Multiple sequence alignment - TraesCS3B01G158900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G158900 chr3B 100.000 6400 0 0 1 6400 154211975 154205576 0.000000e+00 11819
1 TraesCS3B01G158900 chr3B 82.143 252 34 8 5593 5837 530257450 530257697 8.410000e-49 206
2 TraesCS3B01G158900 chr3B 81.746 252 36 8 5592 5837 243250304 243250551 1.090000e-47 202
3 TraesCS3B01G158900 chr3A 89.524 2816 171 46 957 3712 552624894 552627645 0.000000e+00 3452
4 TraesCS3B01G158900 chr3A 90.212 991 73 11 4428 5412 552629311 552630283 0.000000e+00 1271
5 TraesCS3B01G158900 chr3A 88.009 909 76 15 1 883 552623584 552624485 0.000000e+00 1044
6 TraesCS3B01G158900 chr3A 91.690 710 46 8 3699 4403 552628623 552629324 0.000000e+00 972
7 TraesCS3B01G158900 chr3A 87.454 271 19 9 6131 6389 552630513 552630780 1.350000e-76 298
8 TraesCS3B01G158900 chr3A 83.849 291 23 12 1801 2071 552626153 552626439 8.230000e-64 255
9 TraesCS3B01G158900 chr3D 93.678 1740 82 7 1634 3346 103635255 103633517 0.000000e+00 2579
10 TraesCS3B01G158900 chr3D 94.407 1645 62 17 1 1631 103636917 103635289 0.000000e+00 2501
11 TraesCS3B01G158900 chr3D 92.548 1087 47 13 4472 5549 103632222 103631161 0.000000e+00 1528
12 TraesCS3B01G158900 chr3D 92.429 885 43 12 3541 4406 103633109 103632230 0.000000e+00 1242
13 TraesCS3B01G158900 chr3D 88.604 351 26 9 6047 6389 103631116 103630772 1.280000e-111 414
14 TraesCS3B01G158900 chr3D 95.939 197 8 0 3343 3539 103633481 103633285 2.880000e-83 320
15 TraesCS3B01G158900 chr3D 80.624 449 53 18 1642 2071 103634822 103634389 3.720000e-82 316
16 TraesCS3B01G158900 chr3D 84.848 165 21 3 5858 6018 495315203 495315039 5.130000e-36 163
17 TraesCS3B01G158900 chr3D 78.313 249 45 8 5593 5837 400274556 400274799 1.110000e-32 152
18 TraesCS3B01G158900 chr7B 90.391 281 20 3 3066 3346 152792400 152792673 4.720000e-96 363
19 TraesCS3B01G158900 chr7B 86.486 222 19 7 3376 3590 152792732 152792949 3.860000e-57 233
20 TraesCS3B01G158900 chr7B 91.608 143 11 1 5700 5841 97375152 97375010 5.060000e-46 196
21 TraesCS3B01G158900 chr7A 87.273 275 16 9 3343 3605 187105510 187105243 4.850000e-76 296
22 TraesCS3B01G158900 chr7A 91.724 145 10 1 5697 5839 105168338 105168194 3.910000e-47 200
23 TraesCS3B01G158900 chr7A 91.275 149 10 2 5697 5842 138536644 138536792 3.910000e-47 200
24 TraesCS3B01G158900 chr7A 91.608 143 11 1 5697 5838 246344229 246344371 5.060000e-46 196
25 TraesCS3B01G158900 chr7A 89.362 141 10 3 5858 5996 672717513 672717650 8.530000e-39 172
26 TraesCS3B01G158900 chr7A 88.652 141 11 4 5858 5996 672662659 672662796 3.970000e-37 167
27 TraesCS3B01G158900 chr7A 85.526 152 20 2 5857 6007 628356150 628356300 2.390000e-34 158
28 TraesCS3B01G158900 chr4B 88.770 187 21 0 3160 3346 148215037 148214851 4.990000e-56 230
29 TraesCS3B01G158900 chr5A 82.609 253 34 7 5592 5838 51547326 51547574 1.400000e-51 215
30 TraesCS3B01G158900 chr2B 92.308 143 9 1 5697 5837 255572359 255572217 1.090000e-47 202
31 TraesCS3B01G158900 chr2A 81.673 251 36 8 5593 5837 70673317 70673563 3.910000e-47 200
32 TraesCS3B01G158900 chr2A 78.800 250 41 11 5593 5837 733542345 733542587 2.390000e-34 158
33 TraesCS3B01G158900 chr2A 85.526 152 20 1 5858 6007 778130608 778130759 2.390000e-34 158
34 TraesCS3B01G158900 chr5B 86.022 186 19 5 3346 3525 695975369 695975185 6.550000e-45 193
35 TraesCS3B01G158900 chr5B 86.184 152 19 1 5858 6007 45271596 45271445 5.130000e-36 163
36 TraesCS3B01G158900 chr6B 88.816 152 15 1 5858 6007 654874617 654874768 1.100000e-42 185
37 TraesCS3B01G158900 chr6B 80.952 189 26 7 5596 5781 145045525 145045344 2.410000e-29 141
38 TraesCS3B01G158900 chr6B 86.466 133 9 6 3384 3510 553058329 553058458 3.110000e-28 137
39 TraesCS3B01G158900 chr6D 86.275 153 19 1 5858 6008 69849190 69849038 1.430000e-36 165
40 TraesCS3B01G158900 chr6D 86.184 152 19 1 5858 6007 472279119 472279270 5.130000e-36 163
41 TraesCS3B01G158900 chr6D 86.029 136 10 6 3384 3513 255019817 255019685 3.110000e-28 137
42 TraesCS3B01G158900 chr6D 86.029 136 10 6 3384 3513 368364158 368364026 3.110000e-28 137
43 TraesCS3B01G158900 chr2D 86.184 152 19 1 5862 6011 241491223 241491374 5.130000e-36 163
44 TraesCS3B01G158900 chr6A 85.621 153 18 2 5859 6007 64321666 64321514 2.390000e-34 158
45 TraesCS3B01G158900 chr6A 85.714 140 15 5 5593 5731 134548547 134548682 6.690000e-30 143
46 TraesCS3B01G158900 chr6A 86.029 136 10 6 3384 3513 509277931 509277799 3.110000e-28 137
47 TraesCS3B01G158900 chr6A 86.992 123 9 5 3393 3509 75914195 75914316 1.450000e-26 132
48 TraesCS3B01G158900 chr6A 85.385 130 10 6 3384 3507 309867076 309867202 6.740000e-25 126
49 TraesCS3B01G158900 chr7D 86.029 136 10 6 3384 3513 14549931 14549799 3.110000e-28 137
50 TraesCS3B01G158900 chr7D 86.466 133 9 6 3384 3510 184482846 184482975 3.110000e-28 137
51 TraesCS3B01G158900 chr7D 84.559 136 12 6 3384 3513 106371616 106371484 6.740000e-25 126
52 TraesCS3B01G158900 chr4A 86.029 136 10 6 3384 3513 631388453 631388321 3.110000e-28 137
53 TraesCS3B01G158900 chr4A 87.097 124 9 5 3393 3510 210994736 210994858 4.030000e-27 134
54 TraesCS3B01G158900 chr1A 84.615 143 16 5 5593 5733 580659375 580659237 3.110000e-28 137
55 TraesCS3B01G158900 chr1A 85.294 136 11 7 3384 3513 205527041 205526909 1.450000e-26 132
56 TraesCS3B01G158900 chr1B 85.294 136 11 6 3384 3513 143630825 143630693 1.450000e-26 132


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G158900 chr3B 154205576 154211975 6399 True 11819.000000 11819 100.000000 1 6400 1 chr3B.!!$R1 6399
1 TraesCS3B01G158900 chr3A 552623584 552630780 7196 False 1215.333333 3452 88.456333 1 6389 6 chr3A.!!$F1 6388
2 TraesCS3B01G158900 chr3D 103630772 103636917 6145 True 1271.428571 2579 91.175571 1 6389 7 chr3D.!!$R2 6388
3 TraesCS3B01G158900 chr7B 152792400 152792949 549 False 298.000000 363 88.438500 3066 3590 2 chr7B.!!$F1 524

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
980 1346 1.066071 GTCACTAGGGTTTCTGCTCCC 60.066 57.143 0.00 0.00 43.71 4.30 F
1669 2069 0.320374 TGGTAAGTGACTGAAGCGGG 59.680 55.000 0.00 0.00 0.00 6.13 F
3078 3499 1.001520 TGTTACTTAAGCGCTGAGGCA 59.998 47.619 12.58 10.37 38.60 4.75 F
3518 4006 0.036388 GCCCATCTCTCGGTGTTTCA 60.036 55.000 0.00 0.00 0.00 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2347 2752 1.066908 CCTCAGCTCTCCATCGTTCTC 59.933 57.143 0.00 0.0 0.0 2.87 R
3103 3524 0.833287 ATGTCTAAGGCAGTGCGGAT 59.167 50.000 9.45 0.0 0.0 4.18 R
4467 6141 0.033228 CGGGCCAAAAATTCACAGCA 59.967 50.000 4.39 0.0 0.0 4.41 R
5508 7216 0.039618 ATCCTTGGGGCGAAACACAT 59.960 50.000 0.00 0.0 0.0 3.21 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 9.965902 AGTAAGAGAACAAAGTCATTCCATATT 57.034 29.630 0.00 0.00 0.00 1.28
166 167 8.212995 TGCTTCATTCTCCATACAAATCATAGA 58.787 33.333 0.00 0.00 0.00 1.98
173 188 6.000246 TCCATACAAATCATAGAACCTGCA 58.000 37.500 0.00 0.00 0.00 4.41
175 190 7.062322 TCCATACAAATCATAGAACCTGCATT 58.938 34.615 0.00 0.00 0.00 3.56
201 216 3.694566 GACCTAACTAACCCCAAATGCAG 59.305 47.826 0.00 0.00 0.00 4.41
207 222 4.781934 ACTAACCCCAAATGCAGAGATAC 58.218 43.478 0.00 0.00 0.00 2.24
208 223 4.475016 ACTAACCCCAAATGCAGAGATACT 59.525 41.667 0.00 0.00 0.00 2.12
214 229 6.064060 CCCCAAATGCAGAGATACTAAATCA 58.936 40.000 0.00 0.00 0.00 2.57
218 233 8.461222 CCAAATGCAGAGATACTAAATCACAAA 58.539 33.333 0.00 0.00 0.00 2.83
219 234 9.844790 CAAATGCAGAGATACTAAATCACAAAA 57.155 29.630 0.00 0.00 0.00 2.44
288 311 3.505680 TCACGTTAGCATTGCTTGGAAAT 59.494 39.130 17.71 0.00 40.44 2.17
520 543 3.006728 TTGAAGGACCGGCGGGAT 61.007 61.111 31.78 10.45 36.97 3.85
547 570 1.152819 CCGGATCTACACTCGGGGA 60.153 63.158 0.00 0.00 38.93 4.81
643 666 1.403780 GCCGCGAAGTAGGAGAAGAAA 60.404 52.381 8.23 0.00 0.00 2.52
790 813 5.115480 TCCATTTTGCCTGTTTCAACTTTC 58.885 37.500 0.00 0.00 0.00 2.62
792 815 5.006941 CCATTTTGCCTGTTTCAACTTTCTG 59.993 40.000 0.00 0.00 0.00 3.02
793 816 5.398603 TTTTGCCTGTTTCAACTTTCTGA 57.601 34.783 0.00 0.00 0.00 3.27
794 817 4.370364 TTGCCTGTTTCAACTTTCTGAC 57.630 40.909 0.00 0.00 0.00 3.51
796 819 2.034685 GCCTGTTTCAACTTTCTGACCC 59.965 50.000 0.00 0.00 0.00 4.46
797 820 2.290641 CCTGTTTCAACTTTCTGACCCG 59.709 50.000 0.00 0.00 0.00 5.28
798 821 2.290641 CTGTTTCAACTTTCTGACCCGG 59.709 50.000 0.00 0.00 0.00 5.73
799 822 2.092861 TGTTTCAACTTTCTGACCCGGA 60.093 45.455 0.73 0.00 0.00 5.14
940 965 1.600023 TAAACCCAAAGCCACACTCG 58.400 50.000 0.00 0.00 0.00 4.18
980 1346 1.066071 GTCACTAGGGTTTCTGCTCCC 60.066 57.143 0.00 0.00 43.71 4.30
1608 1977 2.888414 TGTGGCGTCGGATTCATATAGA 59.112 45.455 0.00 0.00 0.00 1.98
1632 2001 9.083422 AGATGTGTATGTCTACTATGCTTATGT 57.917 33.333 0.00 0.00 0.00 2.29
1639 2039 7.827819 TGTCTACTATGCTTATGTGTTGTTC 57.172 36.000 0.00 0.00 0.00 3.18
1669 2069 0.320374 TGGTAAGTGACTGAAGCGGG 59.680 55.000 0.00 0.00 0.00 6.13
