Multiple sequence alignment - TraesCS3B01G162300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G162300 chr3B 100.000 5306 0 0 1 5306 159572346 159567041 0.000000e+00 9799.0
1 TraesCS3B01G162300 chr3B 84.358 537 30 23 1 507 49759918 49759406 1.340000e-130 477.0
2 TraesCS3B01G162300 chr3B 91.803 61 4 1 4748 4807 556948298 556948238 3.410000e-12 84.2
3 TraesCS3B01G162300 chr3D 95.497 1710 54 18 533 2227 108293863 108292162 0.000000e+00 2710.0
4 TraesCS3B01G162300 chr3D 91.641 1950 102 20 3377 5306 108290705 108288797 0.000000e+00 2641.0
5 TraesCS3B01G162300 chr3D 90.040 251 23 1 2346 2594 108291637 108291387 1.840000e-84 324.0
6 TraesCS3B01G162300 chr3D 88.811 143 14 1 2868 3010 108290845 108290705 1.960000e-39 174.0
7 TraesCS3B01G162300 chr3A 89.565 1562 97 35 565 2097 123277894 123279418 0.000000e+00 1921.0
8 TraesCS3B01G162300 chr3A 92.718 1126 66 11 3455 4574 123280601 123281716 0.000000e+00 1611.0
9 TraesCS3B01G162300 chr3A 89.130 552 34 12 1 536 160001247 160001788 0.000000e+00 664.0
10 TraesCS3B01G162300 chr3A 84.497 587 49 11 2280 2833 123279486 123280063 4.670000e-150 542.0
11 TraesCS3B01G162300 chr3A 95.918 98 4 0 5209 5306 123282391 123282488 5.500000e-35 159.0
12 TraesCS3B01G162300 chr3A 92.523 107 8 0 2895 3001 123280492 123280598 2.560000e-33 154.0
13 TraesCS3B01G162300 chr3A 78.322 286 23 18 4912 5195 123282158 123282406 1.190000e-31 148.0
14 TraesCS3B01G162300 chrUn 93.659 1104 44 11 3377 4455 352894676 352893574 0.000000e+00 1628.0
15 TraesCS3B01G162300 chr5A 92.022 539 28 11 1 536 666592551 666592025 0.000000e+00 743.0
16 TraesCS3B01G162300 chr5A 91.418 536 30 11 1 533 571544105 571543583 0.000000e+00 721.0
17 TraesCS3B01G162300 chr5A 81.185 287 46 5 3096 3375 445201648 445201933 1.920000e-54 224.0
18 TraesCS3B01G162300 chr6A 91.636 538 31 10 1 535 50111232 50111758 0.000000e+00 732.0
19 TraesCS3B01G162300 chr6A 88.364 275 28 3 3106 3377 559852220 559852493 1.420000e-85 327.0
20 TraesCS3B01G162300 chr6A 90.164 61 5 1 4748 4807 7150840 7150900 1.580000e-10 78.7
21 TraesCS3B01G162300 chr2B 90.702 570 16 5 1 533 617149558 617150127 0.000000e+00 725.0
22 TraesCS3B01G162300 chr2B 90.175 570 19 6 1 533 369806883 369807452 0.000000e+00 708.0
23 TraesCS3B01G162300 chr1A 91.264 538 31 11 1 533 485015313 485014787 0.000000e+00 719.0
24 TraesCS3B01G162300 chr1A 89.312 552 30 14 1 535 484340082 484340621 0.000000e+00 665.0
25 TraesCS3B01G162300 chr2A 91.231 536 32 9 1 533 89534622 89535145 0.000000e+00 715.0
26 TraesCS3B01G162300 chr2A 90.625 544 37 10 1 541 81016435 81015903 0.000000e+00 710.0
27 TraesCS3B01G162300 chr2A 87.023 393 7 20 1 356 762240678 762241063 2.300000e-108 403.0
28 TraesCS3B01G162300 chr7A 90.522 517 27 15 1 505 51235868 51235362 0.000000e+00 664.0
29 TraesCS3B01G162300 chr6B 88.364 275 27 4 3106 3377 625367863 625368135 5.120000e-85 326.0
30 TraesCS3B01G162300 chr6D 90.040 251 23 2 3128 3377 414781024 414781273 1.840000e-84 324.0
31 TraesCS3B01G162300 chr4D 88.000 275 30 3 3106 3377 121437050 121437324 6.630000e-84 322.0
32 TraesCS3B01G162300 chr4A 88.043 276 28 5 3106 3377 453609213 453609487 6.630000e-84 322.0
33 TraesCS3B01G162300 chr4A 92.982 57 2 1 4748 4802 481413973 481414029 1.220000e-11 82.4
34 TraesCS3B01G162300 chr4A 92.727 55 4 0 4754 4808 720661600 720661546 4.410000e-11 80.5
35 TraesCS3B01G162300 chr4B 87.273 275 32 3 3106 3377 184237877 184238151 1.430000e-80 311.0
36 TraesCS3B01G162300 chr4B 92.857 56 4 0 4747 4802 399190799 399190854 1.220000e-11 82.4
37 TraesCS3B01G162300 chr5D 83.922 255 36 4 3112 3361 259443874 259443620 6.870000e-59 239.0
38 TraesCS3B01G162300 chr7B 84.100 239 36 2 3112 3349 589104941 589104704 4.130000e-56 230.0
39 TraesCS3B01G162300 chr1D 85.116 215 28 4 4094 4306 3958277 3958489 3.220000e-52 217.0
40 TraesCS3B01G162300 chr1B 84.579 214 29 4 4095 4306 6472156 6472367 5.380000e-50 209.0
41 TraesCS3B01G162300 chr1B 92.857 56 4 0 4747 4802 121481185 121481240 1.220000e-11 82.4
42 TraesCS3B01G162300 chr1B 92.857 56 4 0 4747 4802 121603878 121603933 1.220000e-11 82.4
43 TraesCS3B01G162300 chr1B 87.692 65 6 2 4749 4812 667077171 667077108 2.050000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G162300 chr3B 159567041 159572346 5305 True 9799.000000 9799 100.000000 1 5306 1 chr3B.!!$R2 5305
1 TraesCS3B01G162300 chr3B 49759406 49759918 512 True 477.000000 477 84.358000 1 507 1 chr3B.!!$R1 506
2 TraesCS3B01G162300 chr3D 108288797 108293863 5066 True 1462.250000 2710 91.497250 533 5306 4 chr3D.!!$R1 4773
3 TraesCS3B01G162300 chr3A 123277894 123282488 4594 False 755.833333 1921 88.923833 565 5306 6 chr3A.!!$F2 4741
4 TraesCS3B01G162300 chr3A 160001247 160001788 541 False 664.000000 664 89.130000 1 536 1 chr3A.!!$F1 535
5 TraesCS3B01G162300 chrUn 352893574 352894676 1102 True 1628.000000 1628 93.659000 3377 4455 1 chrUn.!!$R1 1078
6 TraesCS3B01G162300 chr5A 666592025 666592551 526 True 743.000000 743 92.022000 1 536 1 chr5A.!!$R2 535
7 TraesCS3B01G162300 chr5A 571543583 571544105 522 True 721.000000 721 91.418000 1 533 1 chr5A.!!$R1 532
8 TraesCS3B01G162300 chr6A 50111232 50111758 526 False 732.000000 732 91.636000 1 535 1 chr6A.!!$F2 534
9 TraesCS3B01G162300 chr2B 617149558 617150127 569 False 725.000000 725 90.702000 1 533 1 chr2B.!!$F2 532
10 TraesCS3B01G162300 chr2B 369806883 369807452 569 False 708.000000 708 90.175000 1 533 1 chr2B.!!$F1 532
11 TraesCS3B01G162300 chr1A 485014787 485015313 526 True 719.000000 719 91.264000 1 533 1 chr1A.!!$R1 532
12 TraesCS3B01G162300 chr1A 484340082 484340621 539 False 665.000000 665 89.312000 1 535 1 chr1A.!!$F1 534
13 TraesCS3B01G162300 chr2A 89534622 89535145 523 False 715.000000 715 91.231000 1 533 1 chr2A.!!$F1 532
14 TraesCS3B01G162300 chr2A 81015903 81016435 532 True 710.000000 710 90.625000 1 541 1 chr2A.!!$R1 540
15 TraesCS3B01G162300 chr7A 51235362 51235868 506 True 664.000000 664 90.522000 1 505 1 chr7A.!!$R1 504

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
595 670 1.028868 GCCAGGCTCACATGTTCCTC 61.029 60.0 3.29 0.0 0.0 3.71 F
1371 1467 0.904649 CCCAATCAGCCTTTTTCCCC 59.095 55.0 0.00 0.0 0.0 4.81 F
3073 4089 0.178906 CCACCCCTCCCACCAATTTT 60.179 55.0 0.00 0.0 0.0 1.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2192 2304 0.037605 AAAGGGTGTCTCCGTTAGCG 60.038 55.0 0.00 0.00 42.57 4.26 R
3110 4126 0.111639 TTTCCCCCAAAACGAGGAGG 59.888 55.0 0.00 0.00 0.00 4.30 R
4843 5931 0.807667 GCAGCGTGCTAGCATGTACT 60.808 55.0 31.97 21.23 40.96 2.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
127 140 1.450134 ATGATGCGGTGCGTGATGT 60.450 52.632 0.00 0.00 0.00 3.06
131 144 3.788766 GCGGTGCGTGATGTGGAC 61.789 66.667 0.00 0.00 0.00 4.02
132 145 3.118454 CGGTGCGTGATGTGGACC 61.118 66.667 0.00 0.00 43.67 4.46
195 208 3.367087 GGAAGATGAGGACGAAGACGAAA 60.367 47.826 0.00 0.00 42.66 3.46
246 262 7.156876 TGTGTCTTTCATGTCTTGAACTTTT 57.843 32.000 0.80 0.00 43.99 2.27
392 460 1.297598 GCGCGCGCTGTATTTTGAT 60.298 52.632 44.38 0.00 38.26 2.57
595 670 1.028868 GCCAGGCTCACATGTTCCTC 61.029 60.000 3.29 0.00 0.00 3.71
602 677 1.450312 CACATGTTCCTCGCCCCTC 60.450 63.158 0.00 0.00 0.00 4.30
859 938 2.094182 CGAAGAGAACGGGAATCAAGGA 60.094 50.000 0.00 0.00 0.00 3.36
893 972 2.162681 CCCAACTGCTCGGAAGAAAAT 58.837 47.619 0.00 0.00 41.32 1.82
924 1003 1.216710 GAAGGCGAGACTCCCACTG 59.783 63.158 11.25 0.00 0.00 3.66
1344 1429 2.360980 CCACTCCCCTCTCCGACT 59.639 66.667 0.00 0.00 0.00 4.18
1371 1467 0.904649 CCCAATCAGCCTTTTTCCCC 59.095 55.000 0.00 0.00 0.00 4.81
1372 1468 1.553184 CCCAATCAGCCTTTTTCCCCT 60.553 52.381 0.00 0.00 0.00 4.79
1463 1559 3.193263 GCTGATACATATGGCCTGATCG 58.807 50.000 3.32 0.00 0.00 3.69
1480 1576 2.987413 TCGTTTGGTATTGCTGCTTG 57.013 45.000 0.00 0.00 0.00 4.01
1689 1792 3.118075 TCAATTGACTGTTGTGAGGGTGA 60.118 43.478 3.38 0.00 0.00 4.02
1696 1799 3.632145 ACTGTTGTGAGGGTGATTTTGTC 59.368 43.478 0.00 0.00 0.00 3.18
1781 1885 2.737252 GTCGTTCATGGAGAAGTTCACC 59.263 50.000 12.05 12.05 36.78 4.02
1853 1957 3.322466 AGCCAGGGTCCAGGAACG 61.322 66.667 0.00 0.00 0.00 3.95
