Multiple sequence alignment - TraesCS3B01G152000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G152000 chr3B 100.000 3278 0 0 1 3278 143602861 143606138 0.000000e+00 6054.0
1 TraesCS3B01G152000 chr3B 89.621 2110 172 24 774 2840 143952768 143954873 0.000000e+00 2639.0
2 TraesCS3B01G152000 chr3B 86.851 905 90 18 1398 2280 143509950 143510847 0.000000e+00 985.0
3 TraesCS3B01G152000 chr3B 87.850 749 76 8 1625 2362 143568175 143568919 0.000000e+00 865.0
4 TraesCS3B01G152000 chr3B 82.701 896 123 17 323 1212 143509034 143509903 0.000000e+00 767.0
5 TraesCS3B01G152000 chr3B 77.047 928 155 32 1381 2278 66470778 66469879 6.360000e-132 481.0
6 TraesCS3B01G152000 chr3B 93.750 48 3 0 2487 2534 143569123 143569170 4.540000e-09 73.1
7 TraesCS3B01G152000 chr3D 91.146 1570 127 9 3 1568 92815246 92813685 0.000000e+00 2119.0
8 TraesCS3B01G152000 chr3D 88.000 1275 109 23 1608 2844 92813687 92812419 0.000000e+00 1467.0
9 TraesCS3B01G152000 chr3D 86.848 920 94 20 1374 2280 92896093 92895188 0.000000e+00 1003.0
10 TraesCS3B01G152000 chr3D 84.744 780 104 12 420 1193 92896907 92896137 0.000000e+00 767.0
11 TraesCS3B01G152000 chr3D 82.848 309 37 15 2105 2399 92872473 92872167 2.510000e-66 263.0
12 TraesCS3B01G152000 chr3D 81.982 111 18 2 2746 2855 319866622 319866731 3.480000e-15 93.5
13 TraesCS3B01G152000 chr3D 93.750 48 3 0 1320 1367 42679981 42679934 4.540000e-09 73.1
14 TraesCS3B01G152000 chr3A 86.496 896 97 17 1406 2280 547182338 547183230 0.000000e+00 963.0
15 TraesCS3B01G152000 chr3A 83.127 806 109 20 414 1212 547181499 547182284 0.000000e+00 710.0
16 TraesCS3B01G152000 chr3A 77.322 926 151 28 1381 2278 54232907 54232013 2.940000e-135 492.0
17 TraesCS3B01G152000 chr3A 87.879 66 6 2 5 69 648814605 648814669 3.510000e-10 76.8
18 TraesCS3B01G152000 chr3A 77.778 99 21 1 2712 2810 738077882 738077785 3.530000e-05 60.2
19 TraesCS3B01G152000 chr5B 97.917 432 9 0 2847 3278 705551380 705551811 0.000000e+00 749.0
20 TraesCS3B01G152000 chr5B 98.349 424 7 0 2855 3278 339034938 339035361 0.000000e+00 745.0
21 TraesCS3B01G152000 chr5B 97.669 429 10 0 2850 3278 677937147 677937575 0.000000e+00 737.0
22 TraesCS3B01G152000 chr4B 97.902 429 9 0 2850 3278 466958005 466957577 0.000000e+00 743.0
23 TraesCS3B01G152000 chr4B 98.113 424 8 0 2855 3278 51137332 51136909 0.000000e+00 739.0
24 TraesCS3B01G152000 chr4B 98.113 424 8 0 2855 3278 391709587 391710010 0.000000e+00 739.0
25 TraesCS3B01G152000 chr4B 97.448 431 11 0 2848 3278 141795575 141796005 0.000000e+00 736.0