1690 2090 4.941873 GGGTCAGTGTACAAAGAATTAGGG 59.058 45.833 0.00 0.00 0.00 3.53
1712 2112 6.100279 AGGGATCATGTATGTCTTGTATGTGT 59.900 38.462 0.00 0.00 0.00 3.72
1717 2117 6.598850 TCATGTATGTCTTGTATGTGTTGCAT 59.401 34.615 0.00 0.00 41.42 3.96
1938 2339 4.350368 TGTAAAAGAGTGATGGACAGCA 57.650 40.909 0.00 0.00 0.00 4.41
2084 2488 6.757897 ACACATTAACTGATTGGTATGTGG 57.242 37.500 15.03 1.33 41.49 4.17
2200 2605 1.590679 CGATTCGCTGATGCAGTTTCG 60.591 52.381 0.00 0.00 39.64 3.46
2214 2619 3.242248 GCAGTTTCGACATACCGTGATAC 59.758 47.826 0.00 0.00 0.00 2.24
2216 2621 4.499399 CAGTTTCGACATACCGTGATACAG 59.501 45.833 0.00 0.00 0.00 2.74
2220 2625 2.534349 CGACATACCGTGATACAGTTGC 59.466 50.000 0.00 0.00 0.00 4.17
2347 2752 8.975439 GTCCAAATACCAATCGTACTATGTAAG 58.025 37.037 0.00 0.00 0.00 2.34
2473 2880 2.675348 GCTATTGCTGACTCTGACCAAC 59.325 50.000 0.00 0.00 36.03 3.77
2558 2965 1.444250 GTGGTTCGGGCCATCGATA 59.556 57.895 4.39 0.00 41.08 2.92
2586 2993 2.887152 GTGCTGACCTTGTGGAAATCTT 59.113 45.455 0.00 0.00 37.04 2.40
2648 3055 8.405531 ACAGATTTTATGATGTTTATTGTCCGG 58.594 33.333 0.00 0.00 0.00 5.14
2651 3058 7.704578 TTTTATGATGTTTATTGTCCGGGAA 57.295 32.000 0.00 0.00 0.00 3.97
2698 3105 7.650104 CGTACCAATTGTTACAAAAGAACCATT 59.350 33.333 12.89 0.00 0.00 3.16
2746 3153 9.391006 AGTGTTACAGTTCTCTTGTTATTTCAA 57.609 29.630 0.00 0.00 0.00 2.69
2870 3283 9.685828 TTTGTTGGTTTTGTGATAGCTTATTAC 57.314 29.630 0.00 0.00 0.00 1.89
2955 3368 7.040478 CGATGGATTTATTTCTGCCCAAGAATA 60.040 37.037 0.00 0.00 44.46 1.75
2984 3405 4.604843 TCTATGCTTTCTCATTTGTGCG 57.395 40.909 0.00 0.00 0.00 5.34
3013 3434 8.141909 TGTCATACAGATACCTACATTTAGTGC 58.858 37.037 0.00 0.00 0.00 4.40
3078 3499 1.001520 TGTTACTTAAGCGCTGAGGCA 59.998 47.619 12.58 10.37 38.60 4.75
3130 3554 3.123621 CACTGCCTTAGACATGAAACGTC 59.876 47.826 0.00 0.00 0.00 4.34
3172 3596 4.116747 CCACTGTTGTCAGAGGTATCTC 57.883 50.000 0.00 0.00 43.91 2.75
3207 3650 1.638388 CGCTGCATCATCGTTGTGGT 61.638 55.000 0.00 0.00 0.00 4.16
3257 3700 2.204090 ATCCCCCAACACTCCGGT 60.204 61.111 0.00 0.00 0.00 5.28
3317 3760 1.957177 CTTGCCGGATCTACTCTGCTA 59.043 52.381 5.05 0.00 0.00 3.49
3334 3777 4.723789 TCTGCTATTGAGGAAGAAGGGATT 59.276 41.667 0.00 0.00 0.00 3.01
3365 3847 2.956333 GGAGTTTTAGGGTTGTGTGCTT 59.044 45.455 0.00 0.00 0.00 3.91
3419 3901 0.614979 GGCTGTGGTGAGGTAGGAGA 60.615 60.000 0.00 0.00 0.00 3.71
3450 3932 2.262637 AGTGGAATTAGGTCACGGGAA 58.737 47.619 0.00 0.00 36.60 3.97
3457 3945 1.835494 TAGGTCACGGGAAGAGTCTG 58.165 55.000 0.00 0.00 0.00 3.51
3513 4001 1.043116 TAGTGGCCCATCTCTCGGTG 61.043 60.000 0.00 0.00 0.00 4.94
3518 4006 0.036388 GCCCATCTCTCGGTGTTTCA 60.036 55.000 0.00 0.00 0.00 2.69
3605 4267 0.248377 CCTTACCGTCTCGCCTTACG 60.248 60.000 0.00 0.00 45.62 3.18
3625 4287 3.244422 ACGTTAGGAGGTTGAGCAATGAA 60.244 43.478 0.00 0.00 0.00 2.57
3686 4351 7.007116 ACCTTATGTAGATCTGCATCTAGACA 58.993 38.462 26.94 11.00 41.50 3.41
3689 4354 9.926158 CTTATGTAGATCTGCATCTAGACATTT 57.074 33.333 26.94 5.62 41.50 2.32
3715 4388 9.736414 TGATGTAGTATATAGTCAGACCTAACC 57.264 37.037 0.00 0.00 0.00 2.85
3716 4389 9.176460 GATGTAGTATATAGTCAGACCTAACCC 57.824 40.741 0.00 0.00 0.00 4.11
3717 4390 7.465116 TGTAGTATATAGTCAGACCTAACCCC 58.535 42.308 0.00 0.00 0.00 4.95
3718 4391 6.800223 AGTATATAGTCAGACCTAACCCCT 57.200 41.667 0.00 0.00 0.00 4.79
3719 4392 6.553857 AGTATATAGTCAGACCTAACCCCTG 58.446 44.000 0.00 0.00 0.00 4.45
3720 4393 2.544844 TAGTCAGACCTAACCCCTGG 57.455 55.000 0.00 0.00 0.00 4.45
3722 4395 1.366435 AGTCAGACCTAACCCCTGGAT 59.634 52.381 0.00 0.00 0.00 3.41
3723 4396 2.590611 AGTCAGACCTAACCCCTGGATA 59.409 50.000 0.00 0.00 0.00 2.59
3724 4397 3.013648 AGTCAGACCTAACCCCTGGATAA 59.986 47.826 0.00 0.00 0.00 1.75
3731 5398 3.902467 CCTAACCCCTGGATAAGACCTAC 59.098 52.174 0.00 0.00 0.00 3.18
3737 5404 3.833070 CCCTGGATAAGACCTACGCTATT 59.167 47.826 0.00 0.00 0.00 1.73
3744 5411 2.618053 AGACCTACGCTATTGTTGCAC 58.382 47.619 0.00 0.00 0.00 4.57
3752 5419 2.223112 CGCTATTGTTGCACATGGAGAC 60.223 50.000 0.00 0.00 0.00 3.36
3787 5454 7.186972 ACATATCAATAAGATTGCATCCCCAT 58.813 34.615 0.00 0.00 38.19 4.00
3799 5466 0.258774 ATCCCCATGGTGCCAGTTAC 59.741 55.000 11.73 0.00 0.00 2.50
3802 5469 0.038166 CCCATGGTGCCAGTTACACT 59.962 55.000 11.73 0.00 38.14 3.55
3816 5483 6.234177 CCAGTTACACTCCTCTCATCTTTTT 58.766 40.000 0.00 0.00 0.00 1.94
3837 5504 8.589335 TTTTTAGCTTCCGATATACAGACATC 57.411 34.615 0.00 0.00 0.00 3.06
3985 5652 1.558294 TGTCTGATCATGCTCCTTGCT 59.442 47.619 0.00 0.00 43.37 3.91
4141 5808 3.996150 ACTGAATTGTTTGAGCACTGG 57.004 42.857 0.00 0.00 0.00 4.00
4146 5813 4.887071 TGAATTGTTTGAGCACTGGTACTT 59.113 37.500 0.00 0.00 0.00 2.24
4147 5814 6.058833 TGAATTGTTTGAGCACTGGTACTTA 58.941 36.000 0.00 0.00 0.00 2.24
4148 5815 6.714810 TGAATTGTTTGAGCACTGGTACTTAT 59.285 34.615 0.00 0.00 0.00 1.73
4149 5816 7.880713 TGAATTGTTTGAGCACTGGTACTTATA 59.119 33.333 0.00 0.00 0.00 0.98
4150 5817 8.630054 AATTGTTTGAGCACTGGTACTTATAA 57.370 30.769 0.00 0.00 0.00 0.98
4256 5930 5.531287 GTGTATCCTCAAAAACTTGGAGTGT 59.469 40.000 0.00 0.00 31.59 3.55
4289 5963 5.239306 TCTGTCTGCAAATACCACTTCAAAG 59.761 40.000 0.00 0.00 0.00 2.77
4453 6127 5.078411 ACAAATCCAGCTGTGAGTAGTAG 57.922 43.478 13.81 3.62 0.00 2.57
4467 6141 7.497595 TGTGAGTAGTAGTTCATTCAAGTTGT 58.502 34.615 2.11 0.00 0.00 3.32
4486 6160 0.033228 TGCTGTGAATTTTTGGCCCG 59.967 50.000 0.00 0.00 0.00 6.13
4533 6207 5.140177 GTCATTTGTGTTTCTTGAGCTACG 58.860 41.667 0.00 0.00 0.00 3.51
4534 6208 3.602390 TTTGTGTTTCTTGAGCTACGC 57.398 42.857 0.00 0.00 0.00 4.42
4535 6209 2.232756 TGTGTTTCTTGAGCTACGCA 57.767 45.000 0.00 0.00 0.00 5.24
4536 6210 1.864711 TGTGTTTCTTGAGCTACGCAC 59.135 47.619 0.00 0.00 0.00 5.34
4583 6257 6.276091 TGTGACAAGATAGATACATGCAGTC 58.724 40.000 0.00 0.00 0.00 3.51
4633 6309 7.907389 AGTTTAGATAGTCTGAAACACATGGA 58.093 34.615 0.00 0.00 34.85 3.41
4642 6318 4.161377 TCTGAAACACATGGATGTATCGGA 59.839 41.667 0.00 0.53 39.39 4.55
4645 6321 4.487714 AACACATGGATGTATCGGAAGT 57.512 40.909 0.00 0.00 39.39 3.01
4797 6474 3.933861 AACAGTTCCTTCTGTGGTCTT 57.066 42.857 0.10 0.00 46.25 3.01
4907 6584 1.140652 TGACACAGTGCCTTGATGTGA 59.859 47.619 11.19 0.00 45.67 3.58
4948 6625 8.694540 CATCAATTATTTTATGTGGGACCTTGA 58.305 33.333 0.00 0.00 0.00 3.02
5011 6689 3.645687 TGCAAAATTCCACTTTAAGGCCT 59.354 39.130 0.00 0.00 0.00 5.19
5015 6693 0.322187 TTCCACTTTAAGGCCTCCGC 60.322 55.000 5.23 0.00 0.00 5.54
5065 6747 5.759506 TCGCTGATTTGTGTTTCCTTTTA 57.240 34.783 0.00 0.00 0.00 1.52
5096 6778 0.376152 GCCGTCATGATGCACAGAAG 59.624 55.000 9.58 0.00 0.00 2.85
5099 6781 1.456296 GTCATGATGCACAGAAGGCA 58.544 50.000 0.00 0.00 46.66 4.75
5114 6796 3.354678 GCACTCGCCAAACATGGT 58.645 55.556 0.00 0.00 0.00 3.55
5173 6855 2.369633 TGGATCCATGGCAGCGACT 61.370 57.895 11.44 0.00 0.00 4.18
5233 6915 1.810151 CATGTCGGTTCCATTTCCGTT 59.190 47.619 3.64 0.00 45.88 4.44
5400 7082 3.270877 GACGTGATGTTTGGCCTCTAAT 58.729 45.455 3.32 0.00 0.00 1.73
5438 7146 2.151202 TCAAGGCAAAACGAGGATCAC 58.849 47.619 0.00 0.00 33.17 3.06
5441 7149 1.347707 AGGCAAAACGAGGATCACTGA 59.652 47.619 0.00 0.00 33.17 3.41
5444 7152 4.130118 GGCAAAACGAGGATCACTGATAT 58.870 43.478 0.00 0.00 33.17 1.63
5446 7154 5.406780 GGCAAAACGAGGATCACTGATATAG 59.593 44.000 0.00 0.00 33.17 1.31
5447 7155 6.216569 GCAAAACGAGGATCACTGATATAGA 58.783 40.000 0.00 0.00 33.17 1.98
5449 7157 7.148672 GCAAAACGAGGATCACTGATATAGATG 60.149 40.741 0.00 0.00 33.17 2.90
5450 7158 6.522625 AACGAGGATCACTGATATAGATGG 57.477 41.667 0.00 0.00 33.17 3.51
5451 7159 4.400884 ACGAGGATCACTGATATAGATGGC 59.599 45.833 0.00 0.00 33.17 4.40
5452 7160 4.400567 CGAGGATCACTGATATAGATGGCA 59.599 45.833 0.00 0.00 33.17 4.92
5453 7161 5.659463 GAGGATCACTGATATAGATGGCAC 58.341 45.833 0.00 0.00 33.17 5.01
5502 7210 1.452110 CTTCCGTTGATGTGATGCCA 58.548 50.000 0.00 0.00 0.00 4.92
5508 7216 3.128415 CCGTTGATGTGATGCCATTACAA 59.872 43.478 6.37 0.00 32.26 2.41
5525 7233 0.038343 CAATGTGTTTCGCCCCAAGG 60.038 55.000 0.00 0.00 0.00 3.61
5549 7257 6.879458 GGATTAGAAGTTGTGGAGTTACATGT 59.121 38.462 2.69 2.69 0.00 3.21
5550 7258 7.064728 GGATTAGAAGTTGTGGAGTTACATGTC 59.935 40.741 0.00 0.00 0.00 3.06
5551 7259 4.307432 AGAAGTTGTGGAGTTACATGTCG 58.693 43.478 0.00 0.00 0.00 4.35
5552 7260 2.413837 AGTTGTGGAGTTACATGTCGC 58.586 47.619 0.00 0.00 0.00 5.19
5553 7261 1.463444 GTTGTGGAGTTACATGTCGCC 59.537 52.381 0.00 0.19 0.00 5.54
5554 7262 0.036765 TGTGGAGTTACATGTCGCCC 60.037 55.000 0.00 0.28 0.00 6.13
5555 7263 0.743345 GTGGAGTTACATGTCGCCCC 60.743 60.000 0.00 0.68 0.00 5.80
5556 7264 1.195442 TGGAGTTACATGTCGCCCCA 61.195 55.000 0.00 3.63 0.00 4.96
5559 7267 0.035439 AGTTACATGTCGCCCCAAGG 60.035 55.000 0.00 0.00 0.00 3.61
5560 7268 0.035820 GTTACATGTCGCCCCAAGGA 60.036 55.000 0.00 0.00 33.47 3.36
