Multiple sequence alignment - TraesCS3B01G153900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G153900 chr3B 100.000 5721 0 0 1 5721 146190686 146184966 0.000000e+00 10565
1 TraesCS3B01G153900 chr3B 84.964 552 63 10 2 535 745520806 745521355 5.040000e-150 542
2 TraesCS3B01G153900 chr3D 95.130 4168 118 30 766 4909 95253169 95249063 0.000000e+00 6493
3 TraesCS3B01G153900 chr3D 88.701 708 51 12 5024 5721 95249064 95248376 0.000000e+00 837
4 TraesCS3B01G153900 chr3D 84.629 553 62 14 2 535 413655093 413654545 3.930000e-146 529
5 TraesCS3B01G153900 chr3D 91.339 127 11 0 4907 5033 107670962 107671088 2.120000e-39 174
6 TraesCS3B01G153900 chr3D 82.313 147 18 8 1699 1841 4975726 4975868 2.800000e-23 121
7 TraesCS3B01G153900 chr3A 88.041 2935 269 39 1989 4903 113357800 113354928 0.000000e+00 3400
8 TraesCS3B01G153900 chr3A 85.463 454 32 16 830 1260 113359163 113358721 5.260000e-120 442
9 TraesCS3B01G153900 chr3A 81.922 437 35 19 5316 5721 113344685 113344262 4.270000e-86 329
10 TraesCS3B01G153900 chr3A 88.339 283 18 8 5031 5301 113354917 113354638 5.530000e-85 326
11 TraesCS3B01G153900 chr6D 85.533 553 59 11 2 535 48891175 48891725 5.010000e-155 558
12 TraesCS3B01G153900 chr2A 85.609 542 56 14 11 534 564223515 564222978 3.010000e-152 549
13 TraesCS3B01G153900 chr2A 85.688 538 51 16 2 517 656830738 656831271 1.400000e-150 544
14 TraesCS3B01G153900 chr5D 84.727 550 64 7 2 534 285022062 285022608 3.030000e-147 532
15 TraesCS3B01G153900 chr5D 87.409 413 44 7 2 411 216052943 216053350 8.680000e-128 468
16 TraesCS3B01G153900 chr4B 84.854 548 62 12 6 535 368069389 368069933 3.030000e-147 532
17 TraesCS3B01G153900 chr5B 87.651 413 46 4 2 411 541282387 541281977 5.190000e-130 475
18 TraesCS3B01G153900 chr5B 79.885 174 25 9 1698 1866 539302390 539302558 1.010000e-22 119
19 TraesCS3B01G153900 chr1D 92.742 124 8 1 4908 5031 116548340 116548462 1.640000e-40 178
20 TraesCS3B01G153900 chr1D 92.623 122 9 0 4907 5028 295146171 295146292 5.890000e-40 176
21 TraesCS3B01G153900 chr1D 84.967 153 10 8 1102 1253 142657415 142657555 5.980000e-30 143
22 TraesCS3B01G153900 chr1D 85.714 98 13 1 2137 2233 142658249 142658346 1.010000e-17 102
23 TraesCS3B01G153900 chr1A 94.017 117 7 0 4906 5022 208212531 208212647 1.640000e-40 178
24 TraesCS3B01G153900 chr1A 91.870 123 10 0 4908 5030 32469792 32469670 7.620000e-39 172
25 TraesCS3B01G153900 chr1A 85.621 153 9 8 1102 1253 147356890 147356750 1.280000e-31 148
26 TraesCS3B01G153900 chr2B 93.966 116 7 0 4907 5022 657072113 657072228 5.890000e-40 176
27 TraesCS3B01G153900 chr1B 93.966 116 7 0 4907 5022 8855866 8855981 5.890000e-40 176
28 TraesCS3B01G153900 chr1B 84.967 153 10 8 1102 1253 191955358 191955498 5.980000e-30 143
29 TraesCS3B01G153900 chr5A 92.562 121 9 0 4908 5028 689428126 689428006 2.120000e-39 174
30 TraesCS3B01G153900 chr6B 90.152 132 12 1 4906 5037 617675284 617675154 2.740000e-38 171
31 TraesCS3B01G153900 chr7D 92.208 77 6 0 515 591 566830930 566831006 6.060000e-20 110


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G153900 chr3B 146184966 146190686 5720 True 10565.000000 10565 100.0000 1 5721 1 chr3B.!!$R1 5720
1 TraesCS3B01G153900 chr3B 745520806 745521355 549 False 542.000000 542 84.9640 2 535 1 chr3B.!!$F1 533
2 TraesCS3B01G153900 chr3D 95248376 95253169 4793 True 3665.000000 6493 91.9155 766 5721 2 chr3D.!!$R2 4955
3 TraesCS3B01G153900 chr3D 413654545 413655093 548 True 529.000000 529 84.6290 2 535 1 chr3D.!!$R1 533
4 TraesCS3B01G153900 chr3A 113354638 113359163 4525 True 1389.333333 3400 87.2810 830 5301 3 chr3A.!!$R2 4471
5 TraesCS3B01G153900 chr6D 48891175 48891725 550 False 558.000000 558 85.5330 2 535 1 chr6D.!!$F1 533
6 TraesCS3B01G153900 chr2A 564222978 564223515 537 True 549.000000 549 85.6090 11 534 1 chr2A.!!$R1 523
7 TraesCS3B01G153900 chr2A 656830738 656831271 533 False 544.000000 544 85.6880 2 517 1 chr2A.!!$F1 515
8 TraesCS3B01G153900 chr5D 285022062 285022608 546 False 532.000000 532 84.7270 2 534 1 chr5D.!!$F2 532
9 TraesCS3B01G153900 chr4B 368069389 368069933 544 False 532.000000 532 84.8540 6 535 1 chr4B.!!$F1 529

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
691 716 0.103572 GACGCCGTTCTATTGCCCTA 59.896 55.000 0.00 0.00 0.00 3.53 F
1457 1747 0.097674 GAAATGTCGCATCGCAGCTT 59.902 50.000 0.00 0.00 0.00 3.74 F
1547 1841 0.179029 CCGTCTGGGAGTTTGGTTGT 60.179 55.000 0.00 0.00 38.47 3.32 F
1548 1842 1.071071 CCGTCTGGGAGTTTGGTTGTA 59.929 52.381 0.00 0.00 38.47 2.41 F
1948 2247 1.664659 CCGAGAAGATGCTGCTTTCTG 59.335 52.381 15.59 9.89 0.00 3.02 F
3666 4155 1.980765 AGTGCATTGTCTGGAGGAGAA 59.019 47.619 0.00 0.00 30.26 2.87 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1715 2011 1.078143 GAACTCCTGCCCTCGCAAT 60.078 57.895 0.0 0.0 46.66 3.56 R
2845 3327 3.674997 TGCAGCTTCAACCTTACCTTAG 58.325 45.455 0.0 0.0 0.00 2.18 R
3341 3828 5.670485 ACACCTTCATCAGCAATAATACGA 58.330 37.500 0.0 0.0 0.00 3.43 R
3570 4057 1.265095 CACGTCTCAAAATGCACAGCT 59.735 47.619 0.0 0.0 0.00 4.24 R
3719 4209 0.973632 TGGCGTGATAGTTGAGGTGT 59.026 50.000 0.0 0.0 0.00 4.16 R
4920 5413 0.039165 GCTTGGGGCAAGTTTCTTCG 60.039 55.000 0.0 0.0 42.77 3.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 4.252073 CCAGAGGTCAACTTTGAGATCAG 58.748 47.826 0.00 0.00 37.98 2.90
55 56 6.411376 CACCATTACAACAAGGGATACTACA 58.589 40.000 0.00 0.00 0.00 2.74
76 77 8.119246 ACTACATAGCTGATGGTATCTATCCTT 58.881 37.037 0.00 0.00 40.18 3.36
108 109 5.063880 ACTCTTGTGAAGACAATACCCAAC 58.936 41.667 0.00 0.00 41.33 3.77
111 112 2.443632 TGTGAAGACAATACCCAACCCA 59.556 45.455 0.00 0.00 0.00 4.51
123 124 1.355720 CCCAACCCACAAGGAGAGAAT 59.644 52.381 0.00 0.00 39.89 2.40
131 132 6.444704 ACCCACAAGGAGAGAATAGATAGAA 58.555 40.000 0.00 0.00 39.89 2.10
145 146 7.836183 AGAATAGATAGAAGTTTGCCCAAATGT 59.164 33.333 0.00 0.00 32.36 2.71
170 173 1.139853 GTGCTAGGAAGGATGTGGAGG 59.860 57.143 0.00 0.00 0.00 4.30
186 190 2.087462 GAGGGTGCTTTTGGTGTGCC 62.087 60.000 0.00 0.00 0.00 5.01
203 207 0.533755 GCCTCAATCTCGATGGGGTG 60.534 60.000 5.34 0.00 40.77 4.61
209 213 0.902531 ATCTCGATGGGGTGTCGTTT 59.097 50.000 0.00 0.00 39.91 3.60
253 258 0.902531 CCGAGAAGCTTTGGGAGGTA 59.097 55.000 0.00 0.00 34.30 3.08
266 271 2.027192 TGGGAGGTAATGACTGCTTGTC 60.027 50.000 3.95 3.95 45.54 3.18
313 318 4.507710 AGTATGAGCGTGATGACAACATT 58.492 39.130 0.00 0.00 36.82 2.71
342 348 0.608130 GGGTTGGATTTTCAGGGTGC 59.392 55.000 0.00 0.00 0.00 5.01
346 352 3.432890 GGTTGGATTTTCAGGGTGCAAAA 60.433 43.478 0.00 0.00 0.00 2.44
347 353 4.388485 GTTGGATTTTCAGGGTGCAAAAT 58.612 39.130 0.00 0.00 35.38 1.82
348 354 4.005487 TGGATTTTCAGGGTGCAAAATG 57.995 40.909 0.00 0.00 33.31 2.32
349 355 3.390639 TGGATTTTCAGGGTGCAAAATGT 59.609 39.130 0.00 0.00 33.31 2.71
351 357 5.070981 TGGATTTTCAGGGTGCAAAATGTTA 59.929 36.000 0.00 0.00 33.31 2.41
359 365 2.094545 GGTGCAAAATGTTAGAGCCTGG 60.095 50.000 0.00 0.00 0.00 4.45
400 409 4.202010 CGTTTCAACAGTTCACCCAATTCT 60.202 41.667 0.00 0.00 0.00 2.40
411 420 9.123902 CAGTTCACCCAATTCTATCATGAAATA 57.876 33.333 0.00 0.00 0.00 1.40
429 452 9.961265 CATGAAATATCATATGCAACTTCAAGT 57.039 29.630 0.00 0.00 44.53 3.16
472 495 2.779755 ATCACATCGGCAACCAGTAA 57.220 45.000 0.00 0.00 0.00 2.24
557 582 8.668510 TTGCAATGTTTAATGTATTTGGTTGT 57.331 26.923 0.00 0.00 0.00 3.32
558 583 9.764363 TTGCAATGTTTAATGTATTTGGTTGTA 57.236 25.926 0.00 0.00 0.00 2.41
559 584 9.764363 TGCAATGTTTAATGTATTTGGTTGTAA 57.236 25.926 0.00 0.00 0.00 2.41
586 611 9.595823 AAGCTATTTACAATGTGTATAGTTCGT 57.404 29.630 13.99 0.00 32.20 3.85
607 632 9.872757 GTTCGTAAAATGTATACAATACATGGG 57.127 33.333 10.14 2.48 38.10 4.00
608 633 9.833917 TTCGTAAAATGTATACAATACATGGGA 57.166 29.630 10.14 4.47 38.10 4.37