26 TraesCS3B01G152000 chr7B 98.113 424 8 0 2855 3278 673903398 673902975 0.000000e+00 739.0
27 TraesCS3B01G152000 chr6B 97.032 438 11 2 2842 3278 428920812 428921248 0.000000e+00 736.0
28 TraesCS3B01G152000 chr6B 88.060 67 5 1 3 69 202198969 202198906 3.510000e-10 76.8
29 TraesCS3B01G152000 chr7D 75.980 204 39 4 2652 2855 62159260 62159453 2.690000e-16 97.1
30 TraesCS3B01G152000 chr4A 80.153 131 24 2 2711 2840 740181616 740181745 2.690000e-16 97.1
31 TraesCS3B01G152000 chr4A 81.633 98 15 2 2693 2789 615210062 615210157 9.750000e-11 78.7
32 TraesCS3B01G152000 chrUn 91.429 70 4 2 2694 2762 80812024 80812092 9.680000e-16 95.3
33 TraesCS3B01G152000 chr5D 91.045 67 6 0 3 69 184850953 184850887 1.250000e-14 91.6
34 TraesCS3B01G152000 chr5D 94.231 52 3 0 3 54 218719221 218719272 2.710000e-11 80.5
35 TraesCS3B01G152000 chr2B 91.045 67 6 0 3 69 529249330 529249264 1.250000e-14 91.6
36 TraesCS3B01G152000 chr1A 89.706 68 5 2 3 69 331726086 331726020 5.830000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G152000 chr3B 143602861 143606138 3277 False 6054.00 6054 100.0000 1 3278 1 chr3B.!!$F1 3277
1 TraesCS3B01G152000 chr3B 143952768 143954873 2105 False 2639.00 2639 89.6210 774 2840 1 chr3B.!!$F2 2066
2 TraesCS3B01G152000 chr3B 143509034 143510847 1813 False 876.00 985 84.7760 323 2280 2 chr3B.!!$F3 1957
3 TraesCS3B01G152000 chr3B 66469879 66470778 899 True 481.00 481 77.0470 1381 2278 1 chr3B.!!$R1 897
4 TraesCS3B01G152000 chr3B 143568175 143569170 995 False 469.05 865 90.8000 1625 2534 2 chr3B.!!$F4 909
5 TraesCS3B01G152000 chr3D 92812419 92815246 2827 True 1793.00 2119 89.5730 3 2844 2 chr3D.!!$R3 2841
6 TraesCS3B01G152000 chr3D 92895188 92896907 1719 True 885.00 1003 85.7960 420 2280 2 chr3D.!!$R4 1860
7 TraesCS3B01G152000 chr3A 547181499 547183230 1731 False 836.50 963 84.8115 414 2280 2 chr3A.!!$F2 1866
8 TraesCS3B01G152000 chr3A 54232013 54232907 894 True 492.00 492 77.3220 1381 2278 1 chr3A.!!$R1 897

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
630 634 0.186873 GCAATGGGGAGGGATGTGAT 59.813 55.0 0.0 0.0 0.0 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2551 2700 0.038159 CCACCTGAAGTCCAGTCGTC 60.038 60.0 0.0 0.0 41.33 4.2 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
122 123 2.243810 TGAGTTTATTGGGTTGGTGGC 58.756 47.619 0.00 0.00 0.00 5.01
140 141 1.134401 GGCAGCCTAGATTGTGTGCTA 60.134 52.381 3.29 0.00 0.00 3.49
152 153 7.411486 AGATTGTGTGCTAGTACTTATCTGT 57.589 36.000 12.42 0.00 0.00 3.41
164 165 2.770232 ACTTATCTGTTTACCCTCCCCG 59.230 50.000 0.00 0.00 0.00 5.73
