Multiple sequence alignment - TraesCS3B01G160600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G160600 chr3B 100.000 6727 0 0 2987 9713 156569843 156576569 0.000000e+00 12423.0
1 TraesCS3B01G160600 chr3B 100.000 2639 0 0 1 2639 156566857 156569495 0.000000e+00 4874.0
2 TraesCS3B01G160600 chr3B 91.225 661 57 1 3035 3695 472743249 472742590 0.000000e+00 898.0
3 TraesCS3B01G160600 chr3B 96.491 57 1 1 5969 6024 486386712 486386656 1.040000e-14 93.5
4 TraesCS3B01G160600 chr3D 97.684 5743 99 16 3696 9412 104703038 104708772 0.000000e+00 9838.0
5 TraesCS3B01G160600 chr3D 97.176 2160 27 13 506 2639 104700860 104703011 0.000000e+00 3620.0
6 TraesCS3B01G160600 chr3D 92.166 434 25 8 73 501 104700382 104700811 1.080000e-168 604.0
7 TraesCS3B01G160600 chr3D 95.620 137 5 1 73 209 104693261 104693396 1.640000e-52 219.0
8 TraesCS3B01G160600 chr3D 91.935 62 4 1 5964 6024 138887432 138887371 1.740000e-12 86.1
9 TraesCS3B01G160600 chr3D 80.952 105 7 8 1723 1825 26819905 26819998 4.870000e-08 71.3
10 TraesCS3B01G160600 chr3A 92.743 1998 84 19 3696 5659 550724132 550722162 0.000000e+00 2830.0
11 TraesCS3B01G160600 chr3A 89.088 1448 117 24 6034 7459 550721588 550720160 0.000000e+00 1760.0
12 TraesCS3B01G160600 chr3A 90.186 805 51 13 545 1337 550726763 550725975 0.000000e+00 1024.0
13 TraesCS3B01G160600 chr3A 92.496 693 42 6 7760 8445 550719734 550719045 0.000000e+00 983.0
14 TraesCS3B01G160600 chr3A 92.133 661 51 1 3035 3695 540949285 540949944 0.000000e+00 931.0
15 TraesCS3B01G160600 chr3A 88.973 526 44 8 8595 9107 550719043 550718519 1.060000e-178 638.0
16 TraesCS3B01G160600 chr3A 90.157 447 38 3 1819 2263 550725552 550725110 2.350000e-160 577.0
17 TraesCS3B01G160600 chr3A 86.145 332 24 9 5656 5969 550721927 550721600 1.210000e-88 339.0
18 TraesCS3B01G160600 chr3A 84.195 348 33 8 7376 7721 550720066 550719739 1.570000e-82 318.0
19 TraesCS3B01G160600 chr3A 86.857 175 12 5 2222 2389 550725121 550724951 1.670000e-42 185.0
20 TraesCS3B01G160600 chr3A 86.364 88 10 2 8444 8529 226074829 226074742 2.890000e-15 95.3
21 TraesCS3B01G160600 chr7B 93.062 663 42 3 3035 3696 336641898 336642557 0.000000e+00 966.0
22 TraesCS3B01G160600 chr7B 96.491 57 1 1 5969 6024 428965845 428965901 1.040000e-14 93.5
23 TraesCS3B01G160600 chr7B 90.625 64 5 1 5964 6026 719921248 719921311 6.250000e-12 84.2
24 TraesCS3B01G160600 chr5B 93.192 661 39 5 3035 3695 81489703 81490357 0.000000e+00 966.0
25 TraesCS3B01G160600 chr5B 92.934 651 43 2 3035 3685 697984846 697984199 0.000000e+00 944.0
26 TraesCS3B01G160600 chr5B 91.831 661 53 1 3035 3695 35697215 35697874 0.000000e+00 920.0
27 TraesCS3B01G160600 chr5B 81.935 155 14 7 8451 8594 490760934 490761085 1.710000e-22 119.0
28 TraesCS3B01G160600 chr5B 95.000 60 3 0 1717 1776 568409768 568409709 2.890000e-15 95.3
29 TraesCS3B01G160600 chr5B 78.395 162 21 9 8450 8597 96886411 96886572 1.040000e-14 93.5
30 TraesCS3B01G160600 chr5B 84.375 96 13 1 8434 8527 501472379 501472284 1.040000e-14 93.5
31 TraesCS3B01G160600 chr4A 92.620 664 47 2 3032 3695 544873019 544873680 0.000000e+00 953.0
32 TraesCS3B01G160600 chr4A 95.082 61 3 0 1716 1776 130241403 130241343 8.030000e-16 97.1
33 TraesCS3B01G160600 chr4A 95.000 60 2 1 5966 6024 618462261 618462202 1.040000e-14 93.5
34 TraesCS3B01G160600 chr4A 94.828 58 2 1 5968 6024 590228011 590227954 1.340000e-13 89.8
35 TraesCS3B01G160600 chr6B 92.296 662 50 1 3035 3696 576214402 576213742 0.000000e+00 939.0
36 TraesCS3B01G160600 chr6B 86.316 95 8 5 8439 8529 477102930 477102837 2.230000e-16 99.0
37 TraesCS3B01G160600 chr6B 89.855 69 5 2 1708 1776 630922674 630922740 4.830000e-13 87.9
38 TraesCS3B01G160600 chr6B 87.500 72 9 0 8529 8600 550373422 550373351 6.250000e-12 84.2
39 TraesCS3B01G160600 chr2D 91.982 661 52 1 3035 3695 323747998 323748657 0.000000e+00 926.0
40 TraesCS3B01G160600 chr2D 80.745 161 18 6 8450 8597 612720137 612720297 7.970000e-21 113.0
41 TraesCS3B01G160600 chr2D 79.167 168 20 4 8450 8602 376051254 376051421 1.730000e-17 102.0
42 TraesCS3B01G160600 chr2D 80.952 105 7 8 1723 1825 72514714 72514621 4.870000e-08 71.3
43 TraesCS3B01G160600 chr2B 84.856 383 55 3 4 384 104296378 104296759 5.500000e-102 383.0
44 TraesCS3B01G160600 chr1D 78.322 429 81 9 6031 6455 143957693 143958113 5.780000e-67 267.0
45 TraesCS3B01G160600 chr1D 84.906 212 32 0 8216 8427 143959576 143959787 2.120000e-51 215.0
46 TraesCS3B01G160600 chr1D 75.921 407 74 18 4490 4884 143956423 143956817 4.630000e-43 187.0
47 TraesCS3B01G160600 chr1D 86.228 167 21 2 7889 8054 143959320 143959485 7.750000e-41 180.0
48 TraesCS3B01G160600 chr1D 96.429 56 2 0 8542 8597 488565343 488565288 1.040000e-14 93.5
49 TraesCS3B01G160600 chr1D 91.045 67 5 1 1711 1776 375958884 375958818 1.340000e-13 89.8
50 TraesCS3B01G160600 chr1B 78.522 433 73 15 6031 6455 193285478 193285898 5.780000e-67 267.0
51 TraesCS3B01G160600 chr1B 84.434 212 33 0 8216 8427 193287341 193287552 9.880000e-50 209.0
52 TraesCS3B01G160600 chr1A 78.009 432 83 10 6031 6458 145373503 145373080 2.690000e-65 261.0
53 TraesCS3B01G160600 chr1A 82.390 159 14 1 8450 8594 291255822 291255980 1.020000e-24 126.0
54 TraesCS3B01G160600 chr1A 92.593 81 6 0 8450 8530 100360023 100359943 6.160000e-22 117.0
55 TraesCS3B01G160600 chr1A 94.444 54 1 2 5966 6018 296939082 296939134 2.250000e-11 82.4
56 TraesCS3B01G160600 chr6D 84.324 185 23 6 6992 7172 10669399 10669581 1.000000e-39 176.0
57 TraesCS3B01G160600 chr6D 83.230 161 22 5 6991 7148 108776266 108776424 1.020000e-29 143.0
58 TraesCS3B01G160600 chr6D 96.721 61 2 0 1716 1776 84938545 84938485 1.730000e-17 102.0
59 TraesCS3B01G160600 chr6D 96.610 59 2 0 1718 1776 84938458 84938516 2.230000e-16 99.0
60 TraesCS3B01G160600 chr7A 83.636 165 13 1 8450 8600 209149284 209149120 1.020000e-29 143.0
61 TraesCS3B01G160600 chr7A 78.182 165 22 1 8450 8600 620848842 620849006 1.040000e-14 93.5
62 TraesCS3B01G160600 chr7D 83.553 152 19 6 6989 7137 623010862 623010714 4.730000e-28 137.0
63 TraesCS3B01G160600 chr7D 86.207 87 11 1 8445 8530 597163910 597163996 1.040000e-14 93.5
64 TraesCS3B01G160600 chr7D 81.818 110 7 8 1718 1825 59311690 59311788 8.090000e-11 80.5
65 TraesCS3B01G160600 chr4B 90.244 82 7 1 8449 8529 144074496 144074415 1.330000e-18 106.0
66 TraesCS3B01G160600 chr5D 95.000 60 3 0 1717 1776 22271721 22271662 2.890000e-15 95.3
67 TraesCS3B01G160600 chr5D 83.654 104 9 4 1718 1820 356319441 356319537 3.740000e-14 91.6
68 TraesCS3B01G160600 chr5D 93.220 59 1 2 5969 6024 535136260 535136202 6.250000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G160600 chr3B 156566857 156576569 9712 False 8648.500000 12423 100.000000 1 9713 2 chr3B.!!$F1 9712
1 TraesCS3B01G160600 chr3B 472742590 472743249 659 True 898.000000 898 91.225000 3035 3695 1 chr3B.!!$R1 660
2 TraesCS3B01G160600 chr3D 104700382 104708772 8390 False 4687.333333 9838 95.675333 73 9412 3 chr3D.!!$F3 9339
3 TraesCS3B01G160600 chr3A 550718519 550726763 8244 True 961.555556 2830 88.982222 545 9107 9 chr3A.!!$R2 8562
4 TraesCS3B01G160600 chr3A 540949285 540949944 659 False 931.000000 931 92.133000 3035 3695 1 chr3A.!!$F1 660
5 TraesCS3B01G160600 chr7B 336641898 336642557 659 False 966.000000 966 93.062000 3035 3696 1 chr7B.!!$F1 661
6 TraesCS3B01G160600 chr5B 81489703 81490357 654 False 966.000000 966 93.192000 3035 3695 1 chr5B.!!$F2 660
7 TraesCS3B01G160600 chr5B 697984199 697984846 647 True 944.000000 944 92.934000 3035 3685 1 chr5B.!!$R3 650
8 TraesCS3B01G160600 chr5B 35697215 35697874 659 False 920.000000 920 91.831000 3035 3695 1 chr5B.!!$F1 660
9 TraesCS3B01G160600 chr4A 544873019 544873680 661 False 953.000000 953 92.620000 3032 3695 1 chr4A.!!$F1 663
10 TraesCS3B01G160600 chr6B 576213742 576214402 660 True 939.000000 939 92.296000 3035 3696 1 chr6B.!!$R3 661
11 TraesCS3B01G160600 chr2D 323747998 323748657 659 False 926.000000 926 91.982000 3035 3695 1 chr2D.!!$F1 660
12 TraesCS3B01G160600 chr1D 143956423 143959787 3364 False 212.250000 267 81.344250 4490 8427 4 chr1D.!!$F1 3937
13 TraesCS3B01G160600 chr1B 193285478 193287552 2074 False 238.000000 267 81.478000 6031 8427 2 chr1B.!!$F1 2396

