 1.476891 CCGCACTTAGCTGGAGTCTAA 59.523 52.381 0.00 0.00 42.61 2.10
2224 2270 2.094182 CCGCACTTAGCTGGAGTCTAAA 60.094 50.000 0.00 0.00 42.61 1.85
2225 2271 3.430929 CCGCACTTAGCTGGAGTCTAAAT 60.431 47.826 0.00 0.00 42.61 1.40
2226 2272 4.202121 CCGCACTTAGCTGGAGTCTAAATA 60.202 45.833 0.00 0.00 42.61 1.40
2227 2273 5.509840 CCGCACTTAGCTGGAGTCTAAATAT 60.510 44.000 0.00 0.00 42.61 1.28
2228 2274 6.294564 CCGCACTTAGCTGGAGTCTAAATATA 60.295 42.308 0.00 0.00 42.61 0.86
2229 2275 6.583050 CGCACTTAGCTGGAGTCTAAATATAC 59.417 42.308 0.00 0.00 42.61 1.47
2230 2276 6.869388 GCACTTAGCTGGAGTCTAAATATACC 59.131 42.308 0.00 0.00 41.15 2.73
2231 2277 7.379750 CACTTAGCTGGAGTCTAAATATACCC 58.620 42.308 0.00 0.00 0.00 3.69
2232 2278 6.208994 ACTTAGCTGGAGTCTAAATATACCCG 59.791 42.308 0.00 0.00 0.00 5.28
2233 2279 4.737578 AGCTGGAGTCTAAATATACCCGA 58.262 43.478 0.00 0.00 0.00 5.14
2234 2280 5.334421 AGCTGGAGTCTAAATATACCCGAT 58.666 41.667 0.00 0.00 0.00 4.18
2235 2281 5.186021 AGCTGGAGTCTAAATATACCCGATG 59.814 44.000 0.00 0.00 0.00 3.84
2236 2282 5.401531 TGGAGTCTAAATATACCCGATGC 57.598 43.478 0.00 0.00 0.00 3.91
2237 2283 4.222145 TGGAGTCTAAATATACCCGATGCC 59.778 45.833 0.00 0.00 0.00 4.40
2238 2284 4.382793 GGAGTCTAAATATACCCGATGCCC 60.383 50.000 0.00 0.00 0.00 5.36
2239 2285 3.194968 AGTCTAAATATACCCGATGCCCG 59.805 47.826 0.00 0.00 38.18 6.13
2240 2286 2.093869 TCTAAATATACCCGATGCCCGC 60.094 50.000 0.00 0.00 36.84 6.13
2241 2287 0.672401 AAATATACCCGATGCCCGCG 60.672 55.000 0.00 0.00 36.84 6.46
2242 2288 3.659089 ATATACCCGATGCCCGCGC 62.659 63.158 0.00 0.00 36.84 6.86
2254 2300 3.115892 CCGCGCTGCCGAGTAAAA 61.116 61.111 5.56 0.00 36.29 1.52
2255 2301 2.673114 CCGCGCTGCCGAGTAAAAA 61.673 57.895 5.56 0.00 36.29 1.94
2256 2302 1.509162 CGCGCTGCCGAGTAAAAAC 60.509 57.895 5.56 0.00 36.29 2.43
2257 2303 1.866925 GCGCTGCCGAGTAAAAACT 59.133 52.632 0.00 0.00 36.29 2.66
2258 2304 0.452784 GCGCTGCCGAGTAAAAACTG 60.453 55.000 0.00 0.00 36.29 3.16
2259 2305 0.165944 CGCTGCCGAGTAAAAACTGG 59.834 55.000 0.00 0.00 36.29 4.00
2260 2306 0.109735 GCTGCCGAGTAAAAACTGGC 60.110 55.000 10.26 10.26 45.91 4.85
2261 2307 0.521735 CTGCCGAGTAAAAACTGGCC 59.478 55.000 0.00 0.00 45.12 5.36
2262 2308 0.891904 TGCCGAGTAAAAACTGGCCC 60.892 55.000 0.00 0.00 45.12 5.80
2263 2309 1.918868 GCCGAGTAAAAACTGGCCCG 61.919 60.000 0.00 0.00 39.83 6.13
2264 2310 1.500396 CGAGTAAAAACTGGCCCGC 59.500 57.895 0.00 0.00 0.00 6.13
2265 2311 1.880894 GAGTAAAAACTGGCCCGCC 59.119 57.895 0.00 0.00 0.00 6.13
2266 2312 0.608308 GAGTAAAAACTGGCCCGCCT 60.608 55.000 7.35 0.00 36.94 5.52
2267 2313 0.608308 AGTAAAAACTGGCCCGCCTC 60.608 55.000 7.35 0.00 36.94 4.70
2268 2314 0.608308 GTAAAAACTGGCCCGCCTCT 60.608 55.000 7.35 0.00 36.94 3.69
2269 2315 0.111639 TAAAAACTGGCCCGCCTCTT 59.888 50.000 7.35 0.00 36.94 2.85
2270 2316 0.759060 AAAAACTGGCCCGCCTCTTT 60.759 50.000 7.35 1.68 36.94 2.52
2271 2317 1.179174 AAAACTGGCCCGCCTCTTTC 61.179 55.000 7.35 0.00 36.94 2.62
2272 2318 2.069165 AAACTGGCCCGCCTCTTTCT 62.069 55.000 7.35 0.00 36.94 2.52
2273 2319 2.124942 CTGGCCCGCCTCTTTCTC 60.125 66.667 7.35 0.00 36.94 2.87
2274 2320 3.689002 CTGGCCCGCCTCTTTCTCC 62.689 68.421 7.35 0.00 36.94 3.71
2275 2321 4.491409 GGCCCGCCTCTTTCTCCC 62.491 72.222 0.00 0.00 0.00 4.30
2276 2322 4.840005 GCCCGCCTCTTTCTCCCG 62.840 72.222 0.00 0.00 0.00 5.14
2277 2323 4.840005 CCCGCCTCTTTCTCCCGC 62.840 72.222 0.00 0.00 0.00 6.13
2278 2324 4.082523 CCGCCTCTTTCTCCCGCA 62.083 66.667 0.00 0.00 0.00 5.69
2279 2325 2.187946 CGCCTCTTTCTCCCGCAT 59.812 61.111 0.00 0.00 0.00 4.73
2280 2326 1.450312 CGCCTCTTTCTCCCGCATT 60.450 57.895 0.00 0.00 0.00 3.56
2281 2327 1.432270 CGCCTCTTTCTCCCGCATTC 61.432 60.000 0.00 0.00 0.00 2.67
2282 2328 1.432270 GCCTCTTTCTCCCGCATTCG 61.432 60.000 0.00 0.00 0.00 3.34
2283 2329 1.432270 CCTCTTTCTCCCGCATTCGC 61.432 60.000 0.00 0.00 0.00 4.70
2284 2330 0.460987 CTCTTTCTCCCGCATTCGCT 60.461 55.000 0.00 0.00 35.30 4.93
2285 2331 0.740868 TCTTTCTCCCGCATTCGCTG 60.741 55.000 0.00 0.00 35.30 5.18
2294 2340 3.900855 CATTCGCTGCTGCTTCCT 58.099 55.556 14.03 0.00 36.97 3.36
2295 2341 2.177950 CATTCGCTGCTGCTTCCTT 58.822 52.632 14.03 0.00 36.97 3.36
2296 2342 0.098376 CATTCGCTGCTGCTTCCTTC 59.902 55.000 14.03 0.00 36.97 3.46
2297 2343 1.028868 ATTCGCTGCTGCTTCCTTCC 61.029 55.000 14.03 0.00 36.97 3.46
