Multiple sequence alignment - TraesCS3B01G159100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G159100 chr3B 100.000 6199 0 0 1 6199 154219609 154225807 0.000000e+00 11448.0
1 TraesCS3B01G159100 chr3B 86.618 822 75 24 4622 5424 154296045 154296850 0.000000e+00 876.0
2 TraesCS3B01G159100 chr3B 91.765 85 4 2 4222 4306 154295456 154295537 1.410000e-21 115.0
3 TraesCS3B01G159100 chr3D 91.840 3125 106 50 1 3044 103644461 103647517 0.000000e+00 4220.0
4 TraesCS3B01G159100 chr3D 91.411 1467 74 29 3894 5353 103648235 103649656 0.000000e+00 1964.0
5 TraesCS3B01G159100 chr3D 95.405 740 31 3 3061 3797 103647501 103648240 0.000000e+00 1175.0
6 TraesCS3B01G159100 chr3D 90.503 537 25 12 5642 6176 69653805 69653293 0.000000e+00 686.0
7 TraesCS3B01G159100 chr3D 89.671 213 17 2 5644 5853 468669962 468669752 3.680000e-67 267.0
8 TraesCS3B01G159100 chr3A 86.062 2095 119 70 1 1997 552616142 552614123 0.000000e+00 2091.0
9 TraesCS3B01G159100 chr3A 89.987 1578 97 34 3902 5451 552612370 552610826 0.000000e+00 1982.0
10 TraesCS3B01G159100 chr3A 91.555 1042 66 13 2024 3044 552614126 552613086 0.000000e+00 1417.0
11 TraesCS3B01G159100 chr3A 90.371 727 66 4 3061 3784 552613102 552612377 0.000000e+00 952.0
12 TraesCS3B01G159100 chr3A 87.687 536 21 10 5642 6176 749673785 749674276 3.220000e-162 582.0
13 TraesCS3B01G159100 chr3A 92.308 52 2 2 5463 5512 552564749 552564698 8.620000e-09 73.1
14 TraesCS3B01G159100 chr4D 91.078 538 23 9 5641 6176 51314505 51313991 0.000000e+00 704.0
15 TraesCS3B01G159100 chr1B 89.871 543 30 11 5636 6176 484225803 484225284 0.000000e+00 675.0
16 TraesCS3B01G159100 chr1B 89.687 543 31 11 5636 6176 484158808 484158289 0.000000e+00 669.0
17 TraesCS3B01G159100 chr1B 85.311 177 25 1 1027 1203 311419321 311419496 1.370000e-41 182.0
18 TraesCS3B01G159100 chr1B 91.176 68 2 4 3800 3866 560222251 560222187 8.560000e-14 89.8
19 TraesCS3B01G159100 chr5A 90.112 536 28 9 5642 6176 672737169 672736658 0.000000e+00 673.0
20 TraesCS3B01G159100 chr5A 85.185 189 25 2 1018 1203 39845492 39845680 2.280000e-44 191.0
21 TraesCS3B01G159100 chr5A 82.927 82 12 2 4885 4965 573650381 573650461 8.620000e-09 73.1
22 TraesCS3B01G159100 chr5A 100.000 32 0 0 1875 1906 39847552 39847583 6.710000e-05 60.2
23 TraesCS3B01G159100 chr4A 89.219 538 34 8 5640 6176 621696186 621696700 0.000000e+00 651.0
24 TraesCS3B01G159100 chr4A 90.769 65 4 2 3801 3865 568144161 568144099 1.110000e-12 86.1
25 TraesCS3B01G159100 chr5D 91.129 496 18 9 5682 6174 410199221 410198749 0.000000e+00 649.0
26 TraesCS3B01G159100 chr5D 85.185 189 25 2 1018 1203 50483374 50483562 2.280000e-44 191.0
27 TraesCS3B01G159100 chr5D 88.312 77 5 4 3792 3866 81756277 81756351 8.560000e-14 89.8
28 TraesCS3B01G159100 chr5D 100.000 32 0 0 1875 1906 50485451 50485482 6.710000e-05 60.2
29 TraesCS3B01G159100 chr5D 100.000 29 0 0 1875 1903 454416195 454416223 3.000000e-03 54.7
30 TraesCS3B01G159100 chrUn 90.588 425 16 10 5750 6173 478403273 478403674 5.470000e-150 542.0
31 TraesCS3B01G159100 chrUn 90.909 66 4 2 3801 3866 67360223 67360160 3.080000e-13 87.9
32 TraesCS3B01G159100 chr4B 88.085 470 33 7 5640 6109 419658209 419658655 2.540000e-148 536.0
33 TraesCS3B01G159100 chr7B 96.875 192 5 1 5638 5829 709496020 709495830 2.790000e-83 320.0
34 TraesCS3B01G159100 chr1D 86.441 177 23 1 1027 1203 217636254 217636429 6.340000e-45 193.0
35 TraesCS3B01G159100 chr1D 92.063 63 3 2 3803 3865 256553270 256553330 3.080000e-13 87.9
36 TraesCS3B01G159100 chr5B 84.656 189 26 2 1018 1203 53246743 53246931 1.060000e-42 185.0
37 TraesCS3B01G159100 chr5B 91.176 68 3 3 3800 3866 128350944 128351009 8.560000e-14 89.8
38 TraesCS3B01G159100 chr5B 84.146 82 11 2 4885 4965 556182238 556182318 1.850000e-10 78.7
39 TraesCS3B01G159100 chr5B 100.000 32 0 0 1875 1906 53248815 53248846 6.710000e-05 60.2
40 TraesCS3B01G159100 chr5B 100.000 29 0 0 1875 1903 556179276 556179304 3.000000e-03 54.7
41 TraesCS3B01G159100 chr1A 85.311 177 25 1 1027 1203 279733336 279733511 1.370000e-41 182.0
42 TraesCS3B01G159100 chr1A 92.424 66 3 2 3800 3865 561089542 561089479 6.620000e-15 93.5
43 TraesCS3B01G159100 chr2A 92.188 64 3 2 3802 3865 631790476 631790537 8.560000e-14 89.8
44 TraesCS3B01G159100 chr6D 90.769 65 4 2 3801 3865 412479694 412479756 1.110000e-12 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G159100 chr3B 154219609 154225807 6198 False 11448.0 11448 100.000000 1 6199 1 chr3B.!!$F1 6198
1 TraesCS3B01G159100 chr3B 154295456 154296850 1394 False 495.5 876 89.191500 4222 5424 2 chr3B.!!$F2 1202
2 TraesCS3B01G159100 chr3D 103644461 103649656 5195 False 2453.0 4220 92.885333 1 5353 3 chr3D.!!$F1 5352
3 TraesCS3B01G159100 chr3D 69653293 69653805 512 True 686.0 686 90.503000 5642 6176 1 chr3D.!!$R1 534
4 TraesCS3B01G159100 chr3A 552610826 552616142 5316 True 1610.5 2091 89.493750 1 5451 4 chr3A.!!$R2 5450
5 TraesCS3B01G159100 chr4D 51313991 51314505 514 True 704.0 704 91.078000 5641 6176 1 chr4D.!!$R1 535
6 TraesCS3B01G159100 chr1B 484225284 484225803 519 True 675.0 675 89.871000 5636 6176 1 chr1B.!!$R2 540
7 TraesCS3B01G159100 chr1B 484158289 484158808 519 True 669.0 669 89.687000 5636 6176 1 chr1B.!!$R1 540
8 TraesCS3B01G159100 chr5A 672736658 672737169 511 True 673.0 673 90.112000 5642 6176 1 chr5A.!!$R1 534
9 TraesCS3B01G159100 chr4A 621696186 621696700 514 False 651.0 651 89.219000 5640 6176 1 chr4A.!!$F1 536

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
377 411 0.030908 GTTGGCGGAGGATACGAGAG 59.969 60.000 0.00 0.0 46.39 3.20 F
871 929 0.107508 CATGCTAGTCCACCACCCAG 60.108 60.000 0.00 0.0 0.00 4.45 F
1996 2124 0.617935 GCCCCTTGCTTTCTCTCTCT 59.382 55.000 0.00 0.0 36.87 3.10 F
2458 2605 0.735978 TAGCGTGTTCATGCGTCAGG 60.736 55.000 10.68 0.0 35.87 3.86 F
2536 2683 1.037579 GCCCAAGTATGCCCCTTGTC 61.038 60.000 0.00 0.0 38.07 3.18 F
3241 3392 1.202604 TCCGTTAATTCATCCCCGAGC 60.203 52.381 0.00 0.0 0.00 5.03 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1393 1463 1.758514 GAGGAGGGCTCATCGTGGA 60.759 63.158 0.00 0.00 30.51 4.02 R
2718 2866 0.178995 TCCAAGGCTGTGCATGAACA 60.179 50.000 6.30 6.30 0.00 3.18 R
2901 3050 0.321671 GATAGCGCAAGGCCTGGATA 59.678 55.000 12.85 5.15 45.17 2.59 R
3908 4060 0.472352 TCTGGTCCGGTTAGGTGGTT 60.472 55.000 0.00 0.00 41.99 3.67 R
4360 4979 0.951558 AGGCAAACTGAAACGCGATT 59.048 45.000 15.93 7.45 0.00 3.34 R
5208 5841 0.179258 GCGACAACAAACGATCGTCC 60.179 55.000 22.98 4.31 36.93 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
116 125 1.504359 TGCGTAAACTAGTGTGTGGC 58.496 50.000 0.00 0.00 0.00 5.01
160 172 3.521947 ACTGCGGTACTGATTCTAACC 57.478 47.619 5.68 0.00 0.00 2.85
206 226 7.397761 GGTAGCTGTCCTAATAATCCTCACTAT 59.602 40.741 0.00 0.00 0.00 2.12
212 232 7.451877 TGTCCTAATAATCCTCACTATCTCCAC 59.548 40.741 0.00 0.00 0.00 4.02
235 262 7.095523 CCACATTGCTCCTGAATTTTAACAAAG 60.096 37.037 0.00 0.00 0.00 2.77
266 293 3.780294 TGTAGTAGGCCTGTTTGGATGAT 59.220 43.478 17.99 0.00 38.35 2.45
269 296 5.450818 AGTAGGCCTGTTTGGATGATTAA 57.549 39.130 17.99 0.00 38.35 1.40
284 311 6.547141 TGGATGATTAATTTCGCCAGATTCTT 59.453 34.615 0.00 0.00 0.00 2.52
292 319 1.893062 GCCAGATTCTTTGGGTGCC 59.107 57.895 0.00 0.00 36.19 5.01
310 343 4.439016 GGTGCCGAACTGTTTCTGTAAAAA 60.439 41.667 0.00 0.00 0.00 1.94
311 344 4.497966 GTGCCGAACTGTTTCTGTAAAAAC 59.502 41.667 0.00 0.00 39.16 2.43
352 386 7.122650 TGAAATCCCTACATTCTGAATGGTTTC 59.877 37.037 28.41 23.69 43.21 2.78
375 409 0.174845 TTGTTGGCGGAGGATACGAG 59.825 55.000 0.00 0.00 46.39 4.18
377 411 0.030908 GTTGGCGGAGGATACGAGAG 59.969 60.000 0.00 0.00 46.39 3.20
519 555 3.311596 GGGGGATACGAAACGAAATGAAG 59.688 47.826 0.00 0.00 37.60 3.02
531 571 1.678101 GAAATGAAGGATCCCTTGGCG 59.322 52.381 8.55 0.00 44.82 5.69
537 577 0.323451 AGGATCCCTTGGCGAAAACC 60.323 55.000 8.55 0.00 0.00 3.27
644 684 3.938253 GATCGACCGAGCGAGCGA 61.938 66.667 8.82 8.82 44.26 4.93
645 685 3.848391 GATCGACCGAGCGAGCGAG 62.848 68.421 11.24 0.00 44.26 5.03
652 692 2.505118 GAGCGAGCGAGCGAGTTT 60.505 61.111 1.41 0.00 43.00 2.66
655 695 1.225502 GCGAGCGAGCGAGTTTTTC 60.226 57.895 1.41 0.00 0.00 2.29
656 696 1.416434 CGAGCGAGCGAGTTTTTCC 59.584 57.895 0.00 0.00 0.00 3.13
657 697 1.788481 GAGCGAGCGAGTTTTTCCC 59.212 57.895 0.00 0.00 0.00 3.97
661 701 1.001706 GCGAGCGAGTTTTTCCCTTTT 60.002 47.619 0.00 0.00 0.00 2.27
674 714 7.665559 AGTTTTTCCCTTTTCTTTTGCTTCTTT 59.334 29.630 0.00 0.00 0.00 2.52
675 715 6.983474 TTTCCCTTTTCTTTTGCTTCTTTG 57.017 33.333 0.00 0.00 0.00 2.77
676 716 4.441792 TCCCTTTTCTTTTGCTTCTTTGC 58.558 39.130 0.00 0.00 0.00 3.68
677 717 3.561310 CCCTTTTCTTTTGCTTCTTTGCC 59.439 43.478 0.00 0.00 0.00 4.52