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
53 54 0.107410 AAACTCCACAGGAACGCACA 60.107 50.000 0.0 0.0 0.00 4.57 F
57 58 0.179032 TCCACAGGAACGCACACATT 60.179 50.000 0.0 0.0 0.00 2.71 F
141 142 0.759346 ACCTCCGAAGAGCAACAACT 59.241 50.000 0.0 0.0 38.96 3.16 F
1234 1294 1.064906 TCGGAGGACGGTGAGATAGTT 60.065 52.381 0.0 0.0 44.45 2.24 F
1942 2103 0.839946 AGGGTGCTGTGACTTTCTGT 59.160 50.000 0.0 0.0 0.00 3.41 F
2527 3290 0.936764 CGCTATGTAGAGCCGCACTG 60.937 60.000 0.0 0.0 39.43 3.66 F
3669 4437 0.981183 TGATAGCACCCAGTTCCGTT 59.019 50.000 0.0 0.0 0.00 4.44 F
3675 4443 1.018910 CACCCAGTTCCGTTCGTTTT 58.981 50.000 0.0 0.0 0.00 2.43 F
3763 4531 4.766373 TCCTGCACATGTTATGTTTGTGAT 59.234 37.500 0.0 0.0 42.70 3.06 F
3766 4534 5.228665 TGCACATGTTATGTTTGTGATTGG 58.771 37.500 0.0 0.0 42.70 3.16 F
6862 8040 3.438360 CGAAGTACGTTTAATAGGCCGT 58.562 45.455 0.0 0.0 37.22 5.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1560 1646 1.078848 GATGCCACTTCTCACCGCT 60.079 57.895 0.00 0.0 0.00 5.52 R
1720 1806 2.817258 CAAGTATTTTGGAACGGAGGCA 59.183 45.455 0.00 0.0 0.00 4.75 R
1843 2004 4.688879 TGCAAACTCCACGTTAACTCATAG 59.311 41.667 3.71 0.0 33.90 2.23 R
2413 3176 1.096967 TTCACCACAGCACAGCACAG 61.097 55.000 0.00 0.0 0.00 3.66 R
3527 4292 0.872388 GAGCGGACACGGAAACAAAT 59.128 50.000 0.00 0.0 41.36 2.32 R
3705 4473 1.139853 CAGATTTAGAAGCGCCTCCCT 59.860 52.381 2.29 0.0 0.00 4.20 R
4796 5607 4.752101 AGAAAGTTCTCAGGTTTCACATCG 59.248 41.667 0.00 0.0 33.43 3.84 R
5599 6436 8.044908 GGTGACATGGATAAGTCCTTAAAGTTA 58.955 37.037 0.00 0.0 45.32 2.24 R
6862 8040 6.061441 CCATGTAACCAGATTGGCACTTATA 58.939 40.000 0.00 0.0 42.67 0.98 R
6933 8485 3.623060 CGTGGCAATCTTTGTGTATAGCT 59.377 43.478 0.00 0.0 0.00 3.32 R
9572 11503 0.033405 CTACAGGGACTCGAAGGGGA 60.033 60.000 0.00 0.0 34.60 4.81 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.138665 TCCGCTCCCACCATAACA 57.861 55.556 0.00 0.00 0.00 2.41
18 19 1.600107 TCCGCTCCCACCATAACAC 59.400 57.895 0.00 0.00 0.00 3.32
19 20 1.813753 CCGCTCCCACCATAACACG 60.814 63.158 0.00 0.00 0.00 4.49
20 21 1.813753 CGCTCCCACCATAACACGG 60.814 63.158 0.00 0.00 0.00 4.94
21 22 1.298667 GCTCCCACCATAACACGGT 59.701 57.895 0.00 0.00 37.16 4.83
28 29 2.094762 ACCATAACACGGTGAGAAGC 57.905 50.000 16.29 0.00 34.69 3.86
29 30 0.999406 CCATAACACGGTGAGAAGCG 59.001 55.000 16.29 0.00 0.00 4.68
30 31 1.403647 CCATAACACGGTGAGAAGCGA 60.404 52.381 16.29 0.00 0.00 4.93
31 32 2.333926 CATAACACGGTGAGAAGCGAA 58.666 47.619 16.29 0.00 0.00 4.70
32 33 2.512485 TAACACGGTGAGAAGCGAAA 57.488 45.000 16.29 0.00 0.00 3.46
33 34 1.878953 AACACGGTGAGAAGCGAAAT 58.121 45.000 16.29 0.00 0.00 2.17
34 35 2.736144 ACACGGTGAGAAGCGAAATA 57.264 45.000 16.29 0.00 0.00 1.40
35 36 3.034721 ACACGGTGAGAAGCGAAATAA 57.965 42.857 16.29 0.00 0.00 1.40
36 37 3.395639 ACACGGTGAGAAGCGAAATAAA 58.604 40.909 16.29 0.00 0.00 1.40
37 38 3.185797 ACACGGTGAGAAGCGAAATAAAC 59.814 43.478 16.29 0.00 0.00 2.01
38 39 3.432252 CACGGTGAGAAGCGAAATAAACT 59.568 43.478 0.74 0.00 0.00 2.66
39 40 3.678548 ACGGTGAGAAGCGAAATAAACTC 59.321 43.478 4.15 0.00 0.00 3.01
40 41 3.062234 CGGTGAGAAGCGAAATAAACTCC 59.938 47.826 0.00 0.00 0.00 3.85
41 42 4.000988 GGTGAGAAGCGAAATAAACTCCA 58.999 43.478 0.00 0.00 0.00 3.86
42 43 4.142881 GGTGAGAAGCGAAATAAACTCCAC 60.143 45.833 0.00 0.00 0.00 4.02
43 44 4.451096 GTGAGAAGCGAAATAAACTCCACA 59.549 41.667 0.00 0.00 0.00 4.17
44 45 4.690748 TGAGAAGCGAAATAAACTCCACAG 59.309 41.667 0.00 0.00 0.00 3.66
45 46 4.003648 AGAAGCGAAATAAACTCCACAGG 58.996 43.478 0.00 0.00 0.00 4.00
46 47 3.695830 AGCGAAATAAACTCCACAGGA 57.304 42.857 0.00 0.00 0.00 3.86
47 48 4.015872 AGCGAAATAAACTCCACAGGAA 57.984 40.909 0.00 0.00 0.00 3.36
48 49 3.751698 AGCGAAATAAACTCCACAGGAAC 59.248 43.478 0.00 0.00 0.00 3.62
49 50 3.424433 GCGAAATAAACTCCACAGGAACG 60.424 47.826 0.00 0.00 0.00 3.95
50 51 3.424433 CGAAATAAACTCCACAGGAACGC 60.424 47.826 0.00 0.00 0.00 4.84
51 52 2.851263 ATAAACTCCACAGGAACGCA 57.149 45.000 0.00 0.00 0.00 5.24
52 53 1.873698 TAAACTCCACAGGAACGCAC 58.126 50.000 0.00 0.00 0.00 5.34
53 54 0.107410 AAACTCCACAGGAACGCACA 60.107 50.000 0.00 0.00 0.00 4.57
54 55 0.814010 AACTCCACAGGAACGCACAC 60.814 55.000 0.00 0.00 0.00 3.82
55 56 1.227527 CTCCACAGGAACGCACACA 60.228 57.895 0.00 0.00 0.00 3.72
56 57 0.603707 CTCCACAGGAACGCACACAT 60.604 55.000 0.00 0.00 0.00 3.21
57 58 0.179032 TCCACAGGAACGCACACATT 60.179 50.000 0.00 0.00 0.00 2.71
58 59 1.070914 TCCACAGGAACGCACACATTA 59.929 47.619 0.00 0.00 0.00 1.90
59 60 1.196808 CCACAGGAACGCACACATTAC 59.803 52.381 0.00 0.00 0.00 1.89
60 61 1.870402 CACAGGAACGCACACATTACA 59.130 47.619 0.00 0.00 0.00 2.41
61 62 2.289274 CACAGGAACGCACACATTACAA 59.711 45.455 0.00 0.00 0.00 2.41
62 63 2.289547 ACAGGAACGCACACATTACAAC 59.710 45.455 0.00 0.00 0.00 3.32
63 64 1.877443 AGGAACGCACACATTACAACC 59.123 47.619 0.00 0.00 0.00 3.77
64 65 1.604755 GGAACGCACACATTACAACCA 59.395 47.619 0.00 0.00 0.00 3.67
65 66 2.603652 GGAACGCACACATTACAACCAC 60.604 50.000 0.00 0.00 0.00 4.16
66 67 1.669604 ACGCACACATTACAACCACA 58.330 45.000 0.00 0.00 0.00 4.17
67 68 2.017782 ACGCACACATTACAACCACAA 58.982 42.857 0.00 0.00 0.00 3.33
68 69 2.423892 ACGCACACATTACAACCACAAA 59.576 40.909 0.00 0.00 0.00 2.83
69 70 3.042189 CGCACACATTACAACCACAAAG 58.958 45.455 0.00 0.00 0.00 2.77
70 71 2.794350 GCACACATTACAACCACAAAGC 59.206 45.455 0.00 0.00 0.00 3.51
71 72 3.736433 GCACACATTACAACCACAAAGCA 60.736 43.478 0.00 0.00 0.00 3.91
103 104 5.122239 TGTTCTAAATTGATCAACAGAGCCG 59.878 40.000 11.07 0.00 0.00 5.52
141 142 0.759346 ACCTCCGAAGAGCAACAACT 59.241 50.000 0.00 0.00 38.96 3.16
142 143 1.141053 ACCTCCGAAGAGCAACAACTT 59.859 47.619 0.00 0.00 38.96 2.66
144 145 3.181458 ACCTCCGAAGAGCAACAACTTTA 60.181 43.478 0.00 0.00 38.96 1.85
162 163 5.286438 ACTTTAAAAAGGCCAATCGTTGTC 58.714 37.500 5.01 0.00 40.31 3.18
163 164 4.920640 TTAAAAAGGCCAATCGTTGTCA 57.079 36.364 5.01 0.00 0.00 3.58
215 216 2.434843 TAGCAGGTGGATGGCGAGG 61.435 63.158 0.00 0.00 0.00 4.63
222 223 3.849951 GGATGGCGAGGCTCGGAA 61.850 66.667 35.03 10.91 40.84 4.30
235 236 2.530177 GCTCGGAAAGCCTAAAAATGC 58.470 47.619 0.00 0.00 45.92 3.56
237 238 2.491693 CTCGGAAAGCCTAAAAATGCCA 59.508 45.455 0.00 0.00 0.00 4.92
238 239 3.096092 TCGGAAAGCCTAAAAATGCCAT 58.904 40.909 0.00 0.00 0.00 4.40
239 240 3.130340 TCGGAAAGCCTAAAAATGCCATC 59.870 43.478 0.00 0.00 0.00 3.51
240 241 3.119173 CGGAAAGCCTAAAAATGCCATCA 60.119 43.478 0.00 0.00 0.00 3.07
271 272 2.545113 CCCGCAATAGTGTACATAGCGT 60.545 50.000 20.50 1.50 41.87 5.07
272 273 2.724690 CCGCAATAGTGTACATAGCGTC 59.275 50.000 20.50 1.37 41.87 5.19
273 274 2.724690 CGCAATAGTGTACATAGCGTCC 59.275 50.000 16.67 0.00 38.98 4.79
274 275 3.550233 CGCAATAGTGTACATAGCGTCCT 60.550 47.826 16.67 4.30 38.98 3.85
372 375 4.504916 CCCAGCAGAGGAGCGACG 62.505 72.222 0.00 0.00 40.15 5.12
374 377 4.127040 CAGCAGAGGAGCGACGCT 62.127 66.667 24.77 24.77 43.88 5.07
398 401 1.138036 CGCCGTCTACACCGATCAA 59.862 57.895 0.00 0.00 0.00 2.57
400 403 1.209128 GCCGTCTACACCGATCAATG 58.791 55.000 0.00 0.00 0.00 2.82
403 406 2.099263 CCGTCTACACCGATCAATGACT 59.901 50.000 0.34 0.00 0.00 3.41
417 420 7.144000 CGATCAATGACTGAATCTAGACATGA 58.856 38.462 0.00 0.00 37.67 3.07
437 441 3.244215 TGAGGACGTTCTTTGCTCAAGAT 60.244 43.478 0.00 0.00 41.42 2.40
448 452 9.130312 GTTCTTTGCTCAAGATATACCGTATAG 57.870 37.037 4.61 0.00 41.42 1.31
1234 1294 1.064906 TCGGAGGACGGTGAGATAGTT 60.065 52.381 0.00 0.00 44.45 2.24
1421 1499 2.014594 GCACTGGGCGCAGTATTAC 58.985 57.895 32.91 19.62 33.50 1.89
1427 1505 3.206150 CTGGGCGCAGTATTACAAAGAT 58.794 45.455 21.92 0.00 0.00 2.40
1560 1646 6.842676 TGTCTGATCTAGGTTAGAGCTATGA 58.157 40.000 0.00 0.00 41.58 2.15
1704 1790 6.255887 TCTGTTTCTCTTCTCGAAGTTTGAAC 59.744 38.462 6.56 8.11 39.38 3.18
1843 2004 6.751514 TGTTATGTAAATGTGGGACATCAC 57.248 37.500 0.00 0.00 44.52 3.06
1864 2025 5.924254 TCACTATGAGTTAACGTGGAGTTTG 59.076 40.000 9.70 0.00 43.86 2.93
1942 2103 0.839946 AGGGTGCTGTGACTTTCTGT 59.160 50.000 0.00 0.00 0.00 3.41
1963 2124 9.912634 TTCTGTTTCATTATTGTCAGAAAATCC 57.087 29.630 13.92 0.00 38.42 3.01
