Multiple sequence alignment - TraesCS3B01G154100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G154100 chr3B 100.000 3041 0 0 1 3041 146658822 146661862 0.000000e+00 5616.0
1 TraesCS3B01G154100 chr3D 90.886 2721 160 27 6 2692 95610524 95613190 0.000000e+00 3570.0
2 TraesCS3B01G154100 chr3A 86.964 1680 151 31 452 2105 113870140 113871777 0.000000e+00 1827.0
3 TraesCS3B01G154100 chr3A 83.495 103 16 1 2592 2693 552936427 552936529 8.980000e-16 95.3
4 TraesCS3B01G154100 chr3A 86.364 66 4 3 7 67 113869622 113869687 1.960000e-07 67.6
5 TraesCS3B01G154100 chr4B 77.612 469 72 23 2592 3034 99803849 99804310 1.400000e-63 254.0
6 TraesCS3B01G154100 chr4A 76.433 471 79 20 2595 3039 516639439 516639903 3.050000e-55 226.0
7 TraesCS3B01G154100 chr1B 79.070 301 56 7 2743 3040 331394532 331394236 1.850000e-47 200.0
8 TraesCS3B01G154100 chr1B 79.795 292 40 16 2743 3024 213586229 213586511 8.600000e-46 195.0
9 TraesCS3B01G154100 chr6B 75.527 474 75 24 2594 3040 690788798 690789257 8.600000e-46 195.0
10 TraesCS3B01G154100 chr6B 83.000 100 17 0 2594 2693 465317276 465317375 1.160000e-14 91.6
11 TraesCS3B01G154100 chr5D 75.162 463 88 20 2592 3034 377479268 377479723 3.090000e-45 193.0
12 TraesCS3B01G154100 chr1D 78.305 295 57 7 2743 3034 246669331 246669621 1.860000e-42 183.0
13 TraesCS3B01G154100 chr1D 82.353 102 18 0 2592 2693 170905248 170905147 4.180000e-14 89.8
14 TraesCS3B01G154100 chr5A 80.400 250 40 8 2742 2989 126293893 126294135 6.700000e-42 182.0
15 TraesCS3B01G154100 chr5A 84.158 101 15 1 2592 2691 269060753 269060853 2.500000e-16 97.1
16 TraesCS3B01G154100 chr5A 95.556 45 2 0 2265 2309 692788975 692789019 4.210000e-09 73.1
17 TraesCS3B01G154100 chr7A 74.681 470 80 16 2592 3032 636192309 636192768 4.030000e-39 172.0
18 TraesCS3B01G154100 chr7A 77.627 295 55 9 2743 3032 636246731 636247019 5.210000e-38 169.0
19 TraesCS3B01G154100 chr5B 73.876 467 85 27 2592 3029 552863702 552864160 5.250000e-33 152.0
20 TraesCS3B01G154100 chr2D 76.159 302 63 9 2742 3040 148863233 148862938 1.890000e-32 150.0
21 TraesCS3B01G154100 chr2B 83.333 102 17 0 2592 2693 538246281 538246382 8.980000e-16 95.3
22 TraesCS3B01G154100 chr2B 80.392 102 17 3 2646 2745 781668232 781668132 1.170000e-09 75.0
23 TraesCS3B01G154100 chr6A 82.524 103 17 1 2592 2693 408246786 408246888 4.180000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G154100 chr3B 146658822 146661862 3040 False 5616.0 5616 100.000 1 3041 1 chr3B.!!$F1 3040
1 TraesCS3B01G154100 chr3D 95610524 95613190 2666 False 3570.0 3570 90.886 6 2692 1 chr3D.!!$F1 2686
2 TraesCS3B01G154100 chr3A 113869622 113871777 2155 False 947.3 1827 86.664 7 2105 2 chr3A.!!$F2 2098

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
607 722 0.028505 CGCAATGCAGCTACATGTCC 59.971 55.0 0.0 0.0 0.0 4.02 F
842 980 0.248866 CCAAGAACCACACCGCAAAC 60.249 55.0 0.0 0.0 0.0 2.93 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2010 2162 1.039233 ATGCCGCTTTCCTTGGATGG 61.039 55.0 0.0 0.0 0.0 3.51 R
2728 2890 0.108585 GGTGTGCTTGGAGGTCTTCA 59.891 55.0 0.0 0.0 0.0 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
76 116 2.583441 CGGTCTCTTCACCCTGCCA 61.583 63.158 0.00 0.00 31.99 4.92
94 140 7.051623 CCCTGCCACAAATTACTGTAGTAATA 58.948 38.462 15.48 0.90 46.98 0.98
193 239 0.170561 ACTCGATCGGGAAACAGACG 59.829 55.000 24.50 0.00 37.37 4.18
229 297 3.777087 TGACACATCCCCACATTGAATT 58.223 40.909 0.00 0.00 0.00 2.17
269 337 2.159212 TCAACTCGTGACTTTGAACGGA 60.159 45.455 0.00 0.00 40.18 4.69
344 412 5.966742 AACTTTTGGCTAATTCTCAGTCC 57.033 39.130 0.00 0.00 0.00 3.85
346 414 4.043435 ACTTTTGGCTAATTCTCAGTCCCT 59.957 41.667 0.00 0.00 0.00 4.20
347 415 5.250774 ACTTTTGGCTAATTCTCAGTCCCTA 59.749 40.000 0.00 0.00 0.00 3.53
351 450 6.327386 TGGCTAATTCTCAGTCCCTAAAAT 57.673 37.500 0.00 0.00 0.00 1.82
356 455 6.916360 AATTCTCAGTCCCTAAAATTTGCA 57.084 33.333 0.00 0.00 0.00 4.08
361 460 7.402054 TCTCAGTCCCTAAAATTTGCATAAGA 58.598 34.615 0.00 0.00 0.00 2.10
362 461 7.336931 TCTCAGTCCCTAAAATTTGCATAAGAC 59.663 37.037 0.00 0.00 0.00 3.01
366 465 9.528489 AGTCCCTAAAATTTGCATAAGACTAAA 57.472 29.630 0.00 0.00 0.00 1.85
367 466 9.569167 GTCCCTAAAATTTGCATAAGACTAAAC 57.431 33.333 0.00 0.00 0.00 2.01
368 467 9.528489 TCCCTAAAATTTGCATAAGACTAAACT 57.472 29.630 0.00 0.00 0.00 2.66
369 468 9.788960 CCCTAAAATTTGCATAAGACTAAACTC 57.211 33.333 0.00 0.00 0.00 3.01
370 469 9.788960 CCTAAAATTTGCATAAGACTAAACTCC 57.211 33.333 0.00 0.00 0.00 3.85
374 473 4.487714 TGCATAAGACTAAACTCCCCTG 57.512 45.455 0.00 0.00 0.00 4.45
384 483 5.342866 ACTAAACTCCCCTGAGATTACACT 58.657 41.667 0.00 0.00 41.42 3.55
385 484 6.500336 ACTAAACTCCCCTGAGATTACACTA 58.500 40.000 0.00 0.00 41.42 2.74
403 502 2.492484 ACTAGCGAGGTAAAGGTGTGAG 59.508 50.000 0.00 0.00 0.00 3.51
404 503 1.339097 AGCGAGGTAAAGGTGTGAGT 58.661 50.000 0.00 0.00 0.00 3.41
412 511 3.949113 GGTAAAGGTGTGAGTTGGTGAAA 59.051 43.478 0.00 0.00 0.00 2.69
424 523 5.417266 TGAGTTGGTGAAACATTGAGACAAA 59.583 36.000 0.00 0.00 41.61 2.83
425 524 5.894807 AGTTGGTGAAACATTGAGACAAAG 58.105 37.500 0.00 0.00 41.61 2.77
437 536 0.689623 AGACAAAGAGCTGGGACTGG 59.310 55.000 0.00 0.00 0.00 4.00
450 555 4.385754 GCTGGGACTGGAATTTAAGGAGAT 60.386 45.833 0.00 0.00 0.00 2.75
458 563 9.651913 GACTGGAATTTAAGGAGATATCAGATC 57.348 37.037 5.32 0.00 0.00 2.75
479 584 4.842029 TCAATTTTGTTTTGCGAATTGCC 58.158 34.783 0.00 0.00 45.60 4.52
482 587 6.203530 TCAATTTTGTTTTGCGAATTGCCATA 59.796 30.769 0.00 0.00 45.60 2.74
517 623 6.283694 TCAGATTACTTTCTGAATCGGGATG 58.716 40.000 1.81 0.00 46.92 3.51
540 655 1.228245 AGTGCTGATGCCGGTTTGT 60.228 52.632 1.90 0.00 38.71 2.83
549 664 3.692101 TGATGCCGGTTTGTAGTATTTGG 59.308 43.478 1.90 0.00 0.00 3.28
588 703 2.417933 CAGTTGTATTCTGACTGGCAGC 59.582 50.000 15.89 8.22 44.52 5.25
607 722 0.028505 CGCAATGCAGCTACATGTCC 59.971 55.000 0.00 0.00 0.00 4.02
609 724 1.372582 CAATGCAGCTACATGTCCGT 58.627 50.000 0.00 0.00 0.00 4.69
614 729 1.369625 CAGCTACATGTCCGTTTCCC 58.630 55.000 0.00 0.00 0.00 3.97
634 749 1.134580 CGTGATCTTGACATGGAGCCT 60.135 52.381 0.00 0.00 0.00 4.58
640 755 1.554160 CTTGACATGGAGCCTGAGAGT 59.446 52.381 0.00 0.00 0.00 3.24
641 756 0.900421 TGACATGGAGCCTGAGAGTG 59.100 55.000 0.00 0.00 0.00 3.51
642 757 1.189752 GACATGGAGCCTGAGAGTGA 58.810 55.000 0.00 0.00 0.00 3.41
643 758 1.136695 GACATGGAGCCTGAGAGTGAG 59.863 57.143 0.00 0.00 0.00 3.51
644 759 1.272928 ACATGGAGCCTGAGAGTGAGA 60.273 52.381 0.00 0.00 0.00 3.27
645 760 1.409790 CATGGAGCCTGAGAGTGAGAG 59.590 57.143 0.00 0.00 0.00 3.20
659 774 6.084326 AGAGTGAGAGAGACTGTTCTTTTC 57.916 41.667 0.00 0.00 29.47 2.29
664 779 5.104527 TGAGAGAGACTGTTCTTTTCCCAAA 60.105 40.000 0.00 0.00 29.47 3.28
699 832 6.305638 GCTAAACAAAATGGAGCGAACTAAAG 59.694 38.462 0.00 0.00 0.00 1.85
706 839 0.714439 GAGCGAACTAAAGGTGACGC 59.286 55.000 0.00 0.00 46.38 5.19
712 845 0.319297 ACTAAAGGTGACGCGACCAC 60.319 55.000 15.93 19.75 38.63 4.16
724 857 1.267832 CGCGACCACCGGAATTTTATG 60.268 52.381 9.46 0.00 39.04 1.90
749 882 1.670791 TTGAAAGTTGACCGTGGGAC 58.329 50.000 0.00 0.00 0.00 4.46
759 892 0.470766 ACCGTGGGACAACTAAGCAA 59.529 50.000 0.00 0.00 44.16 3.91
800 934 3.249080 GCGTTAACACAGCTAAGGTTCAA 59.751 43.478 6.39 0.00 0.00 2.69
842 980 0.248866 CCAAGAACCACACCGCAAAC 60.249 55.000 0.00 0.00 0.00 2.93
932 1075 3.545624 CGATCTCGTCGGAAATCGTAAGT 60.546 47.826 13.20 0.00 46.47 2.24
1026 1175 3.952675 AATGGCATTAGCGCGGCG 61.953 61.111 19.62 19.62 43.41 6.46
1167 1316 4.436998 CAGGTCCACGACGGCCTC 62.437 72.222 0.00 0.00 38.73 4.70
1508 1657 2.258726 GCGAGGTGCGGGAGTTTTT 61.259 57.895 0.00 0.00 41.29 1.94
1650 1799 4.116328 CTCGAGGCCGCTGTCGAA 62.116 66.667 14.82 1.37 44.19 3.71
1651 1800 4.415332 TCGAGGCCGCTGTCGAAC 62.415 66.667 11.99 0.00 42.05 3.95
1791 1940 2.269241 GGGAAGGCCAAGGACGAG 59.731 66.667 5.01 0.00 35.15 4.18
1895 2044 1.330655 ATGGTGGCCGAGGTGAGTAG 61.331 60.000 0.00 0.00 0.00 2.57
1919 2068 1.600916 GGAAGGAGCAAAGCACGGT 60.601 57.895 0.00 0.00 0.00 4.83
2001 2153 3.827898 CTCGAGACTGGGCCGTCC 61.828 72.222 19.96 12.86 34.46 4.79
2029 2181 1.039233 CCATCCAAGGAAAGCGGCAT 61.039 55.000 1.45 0.00 0.00 4.40
2045 2197 2.669364 GGCATCAGCAGTTTGAGTTTG 58.331 47.619 0.00 0.00 44.61 2.93
2071 2223 7.283127 GGAGCTTCTCATCAAATTAACCATACA 59.717 37.037 0.00 0.00 31.08 2.29
2106 2258 9.838339 AAAACAAATCAAATTAACCATACCACA 57.162 25.926 0.00 0.00 0.00 4.17
2109 2261 9.651913 ACAAATCAAATTAACCATACCACATTC 57.348 29.630 0.00 0.00 0.00 2.67
2110 2262 9.874205 CAAATCAAATTAACCATACCACATTCT 57.126 29.630 0.00 0.00 0.00 2.40
2156 2308 9.490379 ACATATTTGGTACTACTATTAGCTTGC 57.510 33.333 0.00 0.00 0.00 4.01