678 718 4.445453 CCTTTTCTTTTGCTTCTTTGCCT 58.555 39.130 0.00 0.00 0.00 4.75
679 719 4.877823 CCTTTTCTTTTGCTTCTTTGCCTT 59.122 37.500 0.00 0.00 0.00 4.35
783 841 4.305769 CAGAGCAGATTAAGCTAAGCGAT 58.694 43.478 0.00 0.00 43.58 4.58
784 842 4.749099 CAGAGCAGATTAAGCTAAGCGATT 59.251 41.667 0.00 0.00 43.58 3.34
792 850 2.923854 CTAAGCGATTGAGCGGCG 59.076 61.111 0.51 0.51 43.00 6.46
838 896 4.785453 GCGCTCCCTCCCACCTTG 62.785 72.222 0.00 0.00 0.00 3.61
869 927 0.392998 CACATGCTAGTCCACCACCC 60.393 60.000 0.00 0.00 0.00 4.61
871 929 0.107508 CATGCTAGTCCACCACCCAG 60.108 60.000 0.00 0.00 0.00 4.45
872 930 1.915078 ATGCTAGTCCACCACCCAGC 61.915 60.000 0.00 0.00 35.15 4.85
873 931 2.294078 GCTAGTCCACCACCCAGCT 61.294 63.158 0.00 0.00 32.87 4.24
874 932 1.901085 CTAGTCCACCACCCAGCTC 59.099 63.158 0.00 0.00 0.00 4.09
875 933 1.612442 TAGTCCACCACCCAGCTCC 60.612 63.158 0.00 0.00 0.00 4.70
876 934 4.035102 GTCCACCACCCAGCTCCC 62.035 72.222 0.00 0.00 0.00 4.30
898 956 2.614229 GGCCTTCTTCTTCACTCCACTC 60.614 54.545 0.00 0.00 0.00 3.51
899 957 2.614229 GCCTTCTTCTTCACTCCACTCC 60.614 54.545 0.00 0.00 0.00 3.85
900 958 2.353208 CCTTCTTCTTCACTCCACTCCG 60.353 54.545 0.00 0.00 0.00 4.63
950 1008 3.541713 GGCTGCGGGGTAGAGAGG 61.542 72.222 0.00 0.00 0.00 3.69
1383 1453 3.468140 GTACGCCCTCCTCCACCC 61.468 72.222 0.00 0.00 0.00 4.61
1418 1494 3.011517 GAGCCCTCCTCCCTTGCA 61.012 66.667 0.00 0.00 34.35 4.08
1615 1712 1.542492 CTTGCAGGCCATGTTCTCTT 58.458 50.000 5.01 0.00 0.00 2.85
1616 1713 2.618816 CCTTGCAGGCCATGTTCTCTTA 60.619 50.000 5.01 0.00 0.00 2.10
1684 1793 7.271223 GTGCGATATGTATGCATGGATTTTTAC 59.729 37.037 10.16 0.00 41.23 2.01
1818 1943 5.395214 GGTCTCTTTCCTCTCAATTCCTCTC 60.395 48.000 0.00 0.00 0.00 3.20
1839 1964 5.596361 TCTCTCTGAACTCTCAACTTCTTGT 59.404 40.000 0.00 0.00 0.00 3.16
1979 2107 1.315981 GGAGCCTGCCAAAGTAAGCC 61.316 60.000 0.00 0.00 0.00 4.35
1995 2123 3.167189 GCCCCTTGCTTTCTCTCTC 57.833 57.895 0.00 0.00 36.87 3.20
1996 2124 0.617935 GCCCCTTGCTTTCTCTCTCT 59.382 55.000 0.00 0.00 36.87 3.10
1997 2125 1.406751 GCCCCTTGCTTTCTCTCTCTC 60.407 57.143 0.00 0.00 36.87 3.20
1998 2126 2.187100 CCCCTTGCTTTCTCTCTCTCT 58.813 52.381 0.00 0.00 0.00 3.10
1999 2127 2.168313 CCCCTTGCTTTCTCTCTCTCTC 59.832 54.545 0.00 0.00 0.00 3.20
2000 2128 3.099141 CCCTTGCTTTCTCTCTCTCTCT 58.901 50.000 0.00 0.00 0.00 3.10
2001 2129 3.131046 CCCTTGCTTTCTCTCTCTCTCTC 59.869 52.174 0.00 0.00 0.00 3.20
2002 2130 4.019174 CCTTGCTTTCTCTCTCTCTCTCT 58.981 47.826 0.00 0.00 0.00 3.10
2003 2131 4.096984 CCTTGCTTTCTCTCTCTCTCTCTC 59.903 50.000 0.00 0.00 0.00 3.20
2004 2132 4.574674 TGCTTTCTCTCTCTCTCTCTCT 57.425 45.455 0.00 0.00 0.00 3.10
2005 2133 4.517285 TGCTTTCTCTCTCTCTCTCTCTC 58.483 47.826 0.00 0.00 0.00 3.20
2006 2134 4.225942 TGCTTTCTCTCTCTCTCTCTCTCT 59.774 45.833 0.00 0.00 0.00 3.10
2007 2135 4.813697 GCTTTCTCTCTCTCTCTCTCTCTC 59.186 50.000 0.00 0.00 0.00 3.20
2008 2136 5.396213 GCTTTCTCTCTCTCTCTCTCTCTCT 60.396 48.000 0.00 0.00 0.00 3.10
2009 2137 5.860941 TTCTCTCTCTCTCTCTCTCTCTC 57.139 47.826 0.00 0.00 0.00 3.20
2010 2138 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
2011 2139 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2012 2140 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2013 2141 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2014 2142 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2015 2143 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2016 2144 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2017 2145 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2018 2146 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2019 2147 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2020 2148 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2021 2149 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2022 2150 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2027 2155 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2032 2160 7.619698 TCTCTCTCTCTCTCTCTCTCTCTTTTA 59.380 40.741 0.00 0.00 0.00 1.52
2152 2280 1.144936 CCTCAAGGATCGGCCACTC 59.855 63.158 2.24 0.00 40.02 3.51
2458 2605 0.735978 TAGCGTGTTCATGCGTCAGG 60.736 55.000 10.68 0.00 35.87 3.86
2536 2683 1.037579 GCCCAAGTATGCCCCTTGTC 61.038 60.000 0.00 0.00 38.07 3.18
2545 2692 1.979155 GCCCCTTGTCCAGCCTTTC 60.979 63.158 0.00 0.00 0.00 2.62
2718 2866 7.013274 TCACAGAAATTTAGCAAGCTACTTTGT 59.987 33.333 0.40 1.51 0.00 2.83
2723 2871 6.633500 ATTTAGCAAGCTACTTTGTGTTCA 57.367 33.333 0.40 0.00 0.00 3.18
3040 3189 1.531423 CTCTTGAACAGCACAGGCAT 58.469 50.000 0.00 0.00 44.61 4.40
3044 3193 4.842574 TCTTGAACAGCACAGGCATATTA 58.157 39.130 0.00 0.00 44.61 0.98
3045 3194 4.635765 TCTTGAACAGCACAGGCATATTAC 59.364 41.667 0.00 0.00 44.61 1.89
3046 3195 4.220693 TGAACAGCACAGGCATATTACT 57.779 40.909 0.00 0.00 44.61 2.24
3047 3196 4.588899 TGAACAGCACAGGCATATTACTT 58.411 39.130 0.00 0.00 44.61 2.24
3048 3197 5.009631 TGAACAGCACAGGCATATTACTTT 58.990 37.500 0.00 0.00 44.61 2.66
3049 3198 5.123820 TGAACAGCACAGGCATATTACTTTC 59.876 40.000 0.00 0.00 44.61 2.62
3050 3199 4.588899 ACAGCACAGGCATATTACTTTCA 58.411 39.130 0.00 0.00 44.61 2.69
3051 3200 5.009631 ACAGCACAGGCATATTACTTTCAA 58.990 37.500 0.00 0.00 44.61 2.69
3052 3201 5.476599 ACAGCACAGGCATATTACTTTCAAA 59.523 36.000 0.00 0.00 44.61 2.69
3053 3202 6.015519 ACAGCACAGGCATATTACTTTCAAAA 60.016 34.615 0.00 0.00 44.61 2.44
3054 3203 6.867816 CAGCACAGGCATATTACTTTCAAAAA 59.132 34.615 0.00 0.00 44.61 1.94
3090 3239 4.455606 AGGCAGATTGTAATGCTCCTTAC 58.544 43.478 0.00 0.00 42.19 2.34
3223 3374 4.686554 GGCGTAGATGATGTTTGTATCTCC 59.313 45.833 0.00 0.00 33.51 3.71
3241 3392 1.202604 TCCGTTAATTCATCCCCGAGC 60.203 52.381 0.00 0.00 0.00 5.03
3280 3431 3.261580 CGCAACATTCAGTGATGGACTA 58.738 45.455 0.00 0.00 31.73 2.59
3295 3446 3.377573 TGGACTACCCATGGTTAGTACC 58.622 50.000 24.76 22.63 41.77 3.34
3405 3557 6.530913 CATTAACATCGACTCTGGTAATGG 57.469 41.667 20.37 8.10 44.77 3.16
3426 3578 1.763968 TGTAGGATGTCTCTCCACCG 58.236 55.000 0.00 0.00 37.81 4.94
3573 3725 2.241176 TGGCCAGGTTATACTCCCTTTG 59.759 50.000 0.00 0.00 0.00 2.77
3826 3978 5.675684 TTTTTGAAAGGAGGCAAAAGACT 57.324 34.783 0.00 0.00 42.71 3.24
3827 3979 5.675684 TTTTGAAAGGAGGCAAAAGACTT 57.324 34.783 0.00 0.00 38.60 3.01
3828 3980 4.654091 TTGAAAGGAGGCAAAAGACTTG 57.346 40.909 0.00 0.00 0.00 3.16
3829 3981 2.362077 TGAAAGGAGGCAAAAGACTTGC 59.638 45.455 0.78 0.78 44.22 4.01
3837 3989 3.648339 GCAAAAGACTTGCCTCATTCA 57.352 42.857 0.00 0.00 39.38 2.57
3838 3990 4.184079 GCAAAAGACTTGCCTCATTCAT 57.816 40.909 0.00 0.00 39.38 2.57
3839 3991 4.563061 GCAAAAGACTTGCCTCATTCATT 58.437 39.130 0.00 0.00 39.38 2.57
3840 3992 5.713025 GCAAAAGACTTGCCTCATTCATTA 58.287 37.500 0.00 0.00 39.38 1.90
3841 3993 6.158598 GCAAAAGACTTGCCTCATTCATTAA 58.841 36.000 0.00 0.00 39.38 1.40
3842 3994 6.815142 GCAAAAGACTTGCCTCATTCATTAAT 59.185 34.615 0.00 0.00 39.38 1.40
3843 3995 7.975616 GCAAAAGACTTGCCTCATTCATTAATA 59.024 33.333 0.00 0.00 39.38 0.98
3844 3996 9.859427 CAAAAGACTTGCCTCATTCATTAATAA 57.141 29.630 0.00 0.00 0.00 1.40
3847 3999 8.230472 AGACTTGCCTCATTCATTAATAAAGG 57.770 34.615 0.00 0.00 33.36 3.11
3848 4000 8.055181 AGACTTGCCTCATTCATTAATAAAGGA 58.945 33.333 4.98 0.00 32.54 3.36
3849 4001 8.230472 ACTTGCCTCATTCATTAATAAAGGAG 57.770 34.615 6.10 6.10 32.54 3.69
3850 4002 8.055181 ACTTGCCTCATTCATTAATAAAGGAGA 58.945 33.333 13.45 0.00 35.81 3.71
3851 4003 8.455903 TTGCCTCATTCATTAATAAAGGAGAG 57.544 34.615 13.45 6.02 35.81 3.20
3852 4004 7.000472 TGCCTCATTCATTAATAAAGGAGAGG 59.000 38.462 13.45 11.89 39.26 3.69
3853 4005 7.147320 TGCCTCATTCATTAATAAAGGAGAGGA 60.147 37.037 13.45 3.82 38.88 3.71
3854 4006 7.887495 GCCTCATTCATTAATAAAGGAGAGGAT 59.113 37.037 13.45 0.00 38.88 3.24
3867 4019 5.862678 AGGAGAGGATAACAGAGTTTAGC 57.137 43.478 0.00 0.00 0.00 3.09
3868 4020 5.273208 AGGAGAGGATAACAGAGTTTAGCA 58.727 41.667 0.00 0.00 0.00 3.49
3869 4021 5.902431 AGGAGAGGATAACAGAGTTTAGCAT 59.098 40.000 0.00 0.00 0.00 3.79
3870 4022 5.988561 GGAGAGGATAACAGAGTTTAGCATG 59.011 44.000 0.00 0.00 0.00 4.06
3871 4023 6.183360 GGAGAGGATAACAGAGTTTAGCATGA 60.183 42.308 0.00 0.00 0.00 3.07
3872 4024 6.815089 AGAGGATAACAGAGTTTAGCATGAG 58.185 40.000 0.00 0.00 0.00 2.90
3873 4025 6.382570 AGAGGATAACAGAGTTTAGCATGAGT 59.617 38.462 0.00 0.00 0.00 3.41
3874 4026 6.951971 AGGATAACAGAGTTTAGCATGAGTT 58.048 36.000 0.00 0.00 0.00 3.01
3875 4027 8.079211 AGGATAACAGAGTTTAGCATGAGTTA 57.921 34.615 0.00 0.00 0.00 2.24
3876 4028 7.982354 AGGATAACAGAGTTTAGCATGAGTTAC 59.018 37.037 0.00 0.00 0.00 2.50
3877 4029 7.764443 GGATAACAGAGTTTAGCATGAGTTACA 59.236 37.037 0.00 0.00 0.00 2.41