2298 2344 3.130160 CGCTGCTGCTTCCTTCCC 61.130 66.667 14.03 0.00 36.97 3.97
2299 2345 3.130160 GCTGCTGCTTCCTTCCCG 61.130 66.667 8.53 0.00 36.03 5.14
2300 2346 3.130160 CTGCTGCTTCCTTCCCGC 61.130 66.667 0.00 0.00 0.00 6.13
2301 2347 4.722700 TGCTGCTTCCTTCCCGCC 62.723 66.667 0.00 0.00 0.00 6.13
2303 2349 4.394712 CTGCTTCCTTCCCGCCGT 62.395 66.667 0.00 0.00 0.00 5.68
2304 2350 4.388499 TGCTTCCTTCCCGCCGTC 62.388 66.667 0.00 0.00 0.00 4.79
2305 2351 4.388499 GCTTCCTTCCCGCCGTCA 62.388 66.667 0.00 0.00 0.00 4.35
2306 2352 2.584608 CTTCCTTCCCGCCGTCAT 59.415 61.111 0.00 0.00 0.00 3.06
2307 2353 1.078426 CTTCCTTCCCGCCGTCATT 60.078 57.895 0.00 0.00 0.00 2.57
2308 2354 1.369091 CTTCCTTCCCGCCGTCATTG 61.369 60.000 0.00 0.00 0.00 2.82
2309 2355 3.508840 CCTTCCCGCCGTCATTGC 61.509 66.667 0.00 0.00 0.00 3.56
2310 2356 3.508840 CTTCCCGCCGTCATTGCC 61.509 66.667 0.00 0.00 0.00 4.52
2333 2379 4.728102 CGCCACCGTCGCCACTAA 62.728 66.667 0.00 0.00 0.00 2.24
2334 2380 2.125269 GCCACCGTCGCCACTAAT 60.125 61.111 0.00 0.00 0.00 1.73
2335 2381 2.461110 GCCACCGTCGCCACTAATG 61.461 63.158 0.00 0.00 0.00 1.90
2336 2382 1.216977 CCACCGTCGCCACTAATGA 59.783 57.895 0.00 0.00 0.00 2.57
2337 2383 1.082117 CCACCGTCGCCACTAATGAC 61.082 60.000 0.00 0.00 0.00 3.06
2338 2384 0.108804 CACCGTCGCCACTAATGACT 60.109 55.000 0.00 0.00 0.00 3.41
2339 2385 0.108804 ACCGTCGCCACTAATGACTG 60.109 55.000 0.00 0.00 0.00 3.51
2340 2386 0.108804 CCGTCGCCACTAATGACTGT 60.109 55.000 0.00 0.00 0.00 3.55
2341 2387 1.269166 CGTCGCCACTAATGACTGTC 58.731 55.000 0.00 0.00 0.00 3.51
2342 2388 1.641577 GTCGCCACTAATGACTGTCC 58.358 55.000 5.17 0.00 0.00 4.02
2343 2389 0.535335 TCGCCACTAATGACTGTCCC 59.465 55.000 5.17 0.00 0.00 4.46
2344 2390 0.806102 CGCCACTAATGACTGTCCCG 60.806 60.000 5.17 0.00 0.00 5.14
2345 2391 0.249398 GCCACTAATGACTGTCCCGT 59.751 55.000 5.17 0.00 0.00 5.28
2346 2392 1.739371 GCCACTAATGACTGTCCCGTC 60.739 57.143 5.17 0.00 34.52 4.79
2347 2393 1.469251 CCACTAATGACTGTCCCGTCG 60.469 57.143 5.17 0.00 36.71 5.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 4.552166 ACACTTTGTCCATTGTTCTTCG 57.448 40.909 0.00 0.00 0.00 3.79
65 66 3.071602 AGCTGACATGAACTGGTTACACT 59.928 43.478 0.00 0.00 0.00 3.55
66 67 3.403038 AGCTGACATGAACTGGTTACAC 58.597 45.455 0.00 0.00 0.00 2.90
86 90 1.347707 TGGCCTTCCACTGAACTGTAG 59.652 52.381 3.32 0.00 37.47 2.74
180 188 4.703645 TCAGATCGGATCGACAATATCC 57.296 45.455 12.08 0.00 39.18 2.59
181 189 5.277825 GGATCAGATCGGATCGACAATATC 58.722 45.833 23.84 8.62 43.69 1.63
183 191 3.444034 GGGATCAGATCGGATCGACAATA 59.556 47.826 23.84 0.00 43.69 1.90
189 198 1.615883 ACAAGGGATCAGATCGGATCG 59.384 52.381 23.84 15.16 43.69 3.69
199 208 1.741028 TTCAGGGTGACAAGGGATCA 58.259 50.000 0.00 0.00 0.00 2.92
204 216 2.930950 TGAACTTTCAGGGTGACAAGG 58.069 47.619 0.00 0.00 32.50 3.61
212 224 4.580580 ACTGTAAAGCTTGAACTTTCAGGG 59.419 41.667 0.00 0.00 40.32 4.45
223 235 4.156739 GGGATTTCAGGACTGTAAAGCTTG 59.843 45.833 0.00 0.00 0.00 4.01
230 242 2.758979 GAGACGGGATTTCAGGACTGTA 59.241 50.000 0.00 0.00 0.00 2.74
236 248 1.550524 TCAGTGAGACGGGATTTCAGG 59.449 52.381 0.00 0.00 0.00 3.86
244 256 0.390472 GGAAAGCTCAGTGAGACGGG 60.390 60.000 24.55 0.00 0.00 5.28
246 258 1.543802 AGAGGAAAGCTCAGTGAGACG 59.456 52.381 24.55 0.00 0.00 4.18
316 329 5.353111 GCTTCCTTTCCAGACAGATACTAC 58.647 45.833 0.00 0.00 0.00 2.73
317 330 4.098044 CGCTTCCTTTCCAGACAGATACTA 59.902 45.833 0.00 0.00 0.00 1.82
318 331 3.118956 CGCTTCCTTTCCAGACAGATACT 60.119 47.826 0.00 0.00 0.00 2.12
339 352 5.590259 AGTTCATCCCAACTCAATAATTCCG 59.410 40.000 0.00 0.00 30.25 4.30
348 361 0.038166 GGCCAGTTCATCCCAACTCA 59.962 55.000 0.00 0.00 34.17 3.41
396 409 2.027625 CGTGCCCGTTTGGTCTCTC 61.028 63.158 0.00 0.00 36.04 3.20
459 472 2.675423 GGGCGGGGTTGGAAGAAC 60.675 66.667 0.00 0.00 0.00 3.01
460 473 4.338710 CGGGCGGGGTTGGAAGAA 62.339 66.667 0.00 0.00 0.00 2.52
490 503 1.064017 TGGGGGCATTGGACTAATCAC 60.064 52.381 0.00 0.00 0.00 3.06
505 518 1.689412 GGTGGGTTTAGTCTGGGGG 59.311 63.158 0.00 0.00 0.00 5.40
568 581 2.488347 GCGGCTCTATTTTGGGGGATAA 60.488 50.000 0.00 0.00 0.00 1.75
569 582 1.073284 GCGGCTCTATTTTGGGGGATA 59.927 52.381 0.00 0.00 0.00 2.59
675 689 2.202756 GACGACCGAGATGGCCAC 60.203 66.667 8.16 1.58 43.94 5.01
688 702 3.803082 CGGTAGGCGAACGGACGA 61.803 66.667 0.00 0.00 35.09 4.20