2095 2256 1.816835 CACAGCCTGCATTCAGTGAAT 59.183 47.619 12.75 12.75 38.66 2.57
2096 2257 3.011818 CACAGCCTGCATTCAGTGAATA 58.988 45.455 17.86 3.20 38.66 1.75
2097 2258 3.630769 CACAGCCTGCATTCAGTGAATAT 59.369 43.478 17.86 0.00 38.66 1.28
2392 3155 9.856488 CTAGTTCAGTGTTACAGCTAAAATCTA 57.144 33.333 0.00 0.00 0.00 1.98
2413 3176 1.726248 GTTGCAATTCGAATTGGGTGC 59.274 47.619 38.24 29.70 44.54 5.01
2527 3290 0.936764 CGCTATGTAGAGCCGCACTG 60.937 60.000 0.00 0.00 39.43 3.66
2539 3302 1.136774 CGCACTGTAGCTGCTACGA 59.863 57.895 28.76 18.95 39.58 3.43
3021 3784 5.665381 GGAAACGGAAATTTGCAAAATGA 57.335 34.783 17.19 0.00 30.81 2.57
3022 3785 6.054035 GGAAACGGAAATTTGCAAAATGAA 57.946 33.333 17.19 0.00 30.81 2.57
3023 3786 6.490534 GGAAACGGAAATTTGCAAAATGAAA 58.509 32.000 17.19 0.00 30.81 2.69
3024 3787 6.969473 GGAAACGGAAATTTGCAAAATGAAAA 59.031 30.769 17.19 0.00 30.81 2.29
3025 3788 7.647318 GGAAACGGAAATTTGCAAAATGAAAAT 59.353 29.630 17.19 0.00 37.20 1.82
3026 3789 7.911362 AACGGAAATTTGCAAAATGAAAATG 57.089 28.000 17.19 4.44 34.61 2.32
3027 3790 6.437094 ACGGAAATTTGCAAAATGAAAATGG 58.563 32.000 17.19 2.62 34.61 3.16
3028 3791 6.261826 ACGGAAATTTGCAAAATGAAAATGGA 59.738 30.769 17.19 0.00 34.61 3.41
3029 3792 7.137426 CGGAAATTTGCAAAATGAAAATGGAA 58.863 30.769 17.19 0.00 34.61 3.53
3030 3793 7.646922 CGGAAATTTGCAAAATGAAAATGGAAA 59.353 29.630 17.19 0.00 34.61 3.13
3033 3796 8.819643 AATTTGCAAAATGAAAATGGAAATGG 57.180 26.923 17.19 0.00 42.02 3.16
3091 3854 2.092323 GAGGGAAAATGGAAACGGAGG 58.908 52.381 0.00 0.00 0.00 4.30
3302 4067 4.681025 CCAAACAATACACAATGACACAGC 59.319 41.667 0.00 0.00 0.00 4.40
3400 4165 6.810182 ACGGAATTGTCATGTACTACTACAAC 59.190 38.462 0.00 0.00 36.43 3.32
3527 4292 2.702592 AGTTCCGGTCAACAAACAGA 57.297 45.000 0.00 0.00 0.00 3.41
3580 4345 3.989167 CGTGTTTGTTTCCGGTAGTATCA 59.011 43.478 0.00 0.00 0.00 2.15
3592 4359 5.360714 TCCGGTAGTATCAGTTTCCGTATTT 59.639 40.000 0.00 0.00 36.84 1.40
3669 4437 0.981183 TGATAGCACCCAGTTCCGTT 59.019 50.000 0.00 0.00 0.00 4.44
3675 4443 1.018910 CACCCAGTTCCGTTCGTTTT 58.981 50.000 0.00 0.00 0.00 2.43
3763 4531 4.766373 TCCTGCACATGTTATGTTTGTGAT 59.234 37.500 0.00 0.00 42.70 3.06
3766 4534 5.228665 TGCACATGTTATGTTTGTGATTGG 58.771 37.500 0.00 0.00 42.70 3.16
6862 8040 3.438360 CGAAGTACGTTTAATAGGCCGT 58.562 45.455 0.00 0.00 37.22 5.68
6933 8485 5.606348 AGTTCAACCTTTTGGCATAACAA 57.394 34.783 0.00 0.00 45.59 2.83
6953 8505 5.009631 ACAAGCTATACACAAAGATTGCCA 58.990 37.500 0.62 0.00 41.61 4.92
7191 8892 7.960262 TGTGATTCACATATCTCTCTTGCTAT 58.040 34.615 15.41 0.00 39.62 2.97
7209 8910 1.234615 ATTCCTTGTGGGCACGTTCG 61.235 55.000 0.00 0.00 34.39 3.95
7228 8929 2.362397 TCGTCAGCTGAACAAGAGAAGT 59.638 45.455 20.19 0.00 0.00 3.01
7238 8939 3.550437 ACAAGAGAAGTTGCAGACACT 57.450 42.857 0.00 0.00 0.00 3.55
7421 9315 0.036732 TCGATCCAGTTGCTTGCCTT 59.963 50.000 0.00 0.00 0.00 4.35
7446 9340 1.495878 CTAGCTTCTACATGCGCCTG 58.504 55.000 11.39 11.39 0.00 4.85
7491 9385 0.108424 CAGCCAGCTCTCCTGTACAC 60.108 60.000 0.00 0.00 40.06 2.90
7499 9393 2.708051 CTCTCCTGTACACGTACCTCA 58.292 52.381 4.94 0.00 35.26 3.86
7501 9395 3.693807 TCTCCTGTACACGTACCTCAAT 58.306 45.455 4.94 0.00 35.26 2.57
7530 9425 3.131223 TCACGGGAGAATGAGAAGATCAC 59.869 47.826 0.00 0.00 41.91 3.06
7591 9487 4.082463 GGAACTGAACAAACACACTTCCAA 60.082 41.667 0.00 0.00 32.93 3.53
7602 9498 3.697542 ACACACTTCCAACCAAACCTAAC 59.302 43.478 0.00 0.00 0.00 2.34
7698 9594 4.582701 TTGCTATCCAAACAACCACTTG 57.417 40.909 0.00 0.00 0.00 3.16
7854 9755 3.737559 TGTTGGAATATTGGCTCCTGT 57.262 42.857 0.00 0.00 32.51 4.00
8105 10006 6.690957 TCAAAGTGCAATGAACTTTAGTTTCG 59.309 34.615 18.19 6.21 44.11 3.46
8446 10349 5.816258 GGTGACTTACCTTTCCTGCTTATAC 59.184 44.000 0.00 0.00 46.51 1.47
8449 10352 6.212791 TGACTTACCTTTCCTGCTTATACTGT 59.787 38.462 0.00 0.00 0.00 3.55
8470 10373 4.646492 TGTACTCCCTCCGTTCCTAAATAC 59.354 45.833 0.00 0.00 0.00 1.89
8527 10430 5.122869 TGCAGAGCAAAATGAGTGAATCTAC 59.877 40.000 0.00 0.00 34.76 2.59
8552 10455 7.837689 ACATATATACACCCATATGTAGTCCGT 59.162 37.037 1.24 0.00 43.30 4.69
9008 10921 2.577563 TGGATTGAAATGGCTCTGGAGA 59.422 45.455 1.35 0.00 0.00 3.71
9117 11032 7.509546 TGGTACATTTTTATTTTGCCCAGAAA 58.490 30.769 0.00 0.00 0.00 2.52
9131 11046 3.392882 CCCAGAAAATGTTGCACCTTTC 58.607 45.455 0.00 0.00 0.00 2.62
9145 11067 5.136828 TGCACCTTTCTTTCAATACCTTCA 58.863 37.500 0.00 0.00 0.00 3.02
9191 11113 0.177141 CCCTCTGCATTGGCCATTTG 59.823 55.000 6.09 9.27 40.13 2.32
9209 11131 6.208644 CCATTTGGTGACTTGTTAGTTCTTG 58.791 40.000 0.00 0.00 33.84 3.02
9250 11178 3.958018 TGATGCCGTACAAACCCTAATT 58.042 40.909 0.00 0.00 0.00 1.40
9252 11180 4.767928 TGATGCCGTACAAACCCTAATTTT 59.232 37.500 0.00 0.00 0.00 1.82
9262 11190 9.332502 GTACAAACCCTAATTTTGGAACATTTT 57.667 29.630 0.00 0.00 39.30 1.82
9263 11191 8.815565 ACAAACCCTAATTTTGGAACATTTTT 57.184 26.923 0.00 0.00 39.30 1.94
9295 11223 1.877443 GACGTGCTTTTTAGGGCTTGA 59.123 47.619 0.00 0.00 0.00 3.02
9318 11246 6.695278 TGATAGTTTTGTGCTACTTTTGCAAC 59.305 34.615 0.00 0.00 42.41 4.17
9353 11281 9.609346 AAAATGTACTCTACAACTACAAGTGTT 57.391 29.630 0.00 0.00 42.76 3.32
9354 11282 8.813643 AATGTACTCTACAACTACAAGTGTTC 57.186 34.615 0.00 0.00 42.76 3.18
9400 11331 3.669290 GCGCACAAAACATACATGCACTA 60.669 43.478 0.30 0.00 36.02 2.74
9458 11389 9.436957 ACAACTTTAGAAACATATCATTCTCGT 57.563 29.630 3.39 0.00 37.16 4.18
9459 11390 9.907576 CAACTTTAGAAACATATCATTCTCGTC 57.092 33.333 3.39 0.00 37.16 4.20
9460 11391 8.649973 ACTTTAGAAACATATCATTCTCGTCC 57.350 34.615 3.39 0.00 37.16 4.79
9461 11392 7.435488 ACTTTAGAAACATATCATTCTCGTCCG 59.565 37.037 3.39 0.00 37.16 4.79
9462 11393 4.051922 AGAAACATATCATTCTCGTCCGC 58.948 43.478 0.00 0.00 30.16 5.54
9463 11394 2.440539 ACATATCATTCTCGTCCGCC 57.559 50.000 0.00 0.00 0.00 6.13
9464 11395 1.335964 ACATATCATTCTCGTCCGCCG 60.336 52.381 0.00 0.00 38.13 6.46
9465 11396 0.388649 ATATCATTCTCGTCCGCCGC 60.389 55.000 0.00 0.00 36.19 6.53
9466 11397 2.416244 TATCATTCTCGTCCGCCGCC 62.416 60.000 0.00 0.00 36.19 6.13
9467 11398 4.812476 CATTCTCGTCCGCCGCCA 62.812 66.667 0.00 0.00 36.19 5.69
9468 11399 4.814294 ATTCTCGTCCGCCGCCAC 62.814 66.667 0.00 0.00 36.19 5.01
9478 11409 4.133796 GCCGCCACTTGCCCAATC 62.134 66.667 0.00 0.00 36.24 2.67
9479 11410 3.451894 CCGCCACTTGCCCAATCC 61.452 66.667 0.00 0.00 36.24 3.01
9480 11411 2.361610 CGCCACTTGCCCAATCCT 60.362 61.111 0.00 0.00 36.24 3.24
9481 11412 2.409870 CGCCACTTGCCCAATCCTC 61.410 63.158 0.00 0.00 36.24 3.71
9482 11413 1.000396 GCCACTTGCCCAATCCTCT 60.000 57.895 0.00 0.00 0.00 3.69
9483 11414 0.613012 GCCACTTGCCCAATCCTCTT 60.613 55.000 0.00 0.00 0.00 2.85
9484 11415 1.928868 CCACTTGCCCAATCCTCTTT 58.071 50.000 0.00 0.00 0.00 2.52
9485 11416 1.547372 CCACTTGCCCAATCCTCTTTG 59.453 52.381 0.00 0.00 0.00 2.77
9486 11417 2.517959 CACTTGCCCAATCCTCTTTGA 58.482 47.619 0.00 0.00 0.00 2.69
9487 11418 2.892852 CACTTGCCCAATCCTCTTTGAA 59.107 45.455 0.00 0.00 0.00 2.69
9488 11419 3.512724 CACTTGCCCAATCCTCTTTGAAT 59.487 43.478 0.00 0.00 0.00 2.57
9489 11420 3.766051 ACTTGCCCAATCCTCTTTGAATC 59.234 43.478 0.00 0.00 0.00 2.52
9490 11421 2.738743 TGCCCAATCCTCTTTGAATCC 58.261 47.619 0.00 0.00 0.00 3.01
9491 11422 1.678101 GCCCAATCCTCTTTGAATCCG 59.322 52.381 0.00 0.00 0.00 4.18
9492 11423 2.301346 CCCAATCCTCTTTGAATCCGG 58.699 52.381 0.00 0.00 0.00 5.14
9493 11424 1.678101 CCAATCCTCTTTGAATCCGGC 59.322 52.381 0.00 0.00 0.00 6.13
9494 11425 1.331756 CAATCCTCTTTGAATCCGGCG 59.668 52.381 0.00 0.00 0.00 6.46
9495 11426 0.815615 ATCCTCTTTGAATCCGGCGC 60.816 55.000 0.00 0.00 0.00 6.53
9496 11427 2.472909 CCTCTTTGAATCCGGCGCC 61.473 63.158 19.07 19.07 0.00 6.53
9497 11428 2.813179 CTCTTTGAATCCGGCGCCG 61.813 63.158 41.00 41.00 39.44 6.46
9516 11447 4.995058 TGCCTCCCCGTTCCCCTT 62.995 66.667 0.00 0.00 0.00 3.95
9517 11448 3.658422 GCCTCCCCGTTCCCCTTT 61.658 66.667 0.00 0.00 0.00 3.11
9518 11449 3.177291 CCTCCCCGTTCCCCTTTT 58.823 61.111 0.00 0.00 0.00 2.27
9519 11450 1.304134 CCTCCCCGTTCCCCTTTTG 60.304 63.158 0.00 0.00 0.00 2.44
9520 11451 1.765074 CTCCCCGTTCCCCTTTTGA 59.235 57.895 0.00 0.00 0.00 2.69
9521 11452 0.322546 CTCCCCGTTCCCCTTTTGAG 60.323 60.000 0.00 0.00 0.00 3.02
