Multiple sequence alignment - TraesCS3B01G156400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G156400 chr3B 100.000 2303 0 0 1 2303 149164326 149162024 0.000000e+00 4253.0
1 TraesCS3B01G156400 chr3B 90.385 468 39 6 1840 2303 707451849 707452314 5.440000e-171 610.0
2 TraesCS3B01G156400 chr3B 100.000 32 0 0 26 57 149164233 149164202 2.470000e-05 60.2
3 TraesCS3B01G156400 chr3B 100.000 32 0 0 94 125 149164301 149164270 2.470000e-05 60.2
4 TraesCS3B01G156400 chr3D 88.578 1786 74 46 146 1838 98590690 98588942 0.000000e+00 2049.0
5 TraesCS3B01G156400 chr3A 86.287 773 40 33 146 888 116149246 116148510 0.000000e+00 780.0
6 TraesCS3B01G156400 chr3A 87.687 601 44 12 894 1487 116148474 116147897 0.000000e+00 673.0
7 TraesCS3B01G156400 chr3A 91.195 318 12 5 1533 1838 116147798 116147485 3.540000e-113 418.0
8 TraesCS3B01G156400 chr6B 93.939 462 27 1 1843 2303 716271870 716272331 0.000000e+00 697.0
9 TraesCS3B01G156400 chr6B 91.145 463 38 3 1843 2303 17865822 17865361 1.940000e-175 625.0
10 TraesCS3B01G156400 chr1B 92.873 463 31 2 1843 2303 327235715 327235253 0.000000e+00 671.0
11 TraesCS3B01G156400 chr7B 92.441 463 31 4 1843 2303 27474838 27474378 0.000000e+00 658.0
12 TraesCS3B01G156400 chr7B 90.713 463 41 2 1843 2303 544618948 544619410 1.170000e-172 616.0
13 TraesCS3B01G156400 chrUn 91.775 462 34 4 1845 2303 41399675 41399215 6.940000e-180 640.0
14 TraesCS3B01G156400 chrUn 91.106 461 39 2 1845 2303 41581055 41580595 6.990000e-175 623.0
15 TraesCS3B01G156400 chr4A 91.145 463 39 2 1843 2303 647374651 647375113 5.400000e-176 627.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G156400 chr3B 149162024 149164326 2302 True 1457.800000 4253 100.000000 1 2303 3 chr3B.!!$R1 2302
1 TraesCS3B01G156400 chr3D 98588942 98590690 1748 True 2049.000000 2049 88.578000 146 1838 1 chr3D.!!$R1 1692
2 TraesCS3B01G156400 chr3A 116147485 116149246 1761 True 623.666667 780 88.389667 146 1838 3 chr3A.!!$R1 1692

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
24 25 0.036952 CTCCACTGAACACGGAGCAT 60.037 55.0 0.0 0.0 39.95 3.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1861 2060 0.107703 TTAATGCAGAGGCTGGGACG 60.108 55.0 0.0 0.0 41.91 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 0.594602 TCGTACTCCACTGAACACGG 59.405 55.000 0.00 0.00 31.86 4.94
20 21 0.594602 CGTACTCCACTGAACACGGA 59.405 55.000 0.00 0.00 0.00 4.69
22 23 4.268687 CTCCACTGAACACGGAGC 57.731 61.111 0.00 0.00 39.95 4.70
23 24 1.367471 CTCCACTGAACACGGAGCA 59.633 57.895 0.00 0.00 39.95 4.26
24 25 0.036952 CTCCACTGAACACGGAGCAT 60.037 55.000 0.00 0.00 39.95 3.79
25 26 0.320683 TCCACTGAACACGGAGCATG 60.321 55.000 0.00 0.00 0.00 4.06
26 27 1.300971 CCACTGAACACGGAGCATGG 61.301 60.000 0.00 0.00 0.00 3.66
27 28 0.603707 CACTGAACACGGAGCATGGT 60.604 55.000 0.00 0.00 0.00 3.55
28 29 0.108585 ACTGAACACGGAGCATGGTT 59.891 50.000 0.00 0.00 0.00 3.67
29 30 0.518636 CTGAACACGGAGCATGGTTG 59.481 55.000 0.00 0.00 0.00 3.77
30 31 0.888736 TGAACACGGAGCATGGTTGG 60.889 55.000 0.00 0.00 0.00 3.77
31 32 0.889186 GAACACGGAGCATGGTTGGT 60.889 55.000 0.00 0.00 35.95 3.67
32 33 0.467290 AACACGGAGCATGGTTGGTT 60.467 50.000 0.00 0.00 32.62 3.67
33 34 1.172180 ACACGGAGCATGGTTGGTTG 61.172 55.000 0.00 0.00 32.62 3.77
34 35 2.268076 ACGGAGCATGGTTGGTTGC 61.268 57.895 0.00 0.00 39.17 4.17
35 36 2.267351 CGGAGCATGGTTGGTTGCA 61.267 57.895 0.00 0.00 41.35 4.08
36 37 1.804396 CGGAGCATGGTTGGTTGCAA 61.804 55.000 0.00 0.00 41.35 4.08
37 38 0.319813 GGAGCATGGTTGGTTGCAAC 60.320 55.000 21.59 21.59 41.35 4.17
38 39 0.675633 GAGCATGGTTGGTTGCAACT 59.324 50.000 27.64 5.70 41.35 3.16
39 40 1.069049 GAGCATGGTTGGTTGCAACTT 59.931 47.619 27.64 4.94 41.35 2.66
40 41 1.202557 AGCATGGTTGGTTGCAACTTG 60.203 47.619 27.64 16.05 41.35 3.16
41 42 1.473080 GCATGGTTGGTTGCAACTTGT 60.473 47.619 27.64 7.02 38.72 3.16
42 43 2.223923 GCATGGTTGGTTGCAACTTGTA 60.224 45.455 27.64 12.06 38.72 2.41
43 44 3.739519 GCATGGTTGGTTGCAACTTGTAA 60.740 43.478 27.64 15.20 38.72 2.41
44 45 4.437239 CATGGTTGGTTGCAACTTGTAAA 58.563 39.130 27.64 12.46 35.54 2.01
45 46 4.744795 TGGTTGGTTGCAACTTGTAAAT 57.255 36.364 27.64 0.00 35.54 1.40
46 47 4.437239 TGGTTGGTTGCAACTTGTAAATG 58.563 39.130 27.64 0.00 35.54 2.32
47 48 4.160439 TGGTTGGTTGCAACTTGTAAATGA 59.840 37.500 27.64 2.36 35.54 2.57
48 49 5.112686 GGTTGGTTGCAACTTGTAAATGAA 58.887 37.500 27.64 5.71 35.54 2.57
49 50 5.006261 GGTTGGTTGCAACTTGTAAATGAAC 59.994 40.000 27.64 15.01 35.54 3.18
50 51 4.355437 TGGTTGCAACTTGTAAATGAACG 58.645 39.130 27.64 0.00 0.00 3.95
51 52 4.142359 TGGTTGCAACTTGTAAATGAACGT 60.142 37.500 27.64 0.00 0.00 3.99
52 53 4.206200 GGTTGCAACTTGTAAATGAACGTG 59.794 41.667 27.64 0.00 0.00 4.49
53 54 3.958704 TGCAACTTGTAAATGAACGTGG 58.041 40.909 0.00 0.00 0.00 4.94
54 55 3.243234 TGCAACTTGTAAATGAACGTGGG 60.243 43.478 0.00 0.00 0.00 4.61
55 56 3.243267 GCAACTTGTAAATGAACGTGGGT 60.243 43.478 0.00 0.00 0.00 4.51
56 57 4.533222 CAACTTGTAAATGAACGTGGGTC 58.467 43.478 0.00 0.00 0.00 4.46
57 58 4.081322 ACTTGTAAATGAACGTGGGTCT 57.919 40.909 0.00 0.00 0.00 3.85
58 59 4.062991 ACTTGTAAATGAACGTGGGTCTC 58.937 43.478 0.00 0.00 0.00 3.36
59 60 3.755112 TGTAAATGAACGTGGGTCTCA 57.245 42.857 0.00 0.00 0.00 3.27
60 61 3.659786 TGTAAATGAACGTGGGTCTCAG 58.340 45.455 0.00 0.00 0.00 3.35
61 62 3.322541 TGTAAATGAACGTGGGTCTCAGA 59.677 43.478 0.00 0.00 0.00 3.27
62 63 2.751166 AATGAACGTGGGTCTCAGAG 57.249 50.000 0.00 0.00 0.00 3.35
63 64 1.633774 ATGAACGTGGGTCTCAGAGT 58.366 50.000 0.00 0.00 0.00 3.24
64 65 1.410004 TGAACGTGGGTCTCAGAGTT 58.590 50.000 0.00 0.00 32.51 3.01
65 66 1.760613 TGAACGTGGGTCTCAGAGTTT 59.239 47.619 0.00 0.00 30.81 2.66
66 67 2.960384 TGAACGTGGGTCTCAGAGTTTA 59.040 45.455 0.00 0.00 30.81 2.01
67 68 3.243636 TGAACGTGGGTCTCAGAGTTTAC 60.244 47.826 0.00 0.00 30.81 2.01
68 69 2.313317 ACGTGGGTCTCAGAGTTTACA 58.687 47.619 0.00 0.00 0.00 2.41
69 70 2.035576 ACGTGGGTCTCAGAGTTTACAC 59.964 50.000 0.00 2.84 0.00 2.90
70 71 2.609737 CGTGGGTCTCAGAGTTTACACC 60.610 54.545 0.00 0.00 0.00 4.16
71 72 2.633481 GTGGGTCTCAGAGTTTACACCT 59.367 50.000 5.45 0.00 0.00 4.00
72 73 2.897969 TGGGTCTCAGAGTTTACACCTC 59.102 50.000 5.45 0.00 0.00 3.85
73 74 2.094649 GGGTCTCAGAGTTTACACCTCG 60.095 54.545 5.45 0.00 34.08 4.63
74 75 2.818432 GGTCTCAGAGTTTACACCTCGA 59.182 50.000 0.00 0.00 34.08 4.04
75 76 3.255149 GGTCTCAGAGTTTACACCTCGAA 59.745 47.826 0.00 0.00 34.08 3.71
76 77 4.261909 GGTCTCAGAGTTTACACCTCGAAA 60.262 45.833 0.00 0.00 34.08 3.46
77 78 4.680567 GTCTCAGAGTTTACACCTCGAAAC 59.319 45.833 0.00 0.00 36.08 2.78
78 79 4.340097 TCTCAGAGTTTACACCTCGAAACA 59.660 41.667 0.00 0.00 37.89 2.83
79 80 5.013568 TCAGAGTTTACACCTCGAAACAA 57.986 39.130 0.00 0.00 37.89 2.83
80 81 4.807304 TCAGAGTTTACACCTCGAAACAAC 59.193 41.667 0.00 0.00 37.89 3.32
81 82 4.809426 CAGAGTTTACACCTCGAAACAACT 59.191 41.667 0.00 0.00 37.89 3.16
82 83 5.293569 CAGAGTTTACACCTCGAAACAACTT 59.706 40.000 0.00 0.00 37.89 2.66
83 84 5.878669 AGAGTTTACACCTCGAAACAACTTT 59.121 36.000 0.00 0.00 37.89 2.66
84 85 6.373495 AGAGTTTACACCTCGAAACAACTTTT 59.627 34.615 0.00 0.00 37.89 2.27
85 86 6.916440 AGTTTACACCTCGAAACAACTTTTT 58.084 32.000 0.00 0.00 37.89 1.94
106 107 3.609703 TTGCGGTTGGTTGCAACT 58.390 50.000 27.64 0.00 45.45 3.16
107 108 1.893786 TTGCGGTTGGTTGCAACTT 59.106 47.368 27.64 0.00 45.45 2.66
108 109 0.459237 TTGCGGTTGGTTGCAACTTG 60.459 50.000 27.64 14.31 45.45 3.16
109 110 1.140804 GCGGTTGGTTGCAACTTGT 59.859 52.632 27.64 0.00 35.54 3.16
110 111 0.382515 GCGGTTGGTTGCAACTTGTA 59.617 50.000 27.64 10.37 35.54 2.41
111 112 1.202313 GCGGTTGGTTGCAACTTGTAA 60.202 47.619 27.64 15.20 35.54 2.41
112 113 2.735762 GCGGTTGGTTGCAACTTGTAAA 60.736 45.455 27.64 12.46 35.54 2.01
113 114 3.712187 CGGTTGGTTGCAACTTGTAAAT 58.288 40.909 27.64 0.00 35.54 1.40
114 115 3.489047 CGGTTGGTTGCAACTTGTAAATG 59.511 43.478 27.64 8.08 35.54 2.32
115 116 4.688021 GGTTGGTTGCAACTTGTAAATGA 58.312 39.130 27.64 2.58 35.54 2.57
116 117 5.112686 GGTTGGTTGCAACTTGTAAATGAA 58.887 37.500 27.64 5.71 35.54 2.57
117 118 5.006261 GGTTGGTTGCAACTTGTAAATGAAC 59.994 40.000 27.64 15.01 35.54 3.18
118 119 4.355437 TGGTTGCAACTTGTAAATGAACG 58.645 39.130 27.64 0.00 0.00 3.95
119 120 4.142359 TGGTTGCAACTTGTAAATGAACGT 60.142 37.500 27.64 0.00 0.00 3.99
120 121 4.206200 GGTTGCAACTTGTAAATGAACGTG 59.794 41.667 27.64 0.00 0.00 4.49
121 122 3.958704 TGCAACTTGTAAATGAACGTGG 58.041 40.909 0.00 0.00 0.00 4.94
122 123 3.243234 TGCAACTTGTAAATGAACGTGGG 60.243 43.478 0.00 0.00 0.00 4.61
123 124 3.243267 GCAACTTGTAAATGAACGTGGGT 60.243 43.478 0.00 0.00 0.00 4.51
124 125 4.533222 CAACTTGTAAATGAACGTGGGTC 58.467 43.478 0.00 0.00 0.00 4.46
125 126 2.803956 ACTTGTAAATGAACGTGGGTCG 59.196 45.455 0.00 0.00 46.00 4.79