2218 2370 8.862325 ATACAGTTGTGTTCTTTGATCCATTA 57.138 30.769 0.00 0.00 38.19 1.90
2253 2405 7.938140 AAAGAAAAGCCTAGTGCATTGTATA 57.062 32.000 0.00 0.00 44.83 1.47
2275 2427 3.955650 TGCACTCTAAACTACACCCTC 57.044 47.619 0.00 0.00 0.00 4.30
2281 2433 6.289064 CACTCTAAACTACACCCTCTGTTTT 58.711 40.000 0.00 0.00 34.88 2.43
2282 2434 6.766467 CACTCTAAACTACACCCTCTGTTTTT 59.234 38.462 0.00 0.00 34.88 1.94
2325 2478 6.396450 CAGTTTAAACTAAAACGCCAAAACG 58.604 36.000 20.15 0.00 42.83 3.60
2337 2490 3.814283 ACGCCAAAACGTCCTACATTTAA 59.186 39.130 0.00 0.00 44.43 1.52
2343 2496 7.081976 CCAAAACGTCCTACATTTAAGAAAGG 58.918 38.462 0.00 0.00 0.00 3.11
2346 2499 6.600882 ACGTCCTACATTTAAGAAAGGAGA 57.399 37.500 0.00 0.00 37.03 3.71
2347 2500 7.184067 ACGTCCTACATTTAAGAAAGGAGAT 57.816 36.000 0.00 0.00 37.03 2.75
2374 2527 0.244450 GTGATACCCCACGACGTTGA 59.756 55.000 10.51 0.00 0.00 3.18
2377 2530 0.899720 ATACCCCACGACGTTGATGT 59.100 50.000 10.51 3.41 0.00 3.06
2495 2648 9.702253 TGAGAGGAATATATTAGTAGGACCATC 57.298 37.037 0.00 0.00 0.00 3.51
2545 2698 9.314133 TGCTTAGATACATATCATCTAGTGGTT 57.686 33.333 1.88 0.00 36.59 3.67
2575 2728 1.921982 TATGCATTTGCCACACTGGT 58.078 45.000 3.54 0.00 40.46 4.00
2577 2730 1.246649 TGCATTTGCCACACTGGTAG 58.753 50.000 0.00 0.00 40.46 3.18
2578 2731 1.247567 GCATTTGCCACACTGGTAGT 58.752 50.000 0.00 0.00 40.46 2.73
2640 2801 5.871396 ACCTATTCCATCATGACTTACGT 57.129 39.130 0.00 0.00 0.00 3.57
2643 2804 2.863401 TCCATCATGACTTACGTCCG 57.137 50.000 0.00 0.00 39.47 4.79
2644 2805 2.097036 TCCATCATGACTTACGTCCGT 58.903 47.619 0.00 0.00 39.47 4.69
2677 2839 6.436027 AGTCTCATTAGGGTAGATCTTCACA 58.564 40.000 0.00 0.00 0.00 3.58
2687 2849 5.187186 GGGTAGATCTTCACAAAGTAGGTGA 59.813 44.000 0.00 0.00 43.12 4.02
2692 2854 5.407407 TCTTCACAAAGTAGGTGATCTCC 57.593 43.478 5.64 5.64 44.11 3.71
2693 2855 3.868757 TCACAAAGTAGGTGATCTCCG 57.131 47.619 8.14 0.00 40.16 4.63
2694 2856 3.427573 TCACAAAGTAGGTGATCTCCGA 58.572 45.455 8.14 0.07 40.16 4.55
2695 2857 3.830178 TCACAAAGTAGGTGATCTCCGAA 59.170 43.478 8.14 0.00 40.16 4.30
2696 2858 3.927142 CACAAAGTAGGTGATCTCCGAAC 59.073 47.826 8.14 10.39 38.54 3.95
2697 2859 3.056035 ACAAAGTAGGTGATCTCCGAACC 60.056 47.826 14.83 5.19 0.00 3.62
2698 2860 1.777941 AGTAGGTGATCTCCGAACCC 58.222 55.000 14.83 2.49 34.29 4.11
2699 2861 1.006758 AGTAGGTGATCTCCGAACCCA 59.993 52.381 14.83 0.00 34.29 4.51
2700 2862 2.040178 GTAGGTGATCTCCGAACCCAT 58.960 52.381 8.14 0.00 34.29 4.00
2701 2863 2.471815 AGGTGATCTCCGAACCCATA 57.528 50.000 8.14 0.00 34.29 2.74
2702 2864 2.977808 AGGTGATCTCCGAACCCATAT 58.022 47.619 8.14 0.00 34.29 1.78
2703 2865 4.127918 AGGTGATCTCCGAACCCATATA 57.872 45.455 8.14 0.00 34.29 0.86
2704 2866 4.090090 AGGTGATCTCCGAACCCATATAG 58.910 47.826 8.14 0.00 34.29 1.31
2705 2867 4.087182 GGTGATCTCCGAACCCATATAGA 58.913 47.826 0.00 0.00 0.00 1.98
2706 2868 4.082136 GGTGATCTCCGAACCCATATAGAC 60.082 50.000 0.00 0.00 0.00 2.59
2707 2869 3.756963 TGATCTCCGAACCCATATAGACG 59.243 47.826 0.00 0.00 0.00 4.18
2708 2870 3.219176 TCTCCGAACCCATATAGACGT 57.781 47.619 0.00 0.00 0.00 4.34
2709 2871 3.559069 TCTCCGAACCCATATAGACGTT 58.441 45.455 0.00 0.00 0.00 3.99
2710 2872 3.956199 TCTCCGAACCCATATAGACGTTT 59.044 43.478 0.00 0.00 0.00 3.60
2711 2873 4.403432 TCTCCGAACCCATATAGACGTTTT 59.597 41.667 0.00 0.00 0.00 2.43
2712 2874 4.435425 TCCGAACCCATATAGACGTTTTG 58.565 43.478 0.00 0.00 0.00 2.44
2713 2875 3.001939 CCGAACCCATATAGACGTTTTGC 59.998 47.826 0.00 0.00 0.00 3.68
2714 2876 3.001939 CGAACCCATATAGACGTTTTGCC 59.998 47.826 0.00 0.00 0.00 4.52
2715 2877 3.926058 ACCCATATAGACGTTTTGCCT 57.074 42.857 0.00 0.00 0.00 4.75
2716 2878 4.230745 ACCCATATAGACGTTTTGCCTT 57.769 40.909 0.00 0.00 0.00 4.35
2717 2879 4.196971 ACCCATATAGACGTTTTGCCTTC 58.803 43.478 0.00 0.00 0.00 3.46
2718 2880 4.080526 ACCCATATAGACGTTTTGCCTTCT 60.081 41.667 0.00 0.00 0.00 2.85
2719 2881 4.881850 CCCATATAGACGTTTTGCCTTCTT 59.118 41.667 0.00 0.00 0.00 2.52
2720 2882 5.007724 CCCATATAGACGTTTTGCCTTCTTC 59.992 44.000 0.00 0.00 0.00 2.87
2721 2883 5.584649 CCATATAGACGTTTTGCCTTCTTCA 59.415 40.000 0.00 0.00 0.00 3.02
2722 2884 6.456988 CCATATAGACGTTTTGCCTTCTTCAC 60.457 42.308 0.00 0.00 0.00 3.18
2723 2885 2.639065 AGACGTTTTGCCTTCTTCACA 58.361 42.857 0.00 0.00 0.00 3.58
2724 2886 3.013921 AGACGTTTTGCCTTCTTCACAA 58.986 40.909 0.00 0.00 0.00 3.33
2725 2887 3.442273 AGACGTTTTGCCTTCTTCACAAA 59.558 39.130 0.00 0.00 0.00 2.83
2726 2888 3.507786 ACGTTTTGCCTTCTTCACAAAC 58.492 40.909 0.00 0.00 33.29 2.93
2727 2889 3.192633 ACGTTTTGCCTTCTTCACAAACT 59.807 39.130 0.00 0.00 33.29 2.66
2728 2890 4.173256 CGTTTTGCCTTCTTCACAAACTT 58.827 39.130 0.00 0.00 33.29 2.66
2729 2891 4.031652 CGTTTTGCCTTCTTCACAAACTTG 59.968 41.667 0.00 0.00 33.29 3.16
2730 2892 5.167845 GTTTTGCCTTCTTCACAAACTTGA 58.832 37.500 0.00 0.00 33.29 3.02
2731 2893 5.398603 TTTGCCTTCTTCACAAACTTGAA 57.601 34.783 0.00 0.00 34.30 2.69
2739 2901 3.924114 TCACAAACTTGAAGACCTCCA 57.076 42.857 0.00 0.00 0.00 3.86
2740 2902 4.229304 TCACAAACTTGAAGACCTCCAA 57.771 40.909 0.00 0.00 0.00 3.53
2741 2903 4.199310 TCACAAACTTGAAGACCTCCAAG 58.801 43.478 0.00 0.00 43.84 3.61
2742 2904 2.952310 ACAAACTTGAAGACCTCCAAGC 59.048 45.455 0.00 0.00 42.46 4.01
2743 2905 2.951642 CAAACTTGAAGACCTCCAAGCA 59.048 45.455 0.00 0.00 42.46 3.91
2744 2906 2.262423 ACTTGAAGACCTCCAAGCAC 57.738 50.000 0.00 0.00 42.46 4.40
2745 2907 1.490490 ACTTGAAGACCTCCAAGCACA 59.510 47.619 0.00 0.00 42.46 4.57
2746 2908 1.876156 CTTGAAGACCTCCAAGCACAC 59.124 52.381 0.00 0.00 34.20 3.82
2747 2909 0.108585 TGAAGACCTCCAAGCACACC 59.891 55.000 0.00 0.00 0.00 4.16
2748 2910 0.606673 GAAGACCTCCAAGCACACCC 60.607 60.000 0.00 0.00 0.00 4.61
2749 2911 1.062488 AAGACCTCCAAGCACACCCT 61.062 55.000 0.00 0.00 0.00 4.34
2750 2912 1.062488 AGACCTCCAAGCACACCCTT 61.062 55.000 0.00 0.00 0.00 3.95
2751 2913 0.606673 GACCTCCAAGCACACCCTTC 60.607 60.000 0.00 0.00 0.00 3.46
2752 2914 1.352622 ACCTCCAAGCACACCCTTCA 61.353 55.000 0.00 0.00 0.00 3.02
2753 2915 0.178992 CCTCCAAGCACACCCTTCAA 60.179 55.000 0.00 0.00 0.00 2.69
2754 2916 1.691196 CTCCAAGCACACCCTTCAAA 58.309 50.000 0.00 0.00 0.00 2.69
2755 2917 2.031120 CTCCAAGCACACCCTTCAAAA 58.969 47.619 0.00 0.00 0.00 2.44
2756 2918 2.031120 TCCAAGCACACCCTTCAAAAG 58.969 47.619 0.00 0.00 0.00 2.27
2757 2919 1.756538 CCAAGCACACCCTTCAAAAGT 59.243 47.619 0.00 0.00 0.00 2.66
2758 2920 2.955660 CCAAGCACACCCTTCAAAAGTA 59.044 45.455 0.00 0.00 0.00 2.24
2759 2921 3.383185 CCAAGCACACCCTTCAAAAGTAA 59.617 43.478 0.00 0.00 0.00 2.24
2760 2922 4.359706 CAAGCACACCCTTCAAAAGTAAC 58.640 43.478 0.00 0.00 0.00 2.50
2761 2923 3.626930 AGCACACCCTTCAAAAGTAACA 58.373 40.909 0.00 0.00 0.00 2.41
2762 2924 4.020543 AGCACACCCTTCAAAAGTAACAA 58.979 39.130 0.00 0.00 0.00 2.83
2763 2925 4.097892 AGCACACCCTTCAAAAGTAACAAG 59.902 41.667 0.00 0.00 0.00 3.16
2764 2926 4.097286 GCACACCCTTCAAAAGTAACAAGA 59.903 41.667 0.00 0.00 0.00 3.02
2765 2927 5.221244 GCACACCCTTCAAAAGTAACAAGAT 60.221 40.000 0.00 0.00 0.00 2.40
2766 2928 6.208644 CACACCCTTCAAAAGTAACAAGATG 58.791 40.000 0.00 0.00 0.00 2.90
2767 2929 5.301805 ACACCCTTCAAAAGTAACAAGATGG 59.698 40.000 0.00 0.00 0.00 3.51
2768 2930 5.534654 CACCCTTCAAAAGTAACAAGATGGA 59.465 40.000 0.00 0.00 0.00 3.41
2769 2931 6.209391 CACCCTTCAAAAGTAACAAGATGGAT 59.791 38.462 0.00 0.00 0.00 3.41
2770 2932 6.209391 ACCCTTCAAAAGTAACAAGATGGATG 59.791 38.462 0.00 0.00 0.00 3.51
2771 2933 6.209391 CCCTTCAAAAGTAACAAGATGGATGT 59.791 38.462 0.00 0.00 0.00 3.06
2772 2934 7.255942 CCCTTCAAAAGTAACAAGATGGATGTT 60.256 37.037 0.00 0.00 43.14 2.71
2773 2935 7.596248 CCTTCAAAAGTAACAAGATGGATGTTG 59.404 37.037 2.37 0.00 40.95 3.33
2774 2936 6.446318 TCAAAAGTAACAAGATGGATGTTGC 58.554 36.000 2.37 1.22 40.95 4.17
2778 2940 6.992063 AGTAACAAGATGGATGTTGCTTAG 57.008 37.500 4.51 0.00 46.91 2.18
2779 2941 5.882557 AGTAACAAGATGGATGTTGCTTAGG 59.117 40.000 4.51 0.00 46.91 2.69
2780 2942 4.307032 ACAAGATGGATGTTGCTTAGGT 57.693 40.909 0.00 0.00 34.72 3.08
2781 2943 5.435686 ACAAGATGGATGTTGCTTAGGTA 57.564 39.130 0.00 0.00 34.72 3.08
2782 2944 5.815581 ACAAGATGGATGTTGCTTAGGTAA 58.184 37.500 0.00 0.00 34.72 2.85
2783 2945 6.426587 ACAAGATGGATGTTGCTTAGGTAAT 58.573 36.000 0.00 0.00 34.72 1.89
2784 2946 6.319658 ACAAGATGGATGTTGCTTAGGTAATG 59.680 38.462 0.00 0.00 34.72 1.90
2785 2947 6.252599 AGATGGATGTTGCTTAGGTAATGA 57.747 37.500 0.00 0.00 0.00 2.57
2786 2948 6.662755 AGATGGATGTTGCTTAGGTAATGAA 58.337 36.000 0.00 0.00 0.00 2.57
2787 2949 7.293073 AGATGGATGTTGCTTAGGTAATGAAT 58.707 34.615 0.00 0.00 0.00 2.57
2788 2950 6.942532 TGGATGTTGCTTAGGTAATGAATC 57.057 37.500 0.00 0.00 0.00 2.52