9522 11453 1.063654 TCCCCGTTCCCCTTTTGAGT 61.064 55.000 0.00 0.00 0.00 3.41
9523 11454 0.608308 CCCCGTTCCCCTTTTGAGTC 60.608 60.000 0.00 0.00 0.00 3.36
9524 11455 0.608308 CCCGTTCCCCTTTTGAGTCC 60.608 60.000 0.00 0.00 0.00 3.85
9525 11456 0.953960 CCGTTCCCCTTTTGAGTCCG 60.954 60.000 0.00 0.00 0.00 4.79
9526 11457 1.574702 CGTTCCCCTTTTGAGTCCGC 61.575 60.000 0.00 0.00 0.00 5.54
9527 11458 0.250770 GTTCCCCTTTTGAGTCCGCT 60.251 55.000 0.00 0.00 0.00 5.52
9528 11459 0.250727 TTCCCCTTTTGAGTCCGCTG 60.251 55.000 0.00 0.00 0.00 5.18
9529 11460 1.073199 CCCCTTTTGAGTCCGCTGT 59.927 57.895 0.00 0.00 0.00 4.40
9530 11461 0.955919 CCCCTTTTGAGTCCGCTGTC 60.956 60.000 0.00 0.00 0.00 3.51
9531 11462 0.035458 CCCTTTTGAGTCCGCTGTCT 59.965 55.000 0.00 0.00 0.00 3.41
9532 11463 1.433534 CCTTTTGAGTCCGCTGTCTC 58.566 55.000 0.00 0.00 0.00 3.36
9533 11464 1.001406 CCTTTTGAGTCCGCTGTCTCT 59.999 52.381 4.29 0.00 0.00 3.10
9534 11465 2.333014 CTTTTGAGTCCGCTGTCTCTC 58.667 52.381 4.29 0.00 0.00 3.20
9535 11466 0.603569 TTTGAGTCCGCTGTCTCTCC 59.396 55.000 4.29 0.00 0.00 3.71
9536 11467 0.539669 TTGAGTCCGCTGTCTCTCCA 60.540 55.000 4.29 0.00 0.00 3.86
9537 11468 0.539669 TGAGTCCGCTGTCTCTCCAA 60.540 55.000 4.29 0.00 0.00 3.53
9538 11469 0.820871 GAGTCCGCTGTCTCTCCAAT 59.179 55.000 0.00 0.00 0.00 3.16
9539 11470 0.820871 AGTCCGCTGTCTCTCCAATC 59.179 55.000 0.00 0.00 0.00 2.67
9540 11471 0.179097 GTCCGCTGTCTCTCCAATCC 60.179 60.000 0.00 0.00 0.00 3.01
9541 11472 1.144936 CCGCTGTCTCTCCAATCCC 59.855 63.158 0.00 0.00 0.00 3.85
9542 11473 1.144936 CGCTGTCTCTCCAATCCCC 59.855 63.158 0.00 0.00 0.00 4.81
9543 11474 1.333636 CGCTGTCTCTCCAATCCCCT 61.334 60.000 0.00 0.00 0.00 4.79
9544 11475 0.915364 GCTGTCTCTCCAATCCCCTT 59.085 55.000 0.00 0.00 0.00 3.95
9545 11476 1.283321 GCTGTCTCTCCAATCCCCTTT 59.717 52.381 0.00 0.00 0.00 3.11
9546 11477 2.291217 GCTGTCTCTCCAATCCCCTTTT 60.291 50.000 0.00 0.00 0.00 2.27
9547 11478 3.350833 CTGTCTCTCCAATCCCCTTTTG 58.649 50.000 0.00 0.00 0.00 2.44
9548 11479 2.986019 TGTCTCTCCAATCCCCTTTTGA 59.014 45.455 0.00 0.00 0.00 2.69
9549 11480 3.009473 TGTCTCTCCAATCCCCTTTTGAG 59.991 47.826 0.00 0.00 0.00 3.02
9550 11481 3.009584 GTCTCTCCAATCCCCTTTTGAGT 59.990 47.826 0.00 0.00 0.00 3.41
9551 11482 3.264450 TCTCTCCAATCCCCTTTTGAGTC 59.736 47.826 0.00 0.00 0.00 3.36
9552 11483 3.260205 TCTCCAATCCCCTTTTGAGTCT 58.740 45.455 0.00 0.00 0.00 3.24
9553 11484 3.009473 TCTCCAATCCCCTTTTGAGTCTG 59.991 47.826 0.00 0.00 0.00 3.51
9554 11485 2.041620 TCCAATCCCCTTTTGAGTCTGG 59.958 50.000 0.00 0.00 0.00 3.86
9555 11486 1.821136 CAATCCCCTTTTGAGTCTGGC 59.179 52.381 0.00 0.00 0.00 4.85
9556 11487 1.075601 ATCCCCTTTTGAGTCTGGCA 58.924 50.000 0.00 0.00 0.00 4.92
9557 11488 0.110486 TCCCCTTTTGAGTCTGGCAC 59.890 55.000 0.00 0.00 0.00 5.01
9558 11489 0.895559 CCCCTTTTGAGTCTGGCACC 60.896 60.000 0.00 0.00 0.00 5.01
9559 11490 1.237285 CCCTTTTGAGTCTGGCACCG 61.237 60.000 0.00 0.00 0.00 4.94
9560 11491 1.237285 CCTTTTGAGTCTGGCACCGG 61.237 60.000 0.00 0.00 0.00 5.28
9561 11492 0.535102 CTTTTGAGTCTGGCACCGGT 60.535 55.000 0.00 0.00 0.00 5.28
9562 11493 0.817634 TTTTGAGTCTGGCACCGGTG 60.818 55.000 30.66 30.66 0.00 4.94
9572 11503 2.768344 CACCGGTGCCTCCCCTAT 60.768 66.667 24.02 0.00 0.00 2.57
9573 11504 2.446036 ACCGGTGCCTCCCCTATC 60.446 66.667 6.12 0.00 0.00 2.08
9574 11505 3.242291 CCGGTGCCTCCCCTATCC 61.242 72.222 0.00 0.00 0.00 2.59
9575 11506 3.242291 CGGTGCCTCCCCTATCCC 61.242 72.222 0.00 0.00 0.00 3.85
9576 11507 2.854523 GGTGCCTCCCCTATCCCC 60.855 72.222 0.00 0.00 0.00 4.81
9577 11508 2.290745 GTGCCTCCCCTATCCCCT 59.709 66.667 0.00 0.00 0.00 4.79
9578 11509 1.386057 GTGCCTCCCCTATCCCCTT 60.386 63.158 0.00 0.00 0.00 3.95
9579 11510 1.073706 TGCCTCCCCTATCCCCTTC 60.074 63.158 0.00 0.00 0.00 3.46
9580 11511 2.217745 GCCTCCCCTATCCCCTTCG 61.218 68.421 0.00 0.00 0.00 3.79
9581 11512 1.547248 CCTCCCCTATCCCCTTCGA 59.453 63.158 0.00 0.00 0.00 3.71
9582 11513 0.543174 CCTCCCCTATCCCCTTCGAG 60.543 65.000 0.00 0.00 0.00 4.04
9583 11514 0.188834 CTCCCCTATCCCCTTCGAGT 59.811 60.000 0.00 0.00 0.00 4.18
9584 11515 0.187851 TCCCCTATCCCCTTCGAGTC 59.812 60.000 0.00 0.00 0.00 3.36
9585 11516 0.832559 CCCCTATCCCCTTCGAGTCC 60.833 65.000 0.00 0.00 0.00 3.85
9586 11517 0.832559 CCCTATCCCCTTCGAGTCCC 60.833 65.000 0.00 0.00 0.00 4.46
9587 11518 0.188834 CCTATCCCCTTCGAGTCCCT 59.811 60.000 0.00 0.00 0.00 4.20
9588 11519 1.333177 CTATCCCCTTCGAGTCCCTG 58.667 60.000 0.00 0.00 0.00 4.45
9589 11520 0.635009 TATCCCCTTCGAGTCCCTGT 59.365 55.000 0.00 0.00 0.00 4.00
9590 11521 0.635009 ATCCCCTTCGAGTCCCTGTA 59.365 55.000 0.00 0.00 0.00 2.74
9591 11522 0.033405 TCCCCTTCGAGTCCCTGTAG 60.033 60.000 0.00 0.00 0.00 2.74
9592 11523 0.033405 CCCCTTCGAGTCCCTGTAGA 60.033 60.000 0.00 0.00 0.00 2.59
9593 11524 1.394618 CCCTTCGAGTCCCTGTAGAG 58.605 60.000 0.00 0.00 0.00 2.43
9594 11525 1.064611 CCCTTCGAGTCCCTGTAGAGA 60.065 57.143 0.00 0.00 0.00 3.10
9595 11526 2.423660 CCCTTCGAGTCCCTGTAGAGAT 60.424 54.545 0.00 0.00 0.00 2.75
9596 11527 2.882137 CCTTCGAGTCCCTGTAGAGATC 59.118 54.545 0.00 0.00 0.00 2.75
9597 11528 2.242047 TCGAGTCCCTGTAGAGATCG 57.758 55.000 0.00 0.00 0.00 3.69
9598 11529 1.202663 TCGAGTCCCTGTAGAGATCGG 60.203 57.143 0.00 0.00 0.00 4.18
9599 11530 1.202663 CGAGTCCCTGTAGAGATCGGA 60.203 57.143 0.00 0.00 0.00 4.55
9600 11531 2.500229 GAGTCCCTGTAGAGATCGGAG 58.500 57.143 0.00 0.00 0.00 4.63
9601 11532 0.955905 GTCCCTGTAGAGATCGGAGC 59.044 60.000 0.00 0.00 0.00 4.70
9602 11533 0.551396 TCCCTGTAGAGATCGGAGCA 59.449 55.000 0.00 0.00 0.00 4.26
9603 11534 0.958091 CCCTGTAGAGATCGGAGCAG 59.042 60.000 0.00 0.00 0.00 4.24
9604 11535 1.686355 CCTGTAGAGATCGGAGCAGT 58.314 55.000 0.00 0.00 0.00 4.40
9605 11536 1.336440 CCTGTAGAGATCGGAGCAGTG 59.664 57.143 0.00 0.00 0.00 3.66
9606 11537 1.336440 CTGTAGAGATCGGAGCAGTGG 59.664 57.143 0.00 0.00 0.00 4.00
9607 11538 0.671251 GTAGAGATCGGAGCAGTGGG 59.329 60.000 0.00 0.00 0.00 4.61
9608 11539 1.109920 TAGAGATCGGAGCAGTGGGC 61.110 60.000 0.00 0.00 45.30 5.36
9617 11548 2.507944 GCAGTGGGCGGATCTCAT 59.492 61.111 0.00 0.00 0.00 2.90
9618 11549 1.748403 GCAGTGGGCGGATCTCATA 59.252 57.895 0.00 0.00 0.00 2.15
9619 11550 0.320247 GCAGTGGGCGGATCTCATAG 60.320 60.000 0.00 0.00 0.00 2.23
9620 11551 1.332195 CAGTGGGCGGATCTCATAGA 58.668 55.000 0.00 0.00 0.00 1.98
9621 11552 1.898472 CAGTGGGCGGATCTCATAGAT 59.102 52.381 0.00 0.00 37.73 1.98
9622 11553 1.898472 AGTGGGCGGATCTCATAGATG 59.102 52.381 0.00 0.00 34.53 2.90
9623 11554 1.066573 GTGGGCGGATCTCATAGATGG 60.067 57.143 0.00 0.00 34.53 3.51
9624 11555 0.107945 GGGCGGATCTCATAGATGGC 60.108 60.000 0.00 0.00 34.53 4.40
9625 11556 0.107945 GGCGGATCTCATAGATGGCC 60.108 60.000 0.00 0.00 41.05 5.36
9626 11557 0.459237 GCGGATCTCATAGATGGCCG 60.459 60.000 10.93 10.93 42.00 6.13
9627 11558 0.174389 CGGATCTCATAGATGGCCGG 59.826 60.000 0.00 0.00 38.02 6.13
9628 11559 0.107945 GGATCTCATAGATGGCCGGC 60.108 60.000 21.18 21.18 34.53 6.13
9629 11560 0.459237 GATCTCATAGATGGCCGGCG 60.459 60.000 22.54 4.34 34.53 6.46
9630 11561 1.892819 ATCTCATAGATGGCCGGCGG 61.893 60.000 24.35 24.35 32.80 6.13
9641 11572 4.536687 CCGGCGGCGCTTGAAATC 62.537 66.667 32.30 12.04 0.00 2.17
9642 11573 4.536687 CGGCGGCGCTTGAAATCC 62.537 66.667 32.30 11.23 0.00 3.01
9643 11574 3.134127 GGCGGCGCTTGAAATCCT 61.134 61.111 32.30 0.00 0.00 3.24
9644 11575 2.100991 GCGGCGCTTGAAATCCTG 59.899 61.111 26.86 0.00 0.00 3.86
9645 11576 2.793946 CGGCGCTTGAAATCCTGG 59.206 61.111 7.64 0.00 0.00 4.45
9646 11577 2.764314 CGGCGCTTGAAATCCTGGG 61.764 63.158 7.64 0.00 0.00 4.45
9647 11578 2.491621 GCGCTTGAAATCCTGGGC 59.508 61.111 0.00 0.00 0.00 5.36
9648 11579 2.793946 CGCTTGAAATCCTGGGCG 59.206 61.111 0.00 0.00 36.89 6.13
9649 11580 2.764314 CGCTTGAAATCCTGGGCGG 61.764 63.158 3.75 0.00 39.12 6.13
9667 11598 2.645730 GGAGCTAGAGCATACCGATG 57.354 55.000 4.01 0.00 45.16 3.84
9668 11599 1.203523 GGAGCTAGAGCATACCGATGG 59.796 57.143 4.01 0.00 45.16 3.51
9669 11600 1.889829 GAGCTAGAGCATACCGATGGT 59.110 52.381 4.01 0.00 46.46 3.55
9670 11601 3.082548 GAGCTAGAGCATACCGATGGTA 58.917 50.000 4.01 0.00 43.83 3.25