1203 1223 0.744771 TGTGTTACAGCACGCACCAA 60.745 50.000 0.00 0.00 41.94 3.67
1217 1247 1.001641 GAGATGGGCAGCCTGTGTT 60.002 57.895 12.43 0.00 0.00 3.32
1218 1248 2.673523 GAGATGGGCAGCCTGTGT 59.326 61.111 12.43 0.00 0.00 3.72
1219 1249 2.513204 CGAGATGGGCAGCCTGTG 60.513 66.667 12.43 0.00 0.00 3.66
1355 1385 2.415010 CGAGCGGTCCCTGATCAG 59.585 66.667 16.24 16.24 0.00 2.90
1403 1433 0.806868 AATCTGCGGACATGTGCAAG 59.193 50.000 18.05 13.55 41.22 4.01
1438 1468 2.930040 CTGCGAACATATGTTTCGAGGT 59.070 45.455 28.62 8.62 38.56 3.85
1513 1546 1.726791 CACAGGAACGATCGAACCAAG 59.273 52.381 24.34 19.84 0.00 3.61
1544 1577 7.521529 AGTAAAGTCACAATCATCAAACATCG 58.478 34.615 0.00 0.00 0.00 3.84
1571 1604 1.607713 CAGTCGCTAACAGTCACGAG 58.392 55.000 0.00 0.00 34.83 4.18
1609 1642 4.396166 ACAAATAACAGCCGAAGAATCTGG 59.604 41.667 0.00 0.00 32.42 3.86
1671 1716 2.719739 AGCCCAGTGATCAACATCAAG 58.280 47.619 0.00 0.00 40.90 3.02
1693 1739 5.012148 GGCCAGATATACTCTTAAGGCAGAA 59.988 44.000 0.00 0.00 40.65 3.02
1694 1740 4.528596 GGCCAGATATACTCTTAAGGCAGA 59.471 45.833 0.00 0.00 40.65 4.26
1785 1831 3.739080 ATGGTAGGGCCTGGGAGGG 62.739 68.421 18.53 0.00 35.37 4.30
1786 1832 2.039405 ATGGTAGGGCCTGGGAGG 60.039 66.667 18.53 0.00 38.80 4.30
1787 1833 2.511452 CGATGGTAGGGCCTGGGAG 61.511 68.421 18.53 0.00 38.35 4.30
1788 1834 2.445845 CGATGGTAGGGCCTGGGA 60.446 66.667 18.53 0.00 38.35 4.37
1789 1835 3.560251 CCGATGGTAGGGCCTGGG 61.560 72.222 18.53 3.75 38.35 4.45
1790 1836 3.560251 CCCGATGGTAGGGCCTGG 61.560 72.222 18.53 7.41 42.77 4.45
1796 1842 1.129058 AAAGTAGGCCCGATGGTAGG 58.871 55.000 0.00 0.00 0.00 3.18
1797 1843 2.169769 TGAAAAGTAGGCCCGATGGTAG 59.830 50.000 0.00 0.00 0.00 3.18
1798 1844 2.189676 TGAAAAGTAGGCCCGATGGTA 58.810 47.619 0.00 0.00 0.00 3.25
1799 1845 0.988832 TGAAAAGTAGGCCCGATGGT 59.011 50.000 0.00 0.00 0.00 3.55
1800 1846 2.017049 CTTGAAAAGTAGGCCCGATGG 58.983 52.381 0.00 0.00 39.70 3.51
1809 1855 4.926668 CCAGGCTTGGGCTTGAAAAGTAG 61.927 52.174 7.05 0.00 46.58 2.57
1810 1856 3.080593 CCAGGCTTGGGCTTGAAAAGTA 61.081 50.000 7.05 0.00 46.58 2.24
1811 1857 2.372981 CCAGGCTTGGGCTTGAAAAGT 61.373 52.381 7.05 0.00 46.58 2.66
1812 1858 0.319405 CCAGGCTTGGGCTTGAAAAG 59.681 55.000 7.05 0.00 46.58 2.27
1813 1859 1.757423 GCCAGGCTTGGGCTTGAAAA 61.757 55.000 17.71 0.00 46.58 2.29
1814 1860 2.209315 GCCAGGCTTGGGCTTGAAA 61.209 57.895 17.71 0.00 46.58 2.69
1815 1861 2.601367 GCCAGGCTTGGGCTTGAA 60.601 61.111 17.71 0.00 46.58 2.69
1821 1867 3.747579 AGATGGGCCAGGCTTGGG 61.748 66.667 17.71 0.34 45.16 4.12
1823 1869 1.925285 TACCAGATGGGCCAGGCTTG 61.925 60.000 13.78 10.36 42.05 4.01
1824 1870 1.214305 TTACCAGATGGGCCAGGCTT 61.214 55.000 13.78 0.00 42.05 4.35
1825 1871 0.995675 ATTACCAGATGGGCCAGGCT 60.996 55.000 13.78 9.31 42.05 4.58
1826 1872 0.771127 TATTACCAGATGGGCCAGGC 59.229 55.000 13.78 1.26 42.05 4.85
1827 1873 2.815589 GCTTATTACCAGATGGGCCAGG 60.816 54.545 13.78 10.90 42.05 4.45
1828 1874 2.508526 GCTTATTACCAGATGGGCCAG 58.491 52.381 13.78 0.00 42.05 4.85
1829 1875 1.144913 GGCTTATTACCAGATGGGCCA 59.855 52.381 9.61 9.61 42.05 5.36
1830 1876 1.547901 GGGCTTATTACCAGATGGGCC 60.548 57.143 3.48 0.00 42.05 5.80
1831 1877 1.425448 AGGGCTTATTACCAGATGGGC 59.575 52.381 3.48 0.00 42.05 5.36
1832 1878 4.993705 TTAGGGCTTATTACCAGATGGG 57.006 45.455 3.48 0.00 44.81 4.00
1833 1879 6.239036 GCTTTTTAGGGCTTATTACCAGATGG 60.239 42.308 0.00 0.00 42.17 3.51
1834 1880 6.239036 GGCTTTTTAGGGCTTATTACCAGATG 60.239 42.308 0.00 0.00 0.00 2.90
1835 1881 5.833667 GGCTTTTTAGGGCTTATTACCAGAT 59.166 40.000 0.00 0.00 0.00 2.90
1836 1882 5.198207 GGCTTTTTAGGGCTTATTACCAGA 58.802 41.667 0.00 0.00 0.00 3.86
1837 1883 4.953579 TGGCTTTTTAGGGCTTATTACCAG 59.046 41.667 0.00 0.00 0.00 4.00
1838 1884 4.936802 TGGCTTTTTAGGGCTTATTACCA 58.063 39.130 0.00 0.00 0.00 3.25
1839 1885 6.479972 AATGGCTTTTTAGGGCTTATTACC 57.520 37.500 0.00 0.00 0.00 2.85
1840 1886 7.658261 CCTAATGGCTTTTTAGGGCTTATTAC 58.342 38.462 11.36 0.00 41.30 1.89
1841 1887 7.833285 CCTAATGGCTTTTTAGGGCTTATTA 57.167 36.000 11.36 0.00 41.30 0.98
1842 1888 6.731292 CCTAATGGCTTTTTAGGGCTTATT 57.269 37.500 11.36 0.00 41.30 1.40
1858 1904 2.372172 CCACTACCCTAAGCCCTAATGG 59.628 54.545 0.00 0.00 37.09 3.16
1859 1905 2.224548 GCCACTACCCTAAGCCCTAATG 60.225 54.545 0.00 0.00 0.00 1.90