3878 4030 6.787085 AACAGAGTTTAGCATGAGTTACAC 57.213 37.500 0.00 0.00 0.00 2.90
3879 4031 6.102897 ACAGAGTTTAGCATGAGTTACACT 57.897 37.500 0.00 0.00 0.00 3.55
3880 4032 6.525629 ACAGAGTTTAGCATGAGTTACACTT 58.474 36.000 0.00 0.00 0.00 3.16
3881 4033 7.667557 ACAGAGTTTAGCATGAGTTACACTTA 58.332 34.615 0.00 0.00 0.00 2.24
3882 4034 8.314751 ACAGAGTTTAGCATGAGTTACACTTAT 58.685 33.333 0.00 0.00 0.00 1.73
3883 4035 8.598924 CAGAGTTTAGCATGAGTTACACTTATG 58.401 37.037 0.00 4.66 42.89 1.90
3891 4043 7.144722 CATGAGTTACACTTATGCAAAAGGA 57.855 36.000 0.00 0.00 35.81 3.36
3892 4044 6.801539 TGAGTTACACTTATGCAAAAGGAG 57.198 37.500 0.00 0.00 0.00 3.69
3893 4045 5.705441 TGAGTTACACTTATGCAAAAGGAGG 59.295 40.000 0.00 0.00 0.00 4.30
3894 4046 4.459337 AGTTACACTTATGCAAAAGGAGGC 59.541 41.667 0.00 0.00 0.00 4.70
3895 4047 2.875296 ACACTTATGCAAAAGGAGGCA 58.125 42.857 0.00 0.00 45.23 4.75
3896 4048 3.230134 ACACTTATGCAAAAGGAGGCAA 58.770 40.909 0.00 0.00 44.20 4.52
3897 4049 3.834231 ACACTTATGCAAAAGGAGGCAAT 59.166 39.130 0.00 0.00 44.20 3.56
3898 4050 5.016173 ACACTTATGCAAAAGGAGGCAATA 58.984 37.500 0.00 0.00 44.20 1.90
3899 4051 5.480073 ACACTTATGCAAAAGGAGGCAATAA 59.520 36.000 0.00 0.00 44.20 1.40
3900 4052 6.038356 CACTTATGCAAAAGGAGGCAATAAG 58.962 40.000 0.00 0.18 44.20 1.73
3901 4053 5.716703 ACTTATGCAAAAGGAGGCAATAAGT 59.283 36.000 0.00 0.84 44.20 2.24
3908 4060 8.589338 TGCAAAAGGAGGCAATAAGTTTATTTA 58.411 29.630 0.00 0.00 37.03 1.40
3921 4073 6.822667 AAGTTTATTTAACCACCTAACCGG 57.177 37.500 0.00 0.00 37.46 5.28
3949 4101 7.650504 CCAGATAACCTGATGCACATATTTTTG 59.349 37.037 0.00 0.00 45.78 2.44
4043 4196 3.553096 GGCAGATGTACAACGGGATAGAG 60.553 52.174 0.00 0.00 0.00 2.43
4100 4253 2.017049 GCACCCATAGACGCATCTTTT 58.983 47.619 0.00 0.00 36.29 2.27
4112 4265 3.129287 ACGCATCTTTTGGTGATGATTCC 59.871 43.478 7.77 0.00 42.68 3.01
4133 4286 2.564721 GCTGCTGCCTTCCGGTTTT 61.565 57.895 0.00 0.00 0.00 2.43
4148 4301 2.223249 CGGTTTTCGCATCATTCCGATT 60.223 45.455 0.00 0.00 38.96 3.34
4160 4313 3.634448 TCATTCCGATTGACTCTCCTCTC 59.366 47.826 0.00 0.00 0.00 3.20
4196 4349 8.722480 TTCACCTAAATATGAGACAACATCTG 57.278 34.615 0.00 0.00 38.00 2.90
4210 4363 4.142160 ACAACATCTGAGCTTGCGACTATA 60.142 41.667 0.00 0.00 0.00 1.31
4226 4380 9.477484 TTGCGACTATAAATTTAATCCTCTCTC 57.523 33.333 1.21 0.00 0.00 3.20
4227 4381 8.088981 TGCGACTATAAATTTAATCCTCTCTCC 58.911 37.037 1.21 0.00 0.00 3.71
4228 4382 7.546316 GCGACTATAAATTTAATCCTCTCTCCC 59.454 40.741 1.21 0.00 0.00 4.30
4285 4439 4.228567 TGCACGTTGGACCTCGCA 62.229 61.111 8.99 0.00 0.00 5.10
4360 4979 0.390340 GCTCGAAGGCTGTGATGACA 60.390 55.000 0.00 0.00 0.00 3.58
4387 5006 2.872858 GTTTCAGTTTGCCTTCGAGAGT 59.127 45.455 0.00 0.00 0.00 3.24
4462 5081 0.739462 CGTCGGTGCAAAGGATAGCA 60.739 55.000 0.00 0.00 38.65 3.49
4506 5125 1.924939 TGCCCCATGGAAGCTCTCA 60.925 57.895 22.50 4.76 0.00 3.27
4507 5126 1.284111 TGCCCCATGGAAGCTCTCAT 61.284 55.000 22.50 0.00 0.00 2.90
4511 5130 1.270199 CCCATGGAAGCTCTCATCTCG 60.270 57.143 15.22 0.00 0.00 4.04
4579 5198 3.731295 GAGCTACAGGTCTGTGCTC 57.269 57.895 24.66 24.66 46.41 4.26
4580 5199 3.372557 AGCTACAGGTCTGTGCTCT 57.627 52.632 13.32 5.17 44.63 4.09
4581 5200 0.894141 AGCTACAGGTCTGTGCTCTG 59.106 55.000 13.32 0.00 44.63 3.35
4754 5376 1.597854 GCAGCATACCAGCGCCATA 60.598 57.895 2.29 0.00 40.15 2.74
4800 5423 4.212716 GTTCCAGGGTTTTACTCACCTTT 58.787 43.478 0.00 0.00 34.36 3.11
4803 5426 4.079672 TCCAGGGTTTTACTCACCTTTGAA 60.080 41.667 0.00 0.00 34.36 2.69
4804 5427 4.037565 CCAGGGTTTTACTCACCTTTGAAC 59.962 45.833 0.00 0.00 34.36 3.18
4806 5429 4.887655 AGGGTTTTACTCACCTTTGAACAG 59.112 41.667 0.00 0.00 34.36 3.16
4807 5430 4.499188 GGGTTTTACTCACCTTTGAACAGC 60.499 45.833 0.00 0.00 34.36 4.40
4808 5431 4.338400 GGTTTTACTCACCTTTGAACAGCT 59.662 41.667 0.00 0.00 0.00 4.24
4809 5432 5.163550 GGTTTTACTCACCTTTGAACAGCTT 60.164 40.000 0.00 0.00 0.00 3.74
4812 5435 3.209410 ACTCACCTTTGAACAGCTTCTG 58.791 45.455 0.00 0.00 37.52 3.02
4838 5461 1.904144 GCACATGCTATGCTGTTGTG 58.096 50.000 12.69 12.69 40.08 3.33
4839 5462 1.468565 GCACATGCTATGCTGTTGTGG 60.469 52.381 16.13 5.36 40.08 4.17
4840 5463 1.814394 CACATGCTATGCTGTTGTGGT 59.186 47.619 0.00 0.00 34.06 4.16
4841 5464 3.009026 CACATGCTATGCTGTTGTGGTA 58.991 45.455 0.00 0.00 34.06 3.25
4842 5465 3.628942 CACATGCTATGCTGTTGTGGTAT 59.371 43.478 0.00 0.00 34.06 2.73
4843 5466 4.096833 CACATGCTATGCTGTTGTGGTATT 59.903 41.667 0.00 0.00 34.06 1.89
4847 5470 4.635765 TGCTATGCTGTTGTGGTATTTCTC 59.364 41.667 0.00 0.00 0.00 2.87
4848 5471 4.035675 GCTATGCTGTTGTGGTATTTCTCC 59.964 45.833 0.00 0.00 0.00 3.71
4849 5472 3.500448 TGCTGTTGTGGTATTTCTCCA 57.500 42.857 0.00 0.00 0.00 3.86
4857 5480 3.806949 TGGTATTTCTCCACTGGCTTT 57.193 42.857 0.00 0.00 0.00 3.51
4858 5481 3.420893 TGGTATTTCTCCACTGGCTTTG 58.579 45.455 0.00 0.00 0.00 2.77
4859 5482 3.073798 TGGTATTTCTCCACTGGCTTTGA 59.926 43.478 0.00 0.00 0.00 2.69
4860 5483 4.263905 TGGTATTTCTCCACTGGCTTTGAT 60.264 41.667 0.00 0.00 0.00 2.57
4861 5484 4.336713 GGTATTTCTCCACTGGCTTTGATC 59.663 45.833 0.00 0.00 0.00 2.92
4862 5485 3.795688 TTTCTCCACTGGCTTTGATCT 57.204 42.857 0.00 0.00 0.00 2.75
4863 5486 2.775911 TCTCCACTGGCTTTGATCTG 57.224 50.000 0.00 0.00 0.00 2.90
4864 5487 2.259917 TCTCCACTGGCTTTGATCTGA 58.740 47.619 0.00 0.00 0.00 3.27
4865 5488 2.027745 TCTCCACTGGCTTTGATCTGAC 60.028 50.000 0.00 0.00 0.00 3.51
4866 5489 1.081892 CCACTGGCTTTGATCTGACG 58.918 55.000 0.00 0.00 0.00 4.35
4867 5490 1.081892 CACTGGCTTTGATCTGACGG 58.918 55.000 0.00 0.00 0.00 4.79
4869 5492 1.699656 CTGGCTTTGATCTGACGGCG 61.700 60.000 4.80 4.80 0.00 6.46
4870 5493 1.741770 GGCTTTGATCTGACGGCGT 60.742 57.895 14.65 14.65 0.00 5.68
4871 5494 1.696832 GGCTTTGATCTGACGGCGTC 61.697 60.000 31.68 31.68 0.00 5.19
5243 5882 2.883253 GCCAAGTCTCGAGCGAGC 60.883 66.667 14.61 9.96 41.71 5.03
5247 5886 0.179153 CAAGTCTCGAGCGAGCATCA 60.179 55.000 14.61 0.00 41.71 3.07
5258 5897 0.813821 CGAGCATCAGACCTGAGTGA 59.186 55.000 5.90 0.00 43.61 3.41
5268 5908 5.141182 TCAGACCTGAGTGAGAGTAACTTT 58.859 41.667 0.00 0.00 34.14 2.66
5278 5918 3.071023 TGAGAGTAACTTTGTGGGACTGG 59.929 47.826 0.00 0.00 0.00 4.00
5279 5919 2.372172 AGAGTAACTTTGTGGGACTGGG 59.628 50.000 0.00 0.00 0.00 4.45
5280 5920 2.105993 GAGTAACTTTGTGGGACTGGGT 59.894 50.000 0.00 0.00 0.00 4.51
5282 5922 0.755327 AACTTTGTGGGACTGGGTGC 60.755 55.000 0.00 0.00 0.00 5.01
5283 5923 2.203280 TTTGTGGGACTGGGTGCG 60.203 61.111 0.00 0.00 0.00 5.34
5289 5929 4.947147 GGACTGGGTGCGGTGCAA 62.947 66.667 0.00 0.00 41.47 4.08
5291 5931 2.981560 GACTGGGTGCGGTGCAATG 61.982 63.158 0.00 0.00 41.47 2.82
5292 5932 2.985282 CTGGGTGCGGTGCAATGT 60.985 61.111 0.00 0.00 41.47 2.71
5309 5955 1.255882 TGTTTGGATGATGGTGGTGC 58.744 50.000 0.00 0.00 0.00 5.01
5365 6013 1.266989 GCTGTTTGCTTGGTCTGTACC 59.733 52.381 0.00 0.00 41.68 3.34
5366 6014 4.254729 GCTGTTTGCTTGGTCTGTACCG 62.255 54.545 0.00 0.00 43.14 4.02
5385 6033 4.149598 ACCGCTTACATTTCCTCCTTTTT 58.850 39.130 0.00 0.00 0.00 1.94
5386 6034 5.318630 ACCGCTTACATTTCCTCCTTTTTA 58.681 37.500 0.00 0.00 0.00 1.52
5387 6035 5.949952 ACCGCTTACATTTCCTCCTTTTTAT 59.050 36.000 0.00 0.00 0.00 1.40
5389 6037 6.459710 CCGCTTACATTTCCTCCTTTTTATCC 60.460 42.308 0.00 0.00 0.00 2.59
5451 6105 1.361668 GCTCACACCGCCACATGTAG 61.362 60.000 0.00 0.00 0.00 2.74
5452 6106 0.740868 CTCACACCGCCACATGTAGG 60.741 60.000 0.00 5.29 0.00 3.18
5453 6107 1.745115 CACACCGCCACATGTAGGG 60.745 63.158 15.71 9.70 0.00 3.53
5454 6108 1.916273 ACACCGCCACATGTAGGGA 60.916 57.895 9.87 0.00 0.00 4.20
5455 6109 1.271840 ACACCGCCACATGTAGGGAT 61.272 55.000 9.87 0.00 0.00 3.85
5456 6110 0.756294 CACCGCCACATGTAGGGATA 59.244 55.000 9.87 0.00 0.00 2.59
5457 6111 1.140052 CACCGCCACATGTAGGGATAA 59.860 52.381 9.87 0.00 0.00 1.75
5458 6112 1.140252 ACCGCCACATGTAGGGATAAC 59.860 52.381 9.87 0.00 0.00 1.89
5459 6113 1.140052 CCGCCACATGTAGGGATAACA 59.860 52.381 9.87 0.00 0.00 2.41
5460 6114 2.420827 CCGCCACATGTAGGGATAACAA 60.421 50.000 9.87 0.00 0.00 2.83
5461 6115 2.612212 CGCCACATGTAGGGATAACAAC 59.388 50.000 6.40 0.00 0.00 3.32
5462 6116 2.612212 GCCACATGTAGGGATAACAACG 59.388 50.000 6.40 0.00 0.00 4.10
5463 6117 3.680475 GCCACATGTAGGGATAACAACGA 60.680 47.826 6.40 0.00 0.00 3.85
5464 6118 4.509616 CCACATGTAGGGATAACAACGAA 58.490 43.478 0.00 0.00 0.00 3.85
5465 6119 4.570772 CCACATGTAGGGATAACAACGAAG 59.429 45.833 0.00 0.00 0.00 3.79
5466 6120 4.034048 CACATGTAGGGATAACAACGAAGC 59.966 45.833 0.00 0.00 0.00 3.86
5467 6121 4.081087 ACATGTAGGGATAACAACGAAGCT 60.081 41.667 0.00 0.00 0.00 3.74
5468 6122 3.857052 TGTAGGGATAACAACGAAGCTG 58.143 45.455 0.00 0.00 0.00 4.24