5561 7269 0.916086 TTACATGTCGCCCCAAGGAT 59.084 50.000 0.00 0.00 33.47 3.24
5562 7270 0.916086 TACATGTCGCCCCAAGGATT 59.084 50.000 0.00 0.00 33.47 3.01
5564 7272 1.134098 ACATGTCGCCCCAAGGATTAG 60.134 52.381 0.00 0.00 33.47 1.73
5565 7273 1.140852 CATGTCGCCCCAAGGATTAGA 59.859 52.381 0.00 0.00 33.47 2.10
5567 7275 1.209504 TGTCGCCCCAAGGATTAGAAG 59.790 52.381 0.00 0.00 33.47 2.85
5569 7278 2.433239 GTCGCCCCAAGGATTAGAAGTA 59.567 50.000 0.00 0.00 33.47 2.24
5578 7287 5.132816 CCAAGGATTAGAAGTATCCCTGGTT 59.867 44.000 10.18 0.00 43.99 3.67
5580 7289 6.910259 AGGATTAGAAGTATCCCTGGTTTT 57.090 37.500 0.00 0.00 42.12 2.43
5581 7290 6.663734 AGGATTAGAAGTATCCCTGGTTTTG 58.336 40.000 0.00 0.00 42.12 2.44
5582 7291 5.299531 GGATTAGAAGTATCCCTGGTTTTGC 59.700 44.000 0.00 0.00 36.38 3.68
5592 7301 0.113190 CTGGTTTTGCCCTCCCTTCT 59.887 55.000 0.00 0.00 36.04 2.85
5593 7302 1.354368 CTGGTTTTGCCCTCCCTTCTA 59.646 52.381 0.00 0.00 36.04 2.10
5594 7303 1.074889 TGGTTTTGCCCTCCCTTCTAC 59.925 52.381 0.00 0.00 36.04 2.59
5595 7304 1.354705 GGTTTTGCCCTCCCTTCTACT 59.645 52.381 0.00 0.00 0.00 2.57
5596 7305 2.618302 GGTTTTGCCCTCCCTTCTACTC 60.618 54.545 0.00 0.00 0.00 2.59
5597 7306 1.286248 TTTGCCCTCCCTTCTACTCC 58.714 55.000 0.00 0.00 0.00 3.85
5598 7307 0.620700 TTGCCCTCCCTTCTACTCCC 60.621 60.000 0.00 0.00 0.00 4.30
5599 7308 1.315216 GCCCTCCCTTCTACTCCCT 59.685 63.158 0.00 0.00 0.00 4.20
5600 7309 0.761323 GCCCTCCCTTCTACTCCCTC 60.761 65.000 0.00 0.00 0.00 4.30
5601 7310 0.468400 CCCTCCCTTCTACTCCCTCG 60.468 65.000 0.00 0.00 0.00 4.63
5602 7311 0.468400 CCTCCCTTCTACTCCCTCGG 60.468 65.000 0.00 0.00 0.00 4.63
5603 7312 0.259356 CTCCCTTCTACTCCCTCGGT 59.741 60.000 0.00 0.00 0.00 4.69
5604 7313 0.708802 TCCCTTCTACTCCCTCGGTT 59.291 55.000 0.00 0.00 0.00 4.44
5605 7314 1.112950 CCCTTCTACTCCCTCGGTTC 58.887 60.000 0.00 0.00 0.00 3.62
5606 7315 1.112950 CCTTCTACTCCCTCGGTTCC 58.887 60.000 0.00 0.00 0.00 3.62
5607 7316 1.342175 CCTTCTACTCCCTCGGTTCCT 60.342 57.143 0.00 0.00 0.00 3.36
5608 7317 2.091994 CCTTCTACTCCCTCGGTTCCTA 60.092 54.545 0.00 0.00 0.00 2.94
5609 7318 3.626729 CCTTCTACTCCCTCGGTTCCTAA 60.627 52.174 0.00 0.00 0.00 2.69
5610 7319 3.744940 TCTACTCCCTCGGTTCCTAAA 57.255 47.619 0.00 0.00 0.00 1.85
5611 7320 4.261411 TCTACTCCCTCGGTTCCTAAAT 57.739 45.455 0.00 0.00 0.00 1.40
5612 7321 5.393068 TCTACTCCCTCGGTTCCTAAATA 57.607 43.478 0.00 0.00 0.00 1.40
5613 7322 5.136105 TCTACTCCCTCGGTTCCTAAATAC 58.864 45.833 0.00 0.00 0.00 1.89
5614 7323 3.991683 ACTCCCTCGGTTCCTAAATACT 58.008 45.455 0.00 0.00 0.00 2.12
5615 7324 3.959449 ACTCCCTCGGTTCCTAAATACTC 59.041 47.826 0.00 0.00 0.00 2.59
5616 7325 3.303049 TCCCTCGGTTCCTAAATACTCC 58.697 50.000 0.00 0.00 0.00 3.85
5617 7326 2.367894 CCCTCGGTTCCTAAATACTCCC 59.632 54.545 0.00 0.00 0.00 4.30
5618 7327 3.306613 CCTCGGTTCCTAAATACTCCCT 58.693 50.000 0.00 0.00 0.00 4.20
5619 7328 3.321396 CCTCGGTTCCTAAATACTCCCTC 59.679 52.174 0.00 0.00 0.00 4.30
5620 7329 4.216708 CTCGGTTCCTAAATACTCCCTCT 58.783 47.826 0.00 0.00 0.00 3.69
5621 7330 3.958798 TCGGTTCCTAAATACTCCCTCTG 59.041 47.826 0.00 0.00 0.00 3.35
5622 7331 3.705072 CGGTTCCTAAATACTCCCTCTGT 59.295 47.826 0.00 0.00 0.00 3.41
5623 7332 4.891756 CGGTTCCTAAATACTCCCTCTGTA 59.108 45.833 0.00 0.00 0.00 2.74
5624 7333 5.361857 CGGTTCCTAAATACTCCCTCTGTAA 59.638 44.000 0.00 0.00 0.00 2.41
5625 7334 6.127253 CGGTTCCTAAATACTCCCTCTGTAAA 60.127 42.308 0.00 0.00 0.00 2.01
5626 7335 7.046652 GGTTCCTAAATACTCCCTCTGTAAAC 58.953 42.308 0.00 0.00 0.00 2.01
5627 7336 7.092979 GGTTCCTAAATACTCCCTCTGTAAACT 60.093 40.741 0.00 0.00 0.00 2.66
5628 7337 8.975295 GTTCCTAAATACTCCCTCTGTAAACTA 58.025 37.037 0.00 0.00 0.00 2.24
5629 7338 9.551339 TTCCTAAATACTCCCTCTGTAAACTAA 57.449 33.333 0.00 0.00 0.00 2.24
5630 7339 9.725206 TCCTAAATACTCCCTCTGTAAACTAAT 57.275 33.333 0.00 0.00 0.00 1.73
5638 7347 9.939424 ACTCCCTCTGTAAACTAATATAAGAGT 57.061 33.333 0.00 0.00 0.00 3.24
5640 7349 9.710818 TCCCTCTGTAAACTAATATAAGAGTGT 57.289 33.333 0.00 0.00 0.00 3.55
5660 7369 9.672673 AGAGTGTTTGCATCATTATAAAGTAGT 57.327 29.630 0.00 0.00 0.00 2.73
5661 7370 9.708222 GAGTGTTTGCATCATTATAAAGTAGTG 57.292 33.333 0.00 0.00 0.00 2.74
5662 7371 9.448438 AGTGTTTGCATCATTATAAAGTAGTGA 57.552 29.630 0.00 0.00 0.00 3.41
5694 7403 9.750783 ACGCTCTTATATTAGTTTATAGAGGGA 57.249 33.333 16.73 0.00 37.30 4.20
5707 7416 9.287373 AGTTTATAGAGGGAGTATAAGTCTTCG 57.713 37.037 0.00 0.00 0.00 3.79
5708 7417 7.684937 TTATAGAGGGAGTATAAGTCTTCGC 57.315 40.000 0.00 0.00 0.00 4.70
5709 7418 3.899726 AGAGGGAGTATAAGTCTTCGCA 58.100 45.455 0.00 0.00 0.00 5.10
5710 7419 3.886505 AGAGGGAGTATAAGTCTTCGCAG 59.113 47.826 0.00 0.00 0.00 5.18
5711 7420 3.884091 GAGGGAGTATAAGTCTTCGCAGA 59.116 47.826 0.00 0.00 0.00 4.26
5712 7421 3.886505 AGGGAGTATAAGTCTTCGCAGAG 59.113 47.826 0.00 0.00 38.43 3.35
5713 7422 3.884091 GGGAGTATAAGTCTTCGCAGAGA 59.116 47.826 0.00 0.00 38.43 3.10
5714 7423 4.521256 GGGAGTATAAGTCTTCGCAGAGAT 59.479 45.833 0.00 0.00 38.43 2.75
5715 7424 5.010213 GGGAGTATAAGTCTTCGCAGAGATT 59.990 44.000 0.00 0.00 38.43 2.40
5716 7425 6.461788 GGGAGTATAAGTCTTCGCAGAGATTT 60.462 42.308 0.00 0.86 38.43 2.17
5717 7426 6.639279 GGAGTATAAGTCTTCGCAGAGATTTC 59.361 42.308 0.00 0.00 38.43 2.17
5718 7427 7.101652 AGTATAAGTCTTCGCAGAGATTTCA 57.898 36.000 0.00 0.00 38.43 2.69
5719 7428 6.975772 AGTATAAGTCTTCGCAGAGATTTCAC 59.024 38.462 0.00 0.25 38.43 3.18
5720 7429 3.951775 AGTCTTCGCAGAGATTTCACT 57.048 42.857 0.00 0.00 38.43 3.41
5721 7430 5.392767 AAGTCTTCGCAGAGATTTCACTA 57.607 39.130 0.00 0.00 38.43 2.74
5722 7431 5.590530 AGTCTTCGCAGAGATTTCACTAT 57.409 39.130 0.00 0.00 38.43 2.12
5723 7432 6.701145 AGTCTTCGCAGAGATTTCACTATA 57.299 37.500 0.00 0.00 38.43 1.31
5724 7433 7.101652 AGTCTTCGCAGAGATTTCACTATAA 57.898 36.000 0.00 0.00 38.43 0.98
5725 7434 7.548097 AGTCTTCGCAGAGATTTCACTATAAA 58.452 34.615 0.00 0.00 38.43 1.40
5726 7435 7.489757 AGTCTTCGCAGAGATTTCACTATAAAC 59.510 37.037 0.00 0.00 38.43 2.01
5727 7436 7.489757 GTCTTCGCAGAGATTTCACTATAAACT 59.510 37.037 0.00 0.00 38.43 2.66
5728 7437 8.683615 TCTTCGCAGAGATTTCACTATAAACTA 58.316 33.333 0.00 0.00 38.43 2.24
5729 7438 8.630278 TTCGCAGAGATTTCACTATAAACTAC 57.370 34.615 0.00 0.00 38.43 2.73
5730 7439 7.768240 TCGCAGAGATTTCACTATAAACTACA 58.232 34.615 0.00 0.00 0.00 2.74
5731 7440 8.414003 TCGCAGAGATTTCACTATAAACTACAT 58.586 33.333 0.00 0.00 0.00 2.29
5732 7441 9.678941 CGCAGAGATTTCACTATAAACTACATA 57.321 33.333 0.00 0.00 0.00 2.29
5747 7456 7.944729 AAACTACATATGGAGCAAAATGAGT 57.055 32.000 15.30 0.00 0.00 3.41
5748 7457 6.932356 ACTACATATGGAGCAAAATGAGTG 57.068 37.500 15.30 0.00 0.00 3.51
5749 7458 6.653020 ACTACATATGGAGCAAAATGAGTGA 58.347 36.000 15.30 0.00 0.00 3.41
5750 7459 7.112122 ACTACATATGGAGCAAAATGAGTGAA 58.888 34.615 15.30 0.00 0.00 3.18
5751 7460 7.776969 ACTACATATGGAGCAAAATGAGTGAAT 59.223 33.333 15.30 0.00 0.00 2.57
5752 7461 7.035840 ACATATGGAGCAAAATGAGTGAATC 57.964 36.000 7.80 0.00 0.00 2.52
5753 7462 6.832384 ACATATGGAGCAAAATGAGTGAATCT 59.168 34.615 7.80 0.00 0.00 2.40
5754 7463 7.994911 ACATATGGAGCAAAATGAGTGAATCTA 59.005 33.333 7.80 0.00 0.00 1.98
5755 7464 6.690194 ATGGAGCAAAATGAGTGAATCTAC 57.310 37.500 0.00 0.00 0.00 2.59
5756 7465 5.559770 TGGAGCAAAATGAGTGAATCTACA 58.440 37.500 0.00 0.00 0.00 2.74
5757 7466 5.412594 TGGAGCAAAATGAGTGAATCTACAC 59.587 40.000 0.00 0.00 40.60 2.90
5780 7489 9.371136 ACACTAAAATGCATCTATATACATCCG 57.629 33.333 0.00 0.00 0.00 4.18
5781 7490 9.371136 CACTAAAATGCATCTATATACATCCGT 57.629 33.333 0.00 0.00 0.00 4.69
5782 7491 9.371136 ACTAAAATGCATCTATATACATCCGTG 57.629 33.333 0.00 0.00 0.00 4.94
5783 7492 9.371136 CTAAAATGCATCTATATACATCCGTGT 57.629 33.333 0.00 0.00 42.39 4.49
5784 7493 7.601073 AAATGCATCTATATACATCCGTGTG 57.399 36.000 0.00 0.00 39.39 3.82
5785 7494 5.722021 TGCATCTATATACATCCGTGTGT 57.278 39.130 0.00 0.00 39.39 3.72
5786 7495 5.469479 TGCATCTATATACATCCGTGTGTG 58.531 41.667 0.66 0.00 39.39 3.82
5787 7496 4.864806 GCATCTATATACATCCGTGTGTGG 59.135 45.833 0.66 0.00 39.39 4.17
5788 7497 5.566826 GCATCTATATACATCCGTGTGTGGT 60.567 44.000 0.66 0.00 39.39 4.16
5789 7498 6.455647 CATCTATATACATCCGTGTGTGGTT 58.544 40.000 0.66 0.00 39.39 3.67
5790 7499 6.080648 TCTATATACATCCGTGTGTGGTTC 57.919 41.667 0.66 0.00 39.39 3.62
5791 7500 4.746535 ATATACATCCGTGTGTGGTTCA 57.253 40.909 0.66 0.00 39.39 3.18
5792 7501 3.627395 ATACATCCGTGTGTGGTTCAT 57.373 42.857 0.66 0.00 39.39 2.57
5793 7502 4.746535 ATACATCCGTGTGTGGTTCATA 57.253 40.909 0.66 0.00 39.39 2.15
5794 7503 2.972625 ACATCCGTGTGTGGTTCATAG 58.027 47.619 0.00 0.00 37.14 2.23
5795 7504 2.301870 ACATCCGTGTGTGGTTCATAGT 59.698 45.455 0.00 0.00 37.14 2.12
5796 7505 2.448926 TCCGTGTGTGGTTCATAGTG 57.551 50.000 0.00 0.00 0.00 2.74
5797 7506 1.964933 TCCGTGTGTGGTTCATAGTGA 59.035 47.619 0.00 0.00 0.00 3.41