2079 2189 9.797556 GTGATACCTGAAAATTGTTAATTACCC 57.202 33.333 0.00 0.00 0.00 3.69
2136 2247 7.158697 GGGTTATTGCTTCACCTTACAATTTT 58.841 34.615 0.00 0.00 34.69 1.82
2143 2254 9.474920 TTGCTTCACCTTACAATTTTCAAATAG 57.525 29.630 0.00 0.00 0.00 1.73
2153 2264 3.980646 TTTTCAAATAGCGCACACTGT 57.019 38.095 11.47 0.00 0.00 3.55
2186 2298 2.300437 GTCTACAGGGCTGGTATGATCC 59.700 54.545 0.00 0.00 34.19 3.36
2192 2304 2.307098 AGGGCTGGTATGATCCTAATGC 59.693 50.000 0.00 0.00 0.00 3.56
2193 2305 2.350522 GGCTGGTATGATCCTAATGCG 58.649 52.381 0.00 0.00 0.00 4.73
2199 2311 3.612860 GGTATGATCCTAATGCGCTAACG 59.387 47.826 9.73 0.00 44.07 3.18
2227 2339 7.844779 AGACACCCTTTCATCTACTATCCTTAA 59.155 37.037 0.00 0.00 0.00 1.85
2228 2340 8.388656 ACACCCTTTCATCTACTATCCTTAAA 57.611 34.615 0.00 0.00 0.00 1.52
2257 2779 8.986991 ACTAAGACCATCTATTGATCTCTGTTT 58.013 33.333 0.00 0.00 0.00 2.83
2308 2870 8.200024 TCTGGAATTGAATTTATTGGGTTCAA 57.800 30.769 2.71 2.71 43.51 2.69
2325 2887 6.494491 TGGGTTCAAATTTCATCAATCTCAGT 59.506 34.615 0.00 0.00 0.00 3.41
2326 2888 6.810182 GGGTTCAAATTTCATCAATCTCAGTG 59.190 38.462 0.00 0.00 0.00 3.66
2327 2889 7.309377 GGGTTCAAATTTCATCAATCTCAGTGA 60.309 37.037 0.00 0.00 0.00 3.41
2328 2890 7.540055 GGTTCAAATTTCATCAATCTCAGTGAC 59.460 37.037 0.00 0.00 0.00 3.67
2329 2891 7.991084 TCAAATTTCATCAATCTCAGTGACT 57.009 32.000 0.00 0.00 0.00 3.41
2330 2892 8.037382 TCAAATTTCATCAATCTCAGTGACTC 57.963 34.615 0.00 0.00 0.00 3.36
2331 2893 7.662669 TCAAATTTCATCAATCTCAGTGACTCA 59.337 33.333 0.00 0.00 0.00 3.41
2332 2894 7.991084 AATTTCATCAATCTCAGTGACTCAA 57.009 32.000 0.00 0.00 0.00 3.02
2333 2895 7.991084 ATTTCATCAATCTCAGTGACTCAAA 57.009 32.000 0.00 0.00 0.00 2.69
2334 2896 6.791887 TTCATCAATCTCAGTGACTCAAAC 57.208 37.500 0.00 0.00 0.00 2.93
2335 2897 6.106648 TCATCAATCTCAGTGACTCAAACT 57.893 37.500 0.00 0.00 0.00 2.66
2336 2898 6.528321 TCATCAATCTCAGTGACTCAAACTT 58.472 36.000 0.00 0.00 0.00 2.66
2337 2899 7.670364 TCATCAATCTCAGTGACTCAAACTTA 58.330 34.615 0.00 0.00 0.00 2.24
2338 2900 7.600375 TCATCAATCTCAGTGACTCAAACTTAC 59.400 37.037 0.00 0.00 0.00 2.34
2339 2901 6.816136 TCAATCTCAGTGACTCAAACTTACA 58.184 36.000 0.00 0.00 0.00 2.41
2340 2902 7.445121 TCAATCTCAGTGACTCAAACTTACAT 58.555 34.615 0.00 0.00 0.00 2.29
2341 2903 7.933577 TCAATCTCAGTGACTCAAACTTACATT 59.066 33.333 0.00 0.00 0.00 2.71
2342 2904 9.208022 CAATCTCAGTGACTCAAACTTACATTA 57.792 33.333 0.00 0.00 0.00 1.90
2343 2905 9.950496 AATCTCAGTGACTCAAACTTACATTAT 57.050 29.630 0.00 0.00 0.00 1.28
2344 2906 8.988064 TCTCAGTGACTCAAACTTACATTATC 57.012 34.615 0.00 0.00 0.00 1.75
2352 2933 6.595716 ACTCAAACTTACATTATCTGGTGCTC 59.404 38.462 0.00 0.00 0.00 4.26
2383 2964 0.249398 AGTATGTCCGCCCTCAACAC 59.751 55.000 0.00 0.00 0.00 3.32
2401 2982 1.340248 CACGGAGCCGAGTATACCATT 59.660 52.381 16.83 0.00 42.83 3.16
2452 3033 2.269978 TGGTACACCTCAGGTACGC 58.730 57.895 0.00 0.00 41.53 4.42
2473 3054 4.858692 CGCGATGAAATTGAATTCCACTTT 59.141 37.500 0.00 0.08 31.40 2.66
2524 3105 2.233271 TGCCTTCTGCTTTTCTTCCAG 58.767 47.619 0.00 0.00 42.00 3.86
2526 3107 2.227626 GCCTTCTGCTTTTCTTCCAGAC 59.772 50.000 0.00 0.00 35.52 3.51
2536 3119 5.470098 GCTTTTCTTCCAGACAACTCATGTA 59.530 40.000 0.00 0.00 44.12 2.29
2577 3160 7.278868 TGTTTACAAACATTTTAGCAAAGGTGG 59.721 33.333 3.44 0.00 43.45 4.61
2595 3178 3.267900 GCATATTGCAGCCTGCTTG 57.732 52.632 18.96 11.04 45.31 4.01
2613 3251 5.971763 TGCTTGTGTGATTACAAACCTTTT 58.028 33.333 0.00 0.00 39.81 2.27
2659 3297 9.573133 CAACATATTCAGATGTTTCTTAAACCC 57.427 33.333 0.00 0.00 45.65 4.11
2751 3397 4.184079 ACGGAAGTGGTATGTTACTGTC 57.816 45.455 0.00 0.00 46.97 3.51
2752 3398 3.575256 ACGGAAGTGGTATGTTACTGTCA 59.425 43.478 0.00 0.00 46.97 3.58
2787 3433 8.927675 AGTTACAAATGGTAATTGGTGTAAGA 57.072 30.769 0.00 0.00 43.50 2.10
2791 3437 6.493458 ACAAATGGTAATTGGTGTAAGAAGCT 59.507 34.615 0.00 0.00 28.12 3.74
2793 3439 8.519526 CAAATGGTAATTGGTGTAAGAAGCTTA 58.480 33.333 0.00 0.00 0.00 3.09
2838 3485 5.850557 TCTATGGTGCATTTATTTGGGTG 57.149 39.130 0.00 0.00 0.00 4.61
2847 3494 1.158904 TTATTTGGGTGGTGTGGGGA 58.841 50.000 0.00 0.00 0.00 4.81
2857 3504 3.003173 TGTGGGGAAGGAGAGGCG 61.003 66.667 0.00 0.00 0.00 5.52
2860 3507 4.168291 GGGGAAGGAGAGGCGCAG 62.168 72.222 10.83 0.00 0.00 5.18
2870 3517 0.179089 AGAGGCGCAGAAGCATGTAG 60.179 55.000 10.83 0.00 42.27 2.74
2901 3917 5.072600 TGGGTTACCACTCAATGTAAAGTCT 59.927 40.000 2.98 0.00 43.37 3.24
2942 3958 5.416947 ACTATTCATAGTTCGGGAACACAC 58.583 41.667 13.52 0.00 40.54 3.82
2946 3962 1.321474 TAGTTCGGGAACACACGTCT 58.679 50.000 13.52 0.00 43.47 4.18
3010 4026 7.306983 GCAAGAAATGTGCTGGCATTAAATATC 60.307 37.037 0.00 0.00 38.03 1.63
3011 4027 7.592885 AGAAATGTGCTGGCATTAAATATCT 57.407 32.000 0.00 0.00 38.03 1.98
3012 4028 7.655490 AGAAATGTGCTGGCATTAAATATCTC 58.345 34.615 0.00 0.00 38.03 2.75
3013 4029 7.504911 AGAAATGTGCTGGCATTAAATATCTCT 59.495 33.333 0.00 0.00 38.03 3.10
3015 4031 7.678947 ATGTGCTGGCATTAAATATCTCTAC 57.321 36.000 0.00 0.00 0.00 2.59
3016 4032 6.830912 TGTGCTGGCATTAAATATCTCTACT 58.169 36.000 0.00 0.00 0.00 2.57
3017 4033 7.962441 TGTGCTGGCATTAAATATCTCTACTA 58.038 34.615 0.00 0.00 0.00 1.82
3019 4035 9.442047 GTGCTGGCATTAAATATCTCTACTATT 57.558 33.333 0.00 0.00 0.00 1.73
3046 4062 3.767673 GGGGGTTTATTGGTTTCTCTTCC 59.232 47.826 0.00 0.00 0.00 3.46
3047 4063 4.412843 GGGGTTTATTGGTTTCTCTTCCA 58.587 43.478 0.00 0.00 0.00 3.53
3048 4064 5.023452 GGGGTTTATTGGTTTCTCTTCCAT 58.977 41.667 0.00 0.00 33.50 3.41
3049 4065 5.127194 GGGGTTTATTGGTTTCTCTTCCATC 59.873 44.000 0.00 0.00 33.50 3.51
3050 4066 5.714806 GGGTTTATTGGTTTCTCTTCCATCA 59.285 40.000 0.00 0.00 33.50 3.07
3051 4067 6.350194 GGGTTTATTGGTTTCTCTTCCATCAC 60.350 42.308 0.00 0.00 33.50 3.06
3052 4068 6.434340 GGTTTATTGGTTTCTCTTCCATCACT 59.566 38.462 0.00 0.00 33.50 3.41
3053 4069 7.039714 GGTTTATTGGTTTCTCTTCCATCACTT 60.040 37.037 0.00 0.00 33.50 3.16
3054 4070 7.687941 TTATTGGTTTCTCTTCCATCACTTC 57.312 36.000 0.00 0.00 33.50 3.01
3055 4071 4.021102 TGGTTTCTCTTCCATCACTTCC 57.979 45.455 0.00 0.00 0.00 3.46
3056 4072 3.394274 TGGTTTCTCTTCCATCACTTCCA 59.606 43.478 0.00 0.00 0.00 3.53
3057 4073 3.753797 GGTTTCTCTTCCATCACTTCCAC 59.246 47.826 0.00 0.00 0.00 4.02
3058 4074 3.703001 TTCTCTTCCATCACTTCCACC 57.297 47.619 0.00 0.00 0.00 4.61
3059 4075 1.909302 TCTCTTCCATCACTTCCACCC 59.091 52.381 0.00 0.00 0.00 4.61
3060 4076 0.991920 TCTTCCATCACTTCCACCCC 59.008 55.000 0.00 0.00 0.00 4.95
3061 4077 0.995024 CTTCCATCACTTCCACCCCT 59.005 55.000 0.00 0.00 0.00 4.79
3062 4078 0.991920 TTCCATCACTTCCACCCCTC 59.008 55.000 0.00 0.00 0.00 4.30
3063 4079 0.914417 TCCATCACTTCCACCCCTCC 60.914 60.000 0.00 0.00 0.00 4.30
3064 4080 1.609783 CATCACTTCCACCCCTCCC 59.390 63.158 0.00 0.00 0.00 4.30
3065 4081 1.163309 ATCACTTCCACCCCTCCCA 59.837 57.895 0.00 0.00 0.00 4.37
3066 4082 1.208165 ATCACTTCCACCCCTCCCAC 61.208 60.000 0.00 0.00 0.00 4.61
3067 4083 2.531942 ACTTCCACCCCTCCCACC 60.532 66.667 0.00 0.00 0.00 4.61
3068 4084 2.531685 CTTCCACCCCTCCCACCA 60.532 66.667 0.00 0.00 0.00 4.17
3069 4085 2.038221 TTCCACCCCTCCCACCAA 60.038 61.111 0.00 0.00 0.00 3.67
3070 4086 1.467190 TTCCACCCCTCCCACCAAT 60.467 57.895 0.00 0.00 0.00 3.16
3071 4087 1.077298 TTCCACCCCTCCCACCAATT 61.077 55.000 0.00 0.00 0.00 2.32
3072 4088 1.077298 TCCACCCCTCCCACCAATTT 61.077 55.000 0.00 0.00 0.00 1.82
3073 4089 0.178906 CCACCCCTCCCACCAATTTT 60.179 55.000 0.00 0.00 0.00 1.82
3074 4090 1.728323 CACCCCTCCCACCAATTTTT 58.272 50.000 0.00 0.00 0.00 1.94
3095 4111 2.702592 TTCCAACCCACACGATATCC 57.297 50.000 0.00 0.00 0.00 2.59
3096 4112 1.574263 TCCAACCCACACGATATCCA 58.426 50.000 0.00 0.00 0.00 3.41
3097 4113 1.909986 TCCAACCCACACGATATCCAA 59.090 47.619 0.00 0.00 0.00 3.53
3098 4114 2.306219 TCCAACCCACACGATATCCAAA 59.694 45.455 0.00 0.00 0.00 3.28
3099 4115 2.422127 CCAACCCACACGATATCCAAAC 59.578 50.000 0.00 0.00 0.00 2.93
3100 4116 3.343617 CAACCCACACGATATCCAAACT 58.656 45.455 0.00 0.00 0.00 2.66
3101 4117 2.985896 ACCCACACGATATCCAAACTG 58.014 47.619 0.00 0.00 0.00 3.16
3102 4118 2.569853 ACCCACACGATATCCAAACTGA 59.430 45.455 0.00 0.00 0.00 3.41
3103 4119 2.936498 CCCACACGATATCCAAACTGAC 59.064 50.000 0.00 0.00 0.00 3.51