1860 1906 2.055579 GCCACTACCCTAAGCCCTAAT 58.944 52.381 0.00 0.00 0.00 1.73
1861 1907 1.503800 GCCACTACCCTAAGCCCTAA 58.496 55.000 0.00 0.00 0.00 2.69
1862 1908 0.399519 GGCCACTACCCTAAGCCCTA 60.400 60.000 0.00 0.00 37.66 3.53
1863 1909 1.693103 GGCCACTACCCTAAGCCCT 60.693 63.158 0.00 0.00 37.66 5.19
1864 1910 2.916661 GGCCACTACCCTAAGCCC 59.083 66.667 0.00 0.00 37.66 5.19
1879 1925 2.206182 TTTAAGGAAGAGGCCCGGGC 62.206 60.000 38.57 38.57 41.06 6.13
1880 1926 0.330267 TTTTAAGGAAGAGGCCCGGG 59.670 55.000 19.09 19.09 0.00 5.73
1881 1927 2.024414 CATTTTAAGGAAGAGGCCCGG 58.976 52.381 0.00 0.00 0.00 5.73
1882 1928 1.405463 GCATTTTAAGGAAGAGGCCCG 59.595 52.381 0.00 0.00 0.00 6.13
1883 1929 2.739943 AGCATTTTAAGGAAGAGGCCC 58.260 47.619 0.00 0.00 0.00 5.80
1884 1930 7.597386 CATATTAGCATTTTAAGGAAGAGGCC 58.403 38.462 0.00 0.00 0.00 5.19
1885 1931 7.087007 GCATATTAGCATTTTAAGGAAGAGGC 58.913 38.462 0.00 0.00 0.00 4.70
1886 1932 7.231317 TGGCATATTAGCATTTTAAGGAAGAGG 59.769 37.037 0.00 0.00 35.83 3.69
1887 1933 8.169977 TGGCATATTAGCATTTTAAGGAAGAG 57.830 34.615 0.00 0.00 35.83 2.85
1888 1934 8.532186 TTGGCATATTAGCATTTTAAGGAAGA 57.468 30.769 0.00 0.00 35.83 2.87
1889 1935 7.383300 GCTTGGCATATTAGCATTTTAAGGAAG 59.617 37.037 4.08 0.00 35.05 3.46
1890 1936 7.209475 GCTTGGCATATTAGCATTTTAAGGAA 58.791 34.615 4.08 0.00 35.05 3.36
1891 1937 6.239289 GGCTTGGCATATTAGCATTTTAAGGA 60.239 38.462 10.75 0.00 36.64 3.36
1892 1938 5.928264 GGCTTGGCATATTAGCATTTTAAGG 59.072 40.000 10.75 0.00 36.64 2.69
1893 1939 5.928264 GGGCTTGGCATATTAGCATTTTAAG 59.072 40.000 10.75 0.00 36.64 1.85
1894 1940 5.365025 TGGGCTTGGCATATTAGCATTTTAA 59.635 36.000 10.75 0.00 36.64 1.52
1895 1941 4.898265 TGGGCTTGGCATATTAGCATTTTA 59.102 37.500 10.75 0.00 36.64 1.52
1896 1942 3.710677 TGGGCTTGGCATATTAGCATTTT 59.289 39.130 10.75 0.00 36.64 1.82
1897 1943 3.307506 TGGGCTTGGCATATTAGCATTT 58.692 40.909 10.75 0.00 36.64 2.32
1898 1944 2.961510 TGGGCTTGGCATATTAGCATT 58.038 42.857 10.75 0.00 36.64 3.56
1899 1945 2.681319 TGGGCTTGGCATATTAGCAT 57.319 45.000 10.75 0.00 36.64 3.79
1900 1946 2.309613 CTTGGGCTTGGCATATTAGCA 58.690 47.619 10.75 0.00 36.64 3.49
1901 1947 1.000171 GCTTGGGCTTGGCATATTAGC 60.000 52.381 0.20 0.20 35.22 3.09
1902 1948 1.615392 GGCTTGGGCTTGGCATATTAG 59.385 52.381 0.00 0.00 38.73 1.73
1903 1949 1.703411 GGCTTGGGCTTGGCATATTA 58.297 50.000 0.00 0.00 38.73 0.98
1904 1950 1.050421 GGGCTTGGGCTTGGCATATT 61.050 55.000 0.00 0.00 38.73 1.28
1905 1951 1.458209 GGGCTTGGGCTTGGCATAT 60.458 57.895 0.00 0.00 38.73 1.78
1906 1952 2.043046 GGGCTTGGGCTTGGCATA 60.043 61.111 0.00 0.00 38.73 3.14
1911 1957 4.659172 TGGACGGGCTTGGGCTTG 62.659 66.667 0.00 0.00 38.73 4.01
1912 1958 4.351054 CTGGACGGGCTTGGGCTT 62.351 66.667 0.00 0.00 38.73 4.35
1923 1969 4.335647 ACAAGCAGGGCCTGGACG 62.336 66.667 33.43 10.11 31.21 4.79
1924 1970 2.674380 CACAAGCAGGGCCTGGAC 60.674 66.667 33.43 18.62 31.21 4.02
1925 1971 3.970410 CCACAAGCAGGGCCTGGA 61.970 66.667 33.43 0.00 31.21 3.86
1935 1981 1.949525 TCTGAGTTTTGAGCCACAAGC 59.050 47.619 0.00 0.00 39.77 4.01
1936 1982 2.291741 GGTCTGAGTTTTGAGCCACAAG 59.708 50.000 0.00 0.00 39.77 3.16
1937 1983 2.297701 GGTCTGAGTTTTGAGCCACAA 58.702 47.619 0.00 0.00 36.65 3.33
1938 1984 1.476833 GGGTCTGAGTTTTGAGCCACA 60.477 52.381 6.37 0.00 46.59 4.17
1939 1985 1.239347 GGGTCTGAGTTTTGAGCCAC 58.761 55.000 6.37 0.00 46.59 5.01
1940 1986 3.725754 GGGTCTGAGTTTTGAGCCA 57.274 52.632 6.37 0.00 46.59 4.75
1942 1988 1.268079 GCTTGGGTCTGAGTTTTGAGC 59.732 52.381 0.00 0.00 0.00 4.26
1943 1989 1.882623 GGCTTGGGTCTGAGTTTTGAG 59.117 52.381 0.00 0.00 0.00 3.02
1944 1990 1.478654 GGGCTTGGGTCTGAGTTTTGA 60.479 52.381 0.00 0.00 0.00 2.69
1945 1991 0.961753 GGGCTTGGGTCTGAGTTTTG 59.038 55.000 0.00 0.00 0.00 2.44
1946 1992 0.537371 CGGGCTTGGGTCTGAGTTTT 60.537 55.000 0.00 0.00 0.00 2.43
1947 1993 1.073199 CGGGCTTGGGTCTGAGTTT 59.927 57.895 0.00 0.00 0.00 2.66
1948 1994 2.750350 CGGGCTTGGGTCTGAGTT 59.250 61.111 0.00 0.00 0.00 3.01
1949 1995 3.322466 CCGGGCTTGGGTCTGAGT 61.322 66.667 0.00 0.00 0.00 3.41
1950 1996 4.785453 GCCGGGCTTGGGTCTGAG 62.785 72.222 12.87 0.00 0.00 3.35
1987 2033 1.202940 CCTAAAATCCAGGGCCTAGGC 60.203 57.143 26.55 26.55 41.06 3.93
1988 2034 1.425448 CCCTAAAATCCAGGGCCTAGG 59.575 57.143 5.28 10.90 46.27 3.02
1989 2035 2.959465 CCCTAAAATCCAGGGCCTAG 57.041 55.000 5.28 0.00 46.27 3.02