613 638 8.868522 AAATGTATACAATACATGGGATCCAG 57.131 34.615 15.23 5.27 38.10 3.86
614 639 5.804639 TGTATACAATACATGGGATCCAGC 58.195 41.667 15.23 0.00 36.75 4.85
615 640 4.999469 ATACAATACATGGGATCCAGCA 57.001 40.909 15.23 3.27 36.75 4.41
616 641 3.219176 ACAATACATGGGATCCAGCAG 57.781 47.619 15.23 2.54 36.75 4.24
617 642 2.511218 ACAATACATGGGATCCAGCAGT 59.489 45.455 15.23 8.72 36.75 4.40
618 643 3.053395 ACAATACATGGGATCCAGCAGTT 60.053 43.478 15.23 0.00 36.75 3.16
619 644 2.715749 TACATGGGATCCAGCAGTTG 57.284 50.000 15.23 2.28 36.75 3.16
620 645 0.700564 ACATGGGATCCAGCAGTTGT 59.299 50.000 15.23 2.92 36.75 3.32
621 646 1.340405 ACATGGGATCCAGCAGTTGTC 60.340 52.381 15.23 0.00 36.75 3.18
622 647 0.107508 ATGGGATCCAGCAGTTGTCG 60.108 55.000 15.23 0.00 36.75 4.35
623 648 2.109126 GGGATCCAGCAGTTGTCGC 61.109 63.158 15.23 0.00 0.00 5.19
624 649 2.456119 GGATCCAGCAGTTGTCGCG 61.456 63.158 6.95 0.00 0.00 5.87
625 650 2.434884 ATCCAGCAGTTGTCGCGG 60.435 61.111 6.13 0.00 0.00 6.46
626 651 2.835701 GATCCAGCAGTTGTCGCGGA 62.836 60.000 6.13 0.00 36.81 5.54
627 652 3.414700 CCAGCAGTTGTCGCGGAC 61.415 66.667 6.13 3.78 0.00 4.79
628 653 3.414700 CAGCAGTTGTCGCGGACC 61.415 66.667 6.13 0.00 0.00 4.46
629 654 3.923864 AGCAGTTGTCGCGGACCA 61.924 61.111 6.13 0.00 0.00 4.02
630 655 3.414700 GCAGTTGTCGCGGACCAG 61.415 66.667 6.13 0.45 0.00 4.00
631 656 2.338620 CAGTTGTCGCGGACCAGA 59.661 61.111 6.13 0.00 0.00 3.86
632 657 1.079819 CAGTTGTCGCGGACCAGAT 60.080 57.895 6.13 0.00 0.00 2.90
633 658 1.079819 AGTTGTCGCGGACCAGATG 60.080 57.895 6.13 0.00 0.00 2.90
634 659 2.434185 TTGTCGCGGACCAGATGC 60.434 61.111 6.13 0.00 0.00 3.91
635 660 3.233259 TTGTCGCGGACCAGATGCA 62.233 57.895 6.13 0.00 0.00 3.96
636 661 2.202932 GTCGCGGACCAGATGCAT 60.203 61.111 6.13 0.00 0.00 3.96
637 662 2.106938 TCGCGGACCAGATGCATC 59.893 61.111 19.37 19.37 0.00 3.91
638 663 2.969238 CGCGGACCAGATGCATCC 60.969 66.667 23.06 8.20 0.00 3.51
639 664 2.190313 GCGGACCAGATGCATCCA 59.810 61.111 23.06 0.00 32.35 3.41
640 665 2.182842 GCGGACCAGATGCATCCAC 61.183 63.158 23.06 11.47 32.35 4.02
641 666 1.524621 CGGACCAGATGCATCCACC 60.525 63.158 23.06 18.09 32.35 4.61
642 667 1.152881 GGACCAGATGCATCCACCC 60.153 63.158 23.06 14.79 32.35 4.61
643 668 1.609239 GACCAGATGCATCCACCCA 59.391 57.895 23.06 0.00 0.00 4.51
644 669 0.749454 GACCAGATGCATCCACCCAC 60.749 60.000 23.06 6.75 0.00 4.61
645 670 1.820906 CCAGATGCATCCACCCACG 60.821 63.158 23.06 3.45 0.00 4.94
646 671 1.820906 CAGATGCATCCACCCACGG 60.821 63.158 23.06 0.00 0.00 4.94
647 672 3.211963 GATGCATCCACCCACGGC 61.212 66.667 16.23 0.00 0.00 5.68
648 673 3.993614 GATGCATCCACCCACGGCA 62.994 63.158 16.23 0.00 39.03 5.69
649 674 3.582242 ATGCATCCACCCACGGCAA 62.582 57.895 0.00 0.00 38.08 4.52
650 675 3.443045 GCATCCACCCACGGCAAG 61.443 66.667 0.00 0.00 0.00 4.01
651 676 3.443045 CATCCACCCACGGCAAGC 61.443 66.667 0.00 0.00 0.00 4.01
652 677 3.965258 ATCCACCCACGGCAAGCA 61.965 61.111 0.00 0.00 0.00 3.91
653 678 4.947147 TCCACCCACGGCAAGCAC 62.947 66.667 0.00 0.00 0.00 4.40
655 680 2.985282 CACCCACGGCAAGCACAT 60.985 61.111 0.00 0.00 0.00 3.21
656 681 2.203480 ACCCACGGCAAGCACATT 60.203 55.556 0.00 0.00 0.00 2.71
657 682 1.074072 ACCCACGGCAAGCACATTA 59.926 52.632 0.00 0.00 0.00 1.90
658 683 0.538516 ACCCACGGCAAGCACATTAA 60.539 50.000 0.00 0.00 0.00 1.40
659 684 0.600557 CCCACGGCAAGCACATTAAA 59.399 50.000 0.00 0.00 0.00 1.52
660 685 1.000283 CCCACGGCAAGCACATTAAAA 60.000 47.619 0.00 0.00 0.00 1.52
661 686 2.546795 CCCACGGCAAGCACATTAAAAA 60.547 45.455 0.00 0.00 0.00 1.94
679 704 4.922026 AAAACAGCCGGACGCCGT 62.922 61.111 5.05 0.00 46.80 5.68
680 705 4.922026 AAACAGCCGGACGCCGTT 62.922 61.111 5.05 0.00 46.80 4.44
683 708 4.124351 CAGCCGGACGCCGTTCTA 62.124 66.667 5.05 0.00 46.80 2.10
684 709 3.145551 AGCCGGACGCCGTTCTAT 61.146 61.111 5.05 0.00 46.80 1.98
685 710 2.202837 GCCGGACGCCGTTCTATT 60.203 61.111 5.05 0.00 46.80 1.73
686 711 2.522638 GCCGGACGCCGTTCTATTG 61.523 63.158 5.05 1.96 46.80 1.90
687 712 2.522638 CCGGACGCCGTTCTATTGC 61.523 63.158 15.38 0.00 46.80 3.56
688 713 2.522638 CGGACGCCGTTCTATTGCC 61.523 63.158 9.69 0.00 42.73 4.52
689 714 2.178235 GGACGCCGTTCTATTGCCC 61.178 63.158 0.00 0.00 0.00 5.36
690 715 1.153429 GACGCCGTTCTATTGCCCT 60.153 57.895 0.00 0.00 0.00 5.19
691 716 0.103572 GACGCCGTTCTATTGCCCTA 59.896 55.000 0.00 0.00 0.00 3.53
692 717 0.756903 ACGCCGTTCTATTGCCCTAT 59.243 50.000 0.00 0.00 0.00 2.57
693 718 1.270147 ACGCCGTTCTATTGCCCTATC 60.270 52.381 0.00 0.00 0.00 2.08
694 719 1.809684 GCCGTTCTATTGCCCTATCC 58.190 55.000 0.00 0.00 0.00 2.59
695 720 1.071699 GCCGTTCTATTGCCCTATCCA 59.928 52.381 0.00 0.00 0.00 3.41
696 721 2.486548 GCCGTTCTATTGCCCTATCCAA 60.487 50.000 0.00 0.00 0.00 3.53
697 722 3.815809 CCGTTCTATTGCCCTATCCAAA 58.184 45.455 0.00 0.00 0.00 3.28
698 723 3.564225 CCGTTCTATTGCCCTATCCAAAC 59.436 47.826 0.00 0.00 0.00 2.93
699 724 4.196193 CGTTCTATTGCCCTATCCAAACA 58.804 43.478 0.00 0.00 0.00 2.83
700 725 4.638421 CGTTCTATTGCCCTATCCAAACAA 59.362 41.667 0.00 0.00 0.00 2.83
701 726 5.124776 CGTTCTATTGCCCTATCCAAACAAA 59.875 40.000 0.00 0.00 0.00 2.83
702 727 6.349777 CGTTCTATTGCCCTATCCAAACAAAA 60.350 38.462 0.00 0.00 0.00 2.44
703 728 6.524101 TCTATTGCCCTATCCAAACAAAAC 57.476 37.500 0.00 0.00 0.00 2.43
704 729 6.013379 TCTATTGCCCTATCCAAACAAAACA 58.987 36.000 0.00 0.00 0.00 2.83
705 730 5.559148 ATTGCCCTATCCAAACAAAACAA 57.441 34.783 0.00 0.00 0.00 2.83
706 731 5.359194 TTGCCCTATCCAAACAAAACAAA 57.641 34.783 0.00 0.00 0.00 2.83
707 732 5.359194 TGCCCTATCCAAACAAAACAAAA 57.641 34.783 0.00 0.00 0.00 2.44
708 733 5.745227 TGCCCTATCCAAACAAAACAAAAA 58.255 33.333 0.00 0.00 0.00 1.94
709 734 6.360618 TGCCCTATCCAAACAAAACAAAAAT 58.639 32.000 0.00 0.00 0.00 1.82
710 735 6.830838 TGCCCTATCCAAACAAAACAAAAATT 59.169 30.769 0.00 0.00 0.00 1.82
711 736 7.012799 TGCCCTATCCAAACAAAACAAAAATTC 59.987 33.333 0.00 0.00 0.00 2.17
712 737 7.012799 GCCCTATCCAAACAAAACAAAAATTCA 59.987 33.333 0.00 0.00 0.00 2.57
713 738 8.558700 CCCTATCCAAACAAAACAAAAATTCAG 58.441 33.333 0.00 0.00 0.00 3.02
714 739 9.323985 CCTATCCAAACAAAACAAAAATTCAGA 57.676 29.630 0.00 0.00 0.00 3.27
716 741 7.371126 TCCAAACAAAACAAAAATTCAGACC 57.629 32.000 0.00 0.00 0.00 3.85
717 742 6.936900 TCCAAACAAAACAAAAATTCAGACCA 59.063 30.769 0.00 0.00 0.00 4.02
718 743 7.445402 TCCAAACAAAACAAAAATTCAGACCAA 59.555 29.630 0.00 0.00 0.00 3.67
719 744 8.078596 CCAAACAAAACAAAAATTCAGACCAAA 58.921 29.630 0.00 0.00 0.00 3.28
720 745 8.900762 CAAACAAAACAAAAATTCAGACCAAAC 58.099 29.630 0.00 0.00 0.00 2.93
721 746 7.977789 ACAAAACAAAAATTCAGACCAAACT 57.022 28.000 0.00 0.00 0.00 2.66
722 747 9.495572 AACAAAACAAAAATTCAGACCAAACTA 57.504 25.926 0.00 0.00 0.00 2.24
723 748 9.150348 ACAAAACAAAAATTCAGACCAAACTAG 57.850 29.630 0.00 0.00 0.00 2.57
724 749 9.150348 CAAAACAAAAATTCAGACCAAACTAGT 57.850 29.630 0.00 0.00 0.00 2.57
725 750 8.702163 AAACAAAAATTCAGACCAAACTAGTG 57.298 30.769 0.00 0.00 0.00 2.74
726 751 7.404671 ACAAAAATTCAGACCAAACTAGTGT 57.595 32.000 0.00 0.00 0.00 3.55
727 752 7.480810 ACAAAAATTCAGACCAAACTAGTGTC 58.519 34.615 0.00 0.00 0.00 3.67
728 753 7.339466 ACAAAAATTCAGACCAAACTAGTGTCT 59.661 33.333 8.22 8.22 39.86 3.41
733 758 5.409643 CAGACCAAACTAGTGTCTGTTTG 57.590 43.478 23.93 12.62 46.85 2.93
737 762 4.813296 CAAACTAGTGTCTGTTTGGGTC 57.187 45.455 0.00 0.00 45.22 4.46
738 763 2.814280 ACTAGTGTCTGTTTGGGTCG 57.186 50.000 0.00 0.00 0.00 4.79
739 764 1.270147 ACTAGTGTCTGTTTGGGTCGC 60.270 52.381 0.00 0.00 0.00 5.19
740 765 0.319211 TAGTGTCTGTTTGGGTCGCG 60.319 55.000 0.00 0.00 0.00 5.87
741 766 1.885850 GTGTCTGTTTGGGTCGCGT 60.886 57.895 5.77 0.00 0.00 6.01
742 767 1.593209 TGTCTGTTTGGGTCGCGTC 60.593 57.895 5.77 0.00 0.00 5.19
743 768 2.355363 TCTGTTTGGGTCGCGTCG 60.355 61.111 5.77 0.00 0.00 5.12