2789 2951 5.827797 TGGATGTTGCTTAGGTAATGAATCC 59.172 40.000 7.53 7.53 31.65 3.01
2790 2952 5.241728 GGATGTTGCTTAGGTAATGAATCCC 59.758 44.000 0.00 0.00 0.00 3.85
2791 2953 5.450818 TGTTGCTTAGGTAATGAATCCCT 57.549 39.130 0.00 0.00 0.00 4.20
2792 2954 5.826643 TGTTGCTTAGGTAATGAATCCCTT 58.173 37.500 0.00 0.00 0.00 3.95
2793 2955 5.652014 TGTTGCTTAGGTAATGAATCCCTTG 59.348 40.000 0.00 0.00 0.00 3.61
2794 2956 4.207165 TGCTTAGGTAATGAATCCCTTGC 58.793 43.478 0.00 0.00 0.00 4.01
2795 2957 4.079787 TGCTTAGGTAATGAATCCCTTGCT 60.080 41.667 0.00 0.00 31.90 3.91
2796 2958 4.517075 GCTTAGGTAATGAATCCCTTGCTC 59.483 45.833 0.00 0.00 0.00 4.26
2797 2959 5.688766 GCTTAGGTAATGAATCCCTTGCTCT 60.689 44.000 0.00 0.00 0.00 4.09
2798 2960 4.870021 AGGTAATGAATCCCTTGCTCTT 57.130 40.909 0.00 0.00 0.00 2.85
2799 2961 4.530875 AGGTAATGAATCCCTTGCTCTTG 58.469 43.478 0.00 0.00 0.00 3.02
2800 2962 4.018050 AGGTAATGAATCCCTTGCTCTTGT 60.018 41.667 0.00 0.00 0.00 3.16
2801 2963 4.096984 GGTAATGAATCCCTTGCTCTTGTG 59.903 45.833 0.00 0.00 0.00 3.33
2802 2964 1.538047 TGAATCCCTTGCTCTTGTGC 58.462 50.000 0.00 0.00 0.00 4.57
2803 2965 1.074405 TGAATCCCTTGCTCTTGTGCT 59.926 47.619 0.00 0.00 0.00 4.40
2804 2966 2.165998 GAATCCCTTGCTCTTGTGCTT 58.834 47.619 0.00 0.00 0.00 3.91
2805 2967 1.831580 ATCCCTTGCTCTTGTGCTTC 58.168 50.000 0.00 0.00 0.00 3.86
2806 2968 0.473755 TCCCTTGCTCTTGTGCTTCA 59.526 50.000 0.00 0.00 0.00 3.02
2807 2969 1.133823 TCCCTTGCTCTTGTGCTTCAA 60.134 47.619 0.00 0.00 34.61 2.69
2808 2970 1.682854 CCCTTGCTCTTGTGCTTCAAA 59.317 47.619 0.00 0.00 35.48 2.69
2809 2971 2.101249 CCCTTGCTCTTGTGCTTCAAAA 59.899 45.455 0.00 0.00 35.48 2.44
2810 2972 3.378339 CCTTGCTCTTGTGCTTCAAAAG 58.622 45.455 0.00 0.00 35.48 2.27
2811 2973 3.067180 CCTTGCTCTTGTGCTTCAAAAGA 59.933 43.478 0.16 0.16 35.59 2.52
2812 2974 4.261909 CCTTGCTCTTGTGCTTCAAAAGAT 60.262 41.667 0.40 0.00 37.13 2.40
2813 2975 5.048504 CCTTGCTCTTGTGCTTCAAAAGATA 60.049 40.000 0.40 0.00 37.13 1.98
2814 2976 6.389830 TTGCTCTTGTGCTTCAAAAGATAA 57.610 33.333 0.40 0.00 37.13 1.75
2815 2977 6.579666 TGCTCTTGTGCTTCAAAAGATAAT 57.420 33.333 0.40 0.00 37.13 1.28
2816 2978 6.615088 TGCTCTTGTGCTTCAAAAGATAATC 58.385 36.000 0.40 0.00 37.13 1.75
2817 2979 6.432162 TGCTCTTGTGCTTCAAAAGATAATCT 59.568 34.615 0.40 0.00 37.13 2.40
2818 2980 7.040201 TGCTCTTGTGCTTCAAAAGATAATCTT 60.040 33.333 0.40 0.00 37.13 2.40
2819 2981 7.484324 GCTCTTGTGCTTCAAAAGATAATCTTC 59.516 37.037 0.40 0.00 37.13 2.87
2820 2982 8.627208 TCTTGTGCTTCAAAAGATAATCTTCT 57.373 30.769 0.00 0.00 35.27 2.85
2821 2983 8.725148 TCTTGTGCTTCAAAAGATAATCTTCTC 58.275 33.333 0.00 0.00 35.27 2.87
2822 2984 7.984422 TGTGCTTCAAAAGATAATCTTCTCA 57.016 32.000 0.00 0.00 35.27 3.27
2823 2985 8.037382 TGTGCTTCAAAAGATAATCTTCTCAG 57.963 34.615 0.00 0.00 35.27 3.35
2824 2986 6.966066 GTGCTTCAAAAGATAATCTTCTCAGC 59.034 38.462 0.00 0.00 35.27 4.26
2825 2987 6.656270 TGCTTCAAAAGATAATCTTCTCAGCA 59.344 34.615 0.00 0.00 35.27 4.41
2826 2988 7.148289 TGCTTCAAAAGATAATCTTCTCAGCAG 60.148 37.037 0.00 0.00 35.27 4.24
2827 2989 7.148272 GCTTCAAAAGATAATCTTCTCAGCAGT 60.148 37.037 0.00 0.00 35.27 4.40
2828 2990 8.627208 TTCAAAAGATAATCTTCTCAGCAGTT 57.373 30.769 0.00 0.00 35.27 3.16
2829 2991 9.725019 TTCAAAAGATAATCTTCTCAGCAGTTA 57.275 29.630 0.00 0.00 35.27 2.24
2830 2992 9.725019 TCAAAAGATAATCTTCTCAGCAGTTAA 57.275 29.630 0.00 0.00 35.27 2.01
2833 2995 9.732130 AAAGATAATCTTCTCAGCAGTTAAACT 57.268 29.630 0.00 0.00 35.27 2.66
2834 2996 9.732130 AAGATAATCTTCTCAGCAGTTAAACTT 57.268 29.630 0.00 0.00 28.99 2.66
2835 2997 9.377312 AGATAATCTTCTCAGCAGTTAAACTTC 57.623 33.333 0.00 0.00 0.00 3.01
2836 2998 6.809630 AATCTTCTCAGCAGTTAAACTTCC 57.190 37.500 0.00 0.00 0.00 3.46
2837 2999 5.552870 TCTTCTCAGCAGTTAAACTTCCT 57.447 39.130 0.00 0.00 0.00 3.36
2838 3000 5.542779 TCTTCTCAGCAGTTAAACTTCCTC 58.457 41.667 0.00 0.00 0.00 3.71
2839 3001 4.955811 TCTCAGCAGTTAAACTTCCTCA 57.044 40.909 0.00 0.00 0.00 3.86
2840 3002 5.290493 TCTCAGCAGTTAAACTTCCTCAA 57.710 39.130 0.00 0.00 0.00 3.02
2841 3003 5.300752 TCTCAGCAGTTAAACTTCCTCAAG 58.699 41.667 0.00 0.00 35.50 3.02
2842 3004 5.070446 TCTCAGCAGTTAAACTTCCTCAAGA 59.930 40.000 0.00 0.00 33.34 3.02
2843 3005 5.869579 TCAGCAGTTAAACTTCCTCAAGAT 58.130 37.500 0.00 0.00 33.34 2.40
2844 3006 6.299141 TCAGCAGTTAAACTTCCTCAAGATT 58.701 36.000 0.00 0.00 33.34 2.40
2845 3007 6.772716 TCAGCAGTTAAACTTCCTCAAGATTT 59.227 34.615 0.00 0.00 33.34 2.17
2846 3008 7.285401 TCAGCAGTTAAACTTCCTCAAGATTTT 59.715 33.333 0.00 0.00 33.34 1.82
2847 3009 7.380602 CAGCAGTTAAACTTCCTCAAGATTTTG 59.619 37.037 0.00 0.00 33.34 2.44
2848 3010 7.285401 AGCAGTTAAACTTCCTCAAGATTTTGA 59.715 33.333 0.00 0.00 40.92 2.69
2849 3011 7.379797 GCAGTTAAACTTCCTCAAGATTTTGAC 59.620 37.037 0.00 0.00 38.37 3.18
2850 3012 8.624776 CAGTTAAACTTCCTCAAGATTTTGACT 58.375 33.333 0.00 0.00 38.37 3.41
2851 3013 8.624776 AGTTAAACTTCCTCAAGATTTTGACTG 58.375 33.333 0.00 0.00 38.37 3.51
2852 3014 8.406297 GTTAAACTTCCTCAAGATTTTGACTGT 58.594 33.333 0.00 0.00 38.37 3.55
2853 3015 6.625873 AACTTCCTCAAGATTTTGACTGTC 57.374 37.500 0.00 0.00 38.37 3.51
2854 3016 5.934781 ACTTCCTCAAGATTTTGACTGTCT 58.065 37.500 9.51 0.00 38.37 3.41
2855 3017 7.067496 ACTTCCTCAAGATTTTGACTGTCTA 57.933 36.000 9.51 0.00 38.37 2.59
2856 3018 7.684529 ACTTCCTCAAGATTTTGACTGTCTAT 58.315 34.615 9.51 0.24 38.37 1.98
2857 3019 8.160106 ACTTCCTCAAGATTTTGACTGTCTATT 58.840 33.333 9.51 0.00 38.37 1.73
2858 3020 7.912056 TCCTCAAGATTTTGACTGTCTATTG 57.088 36.000 9.51 2.93 38.37 1.90
2859 3021 6.881065 TCCTCAAGATTTTGACTGTCTATTGG 59.119 38.462 9.51 0.00 38.37 3.16
2860 3022 6.094603 CCTCAAGATTTTGACTGTCTATTGGG 59.905 42.308 9.51 2.57 38.37 4.12
2861 3023 6.778821 TCAAGATTTTGACTGTCTATTGGGA 58.221 36.000 9.51 0.00 38.37 4.37
2862 3024 6.881065 TCAAGATTTTGACTGTCTATTGGGAG 59.119 38.462 9.51 0.00 38.37 4.30
2863 3025 6.627087 AGATTTTGACTGTCTATTGGGAGA 57.373 37.500 9.51 0.00 0.00 3.71
2864 3026 7.205515 AGATTTTGACTGTCTATTGGGAGAT 57.794 36.000 9.51 0.00 0.00 2.75
2865 3027 7.052873 AGATTTTGACTGTCTATTGGGAGATG 58.947 38.462 9.51 0.00 0.00 2.90
2866 3028 5.762179 TTTGACTGTCTATTGGGAGATGT 57.238 39.130 9.51 0.00 0.00 3.06
2867 3029 5.762179 TTGACTGTCTATTGGGAGATGTT 57.238 39.130 9.51 0.00 0.00 2.71
2868 3030 5.089970 TGACTGTCTATTGGGAGATGTTG 57.910 43.478 9.51 0.00 0.00 3.33
2869 3031 4.080919 TGACTGTCTATTGGGAGATGTTGG 60.081 45.833 9.51 0.00 0.00 3.77
2870 3032 4.104086 ACTGTCTATTGGGAGATGTTGGA 58.896 43.478 0.00 0.00 0.00 3.53
2871 3033 4.080863 ACTGTCTATTGGGAGATGTTGGAC 60.081 45.833 0.00 0.00 0.00 4.02
2872 3034 4.104086 TGTCTATTGGGAGATGTTGGACT 58.896 43.478 0.00 0.00 0.00 3.85
2873 3035 4.080919 TGTCTATTGGGAGATGTTGGACTG 60.081 45.833 0.00 0.00 0.00 3.51
2874 3036 4.162320 GTCTATTGGGAGATGTTGGACTGA 59.838 45.833 0.00 0.00 0.00 3.41
2875 3037 4.782691 TCTATTGGGAGATGTTGGACTGAA 59.217 41.667 0.00 0.00 0.00 3.02
2876 3038 3.874383 TTGGGAGATGTTGGACTGAAA 57.126 42.857 0.00 0.00 0.00 2.69
2877 3039 3.874383 TGGGAGATGTTGGACTGAAAA 57.126 42.857 0.00 0.00 0.00 2.29
2878 3040 3.754965 TGGGAGATGTTGGACTGAAAAG 58.245 45.455 0.00 0.00 0.00 2.27
2879 3041 2.489722 GGGAGATGTTGGACTGAAAAGC 59.510 50.000 0.00 0.00 0.00 3.51
2880 3042 3.149196 GGAGATGTTGGACTGAAAAGCA 58.851 45.455 0.00 0.00 0.00 3.91
2881 3043 3.569701 GGAGATGTTGGACTGAAAAGCAA 59.430 43.478 0.00 0.00 0.00 3.91
2882 3044 4.320788 GGAGATGTTGGACTGAAAAGCAAG 60.321 45.833 0.00 0.00 0.00 4.01
2883 3045 4.464008 AGATGTTGGACTGAAAAGCAAGA 58.536 39.130 0.00 0.00 0.00 3.02
2884 3046 4.518211 AGATGTTGGACTGAAAAGCAAGAG 59.482 41.667 0.00 0.00 0.00 2.85
2885 3047 2.951642 TGTTGGACTGAAAAGCAAGAGG 59.048 45.455 0.00 0.00 0.00 3.69
2886 3048 2.276732 TGGACTGAAAAGCAAGAGGG 57.723 50.000 0.00 0.00 0.00 4.30
2887 3049 1.202927 TGGACTGAAAAGCAAGAGGGG 60.203 52.381 0.00 0.00 0.00 4.79
2888 3050 1.073923 GGACTGAAAAGCAAGAGGGGA 59.926 52.381 0.00 0.00 0.00 4.81
2889 3051 2.291217 GGACTGAAAAGCAAGAGGGGAT 60.291 50.000 0.00 0.00 0.00 3.85
2890 3052 3.425659 GACTGAAAAGCAAGAGGGGATT 58.574 45.455 0.00 0.00 0.00 3.01
2891 3053 4.567747 GGACTGAAAAGCAAGAGGGGATTA 60.568 45.833 0.00 0.00 0.00 1.75
2892 3054 4.998051 ACTGAAAAGCAAGAGGGGATTAA 58.002 39.130 0.00 0.00 0.00 1.40
2893 3055 5.393866 ACTGAAAAGCAAGAGGGGATTAAA 58.606 37.500 0.00 0.00 0.00 1.52
2894 3056 6.019108 ACTGAAAAGCAAGAGGGGATTAAAT 58.981 36.000 0.00 0.00 0.00 1.40
2895 3057 6.153510 ACTGAAAAGCAAGAGGGGATTAAATC 59.846 38.462 0.00 0.00 0.00 2.17
2896 3058 6.256053 TGAAAAGCAAGAGGGGATTAAATCT 58.744 36.000 0.00 0.00 0.00 2.40
2897 3059 6.378280 TGAAAAGCAAGAGGGGATTAAATCTC 59.622 38.462 0.00 0.00 0.00 2.75
2898 3060 5.456921 AAGCAAGAGGGGATTAAATCTCA 57.543 39.130 0.00 0.00 0.00 3.27