1995 2041 0.756815 GCCCTGCCCTAAAATCCAGG 60.757 60.000 0.00 0.00 43.47 4.45
1996 2042 0.756815 GGCCCTGCCCTAAAATCCAG 60.757 60.000 0.00 0.00 44.06 3.86
1997 2043 1.309688 GGCCCTGCCCTAAAATCCA 59.690 57.895 0.00 0.00 44.06 3.41
1998 2044 4.277552 GGCCCTGCCCTAAAATCC 57.722 61.111 0.00 0.00 44.06 3.01
2038 2084 0.755686 GTAGTCCTGGCCATCTGAGG 59.244 60.000 5.51 3.08 0.00 3.86
2039 2085 1.786937 AGTAGTCCTGGCCATCTGAG 58.213 55.000 5.51 0.00 0.00 3.35
2040 2086 2.254152 AAGTAGTCCTGGCCATCTGA 57.746 50.000 5.51 0.00 0.00 3.27
2041 2087 3.706594 TCTTAAGTAGTCCTGGCCATCTG 59.293 47.826 5.51 0.00 0.00 2.90
2042 2088 3.964031 CTCTTAAGTAGTCCTGGCCATCT 59.036 47.826 5.51 8.22 0.00 2.90
2043 2089 3.707102 ACTCTTAAGTAGTCCTGGCCATC 59.293 47.826 5.51 0.00 32.59 3.51
2044 2090 3.725634 ACTCTTAAGTAGTCCTGGCCAT 58.274 45.455 5.51 0.00 32.59 4.40
2045 2091 3.185880 ACTCTTAAGTAGTCCTGGCCA 57.814 47.619 4.71 4.71 32.59 5.36
2046 2092 5.141910 AGATACTCTTAAGTAGTCCTGGCC 58.858 45.833 0.00 0.00 41.22 5.36
2047 2093 6.771749 TGTAGATACTCTTAAGTAGTCCTGGC 59.228 42.308 1.63 5.31 41.22 4.85
2048 2094 8.623030 GTTGTAGATACTCTTAAGTAGTCCTGG 58.377 40.741 1.63 0.00 41.22 4.45
2049 2095 8.623030 GGTTGTAGATACTCTTAAGTAGTCCTG 58.377 40.741 1.63 0.00 41.22 3.86
2050 2096 7.498570 CGGTTGTAGATACTCTTAAGTAGTCCT 59.501 40.741 1.63 8.17 41.22 3.85
2051 2097 7.255070 CCGGTTGTAGATACTCTTAAGTAGTCC 60.255 44.444 1.63 2.05 41.22 3.85
2052 2098 7.497249 TCCGGTTGTAGATACTCTTAAGTAGTC 59.503 40.741 0.00 0.00 41.22 2.59
2053 2099 7.281999 GTCCGGTTGTAGATACTCTTAAGTAGT 59.718 40.741 0.00 7.46 41.22 2.73
2054 2100 7.281774 TGTCCGGTTGTAGATACTCTTAAGTAG 59.718 40.741 0.00 1.70 41.22 2.57
2055 2101 7.112122 TGTCCGGTTGTAGATACTCTTAAGTA 58.888 38.462 0.00 0.00 42.10 2.24
2056 2102 5.948162 TGTCCGGTTGTAGATACTCTTAAGT 59.052 40.000 0.00 0.00 39.66 2.24
2057 2103 6.446781 TGTCCGGTTGTAGATACTCTTAAG 57.553 41.667 0.00 0.00 0.00 1.85
2058 2104 6.238566 CGATGTCCGGTTGTAGATACTCTTAA 60.239 42.308 0.00 0.00 33.91 1.85
2059 2105 5.237996 CGATGTCCGGTTGTAGATACTCTTA 59.762 44.000 0.00 0.00 33.91 2.10
2060 2106 4.036498 CGATGTCCGGTTGTAGATACTCTT 59.964 45.833 0.00 0.00 33.91 2.85
2061 2107 3.564644 CGATGTCCGGTTGTAGATACTCT 59.435 47.826 0.00 0.00 33.91 3.24
2062 2108 3.852572 GCGATGTCCGGTTGTAGATACTC 60.853 52.174 0.00 0.00 39.04 2.59
2063 2109 2.034305 GCGATGTCCGGTTGTAGATACT 59.966 50.000 0.00 0.00 39.04 2.12
2064 2110 2.223641 TGCGATGTCCGGTTGTAGATAC 60.224 50.000 0.00 0.00 39.04 2.24
2065 2111 2.025898 TGCGATGTCCGGTTGTAGATA 58.974 47.619 0.00 0.00 39.04 1.98
2066 2112 0.821517 TGCGATGTCCGGTTGTAGAT 59.178 50.000 0.00 0.00 39.04 1.98
2067 2113 0.604073 TTGCGATGTCCGGTTGTAGA 59.396 50.000 0.00 0.00 39.04 2.59
2068 2114 1.434555 TTTGCGATGTCCGGTTGTAG 58.565 50.000 0.00 0.00 39.04 2.74
2069 2115 2.004017 GATTTGCGATGTCCGGTTGTA 58.996 47.619 0.00 0.00 39.04 2.41
2070 2116 0.802494 GATTTGCGATGTCCGGTTGT 59.198 50.000 0.00 0.00 39.04 3.32
2071 2117 0.098728 GGATTTGCGATGTCCGGTTG 59.901 55.000 0.00 0.00 39.04 3.77
2072 2118 2.477880 GGATTTGCGATGTCCGGTT 58.522 52.632 0.00 0.00 39.04 4.44
2073 2119 4.218722 GGATTTGCGATGTCCGGT 57.781 55.556 0.00 0.00 39.04 5.28
2076 2122 2.715624 GCCGGATTTGCGATGTCC 59.284 61.111 5.05 0.00 0.00 4.02
2077 2123 2.715624 GGCCGGATTTGCGATGTC 59.284 61.111 5.05 0.00 0.00 3.06
2078 2124 2.828549 GGGCCGGATTTGCGATGT 60.829 61.111 5.05 0.00 0.00 3.06
2079 2125 3.595758 GGGGCCGGATTTGCGATG 61.596 66.667 5.05 0.00 0.00 3.84
2080 2126 4.894896 GGGGGCCGGATTTGCGAT 62.895 66.667 5.05 0.00 0.00 4.58
2083 2129 2.763710 ATTGGGGGCCGGATTTGC 60.764 61.111 5.05 0.00 0.00 3.68
2084 2130 2.133641 GGATTGGGGGCCGGATTTG 61.134 63.158 5.05 0.00 0.00 2.32
2085 2131 2.282106 GGATTGGGGGCCGGATTT 59.718 61.111 5.05 0.00 0.00 2.17
2086 2132 2.699938 AGGATTGGGGGCCGGATT 60.700 61.111 5.05 0.00 0.00 3.01
2087 2133 3.501911 CAGGATTGGGGGCCGGAT 61.502 66.667 5.05 0.00 0.00 4.18
2090 2136 4.883354 GAGCAGGATTGGGGGCCG 62.883 72.222 0.00 0.00 0.00 6.13
2091 2137 2.520657 AAAGAGCAGGATTGGGGGCC 62.521 60.000 0.00 0.00 0.00 5.80
2092 2138 0.615827 AAAAGAGCAGGATTGGGGGC 60.616 55.000 0.00 0.00 0.00 5.80
2093 2139 2.242196 TCTAAAAGAGCAGGATTGGGGG 59.758 50.000 0.00 0.00 0.00 5.40
2094 2140 3.549794 CTCTAAAAGAGCAGGATTGGGG 58.450 50.000 0.00 0.00 35.30 4.96