5469 6123 2.403252 AGGGATAACAACGAAGCTGG 57.597 50.000 0.00 0.00 0.00 4.85
5470 6124 1.628846 AGGGATAACAACGAAGCTGGT 59.371 47.619 0.00 0.00 0.00 4.00
5471 6125 1.737793 GGGATAACAACGAAGCTGGTG 59.262 52.381 0.00 0.00 0.00 4.17
5472 6126 1.737793 GGATAACAACGAAGCTGGTGG 59.262 52.381 0.00 0.00 0.00 4.61
5473 6127 2.614481 GGATAACAACGAAGCTGGTGGA 60.614 50.000 0.00 0.00 0.00 4.02
5474 6128 2.623878 TAACAACGAAGCTGGTGGAA 57.376 45.000 0.00 0.00 0.00 3.53
5475 6129 1.021968 AACAACGAAGCTGGTGGAAC 58.978 50.000 0.00 0.00 0.00 3.62
5476 6130 0.180406 ACAACGAAGCTGGTGGAACT 59.820 50.000 0.00 0.00 36.74 3.01
5477 6131 0.588252 CAACGAAGCTGGTGGAACTG 59.412 55.000 0.00 0.00 36.74 3.16
5478 6132 0.535102 AACGAAGCTGGTGGAACTGG 60.535 55.000 0.00 0.00 36.74 4.00
5479 6133 2.328099 CGAAGCTGGTGGAACTGGC 61.328 63.158 0.00 0.00 36.74 4.85
5480 6134 1.073897 GAAGCTGGTGGAACTGGCT 59.926 57.895 0.00 0.00 43.58 4.75
5481 6135 0.324943 GAAGCTGGTGGAACTGGCTA 59.675 55.000 0.00 0.00 41.74 3.93
5482 6136 0.036875 AAGCTGGTGGAACTGGCTAC 59.963 55.000 0.00 0.00 41.74 3.58
5483 6137 1.377333 GCTGGTGGAACTGGCTACC 60.377 63.158 0.00 0.00 39.62 3.18
5484 6138 2.066340 CTGGTGGAACTGGCTACCA 58.934 57.895 7.55 7.55 45.66 3.25
5488 6142 1.758592 TGGAACTGGCTACCACACC 59.241 57.895 0.00 0.00 0.00 4.16
5489 6143 0.766674 TGGAACTGGCTACCACACCT 60.767 55.000 0.00 0.00 0.00 4.00
5490 6144 0.321653 GGAACTGGCTACCACACCTG 60.322 60.000 0.00 0.00 0.00 4.00
5491 6145 0.396811 GAACTGGCTACCACACCTGT 59.603 55.000 0.00 0.00 39.52 4.00
5492 6146 0.843984 AACTGGCTACCACACCTGTT 59.156 50.000 0.00 0.00 41.59 3.16
5493 6147 0.843984 ACTGGCTACCACACCTGTTT 59.156 50.000 0.00 0.00 34.81 2.83
5494 6148 1.202770 ACTGGCTACCACACCTGTTTC 60.203 52.381 0.00 0.00 34.81 2.78
5495 6149 0.840617 TGGCTACCACACCTGTTTCA 59.159 50.000 0.00 0.00 0.00 2.69
5496 6150 1.202758 TGGCTACCACACCTGTTTCAG 60.203 52.381 0.00 0.00 0.00 3.02
5497 6151 1.202770 GGCTACCACACCTGTTTCAGT 60.203 52.381 0.00 0.00 0.00 3.41
5498 6152 1.873591 GCTACCACACCTGTTTCAGTG 59.126 52.381 0.00 0.00 0.00 3.66
5503 6157 1.334869 CACACCTGTTTCAGTGGAAGC 59.665 52.381 0.00 0.00 33.82 3.86
5504 6158 0.954452 CACCTGTTTCAGTGGAAGCC 59.046 55.000 0.00 0.00 33.74 4.35
5505 6159 0.550914 ACCTGTTTCAGTGGAAGCCA 59.449 50.000 0.00 0.00 33.74 4.75
5506 6160 1.064017 ACCTGTTTCAGTGGAAGCCAA 60.064 47.619 0.00 0.00 34.18 4.52
5507 6161 2.031120 CCTGTTTCAGTGGAAGCCAAA 58.969 47.619 0.00 0.00 34.18 3.28
5508 6162 2.430332 CCTGTTTCAGTGGAAGCCAAAA 59.570 45.455 0.00 0.00 34.18 2.44
5509 6163 3.447742 CTGTTTCAGTGGAAGCCAAAAC 58.552 45.455 0.00 0.00 34.32 2.43
5510 6164 2.159310 TGTTTCAGTGGAAGCCAAAACG 60.159 45.455 0.00 0.00 35.63 3.60
5511 6165 2.045561 TTCAGTGGAAGCCAAAACGA 57.954 45.000 0.00 0.00 34.18 3.85
5512 6166 2.270352 TCAGTGGAAGCCAAAACGAT 57.730 45.000 0.00 0.00 34.18 3.73
5513 6167 2.151202 TCAGTGGAAGCCAAAACGATC 58.849 47.619 0.00 0.00 34.18 3.69
5514 6168 1.135972 CAGTGGAAGCCAAAACGATCG 60.136 52.381 14.88 14.88 34.18 3.69
5515 6169 1.153353 GTGGAAGCCAAAACGATCGA 58.847 50.000 24.34 0.00 34.18 3.59
5516 6170 1.128692 GTGGAAGCCAAAACGATCGAG 59.871 52.381 24.34 8.30 34.18 4.04
5517 6171 0.727398 GGAAGCCAAAACGATCGAGG 59.273 55.000 24.34 17.64 0.00 4.63
5518 6172 0.097150 GAAGCCAAAACGATCGAGGC 59.903 55.000 24.34 25.46 45.54 4.70
5519 6173 2.399611 GCCAAAACGATCGAGGCG 59.600 61.111 24.34 7.23 35.42 5.52
5520 6174 2.388232 GCCAAAACGATCGAGGCGT 61.388 57.895 24.34 9.93 44.94 5.68
5525 6179 2.202570 ACGATCGAGGCGTTTCGG 60.203 61.111 24.34 0.00 39.18 4.30
5526 6180 2.202570 CGATCGAGGCGTTTCGGT 60.203 61.111 10.26 3.81 40.83 4.69
5527 6181 2.505498 CGATCGAGGCGTTTCGGTG 61.505 63.158 10.26 0.00 40.83 4.94
5528 6182 1.445582 GATCGAGGCGTTTCGGTGT 60.446 57.895 10.08 0.00 40.83 4.16
5529 6183 1.005394 ATCGAGGCGTTTCGGTGTT 60.005 52.632 10.08 0.00 40.83 3.32
5530 6184 0.601841 ATCGAGGCGTTTCGGTGTTT 60.602 50.000 10.08 0.00 40.83 2.83
5531 6185 1.083015 CGAGGCGTTTCGGTGTTTG 60.083 57.895 3.26 0.00 36.95 2.93
5532 6186 1.281656 GAGGCGTTTCGGTGTTTGG 59.718 57.895 0.00 0.00 0.00 3.28
5533 6187 2.125202 GAGGCGTTTCGGTGTTTGGG 62.125 60.000 0.00 0.00 0.00 4.12
5534 6188 2.354188 GCGTTTCGGTGTTTGGGC 60.354 61.111 0.00 0.00 0.00 5.36
5535 6189 2.841160 GCGTTTCGGTGTTTGGGCT 61.841 57.895 0.00 0.00 0.00 5.19
5536 6190 1.731093 CGTTTCGGTGTTTGGGCTT 59.269 52.632 0.00 0.00 0.00 4.35
5537 6191 0.945813 CGTTTCGGTGTTTGGGCTTA 59.054 50.000 0.00 0.00 0.00 3.09
5538 6192 1.538075 CGTTTCGGTGTTTGGGCTTAT 59.462 47.619 0.00 0.00 0.00 1.73
5539 6193 2.743126 CGTTTCGGTGTTTGGGCTTATA 59.257 45.455 0.00 0.00 0.00 0.98
5540 6194 3.188873 CGTTTCGGTGTTTGGGCTTATAA 59.811 43.478 0.00 0.00 0.00 0.98
5541 6195 4.142556 CGTTTCGGTGTTTGGGCTTATAAT 60.143 41.667 0.00 0.00 0.00 1.28
5542 6196 5.620429 CGTTTCGGTGTTTGGGCTTATAATT 60.620 40.000 0.00 0.00 0.00 1.40
5543 6197 4.974368 TCGGTGTTTGGGCTTATAATTG 57.026 40.909 0.00 0.00 0.00 2.32
5544 6198 4.337145 TCGGTGTTTGGGCTTATAATTGT 58.663 39.130 0.00 0.00 0.00 2.71
5545 6199 4.156922 TCGGTGTTTGGGCTTATAATTGTG 59.843 41.667 0.00 0.00 0.00 3.33
5546 6200 4.676723 CGGTGTTTGGGCTTATAATTGTGG 60.677 45.833 0.00 0.00 0.00 4.17
5547 6201 4.464597 GGTGTTTGGGCTTATAATTGTGGA 59.535 41.667 0.00 0.00 0.00 4.02
5548 6202 5.128663 GGTGTTTGGGCTTATAATTGTGGAT 59.871 40.000 0.00 0.00 0.00 3.41
5549 6203 6.322712 GGTGTTTGGGCTTATAATTGTGGATA 59.677 38.462 0.00 0.00 0.00 2.59
5550 6204 7.425606 GTGTTTGGGCTTATAATTGTGGATAG 58.574 38.462 0.00 0.00 0.00 2.08
5551 6205 7.284489 GTGTTTGGGCTTATAATTGTGGATAGA 59.716 37.037 0.00 0.00 0.00 1.98
5552 6206 7.836685 TGTTTGGGCTTATAATTGTGGATAGAA 59.163 33.333 0.00 0.00 0.00 2.10
5553 6207 8.860088 GTTTGGGCTTATAATTGTGGATAGAAT 58.140 33.333 0.00 0.00 0.00 2.40
5563 6217 7.472334 AATTGTGGATAGAATATTGATGCCC 57.528 36.000 0.00 0.00 0.00 5.36
5564 6218 4.578871 TGTGGATAGAATATTGATGCCCG 58.421 43.478 0.00 0.00 0.00 6.13
5565 6219 4.041567 TGTGGATAGAATATTGATGCCCGT 59.958 41.667 0.00 0.00 0.00 5.28
5566 6220 4.631813 GTGGATAGAATATTGATGCCCGTC 59.368 45.833 0.00 0.00 0.00 4.79
5567 6221 4.192317 GGATAGAATATTGATGCCCGTCC 58.808 47.826 0.00 0.00 0.00 4.79
5568 6222 4.323485 GGATAGAATATTGATGCCCGTCCA 60.323 45.833 0.00 0.00 0.00 4.02
5569 6223 2.851195 AGAATATTGATGCCCGTCCAC 58.149 47.619 0.00 0.00 0.00 4.02
5570 6224 1.531149 GAATATTGATGCCCGTCCACG 59.469 52.381 0.00 0.00 39.44 4.94
5571 6225 0.884704 ATATTGATGCCCGTCCACGC 60.885 55.000 0.00 0.00 38.18 5.34
5588 6242 2.885644 CGCACGCAGACGCCTTAT 60.886 61.111 0.00 0.00 45.53 1.73
5589 6243 1.587876 CGCACGCAGACGCCTTATA 60.588 57.895 0.00 0.00 45.53 0.98
5590 6244 1.540607 CGCACGCAGACGCCTTATAG 61.541 60.000 0.00 0.00 45.53 1.31
5591 6245 0.527817 GCACGCAGACGCCTTATAGT 60.528 55.000 0.00 0.00 45.53 2.12
5592 6246 1.922570 CACGCAGACGCCTTATAGTT 58.077 50.000 0.00 0.00 45.53 2.24
5593 6247 1.852895 CACGCAGACGCCTTATAGTTC 59.147 52.381 0.00 0.00 45.53 3.01
5594 6248 1.121240 CGCAGACGCCTTATAGTTCG 58.879 55.000 0.00 0.00 33.11 3.95
5595 6249 1.533338 CGCAGACGCCTTATAGTTCGT 60.533 52.381 0.00 0.00 37.92 3.85
5596 6250 1.852895 GCAGACGCCTTATAGTTCGTG 59.147 52.381 0.00 0.00 35.12 4.35
5597 6251 2.734492 GCAGACGCCTTATAGTTCGTGT 60.734 50.000 0.00 0.00 35.12 4.49
5598 6252 2.852413 CAGACGCCTTATAGTTCGTGTG 59.148 50.000 0.00 0.00 39.21 3.82
5599 6253 1.587034 GACGCCTTATAGTTCGTGTGC 59.413 52.381 0.00 0.00 35.12 4.57
5600 6254 1.203994 ACGCCTTATAGTTCGTGTGCT 59.796 47.619 0.00 0.00 33.59 4.40
5601 6255 1.588404 CGCCTTATAGTTCGTGTGCTG 59.412 52.381 0.00 0.00 0.00 4.41
5602 6256 1.327764 GCCTTATAGTTCGTGTGCTGC 59.672 52.381 0.00 0.00 0.00 5.25
5603 6257 1.933853 CCTTATAGTTCGTGTGCTGCC 59.066 52.381 0.00 0.00 0.00 4.85
5604 6258 1.588404 CTTATAGTTCGTGTGCTGCCG 59.412 52.381 0.00 0.00 0.00 5.69
5605 6259 0.804544 TATAGTTCGTGTGCTGCCGC 60.805 55.000 0.00 0.00 0.00 6.53
5606 6260 2.507110 ATAGTTCGTGTGCTGCCGCT 62.507 55.000 0.70 0.00 36.97 5.52
5607 6261 4.374702 GTTCGTGTGCTGCCGCTG 62.375 66.667 0.70 0.00 36.97 5.18
5622 6276 4.320456 CTGGGAGCTGCGTGGTGT 62.320 66.667 0.00 0.00 0.00 4.16
5623 6277 4.624364 TGGGAGCTGCGTGGTGTG 62.624 66.667 0.00 0.00 0.00 3.82
5626 6280 3.052082 GAGCTGCGTGGTGTGCAT 61.052 61.111 0.00 0.00 42.32 3.96
5627 6281 3.031964 GAGCTGCGTGGTGTGCATC 62.032 63.158 0.00 0.00 42.32 3.91
5628 6282 3.052082 GCTGCGTGGTGTGCATCT 61.052 61.111 0.00 0.00 42.32 2.90
5629 6283 2.865308 CTGCGTGGTGTGCATCTG 59.135 61.111 0.00 0.00 42.32 2.90
5630 6284 2.669229 TGCGTGGTGTGCATCTGG 60.669 61.111 0.00 0.00 37.44 3.86
5631 6285 3.434319 GCGTGGTGTGCATCTGGG 61.434 66.667 0.00 0.00 0.00 4.45
5632 6286 3.434319 CGTGGTGTGCATCTGGGC 61.434 66.667 0.00 0.00 0.00 5.36