9671 11602 3.497332 AGCTAGAGCATACCGATGGTAA 58.503 45.455 4.01 0.00 43.83 2.85
9672 11603 4.090090 AGCTAGAGCATACCGATGGTAAT 58.910 43.478 4.01 0.00 43.83 1.89
9673 11604 4.158764 AGCTAGAGCATACCGATGGTAATC 59.841 45.833 4.01 0.00 43.83 1.75
9674 11605 4.082190 GCTAGAGCATACCGATGGTAATCA 60.082 45.833 0.00 0.00 43.83 2.57
9675 11606 4.955811 AGAGCATACCGATGGTAATCAA 57.044 40.909 0.00 0.00 43.83 2.57
9676 11607 5.290493 AGAGCATACCGATGGTAATCAAA 57.710 39.130 0.00 0.00 43.83 2.69
9677 11608 5.869579 AGAGCATACCGATGGTAATCAAAT 58.130 37.500 0.00 0.00 43.83 2.32
9678 11609 5.934625 AGAGCATACCGATGGTAATCAAATC 59.065 40.000 0.00 0.00 43.83 2.17
9679 11610 5.003804 AGCATACCGATGGTAATCAAATCC 58.996 41.667 0.00 0.00 41.85 3.01
9680 11611 5.003804 GCATACCGATGGTAATCAAATCCT 58.996 41.667 0.00 0.00 41.85 3.24
9681 11612 5.473504 GCATACCGATGGTAATCAAATCCTT 59.526 40.000 0.00 0.00 41.85 3.36
9682 11613 6.016276 GCATACCGATGGTAATCAAATCCTTT 60.016 38.462 0.00 0.00 41.85 3.11
9683 11614 7.174253 GCATACCGATGGTAATCAAATCCTTTA 59.826 37.037 0.00 0.00 41.85 1.85
9684 11615 6.937436 ACCGATGGTAATCAAATCCTTTAC 57.063 37.500 0.00 0.00 32.11 2.01
9685 11616 5.826208 ACCGATGGTAATCAAATCCTTTACC 59.174 40.000 4.52 4.52 43.33 2.85
9686 11617 6.062095 CCGATGGTAATCAAATCCTTTACCT 58.938 40.000 11.22 0.00 43.40 3.08
9687 11618 6.017109 CCGATGGTAATCAAATCCTTTACCTG 60.017 42.308 11.22 3.41 43.40 4.00
9688 11619 6.017109 CGATGGTAATCAAATCCTTTACCTGG 60.017 42.308 11.22 0.00 43.40 4.45
9689 11620 6.395780 TGGTAATCAAATCCTTTACCTGGA 57.604 37.500 0.00 0.00 43.40 3.86
9690 11621 6.184789 TGGTAATCAAATCCTTTACCTGGAC 58.815 40.000 0.00 0.00 43.40 4.02
9691 11622 5.296035 GGTAATCAAATCCTTTACCTGGACG 59.704 44.000 0.00 0.00 41.00 4.79
9692 11623 4.569719 ATCAAATCCTTTACCTGGACGT 57.430 40.909 0.00 0.00 36.30 4.34
9693 11624 3.670625 TCAAATCCTTTACCTGGACGTG 58.329 45.455 0.00 0.00 36.30 4.49
9694 11625 2.747446 CAAATCCTTTACCTGGACGTGG 59.253 50.000 0.00 0.00 36.30 4.94
9695 11626 1.946984 ATCCTTTACCTGGACGTGGA 58.053 50.000 0.00 3.21 36.30 4.02
9696 11627 0.971386 TCCTTTACCTGGACGTGGAC 59.029 55.000 0.00 0.00 0.00 4.02
9697 11628 0.389426 CCTTTACCTGGACGTGGACG 60.389 60.000 0.00 0.00 46.33 4.79
9708 11639 2.385237 CGTGGACGTGAACCAAACA 58.615 52.632 0.00 0.00 39.22 2.83
9709 11640 0.727970 CGTGGACGTGAACCAAACAA 59.272 50.000 0.00 0.00 39.22 2.83
9710 11641 1.130749 CGTGGACGTGAACCAAACAAA 59.869 47.619 0.00 0.00 39.22 2.83
9711 11642 2.521996 GTGGACGTGAACCAAACAAAC 58.478 47.619 0.00 0.00 39.22 2.93
9712 11643 2.162809 GTGGACGTGAACCAAACAAACT 59.837 45.455 0.00 0.00 39.22 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.600107 GTGTTATGGTGGGAGCGGA 59.400 57.895 0.00 0.00 0.00 5.54
1 2 1.813753 CGTGTTATGGTGGGAGCGG 60.814 63.158 0.00 0.00 0.00 5.52
2 3 1.813753 CCGTGTTATGGTGGGAGCG 60.814 63.158 0.00 0.00 0.00 5.03
3 4 1.298667 ACCGTGTTATGGTGGGAGC 59.701 57.895 0.00 0.00 35.83 4.70
9 10 1.671850 CGCTTCTCACCGTGTTATGGT 60.672 52.381 0.00 0.00 38.21 3.55
10 11 0.999406 CGCTTCTCACCGTGTTATGG 59.001 55.000 0.00 0.00 0.00 2.74
11 12 1.990799 TCGCTTCTCACCGTGTTATG 58.009 50.000 0.00 0.00 0.00 1.90
12 13 2.736144 TTCGCTTCTCACCGTGTTAT 57.264 45.000 0.00 0.00 0.00 1.89
13 14 2.512485 TTTCGCTTCTCACCGTGTTA 57.488 45.000 0.00 0.00 0.00 2.41
14 15 1.878953 ATTTCGCTTCTCACCGTGTT 58.121 45.000 0.00 0.00 0.00 3.32
15 16 2.736144 TATTTCGCTTCTCACCGTGT 57.264 45.000 0.00 0.00 0.00 4.49
16 17 3.432252 AGTTTATTTCGCTTCTCACCGTG 59.568 43.478 0.00 0.00 0.00 4.94
17 18 3.660865 AGTTTATTTCGCTTCTCACCGT 58.339 40.909 0.00 0.00 0.00 4.83
18 19 3.062234 GGAGTTTATTTCGCTTCTCACCG 59.938 47.826 0.00 0.00 0.00 4.94
19 20 4.000988 TGGAGTTTATTTCGCTTCTCACC 58.999 43.478 0.00 0.00 0.00 4.02
20 21 4.451096 TGTGGAGTTTATTTCGCTTCTCAC 59.549 41.667 0.00 0.00 0.00 3.51
21 22 4.637276 TGTGGAGTTTATTTCGCTTCTCA 58.363 39.130 0.00 0.00 0.00 3.27
22 23 4.093556 CCTGTGGAGTTTATTTCGCTTCTC 59.906 45.833 0.00 0.00 0.00 2.87
23 24 4.003648 CCTGTGGAGTTTATTTCGCTTCT 58.996 43.478 0.00 0.00 0.00 2.85
24 25 4.000988 TCCTGTGGAGTTTATTTCGCTTC 58.999 43.478 0.00 0.00 0.00 3.86
25 26 4.015872 TCCTGTGGAGTTTATTTCGCTT 57.984 40.909 0.00 0.00 0.00 4.68
26 27 3.695830 TCCTGTGGAGTTTATTTCGCT 57.304 42.857 0.00 0.00 0.00 4.93
27 28 3.424433 CGTTCCTGTGGAGTTTATTTCGC 60.424 47.826 0.00 0.00 31.21 4.70
28 29 3.424433 GCGTTCCTGTGGAGTTTATTTCG 60.424 47.826 0.00 0.00 31.21 3.46
29 30 3.500680 TGCGTTCCTGTGGAGTTTATTTC 59.499 43.478 0.00 0.00 31.21 2.17
30 31 3.252458 GTGCGTTCCTGTGGAGTTTATTT 59.748 43.478 0.00 0.00 31.21 1.40
31 32 2.812011 GTGCGTTCCTGTGGAGTTTATT 59.188 45.455 0.00 0.00 31.21 1.40
32 33 2.224426 TGTGCGTTCCTGTGGAGTTTAT 60.224 45.455 0.00 0.00 31.21 1.40
33 34 1.139256 TGTGCGTTCCTGTGGAGTTTA 59.861 47.619 0.00 0.00 31.21 2.01
34 35 0.107410 TGTGCGTTCCTGTGGAGTTT 60.107 50.000 0.00 0.00 31.21 2.66
35 36 0.814010 GTGTGCGTTCCTGTGGAGTT 60.814 55.000 0.00 0.00 31.21 3.01
36 37 1.227556 GTGTGCGTTCCTGTGGAGT 60.228 57.895 0.00 0.00 31.21 3.85
37 38 0.603707 ATGTGTGCGTTCCTGTGGAG 60.604 55.000 0.00 0.00 31.21 3.86
38 39 0.179032 AATGTGTGCGTTCCTGTGGA 60.179 50.000 0.00 0.00 0.00 4.02
39 40 1.196808 GTAATGTGTGCGTTCCTGTGG 59.803 52.381 0.00 0.00 0.00 4.17
40 41 1.870402 TGTAATGTGTGCGTTCCTGTG 59.130 47.619 0.00 0.00 0.00 3.66
41 42 2.248280 TGTAATGTGTGCGTTCCTGT 57.752 45.000 0.00 0.00 0.00 4.00
42 43 2.350388 GGTTGTAATGTGTGCGTTCCTG 60.350 50.000 0.00 0.00 0.00 3.86
43 44 1.877443 GGTTGTAATGTGTGCGTTCCT 59.123 47.619 0.00 0.00 0.00 3.36
44 45 1.604755 TGGTTGTAATGTGTGCGTTCC 59.395 47.619 0.00 0.00 0.00 3.62
45 46 2.032302 TGTGGTTGTAATGTGTGCGTTC 59.968 45.455 0.00 0.00 0.00 3.95
46 47 2.017782 TGTGGTTGTAATGTGTGCGTT 58.982 42.857 0.00 0.00 0.00 4.84
47 48 1.669604 TGTGGTTGTAATGTGTGCGT 58.330 45.000 0.00 0.00 0.00 5.24
48 49 2.765108 TTGTGGTTGTAATGTGTGCG 57.235 45.000 0.00 0.00 0.00 5.34
49 50 2.794350 GCTTTGTGGTTGTAATGTGTGC 59.206 45.455 0.00 0.00 0.00 4.57
50 51 4.039151 TGCTTTGTGGTTGTAATGTGTG 57.961 40.909 0.00 0.00 0.00 3.82
51 52 4.727507 TTGCTTTGTGGTTGTAATGTGT 57.272 36.364 0.00 0.00 0.00 3.72
52 53 5.347342 TCTTTGCTTTGTGGTTGTAATGTG 58.653 37.500 0.00 0.00 0.00 3.21
53 54 5.590530 TCTTTGCTTTGTGGTTGTAATGT 57.409 34.783 0.00 0.00 0.00 2.71
54 55 4.445385 GCTCTTTGCTTTGTGGTTGTAATG 59.555 41.667 0.00 0.00 38.95 1.90
55 56 4.620982 GCTCTTTGCTTTGTGGTTGTAAT 58.379 39.130 0.00 0.00 38.95 1.89
56 57 4.040445 GCTCTTTGCTTTGTGGTTGTAA 57.960 40.909 0.00 0.00 38.95 2.41
57 58 3.708563 GCTCTTTGCTTTGTGGTTGTA 57.291 42.857 0.00 0.00 38.95 2.41
58 59 2.584492 GCTCTTTGCTTTGTGGTTGT 57.416 45.000 0.00 0.00 38.95 3.32
69 70 7.086376 TGATCAATTTAGAACAAGCTCTTTGC 58.914 34.615 0.00 0.00 40.59 3.68
70 71 8.909671 GTTGATCAATTTAGAACAAGCTCTTTG 58.090 33.333 12.12 0.00 42.68 2.77
71 72 8.632679 TGTTGATCAATTTAGAACAAGCTCTTT 58.367 29.630 12.12 0.00 32.07 2.52
78 79 6.348458 CGGCTCTGTTGATCAATTTAGAACAA 60.348 38.462 12.12 0.00 0.00 2.83
141 142 5.263968 TGACAACGATTGGCCTTTTTAAA 57.736 34.783 3.32 0.00 38.13 1.52
142 143 4.920640 TGACAACGATTGGCCTTTTTAA 57.079 36.364 3.32 0.00 38.13 1.52
144 145 3.453424 GTTGACAACGATTGGCCTTTTT 58.547 40.909 3.32 0.00 38.13 1.94
162 163 3.545124 TAGGGTGGCTGGTGCGTTG 62.545 63.158 0.00 0.00 40.82 4.10
163 164 3.246112 TAGGGTGGCTGGTGCGTT 61.246 61.111 0.00 0.00 40.82 4.84
222 223 5.395990 CCAAGATGATGGCATTTTTAGGCTT 60.396 40.000 0.00 0.00 34.11 4.35
227 228 5.105392 GGTGTCCAAGATGATGGCATTTTTA 60.105 40.000 0.00 0.00 40.46 1.52
228 229 4.322953 GGTGTCCAAGATGATGGCATTTTT 60.323 41.667 0.00 0.00 40.46 1.94
233 234 0.034186 GGGTGTCCAAGATGATGGCA 60.034 55.000 0.00 0.00 40.46 4.92
234 235 1.097547 CGGGTGTCCAAGATGATGGC 61.098 60.000 0.00 0.00 40.46 4.40
235 236 1.097547 GCGGGTGTCCAAGATGATGG 61.098 60.000 0.00 0.00 42.12 3.51
237 238 0.327924 TTGCGGGTGTCCAAGATGAT 59.672 50.000 0.00 0.00 0.00 2.45
238 239 0.327924 ATTGCGGGTGTCCAAGATGA 59.672 50.000 0.00 0.00 0.00 2.92
239 240 1.942657 CTATTGCGGGTGTCCAAGATG 59.057 52.381 0.00 0.00 0.00 2.90
240 241 1.559682 ACTATTGCGGGTGTCCAAGAT 59.440 47.619 0.00 0.00 0.00 2.40
274 275 3.678072 CGCGGTTCTATCTTGTTCTTCAA 59.322 43.478 0.00 0.00 34.61 2.69
324 327 0.401738 TTGGAGAGTTGGCTTGGAGG 59.598 55.000 0.00 0.00 0.00 4.30