2105 2151 6.184580 TCGACTAGAGTTGCTCTAAAAGAG 57.815 41.667 0.00 0.00 41.74 2.85
2106 2152 6.183360 GGATCGACTAGAGTTGCTCTAAAAGA 60.183 42.308 0.00 6.86 41.74 2.52
2107 2153 5.974751 GGATCGACTAGAGTTGCTCTAAAAG 59.025 44.000 0.00 1.24 41.74 2.27
2108 2154 5.163540 GGGATCGACTAGAGTTGCTCTAAAA 60.164 44.000 0.00 0.00 41.74 1.52
2109 2155 4.338682 GGGATCGACTAGAGTTGCTCTAAA 59.661 45.833 0.00 0.00 41.74 1.85
2110 2156 3.884091 GGGATCGACTAGAGTTGCTCTAA 59.116 47.826 0.00 0.00 41.74 2.10
2111 2157 3.118000 TGGGATCGACTAGAGTTGCTCTA 60.118 47.826 0.00 5.84 41.50 2.43
2112 2158 2.303175 GGGATCGACTAGAGTTGCTCT 58.697 52.381 0.00 4.02 43.83 4.09
2113 2159 2.025155 TGGGATCGACTAGAGTTGCTC 58.975 52.381 0.00 0.00 0.00 4.26
2114 2160 2.145397 TGGGATCGACTAGAGTTGCT 57.855 50.000 0.00 0.00 0.00 3.91
2115 2161 2.427453 TCTTGGGATCGACTAGAGTTGC 59.573 50.000 0.00 0.00 0.00 4.17
2116 2162 3.490078 GCTCTTGGGATCGACTAGAGTTG 60.490 52.174 20.14 0.00 35.81 3.16
2117 2163 2.691011 GCTCTTGGGATCGACTAGAGTT 59.309 50.000 20.14 0.00 35.81 3.01
2118 2164 2.303175 GCTCTTGGGATCGACTAGAGT 58.697 52.381 20.14 0.00 35.81 3.24
2119 2165 2.302260 TGCTCTTGGGATCGACTAGAG 58.698 52.381 17.13 17.13 36.33 2.43
2120 2166 2.427453 GTTGCTCTTGGGATCGACTAGA 59.573 50.000 0.00 0.00 0.00 2.43
2121 2167 2.428890 AGTTGCTCTTGGGATCGACTAG 59.571 50.000 0.00 0.00 32.43 2.57
2122 2168 2.427453 GAGTTGCTCTTGGGATCGACTA 59.573 50.000 0.00 0.00 33.83 2.59
2123 2169 1.205893 GAGTTGCTCTTGGGATCGACT 59.794 52.381 0.00 0.00 35.67 4.18
2124 2170 1.205893 AGAGTTGCTCTTGGGATCGAC 59.794 52.381 0.00 0.00 37.60 4.20
2125 2171 1.561643 AGAGTTGCTCTTGGGATCGA 58.438 50.000 0.00 0.00 37.60 3.59
2126 2172 2.428890 ACTAGAGTTGCTCTTGGGATCG 59.571 50.000 3.87 0.00 41.50 3.69
2127 2173 3.490078 CGACTAGAGTTGCTCTTGGGATC 60.490 52.174 3.87 0.00 41.50 3.36
2128 2174 2.428890 CGACTAGAGTTGCTCTTGGGAT 59.571 50.000 3.87 0.00 41.50 3.85
2129 2175 1.819288 CGACTAGAGTTGCTCTTGGGA 59.181 52.381 3.87 0.00 41.50 4.37
2130 2176 1.819288 TCGACTAGAGTTGCTCTTGGG 59.181 52.381 3.87 0.55 41.50 4.12
2131 2177 3.490078 GGATCGACTAGAGTTGCTCTTGG 60.490 52.174 3.87 1.57 41.50 3.61
2132 2178 3.490078 GGGATCGACTAGAGTTGCTCTTG 60.490 52.174 3.87 5.16 41.50 3.02
2133 2179 2.691011 GGGATCGACTAGAGTTGCTCTT 59.309 50.000 3.87 0.00 41.50 2.85
2134 2180 2.303175 GGGATCGACTAGAGTTGCTCT 58.697 52.381 0.00 4.02 43.83 4.09
2135 2181 1.338655 GGGGATCGACTAGAGTTGCTC 59.661 57.143 0.00 0.00 0.00 4.26
2136 2182 1.063567 AGGGGATCGACTAGAGTTGCT 60.064 52.381 0.00 0.00 0.00 3.91
2137 2183 1.404843 AGGGGATCGACTAGAGTTGC 58.595 55.000 0.00 0.00 0.00 4.17
2138 2184 4.038162 CCTTTAGGGGATCGACTAGAGTTG 59.962 50.000 0.00 0.00 0.00 3.16
2139 2185 4.216708 CCTTTAGGGGATCGACTAGAGTT 58.783 47.826 0.00 0.00 0.00 3.01
2140 2186 3.204831 ACCTTTAGGGGATCGACTAGAGT 59.795 47.826 0.00 0.00 40.27 3.24
2141 2187 3.822167 GACCTTTAGGGGATCGACTAGAG 59.178 52.174 0.00 6.10 40.27 2.43
2142 2188 3.462579 AGACCTTTAGGGGATCGACTAGA 59.537 47.826 0.00 0.00 40.27 2.43
2143 2189 3.822167 GAGACCTTTAGGGGATCGACTAG 59.178 52.174 0.10 0.00 40.27 2.57
2144 2190 3.462579 AGAGACCTTTAGGGGATCGACTA 59.537 47.826 0.10 0.00 40.27 2.59
2145 2191 2.245287 AGAGACCTTTAGGGGATCGACT 59.755 50.000 0.10 0.00 40.27 4.18
2146 2192 2.362717 CAGAGACCTTTAGGGGATCGAC 59.637 54.545 0.10 0.00 40.27 4.20
2147 2193 2.243994 TCAGAGACCTTTAGGGGATCGA 59.756 50.000 0.10 0.00 40.27 3.59
2148 2194 2.667470 TCAGAGACCTTTAGGGGATCG 58.333 52.381 0.10 0.00 40.27 3.69
2149 2195 3.580895 GGATCAGAGACCTTTAGGGGATC 59.419 52.174 0.10 4.90 40.27 3.36
2150 2196 3.592865 GGATCAGAGACCTTTAGGGGAT 58.407 50.000 0.10 0.00 40.27 3.85
2151 2197 2.360423 GGGATCAGAGACCTTTAGGGGA 60.360 54.545 0.10 0.00 40.27 4.81
2152 2198 2.050918 GGGATCAGAGACCTTTAGGGG 58.949 57.143 0.10 0.00 40.27 4.79
2153 2199 3.053359 AGGGATCAGAGACCTTTAGGG 57.947 52.381 0.10 0.00 40.27 3.53
2154 2200 5.071115 CCTTTAGGGATCAGAGACCTTTAGG 59.929 48.000 1.22 5.36 38.16 2.69
2155 2201 5.663556 ACCTTTAGGGATCAGAGACCTTTAG 59.336 44.000 0.10 0.86 40.27 1.85
2156 2202 5.600749 ACCTTTAGGGATCAGAGACCTTTA 58.399 41.667 0.10 0.00 40.27 1.85
2157 2203 4.439860 ACCTTTAGGGATCAGAGACCTTT 58.560 43.478 0.10 0.00 40.27 3.11
2158 2204 4.034410 GACCTTTAGGGATCAGAGACCTT 58.966 47.826 0.10 0.00 40.27 3.50
2159 2205 3.273618 AGACCTTTAGGGATCAGAGACCT 59.726 47.826 0.10 1.57 40.27 3.85