5798 7507 2.365941 TCCGTGTGTGGTTCATAGTGAA 59.634 45.455 0.00 0.00 33.32 3.18
5799 7508 3.135225 CCGTGTGTGGTTCATAGTGAAA 58.865 45.455 0.00 0.00 38.22 2.69
5800 7509 3.751175 CCGTGTGTGGTTCATAGTGAAAT 59.249 43.478 0.00 0.00 38.22 2.17
5801 7510 4.142902 CCGTGTGTGGTTCATAGTGAAATC 60.143 45.833 0.00 0.00 38.22 2.17
5802 7511 4.690748 CGTGTGTGGTTCATAGTGAAATCT 59.309 41.667 0.00 0.00 38.22 2.40
5803 7512 5.163953 CGTGTGTGGTTCATAGTGAAATCTC 60.164 44.000 0.00 0.00 38.22 2.75
5804 7513 5.934625 GTGTGTGGTTCATAGTGAAATCTCT 59.065 40.000 0.00 0.00 38.22 3.10
5805 7514 7.097192 GTGTGTGGTTCATAGTGAAATCTCTA 58.903 38.462 0.00 0.00 38.22 2.43
5806 7515 7.063544 GTGTGTGGTTCATAGTGAAATCTCTAC 59.936 40.741 0.00 0.00 38.22 2.59
5807 7516 6.535508 GTGTGGTTCATAGTGAAATCTCTACC 59.464 42.308 0.00 0.00 38.22 3.18
5808 7517 6.212589 TGTGGTTCATAGTGAAATCTCTACCA 59.787 38.462 0.00 0.00 38.22 3.25
5809 7518 7.103641 GTGGTTCATAGTGAAATCTCTACCAA 58.896 38.462 0.00 0.00 38.22 3.67
5810 7519 7.278868 GTGGTTCATAGTGAAATCTCTACCAAG 59.721 40.741 0.00 0.00 38.22 3.61
5811 7520 7.180229 TGGTTCATAGTGAAATCTCTACCAAGA 59.820 37.037 0.00 0.00 38.22 3.02
5812 7521 7.492994 GGTTCATAGTGAAATCTCTACCAAGAC 59.507 40.741 0.00 0.00 38.22 3.01
5813 7522 7.962995 TCATAGTGAAATCTCTACCAAGACT 57.037 36.000 0.00 0.00 0.00 3.24
5814 7523 8.367660 TCATAGTGAAATCTCTACCAAGACTT 57.632 34.615 0.00 0.00 0.00 3.01
5815 7524 9.475620 TCATAGTGAAATCTCTACCAAGACTTA 57.524 33.333 0.00 0.00 0.00 2.24
5827 7536 9.680315 CTCTACCAAGACTTATATTTAGGAACG 57.320 37.037 0.00 0.00 0.00 3.95
5828 7537 8.636213 TCTACCAAGACTTATATTTAGGAACGG 58.364 37.037 0.00 0.00 0.00 4.44
5829 7538 7.427989 ACCAAGACTTATATTTAGGAACGGA 57.572 36.000 0.00 0.00 0.00 4.69
5830 7539 8.030913 ACCAAGACTTATATTTAGGAACGGAT 57.969 34.615 0.00 0.00 0.00 4.18
5831 7540 7.931948 ACCAAGACTTATATTTAGGAACGGATG 59.068 37.037 0.00 0.00 0.00 3.51
5832 7541 7.387948 CCAAGACTTATATTTAGGAACGGATGG 59.612 40.741 0.00 0.00 0.00 3.51
5833 7542 7.850935 AGACTTATATTTAGGAACGGATGGA 57.149 36.000 0.00 0.00 0.00 3.41
5834 7543 7.897864 AGACTTATATTTAGGAACGGATGGAG 58.102 38.462 0.00 0.00 0.00 3.86
5835 7544 7.509659 AGACTTATATTTAGGAACGGATGGAGT 59.490 37.037 0.00 0.00 0.00 3.85
5836 7545 8.716674 ACTTATATTTAGGAACGGATGGAGTA 57.283 34.615 0.00 0.00 0.00 2.59
5837 7546 9.322769 ACTTATATTTAGGAACGGATGGAGTAT 57.677 33.333 0.00 0.00 0.00 2.12
5841 7550 7.613551 ATTTAGGAACGGATGGAGTATAAGT 57.386 36.000 0.00 0.00 0.00 2.24
5842 7551 6.645790 TTAGGAACGGATGGAGTATAAGTC 57.354 41.667 0.00 0.00 0.00 3.01
5843 7552 4.805744 AGGAACGGATGGAGTATAAGTCT 58.194 43.478 0.00 0.00 0.00 3.24
5844 7553 5.209659 AGGAACGGATGGAGTATAAGTCTT 58.790 41.667 0.00 0.00 0.00 3.01
5845 7554 5.661759 AGGAACGGATGGAGTATAAGTCTTT 59.338 40.000 0.00 0.00 0.00 2.52
5846 7555 6.156429 AGGAACGGATGGAGTATAAGTCTTTT 59.844 38.462 0.00 0.00 0.00 2.27
5847 7556 6.822170 GGAACGGATGGAGTATAAGTCTTTTT 59.178 38.462 0.00 0.00 0.00 1.94
5848 7557 7.983484 GGAACGGATGGAGTATAAGTCTTTTTA 59.017 37.037 0.00 0.00 0.00 1.52
5849 7558 8.943909 AACGGATGGAGTATAAGTCTTTTTAG 57.056 34.615 0.00 0.00 0.00 1.85
5850 7559 8.302515 ACGGATGGAGTATAAGTCTTTTTAGA 57.697 34.615 0.00 0.00 0.00 2.10
5851 7560 8.414778 ACGGATGGAGTATAAGTCTTTTTAGAG 58.585 37.037 0.00 0.00 0.00 2.43
5852 7561 8.630917 CGGATGGAGTATAAGTCTTTTTAGAGA 58.369 37.037 0.00 0.00 0.00 3.10
5947 7656 9.905713 TTAGGATGTAGATTCACTAATTTTGCT 57.094 29.630 0.00 0.00 32.49 3.91
5948 7657 8.443953 AGGATGTAGATTCACTAATTTTGCTC 57.556 34.615 0.00 0.00 32.49 4.26
5949 7658 7.500559 AGGATGTAGATTCACTAATTTTGCTCC 59.499 37.037 0.00 0.00 32.49 4.70
5950 7659 6.662414 TGTAGATTCACTAATTTTGCTCCG 57.338 37.500 0.00 0.00 32.49 4.63
5951 7660 6.170506 TGTAGATTCACTAATTTTGCTCCGT 58.829 36.000 0.00 0.00 32.49 4.69
5952 7661 7.324935 TGTAGATTCACTAATTTTGCTCCGTA 58.675 34.615 0.00 0.00 32.49 4.02
5953 7662 7.985184 TGTAGATTCACTAATTTTGCTCCGTAT 59.015 33.333 0.00 0.00 32.49 3.06
5954 7663 7.251704 AGATTCACTAATTTTGCTCCGTATG 57.748 36.000 0.00 0.00 0.00 2.39
5955 7664 6.823689 AGATTCACTAATTTTGCTCCGTATGT 59.176 34.615 0.00 0.00 0.00 2.29
5956 7665 5.794687 TCACTAATTTTGCTCCGTATGTG 57.205 39.130 0.00 0.00 0.00 3.21
5957 7666 4.634004 TCACTAATTTTGCTCCGTATGTGG 59.366 41.667 0.00 0.00 0.00 4.17
5958 7667 4.394920 CACTAATTTTGCTCCGTATGTGGT 59.605 41.667 0.00 0.00 0.00 4.16
5959 7668 4.634443 ACTAATTTTGCTCCGTATGTGGTC 59.366 41.667 0.00 0.00 0.00 4.02
5960 7669 2.851263 TTTTGCTCCGTATGTGGTCT 57.149 45.000 0.00 0.00 0.00 3.85
5961 7670 2.093306 TTTGCTCCGTATGTGGTCTG 57.907 50.000 0.00 0.00 0.00 3.51
5962 7671 0.391130 TTGCTCCGTATGTGGTCTGC 60.391 55.000 0.00 0.00 0.00 4.26
5963 7672 1.218047 GCTCCGTATGTGGTCTGCA 59.782 57.895 0.00 0.00 0.00 4.41
5964 7673 0.179073 GCTCCGTATGTGGTCTGCAT 60.179 55.000 0.00 0.00 0.00 3.96
5965 7674 1.743772 GCTCCGTATGTGGTCTGCATT 60.744 52.381 0.00 0.00 0.00 3.56
5966 7675 1.935873 CTCCGTATGTGGTCTGCATTG 59.064 52.381 0.00 0.00 0.00 2.82
5967 7676 0.378257 CCGTATGTGGTCTGCATTGC 59.622 55.000 0.46 0.46 0.00 3.56
5968 7677 1.085893 CGTATGTGGTCTGCATTGCA 58.914 50.000 11.50 11.50 36.92 4.08
5969 7678 1.468127 CGTATGTGGTCTGCATTGCAA 59.532 47.619 13.18 0.00 38.41 4.08
5970 7679 2.097954 CGTATGTGGTCTGCATTGCAAT 59.902 45.455 13.18 5.99 38.41 3.56
5971 7680 2.953466 ATGTGGTCTGCATTGCAATC 57.047 45.000 9.53 8.29 38.41 2.67
5972 7681 1.913778 TGTGGTCTGCATTGCAATCT 58.086 45.000 9.53 0.00 38.41 2.40
5973 7682 1.814394 TGTGGTCTGCATTGCAATCTC 59.186 47.619 9.53 5.12 38.41 2.75
5974 7683 2.089980 GTGGTCTGCATTGCAATCTCT 58.910 47.619 9.53 0.00 38.41 3.10
5975 7684 3.273434 GTGGTCTGCATTGCAATCTCTA 58.727 45.455 9.53 0.00 38.41 2.43
5976 7685 3.691118 GTGGTCTGCATTGCAATCTCTAA 59.309 43.478 9.53 0.00 38.41 2.10
5977 7686 4.156556 GTGGTCTGCATTGCAATCTCTAAA 59.843 41.667 9.53 0.00 38.41 1.85
5978 7687 4.766373 TGGTCTGCATTGCAATCTCTAAAA 59.234 37.500 9.53 0.00 38.41 1.52
5979 7688 5.243507 TGGTCTGCATTGCAATCTCTAAAAA 59.756 36.000 9.53 0.00 38.41 1.94
5980 7689 5.803967 GGTCTGCATTGCAATCTCTAAAAAG 59.196 40.000 9.53 0.00 38.41 2.27
5981 7690 6.349611 GGTCTGCATTGCAATCTCTAAAAAGA 60.350 38.462 9.53 0.00 38.41 2.52
5982 7691 6.525976 GTCTGCATTGCAATCTCTAAAAAGAC 59.474 38.462 9.53 7.95 38.41 3.01
5983 7692 6.432162 TCTGCATTGCAATCTCTAAAAAGACT 59.568 34.615 9.53 0.00 38.41 3.24
5984 7693 6.985117 TGCATTGCAATCTCTAAAAAGACTT 58.015 32.000 9.53 0.00 34.76 3.01
5985 7694 8.109705 TGCATTGCAATCTCTAAAAAGACTTA 57.890 30.769 9.53 0.00 34.76 2.24
5986 7695 8.742777 TGCATTGCAATCTCTAAAAAGACTTAT 58.257 29.630 9.53 0.00 34.76 1.73
6002 7711 8.485578 AAAGACTTATATCTAGGAACAGAGGG 57.514 38.462 0.00 0.00 0.00 4.30
6003 7712 7.169287 AGACTTATATCTAGGAACAGAGGGT 57.831 40.000 0.00 0.00 0.00 4.34
6004 7713 7.007723 AGACTTATATCTAGGAACAGAGGGTG 58.992 42.308 0.00 0.00 0.00 4.61
6005 7714 6.684538 ACTTATATCTAGGAACAGAGGGTGT 58.315 40.000 0.00 0.00 43.24 4.16
6006 7715 7.823635 ACTTATATCTAGGAACAGAGGGTGTA 58.176 38.462 0.00 0.00 39.03 2.90
6007 7716 8.457757 ACTTATATCTAGGAACAGAGGGTGTAT 58.542 37.037 0.00 0.00 39.03 2.29
6008 7717 9.315363 CTTATATCTAGGAACAGAGGGTGTATT 57.685 37.037 0.00 0.00 39.03 1.89
6009 7718 9.670442 TTATATCTAGGAACAGAGGGTGTATTT 57.330 33.333 0.00 0.00 39.03 1.40
6010 7719 6.893020 ATCTAGGAACAGAGGGTGTATTTT 57.107 37.500 0.00 0.00 39.03 1.82
6011 7720 6.295719 TCTAGGAACAGAGGGTGTATTTTC 57.704 41.667 0.00 0.00 39.03 2.29
6012 7721 6.023603 TCTAGGAACAGAGGGTGTATTTTCT 58.976 40.000 0.00 0.00 39.03 2.52
6013 7722 5.584551 AGGAACAGAGGGTGTATTTTCTT 57.415 39.130 0.00 0.00 39.03 2.52
6014 7723 5.953571 AGGAACAGAGGGTGTATTTTCTTT 58.046 37.500 0.00 0.00 39.03 2.52
6015 7724 6.373759 AGGAACAGAGGGTGTATTTTCTTTT 58.626 36.000 0.00 0.00 39.03 2.27
6016 7725 6.839134 AGGAACAGAGGGTGTATTTTCTTTTT 59.161 34.615 0.00 0.00 39.03 1.94
6017 7726 8.002459 AGGAACAGAGGGTGTATTTTCTTTTTA 58.998 33.333 0.00 0.00 39.03 1.52
6018 7727 8.635328 GGAACAGAGGGTGTATTTTCTTTTTAA 58.365 33.333 0.00 0.00 39.03 1.52
6021 7730 9.588096 ACAGAGGGTGTATTTTCTTTTTAATCT 57.412 29.630 0.00 0.00 37.75 2.40
6039 7748 9.801873 TTTTAATCTTTTTGACAGAAGGAACAG 57.198 29.630 0.00 0.00 0.00 3.16
6040 7749 8.746052 TTAATCTTTTTGACAGAAGGAACAGA 57.254 30.769 0.00 0.00 0.00 3.41
6041 7750 6.874288 ATCTTTTTGACAGAAGGAACAGAG 57.126 37.500 0.00 0.00 0.00 3.35
6042 7751 5.126067 TCTTTTTGACAGAAGGAACAGAGG 58.874 41.667 0.00 0.00 0.00 3.69
6043 7752 3.492102 TTTGACAGAAGGAACAGAGGG 57.508 47.619 0.00 0.00 0.00 4.30
6044 7753 2.398754 TGACAGAAGGAACAGAGGGA 57.601 50.000 0.00 0.00 0.00 4.20
6045 7754 2.251818 TGACAGAAGGAACAGAGGGAG 58.748 52.381 0.00 0.00 0.00 4.30
6050 7759 4.040584 ACAGAAGGAACAGAGGGAGTAAAC 59.959 45.833 0.00 0.00 0.00 2.01
6054 7763 6.557633 AGAAGGAACAGAGGGAGTAAACTTAA 59.442 38.462 0.00 0.00 0.00 1.85
6066 7775 4.860022 AGTAAACTTAATGATGCTGGCCT 58.140 39.130 3.32 0.00 0.00 5.19