359 362 4.121669 TCAGCGTCGCTCCTCTGC 62.122 66.667 18.76 0.00 36.40 4.26
372 375 2.102553 GTAGACGGCGTCCTCAGC 59.897 66.667 34.04 16.89 32.18 4.26
374 377 2.338015 GGTGTAGACGGCGTCCTCA 61.338 63.158 34.04 28.15 32.18 3.86
385 388 5.360999 AGATTCAGTCATTGATCGGTGTAGA 59.639 40.000 0.00 0.00 35.27 2.59
386 389 5.595885 AGATTCAGTCATTGATCGGTGTAG 58.404 41.667 0.00 0.00 35.27 2.74
398 401 5.009510 CGTCCTCATGTCTAGATTCAGTCAT 59.990 44.000 0.00 0.00 0.00 3.06
400 403 4.336993 ACGTCCTCATGTCTAGATTCAGTC 59.663 45.833 0.00 0.00 0.00 3.51
403 406 4.950475 AGAACGTCCTCATGTCTAGATTCA 59.050 41.667 0.00 0.00 0.00 2.57
417 420 2.910688 TCTTGAGCAAAGAACGTCCT 57.089 45.000 0.00 0.00 42.09 3.85
537 585 0.671251 CTGATAGACTGCTCCGGACC 59.329 60.000 0.00 0.00 0.00 4.46
984 1033 0.326048 CCATCTGTCACCCCTCCTCT 60.326 60.000 0.00 0.00 0.00 3.69
1234 1294 6.934645 AGAGCAACTTATAACTACACAAGCAA 59.065 34.615 0.00 0.00 0.00 3.91
1560 1646 1.078848 GATGCCACTTCTCACCGCT 60.079 57.895 0.00 0.00 0.00 5.52
1704 1790 5.815740 ACGGAGGCAGTACTTTTTGTATATG 59.184 40.000 0.00 0.00 33.23 1.78
1720 1806 2.817258 CAAGTATTTTGGAACGGAGGCA 59.183 45.455 0.00 0.00 0.00 4.75
1843 2004 4.688879 TGCAAACTCCACGTTAACTCATAG 59.311 41.667 3.71 0.00 33.90 2.23
1942 2103 8.869109 AGGTTGGATTTTCTGACAATAATGAAA 58.131 29.630 0.00 0.00 0.00 2.69
2321 2521 8.690840 GGAAACAAAATAATGAAAACAGAGTCG 58.309 33.333 0.00 0.00 0.00 4.18
2392 3155 2.610232 GCACCCAATTCGAATTGCAACT 60.610 45.455 35.08 18.84 43.38 3.16
2413 3176 1.096967 TTCACCACAGCACAGCACAG 61.097 55.000 0.00 0.00 0.00 3.66
2527 3290 6.423905 TGATATTTCCATTTCGTAGCAGCTAC 59.576 38.462 21.13 21.13 33.99 3.58
2986 3749 7.806149 ATTTCCGTTTCCGTTTTCATATTTC 57.194 32.000 0.00 0.00 0.00 2.17
2987 3750 8.491950 CAAATTTCCGTTTCCGTTTTCATATTT 58.508 29.630 0.00 0.00 0.00 1.40
2988 3751 7.359681 GCAAATTTCCGTTTCCGTTTTCATATT 60.360 33.333 0.00 0.00 0.00 1.28
2989 3752 6.090223 GCAAATTTCCGTTTCCGTTTTCATAT 59.910 34.615 0.00 0.00 0.00 1.78
2990 3753 5.402867 GCAAATTTCCGTTTCCGTTTTCATA 59.597 36.000 0.00 0.00 0.00 2.15
2991 3754 4.210328 GCAAATTTCCGTTTCCGTTTTCAT 59.790 37.500 0.00 0.00 0.00 2.57
2992 3755 3.552294 GCAAATTTCCGTTTCCGTTTTCA 59.448 39.130 0.00 0.00 0.00 2.69
2993 3756 3.552294 TGCAAATTTCCGTTTCCGTTTTC 59.448 39.130 0.00 0.00 0.00 2.29
2994 3757 3.522553 TGCAAATTTCCGTTTCCGTTTT 58.477 36.364 0.00 0.00 0.00 2.43
2995 3758 3.166489 TGCAAATTTCCGTTTCCGTTT 57.834 38.095 0.00 0.00 0.00 3.60
2996 3759 2.873133 TGCAAATTTCCGTTTCCGTT 57.127 40.000 0.00 0.00 0.00 4.44
2997 3760 2.873133 TTGCAAATTTCCGTTTCCGT 57.127 40.000 0.00 0.00 0.00 4.69
2998 3761 4.210120 TCATTTTGCAAATTTCCGTTTCCG 59.790 37.500 13.65 0.00 0.00 4.30
2999 3762 5.665381 TCATTTTGCAAATTTCCGTTTCC 57.335 34.783 13.65 0.00 0.00 3.13
3000 3763 7.961325 TTTTCATTTTGCAAATTTCCGTTTC 57.039 28.000 13.65 0.00 0.00 2.78
3001 3764 7.434602 CCATTTTCATTTTGCAAATTTCCGTTT 59.565 29.630 13.65 0.00 0.00 3.60
3002 3765 6.916932 CCATTTTCATTTTGCAAATTTCCGTT 59.083 30.769 13.65 0.00 0.00 4.44
3003 3766 6.261826 TCCATTTTCATTTTGCAAATTTCCGT 59.738 30.769 13.65 0.00 0.00 4.69
3004 3767 6.666417 TCCATTTTCATTTTGCAAATTTCCG 58.334 32.000 13.65 0.37 0.00 4.30
3005 3768 8.868635 TTTCCATTTTCATTTTGCAAATTTCC 57.131 26.923 13.65 0.00 0.00 3.13
3007 3770 9.262358 CCATTTCCATTTTCATTTTGCAAATTT 57.738 25.926 13.65 0.68 0.00 1.82
3008 3771 8.639761 TCCATTTCCATTTTCATTTTGCAAATT 58.360 25.926 13.65 6.74 0.00 1.82
3009 3772 8.179509 TCCATTTCCATTTTCATTTTGCAAAT 57.820 26.923 13.65 0.39 0.00 2.32
3010 3773 7.255520 CCTCCATTTCCATTTTCATTTTGCAAA 60.256 33.333 8.05 8.05 0.00 3.68
3011 3774 6.207025 CCTCCATTTCCATTTTCATTTTGCAA 59.793 34.615 0.00 0.00 0.00 4.08
3012 3775 5.706369 CCTCCATTTCCATTTTCATTTTGCA 59.294 36.000 0.00 0.00 0.00 4.08
3013 3776 5.124297 CCCTCCATTTCCATTTTCATTTTGC 59.876 40.000 0.00 0.00 0.00 3.68
3014 3777 6.474630 TCCCTCCATTTCCATTTTCATTTTG 58.525 36.000 0.00 0.00 0.00 2.44
3015 3778 6.700845 TCCCTCCATTTCCATTTTCATTTT 57.299 33.333 0.00 0.00 0.00 1.82
3016 3779 6.444493 TCATCCCTCCATTTCCATTTTCATTT 59.556 34.615 0.00 0.00 0.00 2.32
3017 3780 5.965705 TCATCCCTCCATTTCCATTTTCATT 59.034 36.000 0.00 0.00 0.00 2.57
3018 3781 5.531198 TCATCCCTCCATTTCCATTTTCAT 58.469 37.500 0.00 0.00 0.00 2.57
3019 3782 4.945411 TCATCCCTCCATTTCCATTTTCA 58.055 39.130 0.00 0.00 0.00 2.69
3020 3783 5.937975 TTCATCCCTCCATTTCCATTTTC 57.062 39.130 0.00 0.00 0.00 2.29
3021 3784 6.700845 TTTTCATCCCTCCATTTCCATTTT 57.299 33.333 0.00 0.00 0.00 1.82
3022 3785 6.353255 CCATTTTCATCCCTCCATTTCCATTT 60.353 38.462 0.00 0.00 0.00 2.32
3023 3786 5.131475 CCATTTTCATCCCTCCATTTCCATT 59.869 40.000 0.00 0.00 0.00 3.16
3024 3787 4.657039 CCATTTTCATCCCTCCATTTCCAT 59.343 41.667 0.00 0.00 0.00 3.41
3025 3788 4.032310 CCATTTTCATCCCTCCATTTCCA 58.968 43.478 0.00 0.00 0.00 3.53
3026 3789 4.289245 TCCATTTTCATCCCTCCATTTCC 58.711 43.478 0.00 0.00 0.00 3.13
3027 3790 4.958581 ACTCCATTTTCATCCCTCCATTTC 59.041 41.667 0.00 0.00 0.00 2.17
3028 3791 4.713321 CACTCCATTTTCATCCCTCCATTT 59.287 41.667 0.00 0.00 0.00 2.32
3029 3792 4.284178 CACTCCATTTTCATCCCTCCATT 58.716 43.478 0.00 0.00 0.00 3.16
3030 3793 3.373438 CCACTCCATTTTCATCCCTCCAT 60.373 47.826 0.00 0.00 0.00 3.41
3033 3796 3.652057 TCCACTCCATTTTCATCCCTC 57.348 47.619 0.00 0.00 0.00 4.30
3091 3854 4.156373 TCCGTTTCCGTTTTCATATTTCCC 59.844 41.667 0.00 0.00 0.00 3.97
3272 4037 7.283354 TGTCATTGTGTATTGTTTGGTAGTTGA 59.717 33.333 0.00 0.00 0.00 3.18
3436 4201 6.698008 TGATGGAATTGTTAACATGGCTAG 57.302 37.500 9.56 0.00 0.00 3.42
3481 4246 5.117406 ACCCCCTTGAATCATAGAGAAAC 57.883 43.478 0.00 0.00 0.00 2.78
3527 4292 0.872388 GAGCGGACACGGAAACAAAT 59.128 50.000 0.00 0.00 41.36 2.32
3580 4345 3.253921 CCCCGAAAACAAATACGGAAACT 59.746 43.478 0.00 0.00 46.94 2.66
3592 4359 3.499157 CGAATACAGAAACCCCGAAAACA 59.501 43.478 0.00 0.00 0.00 2.83
3705 4473 1.139853 CAGATTTAGAAGCGCCTCCCT 59.860 52.381 2.29 0.00 0.00 4.20
4102 4891 7.962964 AAATACATCGAAGAGAAACAGAACA 57.037 32.000 0.00 0.00 43.63 3.18
4157 4946 7.833285 AGGTTTAACATAAGCAAAAGAAGGA 57.167 32.000 0.00 0.00 0.00 3.36
4472 5265 7.068103 CCATAACCTGCATAAACACCAAATAGA 59.932 37.037 0.00 0.00 0.00 1.98
4796 5607 4.752101 AGAAAGTTCTCAGGTTTCACATCG 59.248 41.667 0.00 0.00 33.43 3.84
5599 6436 8.044908 GGTGACATGGATAAGTCCTTAAAGTTA 58.955 37.037 0.00 0.00 45.32 2.24
6862 8040 6.061441 CCATGTAACCAGATTGGCACTTATA 58.939 40.000 0.00 0.00 42.67 0.98
6933 8485 3.623060 CGTGGCAATCTTTGTGTATAGCT 59.377 43.478 0.00 0.00 0.00 3.32
6953 8505 2.286365 ATGTGTCCAAATGGTTCCGT 57.714 45.000 0.00 0.00 36.34 4.69
7191 8892 1.890041 CGAACGTGCCCACAAGGAA 60.890 57.895 0.00 0.00 38.24 3.36
7209 8910 3.303659 GCAACTTCTCTTGTTCAGCTGAC 60.304 47.826 18.03 12.36 0.00 3.51
7228 8929 1.227527 CGGTCACCAGTGTCTGCAA 60.228 57.895 0.00 0.00 0.00 4.08
7337 9051 2.645192 TTGATCTCAGCGGCGGTGA 61.645 57.895 35.45 35.45 37.74 4.02
7339 9053 2.125512 GTTGATCTCAGCGGCGGT 60.126 61.111 5.44 5.44 0.00 5.68
7351 9065 3.201290 CGCTAATGCTCAAGGAGTTGAT 58.799 45.455 0.00 0.00 41.96 2.57
7421 9315 2.034685 CGCATGTAGAAGCTAGCTACCA 59.965 50.000 19.70 12.38 37.91 3.25
7491 9385 2.603110 CGTGACATTCCATTGAGGTACG 59.397 50.000 0.00 0.00 39.02 3.67
7499 9393 3.054434 TCATTCTCCCGTGACATTCCATT 60.054 43.478 0.00 0.00 0.00 3.16
7501 9395 1.905894 TCATTCTCCCGTGACATTCCA 59.094 47.619 0.00 0.00 0.00 3.53
7591 9487 7.981142 TCAGTTTATAGAAGGTTAGGTTTGGT 58.019 34.615 0.00 0.00 0.00 3.67
7698 9594 1.185618 GGGCAGAAAGGGGAAACACC 61.186 60.000 0.00 0.00 38.08 4.16
8105 10006 9.346725 GATTCACTTCACAATAAAACTGATTCC 57.653 33.333 0.00 0.00 0.00 3.01
8203 10104 5.335191 CGGAAAAAGGTTTCTTCAGATCCTG 60.335 44.000 0.00 0.00 42.45 3.86
8446 10349 2.431954 TAGGAACGGAGGGAGTACAG 57.568 55.000 0.00 0.00 0.00 2.74
8449 10352 4.870636 TGTATTTAGGAACGGAGGGAGTA 58.129 43.478 0.00 0.00 0.00 2.59
8470 10373 8.086522 CCATATTGCAATCTCTAAAAGGGATTG 58.913 37.037 16.86 20.40 45.07 2.67
8488 10391 3.188048 GCTCTGCATGTAGTCCATATTGC 59.812 47.826 10.80 0.00 30.71 3.56
8527 10430 8.234136 ACGGACTACATATGGGTGTATATATG 57.766 38.462 7.80 0.00 41.06 1.78
8537 10440 7.386851 AGATTTCAATACGGACTACATATGGG 58.613 38.462 7.80 2.11 0.00 4.00