744 769 3.411351 CTGTTTGGGTCGCGTCGG 61.411 66.667 5.77 0.00 0.00 4.79
745 770 3.851845 CTGTTTGGGTCGCGTCGGA 62.852 63.158 5.77 0.00 0.00 4.55
746 771 3.110178 GTTTGGGTCGCGTCGGAG 61.110 66.667 5.77 0.00 0.00 4.63
755 780 4.908877 GCGTCGGAGCTCGGCTAC 62.909 72.222 16.03 9.33 42.07 3.58
756 781 3.203412 CGTCGGAGCTCGGCTACT 61.203 66.667 16.03 0.00 42.07 2.57
757 782 1.886313 CGTCGGAGCTCGGCTACTA 60.886 63.158 16.03 0.00 42.07 1.82
758 783 1.434622 CGTCGGAGCTCGGCTACTAA 61.435 60.000 16.03 0.00 42.07 2.24
759 784 0.953003 GTCGGAGCTCGGCTACTAAT 59.047 55.000 16.03 0.00 39.88 1.73
760 785 1.337387 GTCGGAGCTCGGCTACTAATT 59.663 52.381 16.03 0.00 39.88 1.40
761 786 2.029623 TCGGAGCTCGGCTACTAATTT 58.970 47.619 16.03 0.00 39.88 1.82
762 787 3.004106 GTCGGAGCTCGGCTACTAATTTA 59.996 47.826 16.03 0.00 39.88 1.40
763 788 3.252701 TCGGAGCTCGGCTACTAATTTAG 59.747 47.826 16.03 1.79 39.88 1.85
764 789 3.004524 CGGAGCTCGGCTACTAATTTAGT 59.995 47.826 13.36 13.36 39.88 2.24
771 796 3.746492 CGGCTACTAATTTAGTGATGCCC 59.254 47.826 26.20 16.12 42.47 5.36
773 798 4.757149 GGCTACTAATTTAGTGATGCCCTG 59.243 45.833 24.18 8.33 41.10 4.45
780 805 4.166011 GTGATGCCCTGAACGCGC 62.166 66.667 5.73 0.00 0.00 6.86
795 820 4.512571 TGAACGCGCTAGTACATATCACTA 59.487 41.667 5.73 0.00 0.00 2.74
803 828 4.827036 AGTACATATCACTACCCTCCCA 57.173 45.455 0.00 0.00 0.00 4.37
925 950 4.680237 CGCGCACACCAAGGGAGA 62.680 66.667 8.75 0.00 0.00 3.71
981 1006 3.536917 CGCCGAGGTATCCAGCCA 61.537 66.667 0.00 0.00 0.00 4.75
987 1012 1.068472 CGAGGTATCCAGCCACGATAC 60.068 57.143 0.00 6.81 41.43 2.24
988 1013 2.240279 GAGGTATCCAGCCACGATACT 58.760 52.381 12.57 3.00 41.17 2.12
989 1014 2.229302 GAGGTATCCAGCCACGATACTC 59.771 54.545 12.57 7.01 41.17 2.59
1048 1079 3.713650 CTTCTCCGGAAGCCCAGA 58.286 61.111 5.23 0.00 41.80 3.86
1267 1342 2.408835 GTATGCATGCACGGTGGC 59.591 61.111 25.37 5.90 0.00 5.01
1321 1403 1.104630 GGGCAGTTCTAGCTCTACGT 58.895 55.000 0.00 0.00 0.00 3.57
1338 1420 2.058057 ACGTTTTCATTTGCGGAATGC 58.942 42.857 7.53 0.00 43.93 3.56
1350 1432 1.375523 GGAATGCCGACGGAACAGT 60.376 57.895 20.50 6.06 0.00 3.55
1353 1435 3.605749 ATGCCGACGGAACAGTGGG 62.606 63.158 20.50 2.40 42.03 4.61
1356 1438 1.227734 CCGACGGAACAGTGGGTTT 60.228 57.895 8.64 0.00 40.63 3.27
1360 1442 0.179029 ACGGAACAGTGGGTTTGAGG 60.179 55.000 0.00 0.00 40.63 3.86
1362 1444 0.178990 GGAACAGTGGGTTTGAGGCT 60.179 55.000 0.00 0.00 40.63 4.58
1363 1445 1.692411 GAACAGTGGGTTTGAGGCTT 58.308 50.000 0.00 0.00 40.63 4.35
1365 1447 0.468029 ACAGTGGGTTTGAGGCTTGG 60.468 55.000 0.00 0.00 0.00 3.61
1381 1466 4.280019 GGGCCGGGGTTGTGTCTT 62.280 66.667 2.18 0.00 0.00 3.01
1448 1533 2.288702 CCATTTGGTTGGAAATGTCGCA 60.289 45.455 0.00 0.00 40.36 5.10
1457 1747 0.097674 GAAATGTCGCATCGCAGCTT 59.902 50.000 0.00 0.00 0.00 3.74
1465 1755 3.059570 GTCGCATCGCAGCTTATGTATAC 59.940 47.826 0.00 0.00 0.00 1.47
1466 1756 3.057526 TCGCATCGCAGCTTATGTATACT 60.058 43.478 4.17 0.00 0.00 2.12
1488 1778 5.532779 ACTGGAATTTTGAGAAACTGGAGTC 59.467 40.000 0.00 0.00 0.00 3.36
1506 1800 4.202326 GGAGTCAGGTCTAGGTTTGTTTCA 60.202 45.833 0.00 0.00 0.00 2.69
1532 1826 2.574399 GAGTCAGGTCTGGCCGTC 59.426 66.667 0.00 0.00 43.70 4.79
1535 1829 2.997315 TCAGGTCTGGCCGTCTGG 60.997 66.667 0.00 0.00 43.70 3.86
1536 1830 4.087892 CAGGTCTGGCCGTCTGGG 62.088 72.222 0.00 0.00 43.70 4.45
1537 1831 4.316823 AGGTCTGGCCGTCTGGGA 62.317 66.667 0.00 0.00 43.70 4.37
1540 1834 2.203788 TCTGGCCGTCTGGGAGTT 60.204 61.111 0.00 0.00 38.47 3.01
1541 1835 1.841556 TCTGGCCGTCTGGGAGTTT 60.842 57.895 0.00 0.00 38.47 2.66
1542 1836 1.672356 CTGGCCGTCTGGGAGTTTG 60.672 63.158 0.00 0.00 38.47 2.93
1543 1837 2.359975 GGCCGTCTGGGAGTTTGG 60.360 66.667 0.00 0.00 38.47 3.28
1546 1840 1.515521 GCCGTCTGGGAGTTTGGTTG 61.516 60.000 0.00 0.00 38.47 3.77
1547 1841 0.179029 CCGTCTGGGAGTTTGGTTGT 60.179 55.000 0.00 0.00 38.47 3.32
1548 1842 1.071071 CCGTCTGGGAGTTTGGTTGTA 59.929 52.381 0.00 0.00 38.47 2.41
1549 1843 2.413837 CGTCTGGGAGTTTGGTTGTAG 58.586 52.381 0.00 0.00 0.00 2.74
1551 1845 3.743269 CGTCTGGGAGTTTGGTTGTAGTT 60.743 47.826 0.00 0.00 0.00 2.24
1552 1846 3.564225 GTCTGGGAGTTTGGTTGTAGTTG 59.436 47.826 0.00 0.00 0.00 3.16
1553 1847 3.456644 TCTGGGAGTTTGGTTGTAGTTGA 59.543 43.478 0.00 0.00 0.00 3.18
1564 1858 7.786046 TTGGTTGTAGTTGACTATCCTTAGA 57.214 36.000 0.00 0.00 0.00 2.10
1567 1861 8.311836 TGGTTGTAGTTGACTATCCTTAGAAAG 58.688 37.037 0.00 0.00 0.00 2.62
1617 1911 6.532657 GGCTTTGTTGATTTATTCCTGATGTG 59.467 38.462 0.00 0.00 0.00 3.21
1620 1914 8.815141 TTTGTTGATTTATTCCTGATGTGTTG 57.185 30.769 0.00 0.00 0.00 3.33
1752 2048 5.869579 AGTTCCTGCAGTTCATTAAGAAGA 58.130 37.500 13.81 0.00 36.78 2.87
1787 2083 7.309012 GGTCCAGTTTATAAGGAAAACCTGAAC 60.309 40.741 0.00 0.00 37.51 3.18
1794 2090 8.541899 TTATAAGGAAAACCTGAACCAAAAGT 57.458 30.769 0.00 0.00 0.00 2.66
1809 2105 6.388619 ACCAAAAGTCTAACATATCCCAGT 57.611 37.500 0.00 0.00 0.00 4.00
1836 2132 2.793288 GGGAACCGAGATAAAACCCA 57.207 50.000 0.00 0.00 40.86 4.51
1948 2247 1.664659 CCGAGAAGATGCTGCTTTCTG 59.335 52.381 15.59 9.89 0.00 3.02
1996 2469 7.299896 TGTAGCCCATCTGTACTATACCTTAA 58.700 38.462 0.00 0.00 0.00 1.85
2311 2789 6.778834 TTATTGATCTTGTGAATGTGGCAT 57.221 33.333 0.00 0.00 0.00 4.40
2568 3047 8.948631 ATTTGACGTTGATAGTATGTCTGATT 57.051 30.769 0.00 0.00 33.64 2.57
2755 3235 2.126346 GCGCACTTTGGCATGACC 60.126 61.111 0.30 0.00 39.84 4.02
2901 3383 9.359653 CACTCCTGGAGATGGAATAAAATATTT 57.640 33.333 29.71 0.00 33.32 1.40
3050 3534 9.182214 ACACATAATCTGTCAGCTATTTTGATT 57.818 29.630 9.97 5.45 35.29 2.57
3106 3593 4.580167 ACTAGCTGCTGTTCAATGTTTGAA 59.420 37.500 13.43 0.00 46.68 2.69
3146 3633 3.619038 CGCTGTATTTTCTCAGGGTTCTC 59.381 47.826 0.00 0.00 38.96 2.87
3507 3994 6.206634 TGAACTTTCTACAATGCTTGGTAAGG 59.793 38.462 0.00 0.00 34.12 2.69
3602 4089 2.239400 TGAGACGTGAATCAGAGTGGT 58.761 47.619 0.00 0.00 0.00 4.16
3666 4155 1.980765 AGTGCATTGTCTGGAGGAGAA 59.019 47.619 0.00 0.00 30.26 2.87
3667 4156 2.575279 AGTGCATTGTCTGGAGGAGAAT 59.425 45.455 0.00 0.00 38.27 2.40
3710 4200 6.102663 ACCGAGAAATGATTCAGTGTAGAAG 58.897 40.000 0.00 0.00 38.06 2.85
3715 4205 7.907389 AGAAATGATTCAGTGTAGAAGTACCA 58.093 34.615 0.00 0.00 38.06 3.25
3719 4209 5.719563 TGATTCAGTGTAGAAGTACCATGGA 59.280 40.000 21.47 0.00 0.00 3.41
3751 4241 4.685169 ATCACGCCATGTTCTAAACTTG 57.315 40.909 0.00 0.18 36.58 3.16
3770 4260 8.558973 AAACTTGAGTTAAGATCTCTGGATTG 57.441 34.615 0.99 0.00 39.76 2.67
3794 4284 2.905075 GCAGGGTTCTTTGCTTTGTTT 58.095 42.857 0.00 0.00 37.35 2.83
3875 4365 5.945310 TCCTTAATAGATGAGGCAGCATTT 58.055 37.500 0.00 0.00 0.00 2.32
4070 4560 7.509141 ACAGATTTGTATCACATGTGTCAAA 57.491 32.000 28.62 28.62 35.25 2.69
4099 4589 3.000041 TGCACTGCTACCGAAATAACTG 59.000 45.455 1.98 0.00 0.00 3.16
4138 4628 7.255242 CCTTTCATTACACACTTTGATGTCAGT 60.255 37.037 0.00 0.00 0.00 3.41
4187 4677 6.964934 GTGTTATGTTTGTCTTTTCGTTCTGT 59.035 34.615 0.00 0.00 0.00 3.41
4188 4678 7.483691 GTGTTATGTTTGTCTTTTCGTTCTGTT 59.516 33.333 0.00 0.00 0.00 3.16
4189 4679 8.666573 TGTTATGTTTGTCTTTTCGTTCTGTTA 58.333 29.630 0.00 0.00 0.00 2.41
4561 5051 9.778741 TTCAACTTCATGTCTATCAAACTTACT 57.221 29.630 0.00 0.00 0.00 2.24
4698 5188 4.189639 AGTGTAGCTGCTTTGTACCTAC 57.810 45.455 7.79 0.00 0.00 3.18
4699 5189 3.576982 AGTGTAGCTGCTTTGTACCTACA 59.423 43.478 7.79 0.00 36.85 2.74
4700 5190 3.927142 GTGTAGCTGCTTTGTACCTACAG 59.073 47.826 7.79 2.99 39.03 2.74
4701 5191 3.576982 TGTAGCTGCTTTGTACCTACAGT 59.423 43.478 7.79 0.00 37.52 3.55
4702 5192 4.768448 TGTAGCTGCTTTGTACCTACAGTA 59.232 41.667 7.79 0.00 37.52 2.74
4707 5197 7.565680 AGCTGCTTTGTACCTACAGTATAAAT 58.434 34.615 0.00 0.00 40.13 1.40
4726 5216 7.798596 ATAAATCAGCAGTTGGTTCTGATAG 57.201 36.000 4.64 0.00 44.21 2.08