2899 3061 5.456921 AGCAAGAGGGGATTAAATCTCAA 57.543 39.130 0.00 0.00 0.00 3.02
2900 3062 5.444176 AGCAAGAGGGGATTAAATCTCAAG 58.556 41.667 0.00 0.00 0.00 3.02
2901 3063 5.044550 AGCAAGAGGGGATTAAATCTCAAGT 60.045 40.000 0.00 0.00 0.00 3.16
2902 3064 5.067023 GCAAGAGGGGATTAAATCTCAAGTG 59.933 44.000 0.00 0.00 0.00 3.16
2903 3065 5.379706 AGAGGGGATTAAATCTCAAGTGG 57.620 43.478 0.00 0.00 0.00 4.00
2904 3066 4.790790 AGAGGGGATTAAATCTCAAGTGGT 59.209 41.667 0.00 0.00 0.00 4.16
2905 3067 5.254032 AGAGGGGATTAAATCTCAAGTGGTT 59.746 40.000 0.00 0.00 0.00 3.67
2906 3068 5.903923 AGGGGATTAAATCTCAAGTGGTTT 58.096 37.500 0.00 0.00 0.00 3.27
2907 3069 5.716703 AGGGGATTAAATCTCAAGTGGTTTG 59.283 40.000 0.00 0.00 38.17 2.93
2908 3070 5.714806 GGGGATTAAATCTCAAGTGGTTTGA 59.285 40.000 0.00 0.00 43.40 2.69
2909 3071 6.381133 GGGGATTAAATCTCAAGTGGTTTGAT 59.619 38.462 0.00 0.00 44.48 2.57
2910 3072 7.093333 GGGGATTAAATCTCAAGTGGTTTGATT 60.093 37.037 0.00 0.00 44.48 2.57
2911 3073 7.761249 GGGATTAAATCTCAAGTGGTTTGATTG 59.239 37.037 0.00 0.00 44.48 2.67
2912 3074 7.761249 GGATTAAATCTCAAGTGGTTTGATTGG 59.239 37.037 0.00 0.00 44.48 3.16
2913 3075 7.831691 TTAAATCTCAAGTGGTTTGATTGGA 57.168 32.000 0.00 0.00 44.48 3.53
2914 3076 6.923199 AAATCTCAAGTGGTTTGATTGGAT 57.077 33.333 0.00 0.00 44.48 3.41
2915 3077 5.909621 ATCTCAAGTGGTTTGATTGGATG 57.090 39.130 0.00 0.00 44.48 3.51
2916 3078 4.081406 TCTCAAGTGGTTTGATTGGATGG 58.919 43.478 0.00 0.00 44.48 3.51
2917 3079 3.828451 CTCAAGTGGTTTGATTGGATGGT 59.172 43.478 0.00 0.00 44.48 3.55
2918 3080 4.222336 TCAAGTGGTTTGATTGGATGGTT 58.778 39.130 0.00 0.00 40.82 3.67
2919 3081 4.039004 TCAAGTGGTTTGATTGGATGGTTG 59.961 41.667 0.00 0.00 40.82 3.77
2920 3082 2.899256 AGTGGTTTGATTGGATGGTTGG 59.101 45.455 0.00 0.00 0.00 3.77
2921 3083 2.896685 GTGGTTTGATTGGATGGTTGGA 59.103 45.455 0.00 0.00 0.00 3.53
2922 3084 2.896685 TGGTTTGATTGGATGGTTGGAC 59.103 45.455 0.00 0.00 0.00 4.02
2923 3085 3.165071 GGTTTGATTGGATGGTTGGACT 58.835 45.455 0.00 0.00 0.00 3.85
2924 3086 4.202620 TGGTTTGATTGGATGGTTGGACTA 60.203 41.667 0.00 0.00 0.00 2.59
2925 3087 4.157840 GGTTTGATTGGATGGTTGGACTAC 59.842 45.833 0.00 0.00 0.00 2.73
2926 3088 4.649267 TTGATTGGATGGTTGGACTACA 57.351 40.909 0.00 0.00 0.00 2.74
2927 3089 4.649267 TGATTGGATGGTTGGACTACAA 57.351 40.909 0.00 0.00 36.54 2.41
2928 3090 4.991776 TGATTGGATGGTTGGACTACAAA 58.008 39.130 0.00 0.00 41.58 2.83
2929 3091 5.009631 TGATTGGATGGTTGGACTACAAAG 58.990 41.667 0.00 0.00 41.58 2.77
2930 3092 2.790433 TGGATGGTTGGACTACAAAGC 58.210 47.619 0.00 0.00 41.58 3.51
2931 3093 2.092323 GGATGGTTGGACTACAAAGCC 58.908 52.381 0.00 0.00 41.58 4.35
2932 3094 2.290960 GGATGGTTGGACTACAAAGCCT 60.291 50.000 0.00 0.00 41.58 4.58
2933 3095 3.421844 GATGGTTGGACTACAAAGCCTT 58.578 45.455 0.00 0.00 41.58 4.35
2934 3096 3.306472 TGGTTGGACTACAAAGCCTTT 57.694 42.857 0.00 0.00 41.58 3.11
2935 3097 3.637769 TGGTTGGACTACAAAGCCTTTT 58.362 40.909 0.00 0.00 41.58 2.27
2937 3099 3.634910 GGTTGGACTACAAAGCCTTTTGA 59.365 43.478 5.51 0.00 45.21 2.69
2938 3100 4.098807 GGTTGGACTACAAAGCCTTTTGAA 59.901 41.667 5.51 0.00 45.21 2.69
2939 3101 5.394773 GGTTGGACTACAAAGCCTTTTGAAA 60.395 40.000 5.51 0.00 45.21 2.69
2940 3102 6.280643 GTTGGACTACAAAGCCTTTTGAAAT 58.719 36.000 5.51 0.00 45.21 2.17
2941 3103 6.084326 TGGACTACAAAGCCTTTTGAAATC 57.916 37.500 5.51 0.56 45.21 2.17
2942 3104 5.596361 TGGACTACAAAGCCTTTTGAAATCA 59.404 36.000 5.51 0.00 45.21 2.57
2943 3105 6.152379 GGACTACAAAGCCTTTTGAAATCAG 58.848 40.000 5.51 0.00 45.21 2.90
2944 3106 6.239036 GGACTACAAAGCCTTTTGAAATCAGT 60.239 38.462 5.51 1.55 45.21 3.41
2945 3107 7.040686 GGACTACAAAGCCTTTTGAAATCAGTA 60.041 37.037 5.51 0.00 45.21 2.74
2946 3108 8.409358 ACTACAAAGCCTTTTGAAATCAGTAT 57.591 30.769 5.51 0.00 45.21 2.12
2947 3109 8.860088 ACTACAAAGCCTTTTGAAATCAGTATT 58.140 29.630 5.51 0.00 45.21 1.89
2950 3112 9.077885 ACAAAGCCTTTTGAAATCAGTATTAGA 57.922 29.630 5.51 0.00 45.21 2.10
2951 3113 9.912634 CAAAGCCTTTTGAAATCAGTATTAGAA 57.087 29.630 0.00 0.00 45.21 2.10
2953 3115 8.286191 AGCCTTTTGAAATCAGTATTAGAAGG 57.714 34.615 0.00 0.00 0.00 3.46
2954 3116 7.890655 AGCCTTTTGAAATCAGTATTAGAAGGT 59.109 33.333 0.00 0.00 0.00 3.50
2955 3117 7.970614 GCCTTTTGAAATCAGTATTAGAAGGTG 59.029 37.037 0.00 0.00 0.00 4.00
2956 3118 8.462016 CCTTTTGAAATCAGTATTAGAAGGTGG 58.538 37.037 0.00 0.00 0.00 4.61
2957 3119 9.231297 CTTTTGAAATCAGTATTAGAAGGTGGA 57.769 33.333 0.00 0.00 0.00 4.02
2958 3120 8.792830 TTTGAAATCAGTATTAGAAGGTGGAG 57.207 34.615 0.00 0.00 0.00 3.86
2959 3121 7.496346 TGAAATCAGTATTAGAAGGTGGAGT 57.504 36.000 0.00 0.00 0.00 3.85
2960 3122 7.918076 TGAAATCAGTATTAGAAGGTGGAGTT 58.082 34.615 0.00 0.00 0.00 3.01
2961 3123 8.041323 TGAAATCAGTATTAGAAGGTGGAGTTC 58.959 37.037 0.00 0.00 0.00 3.01
2962 3124 7.741554 AATCAGTATTAGAAGGTGGAGTTCT 57.258 36.000 0.00 0.00 37.94 3.01
2963 3125 6.777213 TCAGTATTAGAAGGTGGAGTTCTC 57.223 41.667 0.00 0.00 35.78 2.87
2964 3126 6.494952 TCAGTATTAGAAGGTGGAGTTCTCT 58.505 40.000 0.00 0.00 35.78 3.10
2965 3127 6.603997 TCAGTATTAGAAGGTGGAGTTCTCTC 59.396 42.308 0.00 0.00 35.78 3.20
2966 3128 6.605594 CAGTATTAGAAGGTGGAGTTCTCTCT 59.394 42.308 0.00 0.00 40.29 3.10
2967 3129 7.123547 CAGTATTAGAAGGTGGAGTTCTCTCTT 59.876 40.741 0.00 2.62 40.29 2.85
2968 3130 5.730296 TTAGAAGGTGGAGTTCTCTCTTG 57.270 43.478 0.00 0.00 40.29 3.02
2969 3131 2.903135 AGAAGGTGGAGTTCTCTCTTGG 59.097 50.000 0.00 0.00 40.29 3.61
2970 3132 2.704190 AGGTGGAGTTCTCTCTTGGA 57.296 50.000 0.00 0.00 40.29 3.53
2971 3133 2.977808 AGGTGGAGTTCTCTCTTGGAA 58.022 47.619 0.00 0.00 40.29 3.53
2972 3134 2.635427 AGGTGGAGTTCTCTCTTGGAAC 59.365 50.000 0.00 0.00 42.15 3.62
2973 3135 2.368875 GGTGGAGTTCTCTCTTGGAACA 59.631 50.000 8.86 0.00 43.67 3.18
2974 3136 3.008485 GGTGGAGTTCTCTCTTGGAACAT 59.992 47.826 8.86 0.00 43.67 2.71
2975 3137 4.223032 GGTGGAGTTCTCTCTTGGAACATA 59.777 45.833 8.86 0.00 43.67 2.29
2976 3138 5.104735 GGTGGAGTTCTCTCTTGGAACATAT 60.105 44.000 8.86 0.00 43.67 1.78
2977 3139 5.814705 GTGGAGTTCTCTCTTGGAACATATG 59.185 44.000 0.00 0.00 43.67 1.78
2978 3140 5.721480 TGGAGTTCTCTCTTGGAACATATGA 59.279 40.000 10.38 0.00 43.67 2.15
2979 3141 6.385176 TGGAGTTCTCTCTTGGAACATATGAT 59.615 38.462 10.38 0.00 43.67 2.45
2980 3142 6.705381 GGAGTTCTCTCTTGGAACATATGATG 59.295 42.308 10.38 0.00 43.67 3.07
2981 3143 6.590068 AGTTCTCTCTTGGAACATATGATGG 58.410 40.000 10.38 0.00 43.67 3.51
2982 3144 5.557576 TCTCTCTTGGAACATATGATGGG 57.442 43.478 10.38 0.00 39.30 4.00
2983 3145 5.218959 TCTCTCTTGGAACATATGATGGGA 58.781 41.667 10.38 0.00 39.30 4.37
2984 3146 5.306419 TCTCTCTTGGAACATATGATGGGAG 59.694 44.000 10.38 4.36 39.30 4.30
2985 3147 4.971282 TCTCTTGGAACATATGATGGGAGT 59.029 41.667 10.38 0.00 39.30 3.85
2986 3148 5.039920 TCTTGGAACATATGATGGGAGTG 57.960 43.478 10.38 0.00 39.30 3.51
2987 3149 4.721274 TCTTGGAACATATGATGGGAGTGA 59.279 41.667 10.38 0.00 39.30 3.41
2988 3150 5.191522 TCTTGGAACATATGATGGGAGTGAA 59.808 40.000 10.38 0.00 39.30 3.18
2989 3151 5.651612 TGGAACATATGATGGGAGTGAAT 57.348 39.130 10.38 0.00 33.60 2.57
2990 3152 6.017211 TGGAACATATGATGGGAGTGAATT 57.983 37.500 10.38 0.00 33.60 2.17
2991 3153 6.434302 TGGAACATATGATGGGAGTGAATTT 58.566 36.000 10.38 0.00 33.60 1.82
2992 3154 6.896860 TGGAACATATGATGGGAGTGAATTTT 59.103 34.615 10.38 0.00 33.60 1.82
2993 3155 7.147863 TGGAACATATGATGGGAGTGAATTTTG 60.148 37.037 10.38 0.00 33.60 2.44
2994 3156 6.152932 ACATATGATGGGAGTGAATTTTGC 57.847 37.500 10.38 0.00 33.60 3.68
2995 3157 5.895534 ACATATGATGGGAGTGAATTTTGCT 59.104 36.000 10.38 0.00 33.60 3.91
2996 3158 6.381994 ACATATGATGGGAGTGAATTTTGCTT 59.618 34.615 10.38 0.00 33.60 3.91
2997 3159 4.789012 TGATGGGAGTGAATTTTGCTTC 57.211 40.909 0.00 0.00 0.00 3.86
2998 3160 3.191162 TGATGGGAGTGAATTTTGCTTCG 59.809 43.478 0.00 0.00 0.00 3.79
2999 3161 2.857483 TGGGAGTGAATTTTGCTTCGA 58.143 42.857 0.00 0.00 0.00 3.71
3000 3162 2.813754 TGGGAGTGAATTTTGCTTCGAG 59.186 45.455 0.00 0.00 0.00 4.04
3001 3163 2.814336 GGGAGTGAATTTTGCTTCGAGT 59.186 45.455 0.00 0.00 0.00 4.18
3002 3164 3.253432 GGGAGTGAATTTTGCTTCGAGTT 59.747 43.478 0.00 0.00 0.00 3.01
3003 3165 4.454504 GGGAGTGAATTTTGCTTCGAGTTA 59.545 41.667 0.00 0.00 0.00 2.24
3004 3166 5.390991 GGGAGTGAATTTTGCTTCGAGTTAG 60.391 44.000 0.00 0.00 0.00 2.34
3005 3167 5.408604 GGAGTGAATTTTGCTTCGAGTTAGA 59.591 40.000 0.00 0.00 0.00 2.10
3006 3168 6.229561 AGTGAATTTTGCTTCGAGTTAGAC 57.770 37.500 0.00 0.00 0.00 2.59
3007 3169 5.992217 AGTGAATTTTGCTTCGAGTTAGACT 59.008 36.000 0.00 0.00 0.00 3.24
3008 3170 7.152645 AGTGAATTTTGCTTCGAGTTAGACTA 58.847 34.615 0.00 0.00 0.00 2.59