5633 6287 3.434319 GTGGTGTGCATCTGGGCG 61.434 66.667 0.00 0.00 36.28 6.13
5638 6292 4.069869 GTGCATCTGGGCGCATAT 57.930 55.556 10.83 0.00 43.57 1.78
5654 6308 5.047943 GGCGCATATATACTAGATCGGGATT 60.048 44.000 10.83 0.00 0.00 3.01
5661 6315 0.389166 CTAGATCGGGATTGCGCCTC 60.389 60.000 4.18 0.89 0.00 4.70
5696 6350 1.543871 GGTCCAAACGCCAGGTTTAGA 60.544 52.381 0.00 0.00 46.90 2.10
5711 6365 6.460123 CCAGGTTTAGAATATGCATTCACACC 60.460 42.308 3.54 5.93 42.66 4.16
5780 6434 8.698210 ACAATCCACTCAGTATATACCGTAAAA 58.302 33.333 9.32 0.00 0.00 1.52
5830 6484 2.764010 TGTACTCAGCCATCAACCGTAT 59.236 45.455 0.00 0.00 0.00 3.06
5835 6489 4.100963 ACTCAGCCATCAACCGTATTATCA 59.899 41.667 0.00 0.00 0.00 2.15
5836 6490 5.029807 TCAGCCATCAACCGTATTATCAA 57.970 39.130 0.00 0.00 0.00 2.57
5837 6491 4.814234 TCAGCCATCAACCGTATTATCAAC 59.186 41.667 0.00 0.00 0.00 3.18
5838 6492 4.816385 CAGCCATCAACCGTATTATCAACT 59.184 41.667 0.00 0.00 0.00 3.16
5839 6493 5.296780 CAGCCATCAACCGTATTATCAACTT 59.703 40.000 0.00 0.00 0.00 2.66
5840 6494 5.885912 AGCCATCAACCGTATTATCAACTTT 59.114 36.000 0.00 0.00 0.00 2.66
5841 6495 7.011950 CAGCCATCAACCGTATTATCAACTTTA 59.988 37.037 0.00 0.00 0.00 1.85
5842 6496 7.554835 AGCCATCAACCGTATTATCAACTTTAA 59.445 33.333 0.00 0.00 0.00 1.52
5843 6497 7.642586 GCCATCAACCGTATTATCAACTTTAAC 59.357 37.037 0.00 0.00 0.00 2.01
5844 6498 8.670135 CCATCAACCGTATTATCAACTTTAACA 58.330 33.333 0.00 0.00 0.00 2.41
5915 6569 1.134371 CCTAAGTAAGCACTGGCCCTC 60.134 57.143 0.00 0.00 42.56 4.30
6032 6686 6.480524 TTTCACTCATTATTCTGTCAACCG 57.519 37.500 0.00 0.00 0.00 4.44
6176 6832 4.689612 AATATCACAGGCATAGGACGTT 57.310 40.909 0.00 0.00 0.00 3.99
6177 6833 5.801531 AATATCACAGGCATAGGACGTTA 57.198 39.130 0.00 0.00 0.00 3.18
6178 6834 3.735237 ATCACAGGCATAGGACGTTAG 57.265 47.619 0.00 0.00 0.00 2.34
6179 6835 2.453521 TCACAGGCATAGGACGTTAGT 58.546 47.619 0.00 0.00 0.00 2.24
6180 6836 2.165641 TCACAGGCATAGGACGTTAGTG 59.834 50.000 0.00 0.00 0.00 2.74
6181 6837 2.165641 CACAGGCATAGGACGTTAGTGA 59.834 50.000 0.00 0.00 0.00 3.41
6182 6838 2.829720 ACAGGCATAGGACGTTAGTGAA 59.170 45.455 0.00 0.00 0.00 3.18
6183 6839 3.119101 ACAGGCATAGGACGTTAGTGAAG 60.119 47.826 0.00 0.00 0.00 3.02
6184 6840 3.097614 AGGCATAGGACGTTAGTGAAGT 58.902 45.455 0.00 0.00 0.00 3.01
6185 6841 3.119101 AGGCATAGGACGTTAGTGAAGTG 60.119 47.826 0.00 0.00 0.00 3.16
6186 6842 2.603560 GCATAGGACGTTAGTGAAGTGC 59.396 50.000 0.00 0.00 0.00 4.40
6187 6843 3.845178 CATAGGACGTTAGTGAAGTGCA 58.155 45.455 0.00 0.00 0.00 4.57
6197 6853 1.797025 GTGAAGTGCACTGTAGGTCC 58.203 55.000 22.49 4.36 44.27 4.46
6198 6854 1.344763 GTGAAGTGCACTGTAGGTCCT 59.655 52.381 22.49 0.61 44.27 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
90 92 4.746611 ACACACTAGTTTACGCAACTAACC 59.253 41.667 8.67 0.00 45.62 2.85
116 125 7.863877 AGTTTAGCTTAACAAAATAACAACGGG 59.136 33.333 17.19 0.00 0.00 5.28
160 172 2.477825 CAGCTGATCACTACATTCCCG 58.522 52.381 8.42 0.00 0.00 5.14
206 226 3.726557 AATTCAGGAGCAATGTGGAGA 57.273 42.857 0.00 0.00 0.00 3.71
212 232 6.930722 ACCTTTGTTAAAATTCAGGAGCAATG 59.069 34.615 0.00 0.00 0.00 2.82
235 262 5.803237 ACAGGCCTACTACATACATTACC 57.197 43.478 3.98 0.00 0.00 2.85
266 293 4.770010 ACCCAAAGAATCTGGCGAAATTAA 59.230 37.500 0.00 0.00 32.10 1.40
269 296 2.493278 CACCCAAAGAATCTGGCGAAAT 59.507 45.455 0.00 0.00 32.10 2.17
284 311 0.106918 AGAAACAGTTCGGCACCCAA 60.107 50.000 0.00 0.00 38.90 4.12
310 343 5.163513 GGATTTCACTCGAATTTTGCATGT 58.836 37.500 0.00 0.00 0.00 3.21
311 344 4.563976 GGGATTTCACTCGAATTTTGCATG 59.436 41.667 0.00 0.00 0.00 4.06
352 386 0.251916 TATCCTCCGCCAACAACAGG 59.748 55.000 0.00 0.00 0.00 4.00
440 474 3.200385 AGCAGGAATCTTGCAGAGAAGAT 59.800 43.478 19.35 0.00 43.24 2.40
445 479 2.434428 ACAAGCAGGAATCTTGCAGAG 58.566 47.619 19.35 10.47 43.40 3.35
453 487 4.519540 TTTGCCTTTACAAGCAGGAATC 57.480 40.909 0.00 0.00 40.73 2.52
456 490 3.495331 TCATTTGCCTTTACAAGCAGGA 58.505 40.909 0.00 0.00 40.73 3.86
501 537 5.050295 GGGATCCTTCATTTCGTTTCGTATC 60.050 44.000 12.58 0.00 0.00 2.24
502 538 4.814771 GGGATCCTTCATTTCGTTTCGTAT 59.185 41.667 12.58 0.00 0.00 3.06
503 539 4.081309 AGGGATCCTTCATTTCGTTTCGTA 60.081 41.667 12.58 0.00 0.00 3.43
504 540 3.007635 GGGATCCTTCATTTCGTTTCGT 58.992 45.455 12.58 0.00 0.00 3.85
505 541 3.270877 AGGGATCCTTCATTTCGTTTCG 58.729 45.455 12.58 0.00 0.00 3.46
506 542 4.142381 CCAAGGGATCCTTCATTTCGTTTC 60.142 45.833 12.58 0.00 42.67 2.78
507 543 3.763897 CCAAGGGATCCTTCATTTCGTTT 59.236 43.478 12.58 0.00 42.67 3.60
508 544 3.356290 CCAAGGGATCCTTCATTTCGTT 58.644 45.455 12.58 0.00 42.67 3.85
519 555 0.610785 TGGTTTTCGCCAAGGGATCC 60.611 55.000 1.92 1.92 35.25 3.36
531 571 2.874751 CCGTCCGCCATGGTTTTC 59.125 61.111 14.67 1.49 39.52 2.29
638 678 1.416434 GGAAAAACTCGCTCGCTCG 59.584 57.895 0.00 0.00 0.00 5.03
639 679 0.670854 AGGGAAAAACTCGCTCGCTC 60.671 55.000 0.00 0.00 43.61 5.03
640 680 0.250338 AAGGGAAAAACTCGCTCGCT 60.250 50.000 0.00 0.00 46.17 4.93
641 681 0.591659 AAAGGGAAAAACTCGCTCGC 59.408 50.000 0.00 0.00 46.17 5.03
642 682 2.548480 AGAAAAGGGAAAAACTCGCTCG 59.452 45.455 0.00 0.00 46.17 5.03
643 683 4.569761 AAGAAAAGGGAAAAACTCGCTC 57.430 40.909 0.00 0.00 46.17 5.03
645 685 4.260212 GCAAAAGAAAAGGGAAAAACTCGC 60.260 41.667 0.00 0.00 37.26 5.03
646 686 5.109210 AGCAAAAGAAAAGGGAAAAACTCG 58.891 37.500 0.00 0.00 0.00 4.18
647 687 6.818644 AGAAGCAAAAGAAAAGGGAAAAACTC 59.181 34.615 0.00 0.00 0.00 3.01
648 688 6.711277 AGAAGCAAAAGAAAAGGGAAAAACT 58.289 32.000 0.00 0.00 0.00 2.66
649 689 6.985188 AGAAGCAAAAGAAAAGGGAAAAAC 57.015 33.333 0.00 0.00 0.00 2.43
652 692 5.353956 GCAAAGAAGCAAAAGAAAAGGGAAA 59.646 36.000 0.00 0.00 0.00 3.13
655 695 3.561310 GGCAAAGAAGCAAAAGAAAAGGG 59.439 43.478 0.00 0.00 35.83 3.95
656 696 4.445453 AGGCAAAGAAGCAAAAGAAAAGG 58.555 39.130 0.00 0.00 35.83 3.11
657 697 5.814188 AGAAGGCAAAGAAGCAAAAGAAAAG 59.186 36.000 0.00 0.00 35.83 2.27
661 701 4.646492 AGAAGAAGGCAAAGAAGCAAAAGA 59.354 37.500 0.00 0.00 35.83 2.52
761 819 3.711086 TCGCTTAGCTTAATCTGCTCTG 58.289 45.455 1.76 0.00 41.46 3.35
768 826 3.120854 CCGCTCAATCGCTTAGCTTAATC 60.121 47.826 1.76 0.00 34.03 1.75
821 879 4.785453 CAAGGTGGGAGGGAGCGC 62.785 72.222 0.00 0.00 0.00 5.92
838 896 3.072486 GCATGTGGTCAGCATGGGC 62.072 63.158 7.29 0.00 42.72 5.36
869 927 2.124942 GAAGAAGGCCGGGAGCTG 60.125 66.667 2.18 0.00 43.05 4.24
871 929 1.450491 GAAGAAGAAGGCCGGGAGC 60.450 63.158 2.18 0.00 42.60 4.70
872 930 0.391793 GTGAAGAAGAAGGCCGGGAG 60.392 60.000 2.18 0.00 0.00 4.30
873 931 0.836400 AGTGAAGAAGAAGGCCGGGA 60.836 55.000 2.18 0.00 0.00 5.14
874 932 0.391793 GAGTGAAGAAGAAGGCCGGG 60.392 60.000 2.18 0.00 0.00 5.73
875 933 0.391793 GGAGTGAAGAAGAAGGCCGG 60.392 60.000 0.00 0.00 0.00 6.13
876 934 0.321671 TGGAGTGAAGAAGAAGGCCG 59.678 55.000 0.00 0.00 0.00 6.13
898 956 0.302890 CGTACGTGGACTAGTAGCGG 59.697 60.000 7.22 1.31 0.00 5.52
899 957 1.002366 ACGTACGTGGACTAGTAGCG 58.998 55.000 22.14 3.45 0.00 4.26
900 958 2.285488 GGTACGTACGTGGACTAGTAGC 59.715 54.545 30.25 13.55 0.00 3.58
950 1008 1.075151 CCTACCTGTCCCTCTCCCC 60.075 68.421 0.00 0.00 0.00 4.81
1386 1456 4.899239 CTCATCGTGGAGGGCGCC 62.899 72.222 21.18 21.18 0.00 6.53
1393 1463 1.758514 GAGGAGGGCTCATCGTGGA 60.759 63.158 0.00 0.00 30.51 4.02
1395 1465 2.801631 GGGAGGAGGGCTCATCGTG 61.802 68.421 0.00 0.00 40.93 4.35
1585 1676 2.949106 CTGCAAGGCCTGAACACG 59.051 61.111 5.69 0.00 0.00 4.49
1616 1713 8.962884 ACATAGGAAAAGAAAACAAAAGCAAT 57.037 26.923 0.00 0.00 0.00 3.56
1645 1742 4.747108 ACATATCGCACAGAAACTAGATGC 59.253 41.667 0.00 0.00 0.00 3.91
1684 1793 5.239306 TCAATCTGCAGGAAACAAACAGTAG 59.761 40.000 15.13 0.00 0.00 2.57
1818 1943 6.713520 CAAACAAGAAGTTGAGAGTTCAGAG 58.286 40.000 0.00 0.00 41.19 3.35
1979 2107 3.099141 AGAGAGAGAGAGAAAGCAAGGG 58.901 50.000 0.00 0.00 0.00 3.95
1990 2118 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1993 2121 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1995 2123 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1996 2124 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1997 2125 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1998 2126 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1999 2127 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2000 2128 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2001 2129 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2002 2130 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2003 2131 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2004 2132 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2005 2133 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2006 2134 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