4773 5263 4.938226 GGCCTATATGCTACCATTGTTCTC 59.062 45.833 0.00 0.00 32.85 2.87
4787 5277 5.528690 CCATTGTTCTCTGTGTCTTTCAGAA 59.471 40.000 0.00 0.00 40.68 3.02
4788 5278 6.293298 CCATTGTTCTCTGTGTCTTTCAGAAG 60.293 42.308 0.00 0.00 40.68 2.85
4858 5351 1.227943 CAGATATGCCACCACCGGG 60.228 63.158 6.32 0.00 41.29 5.73
4884 5377 0.835276 CCATCTCATCAGTGGAGCCA 59.165 55.000 0.00 0.00 34.94 4.75
4909 5402 8.798153 CAGACATCAAACAAACTTTTTCAGTAC 58.202 33.333 0.00 0.00 32.94 2.73
4910 5403 8.739972 AGACATCAAACAAACTTTTTCAGTACT 58.260 29.630 0.00 0.00 32.94 2.73
4911 5404 8.911247 ACATCAAACAAACTTTTTCAGTACTC 57.089 30.769 0.00 0.00 32.94 2.59
4912 5405 7.973944 ACATCAAACAAACTTTTTCAGTACTCC 59.026 33.333 0.00 0.00 32.94 3.85
4913 5406 6.859017 TCAAACAAACTTTTTCAGTACTCCC 58.141 36.000 0.00 0.00 32.94 4.30
4914 5407 6.661805 TCAAACAAACTTTTTCAGTACTCCCT 59.338 34.615 0.00 0.00 32.94 4.20
4915 5408 6.694877 AACAAACTTTTTCAGTACTCCCTC 57.305 37.500 0.00 0.00 32.94 4.30
4916 5409 5.131067 ACAAACTTTTTCAGTACTCCCTCC 58.869 41.667 0.00 0.00 32.94 4.30
4917 5410 3.679824 ACTTTTTCAGTACTCCCTCCG 57.320 47.619 0.00 0.00 31.97 4.63
4918 5411 2.970640 ACTTTTTCAGTACTCCCTCCGT 59.029 45.455 0.00 0.00 31.97 4.69
4919 5412 3.006644 ACTTTTTCAGTACTCCCTCCGTC 59.993 47.826 0.00 0.00 31.97 4.79
4920 5413 1.553706 TTTCAGTACTCCCTCCGTCC 58.446 55.000 0.00 0.00 0.00 4.79
4921 5414 0.679002 TTCAGTACTCCCTCCGTCCG 60.679 60.000 0.00 0.00 0.00 4.79
4922 5415 1.077930 CAGTACTCCCTCCGTCCGA 60.078 63.158 0.00 0.00 0.00 4.55
4923 5416 0.679002 CAGTACTCCCTCCGTCCGAA 60.679 60.000 0.00 0.00 0.00 4.30
4924 5417 0.394080 AGTACTCCCTCCGTCCGAAG 60.394 60.000 0.00 0.00 0.00 3.79
4925 5418 0.393537 GTACTCCCTCCGTCCGAAGA 60.394 60.000 0.00 0.00 0.00 2.87
4926 5419 0.329261 TACTCCCTCCGTCCGAAGAA 59.671 55.000 0.00 0.00 0.00 2.52
4927 5420 0.541296 ACTCCCTCCGTCCGAAGAAA 60.541 55.000 0.00 0.00 0.00 2.52
4928 5421 0.108756 CTCCCTCCGTCCGAAGAAAC 60.109 60.000 0.00 0.00 0.00 2.78
4929 5422 0.541296 TCCCTCCGTCCGAAGAAACT 60.541 55.000 0.00 0.00 0.00 2.66
4930 5423 0.320697 CCCTCCGTCCGAAGAAACTT 59.679 55.000 0.00 0.00 0.00 2.66
4931 5424 1.429463 CCTCCGTCCGAAGAAACTTG 58.571 55.000 0.00 0.00 0.00 3.16
4932 5425 0.790814 CTCCGTCCGAAGAAACTTGC 59.209 55.000 0.00 0.00 0.00 4.01
4933 5426 0.601841 TCCGTCCGAAGAAACTTGCC 60.602 55.000 0.00 0.00 0.00 4.52
4934 5427 1.574702 CCGTCCGAAGAAACTTGCCC 61.575 60.000 0.00 0.00 0.00 5.36
4935 5428 1.574702 CGTCCGAAGAAACTTGCCCC 61.575 60.000 0.00 0.00 0.00 5.80
4936 5429 0.536460 GTCCGAAGAAACTTGCCCCA 60.536 55.000 0.00 0.00 0.00 4.96
4937 5430 0.183971 TCCGAAGAAACTTGCCCCAA 59.816 50.000 0.00 0.00 0.00 4.12
4938 5431 0.598065 CCGAAGAAACTTGCCCCAAG 59.402 55.000 3.57 3.57 45.85 3.61
4939 5432 0.039165 CGAAGAAACTTGCCCCAAGC 60.039 55.000 4.96 0.00 44.43 4.01
4940 5433 1.332195 GAAGAAACTTGCCCCAAGCT 58.668 50.000 4.96 0.00 44.43 3.74
4941 5434 1.688735 GAAGAAACTTGCCCCAAGCTT 59.311 47.619 0.00 0.00 44.43 3.74
4942 5435 1.043022 AGAAACTTGCCCCAAGCTTG 58.957 50.000 19.93 19.93 44.43 4.01
4943 5436 0.752658 GAAACTTGCCCCAAGCTTGT 59.247 50.000 24.35 2.82 44.43 3.16
4944 5437 1.138859 GAAACTTGCCCCAAGCTTGTT 59.861 47.619 24.35 9.82 44.43 2.83
4945 5438 0.752658 AACTTGCCCCAAGCTTGTTC 59.247 50.000 24.35 13.13 44.43 3.18
4946 5439 1.115326 ACTTGCCCCAAGCTTGTTCC 61.115 55.000 24.35 12.18 44.43 3.62
4947 5440 0.829182 CTTGCCCCAAGCTTGTTCCT 60.829 55.000 24.35 0.00 44.23 3.36
4948 5441 0.827507 TTGCCCCAAGCTTGTTCCTC 60.828 55.000 24.35 9.53 44.23 3.71
4949 5442 1.228552 GCCCCAAGCTTGTTCCTCA 60.229 57.895 24.35 0.00 38.99 3.86
4950 5443 0.827507 GCCCCAAGCTTGTTCCTCAA 60.828 55.000 24.35 0.00 38.99 3.02
4951 5444 1.703411 CCCCAAGCTTGTTCCTCAAA 58.297 50.000 24.35 0.00 35.48 2.69
4952 5445 2.250924 CCCCAAGCTTGTTCCTCAAAT 58.749 47.619 24.35 0.00 35.48 2.32
4953 5446 3.430453 CCCCAAGCTTGTTCCTCAAATA 58.570 45.455 24.35 0.00 35.48 1.40
4954 5447 3.445096 CCCCAAGCTTGTTCCTCAAATAG 59.555 47.826 24.35 4.97 35.48 1.73
4955 5448 4.335416 CCCAAGCTTGTTCCTCAAATAGA 58.665 43.478 24.35 0.00 35.48 1.98
4956 5449 4.952335 CCCAAGCTTGTTCCTCAAATAGAT 59.048 41.667 24.35 0.00 35.48 1.98
4957 5450 5.163581 CCCAAGCTTGTTCCTCAAATAGATG 60.164 44.000 24.35 3.72 35.48 2.90
4958 5451 5.416952 CCAAGCTTGTTCCTCAAATAGATGT 59.583 40.000 24.35 0.00 35.48 3.06
4959 5452 6.599244 CCAAGCTTGTTCCTCAAATAGATGTA 59.401 38.462 24.35 0.00 35.48 2.29
4960 5453 7.284034 CCAAGCTTGTTCCTCAAATAGATGTAT 59.716 37.037 24.35 0.00 35.48 2.29
4961 5454 8.341173 CAAGCTTGTTCCTCAAATAGATGTATC 58.659 37.037 18.65 0.00 35.48 2.24
4962 5455 7.800092 AGCTTGTTCCTCAAATAGATGTATCT 58.200 34.615 0.00 0.00 36.97 1.98
4963 5456 8.928448 AGCTTGTTCCTCAAATAGATGTATCTA 58.072 33.333 4.22 4.22 36.64 1.98
4964 5457 9.547753 GCTTGTTCCTCAAATAGATGTATCTAA 57.452 33.333 5.75 0.00 36.26 2.10
4967 5460 9.817809 TGTTCCTCAAATAGATGTATCTAACAC 57.182 33.333 5.75 0.00 42.09 3.32
4978 5471 7.042335 AGATGTATCTAACACTAACTTGGTGC 58.958 38.462 5.24 0.00 42.09 5.01
4979 5472 6.354794 TGTATCTAACACTAACTTGGTGCT 57.645 37.500 5.24 0.00 38.14 4.40
4980 5473 7.470935 TGTATCTAACACTAACTTGGTGCTA 57.529 36.000 5.24 0.00 38.14 3.49
4981 5474 7.544622 TGTATCTAACACTAACTTGGTGCTAG 58.455 38.462 5.24 7.17 38.14 3.42
4982 5475 6.852420 ATCTAACACTAACTTGGTGCTAGA 57.148 37.500 16.37 16.37 42.56 2.43
4983 5476 6.852420 TCTAACACTAACTTGGTGCTAGAT 57.148 37.500 12.12 0.00 37.42 1.98
4984 5477 7.949690 TCTAACACTAACTTGGTGCTAGATA 57.050 36.000 12.12 0.00 37.42 1.98
4985 5478 7.769220 TCTAACACTAACTTGGTGCTAGATAC 58.231 38.462 12.12 0.00 37.42 2.24
4986 5479 5.995565 ACACTAACTTGGTGCTAGATACA 57.004 39.130 5.24 0.00 38.14 2.29
4987 5480 6.546428 ACACTAACTTGGTGCTAGATACAT 57.454 37.500 5.24 0.00 38.14 2.29
4988 5481 6.574350 ACACTAACTTGGTGCTAGATACATC 58.426 40.000 5.24 0.00 38.14 3.06
4989 5482 5.986135 CACTAACTTGGTGCTAGATACATCC 59.014 44.000 0.00 0.00 0.00 3.51
4990 5483 5.661312 ACTAACTTGGTGCTAGATACATCCA 59.339 40.000 0.00 0.00 0.00 3.41
4991 5484 5.636903 AACTTGGTGCTAGATACATCCAT 57.363 39.130 0.00 0.00 0.00 3.41
4992 5485 5.636903 ACTTGGTGCTAGATACATCCATT 57.363 39.130 0.00 0.00 0.00 3.16
4993 5486 6.006275 ACTTGGTGCTAGATACATCCATTT 57.994 37.500 0.00 0.00 0.00 2.32
4994 5487 5.824624 ACTTGGTGCTAGATACATCCATTTG 59.175 40.000 0.00 0.00 0.00 2.32
4995 5488 5.628797 TGGTGCTAGATACATCCATTTGA 57.371 39.130 0.00 0.00 0.00 2.69
4996 5489 6.000246 TGGTGCTAGATACATCCATTTGAA 58.000 37.500 0.00 0.00 0.00 2.69
4997 5490 6.057533 TGGTGCTAGATACATCCATTTGAAG 58.942 40.000 0.00 0.00 0.00 3.02
4998 5491 5.471456 GGTGCTAGATACATCCATTTGAAGG 59.529 44.000 0.00 0.00 0.00 3.46
4999 5492 6.291377 GTGCTAGATACATCCATTTGAAGGA 58.709 40.000 0.00 0.00 39.97 3.36
5000 5493 6.203723 GTGCTAGATACATCCATTTGAAGGAC 59.796 42.308 0.00 0.00 38.13 3.85
5001 5494 6.126796 TGCTAGATACATCCATTTGAAGGACA 60.127 38.462 0.00 0.00 38.13 4.02
5002 5495 6.767902 GCTAGATACATCCATTTGAAGGACAA 59.232 38.462 0.00 0.00 38.13 3.18
5003 5496 7.041508 GCTAGATACATCCATTTGAAGGACAAG 60.042 40.741 0.00 0.00 39.77 3.16
5004 5497 6.725364 AGATACATCCATTTGAAGGACAAGT 58.275 36.000 0.00 0.00 39.77 3.16
5005 5498 7.177878 AGATACATCCATTTGAAGGACAAGTT 58.822 34.615 0.00 0.00 39.77 2.66
5006 5499 7.671398 AGATACATCCATTTGAAGGACAAGTTT 59.329 33.333 0.00 0.00 39.77 2.66
5007 5500 6.484364 ACATCCATTTGAAGGACAAGTTTT 57.516 33.333 0.00 0.00 39.77 2.43
5008 5501 6.888105 ACATCCATTTGAAGGACAAGTTTTT 58.112 32.000 0.00 0.00 39.77 1.94
5024 5517 1.631405 TTTTTCGGACGGAGGGACTA 58.369 50.000 0.00 0.00 41.55 2.59
5135 5635 8.178964 TGTTGTATTTTTCTTGGTATATCACGC 58.821 33.333 0.00 0.00 0.00 5.34
5170 5675 0.381801 GGTTCTGTTGTGTGCCACTG 59.618 55.000 0.00 0.00 35.11 3.66
5177 5682 1.798234 TTGTGTGCCACTGCTGCATC 61.798 55.000 1.31 0.00 41.46 3.91
5191 5696 2.019249 CTGCATCCGGTGAAATGTGAT 58.981 47.619 0.00 0.00 0.00 3.06