6113 7822 0.811616 AAGATTTAGCGGGCGCAGAG 60.812 55.000 10.83 0.00 44.88 3.35
6116 7825 0.811616 ATTTAGCGGGCGCAGAGAAG 60.812 55.000 10.83 0.00 44.88 2.85
6118 7827 1.884075 TTAGCGGGCGCAGAGAAGAA 61.884 55.000 10.83 0.00 44.88 2.52
6119 7828 1.884075 TAGCGGGCGCAGAGAAGAAA 61.884 55.000 10.83 0.00 44.88 2.52
6120 7829 2.109126 GCGGGCGCAGAGAAGAAAT 61.109 57.895 10.83 0.00 41.49 2.17
6121 7830 1.717937 CGGGCGCAGAGAAGAAATG 59.282 57.895 10.83 0.00 0.00 2.32
6124 7833 2.803133 CGGGCGCAGAGAAGAAATGATA 60.803 50.000 10.83 0.00 0.00 2.15
6125 7834 2.545946 GGGCGCAGAGAAGAAATGATAC 59.454 50.000 10.83 0.00 0.00 2.24
6137 7860 7.108847 AGAAGAAATGATACTCAACCTGGAAG 58.891 38.462 0.00 0.00 0.00 3.46
6216 7939 3.616956 TGTTCTCTGTATCTTGCAGGG 57.383 47.619 0.00 0.00 35.85 4.45
6225 7960 1.202330 ATCTTGCAGGGACAGGAGAG 58.798 55.000 0.00 0.00 0.00 3.20
6255 7990 5.543667 AGGTTGACCTTTGCTAGTCAGCTA 61.544 45.833 0.00 0.00 46.09 3.32
6309 8044 9.389755 TGAATTCTTCATGATTACGGTATGAAA 57.610 29.630 7.05 0.00 39.51 2.69
6315 8050 7.566760 TCATGATTACGGTATGAAAGCAAAT 57.433 32.000 0.00 0.00 0.00 2.32
6317 8052 5.577835 TGATTACGGTATGAAAGCAAATGC 58.422 37.500 0.00 0.00 42.49 3.56
6340 8075 7.380536 TGCTTTGACAAATTGAAATAGCTGAT 58.619 30.769 0.00 0.00 0.00 2.90
6346 8081 6.732154 ACAAATTGAAATAGCTGATGATCGG 58.268 36.000 0.00 0.00 0.00 4.18
6368 8103 2.670905 TCATTCGTTGACAATAGCACGG 59.329 45.455 0.00 0.00 0.00 4.94
6389 8126 3.243907 GGTTAGTCAATCCAGCTCGCTAT 60.244 47.826 0.00 0.00 0.00 2.97
6390 8127 4.372656 GTTAGTCAATCCAGCTCGCTATT 58.627 43.478 0.00 0.00 0.00 1.73
6391 8128 3.104843 AGTCAATCCAGCTCGCTATTC 57.895 47.619 0.00 0.00 0.00 1.75
6392 8129 2.697751 AGTCAATCCAGCTCGCTATTCT 59.302 45.455 0.00 0.00 0.00 2.40
6393 8130 2.799412 GTCAATCCAGCTCGCTATTCTG 59.201 50.000 0.00 0.00 0.00 3.02
6394 8131 2.432146 TCAATCCAGCTCGCTATTCTGT 59.568 45.455 0.00 0.00 0.00 3.41
6395 8132 3.636764 TCAATCCAGCTCGCTATTCTGTA 59.363 43.478 0.00 0.00 0.00 2.74
6396 8133 4.281941 TCAATCCAGCTCGCTATTCTGTAT 59.718 41.667 0.00 0.00 0.00 2.29
6397 8134 4.881019 ATCCAGCTCGCTATTCTGTATT 57.119 40.909 0.00 0.00 0.00 1.89
6398 8135 4.672587 TCCAGCTCGCTATTCTGTATTT 57.327 40.909 0.00 0.00 0.00 1.40
6399 8136 5.784578 TCCAGCTCGCTATTCTGTATTTA 57.215 39.130 0.00 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.522830 CAAAGGTGTGTTAATATGGAATGACTT 58.477 33.333 0.00 0.00 0.00 3.01
28 29 6.404184 CGCAAAGGTGTGTTAATATGGAATGA 60.404 38.462 0.00 0.00 0.00 2.57
39 40 2.224090 TGCTCTACGCAAAGGTGTGTTA 60.224 45.455 0.00 0.00 46.38 2.41
140 141 8.212995 TCTATGATTTGTATGGAGAATGAAGCA 58.787 33.333 0.00 0.00 0.00 3.91
149 150 6.057533 TGCAGGTTCTATGATTTGTATGGAG 58.942 40.000 0.00 0.00 0.00 3.86
151 152 6.889301 ATGCAGGTTCTATGATTTGTATGG 57.111 37.500 0.00 0.00 0.00 2.74
166 167 2.110011 AGTTAGGTCCCAAATGCAGGTT 59.890 45.455 0.00 0.00 0.00 3.50
173 188 3.270812 TGGGGTTAGTTAGGTCCCAAAT 58.729 45.455 0.00 0.00 43.91 2.32
175 190 2.436964 TGGGGTTAGTTAGGTCCCAA 57.563 50.000 0.00 0.00 43.91 4.12
218 233 6.449635 TGCTCAGTAGTCATGTTTTGTTTT 57.550 33.333 0.00 0.00 0.00 2.43
219 234 6.262944 TGATGCTCAGTAGTCATGTTTTGTTT 59.737 34.615 0.00 0.00 0.00 2.83
220 235 5.764686 TGATGCTCAGTAGTCATGTTTTGTT 59.235 36.000 0.00 0.00 0.00 2.83
221 236 5.308014 TGATGCTCAGTAGTCATGTTTTGT 58.692 37.500 0.00 0.00 0.00 2.83
222 237 5.868043 TGATGCTCAGTAGTCATGTTTTG 57.132 39.130 0.00 0.00 0.00 2.44
226 241 6.041296 TGTGATATGATGCTCAGTAGTCATGT 59.959 38.462 0.00 0.00 33.65 3.21
288 311 6.939730 TGTGAAATAGAGCTGGAAATGTACAA 59.060 34.615 0.00 0.00 0.00 2.41
505 528 4.547367 CCATCCCGCCGGTCCTTC 62.547 72.222 1.90 0.00 0.00 3.46
520 543 0.753848 TGTAGATCCGGATCGTGCCA 60.754 55.000 33.24 24.92 42.48 4.92
567 590 1.522092 CTCCACAGCCGCCTTATCA 59.478 57.895 0.00 0.00 0.00 2.15
643 666 0.616111 ACTTCCTCCACCTCATCGCT 60.616 55.000 0.00 0.00 0.00 4.93
790 813 0.396811 AACTGTTTCCTCCGGGTCAG 59.603 55.000 0.00 4.41 35.25 3.51
792 815 1.670967 CGTAACTGTTTCCTCCGGGTC 60.671 57.143 0.00 0.00 0.00 4.46
793 816 0.319405 CGTAACTGTTTCCTCCGGGT 59.681 55.000 0.00 0.00 0.00 5.28
794 817 1.017701 GCGTAACTGTTTCCTCCGGG 61.018 60.000 0.00 0.00 0.00 5.73
796 819 0.037605 AGGCGTAACTGTTTCCTCCG 60.038 55.000 0.00 0.00 0.00 4.63
797 820 2.074576 GAAGGCGTAACTGTTTCCTCC 58.925 52.381 0.00 0.00 0.00 4.30
798 821 1.725164 CGAAGGCGTAACTGTTTCCTC 59.275 52.381 0.00 0.00 0.00 3.71
799 822 1.792006 CGAAGGCGTAACTGTTTCCT 58.208 50.000 0.00 0.72 0.00 3.36
940 965 0.109873 ACGAACACGATCGACTGTCC 60.110 55.000 24.34 3.24 45.48 4.02
1473 1839 2.575993 CCAGTGGAGAGCACCGAG 59.424 66.667 1.68 0.00 0.00 4.63
1608 1977 8.642432 ACACATAAGCATAGTAGACATACACAT 58.358 33.333 0.00 0.00 34.07 3.21
1631 2000 8.403236 ACTTACCAATCACTTAAAGAACAACAC 58.597 33.333 0.00 0.00 0.00 3.32
1632 2001 8.402472 CACTTACCAATCACTTAAAGAACAACA 58.598 33.333 0.00 0.00 0.00 3.33
1639 2039 7.962964 TCAGTCACTTACCAATCACTTAAAG 57.037 36.000 0.00 0.00 0.00 1.85
1669 2069 7.103641 TGATCCCTAATTCTTTGTACACTGAC 58.896 38.462 0.00 0.00 0.00 3.51
1690 2090 7.128331 GCAACACATACAAGACATACATGATC 58.872 38.462 0.00 0.00 0.00 2.92
1712 2112 4.384098 CCCATACAACTCCTACAGATGCAA 60.384 45.833 0.00 0.00 0.00 4.08
1717 2117 4.878968 TCATCCCATACAACTCCTACAGA 58.121 43.478 0.00 0.00 0.00 3.41
1761 2161 4.082787 ACAGTATTTCAAAACTGCATCGGG 60.083 41.667 10.57 0.00 45.65 5.14
1834 2235 6.234177 AGCAGTCTATTGTTTTCAGCTAAGT 58.766 36.000 0.00 0.00 0.00 2.24
1938 2339 1.707427 ACAATTGGACTTCTGGCCTCT 59.293 47.619 10.83 0.00 0.00 3.69
2084 2488 3.319137 TGTACACTGATCCACTTCAGC 57.681 47.619 0.00 0.00 45.75 4.26
2200 2605 2.534349 CGCAACTGTATCACGGTATGTC 59.466 50.000 0.00 0.00 36.53 3.06
2214 2619 7.218204 GCTAATCTTGGTATAAAAACGCAACTG 59.782 37.037 0.00 0.00 0.00 3.16
2216 2621 7.248437 AGCTAATCTTGGTATAAAAACGCAAC 58.752 34.615 0.00 0.00 0.00 4.17
2347 2752 1.066908 CCTCAGCTCTCCATCGTTCTC 59.933 57.143 0.00 0.00 0.00 2.87
2473 2880 1.129326 GTGTTCACGAGTTCGGTGAG 58.871 55.000 6.48 0.00 44.95 3.51
2548 2955 1.436600 CACTCAGCATATCGATGGCC 58.563 55.000 17.12 0.00 33.26 5.36
2631 3038 4.855340 AGTTCCCGGACAATAAACATCAT 58.145 39.130 0.73 0.00 0.00 2.45
2635 3042 5.806818 TGAATAGTTCCCGGACAATAAACA 58.193 37.500 0.73 0.00 0.00 2.83
2646 3053 5.567138 AGCTTGAAAATGAATAGTTCCCG 57.433 39.130 0.00 0.00 0.00 5.14
2648 3055 8.021396 ACGTAAAGCTTGAAAATGAATAGTTCC 58.979 33.333 0.00 0.00 0.00 3.62
2651 3058 8.448615 GGTACGTAAAGCTTGAAAATGAATAGT 58.551 33.333 0.00 0.00 0.00 2.12
2746 3153 4.829492 GGAAATGCAGTCCATAGCCTAATT 59.171 41.667 13.17 0.00 35.05 1.40
2832 3245 1.138661 ACCAACAAATGTGCAAGGGTG 59.861 47.619 0.00 0.00 0.00 4.61
2870 3283 3.362401 CGCAGAACAATAAGCATAGCGAG 60.362 47.826 0.00 0.00 44.76 5.03
2955 3368 7.014615 ACAAATGAGAAAGCATAGAAAACCACT 59.985 33.333 0.00 0.00 0.00 4.00
2984 3405 5.730296 ATGTAGGTATCTGTATGACAGGC 57.270 43.478 6.77 0.00 45.94 4.85
3055 3476 3.262420 CCTCAGCGCTTAAGTAACACAT 58.738 45.455 7.50 0.00 0.00 3.21
3062 3483 4.285851 GTGCCTCAGCGCTTAAGT 57.714 55.556 7.50 0.00 46.32 2.24
3078 3499 2.452064 CGCCATACCATCCTGGGGT 61.452 63.158 0.00 0.00 43.37 4.95
3103 3524 0.833287 ATGTCTAAGGCAGTGCGGAT 59.167 50.000 9.45 0.00 0.00 4.18
3109 3530 3.326747 GACGTTTCATGTCTAAGGCAGT 58.673 45.455 0.00 0.00 31.58 4.40
3130 3554 1.151668 CCTTTCACTGAAGCAGTCGG 58.848 55.000 0.00 0.00 43.43 4.79
3172 3596 1.153549 GCGAGGAACAGGCAGTAGG 60.154 63.158 0.00 0.00 0.00 3.18
3207 3650 1.075482 CTCCAAGCCCCAGAAGCAA 59.925 57.895 0.00 0.00 0.00 3.91
3257 3700 1.820906 GCGCATGAAGGGATGCTCA 60.821 57.895 0.30 0.00 45.60 4.26
3317 3760 3.683847 CGCAGAATCCCTTCTTCCTCAAT 60.684 47.826 0.00 0.00 39.78 2.57
3334 3777 1.275291 CCTAAAACTCCTCACCGCAGA 59.725 52.381 0.00 0.00 0.00 4.26
3365 3847 3.154710 TGCTCTCTTTCCTCGTTGTAGA 58.845 45.455 0.00 0.00 0.00 2.59
3419 3901 5.782925 ACCTAATTCCACTATCCTCACTCT 58.217 41.667 0.00 0.00 0.00 3.24
3450 3932 2.173126 AAGCCCATCTAGCAGACTCT 57.827 50.000 0.00 0.00 0.00 3.24
3457 3945 2.119009 GCCCAAAAGCCCATCTAGC 58.881 57.895 0.00 0.00 0.00 3.42
3539 4201 4.015084 AGAGCAATCAAGCAGTTTAGCAT 58.985 39.130 0.00 0.00 36.85 3.79
3594 4256 1.340405 ACCTCCTAACGTAAGGCGAGA 60.340 52.381 0.00 0.00 44.77 4.04
3605 4267 5.009610 TGTTTTCATTGCTCAACCTCCTAAC 59.990 40.000 0.00 0.00 0.00 2.34
3625 4287 7.461182 TTTATTGCTACATTACCAGCTGTTT 57.539 32.000 13.81 1.21 38.63 2.83
3671 4335 7.871973 ACTACATCAAATGTCTAGATGCAGATC 59.128 37.037 8.42 0.00 43.67 2.75
3672 4336 7.733969 ACTACATCAAATGTCTAGATGCAGAT 58.266 34.615 8.42 0.00 43.67 2.90
3689 4354 9.736414 GGTTAGGTCTGACTATATACTACATCA 57.264 37.037 7.85 0.00 0.00 3.07
3712 4385 2.395619 CGTAGGTCTTATCCAGGGGTT 58.604 52.381 0.00 0.00 0.00 4.11
3713 4386 2.033208 GCGTAGGTCTTATCCAGGGGT 61.033 57.143 0.00 0.00 0.00 4.95
3714 4387 0.680061 GCGTAGGTCTTATCCAGGGG 59.320 60.000 0.00 0.00 0.00 4.79