3104 4120 2.936498 CCACACGATATCCAAACTGACC 59.064 50.000 0.00 0.00 0.00 4.02
3105 4121 2.936498 CACACGATATCCAAACTGACCC 59.064 50.000 0.00 0.00 0.00 4.46
3106 4122 2.093128 ACACGATATCCAAACTGACCCC 60.093 50.000 0.00 0.00 0.00 4.95
3107 4123 1.489230 ACGATATCCAAACTGACCCCC 59.511 52.381 0.00 0.00 0.00 5.40
3121 4137 3.167414 CCCCCACCTCCTCGTTTT 58.833 61.111 0.00 0.00 0.00 2.43
3122 4138 1.303317 CCCCCACCTCCTCGTTTTG 60.303 63.158 0.00 0.00 0.00 2.44
3123 4139 1.303317 CCCCACCTCCTCGTTTTGG 60.303 63.158 0.00 0.00 0.00 3.28
3124 4140 1.303317 CCCACCTCCTCGTTTTGGG 60.303 63.158 0.00 0.00 41.12 4.12
3125 4141 1.303317 CCACCTCCTCGTTTTGGGG 60.303 63.158 0.00 0.00 0.00 4.96
3129 4145 3.737702 CTCCTCGTTTTGGGGGAAA 57.262 52.632 0.00 0.00 0.00 3.13
3130 4146 1.989706 CTCCTCGTTTTGGGGGAAAA 58.010 50.000 0.00 0.00 0.00 2.29
3131 4147 2.312390 CTCCTCGTTTTGGGGGAAAAA 58.688 47.619 0.00 0.00 35.27 1.94
3132 4148 2.897326 CTCCTCGTTTTGGGGGAAAAAT 59.103 45.455 0.00 0.00 35.27 1.82
3133 4149 2.894765 TCCTCGTTTTGGGGGAAAAATC 59.105 45.455 0.00 0.00 35.27 2.17
3134 4150 2.028476 CCTCGTTTTGGGGGAAAAATCC 60.028 50.000 0.00 0.00 35.27 3.01
3144 4160 2.426522 GGGAAAAATCCCTTGCAAAGC 58.573 47.619 6.65 0.00 44.44 3.51
3145 4161 2.224499 GGGAAAAATCCCTTGCAAAGCA 60.224 45.455 6.65 0.00 44.44 3.91
3146 4162 3.475575 GGAAAAATCCCTTGCAAAGCAA 58.524 40.909 0.00 4.22 46.80 3.91
3158 4174 5.910637 TTGCAAAGCAATCAACAGAAATC 57.089 34.783 0.00 0.00 43.99 2.17
3159 4175 4.946445 TGCAAAGCAATCAACAGAAATCA 58.054 34.783 0.00 0.00 34.76 2.57
3160 4176 5.358090 TGCAAAGCAATCAACAGAAATCAA 58.642 33.333 0.00 0.00 34.76 2.57
3161 4177 5.816258 TGCAAAGCAATCAACAGAAATCAAA 59.184 32.000 0.00 0.00 34.76 2.69
3162 4178 6.483974 TGCAAAGCAATCAACAGAAATCAAAT 59.516 30.769 0.00 0.00 34.76 2.32
3163 4179 7.012515 TGCAAAGCAATCAACAGAAATCAAATT 59.987 29.630 0.00 0.00 34.76 1.82
3164 4180 8.497554 GCAAAGCAATCAACAGAAATCAAATTA 58.502 29.630 0.00 0.00 0.00 1.40
3168 4184 9.079833 AGCAATCAACAGAAATCAAATTAATCG 57.920 29.630 0.00 0.00 0.00 3.34
3169 4185 7.842721 GCAATCAACAGAAATCAAATTAATCGC 59.157 33.333 0.00 0.00 0.00 4.58
3170 4186 7.992180 ATCAACAGAAATCAAATTAATCGCC 57.008 32.000 0.00 0.00 0.00 5.54
3171 4187 6.918626 TCAACAGAAATCAAATTAATCGCCA 58.081 32.000 0.00 0.00 0.00 5.69
3172 4188 7.374272 TCAACAGAAATCAAATTAATCGCCAA 58.626 30.769 0.00 0.00 0.00 4.52
3173 4189 8.034215 TCAACAGAAATCAAATTAATCGCCAAT 58.966 29.630 0.00 0.00 0.00 3.16
3174 4190 9.299963 CAACAGAAATCAAATTAATCGCCAATA 57.700 29.630 0.00 0.00 0.00 1.90
3175 4191 9.520204 AACAGAAATCAAATTAATCGCCAATAG 57.480 29.630 0.00 0.00 0.00 1.73
3176 4192 7.649306 ACAGAAATCAAATTAATCGCCAATAGC 59.351 33.333 0.00 0.00 38.52 2.97
3177 4193 7.648908 CAGAAATCAAATTAATCGCCAATAGCA 59.351 33.333 0.00 0.00 44.04 3.49
3178 4194 8.196771 AGAAATCAAATTAATCGCCAATAGCAA 58.803 29.630 0.00 0.00 44.04 3.91
3179 4195 7.935338 AATCAAATTAATCGCCAATAGCAAG 57.065 32.000 0.00 0.00 44.04 4.01
3180 4196 6.691754 TCAAATTAATCGCCAATAGCAAGA 57.308 33.333 0.00 0.00 44.04 3.02
3181 4197 7.094508 TCAAATTAATCGCCAATAGCAAGAA 57.905 32.000 0.00 0.00 44.04 2.52
3182 4198 7.542890 TCAAATTAATCGCCAATAGCAAGAAA 58.457 30.769 0.00 0.00 44.04 2.52
3183 4199 8.196771 TCAAATTAATCGCCAATAGCAAGAAAT 58.803 29.630 0.00 0.00 44.04 2.17
3184 4200 8.482429 CAAATTAATCGCCAATAGCAAGAAATC 58.518 33.333 0.00 0.00 44.04 2.17
3185 4201 4.574599 AATCGCCAATAGCAAGAAATCC 57.425 40.909 0.00 0.00 44.04 3.01
3186 4202 2.297701 TCGCCAATAGCAAGAAATCCC 58.702 47.619 0.00 0.00 44.04 3.85
3187 4203 2.092429 TCGCCAATAGCAAGAAATCCCT 60.092 45.455 0.00 0.00 44.04 4.20
3188 4204 2.689983 CGCCAATAGCAAGAAATCCCTT 59.310 45.455 0.00 0.00 44.04 3.95
3189 4205 3.489738 CGCCAATAGCAAGAAATCCCTTG 60.490 47.826 0.00 0.00 44.67 3.61
3199 4215 5.841810 CAAGAAATCCCTTGCAAGTAAACA 58.158 37.500 24.35 4.30 37.35 2.83
3200 4216 6.279882 CAAGAAATCCCTTGCAAGTAAACAA 58.720 36.000 24.35 4.20 37.35 2.83
3201 4217 5.842907 AGAAATCCCTTGCAAGTAAACAAC 58.157 37.500 24.35 10.32 0.00 3.32
3202 4218 5.362430 AGAAATCCCTTGCAAGTAAACAACA 59.638 36.000 24.35 0.19 0.00 3.33
3203 4219 5.606348 AATCCCTTGCAAGTAAACAACAA 57.394 34.783 24.35 0.37 0.00 2.83
3204 4220 5.606348 ATCCCTTGCAAGTAAACAACAAA 57.394 34.783 24.35 0.00 0.00 2.83
3205 4221 5.407407 TCCCTTGCAAGTAAACAACAAAA 57.593 34.783 24.35 0.00 0.00 2.44
3206 4222 5.983540 TCCCTTGCAAGTAAACAACAAAAT 58.016 33.333 24.35 0.00 0.00 1.82
3207 4223 6.045955 TCCCTTGCAAGTAAACAACAAAATC 58.954 36.000 24.35 0.00 0.00 2.17
3208 4224 5.814705 CCCTTGCAAGTAAACAACAAAATCA 59.185 36.000 24.35 0.00 0.00 2.57
3209 4225 6.314896 CCCTTGCAAGTAAACAACAAAATCAA 59.685 34.615 24.35 0.00 0.00 2.57
3210 4226 7.148340 CCCTTGCAAGTAAACAACAAAATCAAA 60.148 33.333 24.35 0.00 0.00 2.69
3211 4227 8.397148 CCTTGCAAGTAAACAACAAAATCAAAT 58.603 29.630 24.35 0.00 0.00 2.32
3212 4228 9.424659 CTTGCAAGTAAACAACAAAATCAAATC 57.575 29.630 18.65 0.00 0.00 2.17
3213 4229 8.484641 TGCAAGTAAACAACAAAATCAAATCA 57.515 26.923 0.00 0.00 0.00 2.57
3214 4230 8.386606 TGCAAGTAAACAACAAAATCAAATCAC 58.613 29.630 0.00 0.00 0.00 3.06
3215 4231 7.578736 GCAAGTAAACAACAAAATCAAATCACG 59.421 33.333 0.00 0.00 0.00 4.35
3216 4232 8.591312 CAAGTAAACAACAAAATCAAATCACGT 58.409 29.630 0.00 0.00 0.00 4.49
3217 4233 9.790389 AAGTAAACAACAAAATCAAATCACGTA 57.210 25.926 0.00 0.00 0.00 3.57
3218 4234 9.445786 AGTAAACAACAAAATCAAATCACGTAG 57.554 29.630 0.00 0.00 0.00 3.51
3220 4236 8.696410 AAACAACAAAATCAAATCACGTAGTT 57.304 26.923 0.00 0.00 41.61 2.24
3221 4237 7.678194 ACAACAAAATCAAATCACGTAGTTG 57.322 32.000 0.00 0.00 41.61 3.16
3222 4238 7.254852 ACAACAAAATCAAATCACGTAGTTGT 58.745 30.769 0.00 0.00 41.61 3.32
3223 4239 8.399425 ACAACAAAATCAAATCACGTAGTTGTA 58.601 29.630 0.00 0.00 41.61 2.41
3224 4240 9.227490 CAACAAAATCAAATCACGTAGTTGTAA 57.773 29.630 0.00 0.00 41.61 2.41
3225 4241 9.445786 AACAAAATCAAATCACGTAGTTGTAAG 57.554 29.630 0.00 0.00 41.61 2.34
3226 4242 8.617809 ACAAAATCAAATCACGTAGTTGTAAGT 58.382 29.630 0.00 0.00 41.61 2.24
3229 4245 8.821147 AATCAAATCACGTAGTTGTAAGTACA 57.179 30.769 9.54 0.00 41.61 2.90
3230 4246 7.627585 TCAAATCACGTAGTTGTAAGTACAC 57.372 36.000 9.54 0.00 41.61 2.90
3231 4247 7.201835 TCAAATCACGTAGTTGTAAGTACACA 58.798 34.615 9.54 0.00 41.61 3.72
3232 4248 7.705752 TCAAATCACGTAGTTGTAAGTACACAA 59.294 33.333 9.54 0.00 41.61 3.33
3233 4249 8.492748 CAAATCACGTAGTTGTAAGTACACAAT 58.507 33.333 9.54 0.00 41.61 2.71
3234 4250 7.807687 ATCACGTAGTTGTAAGTACACAATC 57.192 36.000 9.54 0.00 41.61 2.67
3235 4251 6.973843 TCACGTAGTTGTAAGTACACAATCT 58.026 36.000 9.54 4.89 41.61 2.40
3236 4252 7.080099 TCACGTAGTTGTAAGTACACAATCTC 58.920 38.462 9.54 0.00 41.61 2.75
3237 4253 6.859508 CACGTAGTTGTAAGTACACAATCTCA 59.140 38.462 9.54 0.00 41.61 3.27
3238 4254 7.380333 CACGTAGTTGTAAGTACACAATCTCAA 59.620 37.037 9.54 0.00 41.61 3.02
3239 4255 8.086522 ACGTAGTTGTAAGTACACAATCTCAAT 58.913 33.333 9.54 0.00 37.78 2.57
3240 4256 8.584600 CGTAGTTGTAAGTACACAATCTCAATC 58.415 37.037 9.54 0.00 40.36 2.67
3241 4257 9.419297 GTAGTTGTAAGTACACAATCTCAATCA 57.581 33.333 2.46 0.00 40.36 2.57
3242 4258 8.311650 AGTTGTAAGTACACAATCTCAATCAC 57.688 34.615 2.46 0.00 40.36 3.06
3243 4259 7.931407 AGTTGTAAGTACACAATCTCAATCACA 59.069 33.333 2.46 0.00 40.36 3.58
3244 4260 8.721478 GTTGTAAGTACACAATCTCAATCACAT 58.279 33.333 2.46 0.00 40.36 3.21
3245 4261 8.479313 TGTAAGTACACAATCTCAATCACATC 57.521 34.615 0.00 0.00 0.00 3.06
3246 4262 8.093927 TGTAAGTACACAATCTCAATCACATCA 58.906 33.333 0.00 0.00 0.00 3.07
3247 4263 9.102757 GTAAGTACACAATCTCAATCACATCAT 57.897 33.333 0.00 0.00 0.00 2.45
3249 4265 9.842775 AAGTACACAATCTCAATCACATCATAT 57.157 29.630 0.00 0.00 0.00 1.78
3250 4266 9.486497 AGTACACAATCTCAATCACATCATATC 57.514 33.333 0.00 0.00 0.00 1.63
3251 4267 9.486497 GTACACAATCTCAATCACATCATATCT 57.514 33.333 0.00 0.00 0.00 1.98
3252 4268 8.975663 ACACAATCTCAATCACATCATATCTT 57.024 30.769 0.00 0.00 0.00 2.40
3253 4269 9.404848 ACACAATCTCAATCACATCATATCTTT 57.595 29.630 0.00 0.00 0.00 2.52
3254 4270 9.880064 CACAATCTCAATCACATCATATCTTTC 57.120 33.333 0.00 0.00 0.00 2.62