5273 5778 5.032863 GCTGTCATTCTGTATGAAATGCAC 58.967 41.667 0.00 0.00 44.62 4.57
5301 5806 3.679917 CGGACTGCCACATTTACAGATCT 60.680 47.826 0.00 0.00 35.38 2.75
5302 5807 4.441495 CGGACTGCCACATTTACAGATCTA 60.441 45.833 0.00 0.00 35.38 1.98
5306 5811 7.067494 GGACTGCCACATTTACAGATCTAAAAT 59.933 37.037 0.00 2.13 35.38 1.82
5360 5865 8.184192 ACATTGCCTCGTATTTTCTTTATCTTG 58.816 33.333 0.00 0.00 0.00 3.02
5364 5869 7.552687 TGCCTCGTATTTTCTTTATCTTGATGT 59.447 33.333 0.00 0.00 0.00 3.06
5394 5899 2.939460 ATCCAAAATGCCGCTGTTAC 57.061 45.000 0.00 0.00 0.00 2.50
5429 5934 6.016108 TGTTCATCATGTGCTTCTTTTGATGA 60.016 34.615 9.23 9.23 46.53 2.92
5484 5989 7.441157 CAGTTCAACAGGACATTTCAGTTACTA 59.559 37.037 0.00 0.00 0.00 1.82
5485 5990 7.441458 AGTTCAACAGGACATTTCAGTTACTAC 59.559 37.037 0.00 0.00 0.00 2.73
5509 6019 5.531198 TGGTACCCCTTCTTAATGCTACTA 58.469 41.667 10.07 0.00 0.00 1.82
5510 6020 6.148186 TGGTACCCCTTCTTAATGCTACTAT 58.852 40.000 10.07 0.00 0.00 2.12
5511 6021 6.042781 TGGTACCCCTTCTTAATGCTACTATG 59.957 42.308 10.07 0.00 0.00 2.23
5513 6023 6.176014 ACCCCTTCTTAATGCTACTATGAC 57.824 41.667 0.00 0.00 0.00 3.06
5514 6024 5.665812 ACCCCTTCTTAATGCTACTATGACA 59.334 40.000 0.00 0.00 0.00 3.58
5515 6025 6.183361 ACCCCTTCTTAATGCTACTATGACAG 60.183 42.308 0.00 0.00 0.00 3.51
5518 6028 6.463614 CCTTCTTAATGCTACTATGACAGGCT 60.464 42.308 0.00 0.00 0.00 4.58
5519 6029 7.255977 CCTTCTTAATGCTACTATGACAGGCTA 60.256 40.741 0.00 0.00 0.00 3.93
5528 6039 8.523658 TGCTACTATGACAGGCTATATACTTTG 58.476 37.037 0.00 0.00 0.00 2.77
5529 6040 7.489757 GCTACTATGACAGGCTATATACTTTGC 59.510 40.741 0.00 0.00 0.00 3.68
5539 6050 5.106396 GGCTATATACTTTGCCAGCATTCAG 60.106 44.000 5.98 0.00 44.34 3.02
5573 6084 4.713814 TCTCAACTTCCATCAGAGCATACT 59.286 41.667 0.00 0.00 0.00 2.12
5585 6096 7.395617 CATCAGAGCATACTAGGTAGGTAGTA 58.604 42.308 0.00 0.00 39.33 1.82
5586 6097 7.006865 TCAGAGCATACTAGGTAGGTAGTAG 57.993 44.000 0.00 0.00 38.58 2.57
5587 6098 6.558014 TCAGAGCATACTAGGTAGGTAGTAGT 59.442 42.308 0.00 0.00 38.58 2.73
5588 6099 6.651643 CAGAGCATACTAGGTAGGTAGTAGTG 59.348 46.154 0.00 0.00 38.58 2.74
5589 6100 5.315348 AGCATACTAGGTAGGTAGTAGTGC 58.685 45.833 0.00 12.57 38.58 4.40
5590 6101 4.458642 GCATACTAGGTAGGTAGTAGTGCC 59.541 50.000 0.00 0.00 38.58 5.01
5591 6102 3.591695 ACTAGGTAGGTAGTAGTGCCC 57.408 52.381 0.33 0.00 31.14 5.36
5592 6103 2.854967 ACTAGGTAGGTAGTAGTGCCCA 59.145 50.000 0.33 0.00 31.14 5.36
5593 6104 2.456073 AGGTAGGTAGTAGTGCCCAG 57.544 55.000 0.33 0.00 0.00 4.45
5594 6105 0.751452 GGTAGGTAGTAGTGCCCAGC 59.249 60.000 0.33 0.00 0.00 4.85
5595 6106 0.751452 GTAGGTAGTAGTGCCCAGCC 59.249 60.000 0.33 0.00 0.00 4.85
5596 6107 0.635009 TAGGTAGTAGTGCCCAGCCT 59.365 55.000 0.33 0.00 0.00 4.58
5597 6108 0.635009 AGGTAGTAGTGCCCAGCCTA 59.365 55.000 0.33 0.00 0.00 3.93
5598 6109 1.007963 AGGTAGTAGTGCCCAGCCTAA 59.992 52.381 0.33 0.00 0.00 2.69
5599 6110 1.835531 GGTAGTAGTGCCCAGCCTAAA 59.164 52.381 0.00 0.00 0.00 1.85
5600 6111 2.237893 GGTAGTAGTGCCCAGCCTAAAA 59.762 50.000 0.00 0.00 0.00 1.52
5601 6112 2.789409 AGTAGTGCCCAGCCTAAAAG 57.211 50.000 0.00 0.00 0.00 2.27
5602 6113 1.282157 AGTAGTGCCCAGCCTAAAAGG 59.718 52.381 0.00 0.00 38.80 3.11
5618 6129 6.507023 CCTAAAAGGGCTATGCACAAAATAG 58.493 40.000 0.00 0.00 32.33 1.73
5659 6171 6.095440 GGCACTAGCATTTGGAGAAAAGAATA 59.905 38.462 0.00 0.00 44.61 1.75
5668 6180 7.931578 TTTGGAGAAAAGAATAAGCGGATAA 57.068 32.000 0.00 0.00 0.00 1.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.307098 CTCAAAGTTGACCTCTGGGGAT 59.693 50.000 0.00 0.00 38.76 3.85
26 27 2.556622 CCCTTGTTGTAATGGTGGTCAC 59.443 50.000 0.00 0.00 0.00 3.67
55 56 7.563188 CCACTAAGGATAGATACCATCAGCTAT 59.437 40.741 0.00 0.00 41.22 2.97
76 77 4.404394 TGTCTTCACAAGAGTTGACCACTA 59.596 41.667 0.00 0.00 38.41 2.74
108 109 6.553100 ACTTCTATCTATTCTCTCCTTGTGGG 59.447 42.308 0.00 0.00 0.00 4.61
111 112 7.984617 GCAAACTTCTATCTATTCTCTCCTTGT 59.015 37.037 0.00 0.00 0.00 3.16
123 124 8.325787 TCTTACATTTGGGCAAACTTCTATCTA 58.674 33.333 0.00 0.00 32.51 1.98
131 132 3.005791 GCACTCTTACATTTGGGCAAACT 59.994 43.478 0.00 0.00 32.51 2.66
145 146 3.706594 CCACATCCTTCCTAGCACTCTTA 59.293 47.826 0.00 0.00 0.00 2.10
170 173 1.363807 GAGGCACACCAAAAGCACC 59.636 57.895 0.00 0.00 39.06 5.01
186 190 1.536922 CGACACCCCATCGAGATTGAG 60.537 57.143 0.00 0.00 42.25 3.02
203 207 0.814010 AGTGCAGGGTGTCAAACGAC 60.814 55.000 0.00 0.00 0.00 4.34
209 213 0.250424 CATGTCAGTGCAGGGTGTCA 60.250 55.000 0.00 0.00 0.00 3.58
342 348 1.133025 CGCCCAGGCTCTAACATTTTG 59.867 52.381 7.17 0.00 39.32 2.44
346 352 2.190578 GCGCCCAGGCTCTAACAT 59.809 61.111 7.17 0.00 39.32 2.71
347 353 4.096003 GGCGCCCAGGCTCTAACA 62.096 66.667 18.11 0.00 42.90 2.41
348 354 3.622060 TTGGCGCCCAGGCTCTAAC 62.622 63.158 26.77 0.00 46.88 2.34
349 355 3.326578 TTGGCGCCCAGGCTCTAA 61.327 61.111 26.77 5.59 46.88 2.10
359 365 2.981350 TTTCCGGTTCTTGGCGCC 60.981 61.111 22.73 22.73 0.00 6.53
362 371 0.382873 AAACGTTTCCGGTTCTTGGC 59.617 50.000 7.96 0.00 40.81 4.52
374 383 2.820787 TGGGTGAACTGTTGAAACGTTT 59.179 40.909 14.57 14.57 0.00 3.60
382 391 6.375174 TCATGATAGAATTGGGTGAACTGTTG 59.625 38.462 0.00 0.00 0.00 3.33
429 452 2.880268 CACATGAGCTCAACCAAGTCAA 59.120 45.455 22.50 0.00 0.00 3.18
460 483 3.191669 TCGATACATTTACTGGTTGCCG 58.808 45.455 0.00 0.00 0.00 5.69
560 585 9.595823 ACGAACTATACACATTGTAAATAGCTT 57.404 29.630 13.56 9.34 36.31 3.74
581 606 9.872757 CCCATGTATTGTATACATTTTACGAAC 57.127 33.333 6.36 0.00 36.13 3.95
582 607 9.833917 TCCCATGTATTGTATACATTTTACGAA 57.166 29.630 6.36 0.00 36.13 3.85
587 612 9.300681 CTGGATCCCATGTATTGTATACATTTT 57.699 33.333 9.90 0.00 36.13 1.82
588 613 7.394359 GCTGGATCCCATGTATTGTATACATTT 59.606 37.037 9.90 0.27 36.13 2.32
589 614 6.886459 GCTGGATCCCATGTATTGTATACATT 59.114 38.462 9.90 5.94 36.13 2.71
590 615 6.012596 TGCTGGATCCCATGTATTGTATACAT 60.013 38.462 9.90 6.52 38.57 2.29
591 616 5.309282 TGCTGGATCCCATGTATTGTATACA 59.691 40.000 9.90 0.08 30.82 2.29
592 617 5.804639 TGCTGGATCCCATGTATTGTATAC 58.195 41.667 9.90 0.00 30.82 1.47
593 618 5.547666 ACTGCTGGATCCCATGTATTGTATA 59.452 40.000 9.90 0.00 30.82 1.47
594 619 4.352001 ACTGCTGGATCCCATGTATTGTAT 59.648 41.667 9.90 0.00 30.82 2.29
595 620 3.716353 ACTGCTGGATCCCATGTATTGTA 59.284 43.478 9.90 0.00 30.82 2.41
596 621 2.511218 ACTGCTGGATCCCATGTATTGT 59.489 45.455 9.90 0.00 30.82 2.71
597 622 3.219176 ACTGCTGGATCCCATGTATTG 57.781 47.619 9.90 0.00 30.82 1.90
598 623 3.053395 ACAACTGCTGGATCCCATGTATT 60.053 43.478 9.90 0.00 30.82 1.89
599 624 2.511218 ACAACTGCTGGATCCCATGTAT 59.489 45.455 9.90 0.00 30.82 2.29
600 625 1.915489 ACAACTGCTGGATCCCATGTA 59.085 47.619 9.90 0.00 30.82 2.29
601 626 0.700564 ACAACTGCTGGATCCCATGT 59.299 50.000 9.90 0.46 30.82 3.21
602 627 1.386533 GACAACTGCTGGATCCCATG 58.613 55.000 9.90 0.40 30.82 3.66
603 628 0.107508 CGACAACTGCTGGATCCCAT 60.108 55.000 9.90 0.00 30.82 4.00
604 629 1.296392 CGACAACTGCTGGATCCCA 59.704 57.895 9.90 0.00 0.00 4.37
605 630 2.109126 GCGACAACTGCTGGATCCC 61.109 63.158 9.90 0.00 0.00 3.85
606 631 2.456119 CGCGACAACTGCTGGATCC 61.456 63.158 4.20 4.20 0.00 3.36
607 632 2.456119 CCGCGACAACTGCTGGATC 61.456 63.158 8.23 0.00 0.00 3.36
608 633 2.434884 CCGCGACAACTGCTGGAT 60.435 61.111 8.23 0.00 0.00 3.41
609 634 3.611674 TCCGCGACAACTGCTGGA 61.612 61.111 8.23 0.00 34.35 3.86
610 635 3.414700 GTCCGCGACAACTGCTGG 61.415 66.667 8.23 0.00 32.09 4.85
611 636 3.414700 GGTCCGCGACAACTGCTG 61.415 66.667 8.23 0.00 33.68 4.41
612 637 3.865929 CTGGTCCGCGACAACTGCT 62.866 63.158 8.23 0.00 33.68 4.24
613 638 3.414700 CTGGTCCGCGACAACTGC 61.415 66.667 8.23 0.00 33.68 4.40
614 639 1.079819 ATCTGGTCCGCGACAACTG 60.080 57.895 8.23 0.00 33.68 3.16