165 166 2.852714 TATCTGTTTACCCTCCCCGA 57.147 50.000 0.00 0.00 0.00 5.14
166 167 1.201424 ATCTGTTTACCCTCCCCGAC 58.799 55.000 0.00 0.00 0.00 4.79
188 189 8.280497 CCGACGTAATTAATTTGGGAGATAAAG 58.720 37.037 5.91 0.00 0.00 1.85
197 198 5.643379 TTTGGGAGATAAAGTCAACATGC 57.357 39.130 0.00 0.00 0.00 4.06
224 225 1.673168 GCTGGAGATGGGATCAACAC 58.327 55.000 0.00 0.00 0.00 3.32
231 232 4.640647 GGAGATGGGATCAACACTTAAACC 59.359 45.833 0.00 0.00 0.00 3.27
242 243 5.997746 TCAACACTTAAACCAGGAGATGAAG 59.002 40.000 0.00 0.00 0.00 3.02
251 252 5.346181 ACCAGGAGATGAAGCTAAGTTAC 57.654 43.478 0.00 0.00 0.00 2.50
252 253 4.142138 ACCAGGAGATGAAGCTAAGTTACG 60.142 45.833 0.00 0.00 0.00 3.18
257 258 2.754946 TGAAGCTAAGTTACGTGGGG 57.245 50.000 0.00 0.00 0.00 4.96
266 267 5.050567 GCTAAGTTACGTGGGGATAAAATCG 60.051 44.000 0.00 0.00 0.00 3.34
273 274 3.735591 GTGGGGATAAAATCGAATCGGA 58.264 45.455 1.76 0.00 0.00 4.55
281 282 9.908152 GGGATAAAATCGAATCGGAATTTAAAT 57.092 29.630 1.76 0.00 0.00 1.40
306 307 5.282055 AGAGATCTGGTGAAATATTGCGA 57.718 39.130 0.00 0.00 0.00 5.10
338 339 2.499896 GAGCGCGCTTATTAATCATGC 58.500 47.619 36.87 13.94 0.00 4.06
363 364 1.596934 GGTCTCGCTGGAATGACCA 59.403 57.895 6.18 0.00 45.87 4.02
428 429 8.366401 ACTACCAGAGTTTTCCTACTACTTTTC 58.634 37.037 0.00 0.00 33.13 2.29
467 469 5.070685 AGGTGTTATCACAAAAGGGAAGAC 58.929 41.667 6.28 0.00 45.45 3.01
535 537 7.016072 TGGTAATTTCCATTGAAAGACACCATT 59.984 33.333 13.84 0.30 43.39 3.16
537 539 9.353999 GTAATTTCCATTGAAAGACACCATTAC 57.646 33.333 0.00 0.00 43.39 1.89
630 634 0.186873 GCAATGGGGAGGGATGTGAT 59.813 55.000 0.00 0.00 0.00 3.06
631 635 1.991121 CAATGGGGAGGGATGTGATG 58.009 55.000 0.00 0.00 0.00 3.07
667 671 7.764695 AATAGGCGGCAAAACAATAAATAAC 57.235 32.000 13.08 0.00 0.00 1.89
669 673 5.729510 AGGCGGCAAAACAATAAATAACAT 58.270 33.333 13.08 0.00 0.00 2.71
762 766 7.599245 AGACTTCTAAAGATTTGTACAAGACCG 59.401 37.037 8.56 0.00 0.00 4.79
937 942 6.371548 GGTCTAATATGTTGAAGCAGTGTCAA 59.628 38.462 0.00 0.00 32.62 3.18
1042 1049 1.226262 GCTCTCCTCCTCGTCCTCT 59.774 63.158 0.00 0.00 0.00 3.69
1052 1059 1.617263 CCTCGTCCTCTTCCTCTCCAA 60.617 57.143 0.00 0.00 0.00 3.53
1065 1072 3.054139 TCCTCTCCAACGTACTTAGCCTA 60.054 47.826 0.00 0.00 0.00 3.93
1155 1162 2.185004 ATCAGGGGACACAAGTTTCG 57.815 50.000 0.00 0.00 0.00 3.46
1232 1239 5.723672 TGATACTTCCTCCGATCCATAAC 57.276 43.478 0.00 0.00 0.00 1.89
1239 1246 4.703897 TCCTCCGATCCATAACAAATGTC 58.296 43.478 0.00 0.00 0.00 3.06
1419 1427 4.590850 ATGTTTGTTTCTTTGCCTCTCC 57.409 40.909 0.00 0.00 0.00 3.71