3009 3171 7.329717 AGTGAATTTTGCTTCGAGTTAGACTAG 59.670 37.037 0.00 0.00 0.00 2.57
3010 3172 7.116519 GTGAATTTTGCTTCGAGTTAGACTAGT 59.883 37.037 0.00 0.00 0.00 2.57
3011 3173 6.952935 ATTTTGCTTCGAGTTAGACTAGTG 57.047 37.500 0.00 0.00 0.00 2.74
3012 3174 4.436242 TTGCTTCGAGTTAGACTAGTGG 57.564 45.455 0.00 0.00 0.00 4.00
3013 3175 2.753452 TGCTTCGAGTTAGACTAGTGGG 59.247 50.000 0.00 0.00 0.00 4.61
3014 3176 3.015327 GCTTCGAGTTAGACTAGTGGGA 58.985 50.000 0.00 0.00 0.00 4.37
3015 3177 3.633065 GCTTCGAGTTAGACTAGTGGGAT 59.367 47.826 0.00 0.00 0.00 3.85
3016 3178 4.820716 GCTTCGAGTTAGACTAGTGGGATA 59.179 45.833 0.00 0.00 0.00 2.59
3017 3179 5.298777 GCTTCGAGTTAGACTAGTGGGATAA 59.701 44.000 0.00 0.00 0.00 1.75
3018 3180 6.513720 GCTTCGAGTTAGACTAGTGGGATAAG 60.514 46.154 0.00 0.00 0.00 1.73
3019 3181 5.999044 TCGAGTTAGACTAGTGGGATAAGT 58.001 41.667 0.00 0.00 0.00 2.24
3020 3182 5.821470 TCGAGTTAGACTAGTGGGATAAGTG 59.179 44.000 0.00 0.00 0.00 3.16
3021 3183 5.008811 CGAGTTAGACTAGTGGGATAAGTGG 59.991 48.000 0.00 0.00 0.00 4.00
3022 3184 5.209659 AGTTAGACTAGTGGGATAAGTGGG 58.790 45.833 0.00 0.00 0.00 4.61
3023 3185 3.047695 AGACTAGTGGGATAAGTGGGG 57.952 52.381 0.00 0.00 0.00 4.96
3024 3186 2.318207 AGACTAGTGGGATAAGTGGGGT 59.682 50.000 0.00 0.00 0.00 4.95
3025 3187 3.534747 AGACTAGTGGGATAAGTGGGGTA 59.465 47.826 0.00 0.00 0.00 3.69
3026 3188 4.172241 AGACTAGTGGGATAAGTGGGGTAT 59.828 45.833 0.00 0.00 0.00 2.73
3027 3189 5.377769 AGACTAGTGGGATAAGTGGGGTATA 59.622 44.000 0.00 0.00 0.00 1.47
3028 3190 6.048080 AGACTAGTGGGATAAGTGGGGTATAT 59.952 42.308 0.00 0.00 0.00 0.86
3029 3191 7.243381 AGACTAGTGGGATAAGTGGGGTATATA 59.757 40.741 0.00 0.00 0.00 0.86
3030 3192 7.963060 ACTAGTGGGATAAGTGGGGTATATAT 58.037 38.462 0.00 0.00 0.00 0.86
3031 3193 9.088342 ACTAGTGGGATAAGTGGGGTATATATA 57.912 37.037 0.00 0.00 0.00 0.86
3032 3194 9.589461 CTAGTGGGATAAGTGGGGTATATATAG 57.411 40.741 0.00 0.00 0.00 1.31
3033 3195 7.371043 AGTGGGATAAGTGGGGTATATATAGG 58.629 42.308 0.00 0.00 0.00 2.57
3034 3196 6.557633 GTGGGATAAGTGGGGTATATATAGGG 59.442 46.154 0.00 0.00 0.00 3.53
3035 3197 6.225278 TGGGATAAGTGGGGTATATATAGGGT 59.775 42.308 0.00 0.00 0.00 4.34
3036 3198 6.557633 GGGATAAGTGGGGTATATATAGGGTG 59.442 46.154 0.00 0.00 0.00 4.61
3037 3199 6.557633 GGATAAGTGGGGTATATATAGGGTGG 59.442 46.154 0.00 0.00 0.00 4.61
3038 3200 5.643465 AAGTGGGGTATATATAGGGTGGA 57.357 43.478 0.00 0.00 0.00 4.02
3039 3201 4.956582 AGTGGGGTATATATAGGGTGGAC 58.043 47.826 0.00 0.00 0.00 4.02
3040 3202 4.615654 AGTGGGGTATATATAGGGTGGACT 59.384 45.833 0.00 0.00 0.00 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.548875 CTCGCTTGAGGAGGAAGATTG 58.451 52.381 0.00 0.00 36.01 2.67
1 2 1.134551 GCTCGCTTGAGGAGGAAGATT 60.135 52.381 0.00 0.00 40.26 2.40
2 3 0.463620 GCTCGCTTGAGGAGGAAGAT 59.536 55.000 0.00 0.00 40.26 2.40
3 4 1.893786 GCTCGCTTGAGGAGGAAGA 59.106 57.895 0.00 0.00 40.26 2.87
4 5 1.518133 CGCTCGCTTGAGGAGGAAG 60.518 63.158 0.00 0.00 40.26 3.46
52 92 0.450983 GGGTGAAGAGACCGAGTACG 59.549 60.000 0.00 0.00 36.80 3.67
55 95 1.536943 GCAGGGTGAAGAGACCGAGT 61.537 60.000 0.00 0.00 36.80 4.18
229 297 5.184864 AGTTGACCGGCATTGAATTTGATTA 59.815 36.000 0.00 0.00 0.00 1.75
294 362 6.231211 AGTACTTCCACCTTATGAACACAAG 58.769 40.000 0.00 0.00 0.00 3.16
344 412 9.788960 GGAGTTTAGTCTTATGCAAATTTTAGG 57.211 33.333 0.00 0.00 0.00 2.69
346 414 8.745590 GGGGAGTTTAGTCTTATGCAAATTTTA 58.254 33.333 0.00 0.00 0.00 1.52
347 415 7.454694 AGGGGAGTTTAGTCTTATGCAAATTTT 59.545 33.333 0.00 0.00 0.00 1.82
351 450 5.013704 TCAGGGGAGTTTAGTCTTATGCAAA 59.986 40.000 0.00 0.00 0.00 3.68
356 455 7.844779 TGTAATCTCAGGGGAGTTTAGTCTTAT 59.155 37.037 0.00 0.00 42.05 1.73
361 460 5.342866 AGTGTAATCTCAGGGGAGTTTAGT 58.657 41.667 0.00 0.00 42.05 2.24
362 461 5.941555 AGTGTAATCTCAGGGGAGTTTAG 57.058 43.478 0.00 0.00 42.05 1.85
366 465 3.301274 GCTAGTGTAATCTCAGGGGAGT 58.699 50.000 0.00 0.00 42.05 3.85
367 466 2.294791 CGCTAGTGTAATCTCAGGGGAG 59.705 54.545 0.00 0.00 42.80 4.30
368 467 2.092049 TCGCTAGTGTAATCTCAGGGGA 60.092 50.000 2.66 0.00 0.00 4.81
369 468 2.294791 CTCGCTAGTGTAATCTCAGGGG 59.705 54.545 2.66 0.00 0.00 4.79
370 469 2.294791 CCTCGCTAGTGTAATCTCAGGG 59.705 54.545 2.66 0.00 0.00 4.45
374 473 5.067544 ACCTTTACCTCGCTAGTGTAATCTC 59.932 44.000 2.66 0.00 0.00 2.75
384 483 2.522185 ACTCACACCTTTACCTCGCTA 58.478 47.619 0.00 0.00 0.00 4.26
385 484 1.339097 ACTCACACCTTTACCTCGCT 58.661 50.000 0.00 0.00 0.00 4.93
403 502 5.890334 TCTTTGTCTCAATGTTTCACCAAC 58.110 37.500 0.00 0.00 35.71 3.77
404 503 5.450412 GCTCTTTGTCTCAATGTTTCACCAA 60.450 40.000 0.00 0.00 0.00 3.67
412 511 2.373169 TCCCAGCTCTTTGTCTCAATGT 59.627 45.455 0.00 0.00 0.00 2.71
424 523 3.054065 CCTTAAATTCCAGTCCCAGCTCT 60.054 47.826 0.00 0.00 0.00 4.09
425 524 3.054361 TCCTTAAATTCCAGTCCCAGCTC 60.054 47.826 0.00 0.00 0.00 4.09
450 555 8.984891 ATTCGCAAAACAAAATTGATCTGATA 57.015 26.923 0.00 0.00 0.00 2.15
458 563 4.595116 TGGCAATTCGCAAAACAAAATTG 58.405 34.783 0.00 0.00 45.17 2.32
505 611 1.871676 CACTCATGCATCCCGATTCAG 59.128 52.381 0.00 0.00 0.00 3.02
540 655 6.824958 ATTAAGCCACTCCTCCAAATACTA 57.175 37.500 0.00 0.00 0.00 1.82
588 703 0.028505 GGACATGTAGCTGCATTGCG 59.971 55.000 15.26 6.81 38.13 4.85
609 724 2.304470 TCCATGTCAAGATCACGGGAAA 59.696 45.455 0.00 0.00 0.00 3.13
614 729 1.134580 AGGCTCCATGTCAAGATCACG 60.135 52.381 0.00 0.00 0.00 4.35
634 749 4.365514 AGAACAGTCTCTCTCACTCTCA 57.634 45.455 0.00 0.00 0.00 3.27
640 755 3.967326 TGGGAAAAGAACAGTCTCTCTCA 59.033 43.478 0.00 0.00 30.70 3.27
641 756 4.608948 TGGGAAAAGAACAGTCTCTCTC 57.391 45.455 0.00 0.00 30.70 3.20
642 757 5.126779 GTTTGGGAAAAGAACAGTCTCTCT 58.873 41.667 0.00 0.00 30.70 3.10
643 758 4.276183 GGTTTGGGAAAAGAACAGTCTCTC 59.724 45.833 0.00 0.00 30.70 3.20
644 759 4.207955 GGTTTGGGAAAAGAACAGTCTCT 58.792 43.478 0.00 0.00 30.70 3.10
645 760 3.951680 TGGTTTGGGAAAAGAACAGTCTC 59.048 43.478 0.00 0.00 30.70 3.36
659 774 0.885596 TTAGCGTTCGGTGGTTTGGG 60.886 55.000 7.16 0.00 0.00 4.12
664 779 1.666054 TTTGTTTAGCGTTCGGTGGT 58.334 45.000 7.16 0.00 0.00 4.16
691 818 1.066136 GGTCGCGTCACCTTTAGTTC 58.934 55.000 5.77 0.00 33.08 3.01
693 820 0.319297 GTGGTCGCGTCACCTTTAGT 60.319 55.000 16.89 0.00 37.34 2.24
706 839 4.428615 AAACATAAAATTCCGGTGGTCG 57.571 40.909 0.00 0.00 38.88 4.79
749 882 5.163982 GCCTACGTACTCTTTTGCTTAGTTG 60.164 44.000 0.00 0.00 0.00 3.16
759 892 1.922570 CGCATGCCTACGTACTCTTT 58.077 50.000 13.15 0.00 0.00 2.52
800 934 0.609681 GGAGGAGACCGTCACTGTCT 60.610 60.000 0.76 0.76 45.47 3.41
842 980 2.226437 AGCCTGCACGTAGATTTTGTTG 59.774 45.455 0.00 0.00 0.00 3.33
932 1075 1.080501 CGTGCAGGCTCGAGAAGAA 60.081 57.895 18.75 0.00 35.30 2.52
1056 1205 1.817520 CGTGGCGCCCATCACAATA 60.818 57.895 26.77 0.00 35.28 1.90
1121 1270 3.264866 GAGTTGACGACCTCGCCGT 62.265 63.158 0.00 0.00 44.43 5.68
1167 1316 2.892334 CTTGTTGGTGACCACGGCG 61.892 63.158 2.46 4.80 30.78 6.46
1644 1793 3.320826 TGTTCTCCTTGATCTGTTCGACA 59.679 43.478 0.00 0.00 0.00 4.35
1650 1799 3.244665 TGCATGTGTTCTCCTTGATCTGT 60.245 43.478 0.00 0.00 0.00 3.41
1651 1800 3.340928 TGCATGTGTTCTCCTTGATCTG 58.659 45.455 0.00 0.00 0.00 2.90
1782 1931 1.153745 CTCCGCTTCCTCGTCCTTG 60.154 63.158 0.00 0.00 0.00 3.61
1895 2044 1.039785 GCTTTGCTCCTTCCCATCCC 61.040 60.000 0.00 0.00 0.00 3.85
2001 2153 1.149174 CCTTGGATGGATCCCACGG 59.851 63.158 9.90 3.40 46.59 4.94
2010 2162 1.039233 ATGCCGCTTTCCTTGGATGG 61.039 55.000 0.00 0.00 0.00 3.51
2029 2181 1.949525 GCTCCAAACTCAAACTGCTGA 59.050 47.619 0.00 0.00 0.00 4.26
2045 2197 6.705863 ATGGTTAATTTGATGAGAAGCTCC 57.294 37.500 0.00 0.00 0.00 4.70
2111 2263 8.903059 AATATGTGGTATGGTTTCCCTAAAAA 57.097 30.769 0.00 0.00 0.00 1.94
2112 2264 8.754080 CAAATATGTGGTATGGTTTCCCTAAAA 58.246 33.333 0.00 0.00 0.00 1.52
2113 2265 7.343316 CCAAATATGTGGTATGGTTTCCCTAAA 59.657 37.037 3.43 0.00 33.63 1.85
2114 2266 6.836527 CCAAATATGTGGTATGGTTTCCCTAA 59.163 38.462 3.43 0.00 33.63 2.69
2115 2267 6.369629 CCAAATATGTGGTATGGTTTCCCTA 58.630 40.000 3.43 0.00 33.63 3.53
2116 2268 5.208121 CCAAATATGTGGTATGGTTTCCCT 58.792 41.667 3.43 0.00 33.63 4.20
2117 2269 5.529581 CCAAATATGTGGTATGGTTTCCC 57.470 43.478 3.43 0.00 33.63 3.97
2131 2283 8.648097 CGCAAGCTAATAGTAGTACCAAATATG 58.352 37.037 0.00 0.00 0.00 1.78
2138 2290 6.149807 AGAGATCGCAAGCTAATAGTAGTACC 59.850 42.308 0.00 0.00 37.18 3.34
2230 2382 8.408601 CAATATACAATGCACTAGGCTTTTCTT 58.591 33.333 0.00 0.00 45.15 2.52
2253 2405 4.532521 AGAGGGTGTAGTTTAGAGTGCAAT 59.467 41.667 0.00 0.00 0.00 3.56
2287 2439 7.119709 AGTTTAAACTGCCAAAACACCTTAT 57.880 32.000 19.94 0.00 37.98 1.73
2298 2450 3.967401 GGCGTTTTAGTTTAAACTGCCA 58.033 40.909 28.58 12.00 45.76 4.92