615 640 1.079819 CATCTGGTCCGCGACAACT 60.080 57.895 8.23 0.00 33.68 3.16
616 641 2.740714 GCATCTGGTCCGCGACAAC 61.741 63.158 8.23 2.17 33.68 3.32
617 642 2.434185 GCATCTGGTCCGCGACAA 60.434 61.111 8.23 0.00 33.68 3.18
618 643 2.906182 GATGCATCTGGTCCGCGACA 62.906 60.000 19.70 2.30 33.68 4.35
619 644 2.202932 ATGCATCTGGTCCGCGAC 60.203 61.111 8.23 3.56 0.00 5.19
620 645 2.106938 GATGCATCTGGTCCGCGA 59.893 61.111 19.70 0.00 0.00 5.87
621 646 2.969238 GGATGCATCTGGTCCGCG 60.969 66.667 25.28 0.00 0.00 6.46
622 647 2.182842 GTGGATGCATCTGGTCCGC 61.183 63.158 25.28 13.49 35.62 5.54
623 648 1.524621 GGTGGATGCATCTGGTCCG 60.525 63.158 25.28 0.00 34.72 4.79
624 649 1.152881 GGGTGGATGCATCTGGTCC 60.153 63.158 25.28 19.66 0.00 4.46
625 650 0.749454 GTGGGTGGATGCATCTGGTC 60.749 60.000 25.28 9.96 0.00 4.02
626 651 1.304282 GTGGGTGGATGCATCTGGT 59.696 57.895 25.28 0.00 0.00 4.00
627 652 1.820906 CGTGGGTGGATGCATCTGG 60.821 63.158 25.28 4.55 0.00 3.86
628 653 1.820906 CCGTGGGTGGATGCATCTG 60.821 63.158 25.28 7.52 0.00 2.90
629 654 2.591753 CCGTGGGTGGATGCATCT 59.408 61.111 25.28 0.00 0.00 2.90
630 655 3.211963 GCCGTGGGTGGATGCATC 61.212 66.667 18.81 18.81 0.00 3.91
631 656 3.582242 TTGCCGTGGGTGGATGCAT 62.582 57.895 0.00 0.00 0.00 3.96
632 657 4.277009 TTGCCGTGGGTGGATGCA 62.277 61.111 0.00 0.00 0.00 3.96
633 658 3.443045 CTTGCCGTGGGTGGATGC 61.443 66.667 0.00 0.00 0.00 3.91
634 659 3.443045 GCTTGCCGTGGGTGGATG 61.443 66.667 0.00 0.00 0.00 3.51
635 660 3.965258 TGCTTGCCGTGGGTGGAT 61.965 61.111 0.00 0.00 0.00 3.41
636 661 4.947147 GTGCTTGCCGTGGGTGGA 62.947 66.667 0.00 0.00 0.00 4.02
638 663 1.240641 TAATGTGCTTGCCGTGGGTG 61.241 55.000 0.00 0.00 0.00 4.61
639 664 0.538516 TTAATGTGCTTGCCGTGGGT 60.539 50.000 0.00 0.00 0.00 4.51
640 665 0.600557 TTTAATGTGCTTGCCGTGGG 59.399 50.000 0.00 0.00 0.00 4.61
641 666 2.430546 TTTTAATGTGCTTGCCGTGG 57.569 45.000 0.00 0.00 0.00 4.94
661 686 3.656045 CGGCGTCCGGCTGTTTTT 61.656 61.111 11.52 0.00 44.15 1.94
671 696 2.178235 GGGCAATAGAACGGCGTCC 61.178 63.158 15.17 8.22 0.00 4.79
672 697 0.103572 TAGGGCAATAGAACGGCGTC 59.896 55.000 15.17 7.22 0.00 5.19
673 698 0.756903 ATAGGGCAATAGAACGGCGT 59.243 50.000 6.77 6.77 0.00 5.68
674 699 1.429463 GATAGGGCAATAGAACGGCG 58.571 55.000 4.80 4.80 0.00 6.46
675 700 1.071699 TGGATAGGGCAATAGAACGGC 59.928 52.381 0.00 0.00 0.00 5.68
676 701 3.485463 TTGGATAGGGCAATAGAACGG 57.515 47.619 0.00 0.00 0.00 4.44
677 702 4.196193 TGTTTGGATAGGGCAATAGAACG 58.804 43.478 0.00 0.00 0.00 3.95
678 703 6.524101 TTTGTTTGGATAGGGCAATAGAAC 57.476 37.500 0.00 0.00 0.00 3.01
679 704 6.495181 TGTTTTGTTTGGATAGGGCAATAGAA 59.505 34.615 0.00 0.00 0.00 2.10
680 705 6.013379 TGTTTTGTTTGGATAGGGCAATAGA 58.987 36.000 0.00 0.00 0.00 1.98
681 706 6.279513 TGTTTTGTTTGGATAGGGCAATAG 57.720 37.500 0.00 0.00 0.00 1.73
682 707 6.672266 TTGTTTTGTTTGGATAGGGCAATA 57.328 33.333 0.00 0.00 0.00 1.90
683 708 5.559148 TTGTTTTGTTTGGATAGGGCAAT 57.441 34.783 0.00 0.00 0.00 3.56
684 709 5.359194 TTTGTTTTGTTTGGATAGGGCAA 57.641 34.783 0.00 0.00 0.00 4.52
685 710 5.359194 TTTTGTTTTGTTTGGATAGGGCA 57.641 34.783 0.00 0.00 0.00 5.36
686 711 6.875948 ATTTTTGTTTTGTTTGGATAGGGC 57.124 33.333 0.00 0.00 0.00 5.19
687 712 8.443953 TGAATTTTTGTTTTGTTTGGATAGGG 57.556 30.769 0.00 0.00 0.00 3.53
688 713 9.323985 TCTGAATTTTTGTTTTGTTTGGATAGG 57.676 29.630 0.00 0.00 0.00 2.57
690 715 9.103861 GGTCTGAATTTTTGTTTTGTTTGGATA 57.896 29.630 0.00 0.00 0.00 2.59
691 716 7.609532 TGGTCTGAATTTTTGTTTTGTTTGGAT 59.390 29.630 0.00 0.00 0.00 3.41
692 717 6.936900 TGGTCTGAATTTTTGTTTTGTTTGGA 59.063 30.769 0.00 0.00 0.00 3.53
693 718 7.138692 TGGTCTGAATTTTTGTTTTGTTTGG 57.861 32.000 0.00 0.00 0.00 3.28
694 719 8.900762 GTTTGGTCTGAATTTTTGTTTTGTTTG 58.099 29.630 0.00 0.00 0.00 2.93
695 720 8.845227 AGTTTGGTCTGAATTTTTGTTTTGTTT 58.155 25.926 0.00 0.00 0.00 2.83
696 721 8.389779 AGTTTGGTCTGAATTTTTGTTTTGTT 57.610 26.923 0.00 0.00 0.00 2.83
697 722 7.977789 AGTTTGGTCTGAATTTTTGTTTTGT 57.022 28.000 0.00 0.00 0.00 2.83
698 723 9.150348 ACTAGTTTGGTCTGAATTTTTGTTTTG 57.850 29.630 0.00 0.00 0.00 2.44
699 724 9.150348 CACTAGTTTGGTCTGAATTTTTGTTTT 57.850 29.630 0.00 0.00 0.00 2.43
700 725 8.311109 ACACTAGTTTGGTCTGAATTTTTGTTT 58.689 29.630 0.00 0.00 0.00 2.83
701 726 7.836842 ACACTAGTTTGGTCTGAATTTTTGTT 58.163 30.769 0.00 0.00 0.00 2.83
702 727 7.339466 AGACACTAGTTTGGTCTGAATTTTTGT 59.661 33.333 12.27 0.00 40.21 2.83
703 728 7.707104 AGACACTAGTTTGGTCTGAATTTTTG 58.293 34.615 12.27 0.00 40.21 2.44
704 729 7.881775 AGACACTAGTTTGGTCTGAATTTTT 57.118 32.000 12.27 0.00 40.21 1.94
717 742 3.463944 CGACCCAAACAGACACTAGTTT 58.536 45.455 0.00 0.00 38.40 2.66
718 743 2.805657 GCGACCCAAACAGACACTAGTT 60.806 50.000 0.00 0.00 0.00 2.24
719 744 1.270147 GCGACCCAAACAGACACTAGT 60.270 52.381 0.00 0.00 0.00 2.57
720 745 1.429463 GCGACCCAAACAGACACTAG 58.571 55.000 0.00 0.00 0.00 2.57
721 746 0.319211 CGCGACCCAAACAGACACTA 60.319 55.000 0.00 0.00 0.00 2.74
722 747 1.594293 CGCGACCCAAACAGACACT 60.594 57.895 0.00 0.00 0.00 3.55
723 748 1.828331 GACGCGACCCAAACAGACAC 61.828 60.000 15.93 0.00 0.00 3.67
724 749 1.593209 GACGCGACCCAAACAGACA 60.593 57.895 15.93 0.00 0.00 3.41
725 750 2.654912 CGACGCGACCCAAACAGAC 61.655 63.158 15.93 0.00 0.00 3.51
726 751 2.355363 CGACGCGACCCAAACAGA 60.355 61.111 15.93 0.00 0.00 3.41
727 752 3.411351 CCGACGCGACCCAAACAG 61.411 66.667 15.93 0.00 0.00 3.16
728 753 3.851845 CTCCGACGCGACCCAAACA 62.852 63.158 15.93 0.00 0.00 2.83
729 754 3.110178 CTCCGACGCGACCCAAAC 61.110 66.667 15.93 0.00 0.00 2.93
738 763 4.908877 GTAGCCGAGCTCCGACGC 62.909 72.222 8.47 4.89 40.44 5.19
739 764 1.434622 TTAGTAGCCGAGCTCCGACG 61.435 60.000 8.47 0.00 40.44 5.12
740 765 0.953003 ATTAGTAGCCGAGCTCCGAC 59.047 55.000 8.47 1.54 40.44 4.79
741 766 1.688772 AATTAGTAGCCGAGCTCCGA 58.311 50.000 8.47 0.00 40.44 4.55
742 767 2.510768 AAATTAGTAGCCGAGCTCCG 57.489 50.000 8.47 2.35 40.44 4.63
743 768 4.037684 TCACTAAATTAGTAGCCGAGCTCC 59.962 45.833 8.47 0.00 40.44 4.70
744 769 5.184340 TCACTAAATTAGTAGCCGAGCTC 57.816 43.478 5.23 2.73 40.44 4.09
745 770 5.533482 CATCACTAAATTAGTAGCCGAGCT 58.467 41.667 5.23 3.87 43.41 4.09
746 771 4.150804 GCATCACTAAATTAGTAGCCGAGC 59.849 45.833 5.23 1.76 37.23 5.03
747 772 4.686554 GGCATCACTAAATTAGTAGCCGAG 59.313 45.833 20.02 4.35 39.17 4.63
748 773 4.502604 GGGCATCACTAAATTAGTAGCCGA 60.503 45.833 24.16 12.63 44.53 5.54
749 774 3.746492 GGGCATCACTAAATTAGTAGCCG 59.254 47.826 24.16 8.76 44.53 5.52
750 775 4.757149 CAGGGCATCACTAAATTAGTAGCC 59.243 45.833 23.61 23.61 43.68 3.93
751 776 5.611374 TCAGGGCATCACTAAATTAGTAGC 58.389 41.667 5.23 9.93 37.23 3.58
752 777 6.201044 CGTTCAGGGCATCACTAAATTAGTAG 59.799 42.308 5.23 1.42 37.23 2.57
753 778 6.046593 CGTTCAGGGCATCACTAAATTAGTA 58.953 40.000 5.23 0.00 37.23 1.82
754 779 4.876107 CGTTCAGGGCATCACTAAATTAGT 59.124 41.667 0.00 0.00 40.28 2.24
755 780 4.260784 GCGTTCAGGGCATCACTAAATTAG 60.261 45.833 0.00 0.00 0.00 1.73
756 781 3.625764 GCGTTCAGGGCATCACTAAATTA 59.374 43.478 0.00 0.00 0.00 1.40
757 782 2.423538 GCGTTCAGGGCATCACTAAATT 59.576 45.455 0.00 0.00 0.00 1.82
758 783 2.017049 GCGTTCAGGGCATCACTAAAT 58.983 47.619 0.00 0.00 0.00 1.40
759 784 1.448985 GCGTTCAGGGCATCACTAAA 58.551 50.000 0.00 0.00 0.00 1.85
760 785 0.739462 CGCGTTCAGGGCATCACTAA 60.739 55.000 0.00 0.00 0.00 2.24
761 786 1.153647 CGCGTTCAGGGCATCACTA 60.154 57.895 0.00 0.00 0.00 2.74
762 787 2.434884 CGCGTTCAGGGCATCACT 60.435 61.111 0.00 0.00 0.00 3.41
771 796 3.664486 GTGATATGTACTAGCGCGTTCAG 59.336 47.826 8.43 5.01 0.00 3.02
773 798 3.886549 AGTGATATGTACTAGCGCGTTC 58.113 45.455 8.43 0.00 31.53 3.95
780 805 5.888901 TGGGAGGGTAGTGATATGTACTAG 58.111 45.833 0.00 0.00 31.72 2.57
795 820 3.017581 GCCATGGACTGGGAGGGT 61.018 66.667 18.40 0.00 46.06 4.34