126 127 2.816204 TGTAAATGAACGTGGGTCGA 57.184 45.000 0.00 0.00 42.86 4.20
127 128 3.109044 TGTAAATGAACGTGGGTCGAA 57.891 42.857 0.00 0.00 42.86 3.71
128 129 3.464907 TGTAAATGAACGTGGGTCGAAA 58.535 40.909 0.00 0.00 42.86 3.46
129 130 3.248125 TGTAAATGAACGTGGGTCGAAAC 59.752 43.478 0.00 0.00 42.86 2.78
130 131 1.956297 AATGAACGTGGGTCGAAACA 58.044 45.000 0.00 0.00 42.86 2.83
131 132 1.956297 ATGAACGTGGGTCGAAACAA 58.044 45.000 0.00 0.00 42.86 2.83
132 133 1.008329 TGAACGTGGGTCGAAACAAC 58.992 50.000 0.00 0.00 42.86 3.32
133 134 1.292992 GAACGTGGGTCGAAACAACT 58.707 50.000 0.00 0.00 42.86 3.16
134 135 2.159128 TGAACGTGGGTCGAAACAACTA 60.159 45.455 0.00 0.00 42.86 2.24
135 136 2.600470 ACGTGGGTCGAAACAACTAA 57.400 45.000 0.00 0.00 42.86 2.24
136 137 2.204237 ACGTGGGTCGAAACAACTAAC 58.796 47.619 0.00 0.00 42.86 2.34
137 138 2.159057 ACGTGGGTCGAAACAACTAACT 60.159 45.455 0.00 0.00 42.86 2.24
138 139 2.867975 CGTGGGTCGAAACAACTAACTT 59.132 45.455 0.00 0.00 42.86 2.66
139 140 3.060070 CGTGGGTCGAAACAACTAACTTC 60.060 47.826 0.00 0.00 42.86 3.01
140 141 4.124970 GTGGGTCGAAACAACTAACTTCT 58.875 43.478 0.00 0.00 0.00 2.85
141 142 4.025145 GTGGGTCGAAACAACTAACTTCTG 60.025 45.833 0.00 0.00 0.00 3.02
142 143 4.141892 TGGGTCGAAACAACTAACTTCTGA 60.142 41.667 0.00 0.00 0.00 3.27
143 144 4.812626 GGGTCGAAACAACTAACTTCTGAA 59.187 41.667 0.00 0.00 0.00 3.02
144 145 5.469084 GGGTCGAAACAACTAACTTCTGAAT 59.531 40.000 0.00 0.00 0.00 2.57
190 194 1.536284 GCGAACCGTAGAATGAGGGAG 60.536 57.143 0.00 0.00 0.00 4.30
209 213 3.750652 GGAGAAACAGAGAGCTGAAAAGG 59.249 47.826 0.00 0.00 45.17 3.11
300 304 5.838529 TGGATATCAGCAAATCAAAGCATG 58.161 37.500 4.83 0.00 0.00 4.06
337 342 3.190535 CCCAACAATCTAAGGTTGAACCG 59.809 47.826 8.98 0.00 45.50 4.44
354 359 2.499685 GGCCAGCCGTTACGATCT 59.500 61.111 6.24 0.00 0.00 2.75
355 360 1.737816 GGCCAGCCGTTACGATCTA 59.262 57.895 6.24 0.00 0.00 1.98
356 361 0.596859 GGCCAGCCGTTACGATCTAC 60.597 60.000 6.24 0.00 0.00 2.59
357 362 0.384669 GCCAGCCGTTACGATCTACT 59.615 55.000 6.24 0.00 0.00 2.57
358 363 1.864435 GCCAGCCGTTACGATCTACTG 60.864 57.143 6.24 5.63 0.00 2.74
359 364 1.478137 CAGCCGTTACGATCTACTGC 58.522 55.000 6.24 0.00 0.00 4.40
360 365 1.100510 AGCCGTTACGATCTACTGCA 58.899 50.000 6.24 0.00 0.00 4.41
361 366 1.475280 AGCCGTTACGATCTACTGCAA 59.525 47.619 6.24 0.00 0.00 4.08
362 367 2.100916 AGCCGTTACGATCTACTGCAAT 59.899 45.455 6.24 0.00 0.00 3.56
363 368 2.218759 GCCGTTACGATCTACTGCAATG 59.781 50.000 6.24 0.00 0.00 2.82
364 369 2.218759 CCGTTACGATCTACTGCAATGC 59.781 50.000 6.24 0.00 0.00 3.56
365 370 2.097877 CGTTACGATCTACTGCAATGCG 60.098 50.000 0.00 0.00 0.00 4.73
404 419 2.367202 GGCCCGGTGAGGATTCTGA 61.367 63.158 0.00 0.00 45.00 3.27
426 444 1.797537 GATGAAAGCAACCGCACGC 60.798 57.895 0.00 0.00 42.27 5.34
855 905 2.577644 GCGATGTGCATGTTGGCG 60.578 61.111 0.00 0.00 45.45 5.69
856 906 2.577644 CGATGTGCATGTTGGCGC 60.578 61.111 0.00 0.00 44.35 6.53
857 907 2.202650 GATGTGCATGTTGGCGCC 60.203 61.111 22.73 22.73 43.47 6.53
860 910 2.431260 GTGCATGTTGGCGCCTTG 60.431 61.111 29.70 19.72 38.32 3.61
879 929 1.962807 TGGAACAGCAATTTGACAGGG 59.037 47.619 0.00 0.00 0.00 4.45
882 932 3.181466 GGAACAGCAATTTGACAGGGTTT 60.181 43.478 0.00 0.00 0.00 3.27
883 933 3.733443 ACAGCAATTTGACAGGGTTTC 57.267 42.857 0.00 0.00 0.00 2.78
888 938 4.219288 AGCAATTTGACAGGGTTTCTGATC 59.781 41.667 0.00 0.00 46.18 2.92
889 939 4.619160 GCAATTTGACAGGGTTTCTGATCC 60.619 45.833 0.00 0.00 46.18 3.36
890 940 4.664688 ATTTGACAGGGTTTCTGATCCT 57.335 40.909 0.00 0.00 46.18 3.24
892 942 2.907892 TGACAGGGTTTCTGATCCTCT 58.092 47.619 0.00 0.00 46.18 3.69
893 943 2.834549 TGACAGGGTTTCTGATCCTCTC 59.165 50.000 0.00 0.00 46.18 3.20
894 944 2.169561 GACAGGGTTTCTGATCCTCTCC 59.830 54.545 0.00 0.00 46.18 3.71
895 945 2.225753 ACAGGGTTTCTGATCCTCTCCT 60.226 50.000 0.00 0.00 46.18 3.69
949 1030 0.181587 TCTCCTCGCAAAACCCACAA 59.818 50.000 0.00 0.00 0.00 3.33
1042 1150 1.018148 GATCGTCTTCTCGCTCCTGA 58.982 55.000 0.00 0.00 0.00 3.86
1109 1217 4.162690 GGCGGATGGCGAAGGAGT 62.163 66.667 0.00 0.00 44.92 3.85
1112 1220 1.067582 CGGATGGCGAAGGAGTACC 59.932 63.158 0.00 0.00 0.00 3.34
1337 1454 7.696755 TCAAGTTCTTTCGTGCGTATATACTA 58.303 34.615 11.05 0.00 0.00 1.82
1338 1455 7.641411 TCAAGTTCTTTCGTGCGTATATACTAC 59.359 37.037 11.05 8.70 0.00 2.73
1339 1456 7.256756 AGTTCTTTCGTGCGTATATACTACT 57.743 36.000 11.05 0.00 0.00 2.57
1388 1511 5.812642 AGCTTGATTTCCACATCTAACTACG 59.187 40.000 0.00 0.00 0.00 3.51
1389 1512 5.581085 GCTTGATTTCCACATCTAACTACGT 59.419 40.000 0.00 0.00 0.00 3.57
1390 1513 6.455646 GCTTGATTTCCACATCTAACTACGTG 60.456 42.308 0.00 0.00 0.00 4.49
1416 1544 1.804326 CTTGTAACGCGAGGGTCGG 60.804 63.158 15.93 0.00 40.84 4.79
1521 1667 4.989044 TGAGACGTGATATCAACGCTTAA 58.011 39.130 20.36 11.84 0.00 1.85
1645 1826 2.251963 CGTTGCGTGCATTGCTCA 59.748 55.556 10.49 2.71 0.00 4.26
1686 1868 2.818130 TTGACCTGAAATGGCAAAGC 57.182 45.000 0.00 0.00 0.00 3.51
1720 1908 0.107508 ATCAGATGCCAGACCAACCG 60.108 55.000 0.00 0.00 0.00 4.44
1739 1927 0.901580 GAAGGGTCCCTCCACGTACA 60.902 60.000 12.07 0.00 38.11 2.90
1742 1930 1.219724 AGGGTCCCTCCACGTACATAT 59.780 52.381 3.85 0.00 38.11 1.78
1765 1958 2.819595 CGGATGCGGAAGGTGGTG 60.820 66.667 0.00 0.00 0.00 4.17
1805 2004 1.349688 AGTCCGTGCTTAATGGGTTGA 59.650 47.619 0.00 0.00 35.39 3.18
1838 2037 5.974108 TCGGAGCACTAATTTTAGTAGCTT 58.026 37.500 19.18 10.02 42.52 3.74
1839 2038 6.403878 TCGGAGCACTAATTTTAGTAGCTTT 58.596 36.000 19.18 7.21 42.52 3.51
1840 2039 6.877322 TCGGAGCACTAATTTTAGTAGCTTTT 59.123 34.615 19.18 6.76 42.52 2.27
1841 2040 6.961554 CGGAGCACTAATTTTAGTAGCTTTTG 59.038 38.462 19.18 12.72 42.52 2.44
1842 2041 7.360946 CGGAGCACTAATTTTAGTAGCTTTTGT 60.361 37.037 19.18 6.29 42.52 2.83
1843 2042 8.297426 GGAGCACTAATTTTAGTAGCTTTTGTT 58.703 33.333 19.18 5.84 42.52 2.83
1844 2043 9.678941 GAGCACTAATTTTAGTAGCTTTTGTTT 57.321 29.630 19.18 5.38 42.52 2.83
1865 2064 2.805277 TCGAAAAGCGAGTTCGTCC 58.195 52.632 15.70 0.00 45.59 4.79
1866 2065 0.665369 TCGAAAAGCGAGTTCGTCCC 60.665 55.000 15.70 0.00 45.59 4.46
1867 2066 0.942410 CGAAAAGCGAGTTCGTCCCA 60.942 55.000 10.19 0.00 44.57 4.37
1868 2067 0.790814 GAAAAGCGAGTTCGTCCCAG 59.209 55.000 3.27 0.00 42.22 4.45
1869 2068 1.228657 AAAAGCGAGTTCGTCCCAGC 61.229 55.000 3.27 0.00 42.22 4.85
1870 2069 3.591254 AAGCGAGTTCGTCCCAGCC 62.591 63.158 3.27 0.00 42.22 4.85
1871 2070 4.070552 GCGAGTTCGTCCCAGCCT 62.071 66.667 3.27 0.00 42.22 4.58
1872 2071 2.182030 CGAGTTCGTCCCAGCCTC 59.818 66.667 0.00 0.00 34.11 4.70
1873 2072 2.344203 CGAGTTCGTCCCAGCCTCT 61.344 63.158 0.00 0.00 34.11 3.69
1874 2073 1.216710 GAGTTCGTCCCAGCCTCTG 59.783 63.158 0.00 0.00 0.00 3.35
1875 2074 2.435059 GTTCGTCCCAGCCTCTGC 60.435 66.667 0.00 0.00 37.95 4.26
1876 2075 2.922503 TTCGTCCCAGCCTCTGCA 60.923 61.111 0.00 0.00 41.13 4.41
1877 2076 2.293318 TTCGTCCCAGCCTCTGCAT 61.293 57.895 0.00 0.00 41.13 3.96
1878 2077 1.841302 TTCGTCCCAGCCTCTGCATT 61.841 55.000 0.00 0.00 41.13 3.56
1879 2078 0.975556 TCGTCCCAGCCTCTGCATTA 60.976 55.000 0.00 0.00 41.13 1.90
1880 2079 0.107703 CGTCCCAGCCTCTGCATTAA 60.108 55.000 0.00 0.00 41.13 1.40
1881 2080 1.678728 CGTCCCAGCCTCTGCATTAAA 60.679 52.381 0.00 0.00 41.13 1.52
1882 2081 2.446435 GTCCCAGCCTCTGCATTAAAA 58.554 47.619 0.00 0.00 41.13 1.52
1883 2082 2.825532 GTCCCAGCCTCTGCATTAAAAA 59.174 45.455 0.00 0.00 41.13 1.94
1884 2083 3.091545 TCCCAGCCTCTGCATTAAAAAG 58.908 45.455 0.00 0.00 41.13 2.27
1885 2084 3.091545 CCCAGCCTCTGCATTAAAAAGA 58.908 45.455 0.00 0.00 41.13 2.52
1886 2085 3.703052 CCCAGCCTCTGCATTAAAAAGAT 59.297 43.478 0.00 0.00 41.13 2.40
1887 2086 4.441079 CCCAGCCTCTGCATTAAAAAGATG 60.441 45.833 0.00 0.00 41.13 2.90
1895 2094 4.954238 GCATTAAAAAGATGCATACGGC 57.046 40.909 0.00 0.00 46.96 5.68
1896 2095 4.610945 GCATTAAAAAGATGCATACGGCT 58.389 39.130 0.00 0.00 46.96 5.52
1897 2096 5.757886 GCATTAAAAAGATGCATACGGCTA 58.242 37.500 0.00 0.00 46.96 3.93
1898 2097 6.205784 GCATTAAAAAGATGCATACGGCTAA 58.794 36.000 0.00 0.00 46.96 3.09
1899 2098 6.863126 GCATTAAAAAGATGCATACGGCTAAT 59.137 34.615 0.00 0.00 46.96 1.73
1900 2099 8.020819 GCATTAAAAAGATGCATACGGCTAATA 58.979 33.333 0.00 0.00 46.96 0.98
1934 2133 7.929941 AATAAAAGATCCAACAAGAGTCTCC 57.070 36.000 0.00 0.00 0.00 3.71
1935 2134 4.982241 AAAGATCCAACAAGAGTCTCCA 57.018 40.909 0.00 0.00 0.00 3.86
1936 2135 4.982241 AAGATCCAACAAGAGTCTCCAA 57.018 40.909 0.00 0.00 0.00 3.53
1937 2136 4.550076 AGATCCAACAAGAGTCTCCAAG 57.450 45.455 0.00 0.00 0.00 3.61
1938 2137 3.906846 AGATCCAACAAGAGTCTCCAAGT 59.093 43.478 0.00 0.00 0.00 3.16
1939 2138 3.753294 TCCAACAAGAGTCTCCAAGTC 57.247 47.619 0.00 0.00 0.00 3.01
1940 2139 3.309296 TCCAACAAGAGTCTCCAAGTCT 58.691 45.455 0.00 0.00 39.47 3.24