3255 4271 9.064706 ACAATCTCAATCACATCATATCTTTCC 57.935 33.333 0.00 0.00 0.00 3.13
3256 4272 7.902387 ATCTCAATCACATCATATCTTTCCG 57.098 36.000 0.00 0.00 0.00 4.30
3257 4273 6.820335 TCTCAATCACATCATATCTTTCCGT 58.180 36.000 0.00 0.00 0.00 4.69
3258 4274 7.951591 TCTCAATCACATCATATCTTTCCGTA 58.048 34.615 0.00 0.00 0.00 4.02
3259 4275 8.421002 TCTCAATCACATCATATCTTTCCGTAA 58.579 33.333 0.00 0.00 0.00 3.18
3260 4276 8.365399 TCAATCACATCATATCTTTCCGTAAC 57.635 34.615 0.00 0.00 0.00 2.50
3261 4277 8.204160 TCAATCACATCATATCTTTCCGTAACT 58.796 33.333 0.00 0.00 0.00 2.24
3262 4278 8.830580 CAATCACATCATATCTTTCCGTAACTT 58.169 33.333 0.00 0.00 0.00 2.66
3263 4279 8.964476 ATCACATCATATCTTTCCGTAACTTT 57.036 30.769 0.00 0.00 0.00 2.66
3264 4280 8.196802 TCACATCATATCTTTCCGTAACTTTG 57.803 34.615 0.00 0.00 0.00 2.77
3265 4281 6.907212 CACATCATATCTTTCCGTAACTTTGC 59.093 38.462 0.00 0.00 0.00 3.68
3266 4282 6.038271 ACATCATATCTTTCCGTAACTTTGCC 59.962 38.462 0.00 0.00 0.00 4.52
3267 4283 5.741011 TCATATCTTTCCGTAACTTTGCCT 58.259 37.500 0.00 0.00 0.00 4.75
3268 4284 6.880484 TCATATCTTTCCGTAACTTTGCCTA 58.120 36.000 0.00 0.00 0.00 3.93
3269 4285 7.506114 TCATATCTTTCCGTAACTTTGCCTAT 58.494 34.615 0.00 0.00 0.00 2.57
3270 4286 7.441157 TCATATCTTTCCGTAACTTTGCCTATG 59.559 37.037 0.00 0.00 0.00 2.23
3271 4287 4.258543 TCTTTCCGTAACTTTGCCTATGG 58.741 43.478 0.00 0.00 0.00 2.74
3272 4288 3.985019 TTCCGTAACTTTGCCTATGGA 57.015 42.857 0.00 0.00 32.46 3.41
3273 4289 4.497291 TTCCGTAACTTTGCCTATGGAT 57.503 40.909 0.00 0.00 34.03 3.41
3274 4290 4.497291 TCCGTAACTTTGCCTATGGATT 57.503 40.909 0.00 0.00 29.87 3.01
3275 4291 4.448210 TCCGTAACTTTGCCTATGGATTC 58.552 43.478 0.00 0.00 29.87 2.52
3276 4292 3.564225 CCGTAACTTTGCCTATGGATTCC 59.436 47.826 0.00 0.00 0.00 3.01
3277 4293 3.564225 CGTAACTTTGCCTATGGATTCCC 59.436 47.826 0.00 0.00 0.00 3.97
3278 4294 4.686122 CGTAACTTTGCCTATGGATTCCCT 60.686 45.833 0.00 0.00 0.00 4.20
3279 4295 3.584733 ACTTTGCCTATGGATTCCCTC 57.415 47.619 0.00 0.00 0.00 4.30
3280 4296 2.175715 ACTTTGCCTATGGATTCCCTCC 59.824 50.000 0.00 0.00 45.19 4.30
3281 4297 1.149101 TTGCCTATGGATTCCCTCCC 58.851 55.000 0.00 0.00 44.23 4.30
3282 4298 0.772124 TGCCTATGGATTCCCTCCCC 60.772 60.000 0.00 0.00 44.23 4.81
3283 4299 1.842381 GCCTATGGATTCCCTCCCCG 61.842 65.000 0.00 0.00 44.23 5.73
3284 4300 1.679898 CTATGGATTCCCTCCCCGC 59.320 63.158 0.00 0.00 44.23 6.13
3285 4301 1.074090 TATGGATTCCCTCCCCGCA 60.074 57.895 0.00 0.00 44.23 5.69
3286 4302 1.127567 TATGGATTCCCTCCCCGCAG 61.128 60.000 0.00 0.00 44.23 5.18
3287 4303 4.570874 GGATTCCCTCCCCGCAGC 62.571 72.222 0.00 0.00 38.19 5.25
3288 4304 3.797353 GATTCCCTCCCCGCAGCA 61.797 66.667 0.00 0.00 0.00 4.41
3289 4305 3.099170 ATTCCCTCCCCGCAGCAT 61.099 61.111 0.00 0.00 0.00 3.79
3290 4306 1.768684 GATTCCCTCCCCGCAGCATA 61.769 60.000 0.00 0.00 0.00 3.14
3291 4307 1.136329 ATTCCCTCCCCGCAGCATAT 61.136 55.000 0.00 0.00 0.00 1.78
3292 4308 1.768684 TTCCCTCCCCGCAGCATATC 61.769 60.000 0.00 0.00 0.00 1.63
3293 4309 2.219875 CCCTCCCCGCAGCATATCT 61.220 63.158 0.00 0.00 0.00 1.98
3294 4310 1.294780 CCTCCCCGCAGCATATCTC 59.705 63.158 0.00 0.00 0.00 2.75
3295 4311 1.475169 CCTCCCCGCAGCATATCTCA 61.475 60.000 0.00 0.00 0.00 3.27
3296 4312 0.394192 CTCCCCGCAGCATATCTCAA 59.606 55.000 0.00 0.00 0.00 3.02
3297 4313 1.002888 CTCCCCGCAGCATATCTCAAT 59.997 52.381 0.00 0.00 0.00 2.57
3298 4314 1.002430 TCCCCGCAGCATATCTCAATC 59.998 52.381 0.00 0.00 0.00 2.67
3299 4315 1.002888 CCCCGCAGCATATCTCAATCT 59.997 52.381 0.00 0.00 0.00 2.40
3300 4316 2.344950 CCCGCAGCATATCTCAATCTC 58.655 52.381 0.00 0.00 0.00 2.75
3301 4317 2.289257 CCCGCAGCATATCTCAATCTCA 60.289 50.000 0.00 0.00 0.00 3.27
3302 4318 3.597255 CCGCAGCATATCTCAATCTCAT 58.403 45.455 0.00 0.00 0.00 2.90
3303 4319 3.617706 CCGCAGCATATCTCAATCTCATC 59.382 47.826 0.00 0.00 0.00 2.92
3304 4320 3.617706 CGCAGCATATCTCAATCTCATCC 59.382 47.826 0.00 0.00 0.00 3.51
3305 4321 3.940221 GCAGCATATCTCAATCTCATCCC 59.060 47.826 0.00 0.00 0.00 3.85
3306 4322 4.565028 GCAGCATATCTCAATCTCATCCCA 60.565 45.833 0.00 0.00 0.00 4.37
3307 4323 5.557866 CAGCATATCTCAATCTCATCCCAA 58.442 41.667 0.00 0.00 0.00 4.12
3308 4324 6.181190 CAGCATATCTCAATCTCATCCCAAT 58.819 40.000 0.00 0.00 0.00 3.16
3309 4325 6.316640 CAGCATATCTCAATCTCATCCCAATC 59.683 42.308 0.00 0.00 0.00 2.67
3310 4326 6.012771 AGCATATCTCAATCTCATCCCAATCA 60.013 38.462 0.00 0.00 0.00 2.57
3311 4327 6.657966 GCATATCTCAATCTCATCCCAATCAA 59.342 38.462 0.00 0.00 0.00 2.57
3312 4328 7.176165 GCATATCTCAATCTCATCCCAATCAAA 59.824 37.037 0.00 0.00 0.00 2.69
3313 4329 9.074576 CATATCTCAATCTCATCCCAATCAAAA 57.925 33.333 0.00 0.00 0.00 2.44
3314 4330 7.966339 ATCTCAATCTCATCCCAATCAAAAA 57.034 32.000 0.00 0.00 0.00 1.94
3336 4352 7.681939 AAAAATTCTACGCTGAACCAATAGA 57.318 32.000 0.00 0.00 0.00 1.98
3337 4353 7.681939 AAAATTCTACGCTGAACCAATAGAA 57.318 32.000 0.00 0.00 36.56 2.10
3338 4354 7.865706 AAATTCTACGCTGAACCAATAGAAT 57.134 32.000 0.00 0.00 41.93 2.40
3339 4355 8.958119 AAATTCTACGCTGAACCAATAGAATA 57.042 30.769 5.49 0.00 40.19 1.75
3340 4356 8.958119 AATTCTACGCTGAACCAATAGAATAA 57.042 30.769 5.49 0.00 40.19 1.40
3341 4357 8.958119 ATTCTACGCTGAACCAATAGAATAAA 57.042 30.769 3.57 0.00 39.61 1.40
3342 4358 8.420374 TTCTACGCTGAACCAATAGAATAAAG 57.580 34.615 0.00 0.00 29.16 1.85
3343 4359 7.553334 TCTACGCTGAACCAATAGAATAAAGT 58.447 34.615 0.00 0.00 0.00 2.66
3344 4360 8.038944 TCTACGCTGAACCAATAGAATAAAGTT 58.961 33.333 0.00 0.00 0.00 2.66
3345 4361 6.842163 ACGCTGAACCAATAGAATAAAGTTG 58.158 36.000 0.00 0.00 0.00 3.16
3346 4362 5.739161 CGCTGAACCAATAGAATAAAGTTGC 59.261 40.000 0.00 0.00 0.00 4.17
3347 4363 6.036470 GCTGAACCAATAGAATAAAGTTGCC 58.964 40.000 0.00 0.00 0.00 4.52
3348 4364 6.524101 TGAACCAATAGAATAAAGTTGCCC 57.476 37.500 0.00 0.00 0.00 5.36
3349 4365 6.252995 TGAACCAATAGAATAAAGTTGCCCT 58.747 36.000 0.00 0.00 0.00 5.19
3350 4366 6.152661 TGAACCAATAGAATAAAGTTGCCCTG 59.847 38.462 0.00 0.00 0.00 4.45
3351 4367 5.580022 ACCAATAGAATAAAGTTGCCCTGT 58.420 37.500 0.00 0.00 0.00 4.00
3352 4368 6.016555 ACCAATAGAATAAAGTTGCCCTGTT 58.983 36.000 0.00 0.00 0.00 3.16
3353 4369 6.071391 ACCAATAGAATAAAGTTGCCCTGTTG 60.071 38.462 0.00 0.00 0.00 3.33
3354 4370 3.942130 AGAATAAAGTTGCCCTGTTGC 57.058 42.857 0.00 0.00 0.00 4.17
3355 4371 3.230134 AGAATAAAGTTGCCCTGTTGCA 58.770 40.909 0.00 0.00 40.07 4.08
3360 4376 4.674306 TTGCCCTGTTGCAACTCA 57.326 50.000 28.61 17.80 45.77 3.41
3361 4377 2.114638 TTGCCCTGTTGCAACTCAC 58.885 52.632 28.61 16.19 45.77 3.51
3362 4378 1.723608 TTGCCCTGTTGCAACTCACG 61.724 55.000 28.61 14.87 45.77 4.35
3363 4379 2.908073 GCCCTGTTGCAACTCACGG 61.908 63.158 28.61 21.32 0.00 4.94
3364 4380 2.260869 CCCTGTTGCAACTCACGGG 61.261 63.158 28.61 25.21 0.00 5.28
3365 4381 1.525995 CCTGTTGCAACTCACGGGT 60.526 57.895 28.61 0.00 0.00 5.28
3366 4382 0.250124 CCTGTTGCAACTCACGGGTA 60.250 55.000 28.61 6.48 0.00 3.69
3367 4383 1.610624 CCTGTTGCAACTCACGGGTAT 60.611 52.381 28.61 0.00 0.00 2.73
3368 4384 2.151202 CTGTTGCAACTCACGGGTATT 58.849 47.619 28.61 0.00 0.00 1.89
3369 4385 2.552315 CTGTTGCAACTCACGGGTATTT 59.448 45.455 28.61 0.00 0.00 1.40
3370 4386 3.741249 TGTTGCAACTCACGGGTATTTA 58.259 40.909 28.61 2.21 0.00 1.40
3371 4387 3.749088 TGTTGCAACTCACGGGTATTTAG 59.251 43.478 28.61 0.00 0.00 1.85
3372 4388 2.352388 TGCAACTCACGGGTATTTAGC 58.648 47.619 0.00 0.00 0.00 3.09
3373 4389 2.027561 TGCAACTCACGGGTATTTAGCT 60.028 45.455 0.00 0.00 0.00 3.32
3374 4390 3.196039 TGCAACTCACGGGTATTTAGCTA 59.804 43.478 0.00 0.00 0.00 3.32
3375 4391 3.802685 GCAACTCACGGGTATTTAGCTAG 59.197 47.826 0.00 0.00 0.00 3.42
3376 4392 4.679905 GCAACTCACGGGTATTTAGCTAGT 60.680 45.833 0.00 0.00 0.00 2.57
3377 4393 4.650754 ACTCACGGGTATTTAGCTAGTG 57.349 45.455 0.00 0.00 35.43 2.74
3378 4394 4.275810 ACTCACGGGTATTTAGCTAGTGA 58.724 43.478 8.81 8.81 38.17 3.41
3379 4395 4.861210 CTCACGGGTATTTAGCTAGTGAG 58.139 47.826 17.51 17.51 44.06 3.51
3380 4396 4.529897 TCACGGGTATTTAGCTAGTGAGA 58.470 43.478 5.82 0.00 36.88 3.27
3381 4397 4.951715 TCACGGGTATTTAGCTAGTGAGAA 59.048 41.667 5.82 0.00 36.88 2.87
3382 4398 5.419788 TCACGGGTATTTAGCTAGTGAGAAA 59.580 40.000 5.82 0.00 36.88 2.52