8548 10451 8.117813 AGCCTTTTTAAAGATTTCAATACGGA 57.882 30.769 3.84 0.00 38.28 4.69
8570 10473 8.910351 ACTCCATCTGTTTCTAAATATAAGCC 57.090 34.615 0.00 0.00 0.00 4.35
8832 10736 3.502211 CGTCTATCACAGGTTTGCCTTTT 59.498 43.478 0.00 0.00 44.18 2.27
8849 10753 2.351447 CGAAGCAGAACCAAGTCGTCTA 60.351 50.000 0.00 0.00 0.00 2.59
9093 11008 7.971183 TTTCTGGGCAAAATAAAAATGTACC 57.029 32.000 0.00 0.00 0.00 3.34
9117 11032 6.041979 AGGTATTGAAAGAAAGGTGCAACATT 59.958 34.615 3.64 0.00 46.25 2.71
9131 11046 5.123979 GGCAGTAAGGTGAAGGTATTGAAAG 59.876 44.000 0.00 0.00 0.00 2.62
9145 11067 2.290323 GGAAGTCACATGGCAGTAAGGT 60.290 50.000 0.00 0.00 0.00 3.50
9191 11113 5.298347 AGCTACAAGAACTAACAAGTCACC 58.702 41.667 0.00 0.00 0.00 4.02
9222 11144 4.578928 GGGTTTGTACGGCATCAATCTAAT 59.421 41.667 0.00 0.00 0.00 1.73
9227 11149 2.507407 AGGGTTTGTACGGCATCAAT 57.493 45.000 0.00 0.00 0.00 2.57
9262 11190 2.645802 AGCACGTCCAAAGGTTGTAAA 58.354 42.857 0.00 0.00 0.00 2.01
9263 11191 2.335316 AGCACGTCCAAAGGTTGTAA 57.665 45.000 0.00 0.00 0.00 2.41
9264 11192 2.335316 AAGCACGTCCAAAGGTTGTA 57.665 45.000 0.00 0.00 0.00 2.41
9266 11194 2.577449 AAAAGCACGTCCAAAGGTTG 57.423 45.000 0.00 0.00 0.00 3.77
9267 11195 3.067601 CCTAAAAAGCACGTCCAAAGGTT 59.932 43.478 0.00 0.00 0.00 3.50
9268 11196 2.621526 CCTAAAAAGCACGTCCAAAGGT 59.378 45.455 0.00 0.00 0.00 3.50
9269 11197 2.030274 CCCTAAAAAGCACGTCCAAAGG 60.030 50.000 0.00 0.00 0.00 3.11
9270 11198 2.607038 GCCCTAAAAAGCACGTCCAAAG 60.607 50.000 0.00 0.00 0.00 2.77
9295 11223 6.697019 CAGTTGCAAAAGTAGCACAAAACTAT 59.303 34.615 0.00 0.00 42.54 2.12
9318 11246 7.815068 AGTTGTAGAGTACATTTTAGCTGACAG 59.185 37.037 0.00 0.00 38.68 3.51
9379 11310 2.932498 AGTGCATGTATGTTTTGTGCG 58.068 42.857 0.00 0.00 38.58 5.34
9432 11363 9.436957 ACGAGAATGATATGTTTCTAAAGTTGT 57.563 29.630 0.00 0.00 32.46 3.32
9433 11364 9.907576 GACGAGAATGATATGTTTCTAAAGTTG 57.092 33.333 0.00 0.00 32.46 3.16
9434 11365 9.099454 GGACGAGAATGATATGTTTCTAAAGTT 57.901 33.333 0.00 0.00 32.46 2.66
9435 11366 7.435488 CGGACGAGAATGATATGTTTCTAAAGT 59.565 37.037 0.00 0.49 32.46 2.66
9436 11367 7.567771 GCGGACGAGAATGATATGTTTCTAAAG 60.568 40.741 0.00 0.00 32.46 1.85
9437 11368 6.200286 GCGGACGAGAATGATATGTTTCTAAA 59.800 38.462 0.00 0.00 32.46 1.85
9438 11369 5.690409 GCGGACGAGAATGATATGTTTCTAA 59.310 40.000 0.00 0.00 32.46 2.10
9439 11370 5.220381 GCGGACGAGAATGATATGTTTCTA 58.780 41.667 0.00 0.00 32.46 2.10
9440 11371 4.051922 GCGGACGAGAATGATATGTTTCT 58.948 43.478 0.00 0.00 34.95 2.52
9441 11372 3.184581 GGCGGACGAGAATGATATGTTTC 59.815 47.826 0.00 0.00 0.00 2.78
9442 11373 3.131396 GGCGGACGAGAATGATATGTTT 58.869 45.455 0.00 0.00 0.00 2.83
9443 11374 2.755650 GGCGGACGAGAATGATATGTT 58.244 47.619 0.00 0.00 0.00 2.71
9444 11375 2.440539 GGCGGACGAGAATGATATGT 57.559 50.000 0.00 0.00 0.00 2.29
9461 11392 4.133796 GATTGGGCAAGTGGCGGC 62.134 66.667 0.00 0.00 46.16 6.53
9462 11393 3.451894 GGATTGGGCAAGTGGCGG 61.452 66.667 0.00 0.00 46.16 6.13
9463 11394 2.361610 AGGATTGGGCAAGTGGCG 60.362 61.111 0.00 0.00 46.16 5.69
9464 11395 0.613012 AAGAGGATTGGGCAAGTGGC 60.613 55.000 0.00 0.00 43.74 5.01
9465 11396 1.547372 CAAAGAGGATTGGGCAAGTGG 59.453 52.381 0.00 0.00 0.00 4.00
9466 11397 2.517959 TCAAAGAGGATTGGGCAAGTG 58.482 47.619 0.00 0.00 0.00 3.16
9467 11398 2.978156 TCAAAGAGGATTGGGCAAGT 57.022 45.000 0.00 0.00 0.00 3.16
9468 11399 3.131755 GGATTCAAAGAGGATTGGGCAAG 59.868 47.826 0.00 0.00 0.00 4.01
9469 11400 3.099141 GGATTCAAAGAGGATTGGGCAA 58.901 45.455 0.00 0.00 0.00 4.52
9470 11401 2.738743 GGATTCAAAGAGGATTGGGCA 58.261 47.619 0.00 0.00 0.00 5.36
9471 11402 1.678101 CGGATTCAAAGAGGATTGGGC 59.322 52.381 0.00 0.00 0.00 5.36
9472 11403 2.301346 CCGGATTCAAAGAGGATTGGG 58.699 52.381 0.00 0.00 0.00 4.12
9473 11404 1.678101 GCCGGATTCAAAGAGGATTGG 59.322 52.381 5.05 0.00 0.00 3.16
9474 11405 1.331756 CGCCGGATTCAAAGAGGATTG 59.668 52.381 5.05 0.00 0.00 2.67
9475 11406 1.668419 CGCCGGATTCAAAGAGGATT 58.332 50.000 5.05 0.00 0.00 3.01
9476 11407 0.815615 GCGCCGGATTCAAAGAGGAT 60.816 55.000 5.05 0.00 0.00 3.24
9477 11408 1.449601 GCGCCGGATTCAAAGAGGA 60.450 57.895 5.05 0.00 0.00 3.71
9478 11409 2.472909 GGCGCCGGATTCAAAGAGG 61.473 63.158 12.58 0.00 0.00 3.69
9479 11410 2.813179 CGGCGCCGGATTCAAAGAG 61.813 63.158 40.50 8.19 35.56 2.85
9480 11411 2.817834 CGGCGCCGGATTCAAAGA 60.818 61.111 40.50 0.00 35.56 2.52
9499 11430 4.995058 AAGGGGAACGGGGAGGCA 62.995 66.667 0.00 0.00 0.00 4.75
9500 11431 3.219788 AAAAGGGGAACGGGGAGGC 62.220 63.158 0.00 0.00 0.00 4.70
9501 11432 1.304134 CAAAAGGGGAACGGGGAGG 60.304 63.158 0.00 0.00 0.00 4.30
9502 11433 0.322546 CTCAAAAGGGGAACGGGGAG 60.323 60.000 0.00 0.00 0.00 4.30
9503 11434 1.063654 ACTCAAAAGGGGAACGGGGA 61.064 55.000 0.00 0.00 0.00 4.81
9504 11435 0.608308 GACTCAAAAGGGGAACGGGG 60.608 60.000 0.00 0.00 0.00 5.73
9505 11436 0.608308 GGACTCAAAAGGGGAACGGG 60.608 60.000 0.00 0.00 0.00 5.28
9506 11437 0.953960 CGGACTCAAAAGGGGAACGG 60.954 60.000 0.00 0.00 0.00 4.44
9507 11438 1.574702 GCGGACTCAAAAGGGGAACG 61.575 60.000 0.00 0.00 0.00 3.95
9508 11439 0.250770 AGCGGACTCAAAAGGGGAAC 60.251 55.000 0.00 0.00 0.00 3.62
9509 11440 0.250727 CAGCGGACTCAAAAGGGGAA 60.251 55.000 0.00 0.00 0.00 3.97
9510 11441 1.374947 CAGCGGACTCAAAAGGGGA 59.625 57.895 0.00 0.00 0.00 4.81
9511 11442 0.955919 GACAGCGGACTCAAAAGGGG 60.956 60.000 0.00 0.00 0.00 4.79
9512 11443 0.035458 AGACAGCGGACTCAAAAGGG 59.965 55.000 0.00 0.00 0.00 3.95
9513 11444 1.001406 AGAGACAGCGGACTCAAAAGG 59.999 52.381 17.07 0.00 38.13 3.11
9514 11445 2.333014 GAGAGACAGCGGACTCAAAAG 58.667 52.381 17.07 0.00 38.13 2.27
9515 11446 1.000955 GGAGAGACAGCGGACTCAAAA 59.999 52.381 17.07 0.00 38.13 2.44
9516 11447 0.603569 GGAGAGACAGCGGACTCAAA 59.396 55.000 17.07 0.00 38.13 2.69
9517 11448 0.539669 TGGAGAGACAGCGGACTCAA 60.540 55.000 17.07 2.16 38.13 3.02
9518 11449 0.539669 TTGGAGAGACAGCGGACTCA 60.540 55.000 17.07 0.00 38.13 3.41
9519 11450 0.820871 ATTGGAGAGACAGCGGACTC 59.179 55.000 8.14 8.14 36.29 3.36
9520 11451 0.820871 GATTGGAGAGACAGCGGACT 59.179 55.000 0.00 0.00 0.00 3.85
9521 11452 0.179097 GGATTGGAGAGACAGCGGAC 60.179 60.000 0.00 0.00 0.00 4.79
9522 11453 1.330655 GGGATTGGAGAGACAGCGGA 61.331 60.000 0.00 0.00 0.00 5.54
9523 11454 1.144936 GGGATTGGAGAGACAGCGG 59.855 63.158 0.00 0.00 0.00 5.52
9524 11455 1.144936 GGGGATTGGAGAGACAGCG 59.855 63.158 0.00 0.00 0.00 5.18
9525 11456 0.915364 AAGGGGATTGGAGAGACAGC 59.085 55.000 0.00 0.00 0.00 4.40
9526 11457 3.009473 TCAAAAGGGGATTGGAGAGACAG 59.991 47.826 0.00 0.00 0.00 3.51
9527 11458 2.986019 TCAAAAGGGGATTGGAGAGACA 59.014 45.455 0.00 0.00 0.00 3.41
9528 11459 3.009584 ACTCAAAAGGGGATTGGAGAGAC 59.990 47.826 0.00 0.00 31.08 3.36
9529 11460 3.260205 ACTCAAAAGGGGATTGGAGAGA 58.740 45.455 0.00 0.00 31.08 3.10
9530 11461 3.265479 AGACTCAAAAGGGGATTGGAGAG 59.735 47.826 0.00 0.00 31.08 3.20
9531 11462 3.009473 CAGACTCAAAAGGGGATTGGAGA 59.991 47.826 0.00 0.00 31.08 3.71
9532 11463 3.350833 CAGACTCAAAAGGGGATTGGAG 58.649 50.000 0.00 0.00 32.22 3.86
9533 11464 2.041620 CCAGACTCAAAAGGGGATTGGA 59.958 50.000 0.00 0.00 0.00 3.53
9534 11465 2.450476 CCAGACTCAAAAGGGGATTGG 58.550 52.381 0.00 0.00 0.00 3.16
9535 11466 1.821136 GCCAGACTCAAAAGGGGATTG 59.179 52.381 0.00 0.00 0.00 2.67
9536 11467 1.428912 TGCCAGACTCAAAAGGGGATT 59.571 47.619 0.00 0.00 0.00 3.01
9537 11468 1.075601 TGCCAGACTCAAAAGGGGAT 58.924 50.000 0.00 0.00 0.00 3.85
9538 11469 0.110486 GTGCCAGACTCAAAAGGGGA 59.890 55.000 0.00 0.00 0.00 4.81
9539 11470 0.895559 GGTGCCAGACTCAAAAGGGG 60.896 60.000 0.00 0.00 0.00 4.79
9540 11471 1.237285 CGGTGCCAGACTCAAAAGGG 61.237 60.000 0.00 0.00 0.00 3.95
9541 11472 1.237285 CCGGTGCCAGACTCAAAAGG 61.237 60.000 0.00 0.00 0.00 3.11
9542 11473 0.535102 ACCGGTGCCAGACTCAAAAG 60.535 55.000 6.12 0.00 0.00 2.27
9543 11474 0.817634 CACCGGTGCCAGACTCAAAA 60.818 55.000 24.02 0.00 0.00 2.44
9544 11475 1.227823 CACCGGTGCCAGACTCAAA 60.228 57.895 24.02 0.00 0.00 2.69
9545 11476 2.425592 CACCGGTGCCAGACTCAA 59.574 61.111 24.02 0.00 0.00 3.02
9555 11486 2.768344 ATAGGGGAGGCACCGGTG 60.768 66.667 30.66 30.66 40.11 4.94