3715 4388 1.705873 AGCGTAGGTCTTATCCAGGG 58.294 55.000 0.00 0.00 0.00 4.45
3716 4389 4.281182 ACAATAGCGTAGGTCTTATCCAGG 59.719 45.833 0.00 0.00 40.68 4.45
3717 4390 5.455056 ACAATAGCGTAGGTCTTATCCAG 57.545 43.478 0.00 0.00 40.68 3.86
3718 4391 5.597806 CAACAATAGCGTAGGTCTTATCCA 58.402 41.667 0.00 0.00 40.68 3.41
3719 4392 4.448060 GCAACAATAGCGTAGGTCTTATCC 59.552 45.833 0.00 0.00 40.68 2.59
3720 4393 5.047847 TGCAACAATAGCGTAGGTCTTATC 58.952 41.667 0.00 0.00 40.68 1.75
3722 4395 4.178540 GTGCAACAATAGCGTAGGTCTTA 58.821 43.478 0.00 0.00 36.46 2.10
3723 4396 3.000727 GTGCAACAATAGCGTAGGTCTT 58.999 45.455 0.00 0.00 36.46 3.01
3724 4397 2.618053 GTGCAACAATAGCGTAGGTCT 58.382 47.619 0.00 0.00 36.46 3.85
3737 5404 1.605457 GAGACGTCTCCATGTGCAACA 60.605 52.381 31.24 0.00 44.07 3.33
3744 5411 3.303881 TGTTCAAGAGACGTCTCCATG 57.696 47.619 35.83 32.28 43.88 3.66
3799 5466 5.584251 GGAAGCTAAAAAGATGAGAGGAGTG 59.416 44.000 0.00 0.00 0.00 3.51
3802 5469 4.466370 TCGGAAGCTAAAAAGATGAGAGGA 59.534 41.667 0.00 0.00 0.00 3.71
3816 5483 7.468141 AATGATGTCTGTATATCGGAAGCTA 57.532 36.000 0.00 0.00 32.76 3.32
3870 5537 6.915544 TCTGCTTCAAATGACATAGCTTAG 57.084 37.500 8.90 0.85 33.15 2.18
3985 5652 3.520569 GCAGAAAACTGGCAGAAACAAA 58.479 40.909 23.66 0.00 0.00 2.83
4211 5883 4.811024 CACCCTCGCGCAATGATATTATAT 59.189 41.667 8.75 0.00 0.00 0.86
4214 5886 2.224185 ACACCCTCGCGCAATGATATTA 60.224 45.455 8.75 0.00 0.00 0.98
4215 5887 1.229428 CACCCTCGCGCAATGATATT 58.771 50.000 8.75 0.00 0.00 1.28
4256 5930 1.334160 TTGCAGACAGAGTACCGGAA 58.666 50.000 9.46 0.00 0.00 4.30
4303 5977 7.601856 TGTGTCTGTGTCTTCAATTTTTCTTT 58.398 30.769 0.00 0.00 0.00 2.52
4420 6094 9.461312 TCACAGCTGGATTTGTATTTAGTATTT 57.539 29.630 19.93 0.00 0.00 1.40
4421 6095 9.113838 CTCACAGCTGGATTTGTATTTAGTATT 57.886 33.333 19.93 0.00 0.00 1.89
4422 6096 8.267894 ACTCACAGCTGGATTTGTATTTAGTAT 58.732 33.333 19.93 0.00 0.00 2.12
4423 6097 7.620880 ACTCACAGCTGGATTTGTATTTAGTA 58.379 34.615 19.93 0.00 0.00 1.82
4424 6098 6.476378 ACTCACAGCTGGATTTGTATTTAGT 58.524 36.000 19.93 3.35 0.00 2.24
4425 6099 6.992063 ACTCACAGCTGGATTTGTATTTAG 57.008 37.500 19.93 2.74 0.00 1.85
4426 6100 7.620880 ACTACTCACAGCTGGATTTGTATTTA 58.379 34.615 19.93 0.00 0.00 1.40
4427 6101 6.476378 ACTACTCACAGCTGGATTTGTATTT 58.524 36.000 19.93 1.93 0.00 1.40
4428 6102 6.054860 ACTACTCACAGCTGGATTTGTATT 57.945 37.500 19.93 5.37 0.00 1.89
4429 6103 5.683876 ACTACTCACAGCTGGATTTGTAT 57.316 39.130 19.93 2.79 0.00 2.29
4453 6127 4.291540 TCACAGCACAACTTGAATGAAC 57.708 40.909 0.00 0.00 0.00 3.18
4467 6141 0.033228 CGGGCCAAAAATTCACAGCA 59.967 50.000 4.39 0.00 0.00 4.41
4533 6207 5.406767 TTTCAAATGCAAACTCAATGTGC 57.593 34.783 0.00 0.00 38.78 4.57
4534 6208 8.738554 CAAAATTTCAAATGCAAACTCAATGTG 58.261 29.630 0.00 0.00 0.00 3.21
4535 6209 8.460428 ACAAAATTTCAAATGCAAACTCAATGT 58.540 25.926 0.00 0.00 0.00 2.71
4536 6210 8.738554 CACAAAATTTCAAATGCAAACTCAATG 58.261 29.630 0.00 0.00 0.00 2.82
4609 6285 8.607459 CATCCATGTGTTTCAGACTATCTAAAC 58.393 37.037 0.00 0.00 33.46 2.01
4633 6309 7.987458 ACTGTGATTTTGATACTTCCGATACAT 59.013 33.333 0.00 0.00 0.00 2.29
4642 6318 4.332819 GCCGCTACTGTGATTTTGATACTT 59.667 41.667 0.00 0.00 0.00 2.24
4645 6321 4.137116 AGCCGCTACTGTGATTTTGATA 57.863 40.909 0.00 0.00 0.00 2.15
4743 6419 6.970043 CACGGTTTGTTTCAGTCTTCATTTTA 59.030 34.615 0.00 0.00 0.00 1.52
4797 6474 6.068670 TGCTGATATAGTAGAGTAGGTGCAA 58.931 40.000 0.00 0.00 0.00 4.08
4835 6512 7.040201 GCAATATAGACCATTGTGTCCATCATT 60.040 37.037 0.00 0.00 36.08 2.57
4907 6584 8.482852 AATAATTGATGGTAGGCAAAGCTTAT 57.517 30.769 0.00 0.00 0.00 1.73
4948 6625 9.565213 GTACGTGTTTCAACTAGAGTACATTAT 57.435 33.333 0.00 0.00 34.91 1.28
5011 6689 3.503839 AACCAACAAGGGGGCGGA 61.504 61.111 0.00 0.00 43.89 5.54
5015 6693 1.836604 CCCACAACCAACAAGGGGG 60.837 63.158 0.00 0.00 43.89 5.40
5065 6747 4.406648 TCATGACGGCTCTGAAACATAT 57.593 40.909 0.00 0.00 0.00 1.78
5108 6790 2.224621 ACTGTTTAGCTGCTGACCATGT 60.225 45.455 13.43 7.32 0.00 3.21
5111 6793 1.140852 ACACTGTTTAGCTGCTGACCA 59.859 47.619 13.43 1.34 0.00 4.02
5114 6796 3.475566 AGAACACTGTTTAGCTGCTGA 57.524 42.857 13.43 0.00 0.00 4.26
5173 6855 3.979948 TCGGTGTTTTCGTTCAGATACA 58.020 40.909 0.00 0.00 0.00 2.29
5259 6941 0.108945 GCTAACGCGTTCCTGGTAGT 60.109 55.000 30.28 3.16 0.00 2.73
5295 6977 1.007964 CGTTGCCGTTTTGCATGGA 60.008 52.632 0.00 0.00 41.70 3.41
5406 7114 1.378531 TGCCTTGATACATCGCCAAC 58.621 50.000 0.00 0.00 0.00 3.77
5408 7116 2.121291 TTTGCCTTGATACATCGCCA 57.879 45.000 0.00 0.00 0.00 5.69
5410 7118 2.095213 TCGTTTTGCCTTGATACATCGC 59.905 45.455 0.00 0.00 0.00 4.58
5411 7119 3.242413 CCTCGTTTTGCCTTGATACATCG 60.242 47.826 0.00 0.00 0.00 3.84
5413 7121 3.950397 TCCTCGTTTTGCCTTGATACAT 58.050 40.909 0.00 0.00 0.00 2.29
5449 7157 4.654091 AAACATATGTTATGGCAGTGCC 57.346 40.909 28.01 28.01 42.82 5.01
5450 7158 5.894807 AGAAAACATATGTTATGGCAGTGC 58.105 37.500 21.07 6.55 37.25 4.40
5451 7159 7.315142 ACAAGAAAACATATGTTATGGCAGTG 58.685 34.615 21.07 14.20 37.25 3.66
5452 7160 7.466746 ACAAGAAAACATATGTTATGGCAGT 57.533 32.000 21.07 12.60 37.25 4.40
5453 7161 7.814107 ACAACAAGAAAACATATGTTATGGCAG 59.186 33.333 21.07 12.04 37.25 4.85
5502 7210 2.520069 TGGGGCGAAACACATTGTAAT 58.480 42.857 0.00 0.00 0.00 1.89
5508 7216 0.039618 ATCCTTGGGGCGAAACACAT 59.960 50.000 0.00 0.00 0.00 3.21
5525 7233 7.201444 CGACATGTAACTCCACAACTTCTAATC 60.201 40.741 0.00 0.00 30.84 1.75
5549 7257 1.580059 ACTTCTAATCCTTGGGGCGA 58.420 50.000 0.00 0.00 0.00 5.54
5550 7258 3.557264 GGATACTTCTAATCCTTGGGGCG 60.557 52.174 0.00 0.00 39.93 6.13
5551 7259 3.244946 GGGATACTTCTAATCCTTGGGGC 60.245 52.174 2.38 0.00 42.27 5.80
5552 7260 4.042187 CAGGGATACTTCTAATCCTTGGGG 59.958 50.000 6.38 0.00 43.42 4.96
5553 7261 5.234466 CAGGGATACTTCTAATCCTTGGG 57.766 47.826 6.38 0.00 43.42 4.12
5555 7263 5.896073 ACCAGGGATACTTCTAATCCTTG 57.104 43.478 7.13 7.13 45.52 3.61
5556 7264 6.910259 AAACCAGGGATACTTCTAATCCTT 57.090 37.500 2.38 0.00 42.27 3.36
5559 7267 5.299531 GGCAAAACCAGGGATACTTCTAATC 59.700 44.000 0.00 0.00 38.86 1.75
5560 7268 5.201243 GGCAAAACCAGGGATACTTCTAAT 58.799 41.667 0.00 0.00 38.86 1.73
5561 7269 4.569015 GGGCAAAACCAGGGATACTTCTAA 60.569 45.833 0.00 0.00 42.05 2.10
5562 7270 3.053917 GGGCAAAACCAGGGATACTTCTA 60.054 47.826 0.00 0.00 42.05 2.10
5564 7272 2.100197 GGGCAAAACCAGGGATACTTC 58.900 52.381 0.00 0.00 42.05 3.01
5565 7273 1.716503 AGGGCAAAACCAGGGATACTT 59.283 47.619 0.00 0.00 42.05 2.24
5567 7275 1.685180 GGAGGGCAAAACCAGGGATAC 60.685 57.143 0.00 0.00 42.05 2.24
5569 7278 1.388133 GGAGGGCAAAACCAGGGAT 59.612 57.895 0.00 0.00 42.05 3.85
5578 7287 1.286248 GGAGTAGAAGGGAGGGCAAA 58.714 55.000 0.00 0.00 0.00 3.68
5580 7289 1.003051 GGGAGTAGAAGGGAGGGCA 59.997 63.158 0.00 0.00 0.00 5.36
5581 7290 0.761323 GAGGGAGTAGAAGGGAGGGC 60.761 65.000 0.00 0.00 0.00 5.19
5582 7291 0.468400 CGAGGGAGTAGAAGGGAGGG 60.468 65.000 0.00 0.00 0.00 4.30
5592 7301 5.134725 AGTATTTAGGAACCGAGGGAGTA 57.865 43.478 0.00 0.00 0.00 2.59
5593 7302 3.959449 GAGTATTTAGGAACCGAGGGAGT 59.041 47.826 0.00 0.00 0.00 3.85
5594 7303 3.321396 GGAGTATTTAGGAACCGAGGGAG 59.679 52.174 0.00 0.00 0.00 4.30
5595 7304 3.303049 GGAGTATTTAGGAACCGAGGGA 58.697 50.000 0.00 0.00 0.00 4.20
5596 7305 2.367894 GGGAGTATTTAGGAACCGAGGG 59.632 54.545 0.00 0.00 0.00 4.30
5597 7306 3.306613 AGGGAGTATTTAGGAACCGAGG 58.693 50.000 0.00 0.00 0.00 4.63
5598 7307 4.038162 CAGAGGGAGTATTTAGGAACCGAG 59.962 50.000 0.00 0.00 0.00 4.63
5599 7308 3.958798 CAGAGGGAGTATTTAGGAACCGA 59.041 47.826 0.00 0.00 0.00 4.69
5600 7309 3.705072 ACAGAGGGAGTATTTAGGAACCG 59.295 47.826 0.00 0.00 0.00 4.44
5601 7310 6.803366 TTACAGAGGGAGTATTTAGGAACC 57.197 41.667 0.00 0.00 0.00 3.62
5602 7311 7.849160 AGTTTACAGAGGGAGTATTTAGGAAC 58.151 38.462 0.00 0.00 0.00 3.62
5603 7312 9.551339 TTAGTTTACAGAGGGAGTATTTAGGAA 57.449 33.333 0.00 0.00 0.00 3.36
5604 7313 9.725206 ATTAGTTTACAGAGGGAGTATTTAGGA 57.275 33.333 0.00 0.00 0.00 2.94
5612 7321 9.939424 ACTCTTATATTAGTTTACAGAGGGAGT 57.061 33.333 0.00 0.00 32.21 3.85
5614 7323 9.710818 ACACTCTTATATTAGTTTACAGAGGGA 57.289 33.333 2.59 0.00 34.50 4.20
5634 7343 9.672673 ACTACTTTATAATGATGCAAACACTCT 57.327 29.630 5.43 0.00 0.00 3.24
5635 7344 9.708222 CACTACTTTATAATGATGCAAACACTC 57.292 33.333 5.43 0.00 0.00 3.51
5636 7345 9.448438 TCACTACTTTATAATGATGCAAACACT 57.552 29.630 5.43 0.00 0.00 3.55
5668 7377 9.750783 TCCCTCTATAAACTAATATAAGAGCGT 57.249 33.333 0.00 0.00 0.00 5.07
5681 7390 9.287373 CGAAGACTTATACTCCCTCTATAAACT 57.713 37.037 0.00 0.00 0.00 2.66
5682 7391 8.022550 GCGAAGACTTATACTCCCTCTATAAAC 58.977 40.741 0.00 0.00 0.00 2.01
5683 7392 7.722728 TGCGAAGACTTATACTCCCTCTATAAA 59.277 37.037 0.00 0.00 0.00 1.40
5684 7393 7.229308 TGCGAAGACTTATACTCCCTCTATAA 58.771 38.462 0.00 0.00 0.00 0.98