925 950 1.680249 GCAATTTTCCTCCTCTCGCCT 60.680 52.381 0.00 0.00 0.00 5.52
981 1006 1.318158 GGGACGTGTGGGAGTATCGT 61.318 60.000 0.00 0.00 34.37 3.73
1015 1046 0.110486 GAAGCAGAGGTGGTGGGAAA 59.890 55.000 0.00 0.00 33.61 3.13
1267 1342 2.509336 CGCAGCTCCACTAACCGG 60.509 66.667 0.00 0.00 0.00 5.28
1291 1366 0.877743 GAACTGCCCAACTCTCAAGC 59.122 55.000 0.00 0.00 0.00 4.01
1338 1420 1.227734 AAACCCACTGTTCCGTCGG 60.228 57.895 4.39 4.39 35.67 4.79
1350 1432 2.203625 GCCCAAGCCTCAAACCCA 60.204 61.111 0.00 0.00 0.00 4.51
1362 1444 4.589675 GACACAACCCCGGCCCAA 62.590 66.667 0.00 0.00 0.00 4.12
1365 1447 2.203437 AAAGACACAACCCCGGCC 60.203 61.111 0.00 0.00 0.00 6.13
1368 1451 1.519408 CCTACAAAGACACAACCCCG 58.481 55.000 0.00 0.00 0.00 5.73
1381 1466 2.472695 ATCAAACAGCTCGCCTACAA 57.527 45.000 0.00 0.00 0.00 2.41
1448 1533 5.468540 TTCCAGTATACATAAGCTGCGAT 57.531 39.130 5.50 0.00 0.00 4.58
1465 1755 5.532406 TGACTCCAGTTTCTCAAAATTCCAG 59.468 40.000 0.00 0.00 0.00 3.86
1466 1756 5.445069 TGACTCCAGTTTCTCAAAATTCCA 58.555 37.500 0.00 0.00 0.00 3.53
1488 1778 6.451064 AGTTTTGAAACAAACCTAGACCTG 57.549 37.500 9.08 0.00 41.30 4.00
1506 1800 3.307762 GCCAGACCTGACTCCATAGTTTT 60.308 47.826 0.00 0.00 35.56 2.43
1532 1826 3.564225 GTCAACTACAACCAAACTCCCAG 59.436 47.826 0.00 0.00 0.00 4.45
1535 1829 5.642491 GGATAGTCAACTACAACCAAACTCC 59.358 44.000 0.00 0.00 0.00 3.85
1536 1830 6.465084 AGGATAGTCAACTACAACCAAACTC 58.535 40.000 10.40 0.00 0.00 3.01
1537 1831 6.435292 AGGATAGTCAACTACAACCAAACT 57.565 37.500 10.40 0.00 0.00 2.66
1540 1834 7.786046 TCTAAGGATAGTCAACTACAACCAA 57.214 36.000 10.40 1.77 0.00 3.67
1541 1835 7.786046 TTCTAAGGATAGTCAACTACAACCA 57.214 36.000 10.40 0.00 0.00 3.67
1542 1836 8.529476 TCTTTCTAAGGATAGTCAACTACAACC 58.471 37.037 0.00 0.00 0.00 3.77
1543 1837 9.924650 TTCTTTCTAAGGATAGTCAACTACAAC 57.075 33.333 0.00 0.00 0.00 3.32
1552 1846 9.561270 GCAACATTTTTCTTTCTAAGGATAGTC 57.439 33.333 0.00 0.00 0.00 2.59
1553 1847 8.523658 GGCAACATTTTTCTTTCTAAGGATAGT 58.476 33.333 0.00 0.00 0.00 2.12
1564 1858 6.670695 ATCCAGTAGGCAACATTTTTCTTT 57.329 33.333 0.00 0.00 41.41 2.52
1567 1861 6.454795 TCAAATCCAGTAGGCAACATTTTTC 58.545 36.000 0.00 0.00 41.41 2.29
1617 1911 4.573607 TGTGAGCTCATATTCTGATGCAAC 59.426 41.667 21.47 1.80 33.23 4.17
1620 1914 5.055144 TCTTGTGAGCTCATATTCTGATGC 58.945 41.667 21.47 3.05 32.10 3.91
1700 1996 4.858935 CTCGCAATGAGGTTCTTCAAAAA 58.141 39.130 0.00 0.00 41.29 1.94
1701 1997 4.488126 CTCGCAATGAGGTTCTTCAAAA 57.512 40.909 0.00 0.00 41.29 2.44
1715 2011 1.078143 GAACTCCTGCCCTCGCAAT 60.078 57.895 0.00 0.00 46.66 3.56
1729 2025 5.869579 TCTTCTTAATGAACTGCAGGAACT 58.130 37.500 19.93 0.00 43.88 3.01
1752 2048 8.798975 TCCTTATAAACTGGACCATCTCTATT 57.201 34.615 0.00 0.00 0.00 1.73
1787 2083 8.801882 TTAACTGGGATATGTTAGACTTTTGG 57.198 34.615 0.00 0.00 31.46 3.28
1794 2090 8.020253 TCCCCTAATTAACTGGGATATGTTAGA 58.980 37.037 9.38 0.00 42.14 2.10
1809 2105 7.056006 GGTTTTATCTCGGTTCCCCTAATTAA 58.944 38.462 0.00 0.00 0.00 1.40
1948 2247 5.489792 TCCTATGATCCTAAGCCATGAAC 57.510 43.478 0.00 0.00 0.00 3.18
1996 2469 9.100197 ACAACAATATTACAAGAAAAATCCCCT 57.900 29.630 0.00 0.00 0.00 4.79
2311 2789 4.440802 GGTTTGTCACCAAATTGCAGTACA 60.441 41.667 0.00 0.00 46.42 2.90
2568 3047 4.939052 TTTTCCATTCACCGGCTTAAAA 57.061 36.364 0.00 0.00 0.00 1.52
2755 3235 8.737168 TTCAGAAGTTATCCTACAATTGATGG 57.263 34.615 13.59 13.15 0.00 3.51
2845 3327 3.674997 TGCAGCTTCAACCTTACCTTAG 58.325 45.455 0.00 0.00 0.00 2.18
2901 3383 6.883756 TGATGTTGTATGATGGCTTCAACTTA 59.116 34.615 7.20 0.00 38.03 2.24
2941 3423 6.350194 CCTTGCAGTTAGTACAGAGTGATGTA 60.350 42.308 0.00 0.00 34.56 2.29
3024 3508 8.743085 ATCAAAATAGCTGACAGATTATGTGT 57.257 30.769 6.65 0.00 44.17 3.72
3106 3593 6.500684 ACAGCGTGAAGACATAAAATTGAT 57.499 33.333 0.00 0.00 0.00 2.57
3146 3633 6.413269 GTTTGCTTCAACTGCTTTATTTGTG 58.587 36.000 0.00 0.00 0.00 3.33
3341 3828 5.670485 ACACCTTCATCAGCAATAATACGA 58.330 37.500 0.00 0.00 0.00 3.43
3570 4057 1.265095 CACGTCTCAAAATGCACAGCT 59.735 47.619 0.00 0.00 0.00 4.24
3602 4089 5.069648 GCCTATAGATAGCATGACCAGCATA 59.930 44.000 0.00 0.00 34.82 3.14
3689 4179 8.035394 TGGTACTTCTACACTGAATCATTTCTC 58.965 37.037 0.00 0.00 32.78 2.87
3710 4200 4.161565 TGATAGTTGAGGTGTCCATGGTAC 59.838 45.833 12.58 12.11 0.00 3.34
3715 4205 2.418746 GCGTGATAGTTGAGGTGTCCAT 60.419 50.000 0.00 0.00 0.00 3.41
3719 4209 0.973632 TGGCGTGATAGTTGAGGTGT 59.026 50.000 0.00 0.00 0.00 4.16
3751 4241 5.925969 GCTAGCAATCCAGAGATCTTAACTC 59.074 44.000 10.63 0.00 34.95 3.01
3770 4260 3.256281 AGCAAAGAACCCTGCTAGC 57.744 52.632 8.10 8.10 46.92 3.42
3920 4410 1.354040 CTAGCTTCAACAGGTCAGCG 58.646 55.000 0.00 0.00 37.35 5.18
4099 4589 6.308766 GTGTAATGAAAGGCATGTGAATGAAC 59.691 38.462 0.00 0.00 37.28 3.18
4189 4679 8.211629 GGAGTATCAGGACCATGTAGTTTTAAT 58.788 37.037 0.00 0.00 36.25 1.40
4200 4690 4.785376 GGATAATGGGAGTATCAGGACCAT 59.215 45.833 0.00 0.00 43.39 3.55
4561 5051 7.989170 AGTCATCTGCATACAAGATGTCATTAA 59.011 33.333 11.38 0.00 40.04 1.40
4698 5188 6.595326 TCAGAACCAACTGCTGATTTATACTG 59.405 38.462 0.00 0.00 37.75 2.74
4699 5189 6.711277 TCAGAACCAACTGCTGATTTATACT 58.289 36.000 0.00 0.00 37.75 2.12
4700 5190 6.985188 TCAGAACCAACTGCTGATTTATAC 57.015 37.500 0.00 0.00 37.75 1.47
4701 5191 8.704668 TCTATCAGAACCAACTGCTGATTTATA 58.295 33.333 9.51 0.00 44.55 0.98
4702 5192 7.497249 GTCTATCAGAACCAACTGCTGATTTAT 59.503 37.037 9.51 0.00 44.55 1.40
4707 5197 3.578282 TGTCTATCAGAACCAACTGCTGA 59.422 43.478 0.00 0.00 42.25 4.26
4726 5216 7.201652 GCCAAGGAGATAAGTACAGATTTTGTC 60.202 40.741 0.00 0.00 41.29 3.18
4858 5351 3.012518 CCACTGATGAGATGGGTTCAAC 58.987 50.000 0.00 0.00 0.00 3.18
4876 5369 1.896220 TGTTTGATGTCTGGCTCCAC 58.104 50.000 0.00 0.00 0.00 4.02
4884 5377 8.739972 AGTACTGAAAAAGTTTGTTTGATGTCT 58.260 29.630 0.00 0.00 40.56 3.41
4909 5402 0.108756 GTTTCTTCGGACGGAGGGAG 60.109 60.000 0.00 0.00 0.00 4.30
4910 5403 0.541296 AGTTTCTTCGGACGGAGGGA 60.541 55.000 0.00 0.00 0.00 4.20
4911 5404 0.320697 AAGTTTCTTCGGACGGAGGG 59.679 55.000 0.00 0.00 0.00 4.30
4912 5405 1.429463 CAAGTTTCTTCGGACGGAGG 58.571 55.000 0.00 0.00 0.00 4.30
4913 5406 0.790814 GCAAGTTTCTTCGGACGGAG 59.209 55.000 0.00 0.00 0.00 4.63
4914 5407 0.601841 GGCAAGTTTCTTCGGACGGA 60.602 55.000 0.00 0.00 0.00 4.69
4915 5408 1.574702 GGGCAAGTTTCTTCGGACGG 61.575 60.000 0.00 0.00 0.00 4.79
4916 5409 1.574702 GGGGCAAGTTTCTTCGGACG 61.575 60.000 0.00 0.00 0.00 4.79
4917 5410 0.536460 TGGGGCAAGTTTCTTCGGAC 60.536 55.000 0.00 0.00 0.00 4.79
4918 5411 0.183971 TTGGGGCAAGTTTCTTCGGA 59.816 50.000 0.00 0.00 0.00 4.55
4919 5412 0.598065 CTTGGGGCAAGTTTCTTCGG 59.402 55.000 0.00 0.00 36.79 4.30
4920 5413 0.039165 GCTTGGGGCAAGTTTCTTCG 60.039 55.000 0.00 0.00 42.77 3.79
4921 5414 1.332195 AGCTTGGGGCAAGTTTCTTC 58.668 50.000 0.00 0.00 42.77 2.87
4922 5415 1.413812 CAAGCTTGGGGCAAGTTTCTT 59.586 47.619 19.14 0.00 41.55 2.52
4923 5416 1.043022 CAAGCTTGGGGCAAGTTTCT 58.957 50.000 19.14 0.00 41.55 2.52
4924 5417 0.752658 ACAAGCTTGGGGCAAGTTTC 59.247 50.000 29.18 0.00 41.55 2.78
4925 5418 1.138859 GAACAAGCTTGGGGCAAGTTT 59.861 47.619 29.18 12.43 43.58 2.66
4926 5419 0.752658 GAACAAGCTTGGGGCAAGTT 59.247 50.000 29.18 13.16 42.77 2.66
4927 5420 1.115326 GGAACAAGCTTGGGGCAAGT 61.115 55.000 29.18 4.47 42.77 3.16
4928 5421 0.829182 AGGAACAAGCTTGGGGCAAG 60.829 55.000 29.18 3.71 43.57 4.01
4929 5422 0.827507 GAGGAACAAGCTTGGGGCAA 60.828 55.000 29.18 0.00 44.79 4.52
4930 5423 1.228552 GAGGAACAAGCTTGGGGCA 60.229 57.895 29.18 0.00 44.79 5.36
4931 5424 0.827507 TTGAGGAACAAGCTTGGGGC 60.828 55.000 29.18 17.23 42.19 5.80
4932 5425 1.703411 TTTGAGGAACAAGCTTGGGG 58.297 50.000 29.18 6.05 39.77 4.96
4933 5426 4.335416 TCTATTTGAGGAACAAGCTTGGG 58.665 43.478 29.18 6.83 39.77 4.12