9556 11487 2.446036 GATAGGGGAGGCACCGGT 60.446 66.667 0.00 0.00 40.11 5.28
9557 11488 3.242291 GGATAGGGGAGGCACCGG 61.242 72.222 0.00 0.00 40.11 5.28
9558 11489 3.242291 GGGATAGGGGAGGCACCG 61.242 72.222 0.00 0.00 40.11 4.94
9559 11490 2.854523 GGGGATAGGGGAGGCACC 60.855 72.222 0.00 0.00 38.08 5.01
9560 11491 1.386057 AAGGGGATAGGGGAGGCAC 60.386 63.158 0.00 0.00 0.00 5.01
9561 11492 1.073706 GAAGGGGATAGGGGAGGCA 60.074 63.158 0.00 0.00 0.00 4.75
9562 11493 2.217745 CGAAGGGGATAGGGGAGGC 61.218 68.421 0.00 0.00 0.00 4.70
9563 11494 0.543174 CTCGAAGGGGATAGGGGAGG 60.543 65.000 0.00 0.00 0.00 4.30
9564 11495 0.188834 ACTCGAAGGGGATAGGGGAG 59.811 60.000 0.00 0.00 0.00 4.30
9565 11496 0.187851 GACTCGAAGGGGATAGGGGA 59.812 60.000 0.00 0.00 0.00 4.81
9566 11497 0.832559 GGACTCGAAGGGGATAGGGG 60.833 65.000 0.00 0.00 0.00 4.79
9567 11498 0.832559 GGGACTCGAAGGGGATAGGG 60.833 65.000 0.00 0.00 0.00 3.53
9568 11499 0.188834 AGGGACTCGAAGGGGATAGG 59.811 60.000 0.00 0.00 0.00 2.57
9569 11500 1.333177 CAGGGACTCGAAGGGGATAG 58.667 60.000 0.00 0.00 34.60 2.08
9570 11501 0.635009 ACAGGGACTCGAAGGGGATA 59.365 55.000 0.00 0.00 34.60 2.59
9571 11502 0.635009 TACAGGGACTCGAAGGGGAT 59.365 55.000 0.00 0.00 34.60 3.85
9572 11503 0.033405 CTACAGGGACTCGAAGGGGA 60.033 60.000 0.00 0.00 34.60 4.81
9573 11504 0.033405 TCTACAGGGACTCGAAGGGG 60.033 60.000 0.00 0.00 34.60 4.79
9574 11505 1.064611 TCTCTACAGGGACTCGAAGGG 60.065 57.143 0.00 0.00 34.60 3.95
9575 11506 2.421751 TCTCTACAGGGACTCGAAGG 57.578 55.000 0.00 0.00 34.60 3.46
9576 11507 2.546368 CGATCTCTACAGGGACTCGAAG 59.454 54.545 5.53 0.00 34.60 3.79
9577 11508 2.562635 CGATCTCTACAGGGACTCGAA 58.437 52.381 5.53 0.00 34.60 3.71
9578 11509 1.202663 CCGATCTCTACAGGGACTCGA 60.203 57.143 10.55 0.00 34.60 4.04
9579 11510 1.202663 TCCGATCTCTACAGGGACTCG 60.203 57.143 0.00 4.81 34.60 4.18
9580 11511 2.500229 CTCCGATCTCTACAGGGACTC 58.500 57.143 0.00 0.00 34.60 3.36
9581 11512 1.477923 GCTCCGATCTCTACAGGGACT 60.478 57.143 0.00 0.00 43.88 3.85
9582 11513 0.955905 GCTCCGATCTCTACAGGGAC 59.044 60.000 0.00 0.00 0.00 4.46
9583 11514 0.551396 TGCTCCGATCTCTACAGGGA 59.449 55.000 0.00 0.00 0.00 4.20
9584 11515 0.958091 CTGCTCCGATCTCTACAGGG 59.042 60.000 0.00 0.00 0.00 4.45
9585 11516 1.336440 CACTGCTCCGATCTCTACAGG 59.664 57.143 7.35 0.00 0.00 4.00
9586 11517 1.336440 CCACTGCTCCGATCTCTACAG 59.664 57.143 0.00 0.00 0.00 2.74
9587 11518 1.393603 CCACTGCTCCGATCTCTACA 58.606 55.000 0.00 0.00 0.00 2.74
9588 11519 0.671251 CCCACTGCTCCGATCTCTAC 59.329 60.000 0.00 0.00 0.00 2.59
9589 11520 1.109920 GCCCACTGCTCCGATCTCTA 61.110 60.000 0.00 0.00 36.87 2.43
9590 11521 2.430610 GCCCACTGCTCCGATCTCT 61.431 63.158 0.00 0.00 36.87 3.10
9591 11522 2.107953 GCCCACTGCTCCGATCTC 59.892 66.667 0.00 0.00 36.87 2.75
9592 11523 3.842923 CGCCCACTGCTCCGATCT 61.843 66.667 0.00 0.00 38.05 2.75
9593 11524 4.899239 CCGCCCACTGCTCCGATC 62.899 72.222 0.00 0.00 38.05 3.69
9596 11527 4.899239 GATCCGCCCACTGCTCCG 62.899 72.222 0.00 0.00 38.05 4.63
9597 11528 3.453070 GAGATCCGCCCACTGCTCC 62.453 68.421 0.00 0.00 38.05 4.70
9598 11529 2.037620 ATGAGATCCGCCCACTGCTC 62.038 60.000 0.00 0.00 38.05 4.26
9599 11530 0.760567 TATGAGATCCGCCCACTGCT 60.761 55.000 0.00 0.00 38.05 4.24
9600 11531 0.320247 CTATGAGATCCGCCCACTGC 60.320 60.000 0.00 0.00 0.00 4.40
9601 11532 1.332195 TCTATGAGATCCGCCCACTG 58.668 55.000 0.00 0.00 0.00 3.66
9602 11533 1.898472 CATCTATGAGATCCGCCCACT 59.102 52.381 0.00 0.00 31.32 4.00
9603 11534 1.066573 CCATCTATGAGATCCGCCCAC 60.067 57.143 0.00 0.00 31.32 4.61
9604 11535 1.269958 CCATCTATGAGATCCGCCCA 58.730 55.000 0.00 0.00 31.32 5.36
9605 11536 0.107945 GCCATCTATGAGATCCGCCC 60.108 60.000 0.00 0.00 31.32 6.13
9606 11537 0.107945 GGCCATCTATGAGATCCGCC 60.108 60.000 0.00 7.86 38.96 6.13
9607 11538 0.459237 CGGCCATCTATGAGATCCGC 60.459 60.000 2.24 1.53 36.00 5.54
9608 11539 0.174389 CCGGCCATCTATGAGATCCG 59.826 60.000 2.24 8.79 40.06 4.18
9609 11540 0.107945 GCCGGCCATCTATGAGATCC 60.108 60.000 18.11 0.00 31.32 3.36
9610 11541 0.459237 CGCCGGCCATCTATGAGATC 60.459 60.000 23.46 0.00 31.32 2.75
9611 11542 1.593787 CGCCGGCCATCTATGAGAT 59.406 57.895 23.46 0.00 34.74 2.75
9612 11543 2.574018 CCGCCGGCCATCTATGAGA 61.574 63.158 23.46 0.00 0.00 3.27
9613 11544 2.047844 CCGCCGGCCATCTATGAG 60.048 66.667 23.46 2.52 0.00 2.90
9614 11545 4.314440 GCCGCCGGCCATCTATGA 62.314 66.667 23.46 0.00 44.06 2.15
9624 11555 4.536687 GATTTCAAGCGCCGCCGG 62.537 66.667 4.98 0.00 34.32 6.13
9625 11556 4.536687 GGATTTCAAGCGCCGCCG 62.537 66.667 4.98 0.00 37.57 6.46
9626 11557 3.134127 AGGATTTCAAGCGCCGCC 61.134 61.111 4.98 0.00 0.00 6.13
9627 11558 2.100991 CAGGATTTCAAGCGCCGC 59.899 61.111 2.29 0.00 0.00 6.53
9628 11559 2.764314 CCCAGGATTTCAAGCGCCG 61.764 63.158 2.29 0.00 0.00 6.46
9629 11560 3.068729 GCCCAGGATTTCAAGCGCC 62.069 63.158 2.29 0.00 0.00 6.53
9630 11561 2.491621 GCCCAGGATTTCAAGCGC 59.508 61.111 0.00 0.00 0.00 5.92
9631 11562 2.764314 CCGCCCAGGATTTCAAGCG 61.764 63.158 0.00 0.00 45.00 4.68
9632 11563 1.378514 TCCGCCCAGGATTTCAAGC 60.379 57.895 0.00 0.00 45.98 4.01
9641 11572 3.922640 GCTCTAGCTCCGCCCAGG 61.923 72.222 0.00 0.00 42.97 4.45
9642 11573 1.181741 TATGCTCTAGCTCCGCCCAG 61.182 60.000 3.26 0.00 42.66 4.45
9643 11574 1.152546 TATGCTCTAGCTCCGCCCA 60.153 57.895 3.26 0.00 42.66 5.36
9644 11575 1.290639 GTATGCTCTAGCTCCGCCC 59.709 63.158 3.26 0.00 42.66 6.13
9645 11576 1.290639 GGTATGCTCTAGCTCCGCC 59.709 63.158 3.26 0.00 42.66 6.13
9646 11577 1.081108 CGGTATGCTCTAGCTCCGC 60.081 63.158 15.92 0.00 40.66 5.54
9647 11578 1.135546 CATCGGTATGCTCTAGCTCCG 60.136 57.143 19.45 19.45 44.45 4.63
9648 11579 1.203523 CCATCGGTATGCTCTAGCTCC 59.796 57.143 3.26 3.01 42.66 4.70
9649 11580 1.889829 ACCATCGGTATGCTCTAGCTC 59.110 52.381 3.26 0.00 36.56 4.09
9650 11581 2.002505 ACCATCGGTATGCTCTAGCT 57.997 50.000 3.26 0.00 36.56 3.32
9651 11582 3.936372 TTACCATCGGTATGCTCTAGC 57.064 47.619 0.00 0.00 38.05 3.42
9652 11583 5.644977 TGATTACCATCGGTATGCTCTAG 57.355 43.478 0.00 0.00 38.05 2.43
9653 11584 6.413783 TTTGATTACCATCGGTATGCTCTA 57.586 37.500 0.00 0.00 38.05 2.43
9654 11585 4.955811 TTGATTACCATCGGTATGCTCT 57.044 40.909 0.00 0.00 38.05 4.09
9655 11586 5.122396 GGATTTGATTACCATCGGTATGCTC 59.878 44.000 0.00 0.00 38.05 4.26
9656 11587 5.003804 GGATTTGATTACCATCGGTATGCT 58.996 41.667 0.00 0.00 38.05 3.79
9657 11588 5.003804 AGGATTTGATTACCATCGGTATGC 58.996 41.667 0.00 0.00 38.05 3.14
9658 11589 7.510549 AAAGGATTTGATTACCATCGGTATG 57.489 36.000 0.00 0.00 35.84 2.39
9659 11590 7.664318 GGTAAAGGATTTGATTACCATCGGTAT 59.336 37.037 8.63 0.00 45.09 2.73
9660 11591 6.993902 GGTAAAGGATTTGATTACCATCGGTA 59.006 38.462 8.63 0.00 45.09 4.02
9661 11592 5.826208 GGTAAAGGATTTGATTACCATCGGT 59.174 40.000 8.63 0.00 45.09 4.69
9662 11593 6.313744 GGTAAAGGATTTGATTACCATCGG 57.686 41.667 8.63 0.00 45.09 4.18
9667 11598 5.296035 CGTCCAGGTAAAGGATTTGATTACC 59.704 44.000 5.93 5.93 45.76 2.85
9668 11599 5.878669 ACGTCCAGGTAAAGGATTTGATTAC 59.121 40.000 0.00 0.00 39.63 1.89
9669 11600 5.878116 CACGTCCAGGTAAAGGATTTGATTA 59.122 40.000 0.00 0.00 39.63 1.75
9670 11601 4.700213 CACGTCCAGGTAAAGGATTTGATT 59.300 41.667 0.00 0.00 39.63 2.57
9671 11602 4.261801 CACGTCCAGGTAAAGGATTTGAT 58.738 43.478 0.00 0.00 39.63 2.57
9672 11603 3.558321 CCACGTCCAGGTAAAGGATTTGA 60.558 47.826 0.00 0.00 39.63 2.69
9673 11604 2.747446 CCACGTCCAGGTAAAGGATTTG 59.253 50.000 0.00 0.00 39.63 2.32
9674 11605 2.640826 TCCACGTCCAGGTAAAGGATTT 59.359 45.455 0.00 0.00 43.42 2.17
9675 11606 2.027469 GTCCACGTCCAGGTAAAGGATT 60.027 50.000 0.00 0.00 37.52 3.01
9676 11607 1.553704 GTCCACGTCCAGGTAAAGGAT 59.446 52.381 0.00 0.00 37.52 3.24
9677 11608 0.971386 GTCCACGTCCAGGTAAAGGA 59.029 55.000 0.00 0.00 0.00 3.36
9678 11609 0.389426 CGTCCACGTCCAGGTAAAGG 60.389 60.000 0.00 0.00 34.11 3.11
9679 11610 3.117589 CGTCCACGTCCAGGTAAAG 57.882 57.895 0.00 0.00 34.11 1.85
9690 11621 0.727970 TTGTTTGGTTCACGTCCACG 59.272 50.000 0.00 0.00 46.33 4.94
9691 11622 2.162809 AGTTTGTTTGGTTCACGTCCAC 59.837 45.455 0.00 0.00 34.45 4.02
9692 11623 2.438411 AGTTTGTTTGGTTCACGTCCA 58.562 42.857 0.00 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.