1428 1436 4.988716 TGCCTCTCCGTCGGGTGT 62.989 66.667 12.29 0.00 33.83 4.16
1543 1551 4.141711 ACGGCCTTCTATGTATGTGTTGAT 60.142 41.667 0.00 0.00 0.00 2.57
1593 1602 7.361201 CCTTCGATTTGATGAAAAGCAGAAGTA 60.361 37.037 13.80 0.00 39.88 2.24
1638 1650 1.215647 GCTCACGACAGAACCCGAT 59.784 57.895 0.00 0.00 0.00 4.18
1680 1692 2.755103 GGATTTCGAGTTCTTGGGCAAT 59.245 45.455 0.00 0.00 0.00 3.56
1835 1847 4.036852 CCAGCTAGTGTAAGTCATCGATCA 59.963 45.833 0.00 0.00 0.00 2.92
1846 1859 4.999310 AGTCATCGATCAGGTCCCTATTA 58.001 43.478 0.00 0.00 0.00 0.98
1892 1936 1.132199 CACGTGCACCTCGATCGTAC 61.132 60.000 15.94 5.37 33.49 3.67
2100 2144 3.706373 AATGTCGACGCCTGCCCT 61.706 61.111 11.62 0.00 0.00 5.19
2280 2324 4.608948 AGAGTGCAGCTACAACTAACTT 57.391 40.909 0.00 0.00 0.00 2.66
2297 2341 5.650703 ACTAACTTGTAGCTTTTTGTGTGGT 59.349 36.000 0.00 0.00 0.00 4.16
2529 2678 3.990092 TGAGCGAAATGTGTCACTAGTT 58.010 40.909 4.27 0.00 0.00 2.24
2543 2692 5.473162 TGTCACTAGTTCATTGACAATTGGG 59.527 40.000 10.83 0.00 45.10 4.12
2544 2693 5.009631 TCACTAGTTCATTGACAATTGGGG 58.990 41.667 10.83 0.00 0.00 4.96
2545 2694 3.763897 ACTAGTTCATTGACAATTGGGGC 59.236 43.478 10.83 0.00 0.00 5.80
2546 2695 2.893424 AGTTCATTGACAATTGGGGCT 58.107 42.857 10.83 0.00 0.00 5.19
2547 2696 3.242011 AGTTCATTGACAATTGGGGCTT 58.758 40.909 10.83 0.00 0.00 4.35
2548 2697 3.007182 AGTTCATTGACAATTGGGGCTTG 59.993 43.478 10.83 1.25 0.00 4.01
2549 2698 1.275856 TCATTGACAATTGGGGCTTGC 59.724 47.619 10.83 0.00 0.00 4.01
2550 2699 1.276989 CATTGACAATTGGGGCTTGCT 59.723 47.619 10.83 0.00 0.00 3.91
2551 2700 0.680618 TTGACAATTGGGGCTTGCTG 59.319 50.000 10.83 0.00 0.00 4.41
2553 2702 0.244721 GACAATTGGGGCTTGCTGAC 59.755 55.000 10.83 0.00 0.00 3.51
2554 2703 1.213537 CAATTGGGGCTTGCTGACG 59.786 57.895 0.00 0.00 0.00 4.35
2555 2704 1.074775 AATTGGGGCTTGCTGACGA 59.925 52.632 0.00 0.00 0.00 4.20
2556 2705 1.244019 AATTGGGGCTTGCTGACGAC 61.244 55.000 0.00 0.00 0.00 4.34
2557 2706 2.129555 ATTGGGGCTTGCTGACGACT 62.130 55.000 0.00 0.00 0.00 4.18
2558 2707 2.743928 GGGGCTTGCTGACGACTG 60.744 66.667 0.00 0.00 0.00 3.51
2559 2708 2.743928 GGGCTTGCTGACGACTGG 60.744 66.667 0.00 0.00 0.00 4.00
2585 2734 7.177878 ACTTCAGGTGGTTTATGATGAAGATT 58.822 34.615 17.02 0.00 43.95 2.40
2630 2779 1.133513 ACACAACCCCTTGATTCTGCA 60.134 47.619 0.00 0.00 0.00 4.41
2631 2780 1.270550 CACAACCCCTTGATTCTGCAC 59.729 52.381 0.00 0.00 0.00 4.57
2632 2781 1.145738 ACAACCCCTTGATTCTGCACT 59.854 47.619 0.00 0.00 0.00 4.40
2653 2811 9.019656 TGCACTGTATTTACCATATTTGAAGTT 57.980 29.630 0.00 0.00 0.00 2.66