2160 2206 3.648739 AGACCTTTAGGGATCAGAGACC 58.351 50.000 0.10 0.00 40.27 3.85
2161 2207 5.202004 TGTAGACCTTTAGGGATCAGAGAC 58.798 45.833 0.10 0.00 40.27 3.36
2162 2208 5.193930 TCTGTAGACCTTTAGGGATCAGAGA 59.806 44.000 0.10 0.00 40.27 3.10
2163 2209 5.450453 TCTGTAGACCTTTAGGGATCAGAG 58.550 45.833 0.10 0.00 40.27 3.35
2164 2210 5.193930 TCTCTGTAGACCTTTAGGGATCAGA 59.806 44.000 0.10 7.60 40.27 3.27
2165 2211 5.450453 TCTCTGTAGACCTTTAGGGATCAG 58.550 45.833 0.10 4.05 40.27 2.90
2166 2212 5.467668 TCTCTGTAGACCTTTAGGGATCA 57.532 43.478 0.10 0.00 40.27 2.92
2167 2213 6.793505 TTTCTCTGTAGACCTTTAGGGATC 57.206 41.667 0.10 0.00 40.27 3.36
2168 2214 8.855804 TTATTTCTCTGTAGACCTTTAGGGAT 57.144 34.615 0.10 0.00 40.27 3.85
2169 2215 8.674925 TTTATTTCTCTGTAGACCTTTAGGGA 57.325 34.615 0.10 0.00 40.27 4.20
2170 2216 9.907229 ATTTTATTTCTCTGTAGACCTTTAGGG 57.093 33.333 0.10 0.00 40.27 3.53
2179 2225 9.151471 CGGAGTGAAATTTTATTTCTCTGTAGA 57.849 33.333 16.81 0.00 33.86 2.59
2180 2226 7.905493 GCGGAGTGAAATTTTATTTCTCTGTAG 59.095 37.037 16.81 10.84 33.86 2.74
2181 2227 7.389330 TGCGGAGTGAAATTTTATTTCTCTGTA 59.611 33.333 16.81 8.33 33.86 2.74
2182 2228 6.206634 TGCGGAGTGAAATTTTATTTCTCTGT 59.793 34.615 16.81 0.70 33.86 3.41
2183 2229 6.524586 GTGCGGAGTGAAATTTTATTTCTCTG 59.475 38.462 16.81 11.24 33.86 3.35
2184 2230 6.431234 AGTGCGGAGTGAAATTTTATTTCTCT 59.569 34.615 13.50 13.50 35.66 3.10
2185 2231 6.612306 AGTGCGGAGTGAAATTTTATTTCTC 58.388 36.000 11.98 9.06 0.00 2.87
2186 2232 6.575162 AGTGCGGAGTGAAATTTTATTTCT 57.425 33.333 11.98 0.00 0.00 2.52
2187 2233 7.008357 GCTAAGTGCGGAGTGAAATTTTATTTC 59.992 37.037 5.42 5.42 0.00 2.17
2188 2234 6.806739 GCTAAGTGCGGAGTGAAATTTTATTT 59.193 34.615 0.00 0.00 0.00 1.40
2189 2235 6.322491 GCTAAGTGCGGAGTGAAATTTTATT 58.678 36.000 0.00 0.00 0.00 1.40
2190 2236 5.880341 GCTAAGTGCGGAGTGAAATTTTAT 58.120 37.500 0.00 0.00 0.00 1.40
2191 2237 5.291293 GCTAAGTGCGGAGTGAAATTTTA 57.709 39.130 0.00 0.00 0.00 1.52
2192 2238 4.160736 GCTAAGTGCGGAGTGAAATTTT 57.839 40.909 0.00 0.00 0.00 1.82
2193 2239 3.831715 GCTAAGTGCGGAGTGAAATTT 57.168 42.857 0.00 0.00 0.00 1.82
2195 2241 6.946173 CTCCAGCTAAGTGCGGAGTGAAAT 62.946 50.000 7.25 0.00 46.86 2.17
2196 2242 5.723163 CTCCAGCTAAGTGCGGAGTGAAA 62.723 52.174 7.25 0.00 46.86 2.69
2197 2243 4.295767 CTCCAGCTAAGTGCGGAGTGAA 62.296 54.545 7.25 0.00 46.86 3.18
2198 2244 2.828643 CTCCAGCTAAGTGCGGAGTGA 61.829 57.143 7.25 0.00 46.86 3.41
2199 2245 0.459237 CTCCAGCTAAGTGCGGAGTG 60.459 60.000 7.25 0.00 46.86 3.51
2200 2246 1.893786 CTCCAGCTAAGTGCGGAGT 59.106 57.895 7.25 0.00 46.86 3.85
2201 2247 4.823276 CTCCAGCTAAGTGCGGAG 57.177 61.111 1.45 1.45 46.89 4.63
2205 2251 6.869388 GGTATATTTAGACTCCAGCTAAGTGC 59.131 42.308 5.70 0.00 43.29 4.40
2206 2252 7.379750 GGGTATATTTAGACTCCAGCTAAGTG 58.620 42.308 5.70 0.00 0.00 3.16
2207 2253 6.208994 CGGGTATATTTAGACTCCAGCTAAGT 59.791 42.308 0.71 0.71 0.00 2.24
2208 2254 6.433404 TCGGGTATATTTAGACTCCAGCTAAG 59.567 42.308 0.00 0.00 0.00 2.18
2209 2255 6.309357 TCGGGTATATTTAGACTCCAGCTAA 58.691 40.000 0.00 0.00 0.00 3.09
2210 2256 5.884322 TCGGGTATATTTAGACTCCAGCTA 58.116 41.667 0.00 0.00 0.00 3.32
2211 2257 4.737578 TCGGGTATATTTAGACTCCAGCT 58.262 43.478 0.00 0.00 0.00 4.24
2212 2258 5.411781 CATCGGGTATATTTAGACTCCAGC 58.588 45.833 0.00 0.00 0.00 4.85
2213 2259 5.411781 GCATCGGGTATATTTAGACTCCAG 58.588 45.833 0.00 0.00 0.00 3.86
2214 2260 4.222145 GGCATCGGGTATATTTAGACTCCA 59.778 45.833 0.00 0.00 0.00 3.86
2215 2261 4.382793 GGGCATCGGGTATATTTAGACTCC 60.383 50.000 0.00 0.00 0.00 3.85
2216 2262 4.677250 CGGGCATCGGGTATATTTAGACTC 60.677 50.000 0.00 0.00 34.75 3.36
2217 2263 3.194968 CGGGCATCGGGTATATTTAGACT 59.805 47.826 0.00 0.00 34.75 3.24
2218 2264 3.518590 CGGGCATCGGGTATATTTAGAC 58.481 50.000 0.00 0.00 34.75 2.59
2219 2265 2.093869 GCGGGCATCGGGTATATTTAGA 60.094 50.000 1.10 0.00 39.69 2.10
2220 2266 2.277084 GCGGGCATCGGGTATATTTAG 58.723 52.381 1.10 0.00 39.69 1.85
2221 2267 1.404449 CGCGGGCATCGGGTATATTTA 60.404 52.381 0.00 0.00 45.17 1.40
2222 2268 0.672401 CGCGGGCATCGGGTATATTT 60.672 55.000 0.00 0.00 45.17 1.40
2223 2269 1.079405 CGCGGGCATCGGGTATATT 60.079 57.895 0.00 0.00 45.17 1.28
2224 2270 2.577059 CGCGGGCATCGGGTATAT 59.423 61.111 0.00 0.00 45.17 0.86
2237 2283 2.673114 TTTTTACTCGGCAGCGCGG 61.673 57.895 8.83 2.11 0.00 6.46