1941 2140 3.322254 TCCAACAAGAGTCTCCAAGTCTC 59.678 47.826 0.00 0.00 36.61 3.36
1942 2141 3.070159 CCAACAAGAGTCTCCAAGTCTCA 59.930 47.826 0.00 0.00 36.61 3.27
1943 2142 4.054671 CAACAAGAGTCTCCAAGTCTCAC 58.945 47.826 0.00 0.00 36.61 3.51
1944 2143 3.300388 ACAAGAGTCTCCAAGTCTCACA 58.700 45.455 0.00 0.00 36.61 3.58
1945 2144 3.068873 ACAAGAGTCTCCAAGTCTCACAC 59.931 47.826 0.00 0.00 36.61 3.82
1946 2145 2.950781 AGAGTCTCCAAGTCTCACACA 58.049 47.619 0.00 0.00 33.71 3.72
1947 2146 2.625790 AGAGTCTCCAAGTCTCACACAC 59.374 50.000 0.00 0.00 33.71 3.82
1948 2147 2.362397 GAGTCTCCAAGTCTCACACACA 59.638 50.000 0.00 0.00 31.99 3.72
1949 2148 2.363680 AGTCTCCAAGTCTCACACACAG 59.636 50.000 0.00 0.00 0.00 3.66
1950 2149 2.101582 GTCTCCAAGTCTCACACACAGT 59.898 50.000 0.00 0.00 0.00 3.55
1951 2150 3.318275 GTCTCCAAGTCTCACACACAGTA 59.682 47.826 0.00 0.00 0.00 2.74
1952 2151 3.570125 TCTCCAAGTCTCACACACAGTAG 59.430 47.826 0.00 0.00 0.00 2.57
1953 2152 3.296854 TCCAAGTCTCACACACAGTAGT 58.703 45.455 0.00 0.00 0.00 2.73
1954 2153 4.466827 TCCAAGTCTCACACACAGTAGTA 58.533 43.478 0.00 0.00 0.00 1.82
1955 2154 4.891168 TCCAAGTCTCACACACAGTAGTAA 59.109 41.667 0.00 0.00 0.00 2.24
1956 2155 5.361571 TCCAAGTCTCACACACAGTAGTAAA 59.638 40.000 0.00 0.00 0.00 2.01
1957 2156 5.462398 CCAAGTCTCACACACAGTAGTAAAC 59.538 44.000 0.00 0.00 0.00 2.01
1958 2157 5.847111 AGTCTCACACACAGTAGTAAACA 57.153 39.130 0.00 0.00 0.00 2.83
1959 2158 6.216801 AGTCTCACACACAGTAGTAAACAA 57.783 37.500 0.00 0.00 0.00 2.83
1960 2159 6.636705 AGTCTCACACACAGTAGTAAACAAA 58.363 36.000 0.00 0.00 0.00 2.83
1961 2160 7.272978 AGTCTCACACACAGTAGTAAACAAAT 58.727 34.615 0.00 0.00 0.00 2.32
1962 2161 7.224753 AGTCTCACACACAGTAGTAAACAAATG 59.775 37.037 0.00 0.00 0.00 2.32
1963 2162 6.018262 TCTCACACACAGTAGTAAACAAATGC 60.018 38.462 0.00 0.00 0.00 3.56
1964 2163 5.820423 TCACACACAGTAGTAAACAAATGCT 59.180 36.000 0.00 0.00 0.00 3.79
1965 2164 6.018262 TCACACACAGTAGTAAACAAATGCTC 60.018 38.462 0.00 0.00 0.00 4.26
1966 2165 5.820423 ACACACAGTAGTAAACAAATGCTCA 59.180 36.000 0.00 0.00 0.00 4.26
1967 2166 6.136071 CACACAGTAGTAAACAAATGCTCAC 58.864 40.000 0.00 0.00 0.00 3.51
1968 2167 5.050363 ACACAGTAGTAAACAAATGCTCACG 60.050 40.000 0.00 0.00 0.00 4.35
1969 2168 5.176774 CACAGTAGTAAACAAATGCTCACGA 59.823 40.000 0.00 0.00 0.00 4.35
1970 2169 5.756347 ACAGTAGTAAACAAATGCTCACGAA 59.244 36.000 0.00 0.00 0.00 3.85
1971 2170 6.073765 ACAGTAGTAAACAAATGCTCACGAAG 60.074 38.462 0.00 0.00 0.00 3.79
1972 2171 6.145534 CAGTAGTAAACAAATGCTCACGAAGA 59.854 38.462 0.00 0.00 0.00 2.87
1984 2183 4.472691 CTCACGAAGAGCAAAACATGAA 57.527 40.909 0.00 0.00 37.59 2.57
1985 2184 4.847633 CTCACGAAGAGCAAAACATGAAA 58.152 39.130 0.00 0.00 37.59 2.69
1986 2185 5.242069 TCACGAAGAGCAAAACATGAAAA 57.758 34.783 0.00 0.00 0.00 2.29
1987 2186 5.273170 TCACGAAGAGCAAAACATGAAAAG 58.727 37.500 0.00 0.00 0.00 2.27
1988 2187 4.044426 ACGAAGAGCAAAACATGAAAAGC 58.956 39.130 0.00 0.00 0.00 3.51
1989 2188 4.043750 CGAAGAGCAAAACATGAAAAGCA 58.956 39.130 0.00 0.00 0.00 3.91
1990 2189 4.503734 CGAAGAGCAAAACATGAAAAGCAA 59.496 37.500 0.00 0.00 0.00 3.91
1991 2190 5.005586 CGAAGAGCAAAACATGAAAAGCAAA 59.994 36.000 0.00 0.00 0.00 3.68
1992 2191 5.978934 AGAGCAAAACATGAAAAGCAAAG 57.021 34.783 0.00 0.00 0.00 2.77
1993 2192 4.271776 AGAGCAAAACATGAAAAGCAAAGC 59.728 37.500 0.00 0.00 0.00 3.51
1994 2193 3.313249 AGCAAAACATGAAAAGCAAAGCC 59.687 39.130 0.00 0.00 0.00 4.35
1995 2194 3.065095 GCAAAACATGAAAAGCAAAGCCA 59.935 39.130 0.00 0.00 0.00 4.75
1996 2195 4.590226 CAAAACATGAAAAGCAAAGCCAC 58.410 39.130 0.00 0.00 0.00 5.01
1997 2196 3.540314 AACATGAAAAGCAAAGCCACA 57.460 38.095 0.00 0.00 0.00 4.17
1998 2197 3.540314 ACATGAAAAGCAAAGCCACAA 57.460 38.095 0.00 0.00 0.00 3.33
1999 2198 3.197265 ACATGAAAAGCAAAGCCACAAC 58.803 40.909 0.00 0.00 0.00 3.32
2000 2199 2.307934 TGAAAAGCAAAGCCACAACC 57.692 45.000 0.00 0.00 0.00 3.77
2001 2200 1.208259 GAAAAGCAAAGCCACAACCG 58.792 50.000 0.00 0.00 0.00 4.44
2002 2201 0.179086 AAAAGCAAAGCCACAACCGG 60.179 50.000 0.00 0.00 0.00 5.28
2010 2209 2.045438 CCACAACCGGCTGGCATA 60.045 61.111 12.89 0.00 39.70 3.14
2011 2210 1.677300 CCACAACCGGCTGGCATAA 60.677 57.895 12.89 0.00 39.70 1.90
2012 2211 1.247419 CCACAACCGGCTGGCATAAA 61.247 55.000 12.89 0.00 39.70 1.40
2013 2212 0.600557 CACAACCGGCTGGCATAAAA 59.399 50.000 12.89 0.00 39.70 1.52
2014 2213 1.000283 CACAACCGGCTGGCATAAAAA 60.000 47.619 12.89 0.00 39.70 1.94
2047 2246 7.840931 CACTACATGCCTATCCTATTACATGA 58.159 38.462 0.00 0.00 38.55 3.07
2048 2247 7.761704 CACTACATGCCTATCCTATTACATGAC 59.238 40.741 0.00 0.00 38.55 3.06
2049 2248 6.054860 ACATGCCTATCCTATTACATGACC 57.945 41.667 0.00 0.00 38.55 4.02
2050 2249 4.801330 TGCCTATCCTATTACATGACCG 57.199 45.455 0.00 0.00 0.00 4.79
2051 2250 3.056107 TGCCTATCCTATTACATGACCGC 60.056 47.826 0.00 0.00 0.00 5.68
2052 2251 3.679083 GCCTATCCTATTACATGACCGCC 60.679 52.174 0.00 0.00 0.00 6.13
2053 2252 3.513912 CCTATCCTATTACATGACCGCCA 59.486 47.826 0.00 0.00 0.00 5.69
2054 2253 4.162320 CCTATCCTATTACATGACCGCCAT 59.838 45.833 0.00 0.00 35.44 4.40
2055 2254 3.678056 TCCTATTACATGACCGCCATC 57.322 47.619 0.00 0.00 31.94 3.51
2056 2255 2.301870 TCCTATTACATGACCGCCATCC 59.698 50.000 0.00 0.00 31.94 3.51
2057 2256 2.038426 CCTATTACATGACCGCCATCCA 59.962 50.000 0.00 0.00 31.94 3.41
2058 2257 2.727123 ATTACATGACCGCCATCCAA 57.273 45.000 0.00 0.00 31.94 3.53
2059 2258 2.498644 TTACATGACCGCCATCCAAA 57.501 45.000 0.00 0.00 31.94 3.28
2060 2259 1.745232 TACATGACCGCCATCCAAAC 58.255 50.000 0.00 0.00 31.94 2.93
2061 2260 0.965363 ACATGACCGCCATCCAAACC 60.965 55.000 0.00 0.00 31.94 3.27
2062 2261 0.680921 CATGACCGCCATCCAAACCT 60.681 55.000 0.00 0.00 31.94 3.50
2063 2262 0.680921 ATGACCGCCATCCAAACCTG 60.681 55.000 0.00 0.00 0.00 4.00
2064 2263 1.303317 GACCGCCATCCAAACCTGT 60.303 57.895 0.00 0.00 0.00 4.00
2065 2264 0.893727 GACCGCCATCCAAACCTGTT 60.894 55.000 0.00 0.00 0.00 3.16
2066 2265 1.178534 ACCGCCATCCAAACCTGTTG 61.179 55.000 0.00 0.00 0.00 3.33
2067 2266 0.893270 CCGCCATCCAAACCTGTTGA 60.893 55.000 0.00 0.00 0.00 3.18
2068 2267 0.958091 CGCCATCCAAACCTGTTGAA 59.042 50.000 0.00 0.00 0.00 2.69
2069 2268 1.339610 CGCCATCCAAACCTGTTGAAA 59.660 47.619 0.00 0.00 0.00 2.69
2070 2269 2.223923 CGCCATCCAAACCTGTTGAAAA 60.224 45.455 0.00 0.00 0.00 2.29
2071 2270 3.554752 CGCCATCCAAACCTGTTGAAAAT 60.555 43.478 0.00 0.00 0.00 1.82
2072 2271 4.321601 CGCCATCCAAACCTGTTGAAAATA 60.322 41.667 0.00 0.00 0.00 1.40
2073 2272 5.624281 CGCCATCCAAACCTGTTGAAAATAT 60.624 40.000 0.00 0.00 0.00 1.28
2074 2273 5.812127 GCCATCCAAACCTGTTGAAAATATC 59.188 40.000 0.00 0.00 0.00 1.63
2075 2274 6.340522 CCATCCAAACCTGTTGAAAATATCC 58.659 40.000 0.00 0.00 0.00 2.59
2076 2275 5.993748 TCCAAACCTGTTGAAAATATCCC 57.006 39.130 0.00 0.00 0.00 3.85
2077 2276 4.461081 TCCAAACCTGTTGAAAATATCCCG 59.539 41.667 0.00 0.00 0.00 5.14
2078 2277 4.219725 CCAAACCTGTTGAAAATATCCCGT 59.780 41.667 0.00 0.00 0.00 5.28
2079 2278 5.160641 CAAACCTGTTGAAAATATCCCGTG 58.839 41.667 0.00 0.00 0.00 4.94
2080 2279 2.752903 ACCTGTTGAAAATATCCCGTGC 59.247 45.455 0.00 0.00 0.00 5.34
2081 2280 3.016736 CCTGTTGAAAATATCCCGTGCT 58.983 45.455 0.00 0.00 0.00 4.40
2082 2281 4.196193 CCTGTTGAAAATATCCCGTGCTA 58.804 43.478 0.00 0.00 0.00 3.49
2083 2282 4.035208 CCTGTTGAAAATATCCCGTGCTAC 59.965 45.833 0.00 0.00 0.00 3.58
2084 2283 3.942748 TGTTGAAAATATCCCGTGCTACC 59.057 43.478 0.00 0.00 0.00 3.18
2085 2284 3.916359 TGAAAATATCCCGTGCTACCA 57.084 42.857 0.00 0.00 0.00 3.25
2086 2285 4.431416 TGAAAATATCCCGTGCTACCAT 57.569 40.909 0.00 0.00 0.00 3.55
2087 2286 4.385825 TGAAAATATCCCGTGCTACCATC 58.614 43.478 0.00 0.00 0.00 3.51
2088 2287 4.102524 TGAAAATATCCCGTGCTACCATCT 59.897 41.667 0.00 0.00 0.00 2.90
2089 2288 3.963428 AATATCCCGTGCTACCATCTC 57.037 47.619 0.00 0.00 0.00 2.75
2090 2289 1.629043 TATCCCGTGCTACCATCTCC 58.371 55.000 0.00 0.00 0.00 3.71
2091 2290 1.122019 ATCCCGTGCTACCATCTCCC 61.122 60.000 0.00 0.00 0.00 4.30
2092 2291 2.063979 CCCGTGCTACCATCTCCCA 61.064 63.158 0.00 0.00 0.00 4.37
2093 2292 1.410850 CCCGTGCTACCATCTCCCAT 61.411 60.000 0.00 0.00 0.00 4.00
2094 2293 0.034059 CCGTGCTACCATCTCCCATC 59.966 60.000 0.00 0.00 0.00 3.51
2095 2294 0.319040 CGTGCTACCATCTCCCATCG 60.319 60.000 0.00 0.00 0.00 3.84
2096 2295 0.034059 GTGCTACCATCTCCCATCGG 59.966 60.000 0.00 0.00 0.00 4.18
2097 2296 1.121407 TGCTACCATCTCCCATCGGG 61.121 60.000 0.00 0.00 46.11 5.14
2098 2297 1.122019 GCTACCATCTCCCATCGGGT 61.122 60.000 0.00 0.00 44.74 5.28
2099 2298 1.826042 GCTACCATCTCCCATCGGGTA 60.826 57.143 0.00 0.00 44.74 3.69
2100 2299 2.171840 CTACCATCTCCCATCGGGTAG 58.828 57.143 0.00 0.00 44.74 3.18
2101 2300 0.561184 ACCATCTCCCATCGGGTAGA 59.439 55.000 0.00 1.72 44.74 2.59
2102 2301 0.969894 CCATCTCCCATCGGGTAGAC 59.030 60.000 0.00 0.00 44.74 2.59