2659 2817 9.783256 GTATTTACCATATTTGAAGTTGGTGTC 57.217 33.333 3.78 0.00 42.32 3.67
2666 2824 0.813610 TGAAGTTGGTGTCGCACTGG 60.814 55.000 9.31 0.00 34.40 4.00
2724 2882 6.072175 ACCGATTTTAGCTAATCTTGTTGCAA 60.072 34.615 7.08 0.00 33.34 4.08
2777 2935 9.796062 GTTTTAGACGATTTAAACACGTTCATA 57.204 29.630 18.51 11.77 40.29 2.15
2779 2937 9.796062 TTTAGACGATTTAAACACGTTCATAAC 57.204 29.630 18.51 8.72 40.29 1.89
2784 2942 6.575572 CGATTTAAACACGTTCATAACAAGCA 59.424 34.615 8.00 0.00 0.00 3.91
2787 2945 4.468095 AACACGTTCATAACAAGCAGAC 57.532 40.909 0.00 0.00 0.00 3.51
2794 2952 1.004745 CATAACAAGCAGACCCCACCT 59.995 52.381 0.00 0.00 0.00 4.00
2797 2955 0.766674 ACAAGCAGACCCCACCTGTA 60.767 55.000 0.00 0.00 34.29 2.74
2800 2958 0.693049 AGCAGACCCCACCTGTAAAG 59.307 55.000 0.00 0.00 34.29 1.85
2802 2960 0.322546 CAGACCCCACCTGTAAAGGC 60.323 60.000 0.00 0.00 0.00 4.35
2807 2965 0.673644 CCCACCTGTAAAGGCTGACG 60.674 60.000 0.00 0.00 0.00 4.35
2821 2979 1.190323 GCTGACGTGACAGAAAAGTCG 59.810 52.381 8.35 0.00 41.41 4.18
2827 2985 1.192534 GTGACAGAAAAGTCGAAGCCG 59.807 52.381 0.00 0.00 41.41 5.52
2840 2998 2.158058 TCGAAGCCGTTTATTTTGACCG 59.842 45.455 0.00 0.00 37.05 4.79
2844 3002 3.075884 AGCCGTTTATTTTGACCGCTAA 58.924 40.909 0.00 0.00 30.49 3.09
2845 3003 3.126343 AGCCGTTTATTTTGACCGCTAAG 59.874 43.478 0.00 0.00 30.49 2.18
2846 3004 3.120095 GCCGTTTATTTTGACCGCTAAGT 60.120 43.478 0.00 0.00 0.00 2.24
2847 3005 4.614306 GCCGTTTATTTTGACCGCTAAGTT 60.614 41.667 0.00 0.00 0.00 2.66
2848 3006 4.849383 CCGTTTATTTTGACCGCTAAGTTG 59.151 41.667 0.00 0.00 0.00 3.16
2849 3007 5.334260 CCGTTTATTTTGACCGCTAAGTTGA 60.334 40.000 0.00 0.00 0.00 3.18
2850 3008 5.562623 CGTTTATTTTGACCGCTAAGTTGAC 59.437 40.000 0.00 0.00 0.00 3.18
2851 3009 5.616488 TTATTTTGACCGCTAAGTTGACC 57.384 39.130 0.00 0.00 0.00 4.02
2852 3010 1.504359 TTTGACCGCTAAGTTGACCG 58.496 50.000 0.00 0.00 0.00 4.79
2853 3011 0.390124 TTGACCGCTAAGTTGACCGT 59.610 50.000 0.00 0.00 0.00 4.83
2854 3012 0.390124 TGACCGCTAAGTTGACCGTT 59.610 50.000 0.00 0.00 0.00 4.44
2855 3013 0.788391 GACCGCTAAGTTGACCGTTG 59.212 55.000 0.00 0.00 0.00 4.10
2856 3014 0.390124 ACCGCTAAGTTGACCGTTGA 59.610 50.000 0.00 0.00 0.00 3.18
2857 3015 1.068474 CCGCTAAGTTGACCGTTGAG 58.932 55.000 0.00 0.00 0.00 3.02
2859 3017 1.439679 GCTAAGTTGACCGTTGAGGG 58.560 55.000 0.00 0.00 46.96 4.30
2860 3018 1.001633 GCTAAGTTGACCGTTGAGGGA 59.998 52.381 0.00 0.00 46.96 4.20
2861 3019 2.931320 GCTAAGTTGACCGTTGAGGGAG 60.931 54.545 0.00 0.00 46.96 4.30
2862 3020 1.129058 AAGTTGACCGTTGAGGGAGT 58.871 50.000 0.00 0.00 46.96 3.85