2238 2284 1.509162 GTTTTTACTCGGCAGCGCG 60.509 57.895 0.00 0.00 0.00 6.86
2239 2285 0.452784 CAGTTTTTACTCGGCAGCGC 60.453 55.000 0.00 0.00 0.00 5.92
2240 2286 0.165944 CCAGTTTTTACTCGGCAGCG 59.834 55.000 0.00 0.00 0.00 5.18
2241 2287 0.109735 GCCAGTTTTTACTCGGCAGC 60.110 55.000 11.35 0.00 42.50 5.25
2242 2288 0.521735 GGCCAGTTTTTACTCGGCAG 59.478 55.000 0.00 0.00 44.82 4.85
2243 2289 0.891904 GGGCCAGTTTTTACTCGGCA 60.892 55.000 4.39 0.00 44.82 5.69
2244 2290 1.880894 GGGCCAGTTTTTACTCGGC 59.119 57.895 4.39 0.00 42.21 5.54
2245 2291 1.918868 GCGGGCCAGTTTTTACTCGG 61.919 60.000 4.39 0.00 0.00 4.63
2246 2292 1.500396 GCGGGCCAGTTTTTACTCG 59.500 57.895 4.39 0.00 0.00 4.18
2247 2293 0.608308 AGGCGGGCCAGTTTTTACTC 60.608 55.000 12.97 0.00 38.92 2.59
2248 2294 0.608308 GAGGCGGGCCAGTTTTTACT 60.608 55.000 12.97 0.00 38.92 2.24
2249 2295 0.608308 AGAGGCGGGCCAGTTTTTAC 60.608 55.000 12.97 0.00 38.92 2.01
2250 2296 0.111639 AAGAGGCGGGCCAGTTTTTA 59.888 50.000 12.97 0.00 38.92 1.52
2251 2297 0.759060 AAAGAGGCGGGCCAGTTTTT 60.759 50.000 12.97 4.02 38.92 1.94
2252 2298 1.152546 AAAGAGGCGGGCCAGTTTT 60.153 52.632 12.97 6.39 38.92 2.43
2253 2299 1.603739 GAAAGAGGCGGGCCAGTTT 60.604 57.895 12.97 10.41 38.92 2.66
2254 2300 2.034221 GAAAGAGGCGGGCCAGTT 59.966 61.111 12.97 1.51 38.92 3.16
2255 2301 2.930562 AGAAAGAGGCGGGCCAGT 60.931 61.111 12.97 0.00 38.92 4.00
2256 2302 2.124942 GAGAAAGAGGCGGGCCAG 60.125 66.667 12.97 0.00 38.92 4.85
2257 2303 3.717294 GGAGAAAGAGGCGGGCCA 61.717 66.667 12.97 0.00 38.92 5.36
2258 2304 4.491409 GGGAGAAAGAGGCGGGCC 62.491 72.222 0.18 0.18 0.00 5.80
2259 2305 4.840005 CGGGAGAAAGAGGCGGGC 62.840 72.222 0.00 0.00 0.00 6.13
2260 2306 4.840005 GCGGGAGAAAGAGGCGGG 62.840 72.222 0.00 0.00 0.00 6.13
2261 2307 2.876368 AATGCGGGAGAAAGAGGCGG 62.876 60.000 0.00 0.00 0.00 6.13
2262 2308 1.432270 GAATGCGGGAGAAAGAGGCG 61.432 60.000 0.00 0.00 0.00 5.52
2263 2309 1.432270 CGAATGCGGGAGAAAGAGGC 61.432 60.000 0.00 0.00 0.00 4.70
2264 2310 1.432270 GCGAATGCGGGAGAAAGAGG 61.432 60.000 0.00 0.00 38.16 3.69
2265 2311 2.009888 GCGAATGCGGGAGAAAGAG 58.990 57.895 0.00 0.00 38.16 2.85
2266 2312 4.201951 GCGAATGCGGGAGAAAGA 57.798 55.556 0.00 0.00 38.16 2.52
2267 2313 2.315038 GCAGCGAATGCGGGAGAAAG 62.315 60.000 0.00 0.00 46.99 2.62
2268 2314 2.398554 GCAGCGAATGCGGGAGAAA 61.399 57.895 0.00 0.00 46.99 2.52
2269 2315 2.819595 GCAGCGAATGCGGGAGAA 60.820 61.111 0.00 0.00 46.99 2.87
2282 2328 3.130160 CGGGAAGGAAGCAGCAGC 61.130 66.667 0.00 0.00 42.56 5.25
2283 2329 3.130160 GCGGGAAGGAAGCAGCAG 61.130 66.667 0.00 0.00 0.00 4.24
2284 2330 4.722700 GGCGGGAAGGAAGCAGCA 62.723 66.667 0.00 0.00 0.00 4.41
2286 2332 4.394712 ACGGCGGGAAGGAAGCAG 62.395 66.667 13.24 0.00 0.00 4.24
2287 2333 4.388499 GACGGCGGGAAGGAAGCA 62.388 66.667 13.24 0.00 0.00 3.91
2288 2334 3.682292 ATGACGGCGGGAAGGAAGC 62.682 63.158 13.24 0.00 0.00 3.86
2289 2335 1.078426 AATGACGGCGGGAAGGAAG 60.078 57.895 13.24 0.00 0.00 3.46
2290 2336 1.376683 CAATGACGGCGGGAAGGAA 60.377 57.895 13.24 0.00 0.00 3.36
2291 2337 2.267642 CAATGACGGCGGGAAGGA 59.732 61.111 13.24 0.00 0.00 3.36
2292 2338 3.508840 GCAATGACGGCGGGAAGG 61.509 66.667 13.24 0.00 0.00 3.46
2293 2339 3.508840 GGCAATGACGGCGGGAAG 61.509 66.667 13.24 0.00 0.00 3.46
2316 2362 4.728102 TTAGTGGCGACGGTGGCG 62.728 66.667 9.04 0.00 37.19 5.69
2317 2363 2.125269 ATTAGTGGCGACGGTGGC 60.125 61.111 6.58 6.58 0.00 5.01
2318 2364 1.082117 GTCATTAGTGGCGACGGTGG 61.082 60.000 0.00 0.00 0.00 4.61
2319 2365 0.108804 AGTCATTAGTGGCGACGGTG 60.109 55.000 0.00 0.00 34.36 4.94
2320 2366 0.108804 CAGTCATTAGTGGCGACGGT 60.109 55.000 0.00 0.00 34.36 4.83
2321 2367 0.108804 ACAGTCATTAGTGGCGACGG 60.109 55.000 0.00 0.00 34.36 4.79
2322 2368 1.269166 GACAGTCATTAGTGGCGACG 58.731 55.000 0.00 0.00 34.36 5.12
2323 2369 1.641577 GGACAGTCATTAGTGGCGAC 58.358 55.000 2.17 0.00 34.53 5.19
2324 2370 0.535335 GGGACAGTCATTAGTGGCGA 59.465 55.000 2.17 0.00 34.53 5.54
2325 2371 0.806102 CGGGACAGTCATTAGTGGCG 60.806 60.000 2.17 0.00 34.53 5.69
2326 2372 0.249398 ACGGGACAGTCATTAGTGGC 59.751 55.000 2.17 0.00 32.72 5.01
2327 2373 1.469251 CGACGGGACAGTCATTAGTGG 60.469 57.143 2.17 0.00 40.98 4.00
2328 2374 1.909376 CGACGGGACAGTCATTAGTG 58.091 55.000 2.17 0.00 40.98 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.