2007 2135 5.867903 AAGAGAGAGAGAGAGAGAGAGAG 57.132 47.826 0.00 0.00 0.00 3.20
2008 2136 6.627087 AAAAGAGAGAGAGAGAGAGAGAGA 57.373 41.667 0.00 0.00 0.00 3.10
2009 2137 8.970859 AATAAAAGAGAGAGAGAGAGAGAGAG 57.029 38.462 0.00 0.00 0.00 3.20
2010 2138 9.177608 CAAATAAAAGAGAGAGAGAGAGAGAGA 57.822 37.037 0.00 0.00 0.00 3.10
2011 2139 9.177608 TCAAATAAAAGAGAGAGAGAGAGAGAG 57.822 37.037 0.00 0.00 0.00 3.20
2012 2140 8.956426 GTCAAATAAAAGAGAGAGAGAGAGAGA 58.044 37.037 0.00 0.00 0.00 3.10
2013 2141 8.960591 AGTCAAATAAAAGAGAGAGAGAGAGAG 58.039 37.037 0.00 0.00 0.00 3.20
2014 2142 8.877864 AGTCAAATAAAAGAGAGAGAGAGAGA 57.122 34.615 0.00 0.00 0.00 3.10
2032 2160 7.530426 AGTGAAAGCAAGGAAATAGTCAAAT 57.470 32.000 0.00 0.00 0.00 2.32
2458 2605 1.123655 GAGCAAAAACAGTCAAGCGC 58.876 50.000 0.00 0.00 0.00 5.92
2506 2653 1.663911 TACTTGGGCCTCCTTGCTTA 58.336 50.000 4.53 0.00 0.00 3.09
2536 2683 1.275291 TCACCTCTAACGAAAGGCTGG 59.725 52.381 0.00 0.00 36.01 4.85
2545 2692 2.482142 GGGAAGCATCTCACCTCTAACG 60.482 54.545 0.00 0.00 0.00 3.18
2701 2848 6.437928 CATGAACACAAAGTAGCTTGCTAAA 58.562 36.000 3.72 0.00 0.00 1.85
2718 2866 0.178995 TCCAAGGCTGTGCATGAACA 60.179 50.000 6.30 6.30 0.00 3.18
2723 2871 0.892358 CACACTCCAAGGCTGTGCAT 60.892 55.000 2.88 0.00 35.33 3.96
2901 3050 0.321671 GATAGCGCAAGGCCTGGATA 59.678 55.000 12.85 5.15 45.17 2.59
3057 3206 6.588719 TTACAATCTGCCTATGCTGTTTTT 57.411 33.333 0.00 0.00 38.71 1.94
3058 3207 6.567050 CATTACAATCTGCCTATGCTGTTTT 58.433 36.000 0.00 0.00 38.71 2.43
3059 3208 5.450965 GCATTACAATCTGCCTATGCTGTTT 60.451 40.000 0.00 0.00 36.39 2.83
3060 3209 4.037208 GCATTACAATCTGCCTATGCTGTT 59.963 41.667 0.00 0.00 36.39 3.16
3061 3210 3.567164 GCATTACAATCTGCCTATGCTGT 59.433 43.478 0.00 0.00 36.39 4.40
3062 3211 3.819337 AGCATTACAATCTGCCTATGCTG 59.181 43.478 6.59 0.00 44.88 4.41
3063 3212 4.096190 AGCATTACAATCTGCCTATGCT 57.904 40.909 0.00 0.00 42.64 3.79
3064 3213 3.190118 GGAGCATTACAATCTGCCTATGC 59.810 47.826 0.00 0.00 39.22 3.14
3065 3214 4.649692 AGGAGCATTACAATCTGCCTATG 58.350 43.478 0.00 0.00 39.22 2.23
3066 3215 4.989875 AGGAGCATTACAATCTGCCTAT 57.010 40.909 0.00 0.00 39.22 2.57
3067 3216 4.778213 AAGGAGCATTACAATCTGCCTA 57.222 40.909 0.00 0.00 39.22 3.93
3068 3217 3.659183 AAGGAGCATTACAATCTGCCT 57.341 42.857 0.00 0.00 39.22 4.75
3069 3218 3.565902 GGTAAGGAGCATTACAATCTGCC 59.434 47.826 7.26 0.00 39.22 4.85
3070 3219 4.199310 TGGTAAGGAGCATTACAATCTGC 58.801 43.478 7.26 0.00 37.38 4.26
3071 3220 6.057533 TCATGGTAAGGAGCATTACAATCTG 58.942 40.000 7.26 0.35 41.91 2.90
3072 3221 6.252599 TCATGGTAAGGAGCATTACAATCT 57.747 37.500 7.26 0.00 41.91 2.40
3073 3222 6.942532 TTCATGGTAAGGAGCATTACAATC 57.057 37.500 7.26 0.00 41.91 2.67
3074 3223 7.230108 CAGATTCATGGTAAGGAGCATTACAAT 59.770 37.037 7.26 0.00 41.91 2.71
3075 3224 6.543465 CAGATTCATGGTAAGGAGCATTACAA 59.457 38.462 7.26 0.00 41.91 2.41
3076 3225 6.057533 CAGATTCATGGTAAGGAGCATTACA 58.942 40.000 7.26 0.00 41.91 2.41
3077 3226 6.058183 ACAGATTCATGGTAAGGAGCATTAC 58.942 40.000 0.00 0.00 41.91 1.89
3078 3227 6.252599 ACAGATTCATGGTAAGGAGCATTA 57.747 37.500 0.00 0.00 41.91 1.90
3079 3228 5.121380 ACAGATTCATGGTAAGGAGCATT 57.879 39.130 0.00 0.00 41.91 3.56
3090 3239 6.652481 ACACTCTTACTGAAACAGATTCATGG 59.348 38.462 5.76 0.00 46.62 3.66
3223 3374 1.948104 TGCTCGGGGATGAATTAACG 58.052 50.000 0.00 0.00 0.00 3.18
3241 3392 1.664016 GCGGTGCAACTCATCACTTTG 60.664 52.381 0.00 0.00 36.74 2.77
3335 3486 5.324784 ACTTGAAAGTGTGGAAAGAAACC 57.675 39.130 0.00 0.00 37.98 3.27
3382 3534 6.049149 ACCATTACCAGAGTCGATGTTAATG 58.951 40.000 7.46 7.46 0.00 1.90
3405 3557 2.159226 CGGTGGAGAGACATCCTACAAC 60.159 54.545 0.00 0.00 40.29 3.32
3426 3578 1.659211 CGCAAAAACCGCAGTAGTGAC 60.659 52.381 0.42 0.00 0.00 3.67
3461 3613 2.170607 TCTAAACTGCTATCAGCCCACC 59.829 50.000 0.00 0.00 44.10 4.61
3573 3725 1.822186 AGGGTCAAACGTGTGTGCC 60.822 57.895 5.45 9.32 0.00 5.01
3668 3820 5.973565 AGAACTGAAAAGAAGAAATTGTGCG 59.026 36.000 0.00 0.00 0.00 5.34
3804 3956 5.675684 AGTCTTTTGCCTCCTTTCAAAAA 57.324 34.783 0.00 0.00 40.36 1.94
3805 3957 5.418676 CAAGTCTTTTGCCTCCTTTCAAAA 58.581 37.500 0.00 0.00 39.13 2.44
3806 3958 4.680440 GCAAGTCTTTTGCCTCCTTTCAAA 60.680 41.667 0.54 0.00 39.38 2.69
3807 3959 3.181476 GCAAGTCTTTTGCCTCCTTTCAA 60.181 43.478 0.54 0.00 39.38 2.69
3808 3960 2.362077 GCAAGTCTTTTGCCTCCTTTCA 59.638 45.455 0.54 0.00 39.38 2.69
3809 3961 3.018598 GCAAGTCTTTTGCCTCCTTTC 57.981 47.619 0.54 0.00 39.38 2.62
3817 3969 3.648339 TGAATGAGGCAAGTCTTTTGC 57.352 42.857 3.39 3.39 44.22 3.68
3818 3970 9.859427 TTATTAATGAATGAGGCAAGTCTTTTG 57.141 29.630 0.00 0.00 0.00 2.44
3821 3973 8.689972 CCTTTATTAATGAATGAGGCAAGTCTT 58.310 33.333 0.00 0.00 0.00 3.01
3822 3974 8.055181 TCCTTTATTAATGAATGAGGCAAGTCT 58.945 33.333 0.00 0.00 33.17 3.24
3823 3975 8.225603 TCCTTTATTAATGAATGAGGCAAGTC 57.774 34.615 0.00 0.00 33.17 3.01
3824 3976 8.055181 TCTCCTTTATTAATGAATGAGGCAAGT 58.945 33.333 18.65 0.00 33.17 3.16
3825 3977 8.455903 TCTCCTTTATTAATGAATGAGGCAAG 57.544 34.615 18.65 3.51 33.17 4.01
3826 3978 7.503566 CCTCTCCTTTATTAATGAATGAGGCAA 59.496 37.037 18.65 5.67 33.17 4.52
3827 3979 7.000472 CCTCTCCTTTATTAATGAATGAGGCA 59.000 38.462 18.65 6.17 33.17 4.75
3828 3980 7.227156 TCCTCTCCTTTATTAATGAATGAGGC 58.773 38.462 18.65 0.00 37.75 4.70
3841 3993 8.425703 GCTAAACTCTGTTATCCTCTCCTTTAT 58.574 37.037 0.00 0.00 0.00 1.40
3842 3994 7.399191 TGCTAAACTCTGTTATCCTCTCCTTTA 59.601 37.037 0.00 0.00 0.00 1.85
3843 3995 6.213600 TGCTAAACTCTGTTATCCTCTCCTTT 59.786 38.462 0.00 0.00 0.00 3.11
3844 3996 5.721960 TGCTAAACTCTGTTATCCTCTCCTT 59.278 40.000 0.00 0.00 0.00 3.36
3845 3997 5.273208 TGCTAAACTCTGTTATCCTCTCCT 58.727 41.667 0.00 0.00 0.00 3.69
3846 3998 5.599999 TGCTAAACTCTGTTATCCTCTCC 57.400 43.478 0.00 0.00 0.00 3.71
3847 3999 6.810911 TCATGCTAAACTCTGTTATCCTCTC 58.189 40.000 0.00 0.00 0.00 3.20
3848 4000 6.382570 ACTCATGCTAAACTCTGTTATCCTCT 59.617 38.462 0.00 0.00 0.00 3.69
3849 4001 6.578023 ACTCATGCTAAACTCTGTTATCCTC 58.422 40.000 0.00 0.00 0.00 3.71
3850 4002 6.552445 ACTCATGCTAAACTCTGTTATCCT 57.448 37.500 0.00 0.00 0.00 3.24
3851 4003 7.764443 TGTAACTCATGCTAAACTCTGTTATCC 59.236 37.037 0.00 0.00 0.00 2.59
3852 4004 8.596380 GTGTAACTCATGCTAAACTCTGTTATC 58.404 37.037 0.00 0.00 0.00 1.75
3853 4005 8.480643 GTGTAACTCATGCTAAACTCTGTTAT 57.519 34.615 0.00 0.00 0.00 1.89
3854 4006 7.884816 GTGTAACTCATGCTAAACTCTGTTA 57.115 36.000 0.00 0.00 0.00 2.41
3855 4007 6.787085 GTGTAACTCATGCTAAACTCTGTT 57.213 37.500 0.00 0.00 0.00 3.16
3870 4022 7.737621 TGCCTCCTTTTGCATAAGTGTAACTC 61.738 42.308 14.65 0.39 38.48 3.01
3871 4023 5.980964 TGCCTCCTTTTGCATAAGTGTAACT 60.981 40.000 14.65 0.00 40.49 2.24
3872 4024 4.217550 TGCCTCCTTTTGCATAAGTGTAAC 59.782 41.667 14.65 2.75 31.31 2.50
3873 4025 4.402829 TGCCTCCTTTTGCATAAGTGTAA 58.597 39.130 14.65 0.00 31.31 2.41
3874 4026 4.027674 TGCCTCCTTTTGCATAAGTGTA 57.972 40.909 14.65 1.74 31.31 2.90
3875 4027 2.875296 TGCCTCCTTTTGCATAAGTGT 58.125 42.857 14.65 0.00 31.31 3.55
3876 4028 3.940209 TTGCCTCCTTTTGCATAAGTG 57.060 42.857 14.65 7.39 37.33 3.16
3877 4029 5.716703 ACTTATTGCCTCCTTTTGCATAAGT 59.283 36.000 14.65 5.79 37.20 2.24
3878 4030 6.212888 ACTTATTGCCTCCTTTTGCATAAG 57.787 37.500 9.69 9.69 37.33 1.73
3879 4031 6.603940 AACTTATTGCCTCCTTTTGCATAA 57.396 33.333 0.00 0.00 37.33 1.90
3880 4032 6.603940 AAACTTATTGCCTCCTTTTGCATA 57.396 33.333 0.00 0.00 37.33 3.14
3881 4033 5.488262 AAACTTATTGCCTCCTTTTGCAT 57.512 34.783 0.00 0.00 37.33 3.96
3882 4034 4.953940 AAACTTATTGCCTCCTTTTGCA 57.046 36.364 0.00 0.00 35.27 4.08
3883 4035 7.905604 AAATAAACTTATTGCCTCCTTTTGC 57.094 32.000 0.00 0.00 33.85 3.68
3885 4037 9.938280 GGTTAAATAAACTTATTGCCTCCTTTT 57.062 29.630 0.00 0.00 38.23 2.27
3886 4038 9.095700 TGGTTAAATAAACTTATTGCCTCCTTT 57.904 29.630 0.00 0.00 38.23 3.11
3887 4039 8.528643 GTGGTTAAATAAACTTATTGCCTCCTT 58.471 33.333 0.00 0.00 38.23 3.36
3888 4040 7.123697 GGTGGTTAAATAAACTTATTGCCTCCT 59.876 37.037 15.55 0.00 38.23 3.69
3889 4041 7.123697 AGGTGGTTAAATAAACTTATTGCCTCC 59.876 37.037 15.31 15.31 38.23 4.30
3890 4042 8.063200 AGGTGGTTAAATAAACTTATTGCCTC 57.937 34.615 0.00 1.79 38.23 4.70
3891 4043 9.536510 TTAGGTGGTTAAATAAACTTATTGCCT 57.463 29.630 0.00 0.00 38.23 4.75
3892 4044 9.577110 GTTAGGTGGTTAAATAAACTTATTGCC 57.423 33.333 0.00 1.27 38.23 4.52
3893 4045 9.577110 GGTTAGGTGGTTAAATAAACTTATTGC 57.423 33.333 0.00 0.00 38.23 3.56
3894 4046 9.777575 CGGTTAGGTGGTTAAATAAACTTATTG 57.222 33.333 0.00 0.00 38.23 1.90
3895 4047 8.959548 CCGGTTAGGTGGTTAAATAAACTTATT 58.040 33.333 0.00 0.00 35.21 1.40