5685 7394 6.776744 TGCGAAGACTTATACTCCCTCTATA 58.223 40.000 0.00 0.00 0.00 1.31
5686 7395 5.632118 TGCGAAGACTTATACTCCCTCTAT 58.368 41.667 0.00 0.00 0.00 1.98
5687 7396 5.045012 TGCGAAGACTTATACTCCCTCTA 57.955 43.478 0.00 0.00 0.00 2.43
5688 7397 3.886505 CTGCGAAGACTTATACTCCCTCT 59.113 47.826 0.00 0.00 0.00 3.69
5689 7398 3.884091 TCTGCGAAGACTTATACTCCCTC 59.116 47.826 0.00 0.00 0.00 4.30
5690 7399 3.886505 CTCTGCGAAGACTTATACTCCCT 59.113 47.826 0.00 0.00 0.00 4.20
5691 7400 3.884091 TCTCTGCGAAGACTTATACTCCC 59.116 47.826 0.00 0.00 0.00 4.30
5692 7401 5.699097 ATCTCTGCGAAGACTTATACTCC 57.301 43.478 0.00 0.00 0.00 3.85
5693 7402 7.166804 GTGAAATCTCTGCGAAGACTTATACTC 59.833 40.741 0.00 0.00 0.00 2.59
5694 7403 6.975772 GTGAAATCTCTGCGAAGACTTATACT 59.024 38.462 0.00 0.00 0.00 2.12
5695 7404 6.975772 AGTGAAATCTCTGCGAAGACTTATAC 59.024 38.462 0.00 0.00 0.00 1.47
5696 7405 7.101652 AGTGAAATCTCTGCGAAGACTTATA 57.898 36.000 0.00 0.00 0.00 0.98
5697 7406 5.971763 AGTGAAATCTCTGCGAAGACTTAT 58.028 37.500 0.00 0.00 0.00 1.73
5698 7407 5.392767 AGTGAAATCTCTGCGAAGACTTA 57.607 39.130 0.00 0.00 0.00 2.24
5699 7408 4.264460 AGTGAAATCTCTGCGAAGACTT 57.736 40.909 0.00 0.00 0.00 3.01
5700 7409 3.951775 AGTGAAATCTCTGCGAAGACT 57.048 42.857 0.00 0.00 0.00 3.24
5701 7410 7.489757 AGTTTATAGTGAAATCTCTGCGAAGAC 59.510 37.037 0.00 0.00 0.00 3.01
5702 7411 7.548097 AGTTTATAGTGAAATCTCTGCGAAGA 58.452 34.615 0.00 0.00 0.00 2.87
5703 7412 7.763172 AGTTTATAGTGAAATCTCTGCGAAG 57.237 36.000 0.00 0.00 0.00 3.79
5704 7413 8.248253 TGTAGTTTATAGTGAAATCTCTGCGAA 58.752 33.333 0.00 0.00 0.00 4.70
5705 7414 7.768240 TGTAGTTTATAGTGAAATCTCTGCGA 58.232 34.615 0.00 0.00 0.00 5.10
5706 7415 7.987268 TGTAGTTTATAGTGAAATCTCTGCG 57.013 36.000 0.00 0.00 0.00 5.18
5721 7430 9.632638 ACTCATTTTGCTCCATATGTAGTTTAT 57.367 29.630 1.24 0.00 0.00 1.40
5722 7431 8.892723 CACTCATTTTGCTCCATATGTAGTTTA 58.107 33.333 1.24 0.00 0.00 2.01
5723 7432 7.611467 TCACTCATTTTGCTCCATATGTAGTTT 59.389 33.333 1.24 0.00 0.00 2.66
5724 7433 7.112122 TCACTCATTTTGCTCCATATGTAGTT 58.888 34.615 1.24 0.00 0.00 2.24
5725 7434 6.653020 TCACTCATTTTGCTCCATATGTAGT 58.347 36.000 1.24 0.00 0.00 2.73
5726 7435 7.558161 TTCACTCATTTTGCTCCATATGTAG 57.442 36.000 1.24 0.00 0.00 2.74
5727 7436 7.994911 AGATTCACTCATTTTGCTCCATATGTA 59.005 33.333 1.24 0.00 0.00 2.29
5728 7437 6.832384 AGATTCACTCATTTTGCTCCATATGT 59.168 34.615 1.24 0.00 0.00 2.29
5729 7438 7.273320 AGATTCACTCATTTTGCTCCATATG 57.727 36.000 0.00 0.00 0.00 1.78
5730 7439 7.994911 TGTAGATTCACTCATTTTGCTCCATAT 59.005 33.333 0.00 0.00 0.00 1.78
5731 7440 7.280876 GTGTAGATTCACTCATTTTGCTCCATA 59.719 37.037 0.00 0.00 35.68 2.74
5732 7441 6.094603 GTGTAGATTCACTCATTTTGCTCCAT 59.905 38.462 0.00 0.00 35.68 3.41
5733 7442 5.412594 GTGTAGATTCACTCATTTTGCTCCA 59.587 40.000 0.00 0.00 35.68 3.86
5734 7443 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
5735 7444 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
5736 7445 8.621532 TTTAGTGTAGATTCACTCATTTTGCT 57.378 30.769 2.59 0.00 45.79 3.91
5737 7446 9.846248 ATTTTAGTGTAGATTCACTCATTTTGC 57.154 29.630 2.59 0.00 45.79 3.68
5739 7448 9.846248 GCATTTTAGTGTAGATTCACTCATTTT 57.154 29.630 2.59 0.00 45.79 1.82
5740 7449 9.013229 TGCATTTTAGTGTAGATTCACTCATTT 57.987 29.630 2.59 0.00 45.79 2.32
5741 7450 8.565896 TGCATTTTAGTGTAGATTCACTCATT 57.434 30.769 2.59 0.00 45.79 2.57
5742 7451 8.743085 ATGCATTTTAGTGTAGATTCACTCAT 57.257 30.769 0.00 0.00 45.79 2.90
5743 7452 8.043113 AGATGCATTTTAGTGTAGATTCACTCA 58.957 33.333 0.00 0.00 45.79 3.41
5744 7453 8.430801 AGATGCATTTTAGTGTAGATTCACTC 57.569 34.615 0.00 0.00 45.79 3.51
5754 7463 9.371136 CGGATGTATATAGATGCATTTTAGTGT 57.629 33.333 11.19 0.00 38.38 3.55
5755 7464 9.371136 ACGGATGTATATAGATGCATTTTAGTG 57.629 33.333 11.19 0.00 38.38 2.74
5756 7465 9.371136 CACGGATGTATATAGATGCATTTTAGT 57.629 33.333 11.19 0.00 38.38 2.24
5757 7466 9.371136 ACACGGATGTATATAGATGCATTTTAG 57.629 33.333 11.19 0.00 38.38 1.85
5758 7467 9.150348 CACACGGATGTATATAGATGCATTTTA 57.850 33.333 11.19 0.00 38.38 1.52
5759 7468 7.661437 ACACACGGATGTATATAGATGCATTTT 59.339 33.333 11.19 0.00 38.38 1.82
5760 7469 7.118245 CACACACGGATGTATATAGATGCATTT 59.882 37.037 11.19 0.00 38.38 2.32
5761 7470 6.591448 CACACACGGATGTATATAGATGCATT 59.409 38.462 11.19 0.00 38.38 3.56
5762 7471 6.101997 CACACACGGATGTATATAGATGCAT 58.898 40.000 11.19 0.00 40.68 3.96
5763 7472 5.469479 CACACACGGATGTATATAGATGCA 58.531 41.667 11.19 0.00 36.72 3.96
5764 7473 4.864806 CCACACACGGATGTATATAGATGC 59.135 45.833 0.00 0.00 36.72 3.91
5765 7474 6.025749 ACCACACACGGATGTATATAGATG 57.974 41.667 0.00 0.00 36.72 2.90
5766 7475 6.266786 TGAACCACACACGGATGTATATAGAT 59.733 38.462 0.00 0.00 36.72 1.98
5767 7476 5.595133 TGAACCACACACGGATGTATATAGA 59.405 40.000 0.00 0.00 36.72 1.98
5768 7477 5.838529 TGAACCACACACGGATGTATATAG 58.161 41.667 0.00 0.00 36.72 1.31
5769 7478 5.855740 TGAACCACACACGGATGTATATA 57.144 39.130 0.00 0.00 36.72 0.86
5770 7479 4.746535 TGAACCACACACGGATGTATAT 57.253 40.909 0.00 0.00 36.72 0.86
5771 7480 4.746535 ATGAACCACACACGGATGTATA 57.253 40.909 0.00 0.00 36.72 1.47
5772 7481 3.627395 ATGAACCACACACGGATGTAT 57.373 42.857 0.00 0.00 36.72 2.29
5773 7482 3.512329 ACTATGAACCACACACGGATGTA 59.488 43.478 0.00 0.00 36.72 2.29
5774 7483 2.301870 ACTATGAACCACACACGGATGT 59.698 45.455 0.00 0.00 40.80 3.06
5775 7484 2.672874 CACTATGAACCACACACGGATG 59.327 50.000 0.00 0.00 0.00 3.51
5776 7485 2.565391 TCACTATGAACCACACACGGAT 59.435 45.455 0.00 0.00 0.00 4.18
5777 7486 1.964933 TCACTATGAACCACACACGGA 59.035 47.619 0.00 0.00 0.00 4.69
5778 7487 2.448926 TCACTATGAACCACACACGG 57.551 50.000 0.00 0.00 0.00 4.94
5779 7488 4.690748 AGATTTCACTATGAACCACACACG 59.309 41.667 0.00 0.00 35.89 4.49
5780 7489 5.934625 AGAGATTTCACTATGAACCACACAC 59.065 40.000 0.00 0.00 35.89 3.82
5781 7490 6.114187 AGAGATTTCACTATGAACCACACA 57.886 37.500 0.00 0.00 35.89 3.72
5782 7491 6.535508 GGTAGAGATTTCACTATGAACCACAC 59.464 42.308 0.00 0.00 35.89 3.82
5783 7492 6.212589 TGGTAGAGATTTCACTATGAACCACA 59.787 38.462 0.00 0.00 35.89 4.17
5784 7493 6.640518 TGGTAGAGATTTCACTATGAACCAC 58.359 40.000 0.00 0.00 35.89 4.16
5785 7494 6.867519 TGGTAGAGATTTCACTATGAACCA 57.132 37.500 0.00 0.00 35.89 3.67
5786 7495 7.492994 GTCTTGGTAGAGATTTCACTATGAACC 59.507 40.741 0.00 0.00 35.89 3.62
5787 7496 8.254508 AGTCTTGGTAGAGATTTCACTATGAAC 58.745 37.037 0.00 0.00 35.89 3.18
5788 7497 8.367660 AGTCTTGGTAGAGATTTCACTATGAA 57.632 34.615 0.00 0.00 34.03 2.57
5789 7498 7.962995 AGTCTTGGTAGAGATTTCACTATGA 57.037 36.000 0.00 0.00 0.00 2.15
5801 7510 9.680315 CGTTCCTAAATATAAGTCTTGGTAGAG 57.320 37.037 0.00 0.00 0.00 2.43
5802 7511 8.636213 CCGTTCCTAAATATAAGTCTTGGTAGA 58.364 37.037 0.00 0.00 0.00 2.59
5803 7512 8.636213 TCCGTTCCTAAATATAAGTCTTGGTAG 58.364 37.037 0.00 0.00 0.00 3.18
5804 7513 8.537728 TCCGTTCCTAAATATAAGTCTTGGTA 57.462 34.615 0.00 0.00 0.00 3.25
5805 7514 7.427989 TCCGTTCCTAAATATAAGTCTTGGT 57.572 36.000 0.00 0.00 0.00 3.67
5806 7515 7.387948 CCATCCGTTCCTAAATATAAGTCTTGG 59.612 40.741 0.00 0.00 0.00 3.61
5807 7516 8.148351 TCCATCCGTTCCTAAATATAAGTCTTG 58.852 37.037 0.00 0.00 0.00 3.02
5808 7517 8.258850 TCCATCCGTTCCTAAATATAAGTCTT 57.741 34.615 0.00 0.00 0.00 3.01
5809 7518 7.509659 ACTCCATCCGTTCCTAAATATAAGTCT 59.490 37.037 0.00 0.00 0.00 3.24
5810 7519 7.668492 ACTCCATCCGTTCCTAAATATAAGTC 58.332 38.462 0.00 0.00 0.00 3.01
5811 7520 7.613551 ACTCCATCCGTTCCTAAATATAAGT 57.386 36.000 0.00 0.00 0.00 2.24
5815 7524 9.322769 ACTTATACTCCATCCGTTCCTAAATAT 57.677 33.333 0.00 0.00 0.00 1.28
5816 7525 8.716674 ACTTATACTCCATCCGTTCCTAAATA 57.283 34.615 0.00 0.00 0.00 1.40
5817 7526 7.509659 AGACTTATACTCCATCCGTTCCTAAAT 59.490 37.037 0.00 0.00 0.00 1.40
5818 7527 6.837568 AGACTTATACTCCATCCGTTCCTAAA 59.162 38.462 0.00 0.00 0.00 1.85
5819 7528 6.371278 AGACTTATACTCCATCCGTTCCTAA 58.629 40.000 0.00 0.00 0.00 2.69
5820 7529 5.950023 AGACTTATACTCCATCCGTTCCTA 58.050 41.667 0.00 0.00 0.00 2.94
5821 7530 4.805744 AGACTTATACTCCATCCGTTCCT 58.194 43.478 0.00 0.00 0.00 3.36
5822 7531 5.532664 AAGACTTATACTCCATCCGTTCC 57.467 43.478 0.00 0.00 0.00 3.62
5823 7532 7.845066 AAAAAGACTTATACTCCATCCGTTC 57.155 36.000 0.00 0.00 0.00 3.95
5824 7533 8.755977 TCTAAAAAGACTTATACTCCATCCGTT 58.244 33.333 0.00 0.00 0.00 4.44
5825 7534 8.302515 TCTAAAAAGACTTATACTCCATCCGT 57.697 34.615 0.00 0.00 0.00 4.69
5826 7535 8.630917 TCTCTAAAAAGACTTATACTCCATCCG 58.369 37.037 0.00 0.00 0.00 4.18
5921 7630 9.905713 AGCAAAATTAGTGAATCTACATCCTAA 57.094 29.630 0.00 0.00 0.00 2.69
5922 7631 9.547753 GAGCAAAATTAGTGAATCTACATCCTA 57.452 33.333 0.00 0.00 0.00 2.94
5923 7632 7.500559 GGAGCAAAATTAGTGAATCTACATCCT 59.499 37.037 0.00 0.00 0.00 3.24
5924 7633 7.519008 CGGAGCAAAATTAGTGAATCTACATCC 60.519 40.741 0.00 0.00 0.00 3.51