4934 5427 5.416952 ACATCTATTTGAGGAACAAGCTTGG 59.583 40.000 29.18 12.28 39.77 3.61
4935 5428 6.506500 ACATCTATTTGAGGAACAAGCTTG 57.493 37.500 24.84 24.84 39.77 4.01
4936 5429 8.270744 AGATACATCTATTTGAGGAACAAGCTT 58.729 33.333 0.00 0.00 36.19 3.74
4937 5430 7.800092 AGATACATCTATTTGAGGAACAAGCT 58.200 34.615 0.00 0.00 36.19 3.74
4938 5431 9.547753 TTAGATACATCTATTTGAGGAACAAGC 57.452 33.333 0.00 0.00 39.02 4.01
4941 5434 9.817809 GTGTTAGATACATCTATTTGAGGAACA 57.182 33.333 0.00 0.00 39.02 3.18
4952 5445 8.195436 GCACCAAGTTAGTGTTAGATACATCTA 58.805 37.037 3.37 0.00 39.39 1.98
4953 5446 7.042335 GCACCAAGTTAGTGTTAGATACATCT 58.958 38.462 3.37 0.00 39.39 2.90
4954 5447 7.042335 AGCACCAAGTTAGTGTTAGATACATC 58.958 38.462 3.37 0.00 39.39 3.06
4955 5448 6.947464 AGCACCAAGTTAGTGTTAGATACAT 58.053 36.000 3.37 0.00 39.39 2.29
4956 5449 6.354794 AGCACCAAGTTAGTGTTAGATACA 57.645 37.500 3.37 0.00 37.56 2.29
4957 5450 7.769220 TCTAGCACCAAGTTAGTGTTAGATAC 58.231 38.462 18.99 0.00 46.54 2.24
4958 5451 7.949690 TCTAGCACCAAGTTAGTGTTAGATA 57.050 36.000 18.99 4.07 46.54 1.98
4959 5452 6.852420 TCTAGCACCAAGTTAGTGTTAGAT 57.148 37.500 18.99 0.00 46.54 1.98
4961 5454 7.544622 TGTATCTAGCACCAAGTTAGTGTTAG 58.455 38.462 15.74 15.74 45.27 2.34
4962 5455 7.470935 TGTATCTAGCACCAAGTTAGTGTTA 57.529 36.000 3.37 0.99 37.56 2.41
4963 5456 6.354794 TGTATCTAGCACCAAGTTAGTGTT 57.645 37.500 3.37 0.00 37.56 3.32
4964 5457 5.995565 TGTATCTAGCACCAAGTTAGTGT 57.004 39.130 3.37 0.00 37.56 3.55
4965 5458 5.986135 GGATGTATCTAGCACCAAGTTAGTG 59.014 44.000 0.00 0.00 38.30 2.74
4966 5459 5.661312 TGGATGTATCTAGCACCAAGTTAGT 59.339 40.000 0.00 0.00 33.25 2.24
4967 5460 6.161855 TGGATGTATCTAGCACCAAGTTAG 57.838 41.667 0.00 0.00 32.79 2.34
4968 5461 6.747414 ATGGATGTATCTAGCACCAAGTTA 57.253 37.500 0.00 0.00 0.00 2.24
4969 5462 5.636903 ATGGATGTATCTAGCACCAAGTT 57.363 39.130 0.00 0.00 0.00 2.66
4970 5463 5.636903 AATGGATGTATCTAGCACCAAGT 57.363 39.130 0.00 0.00 0.00 3.16
4971 5464 6.057533 TCAAATGGATGTATCTAGCACCAAG 58.942 40.000 0.00 0.00 0.00 3.61
4972 5465 6.000246 TCAAATGGATGTATCTAGCACCAA 58.000 37.500 0.00 0.00 0.00 3.67
4973 5466 5.628797 TCAAATGGATGTATCTAGCACCA 57.371 39.130 0.00 0.00 0.00 4.17
4974 5467 5.471456 CCTTCAAATGGATGTATCTAGCACC 59.529 44.000 0.00 0.00 0.00 5.01
4975 5468 6.203723 GTCCTTCAAATGGATGTATCTAGCAC 59.796 42.308 0.00 0.00 35.87 4.40
4976 5469 6.126796 TGTCCTTCAAATGGATGTATCTAGCA 60.127 38.462 0.00 0.00 35.87 3.49
4977 5470 6.291377 TGTCCTTCAAATGGATGTATCTAGC 58.709 40.000 0.00 0.00 35.87 3.42
4978 5471 7.989741 ACTTGTCCTTCAAATGGATGTATCTAG 59.010 37.037 0.00 0.00 35.87 2.43
4979 5472 7.861629 ACTTGTCCTTCAAATGGATGTATCTA 58.138 34.615 0.00 0.00 35.87 1.98
4980 5473 6.725364 ACTTGTCCTTCAAATGGATGTATCT 58.275 36.000 0.00 0.00 35.87 1.98
4981 5474 7.396540 AACTTGTCCTTCAAATGGATGTATC 57.603 36.000 0.00 0.00 35.87 2.24
4982 5475 7.781324 AAACTTGTCCTTCAAATGGATGTAT 57.219 32.000 0.00 0.00 35.87 2.29
4983 5476 7.595819 AAAACTTGTCCTTCAAATGGATGTA 57.404 32.000 0.00 0.00 35.87 2.29
4984 5477 6.484364 AAAACTTGTCCTTCAAATGGATGT 57.516 33.333 0.00 0.00 35.87 3.06
5005 5498 1.631405 TAGTCCCTCCGTCCGAAAAA 58.369 50.000 0.00 0.00 0.00 1.94
5006 5499 1.856629 ATAGTCCCTCCGTCCGAAAA 58.143 50.000 0.00 0.00 0.00 2.29
5007 5500 2.734755 TATAGTCCCTCCGTCCGAAA 57.265 50.000 0.00 0.00 0.00 3.46
5008 5501 2.965671 ATATAGTCCCTCCGTCCGAA 57.034 50.000 0.00 0.00 0.00 4.30
5009 5502 4.581309 AATATATAGTCCCTCCGTCCGA 57.419 45.455 0.00 0.00 0.00 4.55
5010 5503 4.461781 ACAAATATATAGTCCCTCCGTCCG 59.538 45.833 0.00 0.00 0.00 4.79
5011 5504 5.997384 ACAAATATATAGTCCCTCCGTCC 57.003 43.478 0.00 0.00 0.00 4.79
5012 5505 8.033626 CCTAAACAAATATATAGTCCCTCCGTC 58.966 40.741 0.00 0.00 0.00 4.79
5013 5506 7.526693 GCCTAAACAAATATATAGTCCCTCCGT 60.527 40.741 0.00 0.00 0.00 4.69
5014 5507 6.817140 GCCTAAACAAATATATAGTCCCTCCG 59.183 42.308 0.00 0.00 0.00 4.63
5015 5508 7.037514 AGGCCTAAACAAATATATAGTCCCTCC 60.038 40.741 1.29 0.00 0.00 4.30
5016 5509 7.919151 AGGCCTAAACAAATATATAGTCCCTC 58.081 38.462 1.29 0.00 0.00 4.30
5017 5510 7.890169 AGGCCTAAACAAATATATAGTCCCT 57.110 36.000 1.29 0.00 0.00 4.20
5079 5579 8.921205 ACGAGAATTAACTACACATATTACCCT 58.079 33.333 0.00 0.00 0.00 4.34
5170 5675 0.179156 CACATTTCACCGGATGCAGC 60.179 55.000 9.46 0.00 0.00 5.25
5177 5682 3.260475 TCCACTATCACATTTCACCGG 57.740 47.619 0.00 0.00 0.00 5.28
5191 5696 3.181455 ACAGCTGACACAAACATCCACTA 60.181 43.478 23.35 0.00 0.00 2.74
5273 5778 0.740868 AATGTGGCAGTCCGACATCG 60.741 55.000 0.40 0.00 32.69 3.84
5330 5835 7.637709 AAAGAAAATACGAGGCAATGTTTTC 57.362 32.000 0.00 8.53 36.39 2.29
5360 5865 6.698766 GCATTTTGGATTTCCATCAGTACATC 59.301 38.462 0.00 0.00 46.97 3.06
5364 5869 4.097741 CGGCATTTTGGATTTCCATCAGTA 59.902 41.667 0.00 0.00 46.97 2.74
5367 5872 2.418471 GCGGCATTTTGGATTTCCATCA 60.418 45.455 0.00 0.00 46.97 3.07
5372 5877 2.368655 ACAGCGGCATTTTGGATTTC 57.631 45.000 1.45 0.00 0.00 2.17
5376 5881 0.519519 CGTAACAGCGGCATTTTGGA 59.480 50.000 1.45 0.00 0.00 3.53
5379 5884 1.519408 AGACGTAACAGCGGCATTTT 58.481 45.000 1.45 0.00 43.41 1.82
5387 5892 5.585500 TGAACAATGTAAGACGTAACAGC 57.415 39.130 0.00 0.00 0.00 4.40
5394 5899 5.023920 GCACATGATGAACAATGTAAGACG 58.976 41.667 0.00 0.00 0.00 4.18
5429 5934 2.541907 AAGGCCAGTGGACCTGCAT 61.542 57.895 21.42 7.47 40.06 3.96
5450 5955 2.221055 GTCCTGTTGAACTGTTAGTGCG 59.779 50.000 0.00 0.00 0.00 5.34
5457 5962 4.526970 ACTGAAATGTCCTGTTGAACTGT 58.473 39.130 0.00 0.00 0.00 3.55
5488 5993 7.153315 GTCATAGTAGCATTAAGAAGGGGTAC 58.847 42.308 0.00 0.00 35.17 3.34
5489 5994 6.842280 TGTCATAGTAGCATTAAGAAGGGGTA 59.158 38.462 0.00 0.00 0.00 3.69
5490 5995 5.665812 TGTCATAGTAGCATTAAGAAGGGGT 59.334 40.000 0.00 0.00 0.00 4.95
5491 5996 6.174720 TGTCATAGTAGCATTAAGAAGGGG 57.825 41.667 0.00 0.00 0.00 4.79
5492 5997 6.226787 CCTGTCATAGTAGCATTAAGAAGGG 58.773 44.000 0.00 0.00 0.00 3.95
5518 6028 6.881065 GGATCTGAATGCTGGCAAAGTATATA 59.119 38.462 0.00 0.00 29.98 0.86
5519 6029 5.709164 GGATCTGAATGCTGGCAAAGTATAT 59.291 40.000 0.00 0.00 29.98 0.86
5528 6039 1.760192 ACTTGGATCTGAATGCTGGC 58.240 50.000 0.00 0.00 0.00 4.85
5529 6040 4.125703 GAGTACTTGGATCTGAATGCTGG 58.874 47.826 0.00 0.00 0.00 4.85
5539 6050 5.407407 TGGAAGTTGAGAGTACTTGGATC 57.593 43.478 0.00 0.00 36.04 3.36
5573 6084 2.423947 GCTGGGCACTACTACCTACCTA 60.424 54.545 0.00 0.00 0.00 3.08
5585 6096 1.384191 CCCTTTTAGGCTGGGCACT 59.616 57.895 0.00 0.00 32.73 4.40
5586 6097 4.018409 CCCTTTTAGGCTGGGCAC 57.982 61.111 0.00 0.00 32.73 5.01
5594 6105 4.799564 TTTTGTGCATAGCCCTTTTAGG 57.200 40.909 0.00 0.00 34.30 2.69
5595 6106 7.100458 ACTATTTTGTGCATAGCCCTTTTAG 57.900 36.000 0.00 0.00 0.00 1.85
5596 6107 8.582657 TTACTATTTTGTGCATAGCCCTTTTA 57.417 30.769 0.00 0.00 0.00 1.52
5597 6108 7.475137 TTACTATTTTGTGCATAGCCCTTTT 57.525 32.000 0.00 0.00 0.00 2.27
5598 6109 7.660030 ATTACTATTTTGTGCATAGCCCTTT 57.340 32.000 0.00 0.00 0.00 3.11
5599 6110 7.998964 ACTATTACTATTTTGTGCATAGCCCTT 59.001 33.333 0.00 0.00 0.00 3.95
5600 6111 7.518188 ACTATTACTATTTTGTGCATAGCCCT 58.482 34.615 0.00 0.00 0.00 5.19
5601 6112 7.745620 ACTATTACTATTTTGTGCATAGCCC 57.254 36.000 0.00 0.00 0.00 5.19
5602 6113 9.490379 AGTACTATTACTATTTTGTGCATAGCC 57.510 33.333 0.00 0.00 36.73 3.93
5618 6129 6.939163 TGCTAGTGCCCTAGTAGTACTATTAC 59.061 42.308 10.46 7.60 42.35 1.89
5631 6142 2.477245 TCTCCAAATGCTAGTGCCCTA 58.523 47.619 0.00 0.00 38.71 3.53
5635 6146 5.376854 TTCTTTTCTCCAAATGCTAGTGC 57.623 39.130 0.00 0.00 40.20 4.40
5644 6155 7.392113 TGTTATCCGCTTATTCTTTTCTCCAAA 59.608 33.333 0.00 0.00 0.00 3.28
5659 6171 2.789409 AGCCTTTCTGTTATCCGCTT 57.211 45.000 0.00 0.00 0.00 4.68
5668 6180 1.562672 ATGCCCCGTAGCCTTTCTGT 61.563 55.000 0.00 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.