2103 2302 0.598562 CATCTCCCATCGGGTAGACG 59.401 60.000 0.00 0.00 44.74 4.18
2104 2303 1.179814 ATCTCCCATCGGGTAGACGC 61.180 60.000 0.00 0.00 44.74 5.19
2105 2304 2.043752 TCCCATCGGGTAGACGCA 60.044 61.111 0.00 0.00 44.74 5.24
2106 2305 2.076622 CTCCCATCGGGTAGACGCAG 62.077 65.000 0.00 0.00 44.74 5.18
2107 2306 2.423898 CCCATCGGGTAGACGCAGT 61.424 63.158 0.00 0.00 40.95 4.40
2108 2307 1.105167 CCCATCGGGTAGACGCAGTA 61.105 60.000 0.00 0.00 38.75 2.74
2109 2308 2.628905 CCCATCGGGTAGACGCAGTAA 61.629 57.143 0.00 0.00 38.75 2.24
2110 2309 4.719916 CCCATCGGGTAGACGCAGTAAC 62.720 59.091 0.00 0.00 38.75 2.50
2118 2317 4.449391 ACGCAGTAACCAAACGCT 57.551 50.000 0.00 0.00 41.94 5.07
2119 2318 2.231820 ACGCAGTAACCAAACGCTC 58.768 52.632 0.00 0.00 41.94 5.03
2120 2319 1.226030 ACGCAGTAACCAAACGCTCC 61.226 55.000 0.00 0.00 41.94 4.70
2121 2320 1.873863 GCAGTAACCAAACGCTCCC 59.126 57.895 0.00 0.00 0.00 4.30
2122 2321 0.605589 GCAGTAACCAAACGCTCCCT 60.606 55.000 0.00 0.00 0.00 4.20
2123 2322 1.156736 CAGTAACCAAACGCTCCCTG 58.843 55.000 0.00 0.00 0.00 4.45
2124 2323 0.036306 AGTAACCAAACGCTCCCTGG 59.964 55.000 0.00 0.00 36.24 4.45
2125 2324 1.302993 TAACCAAACGCTCCCTGGC 60.303 57.895 0.00 0.00 33.19 4.85
2126 2325 2.757980 TAACCAAACGCTCCCTGGCC 62.758 60.000 0.00 0.00 33.19 5.36
2127 2326 4.351054 CCAAACGCTCCCTGGCCT 62.351 66.667 3.32 0.00 0.00 5.19
2128 2327 2.747855 CAAACGCTCCCTGGCCTC 60.748 66.667 3.32 0.00 0.00 4.70
2129 2328 4.035102 AAACGCTCCCTGGCCTCC 62.035 66.667 3.32 0.00 0.00 4.30
2137 2336 3.470888 CCTGGCCTCCGTCGGAAT 61.471 66.667 16.23 0.00 0.00 3.01
2138 2337 2.202932 CTGGCCTCCGTCGGAATG 60.203 66.667 16.23 10.58 0.00 2.67
2139 2338 2.682136 TGGCCTCCGTCGGAATGA 60.682 61.111 16.23 0.00 0.00 2.57
2140 2339 2.107141 GGCCTCCGTCGGAATGAG 59.893 66.667 16.23 3.20 0.00 2.90
2141 2340 2.722201 GGCCTCCGTCGGAATGAGT 61.722 63.158 16.23 0.00 0.00 3.41
2142 2341 1.389609 GGCCTCCGTCGGAATGAGTA 61.390 60.000 16.23 0.00 0.00 2.59
2143 2342 0.030908 GCCTCCGTCGGAATGAGTAG 59.969 60.000 16.23 1.25 0.00 2.57
2144 2343 0.030908 CCTCCGTCGGAATGAGTAGC 59.969 60.000 16.23 0.00 0.00 3.58
2145 2344 0.317103 CTCCGTCGGAATGAGTAGCG 60.317 60.000 16.23 0.00 0.00 4.26
2146 2345 0.745486 TCCGTCGGAATGAGTAGCGA 60.745 55.000 12.68 0.00 0.00 4.93
2147 2346 0.591741 CCGTCGGAATGAGTAGCGAC 60.592 60.000 4.91 0.00 0.00 5.19
2148 2347 0.591741 CGTCGGAATGAGTAGCGACC 60.592 60.000 0.00 0.00 0.00 4.79
2149 2348 0.454600 GTCGGAATGAGTAGCGACCA 59.545 55.000 0.00 0.00 0.00 4.02
2150 2349 0.454600 TCGGAATGAGTAGCGACCAC 59.545 55.000 0.00 0.00 0.00 4.16
2151 2350 0.172578 CGGAATGAGTAGCGACCACA 59.827 55.000 0.00 0.00 0.00 4.17
2152 2351 1.202417 CGGAATGAGTAGCGACCACAT 60.202 52.381 0.00 0.00 0.00 3.21
2153 2352 2.034179 CGGAATGAGTAGCGACCACATA 59.966 50.000 7.43 0.00 0.00 2.29
2154 2353 3.381949 GGAATGAGTAGCGACCACATAC 58.618 50.000 7.43 2.44 0.00 2.39
2155 2354 2.776312 ATGAGTAGCGACCACATACG 57.224 50.000 5.70 0.00 0.00 3.06
2156 2355 0.736636 TGAGTAGCGACCACATACGG 59.263 55.000 0.00 0.00 0.00 4.02
2157 2356 1.019673 GAGTAGCGACCACATACGGA 58.980 55.000 0.00 0.00 0.00 4.69
2158 2357 1.607628 GAGTAGCGACCACATACGGAT 59.392 52.381 0.00 0.00 0.00 4.18
2159 2358 1.607628 AGTAGCGACCACATACGGATC 59.392 52.381 0.00 0.00 0.00 3.36
2160 2359 1.335810 GTAGCGACCACATACGGATCA 59.664 52.381 0.00 0.00 0.00 2.92
2161 2360 0.821517 AGCGACCACATACGGATCAA 59.178 50.000 0.00 0.00 0.00 2.57
2162 2361 1.412710 AGCGACCACATACGGATCAAT 59.587 47.619 0.00 0.00 0.00 2.57
2163 2362 1.526887 GCGACCACATACGGATCAATG 59.473 52.381 0.00 0.00 0.00 2.82
2164 2363 1.526887 CGACCACATACGGATCAATGC 59.473 52.381 0.00 0.00 0.00 3.56
2165 2364 2.560504 GACCACATACGGATCAATGCA 58.439 47.619 0.00 0.00 0.00 3.96
2166 2365 2.545526 GACCACATACGGATCAATGCAG 59.454 50.000 0.00 0.00 0.00 4.41
2167 2366 2.092968 ACCACATACGGATCAATGCAGT 60.093 45.455 0.00 0.00 0.00 4.40
2168 2367 2.288729 CCACATACGGATCAATGCAGTG 59.711 50.000 8.08 8.08 0.00 3.66
2169 2368 2.288729 CACATACGGATCAATGCAGTGG 59.711 50.000 15.06 0.03 0.00 4.00
2170 2369 2.092968 ACATACGGATCAATGCAGTGGT 60.093 45.455 15.06 7.06 0.00 4.16
2171 2370 2.309528 TACGGATCAATGCAGTGGTC 57.690 50.000 18.89 18.89 0.00 4.02
2172 2371 0.392998 ACGGATCAATGCAGTGGTCC 60.393 55.000 31.82 31.82 44.25 4.46
2173 2372 0.107508 CGGATCAATGCAGTGGTCCT 60.108 55.000 35.87 11.28 45.34 3.85
2174 2373 1.386533 GGATCAATGCAGTGGTCCTG 58.613 55.000 33.61 0.00 44.30 3.86
2175 2374 1.065199 GGATCAATGCAGTGGTCCTGA 60.065 52.381 33.61 6.31 44.30 3.86
2176 2375 2.286872 GATCAATGCAGTGGTCCTGAG 58.713 52.381 16.46 0.00 44.49 3.35
2177 2376 0.325933 TCAATGCAGTGGTCCTGAGG 59.674 55.000 15.06 0.00 44.49 3.86
2178 2377 0.325933 CAATGCAGTGGTCCTGAGGA 59.674 55.000 6.18 0.00 44.49 3.71
2179 2378 1.064906 CAATGCAGTGGTCCTGAGGAT 60.065 52.381 3.65 0.00 44.49 3.24
2180 2379 2.171237 CAATGCAGTGGTCCTGAGGATA 59.829 50.000 3.65 0.00 44.49 2.59
2181 2380 1.951209 TGCAGTGGTCCTGAGGATAA 58.049 50.000 3.65 0.00 44.49 1.75
2182 2381 1.555075 TGCAGTGGTCCTGAGGATAAC 59.445 52.381 3.65 6.43 44.49 1.89
2183 2382 1.134371 GCAGTGGTCCTGAGGATAACC 60.134 57.143 3.65 2.12 44.49 2.85
2232 2431 9.638239 TTCTGTTAAAAACCATATCATTTCTGC 57.362 29.630 0.00 0.00 0.00 4.26
2233 2432 8.801299 TCTGTTAAAAACCATATCATTTCTGCA 58.199 29.630 0.00 0.00 0.00 4.41
2234 2433 8.984891 TGTTAAAAACCATATCATTTCTGCAG 57.015 30.769 7.63 7.63 0.00 4.41
2235 2434 8.584157 TGTTAAAAACCATATCATTTCTGCAGT 58.416 29.630 14.67 0.00 0.00 4.40
2236 2435 9.423061 GTTAAAAACCATATCATTTCTGCAGTT 57.577 29.630 14.67 0.00 0.00 3.16
2237 2436 9.638239 TTAAAAACCATATCATTTCTGCAGTTC 57.362 29.630 14.67 0.00 0.00 3.01
2238 2437 5.841957 AACCATATCATTTCTGCAGTTCC 57.158 39.130 14.67 0.00 0.00 3.62
2239 2438 4.858850 ACCATATCATTTCTGCAGTTCCA 58.141 39.130 14.67 0.00 0.00 3.53
2240 2439 4.885907 ACCATATCATTTCTGCAGTTCCAG 59.114 41.667 14.67 1.71 0.00 3.86
2241 2440 5.128205 CCATATCATTTCTGCAGTTCCAGA 58.872 41.667 14.67 7.30 39.94 3.86
2242 2441 5.008415 CCATATCATTTCTGCAGTTCCAGAC 59.992 44.000 14.67 0.00 41.28 3.51
2243 2442 3.777106 TCATTTCTGCAGTTCCAGACT 57.223 42.857 14.67 0.00 41.28 3.24
2250 2449 3.986054 AGTTCCAGACTGCCCACA 58.014 55.556 0.00 0.00 37.17 4.17
2251 2450 2.230664 AGTTCCAGACTGCCCACAA 58.769 52.632 0.00 0.00 37.17 3.33
2252 2451 0.773644 AGTTCCAGACTGCCCACAAT 59.226 50.000 0.00 0.00 37.17 2.71
2253 2452 1.985159 AGTTCCAGACTGCCCACAATA 59.015 47.619 0.00 0.00 37.17 1.90
2254 2453 2.375174 AGTTCCAGACTGCCCACAATAA 59.625 45.455 0.00 0.00 37.17 1.40
2255 2454 3.153919 GTTCCAGACTGCCCACAATAAA 58.846 45.455 0.00 0.00 0.00 1.40
2256 2455 3.071874 TCCAGACTGCCCACAATAAAG 57.928 47.619 0.00 0.00 0.00 1.85
2257 2456 1.474077 CCAGACTGCCCACAATAAAGC 59.526 52.381 0.00 0.00 0.00 3.51
2258 2457 2.161855 CAGACTGCCCACAATAAAGCA 58.838 47.619 0.00 0.00 0.00 3.91
2259 2458 2.557924 CAGACTGCCCACAATAAAGCAA 59.442 45.455 0.00 0.00 34.26 3.91
2260 2459 3.005684 CAGACTGCCCACAATAAAGCAAA 59.994 43.478 0.00 0.00 34.26 3.68
2261 2460 3.256631 AGACTGCCCACAATAAAGCAAAG 59.743 43.478 0.00 0.00 34.26 2.77
2262 2461 3.230134 ACTGCCCACAATAAAGCAAAGA 58.770 40.909 0.00 0.00 34.26 2.52
2263 2462 3.005791 ACTGCCCACAATAAAGCAAAGAC 59.994 43.478 0.00 0.00 34.26 3.01
2264 2463 2.030363 TGCCCACAATAAAGCAAAGACG 60.030 45.455 0.00 0.00 30.97 4.18
2265 2464 2.595386 CCCACAATAAAGCAAAGACGC 58.405 47.619 0.00 0.00 0.00 5.19
2266 2465 2.595386 CCACAATAAAGCAAAGACGCC 58.405 47.619 0.00 0.00 0.00 5.68
2267 2466 2.228822 CCACAATAAAGCAAAGACGCCT 59.771 45.455 0.00 0.00 0.00 5.52
2268 2467 3.438781 CCACAATAAAGCAAAGACGCCTA 59.561 43.478 0.00 0.00 0.00 3.93
2269 2468 4.403453 CACAATAAAGCAAAGACGCCTAC 58.597 43.478 0.00 0.00 0.00 3.18
2270 2469 4.069304 ACAATAAAGCAAAGACGCCTACA 58.931 39.130 0.00 0.00 0.00 2.74
2271 2470 4.083484 ACAATAAAGCAAAGACGCCTACAC 60.083 41.667 0.00 0.00 0.00 2.90
2272 2471 0.865769 AAAGCAAAGACGCCTACACG 59.134 50.000 0.00 0.00 39.50 4.49
2273 2472 0.032952 AAGCAAAGACGCCTACACGA 59.967 50.000 0.00 0.00 36.70 4.35
2274 2473 0.032952 AGCAAAGACGCCTACACGAA 59.967 50.000 0.00 0.00 36.70 3.85
2275 2474 1.076332 GCAAAGACGCCTACACGAAT 58.924 50.000 0.00 0.00 36.70 3.34
2276 2475 1.201921 GCAAAGACGCCTACACGAATG 60.202 52.381 0.00 0.00 36.70 2.67
2277 2476 2.066262 CAAAGACGCCTACACGAATGT 58.934 47.619 0.00 0.00 43.30 2.71
2286 2485 2.780643 CACGAATGTGCCTCGCTG 59.219 61.111 0.00 0.00 39.67 5.18
2287 2486 2.029288 CACGAATGTGCCTCGCTGT 61.029 57.895 0.00 0.00 39.67 4.40
2288 2487 0.735978 CACGAATGTGCCTCGCTGTA 60.736 55.000 0.00 0.00 39.67 2.74
2289 2488 0.175760 ACGAATGTGCCTCGCTGTAT 59.824 50.000 0.00 0.00 39.97 2.29
2290 2489 0.855349 CGAATGTGCCTCGCTGTATC 59.145 55.000 0.00 0.00 0.00 2.24
2291 2490 1.536922 CGAATGTGCCTCGCTGTATCT 60.537 52.381 0.00 0.00 0.00 1.98