3383 4399 6.071221 TCACGGGTATTTAGCTAGTGAGAAAA 60.071 38.462 5.82 0.00 36.88 2.29
3384 4400 6.761714 CACGGGTATTTAGCTAGTGAGAAAAT 59.238 38.462 1.81 0.00 35.80 1.82
3416 4432 9.959749 TGAGTCAATAACAAGACAATAAAAACC 57.040 29.630 0.00 0.00 37.23 3.27
3447 4475 0.618458 TATGGTGGCCTGACCTGTTC 59.382 55.000 13.17 0.00 40.22 3.18
3466 4494 7.016268 ACCTGTTCTGGAGTTTAATCTGAGTTA 59.984 37.037 2.86 0.00 0.00 2.24
3486 4514 9.936759 TGAGTTAAGTTTGATGTACATGTGATA 57.063 29.630 14.43 0.00 0.00 2.15
3628 4666 4.019174 CAGTTGAGGATACCCTGCAAATT 58.981 43.478 0.00 0.00 44.53 1.82
3772 4810 8.550376 GTCTAGTGGTATTCTTAAGAGTACTCG 58.450 40.741 27.45 13.28 37.40 4.18
3836 4874 5.220970 GGTGCTCAAAAGTTTGCTAGTACAA 60.221 40.000 12.45 0.00 38.05 2.41
3916 4954 4.751431 GCTTCCCCAGCTCATGTT 57.249 55.556 0.00 0.00 46.27 2.71
3957 4995 5.690865 ACTGAAGGTACCTTGATGACAAAA 58.309 37.500 31.81 4.94 36.26 2.44
4074 5116 7.440523 AAACACTTTATAACTTCTGAGCTGG 57.559 36.000 0.00 0.00 0.00 4.85
4470 5514 4.552166 ATGTACAGCATATTTTCCGTGC 57.448 40.909 0.33 0.00 35.74 5.34
4532 5576 3.135712 TGAGAAACTGCAGTAAGTCCCAA 59.864 43.478 22.01 4.18 0.00 4.12
4579 5623 3.262686 GAGAATCCGTTCGCCCGC 61.263 66.667 0.00 0.00 39.38 6.13
4593 5677 1.154543 CCCGCGTTGCTAAAACGTC 60.155 57.895 4.92 4.30 44.69 4.34
4634 5722 3.713288 CAGTCGTCTGTTCTTAACACCA 58.287 45.455 1.16 0.00 36.25 4.17
4660 5748 4.792521 ACCTGTGACTGTAGTTCATCTC 57.207 45.455 0.00 0.00 0.00 2.75
4723 5811 6.564557 AAAAGATCCATACTTACCCGGTAA 57.435 37.500 9.72 9.72 0.00 2.85
4724 5812 6.758806 AAAGATCCATACTTACCCGGTAAT 57.241 37.500 10.53 4.40 0.00 1.89
4733 5821 7.283580 CCATACTTACCCGGTAATTTTCATGAA 59.716 37.037 10.53 3.38 0.00 2.57
4750 5838 3.686227 TGAAATAGCCCCATTGATGGT 57.314 42.857 9.07 0.00 46.65 3.55
4764 5852 0.523072 GATGGTTGTGTGCATCGCTT 59.477 50.000 0.00 0.00 0.00 4.68
4765 5853 0.241749 ATGGTTGTGTGCATCGCTTG 59.758 50.000 0.00 0.00 0.00 4.01
4776 5864 0.814410 CATCGCTTGATGCAGAGGCT 60.814 55.000 0.00 0.00 42.78 4.58
4777 5865 0.814410 ATCGCTTGATGCAGAGGCTG 60.814 55.000 0.00 0.00 43.06 4.85
4781 5869 2.905935 CTTGATGCAGAGGCTGGGGG 62.906 65.000 0.00 0.00 41.91 5.40
4788 5876 2.367512 GAGGCTGGGGGTCATCCT 60.368 66.667 0.00 0.00 44.07 3.24
4798 5886 3.169512 GGGGTCATCCTCCTTTTCAAA 57.830 47.619 0.00 0.00 35.33 2.69
4905 5997 5.816496 CCTAGGGAGGTAGCACTTTTGCC 62.816 56.522 0.00 0.00 43.23 4.52
4974 6214 2.325583 TCCTGAGGTTGTGTTGTGTC 57.674 50.000 0.00 0.00 0.00 3.67
4977 6217 2.632377 CTGAGGTTGTGTTGTGTCTGT 58.368 47.619 0.00 0.00 0.00 3.41
4978 6218 3.431626 CCTGAGGTTGTGTTGTGTCTGTA 60.432 47.826 0.00 0.00 0.00 2.74
4979 6219 3.792401 TGAGGTTGTGTTGTGTCTGTAG 58.208 45.455 0.00 0.00 0.00 2.74
4980 6220 3.196901 TGAGGTTGTGTTGTGTCTGTAGT 59.803 43.478 0.00 0.00 0.00 2.73
4981 6221 3.531538 AGGTTGTGTTGTGTCTGTAGTG 58.468 45.455 0.00 0.00 0.00 2.74
4982 6222 3.055385 AGGTTGTGTTGTGTCTGTAGTGT 60.055 43.478 0.00 0.00 0.00 3.55
4983 6223 3.063452 GGTTGTGTTGTGTCTGTAGTGTG 59.937 47.826 0.00 0.00 0.00 3.82
4984 6224 3.603158 TGTGTTGTGTCTGTAGTGTGT 57.397 42.857 0.00 0.00 0.00 3.72
4985 6225 4.722361 TGTGTTGTGTCTGTAGTGTGTA 57.278 40.909 0.00 0.00 0.00 2.90
4986 6226 4.426416 TGTGTTGTGTCTGTAGTGTGTAC 58.574 43.478 0.00 0.00 0.00 2.90
4987 6227 4.158949 TGTGTTGTGTCTGTAGTGTGTACT 59.841 41.667 0.00 0.00 40.99 2.73
4988 6228 5.357596 TGTGTTGTGTCTGTAGTGTGTACTA 59.642 40.000 0.00 0.00 38.36 1.82
5120 6361 6.821665 AGCCAAGACATTTTCGCTAGTAATAA 59.178 34.615 0.00 0.00 0.00 1.40
5190 6431 8.243961 TCCTTTTAAACATTCCAATGAAGACA 57.756 30.769 6.29 0.00 39.67 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
127 140 1.916777 GAACCTTCCTCCCGGTCCA 60.917 63.158 0.00 0.00 31.87 4.02
131 144 0.912486 AAGATGAACCTTCCTCCCGG 59.088 55.000 0.00 0.00 0.00 5.73
132 145 1.471676 CGAAGATGAACCTTCCTCCCG 60.472 57.143 0.00 0.00 39.39 5.14
195 208 8.327271 TCAATCTTCATCTTCATCTTCCTCTTT 58.673 33.333 0.00 0.00 0.00 2.52
246 262 5.127845 TCCAACCAAGTTCAAATGCAAACTA 59.872 36.000 2.05 0.00 34.71 2.24
512 586 2.437359 GCATCTCCAACAGCCGCT 60.437 61.111 0.00 0.00 0.00 5.52
634 709 1.401539 GCCTGTCGTGCAATTTCTTCC 60.402 52.381 0.00 0.00 0.00 3.46
828 907 1.792006 GTTCTCTTCGCCCTTTTCGA 58.208 50.000 0.00 0.00 0.00 3.71
829 908 0.438830 CGTTCTCTTCGCCCTTTTCG 59.561 55.000 0.00 0.00 0.00 3.46
830 909 0.796927 CCGTTCTCTTCGCCCTTTTC 59.203 55.000 0.00 0.00 0.00 2.29
859 938 2.669133 TTGGGGCTGCTGCGAGTAT 61.669 57.895 9.65 0.00 40.82 2.12
880 959 4.335272 CTTCGCTTTATTTTCTTCCGAGC 58.665 43.478 0.00 0.00 0.00 5.03
893 972 0.796312 CGCCTTCTTGCTTCGCTTTA 59.204 50.000 0.00 0.00 0.00 1.85
1344 1429 4.591321 AAAGGCTGATTGGGAGATTGTA 57.409 40.909 0.00 0.00 0.00 2.41
1371 1467 2.675844 TCGGCGGTTGTTGATTGATTAG 59.324 45.455 7.21 0.00 0.00 1.73
1372 1468 2.675844 CTCGGCGGTTGTTGATTGATTA 59.324 45.455 7.21 0.00 0.00 1.75
1463 1559 3.853671 CGAATCAAGCAGCAATACCAAAC 59.146 43.478 0.00 0.00 0.00 2.93
1480 1576 1.755393 ATCCCGCCCTACACCGAATC 61.755 60.000 0.00 0.00 0.00 2.52
1602 1698 2.635443 CCAATGGGCCAACGTCACC 61.635 63.158 11.89 0.00 0.00 4.02
1689 1792 4.858692 CGCAATTCATCTTTCCGACAAAAT 59.141 37.500 0.00 0.00 0.00 1.82
1696 1799 3.469899 TGAACGCAATTCATCTTTCCG 57.530 42.857 0.00 0.00 42.62 4.30
1781 1885 0.247460 TCACAGGGATCACTTCAGCG 59.753 55.000 0.00 0.00 0.00 5.18
1868 1972 4.179361 TGCTCCACCAAAGCAAGG 57.821 55.556 0.00 0.00 46.29 3.61
2079 2189 9.950680 GATAACTGGTTACATTAAATCACCATG 57.049 33.333 0.00 0.00 36.91 3.66
2095 2205 6.096846 GCAATAACCCATTCAGATAACTGGTT 59.903 38.462 0.00 0.00 43.60 3.67
2097 2207 5.829924 AGCAATAACCCATTCAGATAACTGG 59.170 40.000 0.00 0.00 43.60 4.00
2136 2247 6.315144 ACATAATTACAGTGTGCGCTATTTGA 59.685 34.615 9.73 0.00 0.00 2.69
2143 2254 4.331717 ACCTAACATAATTACAGTGTGCGC 59.668 41.667 5.88 0.00 0.00 6.09
2153 2264 6.042781 CCAGCCCTGTAGACCTAACATAATTA 59.957 42.308 0.00 0.00 0.00 1.40
2186 2298 1.852895 GTGTCTCCGTTAGCGCATTAG 59.147 52.381 11.47 0.00 36.67 1.73
2192 2304 0.037605 AAAGGGTGTCTCCGTTAGCG 60.038 55.000 0.00 0.00 42.57 4.26
2193 2305 1.001633 TGAAAGGGTGTCTCCGTTAGC 59.998 52.381 0.00 0.00 42.57 3.09
2199 2311 5.011227 GGATAGTAGATGAAAGGGTGTCTCC 59.989 48.000 0.00 0.00 0.00 3.71
2278 2824 9.265862 ACCCAATAAATTCAATTCCAGAATACA 57.734 29.630 0.00 0.00 34.78 2.29
2298 2860 7.909518 TGAGATTGATGAAATTTGAACCCAAT 58.090 30.769 0.00 0.00 31.46 3.16
2308 2870 7.991084 TTGAGTCACTGAGATTGATGAAATT 57.009 32.000 0.00 0.00 0.00 1.82
2325 2887 6.371548 GCACCAGATAATGTAAGTTTGAGTCA 59.628 38.462 0.00 0.00 0.00 3.41
2326 2888 6.595716 AGCACCAGATAATGTAAGTTTGAGTC 59.404 38.462 0.00 0.00 0.00 3.36
2327 2889 6.476378 AGCACCAGATAATGTAAGTTTGAGT 58.524 36.000 0.00 0.00 0.00 3.41
2328 2890 6.820656 AGAGCACCAGATAATGTAAGTTTGAG 59.179 38.462 0.00 0.00 0.00 3.02
2329 2891 6.595326 CAGAGCACCAGATAATGTAAGTTTGA 59.405 38.462 0.00 0.00 0.00 2.69
2330 2892 6.372659 ACAGAGCACCAGATAATGTAAGTTTG 59.627 38.462 0.00 0.00 0.00 2.93
2331 2893 6.476378 ACAGAGCACCAGATAATGTAAGTTT 58.524 36.000 0.00 0.00 0.00 2.66
2332 2894 6.054860 ACAGAGCACCAGATAATGTAAGTT 57.945 37.500 0.00 0.00 0.00 2.66
2333 2895 5.683876 ACAGAGCACCAGATAATGTAAGT 57.316 39.130 0.00 0.00 0.00 2.24
2334 2896 6.992063 AAACAGAGCACCAGATAATGTAAG 57.008 37.500 0.00 0.00 0.00 2.34
2335 2897 6.939730 TGAAAACAGAGCACCAGATAATGTAA 59.060 34.615 0.00 0.00 0.00 2.41
2336 2898 6.472016 TGAAAACAGAGCACCAGATAATGTA 58.528 36.000 0.00 0.00 0.00 2.29
2337 2899 5.316167 TGAAAACAGAGCACCAGATAATGT 58.684 37.500 0.00 0.00 0.00 2.71
2338 2900 5.885230 TGAAAACAGAGCACCAGATAATG 57.115 39.130 0.00 0.00 0.00 1.90
2339 2901 7.472334 AAATGAAAACAGAGCACCAGATAAT 57.528 32.000 0.00 0.00 0.00 1.28
2340 2902 6.899393 AAATGAAAACAGAGCACCAGATAA 57.101 33.333 0.00 0.00 0.00 1.75
2341 2903 7.168219 ACTAAATGAAAACAGAGCACCAGATA 58.832 34.615 0.00 0.00 0.00 1.98
2342 2904 6.006449 ACTAAATGAAAACAGAGCACCAGAT 58.994 36.000 0.00 0.00 0.00 2.90
2343 2905 5.376625 ACTAAATGAAAACAGAGCACCAGA 58.623 37.500 0.00 0.00 0.00 3.86
2344 2906 5.695851 ACTAAATGAAAACAGAGCACCAG 57.304 39.130 0.00 0.00 0.00 4.00
2352 2933 5.448632 GGGCGGACATACTAAATGAAAACAG 60.449 44.000 0.00 0.00 0.00 3.16