5925 7634 7.011482 ACGGAGCAAAATTAGTGAATCTACATC 59.989 37.037 0.00 0.00 0.00 3.06
5926 7635 6.823689 ACGGAGCAAAATTAGTGAATCTACAT 59.176 34.615 0.00 0.00 0.00 2.29
5927 7636 6.170506 ACGGAGCAAAATTAGTGAATCTACA 58.829 36.000 0.00 0.00 0.00 2.74
5928 7637 6.663944 ACGGAGCAAAATTAGTGAATCTAC 57.336 37.500 0.00 0.00 0.00 2.59
5929 7638 7.985184 ACATACGGAGCAAAATTAGTGAATCTA 59.015 33.333 0.00 0.00 0.00 1.98
5930 7639 6.823689 ACATACGGAGCAAAATTAGTGAATCT 59.176 34.615 0.00 0.00 0.00 2.40
5931 7640 6.907212 CACATACGGAGCAAAATTAGTGAATC 59.093 38.462 0.00 0.00 0.00 2.52
5932 7641 6.183360 CCACATACGGAGCAAAATTAGTGAAT 60.183 38.462 0.00 0.00 0.00 2.57
5933 7642 5.123186 CCACATACGGAGCAAAATTAGTGAA 59.877 40.000 0.00 0.00 0.00 3.18
5934 7643 4.634004 CCACATACGGAGCAAAATTAGTGA 59.366 41.667 0.00 0.00 0.00 3.41
5935 7644 4.394920 ACCACATACGGAGCAAAATTAGTG 59.605 41.667 0.00 0.00 0.00 2.74
5936 7645 4.585879 ACCACATACGGAGCAAAATTAGT 58.414 39.130 0.00 0.00 0.00 2.24
5937 7646 4.876107 AGACCACATACGGAGCAAAATTAG 59.124 41.667 0.00 0.00 0.00 1.73
5938 7647 4.634004 CAGACCACATACGGAGCAAAATTA 59.366 41.667 0.00 0.00 0.00 1.40
5939 7648 3.440173 CAGACCACATACGGAGCAAAATT 59.560 43.478 0.00 0.00 0.00 1.82
5940 7649 3.009723 CAGACCACATACGGAGCAAAAT 58.990 45.455 0.00 0.00 0.00 1.82
5941 7650 2.422597 CAGACCACATACGGAGCAAAA 58.577 47.619 0.00 0.00 0.00 2.44
5942 7651 1.943968 GCAGACCACATACGGAGCAAA 60.944 52.381 0.00 0.00 0.00 3.68
5943 7652 0.391130 GCAGACCACATACGGAGCAA 60.391 55.000 0.00 0.00 0.00 3.91
5944 7653 1.218047 GCAGACCACATACGGAGCA 59.782 57.895 0.00 0.00 0.00 4.26
5945 7654 0.179073 ATGCAGACCACATACGGAGC 60.179 55.000 0.00 0.00 0.00 4.70
5946 7655 1.935873 CAATGCAGACCACATACGGAG 59.064 52.381 0.00 0.00 0.00 4.63
5947 7656 2.011548 GCAATGCAGACCACATACGGA 61.012 52.381 0.00 0.00 0.00 4.69
5948 7657 0.378257 GCAATGCAGACCACATACGG 59.622 55.000 0.00 0.00 0.00 4.02
5949 7658 1.085893 TGCAATGCAGACCACATACG 58.914 50.000 2.72 0.00 33.32 3.06
5950 7659 3.379372 AGATTGCAATGCAGACCACATAC 59.621 43.478 18.59 0.00 40.61 2.39
5951 7660 3.623703 AGATTGCAATGCAGACCACATA 58.376 40.909 18.59 0.00 40.61 2.29
5952 7661 2.426024 GAGATTGCAATGCAGACCACAT 59.574 45.455 18.59 0.00 40.61 3.21
5953 7662 1.814394 GAGATTGCAATGCAGACCACA 59.186 47.619 18.59 0.00 40.61 4.17
5954 7663 2.089980 AGAGATTGCAATGCAGACCAC 58.910 47.619 18.59 0.00 40.61 4.16
5955 7664 2.502142 AGAGATTGCAATGCAGACCA 57.498 45.000 18.59 0.00 40.61 4.02
5956 7665 4.970662 TTTAGAGATTGCAATGCAGACC 57.029 40.909 18.59 0.51 40.61 3.85
5957 7666 6.525976 GTCTTTTTAGAGATTGCAATGCAGAC 59.474 38.462 18.59 12.16 40.61 3.51
5958 7667 6.432162 AGTCTTTTTAGAGATTGCAATGCAGA 59.568 34.615 18.59 4.50 40.61 4.26
5959 7668 6.618811 AGTCTTTTTAGAGATTGCAATGCAG 58.381 36.000 18.59 2.24 40.61 4.41
5960 7669 6.579666 AGTCTTTTTAGAGATTGCAATGCA 57.420 33.333 18.59 2.72 36.47 3.96
5976 7685 8.929487 CCCTCTGTTCCTAGATATAAGTCTTTT 58.071 37.037 0.00 0.00 0.00 2.27
5977 7686 8.068733 ACCCTCTGTTCCTAGATATAAGTCTTT 58.931 37.037 0.00 0.00 0.00 2.52
5978 7687 7.507616 CACCCTCTGTTCCTAGATATAAGTCTT 59.492 40.741 0.00 0.00 0.00 3.01
5979 7688 7.007723 CACCCTCTGTTCCTAGATATAAGTCT 58.992 42.308 0.00 0.00 0.00 3.24
5980 7689 6.778559 ACACCCTCTGTTCCTAGATATAAGTC 59.221 42.308 0.00 0.00 0.00 3.01
5981 7690 6.684538 ACACCCTCTGTTCCTAGATATAAGT 58.315 40.000 0.00 0.00 0.00 2.24
5982 7691 8.887264 ATACACCCTCTGTTCCTAGATATAAG 57.113 38.462 0.00 0.00 33.91 1.73
5983 7692 9.670442 AAATACACCCTCTGTTCCTAGATATAA 57.330 33.333 0.00 0.00 33.91 0.98
5984 7693 9.670442 AAAATACACCCTCTGTTCCTAGATATA 57.330 33.333 0.00 0.00 33.91 0.86
5985 7694 8.568617 AAAATACACCCTCTGTTCCTAGATAT 57.431 34.615 0.00 0.00 33.91 1.63
5986 7695 7.844779 AGAAAATACACCCTCTGTTCCTAGATA 59.155 37.037 0.00 0.00 33.91 1.98
5987 7696 6.674419 AGAAAATACACCCTCTGTTCCTAGAT 59.326 38.462 0.00 0.00 33.91 1.98
5988 7697 6.023603 AGAAAATACACCCTCTGTTCCTAGA 58.976 40.000 0.00 0.00 33.91 2.43
5989 7698 6.301169 AGAAAATACACCCTCTGTTCCTAG 57.699 41.667 0.00 0.00 33.91 3.02
5990 7699 6.697641 AAGAAAATACACCCTCTGTTCCTA 57.302 37.500 0.00 0.00 33.91 2.94
5991 7700 5.584551 AAGAAAATACACCCTCTGTTCCT 57.415 39.130 0.00 0.00 33.91 3.36
5992 7701 6.650427 AAAAGAAAATACACCCTCTGTTCC 57.350 37.500 0.00 0.00 33.91 3.62
5995 7704 9.588096 AGATTAAAAAGAAAATACACCCTCTGT 57.412 29.630 0.00 0.00 36.82 3.41
6013 7722 9.801873 CTGTTCCTTCTGTCAAAAAGATTAAAA 57.198 29.630 0.00 0.00 0.00 1.52
6014 7723 9.184523 TCTGTTCCTTCTGTCAAAAAGATTAAA 57.815 29.630 0.00 0.00 0.00 1.52
6015 7724 8.746052 TCTGTTCCTTCTGTCAAAAAGATTAA 57.254 30.769 0.00 0.00 0.00 1.40
6016 7725 7.445402 CCTCTGTTCCTTCTGTCAAAAAGATTA 59.555 37.037 0.00 0.00 0.00 1.75
6017 7726 6.264067 CCTCTGTTCCTTCTGTCAAAAAGATT 59.736 38.462 0.00 0.00 0.00 2.40
6018 7727 5.767168 CCTCTGTTCCTTCTGTCAAAAAGAT 59.233 40.000 0.00 0.00 0.00 2.40
6019 7728 5.126067 CCTCTGTTCCTTCTGTCAAAAAGA 58.874 41.667 0.00 0.00 0.00 2.52
6020 7729 4.276926 CCCTCTGTTCCTTCTGTCAAAAAG 59.723 45.833 0.00 0.00 0.00 2.27
6021 7730 4.080015 TCCCTCTGTTCCTTCTGTCAAAAA 60.080 41.667 0.00 0.00 0.00 1.94
6022 7731 3.458118 TCCCTCTGTTCCTTCTGTCAAAA 59.542 43.478 0.00 0.00 0.00 2.44
6023 7732 3.045634 TCCCTCTGTTCCTTCTGTCAAA 58.954 45.455 0.00 0.00 0.00 2.69
6024 7733 2.634940 CTCCCTCTGTTCCTTCTGTCAA 59.365 50.000 0.00 0.00 0.00 3.18
6025 7734 2.251818 CTCCCTCTGTTCCTTCTGTCA 58.748 52.381 0.00 0.00 0.00 3.58
6026 7735 2.252714 ACTCCCTCTGTTCCTTCTGTC 58.747 52.381 0.00 0.00 0.00 3.51
6027 7736 2.407340 ACTCCCTCTGTTCCTTCTGT 57.593 50.000 0.00 0.00 0.00 3.41
6028 7737 4.284746 AGTTTACTCCCTCTGTTCCTTCTG 59.715 45.833 0.00 0.00 0.00 3.02
6029 7738 4.494591 AGTTTACTCCCTCTGTTCCTTCT 58.505 43.478 0.00 0.00 0.00 2.85
6030 7739 4.893829 AGTTTACTCCCTCTGTTCCTTC 57.106 45.455 0.00 0.00 0.00 3.46
6031 7740 6.758806 TTAAGTTTACTCCCTCTGTTCCTT 57.241 37.500 0.00 0.00 0.00 3.36
6032 7741 6.500751 TCATTAAGTTTACTCCCTCTGTTCCT 59.499 38.462 0.00 0.00 0.00 3.36
6033 7742 6.708285 TCATTAAGTTTACTCCCTCTGTTCC 58.292 40.000 0.00 0.00 0.00 3.62
6034 7743 7.201652 GCATCATTAAGTTTACTCCCTCTGTTC 60.202 40.741 0.00 0.00 0.00 3.18
6035 7744 6.599638 GCATCATTAAGTTTACTCCCTCTGTT 59.400 38.462 0.00 0.00 0.00 3.16
6036 7745 6.069963 AGCATCATTAAGTTTACTCCCTCTGT 60.070 38.462 0.00 0.00 0.00 3.41
6037 7746 6.259608 CAGCATCATTAAGTTTACTCCCTCTG 59.740 42.308 0.00 0.00 0.00 3.35
6038 7747 6.352516 CAGCATCATTAAGTTTACTCCCTCT 58.647 40.000 0.00 0.00 0.00 3.69
6039 7748 5.529060 CCAGCATCATTAAGTTTACTCCCTC 59.471 44.000 0.00 0.00 0.00 4.30
6040 7749 5.440610 CCAGCATCATTAAGTTTACTCCCT 58.559 41.667 0.00 0.00 0.00 4.20
6041 7750 4.036852 GCCAGCATCATTAAGTTTACTCCC 59.963 45.833 0.00 0.00 0.00 4.30
6042 7751 4.036852 GGCCAGCATCATTAAGTTTACTCC 59.963 45.833 0.00 0.00 0.00 3.85
6043 7752 4.884164 AGGCCAGCATCATTAAGTTTACTC 59.116 41.667 5.01 0.00 0.00 2.59
6044 7753 4.641989 CAGGCCAGCATCATTAAGTTTACT 59.358 41.667 5.01 0.00 0.00 2.24
6045 7754 4.734695 GCAGGCCAGCATCATTAAGTTTAC 60.735 45.833 16.36 0.00 0.00 2.01
6050 7759 0.672342 GGCAGGCCAGCATCATTAAG 59.328 55.000 22.80 0.00 35.83 1.85
6054 7763 0.481567 ATTAGGCAGGCCAGCATCAT 59.518 50.000 22.80 9.20 38.92 2.45
6066 7775 1.803334 GACGTGTCCAACATTAGGCA 58.197 50.000 0.00 0.00 0.00 4.75
6086 7795 3.001330 CGCCCGCTAAATCTTTCAGTAAG 59.999 47.826 0.00 0.00 35.04 2.34
6116 7825 5.065731 CTGCTTCCAGGTTGAGTATCATTTC 59.934 44.000 0.00 0.00 39.28 2.17
6118 7827 4.521146 CTGCTTCCAGGTTGAGTATCATT 58.479 43.478 0.00 0.00 39.28 2.57
6119 7828 4.148128 CTGCTTCCAGGTTGAGTATCAT 57.852 45.455 0.00 0.00 39.28 2.45
6120 7829 3.616956 CTGCTTCCAGGTTGAGTATCA 57.383 47.619 0.00 0.00 38.32 2.15
6137 7860 2.750888 GGAACCGTTCGCATCCTGC 61.751 63.158 5.19 0.00 40.69 4.85
6216 7939 3.325135 TCAACCTCCTTTTCTCTCCTGTC 59.675 47.826 0.00 0.00 0.00 3.51
6255 7990 0.243095 GCTGAAAGTCTACCCGTCGT 59.757 55.000 0.00 0.00 35.30 4.34
6257 7992 1.000506 TGTGCTGAAAGTCTACCCGTC 59.999 52.381 0.00 0.00 35.30 4.79
6315 8050 6.747125 TCAGCTATTTCAATTTGTCAAAGCA 58.253 32.000 4.03 0.00 0.00 3.91
6317 8052 8.975410 TCATCAGCTATTTCAATTTGTCAAAG 57.025 30.769 4.03 0.00 0.00 2.77
6328 8063 4.670896 TGACCGATCATCAGCTATTTCA 57.329 40.909 0.00 0.00 0.00 2.69
6360 8095 3.741388 GCTGGATTGACTAACCGTGCTAT 60.741 47.826 0.00 0.00 0.00 2.97
6361 8096 2.418197 GCTGGATTGACTAACCGTGCTA 60.418 50.000 0.00 0.00 0.00 3.49
6362 8097 1.676014 GCTGGATTGACTAACCGTGCT 60.676 52.381 0.00 0.00 0.00 4.40
6363 8098 0.727398 GCTGGATTGACTAACCGTGC 59.273 55.000 0.00 0.00 0.00 5.34
6364 8099 2.271800 GAGCTGGATTGACTAACCGTG 58.728 52.381 0.00 0.00 0.00 4.94
6365 8100 1.135083 CGAGCTGGATTGACTAACCGT 60.135 52.381 0.00 0.00 0.00 4.83
6366 8101 1.560923 CGAGCTGGATTGACTAACCG 58.439 55.000 0.00 0.00 0.00 4.44
6368 8103 2.301577 AGCGAGCTGGATTGACTAAC 57.698 50.000 0.00 0.00 0.00 2.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.