2292 2491 2.287608 CGAATGTGCCTCGCTGTATCTA 60.288 50.000 0.00 0.00 0.00 1.98
2293 2492 3.717707 GAATGTGCCTCGCTGTATCTAA 58.282 45.455 0.00 0.00 0.00 2.10
2294 2493 4.310769 GAATGTGCCTCGCTGTATCTAAT 58.689 43.478 0.00 0.00 0.00 1.73
2295 2494 3.371102 TGTGCCTCGCTGTATCTAATC 57.629 47.619 0.00 0.00 0.00 1.75
2296 2495 2.959030 TGTGCCTCGCTGTATCTAATCT 59.041 45.455 0.00 0.00 0.00 2.40
2297 2496 4.142038 TGTGCCTCGCTGTATCTAATCTA 58.858 43.478 0.00 0.00 0.00 1.98
2298 2497 4.767409 TGTGCCTCGCTGTATCTAATCTAT 59.233 41.667 0.00 0.00 0.00 1.98
2299 2498 5.106118 TGTGCCTCGCTGTATCTAATCTATC 60.106 44.000 0.00 0.00 0.00 2.08
2300 2499 4.399618 TGCCTCGCTGTATCTAATCTATCC 59.600 45.833 0.00 0.00 0.00 2.59
2301 2500 4.202070 GCCTCGCTGTATCTAATCTATCCC 60.202 50.000 0.00 0.00 0.00 3.85
2302 2501 4.950475 CCTCGCTGTATCTAATCTATCCCA 59.050 45.833 0.00 0.00 0.00 4.37
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.594602 CCGTGTTCAGTGGAGTACGA 59.405 55.000 9.20 0.00 36.75 3.43
1 2 0.594602 TCCGTGTTCAGTGGAGTACG 59.405 55.000 1.95 1.95 35.37 3.67
2 3 2.349297 CTCCGTGTTCAGTGGAGTAC 57.651 55.000 10.88 0.00 43.48 2.73
6 7 0.320683 CATGCTCCGTGTTCAGTGGA 60.321 55.000 0.00 0.00 0.00 4.02
7 8 1.300971 CCATGCTCCGTGTTCAGTGG 61.301 60.000 0.00 0.00 0.00 4.00
8 9 0.603707 ACCATGCTCCGTGTTCAGTG 60.604 55.000 0.00 0.00 0.00 3.66
9 10 0.108585 AACCATGCTCCGTGTTCAGT 59.891 50.000 0.00 0.00 0.00 3.41
10 11 0.518636 CAACCATGCTCCGTGTTCAG 59.481 55.000 0.00 0.00 0.00 3.02
11 12 0.888736 CCAACCATGCTCCGTGTTCA 60.889 55.000 0.00 0.00 0.00 3.18
12 13 0.889186 ACCAACCATGCTCCGTGTTC 60.889 55.000 0.00 0.00 0.00 3.18
13 14 0.467290 AACCAACCATGCTCCGTGTT 60.467 50.000 0.00 0.00 0.00 3.32
14 15 1.150536 AACCAACCATGCTCCGTGT 59.849 52.632 0.00 0.00 0.00 4.49
15 16 1.580942 CAACCAACCATGCTCCGTG 59.419 57.895 0.00 0.00 0.00 4.94
16 17 2.268076 GCAACCAACCATGCTCCGT 61.268 57.895 0.00 0.00 39.46 4.69
17 18 1.804396 TTGCAACCAACCATGCTCCG 61.804 55.000 0.00 0.00 42.97 4.63
18 19 0.319813 GTTGCAACCAACCATGCTCC 60.320 55.000 19.15 0.00 44.37 4.70
19 20 3.199764 GTTGCAACCAACCATGCTC 57.800 52.632 19.15 0.00 44.37 4.26
27 28 4.800993 CGTTCATTTACAAGTTGCAACCAA 59.199 37.500 25.62 11.98 0.00 3.67
28 29 4.142359 ACGTTCATTTACAAGTTGCAACCA 60.142 37.500 25.62 6.33 0.00 3.67
29 30 4.206200 CACGTTCATTTACAAGTTGCAACC 59.794 41.667 25.62 8.37 0.00 3.77
30 31 4.206200 CCACGTTCATTTACAAGTTGCAAC 59.794 41.667 22.17 22.17 0.00 4.17
31 32 4.355437 CCACGTTCATTTACAAGTTGCAA 58.645 39.130 1.81 0.00 0.00 4.08
32 33 3.243234 CCCACGTTCATTTACAAGTTGCA 60.243 43.478 1.81 0.00 0.00 4.08
33 34 3.243267 ACCCACGTTCATTTACAAGTTGC 60.243 43.478 1.81 0.00 0.00 4.17
34 35 4.274950 AGACCCACGTTCATTTACAAGTTG 59.725 41.667 0.00 0.00 0.00 3.16
35 36 4.457466 AGACCCACGTTCATTTACAAGTT 58.543 39.130 0.00 0.00 0.00 2.66
36 37 4.062991 GAGACCCACGTTCATTTACAAGT 58.937 43.478 0.00 0.00 0.00 3.16
37 38 4.062293 TGAGACCCACGTTCATTTACAAG 58.938 43.478 0.00 0.00 0.00 3.16
38 39 4.062293 CTGAGACCCACGTTCATTTACAA 58.938 43.478 0.00 0.00 0.00 2.41
39 40 3.322541 TCTGAGACCCACGTTCATTTACA 59.677 43.478 0.00 0.00 0.00 2.41
40 41 3.921677 TCTGAGACCCACGTTCATTTAC 58.078 45.455 0.00 0.00 0.00 2.01
41 42 3.576982 ACTCTGAGACCCACGTTCATTTA 59.423 43.478 12.44 0.00 0.00 1.40
42 43 2.368875 ACTCTGAGACCCACGTTCATTT 59.631 45.455 12.44 0.00 0.00 2.32
43 44 1.971357 ACTCTGAGACCCACGTTCATT 59.029 47.619 12.44 0.00 0.00 2.57
44 45 1.633774 ACTCTGAGACCCACGTTCAT 58.366 50.000 12.44 0.00 0.00 2.57
45 46 1.410004 AACTCTGAGACCCACGTTCA 58.590 50.000 12.44 0.00 0.00 3.18
46 47 2.528041 AAACTCTGAGACCCACGTTC 57.472 50.000 12.44 0.00 0.00 3.95
47 48 2.696707 TGTAAACTCTGAGACCCACGTT 59.303 45.455 12.44 0.00 0.00 3.99
48 49 2.035576 GTGTAAACTCTGAGACCCACGT 59.964 50.000 12.44 0.00 0.00 4.49
49 50 2.609737 GGTGTAAACTCTGAGACCCACG 60.610 54.545 12.44 0.00 0.00 4.94
50 51 2.633481 AGGTGTAAACTCTGAGACCCAC 59.367 50.000 12.44 11.29 0.00 4.61
51 52 2.897969 GAGGTGTAAACTCTGAGACCCA 59.102 50.000 12.44 0.00 32.28 4.51
52 53 2.094649 CGAGGTGTAAACTCTGAGACCC 60.095 54.545 12.44 3.54 32.83 4.46
53 54 2.818432 TCGAGGTGTAAACTCTGAGACC 59.182 50.000 12.44 7.99 32.83 3.85
54 55 4.500603 TTCGAGGTGTAAACTCTGAGAC 57.499 45.455 12.44 0.00 32.83 3.36
55 56 4.340097 TGTTTCGAGGTGTAAACTCTGAGA 59.660 41.667 12.44 0.00 36.70 3.27
56 57 4.617959 TGTTTCGAGGTGTAAACTCTGAG 58.382 43.478 2.45 2.45 36.70 3.35
57 58 4.659111 TGTTTCGAGGTGTAAACTCTGA 57.341 40.909 0.00 0.00 36.70 3.27
58 59 4.809426 AGTTGTTTCGAGGTGTAAACTCTG 59.191 41.667 0.00 0.00 36.70 3.35
59 60 5.019785 AGTTGTTTCGAGGTGTAAACTCT 57.980 39.130 0.00 0.00 36.70 3.24
60 61 5.729974 AAGTTGTTTCGAGGTGTAAACTC 57.270 39.130 0.00 0.00 36.70 3.01
61 62 6.505044 AAAAGTTGTTTCGAGGTGTAAACT 57.495 33.333 0.00 0.00 36.70 2.66
86 87 3.532896 TTGCAACCAACCGCAAAAA 57.467 42.105 0.00 0.00 44.71 1.94
95 96 4.800993 CGTTCATTTACAAGTTGCAACCAA 59.199 37.500 25.62 11.98 0.00 3.67
96 97 4.142359 ACGTTCATTTACAAGTTGCAACCA 60.142 37.500 25.62 6.33 0.00 3.67
97 98 4.206200 CACGTTCATTTACAAGTTGCAACC 59.794 41.667 25.62 8.37 0.00 3.77
98 99 4.206200 CCACGTTCATTTACAAGTTGCAAC 59.794 41.667 22.17 22.17 0.00 4.17
99 100 4.355437 CCACGTTCATTTACAAGTTGCAA 58.645 39.130 1.81 0.00 0.00 4.08
100 101 3.243234 CCCACGTTCATTTACAAGTTGCA 60.243 43.478 1.81 0.00 0.00 4.08
101 102 3.243267 ACCCACGTTCATTTACAAGTTGC 60.243 43.478 1.81 0.00 0.00 4.17
102 103 4.533222 GACCCACGTTCATTTACAAGTTG 58.467 43.478 0.00 0.00 0.00 3.16
103 104 3.249080 CGACCCACGTTCATTTACAAGTT 59.751 43.478 0.00 0.00 37.22 2.66
104 105 2.803956 CGACCCACGTTCATTTACAAGT 59.196 45.455 0.00 0.00 37.22 3.16
105 106 3.061322 TCGACCCACGTTCATTTACAAG 58.939 45.455 0.00 0.00 43.13 3.16
106 107 3.109044 TCGACCCACGTTCATTTACAA 57.891 42.857 0.00 0.00 43.13 2.41
107 108 2.816204 TCGACCCACGTTCATTTACA 57.184 45.000 0.00 0.00 43.13 2.41
108 109 3.248125 TGTTTCGACCCACGTTCATTTAC 59.752 43.478 0.00 0.00 43.13 2.01
109 110 3.464907 TGTTTCGACCCACGTTCATTTA 58.535 40.909 0.00 0.00 43.13 1.40
110 111 2.290464 TGTTTCGACCCACGTTCATTT 58.710 42.857 0.00 0.00 43.13 2.32
111 112 1.956297 TGTTTCGACCCACGTTCATT 58.044 45.000 0.00 0.00 43.13 2.57
112 113 1.600485 GTTGTTTCGACCCACGTTCAT 59.400 47.619 0.00 0.00 43.13 2.57
113 114 1.008329 GTTGTTTCGACCCACGTTCA 58.992 50.000 0.00 0.00 43.13 3.18
114 115 1.292992 AGTTGTTTCGACCCACGTTC 58.707 50.000 0.00 0.00 43.13 3.95
115 116 2.600470 TAGTTGTTTCGACCCACGTT 57.400 45.000 0.00 0.00 43.13 3.99
116 117 2.159057 AGTTAGTTGTTTCGACCCACGT 60.159 45.455 0.00 0.00 43.13 4.49
117 118 2.476821 AGTTAGTTGTTTCGACCCACG 58.523 47.619 0.00 0.00 44.09 4.94
118 119 4.025145 CAGAAGTTAGTTGTTTCGACCCAC 60.025 45.833 0.00 0.00 0.00 4.61
119 120 4.124238 CAGAAGTTAGTTGTTTCGACCCA 58.876 43.478 0.00 0.00 0.00 4.51
120 121 4.374399 TCAGAAGTTAGTTGTTTCGACCC 58.626 43.478 0.00 0.00 0.00 4.46
121 122 5.978934 TTCAGAAGTTAGTTGTTTCGACC 57.021 39.130 0.00 0.00 0.00 4.79
122 123 7.794349 CAGAATTCAGAAGTTAGTTGTTTCGAC 59.206 37.037 8.44 0.00 0.00 4.20
123 124 7.709182 TCAGAATTCAGAAGTTAGTTGTTTCGA 59.291 33.333 8.44 0.00 0.00 3.71
124 125 7.851508 TCAGAATTCAGAAGTTAGTTGTTTCG 58.148 34.615 8.44 0.00 0.00 3.46
125 126 9.439537 GTTCAGAATTCAGAAGTTAGTTGTTTC 57.560 33.333 13.03 0.00 0.00 2.78
126 127 8.956426 TGTTCAGAATTCAGAAGTTAGTTGTTT 58.044 29.630 13.03 0.00 0.00 2.83
127 128 8.506168 TGTTCAGAATTCAGAAGTTAGTTGTT 57.494 30.769 13.03 0.00 0.00 2.83
128 129 8.682936 ATGTTCAGAATTCAGAAGTTAGTTGT 57.317 30.769 13.03 0.00 0.00 3.32
129 130 9.390795 CAATGTTCAGAATTCAGAAGTTAGTTG 57.609 33.333 13.03 9.87 0.00 3.16
130 131 8.078596 GCAATGTTCAGAATTCAGAAGTTAGTT 58.921 33.333 13.03 2.87 0.00 2.24
131 132 7.229306 TGCAATGTTCAGAATTCAGAAGTTAGT 59.771 33.333 13.03 1.16 0.00 2.24
132 133 7.587629 TGCAATGTTCAGAATTCAGAAGTTAG 58.412 34.615 13.03 6.21 0.00 2.34
133 134 7.509141 TGCAATGTTCAGAATTCAGAAGTTA 57.491 32.000 13.03 4.51 0.00 2.24
134 135 6.395426 TGCAATGTTCAGAATTCAGAAGTT 57.605 33.333 13.03 8.84 0.00 2.66
135 136 6.395426 TTGCAATGTTCAGAATTCAGAAGT 57.605 33.333 13.03 3.57 0.00 3.01
136 137 7.568861 GCTTTTGCAATGTTCAGAATTCAGAAG 60.569 37.037 13.03 3.85 46.58 2.85
137 138 6.201425 GCTTTTGCAATGTTCAGAATTCAGAA 59.799 34.615 9.04 9.04 46.58 3.02
138 139 5.693104 GCTTTTGCAATGTTCAGAATTCAGA 59.307 36.000 8.44 1.71 46.58 3.27
139 140 5.912528 GCTTTTGCAATGTTCAGAATTCAG 58.087 37.500 8.44 0.00 46.58 3.02
140 141 5.910637 GCTTTTGCAATGTTCAGAATTCA 57.089 34.783 8.44 0.00 46.58 2.57
190 194 3.145286 AGCCTTTTCAGCTCTCTGTTTC 58.855 45.455 0.00 0.00 41.10 2.78
209 213 0.868406 CCTGTTGGTCAACTCGAAGC 59.132 55.000 13.96 0.00 41.67 3.86
315 319 3.190535 CGGTTCAACCTTAGATTGTTGGG 59.809 47.826 4.68 0.00 41.64 4.12
320 324 1.743394 GGCCGGTTCAACCTTAGATTG 59.257 52.381 4.68 0.00 35.66 2.67