2337 2490 7.672239 GGGTATCACATCTACTATCTCCTTTCT 59.328 40.741 0.00 0.00 0.00 2.52
2343 2496 5.124138 CGTGGGGTATCACATCTACTATCTC 59.876 48.000 0.00 0.00 37.50 2.75
2346 2499 4.765856 GTCGTGGGGTATCACATCTACTAT 59.234 45.833 0.00 0.00 37.50 2.12
2347 2500 4.139786 GTCGTGGGGTATCACATCTACTA 58.860 47.826 0.00 0.00 37.50 1.82
2439 2592 5.551760 ACCATGCATTAGAAAAGTCTTCG 57.448 39.130 0.00 0.00 35.12 3.79
2455 2608 3.084039 TCCTCTCAACATTCAACCATGC 58.916 45.455 0.00 0.00 0.00 4.06
2545 2698 6.097981 TGTGGCAAATGCATATTAAGATCCAA 59.902 34.615 0.00 0.00 44.36 3.53
2575 2728 3.751175 CCTTCGTCCAAAAAGCATCACTA 59.249 43.478 0.00 0.00 0.00 2.74
2577 2730 2.351738 CCCTTCGTCCAAAAAGCATCAC 60.352 50.000 0.00 0.00 0.00 3.06
2578 2731 1.885887 CCCTTCGTCCAAAAAGCATCA 59.114 47.619 0.00 0.00 0.00 3.07
2590 2751 2.572284 CTCCGTGGACCCTTCGTC 59.428 66.667 0.00 0.00 41.15 4.20
2612 2773 6.271585 AGTCATGATGGAATAGGTTGGATT 57.728 37.500 0.00 0.00 0.00 3.01
2614 2775 5.715439 AAGTCATGATGGAATAGGTTGGA 57.285 39.130 0.00 0.00 0.00 3.53
2640 2801 2.873094 TGAGACTAGTCCTTCACGGA 57.127 50.000 19.38 0.00 40.30 4.69
2643 2804 4.957327 ACCCTAATGAGACTAGTCCTTCAC 59.043 45.833 19.38 6.91 0.00 3.18
2644 2805 5.208294 ACCCTAATGAGACTAGTCCTTCA 57.792 43.478 19.38 16.94 0.00 3.02
2654 2816 6.716934 TGTGAAGATCTACCCTAATGAGAC 57.283 41.667 0.00 0.00 0.00 3.36
2657 2819 7.496346 ACTTTGTGAAGATCTACCCTAATGA 57.504 36.000 0.00 0.00 36.69 2.57
2677 2839 2.500504 GGGTTCGGAGATCACCTACTTT 59.499 50.000 7.63 0.00 37.55 2.66
2687 2849 3.764218 ACGTCTATATGGGTTCGGAGAT 58.236 45.455 0.00 0.00 35.04 2.75
2692 2854 3.001939 GGCAAAACGTCTATATGGGTTCG 59.998 47.826 0.00 0.00 0.00 3.95
2693 2855 4.196971 AGGCAAAACGTCTATATGGGTTC 58.803 43.478 0.00 0.00 0.00 3.62
2694 2856 4.230745 AGGCAAAACGTCTATATGGGTT 57.769 40.909 0.00 0.00 0.00 4.11
2695 2857 3.926058 AGGCAAAACGTCTATATGGGT 57.074 42.857 0.00 0.00 0.00 4.51
2696 2858 4.451900 AGAAGGCAAAACGTCTATATGGG 58.548 43.478 0.00 0.00 0.00 4.00
2697 2859 5.584649 TGAAGAAGGCAAAACGTCTATATGG 59.415 40.000 0.00 0.00 0.00 2.74
2698 2860 6.092122 TGTGAAGAAGGCAAAACGTCTATATG 59.908 38.462 0.00 0.00 0.00 1.78
2699 2861 6.170506 TGTGAAGAAGGCAAAACGTCTATAT 58.829 36.000 0.00 0.00 0.00 0.86
2700 2862 5.543714 TGTGAAGAAGGCAAAACGTCTATA 58.456 37.500 0.00 0.00 0.00 1.31
2701 2863 4.385825 TGTGAAGAAGGCAAAACGTCTAT 58.614 39.130 0.00 0.00 0.00 1.98
2702 2864 3.799366 TGTGAAGAAGGCAAAACGTCTA 58.201 40.909 0.00 0.00 0.00 2.59
2703 2865 2.639065 TGTGAAGAAGGCAAAACGTCT 58.361 42.857 0.00 0.00 0.00 4.18
2704 2866 3.414549 TTGTGAAGAAGGCAAAACGTC 57.585 42.857 0.00 0.00 0.00 4.34
2705 2867 3.192633 AGTTTGTGAAGAAGGCAAAACGT 59.807 39.130 0.00 0.00 34.47 3.99
2706 2868 3.769536 AGTTTGTGAAGAAGGCAAAACG 58.230 40.909 0.00 0.00 34.47 3.60
2707 2869 5.167845 TCAAGTTTGTGAAGAAGGCAAAAC 58.832 37.500 0.00 0.00 34.47 2.43
2708 2870 5.398603 TCAAGTTTGTGAAGAAGGCAAAA 57.601 34.783 0.00 0.00 34.47 2.44
2709 2871 5.398603 TTCAAGTTTGTGAAGAAGGCAAA 57.601 34.783 0.00 0.00 32.56 3.68
2718 2880 4.229304 TGGAGGTCTTCAAGTTTGTGAA 57.771 40.909 0.00 0.00 36.15 3.18
2719 2881 3.924114 TGGAGGTCTTCAAGTTTGTGA 57.076 42.857 0.00 0.00 0.00 3.58
2720 2882 3.243201 GCTTGGAGGTCTTCAAGTTTGTG 60.243 47.826 17.46 0.00 41.56 3.33
2721 2883 2.952310 GCTTGGAGGTCTTCAAGTTTGT 59.048 45.455 17.46 0.00 41.56 2.83
2722 2884 2.951642 TGCTTGGAGGTCTTCAAGTTTG 59.048 45.455 17.46 0.00 41.56 2.93
2723 2885 2.952310 GTGCTTGGAGGTCTTCAAGTTT 59.048 45.455 17.46 0.00 41.56 2.66
2724 2886 2.092429 TGTGCTTGGAGGTCTTCAAGTT 60.092 45.455 17.46 0.00 41.56 2.66
2725 2887 1.490490 TGTGCTTGGAGGTCTTCAAGT 59.510 47.619 17.46 0.00 41.56 3.16
2726 2888 1.876156 GTGTGCTTGGAGGTCTTCAAG 59.124 52.381 13.28 13.28 42.19 3.02
2727 2889 1.476833 GGTGTGCTTGGAGGTCTTCAA 60.477 52.381 0.00 0.00 0.00 2.69
2728 2890 0.108585 GGTGTGCTTGGAGGTCTTCA 59.891 55.000 0.00 0.00 0.00 3.02
2729 2891 0.606673 GGGTGTGCTTGGAGGTCTTC 60.607 60.000 0.00 0.00 0.00 2.87
2730 2892 1.062488 AGGGTGTGCTTGGAGGTCTT 61.062 55.000 0.00 0.00 0.00 3.01
2731 2893 1.062488 AAGGGTGTGCTTGGAGGTCT 61.062 55.000 0.00 0.00 0.00 3.85
2732 2894 0.606673 GAAGGGTGTGCTTGGAGGTC 60.607 60.000 0.00 0.00 0.00 3.85
2733 2895 1.352622 TGAAGGGTGTGCTTGGAGGT 61.353 55.000 0.00 0.00 0.00 3.85
2734 2896 0.178992 TTGAAGGGTGTGCTTGGAGG 60.179 55.000 0.00 0.00 0.00 4.30
2735 2897 1.691196 TTTGAAGGGTGTGCTTGGAG 58.309 50.000 0.00 0.00 0.00 3.86
2736 2898 2.031120 CTTTTGAAGGGTGTGCTTGGA 58.969 47.619 0.00 0.00 0.00 3.53
2737 2899 1.756538 ACTTTTGAAGGGTGTGCTTGG 59.243 47.619 0.00 0.00 0.00 3.61
2738 2900 4.142271 TGTTACTTTTGAAGGGTGTGCTTG 60.142 41.667 0.00 0.00 0.00 4.01
2739 2901 4.020543 TGTTACTTTTGAAGGGTGTGCTT 58.979 39.130 0.00 0.00 0.00 3.91
2740 2902 3.626930 TGTTACTTTTGAAGGGTGTGCT 58.373 40.909 0.00 0.00 0.00 4.40
2741 2903 4.097286 TCTTGTTACTTTTGAAGGGTGTGC 59.903 41.667 0.00 0.00 0.00 4.57
2742 2904 5.828299 TCTTGTTACTTTTGAAGGGTGTG 57.172 39.130 0.00 0.00 0.00 3.82
2743 2905 5.301805 CCATCTTGTTACTTTTGAAGGGTGT 59.698 40.000 0.00 0.00 0.00 4.16
2744 2906 5.534654 TCCATCTTGTTACTTTTGAAGGGTG 59.465 40.000 0.00 0.00 0.00 4.61
2745 2907 5.701224 TCCATCTTGTTACTTTTGAAGGGT 58.299 37.500 0.00 0.00 0.00 4.34
2746 2908 6.209391 ACATCCATCTTGTTACTTTTGAAGGG 59.791 38.462 0.00 0.00 0.00 3.95
2747 2909 7.219484 ACATCCATCTTGTTACTTTTGAAGG 57.781 36.000 0.00 0.00 0.00 3.46
2748 2910 7.115378 GCAACATCCATCTTGTTACTTTTGAAG 59.885 37.037 0.00 0.00 35.61 3.02
2749 2911 6.922957 GCAACATCCATCTTGTTACTTTTGAA 59.077 34.615 0.00 0.00 35.61 2.69
2750 2912 6.265196 AGCAACATCCATCTTGTTACTTTTGA 59.735 34.615 0.00 0.00 35.61 2.69
2751 2913 6.449698 AGCAACATCCATCTTGTTACTTTTG 58.550 36.000 0.00 0.00 35.61 2.44
2752 2914 6.655078 AGCAACATCCATCTTGTTACTTTT 57.345 33.333 0.00 0.00 35.61 2.27
2753 2915 6.655078 AAGCAACATCCATCTTGTTACTTT 57.345 33.333 0.00 0.00 37.38 2.66
2754 2916 6.375455 CCTAAGCAACATCCATCTTGTTACTT 59.625 38.462 7.09 7.09 41.35 2.24
2755 2917 5.882557 CCTAAGCAACATCCATCTTGTTACT 59.117 40.000 0.00 0.00 35.61 2.24
2756 2918 5.648092 ACCTAAGCAACATCCATCTTGTTAC 59.352 40.000 0.00 0.00 35.61 2.50
2757 2919 5.815581 ACCTAAGCAACATCCATCTTGTTA 58.184 37.500 0.00 0.00 35.61 2.41
2758 2920 4.666512 ACCTAAGCAACATCCATCTTGTT 58.333 39.130 0.00 0.00 37.79 2.83
2759 2921 4.307032 ACCTAAGCAACATCCATCTTGT 57.693 40.909 0.00 0.00 0.00 3.16
2760 2922 6.543465 TCATTACCTAAGCAACATCCATCTTG 59.457 38.462 0.00 0.00 0.00 3.02
2761 2923 6.662755 TCATTACCTAAGCAACATCCATCTT 58.337 36.000 0.00 0.00 0.00 2.40
2762 2924 6.252599 TCATTACCTAAGCAACATCCATCT 57.747 37.500 0.00 0.00 0.00 2.90
2763 2925 6.942532 TTCATTACCTAAGCAACATCCATC 57.057 37.500 0.00 0.00 0.00 3.51
2764 2926 6.491403 GGATTCATTACCTAAGCAACATCCAT 59.509 38.462 0.00 0.00 0.00 3.41
2765 2927 5.827797 GGATTCATTACCTAAGCAACATCCA 59.172 40.000 0.00 0.00 0.00 3.41
2766 2928 5.241728 GGGATTCATTACCTAAGCAACATCC 59.758 44.000 0.00 0.00 0.00 3.51
2767 2929 6.064717 AGGGATTCATTACCTAAGCAACATC 58.935 40.000 0.00 0.00 31.53 3.06
2768 2930 6.018433 AGGGATTCATTACCTAAGCAACAT 57.982 37.500 0.00 0.00 31.53 2.71
2769 2931 5.450818 AGGGATTCATTACCTAAGCAACA 57.549 39.130 0.00 0.00 31.53 3.33
2770 2932 5.450550 GCAAGGGATTCATTACCTAAGCAAC 60.451 44.000 0.00 0.00 36.28 4.17
2771 2933 4.644685 GCAAGGGATTCATTACCTAAGCAA 59.355 41.667 0.00 0.00 36.28 3.91
2772 2934 4.079787 AGCAAGGGATTCATTACCTAAGCA 60.080 41.667 0.00 0.00 37.75 3.91
2773 2935 4.464947 AGCAAGGGATTCATTACCTAAGC 58.535 43.478 0.00 0.00 36.42 3.09
2774 2936 5.934781 AGAGCAAGGGATTCATTACCTAAG 58.065 41.667 0.00 0.00 33.37 2.18
2775 2937 5.975988 AGAGCAAGGGATTCATTACCTAA 57.024 39.130 0.00 0.00 33.37 2.69
2776 2938 5.191722 ACAAGAGCAAGGGATTCATTACCTA 59.808 40.000 0.00 0.00 33.37 3.08
2777 2939 4.018050 ACAAGAGCAAGGGATTCATTACCT 60.018 41.667 0.00 0.00 35.78 3.08
2778 2940 4.096984 CACAAGAGCAAGGGATTCATTACC 59.903 45.833 0.00 0.00 0.00 2.85
2779 2941 4.439289 GCACAAGAGCAAGGGATTCATTAC 60.439 45.833 0.00 0.00 0.00 1.89
2780 2942 3.696051 GCACAAGAGCAAGGGATTCATTA 59.304 43.478 0.00 0.00 0.00 1.90
2781 2943 2.494870 GCACAAGAGCAAGGGATTCATT 59.505 45.455 0.00 0.00 0.00 2.57
2782 2944 2.097825 GCACAAGAGCAAGGGATTCAT 58.902 47.619 0.00 0.00 0.00 2.57
2783 2945 1.074405 AGCACAAGAGCAAGGGATTCA 59.926 47.619 0.00 0.00 36.85 2.57
2784 2946 1.831580 AGCACAAGAGCAAGGGATTC 58.168 50.000 0.00 0.00 36.85 2.52
2785 2947 2.165998 GAAGCACAAGAGCAAGGGATT 58.834 47.619 0.00 0.00 36.85 3.01
2786 2948 1.074405 TGAAGCACAAGAGCAAGGGAT 59.926 47.619 0.00 0.00 36.85 3.85
2787 2949 0.473755 TGAAGCACAAGAGCAAGGGA 59.526 50.000 0.00 0.00 36.85 4.20
2788 2950 1.321474 TTGAAGCACAAGAGCAAGGG 58.679 50.000 0.00 0.00 36.85 3.95