2383 2964 1.611977 TCAATGGTATACTCGGCTCCG 59.388 52.381 2.25 1.14 41.35 4.63
2401 2982 6.942005 TCCATTCAACTGAATTAAGCTCTTCA 59.058 34.615 2.11 6.27 42.41 3.02
2450 3031 4.019919 AGTGGAATTCAATTTCATCGCG 57.980 40.909 7.93 0.00 28.88 5.87
2473 3054 9.429109 AAGATACCTGAAAACCCTTTTCTTAAA 57.571 29.630 8.51 0.00 47.00 1.52
2483 3064 4.398358 GCAACCTAAGATACCTGAAAACCC 59.602 45.833 0.00 0.00 0.00 4.11
2485 3066 5.254115 AGGCAACCTAAGATACCTGAAAAC 58.746 41.667 0.00 0.00 28.47 2.43
2489 3070 4.162320 CAGAAGGCAACCTAAGATACCTGA 59.838 45.833 0.00 0.00 31.13 3.86
2492 3073 3.206964 GCAGAAGGCAACCTAAGATACC 58.793 50.000 0.00 0.00 43.97 2.73
2594 3177 9.307121 CATTAACAAAAGGTTTGTAATCACACA 57.693 29.630 6.78 0.00 40.96 3.72
2595 3178 9.308318 ACATTAACAAAAGGTTTGTAATCACAC 57.692 29.630 6.78 0.00 40.96 3.82
2731 3377 4.182693 TGACAGTAACATACCACTTCCG 57.817 45.455 0.00 0.00 0.00 4.30
2771 3417 7.668052 ACAATAAGCTTCTTACACCAATTACCA 59.332 33.333 0.00 0.00 0.00 3.25
2813 3460 6.266103 CACCCAAATAAATGCACCATAGATCT 59.734 38.462 0.00 0.00 0.00 2.75
2838 3485 2.972819 GCCTCTCCTTCCCCACACC 61.973 68.421 0.00 0.00 0.00 4.16
2847 3494 1.908340 ATGCTTCTGCGCCTCTCCTT 61.908 55.000 4.18 0.00 43.34 3.36
2857 3504 3.003068 CCAACTATGCTACATGCTTCTGC 59.997 47.826 0.00 0.00 43.37 4.26
2860 3507 3.545703 ACCCAACTATGCTACATGCTTC 58.454 45.455 0.00 0.00 43.37 3.86
2870 3517 3.343941 TGAGTGGTAACCCAACTATGC 57.656 47.619 0.00 0.00 44.15 3.14
2877 3741 5.072600 AGACTTTACATTGAGTGGTAACCCA 59.927 40.000 0.00 0.00 38.87 4.51
2879 3743 8.788325 ATAAGACTTTACATTGAGTGGTAACC 57.212 34.615 0.00 0.00 0.00 2.85
2933 3949 1.597663 CAACTGAAGACGTGTGTTCCC 59.402 52.381 7.34 0.00 32.52 3.97
2942 3958 4.466828 CAATTAGTTGCCAACTGAAGACG 58.533 43.478 20.12 0.34 42.84 4.18
2946 3962 3.230134 AGCCAATTAGTTGCCAACTGAA 58.770 40.909 20.12 10.41 42.84 3.02
2992 4008 6.830912 AGTAGAGATATTTAATGCCAGCACA 58.169 36.000 0.00 0.00 0.00 4.57
3024 4040 3.767673 GGAAGAGAAACCAATAAACCCCC 59.232 47.826 0.00 0.00 0.00 5.40
3025 4041 4.412843 TGGAAGAGAAACCAATAAACCCC 58.587 43.478 0.00 0.00 32.93 4.95
3026 4042 5.714806 TGATGGAAGAGAAACCAATAAACCC 59.285 40.000 0.00 0.00 39.69 4.11
3027 4043 6.434340 AGTGATGGAAGAGAAACCAATAAACC 59.566 38.462 0.00 0.00 39.69 3.27
3028 4044 7.454260 AGTGATGGAAGAGAAACCAATAAAC 57.546 36.000 0.00 0.00 39.69 2.01
3029 4045 7.176690 GGAAGTGATGGAAGAGAAACCAATAAA 59.823 37.037 0.00 0.00 39.69 1.40
3030 4046 6.659242 GGAAGTGATGGAAGAGAAACCAATAA 59.341 38.462 0.00 0.00 39.69 1.40
3031 4047 6.180472 GGAAGTGATGGAAGAGAAACCAATA 58.820 40.000 0.00 0.00 39.69 1.90
3032 4048 5.012893 GGAAGTGATGGAAGAGAAACCAAT 58.987 41.667 0.00 0.00 39.69 3.16
3033 4049 4.141274 TGGAAGTGATGGAAGAGAAACCAA 60.141 41.667 0.00 0.00 39.69 3.67
3034 4050 3.394274 TGGAAGTGATGGAAGAGAAACCA 59.606 43.478 0.00 0.00 40.57 3.67
3035 4051 3.753797 GTGGAAGTGATGGAAGAGAAACC 59.246 47.826 0.00 0.00 0.00 3.27
3036 4052 3.753797 GGTGGAAGTGATGGAAGAGAAAC 59.246 47.826 0.00 0.00 0.00 2.78
3037 4053 3.244911 GGGTGGAAGTGATGGAAGAGAAA 60.245 47.826 0.00 0.00 0.00 2.52
3038 4054 2.305927 GGGTGGAAGTGATGGAAGAGAA 59.694 50.000 0.00 0.00 0.00 2.87
3039 4055 1.909302 GGGTGGAAGTGATGGAAGAGA 59.091 52.381 0.00 0.00 0.00 3.10
3040 4056 1.065126 GGGGTGGAAGTGATGGAAGAG 60.065 57.143 0.00 0.00 0.00 2.85
3041 4057 0.991920 GGGGTGGAAGTGATGGAAGA 59.008 55.000 0.00 0.00 0.00 2.87
3042 4058 0.995024 AGGGGTGGAAGTGATGGAAG 59.005 55.000 0.00 0.00 0.00 3.46
3043 4059 0.991920 GAGGGGTGGAAGTGATGGAA 59.008 55.000 0.00 0.00 0.00 3.53
3044 4060 0.914417 GGAGGGGTGGAAGTGATGGA 60.914 60.000 0.00 0.00 0.00 3.41
3045 4061 1.609783 GGAGGGGTGGAAGTGATGG 59.390 63.158 0.00 0.00 0.00 3.51
3046 4062 1.207488 TGGGAGGGGTGGAAGTGATG 61.207 60.000 0.00 0.00 0.00 3.07
3047 4063 1.163309 TGGGAGGGGTGGAAGTGAT 59.837 57.895 0.00 0.00 0.00 3.06
3048 4064 1.846124 GTGGGAGGGGTGGAAGTGA 60.846 63.158 0.00 0.00 0.00 3.41
3049 4065 2.757077 GTGGGAGGGGTGGAAGTG 59.243 66.667 0.00 0.00 0.00 3.16
3050 4066 2.531942 GGTGGGAGGGGTGGAAGT 60.532 66.667 0.00 0.00 0.00 3.01
3051 4067 1.509548 ATTGGTGGGAGGGGTGGAAG 61.510 60.000 0.00 0.00 0.00 3.46
3052 4068 1.077298 AATTGGTGGGAGGGGTGGAA 61.077 55.000 0.00 0.00 0.00 3.53
3053 4069 1.077298 AAATTGGTGGGAGGGGTGGA 61.077 55.000 0.00 0.00 0.00 4.02
3054 4070 0.178906 AAAATTGGTGGGAGGGGTGG 60.179 55.000 0.00 0.00 0.00 4.61
3055 4071 1.728323 AAAAATTGGTGGGAGGGGTG 58.272 50.000 0.00 0.00 0.00 4.61
3073 4089 3.759618 GGATATCGTGTGGGTTGGAAAAA 59.240 43.478 0.00 0.00 0.00 1.94
3074 4090 3.244946 TGGATATCGTGTGGGTTGGAAAA 60.245 43.478 0.00 0.00 0.00 2.29
3075 4091 2.306219 TGGATATCGTGTGGGTTGGAAA 59.694 45.455 0.00 0.00 0.00 3.13
3076 4092 1.909986 TGGATATCGTGTGGGTTGGAA 59.090 47.619 0.00 0.00 0.00 3.53
3077 4093 1.574263 TGGATATCGTGTGGGTTGGA 58.426 50.000 0.00 0.00 0.00 3.53
3078 4094 2.411628 TTGGATATCGTGTGGGTTGG 57.588 50.000 0.00 0.00 0.00 3.77
3079 4095 3.126858 CAGTTTGGATATCGTGTGGGTTG 59.873 47.826 0.00 0.00 0.00 3.77
3080 4096 3.008594 TCAGTTTGGATATCGTGTGGGTT 59.991 43.478 0.00 0.00 0.00 4.11
3081 4097 2.569853 TCAGTTTGGATATCGTGTGGGT 59.430 45.455 0.00 0.00 0.00 4.51
3082 4098 2.936498 GTCAGTTTGGATATCGTGTGGG 59.064 50.000 0.00 0.00 0.00 4.61
3083 4099 2.936498 GGTCAGTTTGGATATCGTGTGG 59.064 50.000 0.00 0.00 0.00 4.17
3084 4100 2.936498 GGGTCAGTTTGGATATCGTGTG 59.064 50.000 0.00 0.00 0.00 3.82
3085 4101 2.093128 GGGGTCAGTTTGGATATCGTGT 60.093 50.000 0.00 0.00 0.00 4.49
3086 4102 2.561569 GGGGTCAGTTTGGATATCGTG 58.438 52.381 0.00 0.00 0.00 4.35
3087 4103 1.489230 GGGGGTCAGTTTGGATATCGT 59.511 52.381 0.00 0.00 0.00 3.73
3088 4104 2.256117 GGGGGTCAGTTTGGATATCG 57.744 55.000 0.00 0.00 0.00 2.92
3104 4120 1.303317 CAAAACGAGGAGGTGGGGG 60.303 63.158 0.00 0.00 0.00 5.40
3105 4121 1.303317 CCAAAACGAGGAGGTGGGG 60.303 63.158 0.00 0.00 0.00 4.96
3106 4122 1.303317 CCCAAAACGAGGAGGTGGG 60.303 63.158 0.00 0.00 42.94 4.61
3107 4123 1.303317 CCCCAAAACGAGGAGGTGG 60.303 63.158 0.00 0.00 0.00 4.61
3108 4124 1.303317 CCCCCAAAACGAGGAGGTG 60.303 63.158 0.00 0.00 0.00 4.00
3109 4125 1.063654 TTCCCCCAAAACGAGGAGGT 61.064 55.000 0.00 0.00 0.00 3.85
3110 4126 0.111639 TTTCCCCCAAAACGAGGAGG 59.888 55.000 0.00 0.00 0.00 4.30
3111 4127 1.989706 TTTTCCCCCAAAACGAGGAG 58.010 50.000 0.00 0.00 0.00 3.69
3112 4128 2.456073 TTTTTCCCCCAAAACGAGGA 57.544 45.000 0.00 0.00 33.47 3.71
3113 4129 2.028476 GGATTTTTCCCCCAAAACGAGG 60.028 50.000 0.00 0.00 33.47 4.63
3114 4130 2.028476 GGGATTTTTCCCCCAAAACGAG 60.028 50.000 0.00 0.00 44.18 4.18
3115 4131 1.972075 GGGATTTTTCCCCCAAAACGA 59.028 47.619 0.00 0.00 44.18 3.85
3116 4132 2.465860 GGGATTTTTCCCCCAAAACG 57.534 50.000 0.00 0.00 44.18 3.60
3123 4139 5.390619 TGCTTTGCAAGGGATTTTTCCCC 62.391 47.826 10.89 0.00 41.67 4.81
3124 4140 2.224499 TGCTTTGCAAGGGATTTTTCCC 60.224 45.455 10.89 2.66 41.29 3.97
3125 4141 3.124578 TGCTTTGCAAGGGATTTTTCC 57.875 42.857 10.89 0.00 34.76 3.13
3137 4153 4.946445 TGATTTCTGTTGATTGCTTTGCA 58.054 34.783 0.00 0.00 36.47 4.08
3138 4154 5.910637 TTGATTTCTGTTGATTGCTTTGC 57.089 34.783 0.00 0.00 0.00 3.68
3142 4158 9.079833 CGATTAATTTGATTTCTGTTGATTGCT 57.920 29.630 0.00 0.00 0.00 3.91
3143 4159 7.842721 GCGATTAATTTGATTTCTGTTGATTGC 59.157 33.333 0.00 0.00 0.00 3.56
3144 4160 8.323140 GGCGATTAATTTGATTTCTGTTGATTG 58.677 33.333 0.00 0.00 0.00 2.67
3145 4161 8.034215 TGGCGATTAATTTGATTTCTGTTGATT 58.966 29.630 0.00 0.00 0.00 2.57
3146 4162 7.546358 TGGCGATTAATTTGATTTCTGTTGAT 58.454 30.769 0.00 0.00 0.00 2.57
3147 4163 6.918626 TGGCGATTAATTTGATTTCTGTTGA 58.081 32.000 0.00 0.00 0.00 3.18
3148 4164 7.579589 TTGGCGATTAATTTGATTTCTGTTG 57.420 32.000 0.00 0.00 0.00 3.33
3149 4165 9.520204 CTATTGGCGATTAATTTGATTTCTGTT 57.480 29.630 0.00 0.00 0.00 3.16
3150 4166 7.649306 GCTATTGGCGATTAATTTGATTTCTGT 59.351 33.333 0.00 0.00 0.00 3.41
3151 4167 7.648908 TGCTATTGGCGATTAATTTGATTTCTG 59.351 33.333 0.00 0.00 45.43 3.02
3152 4168 7.715657 TGCTATTGGCGATTAATTTGATTTCT 58.284 30.769 0.00 0.00 45.43 2.52
3153 4169 7.928908 TGCTATTGGCGATTAATTTGATTTC 57.071 32.000 0.00 0.00 45.43 2.17
3154 4170 8.196771 TCTTGCTATTGGCGATTAATTTGATTT 58.803 29.630 0.00 0.00 45.43 2.17