337 342 0.596859 GTAGATCGTAACGGCTGGCC 60.597 60.000 0.00 0.00 0.00 5.36
346 351 3.430333 TCGCATTGCAGTAGATCGTAA 57.570 42.857 9.69 0.00 0.00 3.18
347 352 3.643159 ATCGCATTGCAGTAGATCGTA 57.357 42.857 9.69 0.00 0.00 3.43
348 353 2.515926 ATCGCATTGCAGTAGATCGT 57.484 45.000 9.69 0.00 0.00 3.73
349 354 2.096565 CCAATCGCATTGCAGTAGATCG 60.097 50.000 9.69 0.00 38.92 3.69
350 355 2.350197 GCCAATCGCATTGCAGTAGATC 60.350 50.000 9.69 0.00 38.92 2.75
351 356 1.605710 GCCAATCGCATTGCAGTAGAT 59.394 47.619 9.69 0.23 38.92 1.98
352 357 1.016627 GCCAATCGCATTGCAGTAGA 58.983 50.000 9.69 0.00 38.92 2.59
353 358 0.316442 CGCCAATCGCATTGCAGTAG 60.316 55.000 9.69 0.00 38.92 2.57
354 359 1.024046 ACGCCAATCGCATTGCAGTA 61.024 50.000 9.69 0.00 43.23 2.74
355 360 1.865788 AACGCCAATCGCATTGCAGT 61.866 50.000 9.69 0.00 43.23 4.40
356 361 1.135699 GAACGCCAATCGCATTGCAG 61.136 55.000 9.69 1.90 43.23 4.41
357 362 1.154054 GAACGCCAATCGCATTGCA 60.154 52.632 9.69 0.00 43.23 4.08
358 363 0.456653 AAGAACGCCAATCGCATTGC 60.457 50.000 0.00 0.00 43.23 3.56
359 364 1.261989 CAAGAACGCCAATCGCATTG 58.738 50.000 2.89 2.89 43.23 2.82
360 365 0.456653 GCAAGAACGCCAATCGCATT 60.457 50.000 0.00 0.00 43.23 3.56
361 366 1.137404 GCAAGAACGCCAATCGCAT 59.863 52.632 0.00 0.00 43.23 4.73
362 367 2.257302 TGCAAGAACGCCAATCGCA 61.257 52.632 0.00 0.00 43.23 5.10
363 368 1.797537 GTGCAAGAACGCCAATCGC 60.798 57.895 0.00 0.00 43.23 4.58
364 369 0.453282 CAGTGCAAGAACGCCAATCG 60.453 55.000 0.00 0.00 45.38 3.34
365 370 0.730494 GCAGTGCAAGAACGCCAATC 60.730 55.000 11.09 0.00 0.00 2.67
404 419 0.890542 TGCGGTTGCTTTCATCAGCT 60.891 50.000 0.00 0.00 43.34 4.24
426 444 2.360852 CAGCTGGCCCTTGTCCTG 60.361 66.667 5.57 0.00 0.00 3.86
824 874 3.649277 ATCGCTCTCACGCCACCAC 62.649 63.158 0.00 0.00 0.00 4.16
825 875 3.381983 ATCGCTCTCACGCCACCA 61.382 61.111 0.00 0.00 0.00 4.17
826 876 2.887568 CATCGCTCTCACGCCACC 60.888 66.667 0.00 0.00 0.00 4.61
855 905 2.224018 TGTCAAATTGCTGTTCCAAGGC 60.224 45.455 0.00 0.00 0.00 4.35
856 906 3.553508 CCTGTCAAATTGCTGTTCCAAGG 60.554 47.826 0.00 0.00 0.00 3.61
857 907 3.553508 CCCTGTCAAATTGCTGTTCCAAG 60.554 47.826 0.00 0.00 0.00 3.61
860 910 1.963515 ACCCTGTCAAATTGCTGTTCC 59.036 47.619 0.00 0.00 0.00 3.62
879 929 2.158971 GGCAGAGGAGAGGATCAGAAAC 60.159 54.545 0.00 0.00 37.82 2.78
882 932 0.932955 AGGCAGAGGAGAGGATCAGA 59.067 55.000 0.00 0.00 37.82 3.27
883 933 2.673775 TAGGCAGAGGAGAGGATCAG 57.326 55.000 0.00 0.00 37.82 2.90
888 938 4.381079 GCGTATTTATAGGCAGAGGAGAGG 60.381 50.000 8.99 0.00 42.10 3.69
889 939 4.461081 AGCGTATTTATAGGCAGAGGAGAG 59.539 45.833 14.62 0.00 44.22 3.20
890 940 4.408276 AGCGTATTTATAGGCAGAGGAGA 58.592 43.478 14.62 0.00 44.22 3.71
892 942 3.510360 GGAGCGTATTTATAGGCAGAGGA 59.490 47.826 14.62 0.00 44.22 3.71
893 943 3.258372 TGGAGCGTATTTATAGGCAGAGG 59.742 47.826 14.62 0.00 44.22 3.69
894 944 4.521130 TGGAGCGTATTTATAGGCAGAG 57.479 45.455 14.62 0.00 44.22 3.35
895 945 4.262463 CCTTGGAGCGTATTTATAGGCAGA 60.262 45.833 14.62 0.00 44.22 4.26
949 1030 4.174009 CTGGTCGATCGAGTTTATGTGTT 58.826 43.478 20.09 0.00 0.00 3.32
1036 1144 2.587194 CGCCGCCAAGATCAGGAG 60.587 66.667 8.29 4.88 0.00 3.69
1152 1263 2.804090 GACGACGCTGTTCCGACC 60.804 66.667 0.00 0.00 0.00 4.79
1337 1454 8.771920 TCACGAATCATGAAACTAAATACAGT 57.228 30.769 0.00 0.00 0.00 3.55
1338 1455 9.087424 TCTCACGAATCATGAAACTAAATACAG 57.913 33.333 0.00 0.00 0.00 2.74
1339 1456 8.996024 TCTCACGAATCATGAAACTAAATACA 57.004 30.769 0.00 0.00 0.00 2.29
1388 1511 0.234884 GCGTTACAAGCTCCACACAC 59.765 55.000 0.00 0.00 0.00 3.82
1389 1512 1.218875 CGCGTTACAAGCTCCACACA 61.219 55.000 0.00 0.00 0.00 3.72
1390 1513 0.942410 TCGCGTTACAAGCTCCACAC 60.942 55.000 5.77 0.00 0.00 3.82
1416 1544 5.235616 TCAACCTTGTAATCAGAACAACGAC 59.764 40.000 0.00 0.00 33.45 4.34
1510 1656 4.455533 TCTTGCTCACAATTAAGCGTTGAT 59.544 37.500 0.00 0.00 41.51 2.57
1511 1657 3.812609 TCTTGCTCACAATTAAGCGTTGA 59.187 39.130 0.00 0.00 41.51 3.18
1512 1658 3.908382 GTCTTGCTCACAATTAAGCGTTG 59.092 43.478 3.17 0.00 41.51 4.10
1521 1667 2.433868 ACGTACGTCTTGCTCACAAT 57.566 45.000 16.72 0.00 34.61 2.71
1645 1826 0.955428 ACCAGAAACGCATGCATCGT 60.955 50.000 19.57 15.41 42.54 3.73
1686 1868 0.873312 CTGATCTGATGGTGCCGTCG 60.873 60.000 0.00 2.01 34.87 5.12
1720 1908 0.901580 TGTACGTGGAGGGACCCTTC 60.902 60.000 16.22 14.37 38.00 3.46
1849 2048 0.790814 CTGGGACGAACTCGCTTTTC 59.209 55.000 0.00 0.00 44.43 2.29
1850 2049 1.228657 GCTGGGACGAACTCGCTTTT 61.229 55.000 0.00 0.00 44.43 2.27
1851 2050 1.668151 GCTGGGACGAACTCGCTTT 60.668 57.895 0.00 0.00 44.43 3.51
1852 2051 2.048127 GCTGGGACGAACTCGCTT 60.048 61.111 0.00 0.00 44.43 4.68
1853 2052 4.070552 GGCTGGGACGAACTCGCT 62.071 66.667 0.00 0.00 44.43 4.93
1854 2053 3.991536 GAGGCTGGGACGAACTCGC 62.992 68.421 0.00 0.00 44.43 5.03
1855 2054 2.182030 GAGGCTGGGACGAACTCG 59.818 66.667 0.00 0.00 46.33 4.18
1856 2055 1.216710 CAGAGGCTGGGACGAACTC 59.783 63.158 0.00 0.00 0.00 3.01
1857 2056 2.948720 GCAGAGGCTGGGACGAACT 61.949 63.158 0.00 0.00 36.96 3.01
1858 2057 2.435059 GCAGAGGCTGGGACGAAC 60.435 66.667 0.00 0.00 36.96 3.95
1859 2058 1.841302 AATGCAGAGGCTGGGACGAA 61.841 55.000 0.00 0.00 41.91 3.85
1860 2059 0.975556 TAATGCAGAGGCTGGGACGA 60.976 55.000 0.00 0.00 41.91 4.20
1861 2060 0.107703 TTAATGCAGAGGCTGGGACG 60.108 55.000 0.00 0.00 41.91 4.79
1862 2061 2.128771 TTTAATGCAGAGGCTGGGAC 57.871 50.000 0.00 0.00 41.91 4.46
1863 2062 2.897271 TTTTAATGCAGAGGCTGGGA 57.103 45.000 0.00 0.00 41.91 4.37
1864 2063 3.091545 TCTTTTTAATGCAGAGGCTGGG 58.908 45.455 0.00 0.00 41.91 4.45
1865 2064 4.679662 CATCTTTTTAATGCAGAGGCTGG 58.320 43.478 0.00 0.00 41.91 4.85
1866 2065 4.110482 GCATCTTTTTAATGCAGAGGCTG 58.890 43.478 0.00 0.00 46.93 4.85
1867 2066 4.382345 GCATCTTTTTAATGCAGAGGCT 57.618 40.909 3.35 0.00 46.93 4.58
1908 2107 8.797438 GGAGACTCTTGTTGGATCTTTTATTTT 58.203 33.333 1.74 0.00 0.00 1.82
1909 2108 7.944554 TGGAGACTCTTGTTGGATCTTTTATTT 59.055 33.333 1.74 0.00 0.00 1.40
1910 2109 7.461749 TGGAGACTCTTGTTGGATCTTTTATT 58.538 34.615 1.74 0.00 0.00 1.40
1911 2110 7.020827 TGGAGACTCTTGTTGGATCTTTTAT 57.979 36.000 1.74 0.00 0.00 1.40
1912 2111 6.433847 TGGAGACTCTTGTTGGATCTTTTA 57.566 37.500 1.74 0.00 0.00 1.52
1913 2112 5.310409 TGGAGACTCTTGTTGGATCTTTT 57.690 39.130 1.74 0.00 0.00 2.27
1914 2113 4.982241 TGGAGACTCTTGTTGGATCTTT 57.018 40.909 1.74 0.00 0.00 2.52
1915 2114 4.349342 ACTTGGAGACTCTTGTTGGATCTT 59.651 41.667 1.74 0.00 0.00 2.40
1916 2115 3.906846 ACTTGGAGACTCTTGTTGGATCT 59.093 43.478 1.74 0.00 0.00 2.75
1917 2116 4.020662 AGACTTGGAGACTCTTGTTGGATC 60.021 45.833 1.74 0.00 0.00 3.36
1918 2117 3.906846 AGACTTGGAGACTCTTGTTGGAT 59.093 43.478 1.74 0.00 0.00 3.41
1919 2118 3.309296 AGACTTGGAGACTCTTGTTGGA 58.691 45.455 1.74 0.00 0.00 3.53
1920 2119 3.070159 TGAGACTTGGAGACTCTTGTTGG 59.930 47.826 1.74 0.00 37.78 3.77
1921 2120 4.054671 GTGAGACTTGGAGACTCTTGTTG 58.945 47.826 1.74 0.00 37.78 3.33
1922 2121 3.706594 TGTGAGACTTGGAGACTCTTGTT 59.293 43.478 1.74 0.00 37.78 2.83
1923 2122 3.068873 GTGTGAGACTTGGAGACTCTTGT 59.931 47.826 1.74 0.00 37.78 3.16
1924 2123 3.068732 TGTGTGAGACTTGGAGACTCTTG 59.931 47.826 1.74 0.00 37.78 3.02
1925 2124 3.068873 GTGTGTGAGACTTGGAGACTCTT 59.931 47.826 1.74 0.00 37.78 2.85
1926 2125 2.625790 GTGTGTGAGACTTGGAGACTCT 59.374 50.000 1.74 0.00 37.78 3.24
1927 2126 2.362397 TGTGTGTGAGACTTGGAGACTC 59.638 50.000 0.00 0.00 37.50 3.36
1928 2127 2.363680 CTGTGTGTGAGACTTGGAGACT 59.636 50.000 0.00 0.00 0.00 3.24
1929 2128 2.101582 ACTGTGTGTGAGACTTGGAGAC 59.898 50.000 0.00 0.00 0.00 3.36
1930 2129 2.388735 ACTGTGTGTGAGACTTGGAGA 58.611 47.619 0.00 0.00 0.00 3.71
1931 2130 2.898729 ACTGTGTGTGAGACTTGGAG 57.101 50.000 0.00 0.00 0.00 3.86
1932 2131 3.296854 ACTACTGTGTGTGAGACTTGGA 58.703 45.455 0.00 0.00 0.00 3.53
1933 2132 3.735237 ACTACTGTGTGTGAGACTTGG 57.265 47.619 0.00 0.00 0.00 3.61
1934 2133 6.040247 TGTTTACTACTGTGTGTGAGACTTG 58.960 40.000 0.00 0.00 0.00 3.16
1935 2134 6.216801 TGTTTACTACTGTGTGTGAGACTT 57.783 37.500 0.00 0.00 0.00 3.01
1936 2135 5.847111 TGTTTACTACTGTGTGTGAGACT 57.153 39.130 0.00 0.00 0.00 3.24
1937 2136 6.897259 TTTGTTTACTACTGTGTGTGAGAC 57.103 37.500 0.00 0.00 0.00 3.36
1938 2137 6.018262 GCATTTGTTTACTACTGTGTGTGAGA 60.018 38.462 0.00 0.00 0.00 3.27
1939 2138 6.017934 AGCATTTGTTTACTACTGTGTGTGAG 60.018 38.462 0.00 0.00 0.00 3.51
1940 2139 5.820423 AGCATTTGTTTACTACTGTGTGTGA 59.180 36.000 0.00 0.00 0.00 3.58
1941 2140 6.060028 AGCATTTGTTTACTACTGTGTGTG 57.940 37.500 0.00 0.00 0.00 3.82
1942 2141 5.820423 TGAGCATTTGTTTACTACTGTGTGT 59.180 36.000 0.00 0.00 0.00 3.72
1943 2142 6.136071 GTGAGCATTTGTTTACTACTGTGTG 58.864 40.000 0.00 0.00 0.00 3.82
1944 2143 5.050363 CGTGAGCATTTGTTTACTACTGTGT 60.050 40.000 0.00 0.00 0.00 3.72