2789 2951 3.067180 TCTTTTGAAGCACAAGAGCAAGG 59.933 43.478 8.55 0.00 39.55 3.61
2790 2952 4.297299 TCTTTTGAAGCACAAGAGCAAG 57.703 40.909 8.55 5.09 39.55 4.01
2791 2953 4.924305 ATCTTTTGAAGCACAAGAGCAA 57.076 36.364 8.55 0.00 39.55 3.91
2792 2954 6.432162 AGATTATCTTTTGAAGCACAAGAGCA 59.568 34.615 8.55 0.00 39.55 4.26
2793 2955 6.850555 AGATTATCTTTTGAAGCACAAGAGC 58.149 36.000 8.55 0.00 39.55 4.09
2794 2956 8.728833 AGAAGATTATCTTTTGAAGCACAAGAG 58.271 33.333 8.99 7.52 36.73 2.85
2795 2957 8.627208 AGAAGATTATCTTTTGAAGCACAAGA 57.373 30.769 8.99 0.00 36.73 3.02
2796 2958 8.509690 TGAGAAGATTATCTTTTGAAGCACAAG 58.490 33.333 8.99 0.00 36.73 3.16
2797 2959 8.394971 TGAGAAGATTATCTTTTGAAGCACAA 57.605 30.769 8.99 0.00 36.73 3.33
2798 2960 7.361542 GCTGAGAAGATTATCTTTTGAAGCACA 60.362 37.037 17.40 6.84 36.73 4.57
2799 2961 6.966066 GCTGAGAAGATTATCTTTTGAAGCAC 59.034 38.462 17.40 2.86 36.73 4.40
2800 2962 6.656270 TGCTGAGAAGATTATCTTTTGAAGCA 59.344 34.615 19.45 19.45 36.73 3.91
2801 2963 7.081526 TGCTGAGAAGATTATCTTTTGAAGC 57.918 36.000 8.99 13.63 36.73 3.86
2802 2964 8.266392 ACTGCTGAGAAGATTATCTTTTGAAG 57.734 34.615 8.99 5.01 36.73 3.02
2803 2965 8.627208 AACTGCTGAGAAGATTATCTTTTGAA 57.373 30.769 8.99 0.00 36.73 2.69
2804 2966 9.725019 TTAACTGCTGAGAAGATTATCTTTTGA 57.275 29.630 8.99 0.00 36.73 2.69
2807 2969 9.732130 AGTTTAACTGCTGAGAAGATTATCTTT 57.268 29.630 8.99 0.00 36.73 2.52
2808 2970 9.732130 AAGTTTAACTGCTGAGAAGATTATCTT 57.268 29.630 7.23 7.23 39.87 2.40
2809 2971 9.377312 GAAGTTTAACTGCTGAGAAGATTATCT 57.623 33.333 0.00 0.00 0.00 1.98
2810 2972 8.608317 GGAAGTTTAACTGCTGAGAAGATTATC 58.392 37.037 2.80 0.00 0.00 1.75
2811 2973 8.325046 AGGAAGTTTAACTGCTGAGAAGATTAT 58.675 33.333 2.80 0.00 0.00 1.28
2812 2974 7.680730 AGGAAGTTTAACTGCTGAGAAGATTA 58.319 34.615 2.80 0.00 0.00 1.75
2813 2975 6.538263 AGGAAGTTTAACTGCTGAGAAGATT 58.462 36.000 2.80 0.00 0.00 2.40
2814 2976 6.120507 AGGAAGTTTAACTGCTGAGAAGAT 57.879 37.500 2.80 0.00 0.00 2.40
2815 2977 5.070446 TGAGGAAGTTTAACTGCTGAGAAGA 59.930 40.000 2.80 0.00 0.00 2.87
2816 2978 5.300752 TGAGGAAGTTTAACTGCTGAGAAG 58.699 41.667 2.80 0.00 0.00 2.85
2817 2979 5.290493 TGAGGAAGTTTAACTGCTGAGAA 57.710 39.130 2.80 0.00 0.00 2.87
2818 2980 4.955811 TGAGGAAGTTTAACTGCTGAGA 57.044 40.909 2.80 0.00 0.00 3.27
2819 2981 5.300752 TCTTGAGGAAGTTTAACTGCTGAG 58.699 41.667 2.80 0.00 0.00 3.35
2820 2982 5.290493 TCTTGAGGAAGTTTAACTGCTGA 57.710 39.130 2.80 0.00 0.00 4.26
2821 2983 6.566197 AATCTTGAGGAAGTTTAACTGCTG 57.434 37.500 2.80 0.00 0.00 4.41
2822 2984 7.285401 TCAAAATCTTGAGGAAGTTTAACTGCT 59.715 33.333 2.80 0.00 36.62 4.24
2823 2985 7.379797 GTCAAAATCTTGAGGAAGTTTAACTGC 59.620 37.037 0.00 0.00 42.27 4.40
2824 2986 8.624776 AGTCAAAATCTTGAGGAAGTTTAACTG 58.375 33.333 0.00 0.00 42.27 3.16
2825 2987 8.624776 CAGTCAAAATCTTGAGGAAGTTTAACT 58.375 33.333 0.00 0.00 42.27 2.24
2826 2988 8.406297 ACAGTCAAAATCTTGAGGAAGTTTAAC 58.594 33.333 0.00 0.00 42.27 2.01
2827 2989 8.519799 ACAGTCAAAATCTTGAGGAAGTTTAA 57.480 30.769 0.00 0.00 42.27 1.52
2828 2990 7.993183 AGACAGTCAAAATCTTGAGGAAGTTTA 59.007 33.333 2.66 0.00 42.27 2.01
2829 2991 6.830838 AGACAGTCAAAATCTTGAGGAAGTTT 59.169 34.615 2.66 0.00 42.27 2.66
2830 2992 6.360618 AGACAGTCAAAATCTTGAGGAAGTT 58.639 36.000 2.66 0.00 42.27 2.66
2831 2993 5.934781 AGACAGTCAAAATCTTGAGGAAGT 58.065 37.500 2.66 0.00 42.27 3.01
2832 2994 8.449397 CAATAGACAGTCAAAATCTTGAGGAAG 58.551 37.037 2.66 0.00 42.27 3.46
2833 2995 7.391554 CCAATAGACAGTCAAAATCTTGAGGAA 59.608 37.037 2.66 0.00 42.27 3.36
2834 2996 6.881065 CCAATAGACAGTCAAAATCTTGAGGA 59.119 38.462 2.66 0.00 42.27 3.71
2835 2997 6.094603 CCCAATAGACAGTCAAAATCTTGAGG 59.905 42.308 2.66 0.00 42.27 3.86
2836 2998 6.881065 TCCCAATAGACAGTCAAAATCTTGAG 59.119 38.462 2.66 0.00 42.27 3.02
2837 2999 6.778821 TCCCAATAGACAGTCAAAATCTTGA 58.221 36.000 2.66 0.00 39.30 3.02
2838 3000 6.881065 TCTCCCAATAGACAGTCAAAATCTTG 59.119 38.462 2.66 0.00 0.00 3.02
2839 3001 7.020827 TCTCCCAATAGACAGTCAAAATCTT 57.979 36.000 2.66 0.00 0.00 2.40
2840 3002 6.627087 TCTCCCAATAGACAGTCAAAATCT 57.373 37.500 2.66 0.00 0.00 2.40
2841 3003 6.825721 ACATCTCCCAATAGACAGTCAAAATC 59.174 38.462 2.66 0.00 0.00 2.17
2842 3004 6.725364 ACATCTCCCAATAGACAGTCAAAAT 58.275 36.000 2.66 0.00 0.00 1.82
2843 3005 6.126863 ACATCTCCCAATAGACAGTCAAAA 57.873 37.500 2.66 0.00 0.00 2.44
2844 3006 5.762179 ACATCTCCCAATAGACAGTCAAA 57.238 39.130 2.66 0.00 0.00 2.69
2845 3007 5.491070 CAACATCTCCCAATAGACAGTCAA 58.509 41.667 2.66 0.00 0.00 3.18
2846 3008 4.080919 CCAACATCTCCCAATAGACAGTCA 60.081 45.833 2.66 0.00 0.00 3.41
2847 3009 4.162320 TCCAACATCTCCCAATAGACAGTC 59.838 45.833 0.00 0.00 0.00 3.51
2848 3010 4.080863 GTCCAACATCTCCCAATAGACAGT 60.081 45.833 0.00 0.00 0.00 3.55
2849 3011 4.163078 AGTCCAACATCTCCCAATAGACAG 59.837 45.833 0.00 0.00 0.00 3.51
2850 3012 4.080919 CAGTCCAACATCTCCCAATAGACA 60.081 45.833 0.00 0.00 0.00 3.41
2851 3013 4.162320 TCAGTCCAACATCTCCCAATAGAC 59.838 45.833 0.00 0.00 0.00 2.59
2852 3014 4.361783 TCAGTCCAACATCTCCCAATAGA 58.638 43.478 0.00 0.00 0.00 1.98
2853 3015 4.760530 TCAGTCCAACATCTCCCAATAG 57.239 45.455 0.00 0.00 0.00 1.73
2854 3016 5.512942 TTTCAGTCCAACATCTCCCAATA 57.487 39.130 0.00 0.00 0.00 1.90
2855 3017 4.387026 TTTCAGTCCAACATCTCCCAAT 57.613 40.909 0.00 0.00 0.00 3.16
2856 3018 3.874383 TTTCAGTCCAACATCTCCCAA 57.126 42.857 0.00 0.00 0.00 4.12
2857 3019 3.754965 CTTTTCAGTCCAACATCTCCCA 58.245 45.455 0.00 0.00 0.00 4.37
2858 3020 2.489722 GCTTTTCAGTCCAACATCTCCC 59.510 50.000 0.00 0.00 0.00 4.30
2859 3021 3.149196 TGCTTTTCAGTCCAACATCTCC 58.851 45.455 0.00 0.00 0.00 3.71
2860 3022 4.516698 TCTTGCTTTTCAGTCCAACATCTC 59.483 41.667 0.00 0.00 0.00 2.75
2861 3023 4.464008 TCTTGCTTTTCAGTCCAACATCT 58.536 39.130 0.00 0.00 0.00 2.90
2862 3024 4.320788 CCTCTTGCTTTTCAGTCCAACATC 60.321 45.833 0.00 0.00 0.00 3.06
2863 3025 3.571401 CCTCTTGCTTTTCAGTCCAACAT 59.429 43.478 0.00 0.00 0.00 2.71
2864 3026 2.951642 CCTCTTGCTTTTCAGTCCAACA 59.048 45.455 0.00 0.00 0.00 3.33
2865 3027 2.294512 CCCTCTTGCTTTTCAGTCCAAC 59.705 50.000 0.00 0.00 0.00 3.77
2866 3028 2.586425 CCCTCTTGCTTTTCAGTCCAA 58.414 47.619 0.00 0.00 0.00 3.53
2867 3029 1.202927 CCCCTCTTGCTTTTCAGTCCA 60.203 52.381 0.00 0.00 0.00 4.02
2868 3030 1.073923 TCCCCTCTTGCTTTTCAGTCC 59.926 52.381 0.00 0.00 0.00 3.85
2869 3031 2.568623 TCCCCTCTTGCTTTTCAGTC 57.431 50.000 0.00 0.00 0.00 3.51
2870 3032 3.532641 AATCCCCTCTTGCTTTTCAGT 57.467 42.857 0.00 0.00 0.00 3.41
2871 3033 5.982890 TTTAATCCCCTCTTGCTTTTCAG 57.017 39.130 0.00 0.00 0.00 3.02
2872 3034 6.256053 AGATTTAATCCCCTCTTGCTTTTCA 58.744 36.000 0.78 0.00 0.00 2.69
2873 3035 6.378280 TGAGATTTAATCCCCTCTTGCTTTTC 59.622 38.462 0.78 0.00 0.00 2.29
2874 3036 6.256053 TGAGATTTAATCCCCTCTTGCTTTT 58.744 36.000 0.78 0.00 0.00 2.27
2875 3037 5.831103 TGAGATTTAATCCCCTCTTGCTTT 58.169 37.500 0.78 0.00 0.00 3.51
2876 3038 5.456921 TGAGATTTAATCCCCTCTTGCTT 57.543 39.130 0.78 0.00 0.00 3.91
2877 3039 5.044550 ACTTGAGATTTAATCCCCTCTTGCT 60.045 40.000 0.78 0.00 0.00 3.91
2878 3040 5.067023 CACTTGAGATTTAATCCCCTCTTGC 59.933 44.000 0.78 0.00 0.00 4.01
2879 3041 5.591877 CCACTTGAGATTTAATCCCCTCTTG 59.408 44.000 0.78 0.00 0.00 3.02
2880 3042 5.254032 ACCACTTGAGATTTAATCCCCTCTT 59.746 40.000 0.78 0.00 0.00 2.85
2881 3043 4.790790 ACCACTTGAGATTTAATCCCCTCT 59.209 41.667 0.78 0.00 0.00 3.69
2882 3044 5.117406 ACCACTTGAGATTTAATCCCCTC 57.883 43.478 0.78 0.00 0.00 4.30
2883 3045 5.536497 AACCACTTGAGATTTAATCCCCT 57.464 39.130 0.78 0.00 0.00 4.79
2884 3046 5.714806 TCAAACCACTTGAGATTTAATCCCC 59.285 40.000 0.78 0.00 39.20 4.81
2885 3047 6.834168 TCAAACCACTTGAGATTTAATCCC 57.166 37.500 0.78 0.00 39.20 3.85
2897 3059 4.309099 CAACCATCCAATCAAACCACTTG 58.691 43.478 0.00 0.00 36.25 3.16
2898 3060 3.324556 CCAACCATCCAATCAAACCACTT 59.675 43.478 0.00 0.00 0.00 3.16
2899 3061 2.899256 CCAACCATCCAATCAAACCACT 59.101 45.455 0.00 0.00 0.00 4.00
2900 3062 2.896685 TCCAACCATCCAATCAAACCAC 59.103 45.455 0.00 0.00 0.00 4.16
2901 3063 2.896685 GTCCAACCATCCAATCAAACCA 59.103 45.455 0.00 0.00 0.00 3.67
2902 3064 3.165071 AGTCCAACCATCCAATCAAACC 58.835 45.455 0.00 0.00 0.00 3.27
2903 3065 4.764823 TGTAGTCCAACCATCCAATCAAAC 59.235 41.667 0.00 0.00 0.00 2.93
2904 3066 4.991776 TGTAGTCCAACCATCCAATCAAA 58.008 39.130 0.00 0.00 0.00 2.69
2905 3067 4.649267 TGTAGTCCAACCATCCAATCAA 57.351 40.909 0.00 0.00 0.00 2.57
2906 3068 4.649267 TTGTAGTCCAACCATCCAATCA 57.351 40.909 0.00 0.00 0.00 2.57
2907 3069 4.142381 GCTTTGTAGTCCAACCATCCAATC 60.142 45.833 0.00 0.00 31.20 2.67
2908 3070 3.763897 GCTTTGTAGTCCAACCATCCAAT 59.236 43.478 0.00 0.00 31.20 3.16