3896 4048 8.328014 TCCGGTTAGGTGGTTAAATAAACTTAT 58.672 33.333 0.00 0.00 41.99 1.73
3897 4049 7.606073 GTCCGGTTAGGTGGTTAAATAAACTTA 59.394 37.037 0.00 0.00 41.99 2.24
3898 4050 6.430925 GTCCGGTTAGGTGGTTAAATAAACTT 59.569 38.462 0.00 0.00 41.99 2.66
3899 4051 5.939883 GTCCGGTTAGGTGGTTAAATAAACT 59.060 40.000 0.00 0.00 41.99 2.66
3900 4052 5.123820 GGTCCGGTTAGGTGGTTAAATAAAC 59.876 44.000 0.00 0.00 41.99 2.01
3901 4053 5.222007 TGGTCCGGTTAGGTGGTTAAATAAA 60.222 40.000 0.00 0.00 41.99 1.40
3908 4060 0.472352 TCTGGTCCGGTTAGGTGGTT 60.472 55.000 0.00 0.00 41.99 3.67
3921 4073 3.266510 TGTGCATCAGGTTATCTGGTC 57.733 47.619 0.00 0.00 43.53 4.02
4043 4196 1.678970 GGTGCCCATGGTGTTCTCC 60.679 63.158 11.73 3.73 0.00 3.71
4148 4301 2.305052 TCCACTTACGAGAGGAGAGTCA 59.695 50.000 0.00 0.00 37.68 3.41
4160 4313 8.657074 TCATATTTAGGTGAAATCCACTTACG 57.343 34.615 0.00 0.00 45.03 3.18
4196 4349 8.089115 AGGATTAAATTTATAGTCGCAAGCTC 57.911 34.615 0.00 0.00 37.18 4.09
4210 4363 5.444176 CAGCAGGGAGAGAGGATTAAATTT 58.556 41.667 0.00 0.00 0.00 1.82
4226 4380 1.064505 CGAAACATACATGCAGCAGGG 59.935 52.381 12.54 3.52 0.00 4.45
4227 4381 1.532505 GCGAAACATACATGCAGCAGG 60.533 52.381 5.26 5.26 0.00 4.85
4228 4382 1.130938 TGCGAAACATACATGCAGCAG 59.869 47.619 0.00 0.00 0.00 4.24
4360 4979 0.951558 AGGCAAACTGAAACGCGATT 59.048 45.000 15.93 7.45 0.00 3.34
4387 5006 3.233980 ACGCTGTCCTGCAGGTGA 61.234 61.111 31.58 18.09 45.14 4.02
4462 5081 4.057428 GAGGACGACAGCGCCAGT 62.057 66.667 2.29 2.35 42.48 4.00
4492 5111 1.411977 ACGAGATGAGAGCTTCCATGG 59.588 52.381 4.97 4.97 0.00 3.66
4575 5194 0.181114 AACTGCAAGACCACAGAGCA 59.819 50.000 0.00 0.00 37.35 4.26
4576 5195 2.169832 TAACTGCAAGACCACAGAGC 57.830 50.000 0.00 0.00 37.35 4.09
4577 5196 3.930336 TGATAACTGCAAGACCACAGAG 58.070 45.455 0.00 0.00 37.35 3.35
4578 5197 4.558226 ATGATAACTGCAAGACCACAGA 57.442 40.909 0.00 0.00 37.35 3.41
4579 5198 5.423015 ACTATGATAACTGCAAGACCACAG 58.577 41.667 0.00 0.00 39.86 3.66
4580 5199 5.420725 ACTATGATAACTGCAAGACCACA 57.579 39.130 0.00 0.00 37.43 4.17
4581 5200 7.599245 GGTATACTATGATAACTGCAAGACCAC 59.401 40.741 2.25 0.00 37.43 4.16
4754 5376 2.465813 ACCTTGAGAGAGCAGCATAGT 58.534 47.619 0.00 0.00 0.00 2.12
4825 5448 4.035675 GGAGAAATACCACAACAGCATAGC 59.964 45.833 0.00 0.00 0.00 2.97
4837 5460 3.073798 TCAAAGCCAGTGGAGAAATACCA 59.926 43.478 15.20 0.00 34.84 3.25
4838 5461 3.686016 TCAAAGCCAGTGGAGAAATACC 58.314 45.455 15.20 0.00 0.00 2.73
4839 5462 5.065731 CAGATCAAAGCCAGTGGAGAAATAC 59.934 44.000 15.20 0.00 0.00 1.89
4840 5463 5.045651 TCAGATCAAAGCCAGTGGAGAAATA 60.046 40.000 15.20 0.00 0.00 1.40
4841 5464 4.015084 CAGATCAAAGCCAGTGGAGAAAT 58.985 43.478 15.20 0.00 0.00 2.17
4842 5465 3.072915 TCAGATCAAAGCCAGTGGAGAAA 59.927 43.478 15.20 0.00 0.00 2.52
4843 5466 2.639347 TCAGATCAAAGCCAGTGGAGAA 59.361 45.455 15.20 0.00 0.00 2.87
4847 5470 1.081892 CGTCAGATCAAAGCCAGTGG 58.918 55.000 4.20 4.20 0.00 4.00
4848 5471 1.081892 CCGTCAGATCAAAGCCAGTG 58.918 55.000 0.00 0.00 0.00 3.66
4849 5472 0.674895 GCCGTCAGATCAAAGCCAGT 60.675 55.000 0.00 0.00 0.00 4.00
4850 5473 1.699656 CGCCGTCAGATCAAAGCCAG 61.700 60.000 0.00 0.00 0.00 4.85
4851 5474 1.741401 CGCCGTCAGATCAAAGCCA 60.741 57.895 0.00 0.00 0.00 4.75
4852 5475 1.696832 GACGCCGTCAGATCAAAGCC 61.697 60.000 13.23 0.00 32.09 4.35
4853 5476 1.710339 GACGCCGTCAGATCAAAGC 59.290 57.895 13.23 0.00 32.09 3.51
4854 5477 1.991430 CGACGCCGTCAGATCAAAG 59.009 57.895 18.40 0.00 32.09 2.77
4866 5489 3.490759 CAGCACCATCACGACGCC 61.491 66.667 0.00 0.00 0.00 5.68
4867 5490 4.152625 GCAGCACCATCACGACGC 62.153 66.667 0.00 0.00 0.00 5.19
4869 5492 2.393768 CCTGCAGCACCATCACGAC 61.394 63.158 8.66 0.00 0.00 4.34
4870 5493 2.046988 CCTGCAGCACCATCACGA 60.047 61.111 8.66 0.00 0.00 4.35
4871 5494 3.807538 GCCTGCAGCACCATCACG 61.808 66.667 8.66 0.00 42.97 4.35
4873 5496 3.333899 ATCGCCTGCAGCACCATCA 62.334 57.895 8.66 0.00 44.04 3.07
4874 5497 2.515523 ATCGCCTGCAGCACCATC 60.516 61.111 8.66 0.00 44.04 3.51
5195 5827 1.807742 GATCGTCCATCCCTCGACTAG 59.192 57.143 0.00 0.00 36.46 2.57
5208 5841 0.179258 GCGACAACAAACGATCGTCC 60.179 55.000 22.98 4.31 36.93 4.79
5240 5879 2.098614 TCTCACTCAGGTCTGATGCTC 58.901 52.381 0.75 0.00 39.13 4.26
5241 5880 2.101783 CTCTCACTCAGGTCTGATGCT 58.898 52.381 0.75 0.00 39.13 3.79
5242 5881 1.824230 ACTCTCACTCAGGTCTGATGC 59.176 52.381 0.75 0.00 39.13 3.91
5243 5882 4.704540 AGTTACTCTCACTCAGGTCTGATG 59.295 45.833 0.75 3.34 39.13 3.07
5247 5886 4.896482 ACAAAGTTACTCTCACTCAGGTCT 59.104 41.667 0.00 0.00 0.00 3.85
5258 5897 2.372172 CCCAGTCCCACAAAGTTACTCT 59.628 50.000 0.00 0.00 0.00 3.24
5278 5918 1.664333 CCAAACATTGCACCGCACC 60.664 57.895 0.00 0.00 38.71 5.01
5279 5919 0.038343 ATCCAAACATTGCACCGCAC 60.038 50.000 0.00 0.00 38.71 5.34
5280 5920 0.038435 CATCCAAACATTGCACCGCA 60.038 50.000 0.00 0.00 36.47 5.69
5282 5922 2.532235 CATCATCCAAACATTGCACCG 58.468 47.619 0.00 0.00 0.00 4.94
5283 5923 2.234414 ACCATCATCCAAACATTGCACC 59.766 45.455 0.00 0.00 0.00 5.01
5285 5925 2.234168 CCACCATCATCCAAACATTGCA 59.766 45.455 0.00 0.00 0.00 4.08
5288 5928 2.234414 GCACCACCATCATCCAAACATT 59.766 45.455 0.00 0.00 0.00 2.71
5289 5929 1.826720 GCACCACCATCATCCAAACAT 59.173 47.619 0.00 0.00 0.00 2.71
5291 5931 1.474077 GAGCACCACCATCATCCAAAC 59.526 52.381 0.00 0.00 0.00 2.93
5292 5932 1.355381 AGAGCACCACCATCATCCAAA 59.645 47.619 0.00 0.00 0.00 3.28
5309 5955 3.190079 CACACCATCAATCCGTACAGAG 58.810 50.000 0.00 0.00 0.00 3.35
5365 6013 6.318900 AGGATAAAAAGGAGGAAATGTAAGCG 59.681 38.462 0.00 0.00 0.00 4.68
5366 6014 7.558081 AGAGGATAAAAAGGAGGAAATGTAAGC 59.442 37.037 0.00 0.00 0.00 3.09
5385 6033 9.237187 CATTGCTTGTAGATAGAGTAGAGGATA 57.763 37.037 0.00 0.00 0.00 2.59
5386 6034 7.178274 CCATTGCTTGTAGATAGAGTAGAGGAT 59.822 40.741 0.00 0.00 0.00 3.24
5387 6035 6.491745 CCATTGCTTGTAGATAGAGTAGAGGA 59.508 42.308 0.00 0.00 0.00 3.71
5389 6037 6.266558 ACCCATTGCTTGTAGATAGAGTAGAG 59.733 42.308 0.00 0.00 0.00 2.43
5441 6095 2.612212 CGTTGTTATCCCTACATGTGGC 59.388 50.000 9.11 0.00 0.00 5.01
5451 6105 1.737793 CACCAGCTTCGTTGTTATCCC 59.262 52.381 0.00 0.00 0.00 3.85
5452 6106 1.737793 CCACCAGCTTCGTTGTTATCC 59.262 52.381 0.00 0.00 0.00 2.59
5453 6107 2.695359 TCCACCAGCTTCGTTGTTATC 58.305 47.619 0.00 0.00 0.00 1.75
5454 6108 2.812011 GTTCCACCAGCTTCGTTGTTAT 59.188 45.455 0.00 0.00 0.00 1.89
5455 6109 2.158871 AGTTCCACCAGCTTCGTTGTTA 60.159 45.455 0.00 0.00 0.00 2.41
5456 6110 1.021968 GTTCCACCAGCTTCGTTGTT 58.978 50.000 0.00 0.00 0.00 2.83
5457 6111 0.180406 AGTTCCACCAGCTTCGTTGT 59.820 50.000 0.00 0.00 0.00 3.32
5458 6112 0.588252 CAGTTCCACCAGCTTCGTTG 59.412 55.000 0.00 0.00 0.00 4.10
5459 6113 0.535102 CCAGTTCCACCAGCTTCGTT 60.535 55.000 0.00 0.00 0.00 3.85
5460 6114 1.071471 CCAGTTCCACCAGCTTCGT 59.929 57.895 0.00 0.00 0.00 3.85
5461 6115 2.328099 GCCAGTTCCACCAGCTTCG 61.328 63.158 0.00 0.00 0.00 3.79
5462 6116 0.324943 TAGCCAGTTCCACCAGCTTC 59.675 55.000 0.00 0.00 35.03 3.86
5463 6117 0.036875 GTAGCCAGTTCCACCAGCTT 59.963 55.000 0.00 0.00 35.03 3.74
5464 6118 1.679898 GTAGCCAGTTCCACCAGCT 59.320 57.895 0.00 0.00 37.58 4.24
5465 6119 1.377333 GGTAGCCAGTTCCACCAGC 60.377 63.158 0.00 0.00 0.00 4.85
5466 6120 0.321653 GTGGTAGCCAGTTCCACCAG 60.322 60.000 0.00 0.00 43.84 4.00
5467 6121 1.758592 GTGGTAGCCAGTTCCACCA 59.241 57.895 0.00 0.00 43.84 4.17
5468 6122 4.716003 GTGGTAGCCAGTTCCACC 57.284 61.111 0.00 0.00 43.84 4.61
5470 6124 0.766674 AGGTGTGGTAGCCAGTTCCA 60.767 55.000 0.00 0.00 32.34 3.53
5471 6125 0.321653 CAGGTGTGGTAGCCAGTTCC 60.322 60.000 0.00 0.00 32.34 3.62
5472 6126 0.396811 ACAGGTGTGGTAGCCAGTTC 59.603 55.000 0.00 0.00 32.34 3.01
5473 6127 0.843984 AACAGGTGTGGTAGCCAGTT 59.156 50.000 0.00 0.00 32.34 3.16
5474 6128 0.843984 AAACAGGTGTGGTAGCCAGT 59.156 50.000 0.00 0.00 32.34 4.00
5475 6129 1.202758 TGAAACAGGTGTGGTAGCCAG 60.203 52.381 0.00 0.00 32.34 4.85
5476 6130 0.840617 TGAAACAGGTGTGGTAGCCA 59.159 50.000 0.00 0.00 0.00 4.75
5477 6131 1.202770 ACTGAAACAGGTGTGGTAGCC 60.203 52.381 0.00 0.00 35.51 3.93
5478 6132 1.873591 CACTGAAACAGGTGTGGTAGC 59.126 52.381 0.00 0.00 35.51 3.58
5479 6133 2.494059 CCACTGAAACAGGTGTGGTAG 58.506 52.381 0.00 0.00 43.41 3.18
5480 6134 2.631160 CCACTGAAACAGGTGTGGTA 57.369 50.000 0.00 0.00 43.41 3.25
5481 6135 3.494850 CCACTGAAACAGGTGTGGT 57.505 52.632 0.00 0.00 43.41 4.16
5483 6137 1.334869 GCTTCCACTGAAACAGGTGTG 59.665 52.381 0.00 0.00 35.51 3.82
5484 6138 1.680338 GCTTCCACTGAAACAGGTGT 58.320 50.000 0.00 0.00 35.51 4.16
5485 6139 0.954452 GGCTTCCACTGAAACAGGTG 59.046 55.000 0.00 0.00 35.51 4.00
5486 6140 0.550914 TGGCTTCCACTGAAACAGGT 59.449 50.000 0.00 0.00 35.51 4.00
5487 6141 1.691196 TTGGCTTCCACTGAAACAGG 58.309 50.000 0.00 0.00 35.51 4.00