3155 4171 7.715657 TCTTGCTATTGGCGATTAATTTGATT 58.284 30.769 0.00 0.00 45.43 2.57
3156 4172 7.275888 TCTTGCTATTGGCGATTAATTTGAT 57.724 32.000 0.00 0.00 45.43 2.57
3157 4173 6.691754 TCTTGCTATTGGCGATTAATTTGA 57.308 33.333 0.00 0.00 45.43 2.69
3158 4174 7.754069 TTTCTTGCTATTGGCGATTAATTTG 57.246 32.000 0.00 0.00 45.43 2.32
3159 4175 7.653311 GGATTTCTTGCTATTGGCGATTAATTT 59.347 33.333 0.00 0.00 45.43 1.82
3160 4176 7.147976 GGATTTCTTGCTATTGGCGATTAATT 58.852 34.615 0.00 0.00 45.43 1.40
3161 4177 6.294731 GGGATTTCTTGCTATTGGCGATTAAT 60.295 38.462 0.00 0.00 45.43 1.40
3162 4178 5.009610 GGGATTTCTTGCTATTGGCGATTAA 59.990 40.000 0.00 0.00 45.43 1.40
3163 4179 4.518970 GGGATTTCTTGCTATTGGCGATTA 59.481 41.667 0.00 0.00 45.43 1.75
3164 4180 3.319122 GGGATTTCTTGCTATTGGCGATT 59.681 43.478 0.00 0.00 45.43 3.34
3165 4181 2.887152 GGGATTTCTTGCTATTGGCGAT 59.113 45.455 0.00 0.00 45.43 4.58
3166 4182 2.092429 AGGGATTTCTTGCTATTGGCGA 60.092 45.455 0.00 0.00 45.43 5.54
3167 4183 2.301346 AGGGATTTCTTGCTATTGGCG 58.699 47.619 0.00 0.00 45.43 5.69
3168 4184 4.050852 CAAGGGATTTCTTGCTATTGGC 57.949 45.455 0.00 0.00 37.84 4.52
3176 4192 5.841810 TGTTTACTTGCAAGGGATTTCTTG 58.158 37.500 29.18 2.39 44.97 3.02
3177 4193 6.127196 TGTTGTTTACTTGCAAGGGATTTCTT 60.127 34.615 29.18 9.13 0.00 2.52
3178 4194 5.362430 TGTTGTTTACTTGCAAGGGATTTCT 59.638 36.000 29.18 9.87 0.00 2.52
3179 4195 5.596845 TGTTGTTTACTTGCAAGGGATTTC 58.403 37.500 29.18 14.53 0.00 2.17
3180 4196 5.606348 TGTTGTTTACTTGCAAGGGATTT 57.394 34.783 29.18 11.33 0.00 2.17
3181 4197 5.606348 TTGTTGTTTACTTGCAAGGGATT 57.394 34.783 29.18 11.70 0.00 3.01
3182 4198 5.606348 TTTGTTGTTTACTTGCAAGGGAT 57.394 34.783 29.18 12.07 0.00 3.85
3183 4199 5.407407 TTTTGTTGTTTACTTGCAAGGGA 57.593 34.783 29.18 14.76 0.00 4.20
3184 4200 5.814705 TGATTTTGTTGTTTACTTGCAAGGG 59.185 36.000 29.18 7.81 0.00 3.95
3185 4201 6.900568 TGATTTTGTTGTTTACTTGCAAGG 57.099 33.333 29.18 12.28 0.00 3.61
3186 4202 9.424659 GATTTGATTTTGTTGTTTACTTGCAAG 57.575 29.630 24.84 24.84 0.00 4.01
3187 4203 8.939929 TGATTTGATTTTGTTGTTTACTTGCAA 58.060 25.926 0.00 0.00 0.00 4.08
3188 4204 8.386606 GTGATTTGATTTTGTTGTTTACTTGCA 58.613 29.630 0.00 0.00 0.00 4.08
3189 4205 7.578736 CGTGATTTGATTTTGTTGTTTACTTGC 59.421 33.333 0.00 0.00 0.00 4.01
3190 4206 8.591312 ACGTGATTTGATTTTGTTGTTTACTTG 58.409 29.630 0.00 0.00 0.00 3.16
3191 4207 8.696410 ACGTGATTTGATTTTGTTGTTTACTT 57.304 26.923 0.00 0.00 0.00 2.24
3192 4208 9.445786 CTACGTGATTTGATTTTGTTGTTTACT 57.554 29.630 0.00 0.00 0.00 2.24
3193 4209 9.228636 ACTACGTGATTTGATTTTGTTGTTTAC 57.771 29.630 0.00 0.00 0.00 2.01
3194 4210 9.790389 AACTACGTGATTTGATTTTGTTGTTTA 57.210 25.926 0.00 0.00 0.00 2.01
3195 4211 8.591312 CAACTACGTGATTTGATTTTGTTGTTT 58.409 29.630 0.00 0.00 0.00 2.83
3196 4212 7.757624 ACAACTACGTGATTTGATTTTGTTGTT 59.242 29.630 0.00 0.00 40.49 2.83
3197 4213 7.254852 ACAACTACGTGATTTGATTTTGTTGT 58.745 30.769 0.00 0.00 39.20 3.32
3198 4214 7.678194 ACAACTACGTGATTTGATTTTGTTG 57.322 32.000 0.00 0.00 37.60 3.33
3199 4215 9.445786 CTTACAACTACGTGATTTGATTTTGTT 57.554 29.630 0.00 0.00 0.00 2.83
3200 4216 8.617809 ACTTACAACTACGTGATTTGATTTTGT 58.382 29.630 0.00 0.00 0.00 2.83
3203 4219 9.263538 TGTACTTACAACTACGTGATTTGATTT 57.736 29.630 0.00 0.00 32.40 2.17
3204 4220 8.706035 GTGTACTTACAACTACGTGATTTGATT 58.294 33.333 0.00 0.00 38.04 2.57
3205 4221 7.868922 TGTGTACTTACAACTACGTGATTTGAT 59.131 33.333 0.00 0.00 38.04 2.57
3206 4222 7.201835 TGTGTACTTACAACTACGTGATTTGA 58.798 34.615 0.00 0.00 38.04 2.69
3207 4223 7.397512 TGTGTACTTACAACTACGTGATTTG 57.602 36.000 0.00 0.87 38.04 2.32
3208 4224 8.597662 ATTGTGTACTTACAACTACGTGATTT 57.402 30.769 0.00 0.00 42.74 2.17
3209 4225 8.086522 AGATTGTGTACTTACAACTACGTGATT 58.913 33.333 0.00 0.00 42.74 2.57
3210 4226 7.600065 AGATTGTGTACTTACAACTACGTGAT 58.400 34.615 0.00 0.00 42.74 3.06
3211 4227 6.973843 AGATTGTGTACTTACAACTACGTGA 58.026 36.000 0.00 0.00 42.74 4.35
3212 4228 6.859508 TGAGATTGTGTACTTACAACTACGTG 59.140 38.462 0.00 0.00 42.74 4.49
3213 4229 6.973843 TGAGATTGTGTACTTACAACTACGT 58.026 36.000 1.20 0.00 42.74 3.57
3214 4230 7.862741 TTGAGATTGTGTACTTACAACTACG 57.137 36.000 1.20 0.00 42.74 3.51
3215 4231 9.419297 TGATTGAGATTGTGTACTTACAACTAC 57.581 33.333 1.20 0.00 42.74 2.73
3216 4232 9.419297 GTGATTGAGATTGTGTACTTACAACTA 57.581 33.333 1.20 0.00 42.74 2.24
3217 4233 7.931407 TGTGATTGAGATTGTGTACTTACAACT 59.069 33.333 1.20 2.17 42.74 3.16
3218 4234 8.083462 TGTGATTGAGATTGTGTACTTACAAC 57.917 34.615 1.20 0.00 42.74 3.32
3219 4235 8.846943 ATGTGATTGAGATTGTGTACTTACAA 57.153 30.769 1.65 1.65 43.93 2.41
3220 4236 8.093927 TGATGTGATTGAGATTGTGTACTTACA 58.906 33.333 0.00 0.00 0.00 2.41
3221 4237 8.479313 TGATGTGATTGAGATTGTGTACTTAC 57.521 34.615 0.00 0.00 0.00 2.34
3223 4239 9.842775 ATATGATGTGATTGAGATTGTGTACTT 57.157 29.630 0.00 0.00 0.00 2.24
3224 4240 9.486497 GATATGATGTGATTGAGATTGTGTACT 57.514 33.333 0.00 0.00 0.00 2.73
3225 4241 9.486497 AGATATGATGTGATTGAGATTGTGTAC 57.514 33.333 0.00 0.00 0.00 2.90
3227 4243 8.975663 AAGATATGATGTGATTGAGATTGTGT 57.024 30.769 0.00 0.00 0.00 3.72
3228 4244 9.880064 GAAAGATATGATGTGATTGAGATTGTG 57.120 33.333 0.00 0.00 0.00 3.33
3229 4245 9.064706 GGAAAGATATGATGTGATTGAGATTGT 57.935 33.333 0.00 0.00 0.00 2.71
3230 4246 8.228464 CGGAAAGATATGATGTGATTGAGATTG 58.772 37.037 0.00 0.00 0.00 2.67
3231 4247 7.935755 ACGGAAAGATATGATGTGATTGAGATT 59.064 33.333 0.00 0.00 0.00 2.40
3232 4248 7.448420 ACGGAAAGATATGATGTGATTGAGAT 58.552 34.615 0.00 0.00 0.00 2.75
3233 4249 6.820335 ACGGAAAGATATGATGTGATTGAGA 58.180 36.000 0.00 0.00 0.00 3.27
3234 4250 8.491152 GTTACGGAAAGATATGATGTGATTGAG 58.509 37.037 0.00 0.00 0.00 3.02
3235 4251 8.204160 AGTTACGGAAAGATATGATGTGATTGA 58.796 33.333 0.00 0.00 0.00 2.57
3236 4252 8.370493 AGTTACGGAAAGATATGATGTGATTG 57.630 34.615 0.00 0.00 0.00 2.67
3237 4253 8.964476 AAGTTACGGAAAGATATGATGTGATT 57.036 30.769 0.00 0.00 0.00 2.57
3238 4254 8.830580 CAAAGTTACGGAAAGATATGATGTGAT 58.169 33.333 0.00 0.00 0.00 3.06
3239 4255 7.201609 GCAAAGTTACGGAAAGATATGATGTGA 60.202 37.037 0.00 0.00 0.00 3.58
3240 4256 6.907212 GCAAAGTTACGGAAAGATATGATGTG 59.093 38.462 0.00 0.00 0.00 3.21
3241 4257 6.038271 GGCAAAGTTACGGAAAGATATGATGT 59.962 38.462 0.00 0.00 0.00 3.06
3242 4258 6.260936 AGGCAAAGTTACGGAAAGATATGATG 59.739 38.462 0.00 0.00 0.00 3.07
3243 4259 6.357367 AGGCAAAGTTACGGAAAGATATGAT 58.643 36.000 0.00 0.00 0.00 2.45
3244 4260 5.741011 AGGCAAAGTTACGGAAAGATATGA 58.259 37.500 0.00 0.00 0.00 2.15
3245 4261 7.307989 CCATAGGCAAAGTTACGGAAAGATATG 60.308 40.741 0.00 0.00 0.00 1.78
3246 4262 6.710744 CCATAGGCAAAGTTACGGAAAGATAT 59.289 38.462 0.00 0.00 0.00 1.63
3247 4263 6.053005 CCATAGGCAAAGTTACGGAAAGATA 58.947 40.000 0.00 0.00 0.00 1.98
3248 4264 4.881850 CCATAGGCAAAGTTACGGAAAGAT 59.118 41.667 0.00 0.00 0.00 2.40
3249 4265 4.020039 TCCATAGGCAAAGTTACGGAAAGA 60.020 41.667 0.00 0.00 0.00 2.52
3250 4266 4.258543 TCCATAGGCAAAGTTACGGAAAG 58.741 43.478 0.00 0.00 0.00 2.62
3251 4267 4.289238 TCCATAGGCAAAGTTACGGAAA 57.711 40.909 0.00 0.00 0.00 3.13
3252 4268 3.985019 TCCATAGGCAAAGTTACGGAA 57.015 42.857 0.00 0.00 0.00 4.30
3253 4269 4.448210 GAATCCATAGGCAAAGTTACGGA 58.552 43.478 0.00 0.00 0.00 4.69
3254 4270 3.564225 GGAATCCATAGGCAAAGTTACGG 59.436 47.826 0.00 0.00 0.00 4.02
3255 4271 3.564225 GGGAATCCATAGGCAAAGTTACG 59.436 47.826 0.09 0.00 0.00 3.18
3256 4272 4.793201 AGGGAATCCATAGGCAAAGTTAC 58.207 43.478 0.09 0.00 34.83 2.50
3257 4273 5.048846 GAGGGAATCCATAGGCAAAGTTA 57.951 43.478 0.09 0.00 34.83 2.24
3258 4274 3.903467 GAGGGAATCCATAGGCAAAGTT 58.097 45.455 0.09 0.00 34.83 2.66
3259 4275 3.584733 GAGGGAATCCATAGGCAAAGT 57.415 47.619 0.09 0.00 34.83 2.66
3271 4287 1.768684 TATGCTGCGGGGAGGGAATC 61.769 60.000 0.00 0.00 0.00 2.52
3272 4288 1.136329 ATATGCTGCGGGGAGGGAAT 61.136 55.000 0.00 0.00 0.00 3.01
3273 4289 1.768684 GATATGCTGCGGGGAGGGAA 61.769 60.000 0.00 0.00 0.00 3.97
3274 4290 2.122413 ATATGCTGCGGGGAGGGA 60.122 61.111 0.00 0.00 0.00 4.20
3275 4291 2.177594 GAGATATGCTGCGGGGAGGG 62.178 65.000 0.00 0.00 0.00 4.30
3276 4292 1.294780 GAGATATGCTGCGGGGAGG 59.705 63.158 0.00 0.00 0.00 4.30