2909 3071 3.153919 GCTTTGTAGTCCAACCATCCAA 58.846 45.455 0.00 0.00 31.20 3.53
2910 3072 2.554344 GGCTTTGTAGTCCAACCATCCA 60.554 50.000 0.00 0.00 31.20 3.41
2911 3073 2.092323 GGCTTTGTAGTCCAACCATCC 58.908 52.381 0.00 0.00 31.20 3.51
2912 3074 3.073274 AGGCTTTGTAGTCCAACCATC 57.927 47.619 0.00 0.00 31.20 3.51
2913 3075 3.525800 AAGGCTTTGTAGTCCAACCAT 57.474 42.857 0.00 0.00 31.20 3.55
2914 3076 3.306472 AAAGGCTTTGTAGTCCAACCA 57.694 42.857 12.53 0.00 31.20 3.67
2915 3077 3.634910 TCAAAAGGCTTTGTAGTCCAACC 59.365 43.478 14.19 0.00 42.26 3.77
2916 3078 4.911514 TCAAAAGGCTTTGTAGTCCAAC 57.088 40.909 14.19 0.00 42.26 3.77
2917 3079 5.923733 TTTCAAAAGGCTTTGTAGTCCAA 57.076 34.783 14.19 0.00 42.26 3.53
2918 3080 5.596361 TGATTTCAAAAGGCTTTGTAGTCCA 59.404 36.000 14.19 5.83 42.26 4.02
2919 3081 6.084326 TGATTTCAAAAGGCTTTGTAGTCC 57.916 37.500 14.19 3.29 42.26 3.85
2920 3082 6.739112 ACTGATTTCAAAAGGCTTTGTAGTC 58.261 36.000 14.19 9.05 42.26 2.59
2921 3083 6.715347 ACTGATTTCAAAAGGCTTTGTAGT 57.285 33.333 14.19 7.53 42.26 2.73
2924 3086 9.077885 TCTAATACTGATTTCAAAAGGCTTTGT 57.922 29.630 14.19 6.89 42.26 2.83
2925 3087 9.912634 TTCTAATACTGATTTCAAAAGGCTTTG 57.087 29.630 14.19 8.05 42.88 2.77
2927 3089 8.743714 CCTTCTAATACTGATTTCAAAAGGCTT 58.256 33.333 0.00 0.00 0.00 4.35
2928 3090 7.890655 ACCTTCTAATACTGATTTCAAAAGGCT 59.109 33.333 0.00 0.00 0.00 4.58
2929 3091 7.970614 CACCTTCTAATACTGATTTCAAAAGGC 59.029 37.037 0.00 0.00 0.00 4.35
2930 3092 8.462016 CCACCTTCTAATACTGATTTCAAAAGG 58.538 37.037 0.00 0.00 0.00 3.11
2931 3093 9.231297 TCCACCTTCTAATACTGATTTCAAAAG 57.769 33.333 0.00 0.00 0.00 2.27
2932 3094 9.231297 CTCCACCTTCTAATACTGATTTCAAAA 57.769 33.333 0.00 0.00 0.00 2.44
2933 3095 8.383175 ACTCCACCTTCTAATACTGATTTCAAA 58.617 33.333 0.00 0.00 0.00 2.69
2934 3096 7.918076 ACTCCACCTTCTAATACTGATTTCAA 58.082 34.615 0.00 0.00 0.00 2.69
2935 3097 7.496346 ACTCCACCTTCTAATACTGATTTCA 57.504 36.000 0.00 0.00 0.00 2.69
2936 3098 8.261522 AGAACTCCACCTTCTAATACTGATTTC 58.738 37.037 0.00 0.00 0.00 2.17
2937 3099 8.152023 AGAACTCCACCTTCTAATACTGATTT 57.848 34.615 0.00 0.00 0.00 2.17
2938 3100 7.621683 AGAGAACTCCACCTTCTAATACTGATT 59.378 37.037 0.00 0.00 0.00 2.57
2939 3101 7.129425 AGAGAACTCCACCTTCTAATACTGAT 58.871 38.462 0.00 0.00 0.00 2.90
2940 3102 6.494952 AGAGAACTCCACCTTCTAATACTGA 58.505 40.000 0.00 0.00 0.00 3.41
2941 3103 6.605594 AGAGAGAACTCCACCTTCTAATACTG 59.394 42.308 0.00 0.00 43.53 2.74
2942 3104 6.737608 AGAGAGAACTCCACCTTCTAATACT 58.262 40.000 0.00 0.00 43.53 2.12
2943 3105 7.262048 CAAGAGAGAACTCCACCTTCTAATAC 58.738 42.308 0.00 0.00 43.53 1.89
2944 3106 6.381420 CCAAGAGAGAACTCCACCTTCTAATA 59.619 42.308 0.00 0.00 43.53 0.98
2945 3107 5.188751 CCAAGAGAGAACTCCACCTTCTAAT 59.811 44.000 0.00 0.00 43.53 1.73
2946 3108 4.528596 CCAAGAGAGAACTCCACCTTCTAA 59.471 45.833 0.00 0.00 43.53 2.10
2947 3109 4.090090 CCAAGAGAGAACTCCACCTTCTA 58.910 47.826 0.00 0.00 43.53 2.10
2948 3110 2.903135 CCAAGAGAGAACTCCACCTTCT 59.097 50.000 0.00 0.00 43.53 2.85
2949 3111 2.900546 TCCAAGAGAGAACTCCACCTTC 59.099 50.000 0.00 0.00 43.53 3.46
2950 3112 2.977808 TCCAAGAGAGAACTCCACCTT 58.022 47.619 0.00 0.00 43.53 3.50
2951 3113 2.635427 GTTCCAAGAGAGAACTCCACCT 59.365 50.000 0.00 0.00 43.53 4.00
2952 3114 2.368875 TGTTCCAAGAGAGAACTCCACC 59.631 50.000 5.36 0.00 43.28 4.61
2953 3115 3.753294 TGTTCCAAGAGAGAACTCCAC 57.247 47.619 5.36 0.00 43.28 4.02
2954 3116 5.721480 TCATATGTTCCAAGAGAGAACTCCA 59.279 40.000 1.90 0.00 43.28 3.86
2955 3117 6.227298 TCATATGTTCCAAGAGAGAACTCC 57.773 41.667 1.90 0.00 43.28 3.85
2956 3118 6.705381 CCATCATATGTTCCAAGAGAGAACTC 59.295 42.308 1.90 0.00 43.28 3.01
2957 3119 6.409005 CCCATCATATGTTCCAAGAGAGAACT 60.409 42.308 1.90 0.00 43.28 3.01
2958 3120 5.762218 CCCATCATATGTTCCAAGAGAGAAC 59.238 44.000 1.90 0.00 43.20 3.01
2959 3121 5.667172 TCCCATCATATGTTCCAAGAGAGAA 59.333 40.000 1.90 0.00 0.00 2.87
2960 3122 5.218959 TCCCATCATATGTTCCAAGAGAGA 58.781 41.667 1.90 0.00 0.00 3.10
2961 3123 5.071519 ACTCCCATCATATGTTCCAAGAGAG 59.928 44.000 1.90 2.98 0.00 3.20
2962 3124 4.971282 ACTCCCATCATATGTTCCAAGAGA 59.029 41.667 1.90 0.00 0.00 3.10
2963 3125 5.061853 CACTCCCATCATATGTTCCAAGAG 58.938 45.833 1.90 5.81 0.00 2.85
2964 3126 4.721274 TCACTCCCATCATATGTTCCAAGA 59.279 41.667 1.90 0.00 0.00 3.02
2965 3127 5.039920 TCACTCCCATCATATGTTCCAAG 57.960 43.478 1.90 0.00 0.00 3.61
2966 3128 5.449297 TTCACTCCCATCATATGTTCCAA 57.551 39.130 1.90 0.00 0.00 3.53
2967 3129 5.651612 ATTCACTCCCATCATATGTTCCA 57.348 39.130 1.90 0.00 0.00 3.53
2968 3130 6.966534 AAATTCACTCCCATCATATGTTCC 57.033 37.500 1.90 0.00 0.00 3.62
2969 3131 6.698766 GCAAAATTCACTCCCATCATATGTTC 59.301 38.462 1.90 0.00 0.00 3.18
2970 3132 6.381994 AGCAAAATTCACTCCCATCATATGTT 59.618 34.615 1.90 0.00 0.00 2.71
2971 3133 5.895534 AGCAAAATTCACTCCCATCATATGT 59.104 36.000 1.90 0.00 0.00 2.29
2972 3134 6.401047 AGCAAAATTCACTCCCATCATATG 57.599 37.500 0.00 0.00 0.00 1.78
2973 3135 6.238842 CGAAGCAAAATTCACTCCCATCATAT 60.239 38.462 0.00 0.00 0.00 1.78
2974 3136 5.066375 CGAAGCAAAATTCACTCCCATCATA 59.934 40.000 0.00 0.00 0.00 2.15
2975 3137 4.142315 CGAAGCAAAATTCACTCCCATCAT 60.142 41.667 0.00 0.00 0.00 2.45
2976 3138 3.191162 CGAAGCAAAATTCACTCCCATCA 59.809 43.478 0.00 0.00 0.00 3.07
2977 3139 3.440173 TCGAAGCAAAATTCACTCCCATC 59.560 43.478 0.00 0.00 0.00 3.51
2978 3140 3.420893 TCGAAGCAAAATTCACTCCCAT 58.579 40.909 0.00 0.00 0.00 4.00
2979 3141 2.813754 CTCGAAGCAAAATTCACTCCCA 59.186 45.455 0.00 0.00 0.00 4.37
2980 3142 2.814336 ACTCGAAGCAAAATTCACTCCC 59.186 45.455 0.00 0.00 0.00 4.30
2981 3143 4.489679 AACTCGAAGCAAAATTCACTCC 57.510 40.909 0.00 0.00 0.00 3.85
2982 3144 6.146347 AGTCTAACTCGAAGCAAAATTCACTC 59.854 38.462 0.00 0.00 0.00 3.51
2983 3145 5.992217 AGTCTAACTCGAAGCAAAATTCACT 59.008 36.000 0.00 0.00 0.00 3.41
2984 3146 6.229561 AGTCTAACTCGAAGCAAAATTCAC 57.770 37.500 0.00 0.00 0.00 3.18
2985 3147 7.116376 CACTAGTCTAACTCGAAGCAAAATTCA 59.884 37.037 0.00 0.00 0.00 2.57
2986 3148 7.412020 CCACTAGTCTAACTCGAAGCAAAATTC 60.412 40.741 0.00 0.00 0.00 2.17
2987 3149 6.369065 CCACTAGTCTAACTCGAAGCAAAATT 59.631 38.462 0.00 0.00 0.00 1.82
2988 3150 5.869888 CCACTAGTCTAACTCGAAGCAAAAT 59.130 40.000 0.00 0.00 0.00 1.82
2989 3151 5.227908 CCACTAGTCTAACTCGAAGCAAAA 58.772 41.667 0.00 0.00 0.00 2.44
2990 3152 4.321750 CCCACTAGTCTAACTCGAAGCAAA 60.322 45.833 0.00 0.00 0.00 3.68
2991 3153 3.192844 CCCACTAGTCTAACTCGAAGCAA 59.807 47.826 0.00 0.00 0.00 3.91
2992 3154 2.753452 CCCACTAGTCTAACTCGAAGCA 59.247 50.000 0.00 0.00 0.00 3.91
2993 3155 3.015327 TCCCACTAGTCTAACTCGAAGC 58.985 50.000 0.00 0.00 0.00 3.86
2994 3156 6.543100 ACTTATCCCACTAGTCTAACTCGAAG 59.457 42.308 0.00 0.00 0.00 3.79
2995 3157 6.318144 CACTTATCCCACTAGTCTAACTCGAA 59.682 42.308 0.00 0.00 0.00 3.71
2996 3158 5.821470 CACTTATCCCACTAGTCTAACTCGA 59.179 44.000 0.00 0.00 0.00 4.04
2997 3159 5.008811 CCACTTATCCCACTAGTCTAACTCG 59.991 48.000 0.00 0.00 0.00 4.18
2998 3160 5.302313 CCCACTTATCCCACTAGTCTAACTC 59.698 48.000 0.00 0.00 0.00 3.01
2999 3161 5.209659 CCCACTTATCCCACTAGTCTAACT 58.790 45.833 0.00 0.00 0.00 2.24
3000 3162 4.344390 CCCCACTTATCCCACTAGTCTAAC 59.656 50.000 0.00 0.00 0.00 2.34
3001 3163 4.015918 ACCCCACTTATCCCACTAGTCTAA 60.016 45.833 0.00 0.00 0.00 2.10
3002 3164 3.534747 ACCCCACTTATCCCACTAGTCTA 59.465 47.826 0.00 0.00 0.00 2.59
3003 3165 2.318207 ACCCCACTTATCCCACTAGTCT 59.682 50.000 0.00 0.00 0.00 3.24
3004 3166 2.760581 ACCCCACTTATCCCACTAGTC 58.239 52.381 0.00 0.00 0.00 2.59
3005 3167 2.963654 ACCCCACTTATCCCACTAGT 57.036 50.000 0.00 0.00 0.00 2.57
3006 3168 9.589461 CTATATATACCCCACTTATCCCACTAG 57.411 40.741 0.00 0.00 0.00 2.57
3007 3169 8.517047 CCTATATATACCCCACTTATCCCACTA 58.483 40.741 0.00 0.00 0.00 2.74
3008 3170 7.371043 CCTATATATACCCCACTTATCCCACT 58.629 42.308 0.00 0.00 0.00 4.00
3009 3171 6.557633 CCCTATATATACCCCACTTATCCCAC 59.442 46.154 0.00 0.00 0.00 4.61
3010 3172 6.225278 ACCCTATATATACCCCACTTATCCCA 59.775 42.308 0.00 0.00 0.00 4.37
3011 3173 6.557633 CACCCTATATATACCCCACTTATCCC 59.442 46.154 0.00 0.00 0.00 3.85
3012 3174 6.557633 CCACCCTATATATACCCCACTTATCC 59.442 46.154 0.00 0.00 0.00 2.59
3013 3175 7.289549 GTCCACCCTATATATACCCCACTTATC 59.710 44.444 0.00 0.00 0.00 1.75
3014 3176 7.034574 AGTCCACCCTATATATACCCCACTTAT 60.035 40.741 0.00 0.00 0.00 1.73
3015 3177 6.281134 AGTCCACCCTATATATACCCCACTTA 59.719 42.308 0.00 0.00 0.00 2.24
3016 3178 5.078858 AGTCCACCCTATATATACCCCACTT 59.921 44.000 0.00 0.00 0.00 3.16
3017 3179 4.615654 AGTCCACCCTATATATACCCCACT 59.384 45.833 0.00 0.00 0.00 4.00
3018 3180 4.956582 AGTCCACCCTATATATACCCCAC 58.043 47.826 0.00 0.00 0.00 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.