1945 2144 5.176774 TCGTGAGCATTTGTTTACTACTGTG 59.823 40.000 0.00 0.00 0.00 3.66
1946 2145 5.294356 TCGTGAGCATTTGTTTACTACTGT 58.706 37.500 0.00 0.00 0.00 3.55
1947 2146 5.839262 TCGTGAGCATTTGTTTACTACTG 57.161 39.130 0.00 0.00 0.00 2.74
1948 2147 6.220930 TCTTCGTGAGCATTTGTTTACTACT 58.779 36.000 0.00 0.00 0.00 2.57
1949 2148 6.462073 TCTTCGTGAGCATTTGTTTACTAC 57.538 37.500 0.00 0.00 0.00 2.73
1950 2149 6.706055 CTCTTCGTGAGCATTTGTTTACTA 57.294 37.500 0.00 0.00 35.84 1.82
1951 2150 5.597813 CTCTTCGTGAGCATTTGTTTACT 57.402 39.130 0.00 0.00 35.84 2.24
1963 2162 4.472691 TTCATGTTTTGCTCTTCGTGAG 57.527 40.909 0.00 4.32 45.33 3.51
1964 2163 4.891627 TTTCATGTTTTGCTCTTCGTGA 57.108 36.364 0.00 0.00 0.00 4.35
1965 2164 4.085415 GCTTTTCATGTTTTGCTCTTCGTG 60.085 41.667 0.00 0.00 0.00 4.35
1966 2165 4.044426 GCTTTTCATGTTTTGCTCTTCGT 58.956 39.130 0.00 0.00 0.00 3.85
1967 2166 4.043750 TGCTTTTCATGTTTTGCTCTTCG 58.956 39.130 0.00 0.00 0.00 3.79
1968 2167 5.971895 TTGCTTTTCATGTTTTGCTCTTC 57.028 34.783 0.00 0.00 0.00 2.87
1969 2168 5.220719 GCTTTGCTTTTCATGTTTTGCTCTT 60.221 36.000 0.00 0.00 0.00 2.85
1970 2169 4.271776 GCTTTGCTTTTCATGTTTTGCTCT 59.728 37.500 0.00 0.00 0.00 4.09
1971 2170 4.521010 GCTTTGCTTTTCATGTTTTGCTC 58.479 39.130 0.00 0.00 0.00 4.26
1972 2171 3.313249 GGCTTTGCTTTTCATGTTTTGCT 59.687 39.130 0.00 0.00 0.00 3.91
1973 2172 3.065095 TGGCTTTGCTTTTCATGTTTTGC 59.935 39.130 0.00 0.00 0.00 3.68
1974 2173 4.094590 TGTGGCTTTGCTTTTCATGTTTTG 59.905 37.500 0.00 0.00 0.00 2.44
1975 2174 4.260170 TGTGGCTTTGCTTTTCATGTTTT 58.740 34.783 0.00 0.00 0.00 2.43
1976 2175 3.871485 TGTGGCTTTGCTTTTCATGTTT 58.129 36.364 0.00 0.00 0.00 2.83
1977 2176 3.540314 TGTGGCTTTGCTTTTCATGTT 57.460 38.095 0.00 0.00 0.00 2.71
1978 2177 3.197265 GTTGTGGCTTTGCTTTTCATGT 58.803 40.909 0.00 0.00 0.00 3.21
1979 2178 2.545106 GGTTGTGGCTTTGCTTTTCATG 59.455 45.455 0.00 0.00 0.00 3.07
1980 2179 2.802774 CGGTTGTGGCTTTGCTTTTCAT 60.803 45.455 0.00 0.00 0.00 2.57
1981 2180 1.470632 CGGTTGTGGCTTTGCTTTTCA 60.471 47.619 0.00 0.00 0.00 2.69
1982 2181 1.208259 CGGTTGTGGCTTTGCTTTTC 58.792 50.000 0.00 0.00 0.00 2.29
1983 2182 0.179086 CCGGTTGTGGCTTTGCTTTT 60.179 50.000 0.00 0.00 0.00 2.27
1984 2183 1.441311 CCGGTTGTGGCTTTGCTTT 59.559 52.632 0.00 0.00 0.00 3.51
1985 2184 3.128375 CCGGTTGTGGCTTTGCTT 58.872 55.556 0.00 0.00 0.00 3.91
1993 2192 1.247419 TTTATGCCAGCCGGTTGTGG 61.247 55.000 17.69 15.43 36.85 4.17
1994 2193 0.600557 TTTTATGCCAGCCGGTTGTG 59.399 50.000 17.69 9.73 33.28 3.33
1995 2194 1.333177 TTTTTATGCCAGCCGGTTGT 58.667 45.000 17.69 1.06 33.28 3.32
2022 2221 7.761704 GTCATGTAATAGGATAGGCATGTAGTG 59.238 40.741 0.00 0.00 36.21 2.74
2023 2222 7.093289 GGTCATGTAATAGGATAGGCATGTAGT 60.093 40.741 0.00 0.00 36.21 2.73
2024 2223 7.268586 GGTCATGTAATAGGATAGGCATGTAG 58.731 42.308 0.00 0.00 36.21 2.74
2025 2224 6.127451 CGGTCATGTAATAGGATAGGCATGTA 60.127 42.308 0.00 0.00 36.21 2.29
2026 2225 5.337571 CGGTCATGTAATAGGATAGGCATGT 60.338 44.000 0.00 0.00 36.21 3.21
2027 2226 5.111989 CGGTCATGTAATAGGATAGGCATG 58.888 45.833 0.00 0.00 36.14 4.06
2028 2227 4.383118 GCGGTCATGTAATAGGATAGGCAT 60.383 45.833 0.00 0.00 0.00 4.40
2029 2228 3.056107 GCGGTCATGTAATAGGATAGGCA 60.056 47.826 0.00 0.00 0.00 4.75
2030 2229 3.522553 GCGGTCATGTAATAGGATAGGC 58.477 50.000 0.00 0.00 0.00 3.93
2031 2230 3.513912 TGGCGGTCATGTAATAGGATAGG 59.486 47.826 0.00 0.00 0.00 2.57
2032 2231 4.801330 TGGCGGTCATGTAATAGGATAG 57.199 45.455 0.00 0.00 0.00 2.08
2033 2232 4.161565 GGATGGCGGTCATGTAATAGGATA 59.838 45.833 0.00 0.00 35.97 2.59
2034 2233 3.055094 GGATGGCGGTCATGTAATAGGAT 60.055 47.826 0.00 0.00 35.97 3.24
2035 2234 2.301870 GGATGGCGGTCATGTAATAGGA 59.698 50.000 0.00 0.00 35.97 2.94
2036 2235 2.038426 TGGATGGCGGTCATGTAATAGG 59.962 50.000 0.00 0.00 35.97 2.57
2037 2236 3.401033 TGGATGGCGGTCATGTAATAG 57.599 47.619 0.00 0.00 35.97 1.73
2038 2237 3.847671 TTGGATGGCGGTCATGTAATA 57.152 42.857 0.00 0.00 35.97 0.98
2039 2238 2.687935 GTTTGGATGGCGGTCATGTAAT 59.312 45.455 0.00 0.00 35.97 1.89
2040 2239 2.088423 GTTTGGATGGCGGTCATGTAA 58.912 47.619 0.00 0.00 35.97 2.41
2041 2240 1.680555 GGTTTGGATGGCGGTCATGTA 60.681 52.381 0.00 0.00 35.97 2.29
2042 2241 0.965363 GGTTTGGATGGCGGTCATGT 60.965 55.000 0.00 0.00 35.97 3.21
2043 2242 0.680921 AGGTTTGGATGGCGGTCATG 60.681 55.000 0.00 0.00 35.97 3.07
2044 2243 0.680921 CAGGTTTGGATGGCGGTCAT 60.681 55.000 0.00 0.00 39.13 3.06
2045 2244 1.303236 CAGGTTTGGATGGCGGTCA 60.303 57.895 0.00 0.00 0.00 4.02
2046 2245 0.893727 AACAGGTTTGGATGGCGGTC 60.894 55.000 0.00 0.00 0.00 4.79
2047 2246 1.152830 AACAGGTTTGGATGGCGGT 59.847 52.632 0.00 0.00 0.00 5.68
2048 2247 0.893270 TCAACAGGTTTGGATGGCGG 60.893 55.000 0.00 0.00 0.00 6.13
2049 2248 0.958091 TTCAACAGGTTTGGATGGCG 59.042 50.000 0.00 0.00 0.00 5.69
2050 2249 3.467374 TTTTCAACAGGTTTGGATGGC 57.533 42.857 0.00 0.00 0.00 4.40
2051 2250 6.340522 GGATATTTTCAACAGGTTTGGATGG 58.659 40.000 0.00 0.00 0.00 3.51
2052 2251 6.340522 GGGATATTTTCAACAGGTTTGGATG 58.659 40.000 0.00 0.00 0.00 3.51
2053 2252 5.127031 CGGGATATTTTCAACAGGTTTGGAT 59.873 40.000 0.00 0.00 0.00 3.41
2054 2253 4.461081 CGGGATATTTTCAACAGGTTTGGA 59.539 41.667 0.00 0.00 0.00 3.53
2055 2254 4.219725 ACGGGATATTTTCAACAGGTTTGG 59.780 41.667 0.00 0.00 0.00 3.28
2056 2255 5.160641 CACGGGATATTTTCAACAGGTTTG 58.839 41.667 0.00 0.00 0.00 2.93
2057 2256 4.321675 GCACGGGATATTTTCAACAGGTTT 60.322 41.667 0.00 0.00 0.00 3.27
2058 2257 3.192633 GCACGGGATATTTTCAACAGGTT 59.807 43.478 0.00 0.00 0.00 3.50
2059 2258 2.752903 GCACGGGATATTTTCAACAGGT 59.247 45.455 0.00 0.00 0.00 4.00
2060 2259 3.016736 AGCACGGGATATTTTCAACAGG 58.983 45.455 0.00 0.00 0.00 4.00
2061 2260 4.035208 GGTAGCACGGGATATTTTCAACAG 59.965 45.833 0.00 0.00 0.00 3.16
2062 2261 3.942748 GGTAGCACGGGATATTTTCAACA 59.057 43.478 0.00 0.00 0.00 3.33
2063 2262 3.942748 TGGTAGCACGGGATATTTTCAAC 59.057 43.478 0.00 0.00 0.00 3.18
2064 2263 4.223556 TGGTAGCACGGGATATTTTCAA 57.776 40.909 0.00 0.00 0.00 2.69
2065 2264 3.916359 TGGTAGCACGGGATATTTTCA 57.084 42.857 0.00 0.00 0.00 2.69
2066 2265 4.642429 AGATGGTAGCACGGGATATTTTC 58.358 43.478 0.00 0.00 0.00 2.29
2067 2266 4.505039 GGAGATGGTAGCACGGGATATTTT 60.505 45.833 0.00 0.00 0.00 1.82
2068 2267 3.008049 GGAGATGGTAGCACGGGATATTT 59.992 47.826 0.00 0.00 0.00 1.40
2069 2268 2.567615 GGAGATGGTAGCACGGGATATT 59.432 50.000 0.00 0.00 0.00 1.28
2070 2269 2.180276 GGAGATGGTAGCACGGGATAT 58.820 52.381 0.00 0.00 0.00 1.63
2071 2270 1.629043 GGAGATGGTAGCACGGGATA 58.371 55.000 0.00 0.00 0.00 2.59
2072 2271 1.122019 GGGAGATGGTAGCACGGGAT 61.122 60.000 0.00 0.00 0.00 3.85
2073 2272 1.760875 GGGAGATGGTAGCACGGGA 60.761 63.158 0.00 0.00 0.00 5.14
2074 2273 1.410850 ATGGGAGATGGTAGCACGGG 61.411 60.000 0.00 0.00 0.00 5.28
2075 2274 0.034059 GATGGGAGATGGTAGCACGG 59.966 60.000 0.00 0.00 0.00 4.94
2076 2275 0.319040 CGATGGGAGATGGTAGCACG 60.319 60.000 0.00 0.00 0.00 5.34
2077 2276 0.034059 CCGATGGGAGATGGTAGCAC 59.966 60.000 0.00 0.00 34.06 4.40
2078 2277 2.440946 CCGATGGGAGATGGTAGCA 58.559 57.895 0.00 0.00 34.06 3.49
2079 2278 3.727455 CTACCCGATGGGAGATGGTAGC 61.727 59.091 9.30 0.00 46.90 3.58
2080 2279 2.171840 CTACCCGATGGGAGATGGTAG 58.828 57.143 9.30 0.00 46.90 3.18
2081 2280 2.304221 CTACCCGATGGGAGATGGTA 57.696 55.000 9.30 0.00 46.90 3.25
2082 2281 3.149436 CTACCCGATGGGAGATGGT 57.851 57.895 9.30 0.00 46.90 3.55
2090 2289 0.742505 TTACTGCGTCTACCCGATGG 59.257 55.000 0.00 0.00 37.80 3.51
2091 2290 1.535437 GGTTACTGCGTCTACCCGATG 60.535 57.143 0.00 0.00 0.00 3.84
2092 2291 0.743097 GGTTACTGCGTCTACCCGAT 59.257 55.000 0.00 0.00 0.00 4.18
2093 2292 0.608856 TGGTTACTGCGTCTACCCGA 60.609 55.000 0.00 0.00 0.00 5.14
2094 2293 0.244450 TTGGTTACTGCGTCTACCCG 59.756 55.000 0.00 0.00 0.00 5.28
2095 2294 2.071540 GTTTGGTTACTGCGTCTACCC 58.928 52.381 0.00 0.00 0.00 3.69
2096 2295 1.723003 CGTTTGGTTACTGCGTCTACC 59.277 52.381 0.00 0.00 0.00 3.18
2097 2296 1.125566 GCGTTTGGTTACTGCGTCTAC 59.874 52.381 0.00 0.00 0.00 2.59
2098 2297 1.000060 AGCGTTTGGTTACTGCGTCTA 60.000 47.619 0.00 0.00 0.00 2.59
2099 2298 0.249741 AGCGTTTGGTTACTGCGTCT 60.250 50.000 0.00 0.00 0.00 4.18
2100 2299 0.163146 GAGCGTTTGGTTACTGCGTC 59.837 55.000 0.00 0.00 0.00 5.19
2101 2300 1.226030 GGAGCGTTTGGTTACTGCGT 61.226 55.000 0.00 0.00 0.00 5.24
2102 2301 1.495951 GGAGCGTTTGGTTACTGCG 59.504 57.895 0.00 0.00 0.00 5.18
2103 2302 0.605589 AGGGAGCGTTTGGTTACTGC 60.606 55.000 0.00 0.00 0.00 4.40
2104 2303 1.156736 CAGGGAGCGTTTGGTTACTG 58.843 55.000 0.00 0.00 0.00 2.74
2105 2304 0.036306 CCAGGGAGCGTTTGGTTACT 59.964 55.000 0.00 0.00 0.00 2.24
2106 2305 1.583495 GCCAGGGAGCGTTTGGTTAC 61.583 60.000 0.00 0.00 34.43 2.50
2107 2306 1.302993 GCCAGGGAGCGTTTGGTTA 60.303 57.895 0.00 0.00 34.43 2.85