3277 4293 0.394192 TTGAGATATGCTGCGGGGAG 59.606 55.000 0.00 0.00 0.00 4.30
3278 4294 1.002430 GATTGAGATATGCTGCGGGGA 59.998 52.381 0.00 0.00 0.00 4.81
3279 4295 1.002888 AGATTGAGATATGCTGCGGGG 59.997 52.381 0.00 0.00 0.00 5.73
3280 4296 2.289257 TGAGATTGAGATATGCTGCGGG 60.289 50.000 0.00 0.00 0.00 6.13
3281 4297 3.036075 TGAGATTGAGATATGCTGCGG 57.964 47.619 0.00 0.00 0.00 5.69
3282 4298 3.617706 GGATGAGATTGAGATATGCTGCG 59.382 47.826 0.00 0.00 0.00 5.18
3283 4299 3.940221 GGGATGAGATTGAGATATGCTGC 59.060 47.826 0.00 0.00 0.00 5.25
3284 4300 5.161943 TGGGATGAGATTGAGATATGCTG 57.838 43.478 0.00 0.00 0.00 4.41
3285 4301 5.837770 TTGGGATGAGATTGAGATATGCT 57.162 39.130 0.00 0.00 0.00 3.79
3286 4302 6.178324 TGATTGGGATGAGATTGAGATATGC 58.822 40.000 0.00 0.00 0.00 3.14
3287 4303 8.631480 TTTGATTGGGATGAGATTGAGATATG 57.369 34.615 0.00 0.00 0.00 1.78
3288 4304 9.650714 TTTTTGATTGGGATGAGATTGAGATAT 57.349 29.630 0.00 0.00 0.00 1.63
3290 4306 7.966339 TTTTTGATTGGGATGAGATTGAGAT 57.034 32.000 0.00 0.00 0.00 2.75
3312 4328 7.681939 TCTATTGGTTCAGCGTAGAATTTTT 57.318 32.000 0.00 0.00 0.00 1.94
3313 4329 7.681939 TTCTATTGGTTCAGCGTAGAATTTT 57.318 32.000 0.00 0.00 0.00 1.82
3314 4330 7.865706 ATTCTATTGGTTCAGCGTAGAATTT 57.134 32.000 9.15 0.00 38.35 1.82
3315 4331 8.958119 TTATTCTATTGGTTCAGCGTAGAATT 57.042 30.769 15.67 0.00 40.58 2.17
3316 4332 8.958119 TTTATTCTATTGGTTCAGCGTAGAAT 57.042 30.769 15.17 15.17 41.99 2.40
3317 4333 8.038944 ACTTTATTCTATTGGTTCAGCGTAGAA 58.961 33.333 0.00 0.00 36.26 2.10
3318 4334 7.553334 ACTTTATTCTATTGGTTCAGCGTAGA 58.447 34.615 0.00 0.00 0.00 2.59
3319 4335 7.772332 ACTTTATTCTATTGGTTCAGCGTAG 57.228 36.000 0.00 0.00 0.00 3.51
3320 4336 7.413657 GCAACTTTATTCTATTGGTTCAGCGTA 60.414 37.037 0.00 0.00 0.00 4.42
3321 4337 6.622896 GCAACTTTATTCTATTGGTTCAGCGT 60.623 38.462 0.00 0.00 0.00 5.07
3322 4338 5.739161 GCAACTTTATTCTATTGGTTCAGCG 59.261 40.000 0.00 0.00 0.00 5.18
3323 4339 6.036470 GGCAACTTTATTCTATTGGTTCAGC 58.964 40.000 0.00 0.00 0.00 4.26
3324 4340 6.378280 AGGGCAACTTTATTCTATTGGTTCAG 59.622 38.462 0.00 0.00 0.00 3.02
3325 4341 6.152661 CAGGGCAACTTTATTCTATTGGTTCA 59.847 38.462 0.00 0.00 0.00 3.18
3326 4342 6.152831 ACAGGGCAACTTTATTCTATTGGTTC 59.847 38.462 0.00 0.00 0.00 3.62
3327 4343 6.016555 ACAGGGCAACTTTATTCTATTGGTT 58.983 36.000 0.00 0.00 0.00 3.67
3328 4344 5.580022 ACAGGGCAACTTTATTCTATTGGT 58.420 37.500 0.00 0.00 0.00 3.67
3329 4345 6.332630 CAACAGGGCAACTTTATTCTATTGG 58.667 40.000 0.00 0.00 0.00 3.16
3330 4346 5.807011 GCAACAGGGCAACTTTATTCTATTG 59.193 40.000 0.00 0.00 0.00 1.90
3331 4347 5.480073 TGCAACAGGGCAACTTTATTCTATT 59.520 36.000 0.00 0.00 41.65 1.73
3332 4348 5.016173 TGCAACAGGGCAACTTTATTCTAT 58.984 37.500 0.00 0.00 41.65 1.98
3333 4349 4.402829 TGCAACAGGGCAACTTTATTCTA 58.597 39.130 0.00 0.00 41.65 2.10
3334 4350 3.230134 TGCAACAGGGCAACTTTATTCT 58.770 40.909 0.00 0.00 41.65 2.40
3335 4351 3.658757 TGCAACAGGGCAACTTTATTC 57.341 42.857 0.00 0.00 41.65 1.75
3344 4360 2.186160 CGTGAGTTGCAACAGGGCA 61.186 57.895 30.11 18.75 43.19 5.36
3345 4361 2.639286 CGTGAGTTGCAACAGGGC 59.361 61.111 30.11 16.56 0.00 5.19
3346 4362 2.260869 CCCGTGAGTTGCAACAGGG 61.261 63.158 30.11 27.98 40.38 4.45
3347 4363 0.250124 TACCCGTGAGTTGCAACAGG 60.250 55.000 30.11 24.08 0.00 4.00
3348 4364 1.808411 ATACCCGTGAGTTGCAACAG 58.192 50.000 30.11 17.51 0.00 3.16
3349 4365 2.264005 AATACCCGTGAGTTGCAACA 57.736 45.000 30.11 9.08 0.00 3.33
3350 4366 3.425758 GCTAAATACCCGTGAGTTGCAAC 60.426 47.826 22.17 22.17 0.00 4.17
3351 4367 2.745281 GCTAAATACCCGTGAGTTGCAA 59.255 45.455 0.00 0.00 0.00 4.08
3352 4368 2.027561 AGCTAAATACCCGTGAGTTGCA 60.028 45.455 0.00 0.00 0.00 4.08
3353 4369 2.629051 AGCTAAATACCCGTGAGTTGC 58.371 47.619 0.00 0.00 0.00 4.17
3354 4370 4.804139 CACTAGCTAAATACCCGTGAGTTG 59.196 45.833 0.00 0.00 0.00 3.16
3355 4371 4.708421 TCACTAGCTAAATACCCGTGAGTT 59.292 41.667 5.82 0.00 0.00 3.01
3356 4372 4.275810 TCACTAGCTAAATACCCGTGAGT 58.724 43.478 5.82 0.00 0.00 3.41
3357 4373 4.579340 TCTCACTAGCTAAATACCCGTGAG 59.421 45.833 22.01 22.01 44.86 3.51
3358 4374 4.529897 TCTCACTAGCTAAATACCCGTGA 58.470 43.478 8.81 8.81 0.00 4.35
3359 4375 4.913335 TCTCACTAGCTAAATACCCGTG 57.087 45.455 0.00 0.00 0.00 4.94
3360 4376 5.927281 TTTCTCACTAGCTAAATACCCGT 57.073 39.130 0.00 0.00 0.00 5.28
3361 4377 8.882415 TTATTTTCTCACTAGCTAAATACCCG 57.118 34.615 0.00 0.00 0.00 5.28
3368 4384 9.944376 ACTCATGTTTATTTTCTCACTAGCTAA 57.056 29.630 0.00 0.00 0.00 3.09
3369 4385 9.587772 GACTCATGTTTATTTTCTCACTAGCTA 57.412 33.333 0.00 0.00 0.00 3.32
3370 4386 8.097038 TGACTCATGTTTATTTTCTCACTAGCT 58.903 33.333 0.00 0.00 0.00 3.32
3371 4387 8.256611 TGACTCATGTTTATTTTCTCACTAGC 57.743 34.615 0.00 0.00 0.00 3.42
3414 4430 2.575532 CACCATATCAAATCCTGCGGT 58.424 47.619 0.00 0.00 0.00 5.68
3415 4431 1.881973 CCACCATATCAAATCCTGCGG 59.118 52.381 0.00 0.00 0.00 5.69
3416 4432 1.267806 GCCACCATATCAAATCCTGCG 59.732 52.381 0.00 0.00 0.00 5.18
3427 4443 1.212935 GAACAGGTCAGGCCACCATAT 59.787 52.381 14.41 0.00 39.16 1.78
3447 4475 9.273016 TCAAACTTAACTCAGATTAAACTCCAG 57.727 33.333 0.00 0.00 0.00 3.86
3486 4514 6.672593 TGCAAGGGATATTACAGGAAAATCT 58.327 36.000 0.00 0.00 0.00 2.40
3772 4810 8.408743 GGATACAATAGACACAAGTGTAAGTC 57.591 38.462 5.74 0.00 45.05 3.01
3916 4954 1.607178 TAAACCGTGGGGCTCGAGA 60.607 57.895 18.75 0.00 36.48 4.04
3989 5027 5.759059 AGATGAAACAAGATGCCATAGGAA 58.241 37.500 0.00 0.00 0.00 3.36
3995 5033 5.682234 TCTCTAGATGAAACAAGATGCCA 57.318 39.130 0.00 0.00 0.00 4.92
4055 5097 8.254508 AGTTAGACCAGCTCAGAAGTTATAAAG 58.745 37.037 0.00 0.00 0.00 1.85
4066 5108 2.093764 CCTCCAAGTTAGACCAGCTCAG 60.094 54.545 0.00 0.00 0.00 3.35
4470 5514 2.522836 AGATGATAGCTCCAGTTGCG 57.477 50.000 0.00 0.00 35.28 4.85
4481 5525 4.452795 TCCTCGACGAAGCTAAGATGATAG 59.547 45.833 0.00 0.00 0.00 2.08
4532 5576 9.777297 ACCAAACAGCTTATTAACAATTGAAAT 57.223 25.926 13.59 13.17 0.00 2.17
4579 5623 4.321040 AAAACAGCGACGTTTTAGCAACG 61.321 43.478 12.10 6.28 45.00 4.10
4583 5667 1.446833 GCAAAACAGCGACGTTTTAGC 59.553 47.619 13.04 14.02 45.05 3.09
4634 5722 4.212716 TGAACTACAGTCACAGGTACACT 58.787 43.478 0.00 0.00 0.00 3.55
4660 5748 7.826260 ACTCACCATGTTAAACAAAACAAAG 57.174 32.000 0.00 0.00 42.33 2.77
4678 5766 6.500684 TTTAGCATTCAATCAGAACTCACC 57.499 37.500 0.00 0.00 39.49 4.02
4715 5803 5.068591 GGCTATTTCATGAAAATTACCGGGT 59.931 40.000 23.91 4.46 38.53 5.28
4723 5811 6.811634 TCAATGGGGCTATTTCATGAAAAT 57.188 33.333 23.91 14.63 40.67 1.82
4724 5812 6.408320 CCATCAATGGGGCTATTTCATGAAAA 60.408 38.462 23.91 12.56 44.31 2.29
4764 5852 3.414193 CCCCCAGCCTCTGCATCA 61.414 66.667 0.00 0.00 41.13 3.07
4765 5853 3.412624 GACCCCCAGCCTCTGCATC 62.413 68.421 0.00 0.00 41.13 3.91
4776 5864 0.999712 GAAAAGGAGGATGACCCCCA 59.000 55.000 0.00 0.00 36.73 4.96
4777 5865 0.999712 TGAAAAGGAGGATGACCCCC 59.000 55.000 0.00 0.00 36.73 5.40
4805 5893 3.106827 CCCTGTCAATGGGGCTATTTTT 58.893 45.455 0.00 0.00 40.97 1.94
4806 5894 2.750814 CCCTGTCAATGGGGCTATTTT 58.249 47.619 0.00 0.00 40.97 1.82
4843 5931 0.807667 GCAGCGTGCTAGCATGTACT 60.808 55.000 31.97 21.23 40.96 2.73
4855 5943 1.675310 TTGGAATGGAGGCAGCGTG 60.675 57.895 0.00 0.00 0.00 5.34
4857 5945 1.033746 ATGTTGGAATGGAGGCAGCG 61.034 55.000 0.00 0.00 0.00 5.18
4905 5997 6.356714 GCAACAAAACACTTCAACAACAAAAG 59.643 34.615 0.00 0.00 0.00 2.27
4977 6217 2.686405 CGCAGGATGGTAGTACACACTA 59.314 50.000 2.06 0.00 34.29 2.74
4978 6218 1.476891 CGCAGGATGGTAGTACACACT 59.523 52.381 2.06 0.00 36.04 3.55
4979 6219 1.922570 CGCAGGATGGTAGTACACAC 58.077 55.000 2.06 0.00 35.86 3.82
5131 6372 7.780271 ACTCACCTTCCTTTTCTACTGATTTTT 59.220 33.333 0.00 0.00 0.00 1.94
5132 6373 7.290813 ACTCACCTTCCTTTTCTACTGATTTT 58.709 34.615 0.00 0.00 0.00 1.82
5133 6374 6.842676 ACTCACCTTCCTTTTCTACTGATTT 58.157 36.000 0.00 0.00 0.00 2.17
5134 6375 6.441088 ACTCACCTTCCTTTTCTACTGATT 57.559 37.500 0.00 0.00 0.00 2.57
5135 6376 6.726764 AGTACTCACCTTCCTTTTCTACTGAT 59.273 38.462 0.00 0.00 0.00 2.90
5190 6431 9.271828 CTTCATTGGGTTAGCAAAAATAAACTT 57.728 29.630 0.00 0.00 0.00 2.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.