5488 6142 3.447742 GTTTTGGCTTCCACTGAAACAG 58.552 45.455 6.72 0.00 34.06 3.16
5489 6143 2.159310 CGTTTTGGCTTCCACTGAAACA 60.159 45.455 10.44 0.00 33.72 2.83
5490 6144 2.098443 TCGTTTTGGCTTCCACTGAAAC 59.902 45.455 2.96 2.96 31.93 2.78
5491 6145 2.370349 TCGTTTTGGCTTCCACTGAAA 58.630 42.857 0.00 0.00 30.78 2.69
5492 6146 2.045561 TCGTTTTGGCTTCCACTGAA 57.954 45.000 0.00 0.00 30.78 3.02
5493 6147 2.151202 GATCGTTTTGGCTTCCACTGA 58.849 47.619 0.00 0.00 30.78 3.41
5494 6148 1.135972 CGATCGTTTTGGCTTCCACTG 60.136 52.381 7.03 0.00 30.78 3.66
5495 6149 1.156736 CGATCGTTTTGGCTTCCACT 58.843 50.000 7.03 0.00 30.78 4.00
5496 6150 1.128692 CTCGATCGTTTTGGCTTCCAC 59.871 52.381 15.94 0.00 30.78 4.02
5497 6151 1.438651 CTCGATCGTTTTGGCTTCCA 58.561 50.000 15.94 0.00 0.00 3.53
5498 6152 0.727398 CCTCGATCGTTTTGGCTTCC 59.273 55.000 15.94 0.00 0.00 3.46
5499 6153 0.097150 GCCTCGATCGTTTTGGCTTC 59.903 55.000 24.75 7.67 40.36 3.86
5500 6154 1.635663 CGCCTCGATCGTTTTGGCTT 61.636 55.000 26.92 0.00 41.25 4.35
5501 6155 2.100631 CGCCTCGATCGTTTTGGCT 61.101 57.895 26.92 0.00 41.25 4.75
5502 6156 1.908066 AACGCCTCGATCGTTTTGGC 61.908 55.000 23.32 23.32 46.47 4.52
5503 6157 2.159181 AACGCCTCGATCGTTTTGG 58.841 52.632 15.94 13.68 46.47 3.28
5508 6162 2.202570 CCGAAACGCCTCGATCGT 60.203 61.111 15.94 6.99 41.44 3.73
5509 6163 2.202570 ACCGAAACGCCTCGATCG 60.203 61.111 9.36 9.36 41.44 3.69
5510 6164 1.012486 AACACCGAAACGCCTCGATC 61.012 55.000 8.21 0.00 41.44 3.69
5511 6165 0.601841 AAACACCGAAACGCCTCGAT 60.602 50.000 8.21 0.00 41.44 3.59
5512 6166 1.227321 AAACACCGAAACGCCTCGA 60.227 52.632 8.21 0.00 41.44 4.04
5513 6167 1.083015 CAAACACCGAAACGCCTCG 60.083 57.895 0.00 0.00 38.58 4.63
5514 6168 1.281656 CCAAACACCGAAACGCCTC 59.718 57.895 0.00 0.00 0.00 4.70
5515 6169 2.190841 CCCAAACACCGAAACGCCT 61.191 57.895 0.00 0.00 0.00 5.52
5516 6170 2.333581 CCCAAACACCGAAACGCC 59.666 61.111 0.00 0.00 0.00 5.68
5517 6171 2.344521 AAGCCCAAACACCGAAACGC 62.345 55.000 0.00 0.00 0.00 4.84
5518 6172 0.945813 TAAGCCCAAACACCGAAACG 59.054 50.000 0.00 0.00 0.00 3.60
5519 6173 4.769859 TTATAAGCCCAAACACCGAAAC 57.230 40.909 0.00 0.00 0.00 2.78
5520 6174 5.244178 ACAATTATAAGCCCAAACACCGAAA 59.756 36.000 0.00 0.00 0.00 3.46
5521 6175 4.767928 ACAATTATAAGCCCAAACACCGAA 59.232 37.500 0.00 0.00 0.00 4.30
5522 6176 4.156922 CACAATTATAAGCCCAAACACCGA 59.843 41.667 0.00 0.00 0.00 4.69
5523 6177 4.420168 CACAATTATAAGCCCAAACACCG 58.580 43.478 0.00 0.00 0.00 4.94
5524 6178 4.464597 TCCACAATTATAAGCCCAAACACC 59.535 41.667 0.00 0.00 0.00 4.16
5525 6179 5.652994 TCCACAATTATAAGCCCAAACAC 57.347 39.130 0.00 0.00 0.00 3.32
5526 6180 7.350382 TCTATCCACAATTATAAGCCCAAACA 58.650 34.615 0.00 0.00 0.00 2.83
5527 6181 7.817418 TCTATCCACAATTATAAGCCCAAAC 57.183 36.000 0.00 0.00 0.00 2.93
5537 6191 9.193806 GGGCATCAATATTCTATCCACAATTAT 57.806 33.333 0.00 0.00 0.00 1.28
5538 6192 7.336679 CGGGCATCAATATTCTATCCACAATTA 59.663 37.037 0.00 0.00 0.00 1.40
5539 6193 6.151648 CGGGCATCAATATTCTATCCACAATT 59.848 38.462 0.00 0.00 0.00 2.32
5540 6194 5.649395 CGGGCATCAATATTCTATCCACAAT 59.351 40.000 0.00 0.00 0.00 2.71
5541 6195 5.003160 CGGGCATCAATATTCTATCCACAA 58.997 41.667 0.00 0.00 0.00 3.33
5542 6196 4.041567 ACGGGCATCAATATTCTATCCACA 59.958 41.667 0.00 0.00 0.00 4.17
5543 6197 4.579869 ACGGGCATCAATATTCTATCCAC 58.420 43.478 0.00 0.00 0.00 4.02
5544 6198 4.323485 GGACGGGCATCAATATTCTATCCA 60.323 45.833 0.00 0.00 0.00 3.41
5545 6199 4.192317 GGACGGGCATCAATATTCTATCC 58.808 47.826 0.00 0.00 0.00 2.59
5546 6200 4.631813 GTGGACGGGCATCAATATTCTATC 59.368 45.833 0.00 0.00 0.00 2.08
5547 6201 4.579869 GTGGACGGGCATCAATATTCTAT 58.420 43.478 0.00 0.00 0.00 1.98
5548 6202 3.554129 CGTGGACGGGCATCAATATTCTA 60.554 47.826 0.00 0.00 35.37 2.10
5549 6203 2.806745 CGTGGACGGGCATCAATATTCT 60.807 50.000 0.00 0.00 35.37 2.40
5550 6204 1.531149 CGTGGACGGGCATCAATATTC 59.469 52.381 0.00 0.00 35.37 1.75
5551 6205 1.593196 CGTGGACGGGCATCAATATT 58.407 50.000 0.00 0.00 35.37 1.28
5552 6206 0.884704 GCGTGGACGGGCATCAATAT 60.885 55.000 0.71 0.00 40.23 1.28
5553 6207 1.522806 GCGTGGACGGGCATCAATA 60.523 57.895 0.71 0.00 40.23 1.90
5554 6208 2.824041 GCGTGGACGGGCATCAAT 60.824 61.111 0.71 0.00 40.23 2.57
5571 6225 1.540607 CTATAAGGCGTCTGCGTGCG 61.541 60.000 0.00 0.00 44.10 5.34
5572 6226 0.527817 ACTATAAGGCGTCTGCGTGC 60.528 55.000 0.00 0.00 44.10 5.34
5573 6227 1.852895 GAACTATAAGGCGTCTGCGTG 59.147 52.381 0.00 0.00 44.10 5.34
5574 6228 1.533338 CGAACTATAAGGCGTCTGCGT 60.533 52.381 0.00 0.00 44.10 5.24
5575 6229 1.121240 CGAACTATAAGGCGTCTGCG 58.879 55.000 0.00 0.00 44.10 5.18
5576 6230 1.852895 CACGAACTATAAGGCGTCTGC 59.147 52.381 0.00 0.00 41.71 4.26
5577 6231 2.852413 CACACGAACTATAAGGCGTCTG 59.148 50.000 0.00 0.00 34.37 3.51
5578 6232 2.734492 GCACACGAACTATAAGGCGTCT 60.734 50.000 0.00 0.00 34.37 4.18
5579 6233 1.587034 GCACACGAACTATAAGGCGTC 59.413 52.381 0.00 0.00 34.37 5.19
5580 6234 1.203994 AGCACACGAACTATAAGGCGT 59.796 47.619 0.00 0.00 37.48 5.68
5581 6235 1.588404 CAGCACACGAACTATAAGGCG 59.412 52.381 0.00 0.00 0.00 5.52
5582 6236 1.327764 GCAGCACACGAACTATAAGGC 59.672 52.381 0.00 0.00 0.00 4.35
5583 6237 1.933853 GGCAGCACACGAACTATAAGG 59.066 52.381 0.00 0.00 0.00 2.69
5584 6238 1.588404 CGGCAGCACACGAACTATAAG 59.412 52.381 0.00 0.00 0.00 1.73
5585 6239 1.635844 CGGCAGCACACGAACTATAA 58.364 50.000 0.00 0.00 0.00 0.98
5586 6240 0.804544 GCGGCAGCACACGAACTATA 60.805 55.000 3.18 0.00 44.35 1.31
5587 6241 2.100631 GCGGCAGCACACGAACTAT 61.101 57.895 3.18 0.00 44.35 2.12
5588 6242 2.736995 GCGGCAGCACACGAACTA 60.737 61.111 3.18 0.00 44.35 2.24
5605 6259 4.320456 ACACCACGCAGCTCCCAG 62.320 66.667 0.00 0.00 0.00 4.45
5606 6260 4.624364 CACACCACGCAGCTCCCA 62.624 66.667 0.00 0.00 0.00 4.37
5609 6263 3.031964 GATGCACACCACGCAGCTC 62.032 63.158 0.00 0.00 43.88 4.09
5610 6264 3.052082 GATGCACACCACGCAGCT 61.052 61.111 0.00 0.00 43.88 4.24
5611 6265 3.052082 AGATGCACACCACGCAGC 61.052 61.111 0.00 0.00 45.93 5.25
5612 6266 2.683859 CCAGATGCACACCACGCAG 61.684 63.158 0.00 0.00 43.88 5.18
5613 6267 2.669229 CCAGATGCACACCACGCA 60.669 61.111 0.00 0.00 44.94 5.24
5614 6268 3.434319 CCCAGATGCACACCACGC 61.434 66.667 0.00 0.00 0.00 5.34
5615 6269 3.434319 GCCCAGATGCACACCACG 61.434 66.667 0.00 0.00 0.00 4.94
5616 6270 3.434319 CGCCCAGATGCACACCAC 61.434 66.667 0.00 0.00 0.00 4.16
5618 6272 6.953609 TATATATGCGCCCAGATGCACACC 62.954 50.000 4.18 0.00 45.07 4.16
5619 6273 1.168407 ATATGCGCCCAGATGCACAC 61.168 55.000 4.18 0.00 45.07 3.82
5620 6274 0.396060 TATATGCGCCCAGATGCACA 59.604 50.000 4.18 0.00 45.07 4.57
5621 6275 1.742761 ATATATGCGCCCAGATGCAC 58.257 50.000 4.18 0.00 45.07 4.57
5622 6276 2.501316 AGTATATATGCGCCCAGATGCA 59.499 45.455 4.18 0.00 46.51 3.96
5623 6277 3.185246 AGTATATATGCGCCCAGATGC 57.815 47.619 4.18 0.00 0.00 3.91
5624 6278 5.774498 TCTAGTATATATGCGCCCAGATG 57.226 43.478 4.18 0.00 0.00 2.90
5625 6279 5.182190 CGATCTAGTATATATGCGCCCAGAT 59.818 44.000 4.18 0.00 0.00 2.90
5626 6280 4.515567 CGATCTAGTATATATGCGCCCAGA 59.484 45.833 4.18 0.00 0.00 3.86
5627 6281 4.320567 CCGATCTAGTATATATGCGCCCAG 60.321 50.000 4.18 0.00 0.00 4.45
5628 6282 3.568430 CCGATCTAGTATATATGCGCCCA 59.432 47.826 4.18 0.00 0.00 5.36
5629 6283 3.057456 CCCGATCTAGTATATATGCGCCC 60.057 52.174 4.18 0.00 0.00 6.13
5630 6284 3.819337 TCCCGATCTAGTATATATGCGCC 59.181 47.826 4.18 0.00 0.00 6.53
5631 6285 5.630661 ATCCCGATCTAGTATATATGCGC 57.369 43.478 0.00 0.00 0.00 6.09
5632 6286 5.859114 GCAATCCCGATCTAGTATATATGCG 59.141 44.000 0.00 0.00 0.00 4.73
5633 6287 5.859114 CGCAATCCCGATCTAGTATATATGC 59.141 44.000 0.00 0.00 0.00 3.14
5634 6288 5.859114 GCGCAATCCCGATCTAGTATATATG 59.141 44.000 0.30 0.00 0.00 1.78
5635 6289 5.047943 GGCGCAATCCCGATCTAGTATATAT 60.048 44.000 10.83 0.00 0.00 0.86
5636 6290 4.277672 GGCGCAATCCCGATCTAGTATATA 59.722 45.833 10.83 0.00 0.00 0.86
5637 6291 3.068307 GGCGCAATCCCGATCTAGTATAT 59.932 47.826 10.83 0.00 0.00 0.86
5638 6292 2.426024 GGCGCAATCCCGATCTAGTATA 59.574 50.000 10.83 0.00 0.00 1.47
5667 6321 1.862602 GCGTTTGGACCGGCATCTTT 61.863 55.000 0.00 0.00 0.00 2.52
5669 6323 2.746277 GCGTTTGGACCGGCATCT 60.746 61.111 0.00 0.00 0.00 2.90
5696 6350 6.934083 TGATGTATACGGTGTGAATGCATATT 59.066 34.615 0.00 0.00 0.00 1.28
5711 6365 9.973246 GCCATTATTCTTTGTATGATGTATACG 57.027 33.333 0.00 0.00 43.78 3.06
5874 6528 9.822185 CTTAGGCCATTTTAATTTTGATAAGCT 57.178 29.630 5.01 0.00 0.00 3.74
6178 6834 1.344763 AGGACCTACAGTGCACTTCAC 59.655 52.381 18.94 6.28 45.98 3.18
6179 6835 1.717032 AGGACCTACAGTGCACTTCA 58.283 50.000 18.94 6.81 39.79 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.