2108 2307 2.597510 GCCAGGGAGCGTTTGGTT 60.598 61.111 0.00 0.00 34.43 3.67
2109 2308 4.660938 GGCCAGGGAGCGTTTGGT 62.661 66.667 0.00 0.00 34.43 3.67
2110 2309 4.351054 AGGCCAGGGAGCGTTTGG 62.351 66.667 5.01 0.00 35.06 3.28
2111 2310 2.747855 GAGGCCAGGGAGCGTTTG 60.748 66.667 5.01 0.00 0.00 2.93
2112 2311 4.035102 GGAGGCCAGGGAGCGTTT 62.035 66.667 5.01 0.00 0.00 3.60
2120 2319 3.470888 ATTCCGACGGAGGCCAGG 61.471 66.667 17.51 0.00 31.21 4.45
2121 2320 2.202932 CATTCCGACGGAGGCCAG 60.203 66.667 17.51 2.91 31.21 4.85
2122 2321 2.682136 TCATTCCGACGGAGGCCA 60.682 61.111 17.51 2.06 31.21 5.36
2123 2322 1.389609 TACTCATTCCGACGGAGGCC 61.390 60.000 17.51 0.00 31.21 5.19
2124 2323 0.030908 CTACTCATTCCGACGGAGGC 59.969 60.000 17.51 0.00 31.21 4.70
2125 2324 0.030908 GCTACTCATTCCGACGGAGG 59.969 60.000 17.51 13.51 31.21 4.30
2126 2325 0.317103 CGCTACTCATTCCGACGGAG 60.317 60.000 17.51 8.02 31.21 4.63
2127 2326 0.745486 TCGCTACTCATTCCGACGGA 60.745 55.000 13.88 13.88 0.00 4.69
2128 2327 0.591741 GTCGCTACTCATTCCGACGG 60.592 60.000 7.84 7.84 40.27 4.79
2129 2328 2.856089 GTCGCTACTCATTCCGACG 58.144 57.895 0.00 0.00 40.27 5.12
2130 2329 0.454600 TGGTCGCTACTCATTCCGAC 59.545 55.000 3.68 3.68 46.60 4.79
2131 2330 0.454600 GTGGTCGCTACTCATTCCGA 59.545 55.000 0.00 0.00 0.00 4.55
2132 2331 0.172578 TGTGGTCGCTACTCATTCCG 59.827 55.000 0.00 0.00 0.00 4.30
2133 2332 2.604046 ATGTGGTCGCTACTCATTCC 57.396 50.000 0.00 0.00 0.00 3.01
2134 2333 3.043586 CGTATGTGGTCGCTACTCATTC 58.956 50.000 5.37 1.56 0.00 2.67
2135 2334 2.223735 CCGTATGTGGTCGCTACTCATT 60.224 50.000 5.37 0.00 0.00 2.57
2136 2335 1.337071 CCGTATGTGGTCGCTACTCAT 59.663 52.381 5.39 5.39 0.00 2.90
2137 2336 0.736636 CCGTATGTGGTCGCTACTCA 59.263 55.000 0.00 0.00 0.00 3.41
2138 2337 1.019673 TCCGTATGTGGTCGCTACTC 58.980 55.000 0.00 0.00 0.00 2.59
2139 2338 1.607628 GATCCGTATGTGGTCGCTACT 59.392 52.381 0.00 0.00 0.00 2.57
2140 2339 1.335810 TGATCCGTATGTGGTCGCTAC 59.664 52.381 0.00 0.00 0.00 3.58
2141 2340 1.682740 TGATCCGTATGTGGTCGCTA 58.317 50.000 0.00 0.00 0.00 4.26
2142 2341 0.821517 TTGATCCGTATGTGGTCGCT 59.178 50.000 0.00 0.00 0.00 4.93
2143 2342 1.526887 CATTGATCCGTATGTGGTCGC 59.473 52.381 0.00 0.00 0.00 5.19
2144 2343 1.526887 GCATTGATCCGTATGTGGTCG 59.473 52.381 0.00 0.00 0.00 4.79
2145 2344 2.545526 CTGCATTGATCCGTATGTGGTC 59.454 50.000 0.00 0.00 0.00 4.02
2146 2345 2.092968 ACTGCATTGATCCGTATGTGGT 60.093 45.455 0.00 0.00 0.00 4.16
2147 2346 2.288729 CACTGCATTGATCCGTATGTGG 59.711 50.000 0.00 0.00 0.00 4.17
2148 2347 2.288729 CCACTGCATTGATCCGTATGTG 59.711 50.000 5.49 0.00 0.00 3.21
2149 2348 2.092968 ACCACTGCATTGATCCGTATGT 60.093 45.455 5.49 0.00 0.00 2.29
2150 2349 2.545526 GACCACTGCATTGATCCGTATG 59.454 50.000 5.49 0.00 0.00 2.39
2151 2350 2.485479 GGACCACTGCATTGATCCGTAT 60.485 50.000 0.94 0.00 0.00 3.06
2152 2351 1.134521 GGACCACTGCATTGATCCGTA 60.135 52.381 0.94 0.00 0.00 4.02
2153 2352 0.392998 GGACCACTGCATTGATCCGT 60.393 55.000 0.94 0.00 0.00 4.69
2154 2353 0.107508 AGGACCACTGCATTGATCCG 60.108 55.000 11.61 0.00 0.00 4.18
2155 2354 1.386533 CAGGACCACTGCATTGATCC 58.613 55.000 9.49 9.49 40.97 3.36
2165 2364 2.472029 CAGGTTATCCTCAGGACCACT 58.528 52.381 0.00 0.00 43.07 4.00
2166 2365 1.134371 GCAGGTTATCCTCAGGACCAC 60.134 57.143 0.00 0.00 43.07 4.16
2167 2366 1.204146 GCAGGTTATCCTCAGGACCA 58.796 55.000 0.00 0.00 43.07 4.02
2168 2367 1.204146 TGCAGGTTATCCTCAGGACC 58.796 55.000 0.00 0.00 43.07 4.46
2169 2368 3.350219 TTTGCAGGTTATCCTCAGGAC 57.650 47.619 0.00 0.00 43.07 3.85
2170 2369 4.380843 TTTTTGCAGGTTATCCTCAGGA 57.619 40.909 0.00 0.00 43.07 3.86
2206 2405 9.638239 GCAGAAATGATATGGTTTTTAACAGAA 57.362 29.630 0.00 0.00 0.00 3.02
2207 2406 8.801299 TGCAGAAATGATATGGTTTTTAACAGA 58.199 29.630 0.00 0.00 0.00 3.41
2208 2407 8.984891 TGCAGAAATGATATGGTTTTTAACAG 57.015 30.769 0.00 0.00 0.00 3.16
2209 2408 8.584157 ACTGCAGAAATGATATGGTTTTTAACA 58.416 29.630 23.35 0.00 0.00 2.41
2210 2409 8.986477 ACTGCAGAAATGATATGGTTTTTAAC 57.014 30.769 23.35 0.00 0.00 2.01
2211 2410 9.638239 GAACTGCAGAAATGATATGGTTTTTAA 57.362 29.630 23.35 0.00 0.00 1.52
2212 2411 8.250332 GGAACTGCAGAAATGATATGGTTTTTA 58.750 33.333 23.35 0.00 0.00 1.52
2213 2412 7.099120 GGAACTGCAGAAATGATATGGTTTTT 58.901 34.615 23.35 0.00 0.00 1.94
2214 2413 6.211184 TGGAACTGCAGAAATGATATGGTTTT 59.789 34.615 23.35 0.00 0.00 2.43
2215 2414 5.716228 TGGAACTGCAGAAATGATATGGTTT 59.284 36.000 23.35 0.00 0.00 3.27
2216 2415 5.263599 TGGAACTGCAGAAATGATATGGTT 58.736 37.500 23.35 0.00 0.00 3.67
2217 2416 4.858850 TGGAACTGCAGAAATGATATGGT 58.141 39.130 23.35 0.00 0.00 3.55
2218 2417 5.008415 GTCTGGAACTGCAGAAATGATATGG 59.992 44.000 23.35 0.01 0.00 2.74
2219 2418 5.821470 AGTCTGGAACTGCAGAAATGATATG 59.179 40.000 23.35 1.39 36.65 1.78
2220 2419 5.999044 AGTCTGGAACTGCAGAAATGATAT 58.001 37.500 23.35 0.00 36.65 1.63
2221 2420 5.426689 AGTCTGGAACTGCAGAAATGATA 57.573 39.130 23.35 0.00 36.65 2.15
2222 2421 4.298103 AGTCTGGAACTGCAGAAATGAT 57.702 40.909 23.35 0.00 36.65 2.45
2223 2422 3.777106 AGTCTGGAACTGCAGAAATGA 57.223 42.857 23.35 8.77 36.65 2.57
2233 2432 0.773644 ATTGTGGGCAGTCTGGAACT 59.226 50.000 1.14 0.00 39.44 3.01
2234 2433 2.489938 TATTGTGGGCAGTCTGGAAC 57.510 50.000 1.14 0.00 0.00 3.62
2235 2434 3.420893 CTTTATTGTGGGCAGTCTGGAA 58.579 45.455 1.14 0.00 0.00 3.53
2236 2435 2.879756 GCTTTATTGTGGGCAGTCTGGA 60.880 50.000 1.14 0.00 0.00 3.86
2237 2436 1.474077 GCTTTATTGTGGGCAGTCTGG 59.526 52.381 1.14 0.00 0.00 3.86
2238 2437 2.161855 TGCTTTATTGTGGGCAGTCTG 58.838 47.619 0.00 0.00 0.00 3.51
2239 2438 2.584835 TGCTTTATTGTGGGCAGTCT 57.415 45.000 0.00 0.00 0.00 3.24
2240 2439 3.255642 TCTTTGCTTTATTGTGGGCAGTC 59.744 43.478 0.00 0.00 36.06 3.51
2241 2440 3.005791 GTCTTTGCTTTATTGTGGGCAGT 59.994 43.478 0.00 0.00 36.06 4.40
2242 2441 3.578688 GTCTTTGCTTTATTGTGGGCAG 58.421 45.455 0.00 0.00 36.06 4.85
2243 2442 2.030363 CGTCTTTGCTTTATTGTGGGCA 60.030 45.455 0.00 0.00 0.00 5.36
2244 2443 2.595386 CGTCTTTGCTTTATTGTGGGC 58.405 47.619 0.00 0.00 0.00 5.36
2245 2444 2.595386 GCGTCTTTGCTTTATTGTGGG 58.405 47.619 0.00 0.00 0.00 4.61
2246 2445 2.228822 AGGCGTCTTTGCTTTATTGTGG 59.771 45.455 0.00 0.00 34.52 4.17
2247 2446 3.559238 AGGCGTCTTTGCTTTATTGTG 57.441 42.857 0.00 0.00 34.52 3.33
2248 2447 4.069304 TGTAGGCGTCTTTGCTTTATTGT 58.931 39.130 0.00 0.00 34.52 2.71
2249 2448 4.403453 GTGTAGGCGTCTTTGCTTTATTG 58.597 43.478 0.00 0.00 34.52 1.90
2250 2449 3.124636 CGTGTAGGCGTCTTTGCTTTATT 59.875 43.478 0.00 0.00 34.52 1.40
2251 2450 2.671396 CGTGTAGGCGTCTTTGCTTTAT 59.329 45.455 0.00 0.00 34.52 1.40
2252 2451 2.063266 CGTGTAGGCGTCTTTGCTTTA 58.937 47.619 0.00 0.00 34.52 1.85
2253 2452 0.865769 CGTGTAGGCGTCTTTGCTTT 59.134 50.000 0.00 0.00 34.52 3.51
2254 2453 0.032952 TCGTGTAGGCGTCTTTGCTT 59.967 50.000 0.00 0.00 34.52 3.91
2255 2454 0.032952 TTCGTGTAGGCGTCTTTGCT 59.967 50.000 0.00 0.00 34.52 3.91
2256 2455 1.076332 ATTCGTGTAGGCGTCTTTGC 58.924 50.000 0.00 0.00 0.00 3.68
2257 2456 2.066262 ACATTCGTGTAGGCGTCTTTG 58.934 47.619 0.00 0.00 0.00 2.77
2258 2457 2.066262 CACATTCGTGTAGGCGTCTTT 58.934 47.619 0.00 0.00 38.41 2.52
2259 2458 1.710013 CACATTCGTGTAGGCGTCTT 58.290 50.000 0.00 0.00 38.41 3.01
2260 2459 0.736325 GCACATTCGTGTAGGCGTCT 60.736 55.000 0.00 0.00 45.50 4.18
2261 2460 1.693083 GGCACATTCGTGTAGGCGTC 61.693 60.000 0.00 0.00 45.50 5.19
2262 2461 1.740296 GGCACATTCGTGTAGGCGT 60.740 57.895 0.00 0.00 45.50 5.68
2263 2462 1.421410 GAGGCACATTCGTGTAGGCG 61.421 60.000 0.00 0.00 45.50 5.52
2264 2463 1.421410 CGAGGCACATTCGTGTAGGC 61.421 60.000 0.00 0.00 45.50 3.93
2265 2464 1.421410 GCGAGGCACATTCGTGTAGG 61.421 60.000 0.00 0.00 45.50 3.18
2266 2465 0.458543 AGCGAGGCACATTCGTGTAG 60.459 55.000 0.00 0.00 45.50 2.74
2267 2466 0.735978 CAGCGAGGCACATTCGTGTA 60.736 55.000 0.00 0.00 45.50 2.90
2268 2467 2.029288 CAGCGAGGCACATTCGTGT 61.029 57.895 0.00 0.00 45.50 4.49
2269 2468 0.735978 TACAGCGAGGCACATTCGTG 60.736 55.000 0.00 0.00 46.56 4.35
2270 2469 0.175760 ATACAGCGAGGCACATTCGT 59.824 50.000 0.00 0.00 40.08 3.85
2271 2470 0.855349 GATACAGCGAGGCACATTCG 59.145 55.000 0.00 0.00 40.85 3.34
2272 2471 2.231215 AGATACAGCGAGGCACATTC 57.769 50.000 0.00 0.00 0.00 2.67
2273 2472 3.819564 TTAGATACAGCGAGGCACATT 57.180 42.857 0.00 0.00 0.00 2.71
2274 2473 3.576118 AGATTAGATACAGCGAGGCACAT 59.424 43.478 0.00 0.00 0.00 3.21
2275 2474 2.959030 AGATTAGATACAGCGAGGCACA 59.041 45.455 0.00 0.00 0.00 4.57
2276 2475 3.651803 AGATTAGATACAGCGAGGCAC 57.348 47.619 0.00 0.00 0.00 5.01
2277 2476 4.399618 GGATAGATTAGATACAGCGAGGCA 59.600 45.833 0.00 0.00 0.00 4.75
2278 2477 4.202070 GGGATAGATTAGATACAGCGAGGC 60.202 50.000 0.00 0.00 0.00 4.70
2279 2478 4.950475 TGGGATAGATTAGATACAGCGAGG 59.050 45.833 0.00 0.00 0.00 4.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.