2863 3021 1.129058 AGTTGACCGTTGAGGGAGTT 58.871 50.000 0.00 0.00 46.96 3.01
2864 3022 1.070289 AGTTGACCGTTGAGGGAGTTC 59.930 52.381 0.00 0.00 46.96 3.01
2865 3023 0.395312 TTGACCGTTGAGGGAGTTCC 59.605 55.000 0.00 0.00 46.96 3.62
2866 3024 1.080025 GACCGTTGAGGGAGTTCCG 60.080 63.158 0.00 0.00 46.96 4.30
2867 3025 2.264794 CCGTTGAGGGAGTTCCGG 59.735 66.667 0.00 0.00 41.52 5.14
2868 3026 2.280552 CCGTTGAGGGAGTTCCGGA 61.281 63.158 0.00 0.00 41.52 5.14
2869 3027 1.080025 CGTTGAGGGAGTTCCGGAC 60.080 63.158 1.83 0.00 41.52 4.79
2870 3028 1.533469 CGTTGAGGGAGTTCCGGACT 61.533 60.000 1.83 4.69 42.70 3.85
2871 3029 1.553706 GTTGAGGGAGTTCCGGACTA 58.446 55.000 1.83 0.00 39.19 2.59
2872 3030 1.477295 GTTGAGGGAGTTCCGGACTAG 59.523 57.143 1.83 0.00 39.19 2.57
2873 3031 0.033405 TGAGGGAGTTCCGGACTAGG 60.033 60.000 1.83 0.00 39.19 3.02
2874 3032 0.756070 GAGGGAGTTCCGGACTAGGG 60.756 65.000 1.83 0.00 39.19 3.53
2875 3033 1.761271 GGGAGTTCCGGACTAGGGG 60.761 68.421 1.83 0.00 39.19 4.79
2876 3034 1.761271 GGAGTTCCGGACTAGGGGG 60.761 68.421 1.83 0.00 39.19 5.40
2877 3035 1.001376 GAGTTCCGGACTAGGGGGT 59.999 63.158 1.83 0.00 39.19 4.95
2878 3036 1.305887 AGTTCCGGACTAGGGGGTG 60.306 63.158 1.83 0.00 36.65 4.61
2879 3037 1.611556 GTTCCGGACTAGGGGGTGT 60.612 63.158 1.83 0.00 0.00 4.16
2880 3038 1.305549 TTCCGGACTAGGGGGTGTC 60.306 63.158 1.83 0.00 0.00 3.67
2881 3039 2.762875 CCGGACTAGGGGGTGTCC 60.763 72.222 0.00 0.00 46.69 4.02
2883 3041 2.762875 GGACTAGGGGGTGTCCGG 60.763 72.222 0.00 0.00 42.51 5.14
2884 3042 2.361771 GACTAGGGGGTGTCCGGA 59.638 66.667 0.00 0.00 36.01 5.14
2885 3043 1.075450 GACTAGGGGGTGTCCGGAT 60.075 63.158 7.81 0.00 36.01 4.18
2886 3044 0.186873 GACTAGGGGGTGTCCGGATA 59.813 60.000 7.81 0.10 36.01 2.59
2887 3045 0.187851 ACTAGGGGGTGTCCGGATAG 59.812 60.000 7.81 5.89 36.01 2.08
2888 3046 1.152398 TAGGGGGTGTCCGGATAGC 60.152 63.158 20.91 20.91 36.01 2.97
2889 3047 2.668106 TAGGGGGTGTCCGGATAGCC 62.668 65.000 34.24 34.24 39.05 3.93
2890 3048 2.766651 GGGGTGTCCGGATAGCCA 60.767 66.667 39.33 18.76 41.15 4.75
2891 3049 2.372074 GGGGTGTCCGGATAGCCAA 61.372 63.158 39.33 8.52 41.15 4.52
2892 3050 1.605453 GGGTGTCCGGATAGCCAAA 59.395 57.895 36.08 0.00 39.48 3.28
2893 3051 0.746923 GGGTGTCCGGATAGCCAAAC 60.747 60.000 36.08 15.09 39.48 2.93
2894 3052 0.252197 GGTGTCCGGATAGCCAAACT 59.748 55.000 18.69 0.00 0.00 2.66
2895 3053 1.483415 GGTGTCCGGATAGCCAAACTA 59.517 52.381 18.69 0.00 34.64 2.24
2896 3054 2.104281 GGTGTCCGGATAGCCAAACTAT 59.896 50.000 18.69 0.00 44.62 2.12
2906 3064 2.498167 AGCCAAACTATCATCATCGGC 58.502 47.619 0.00 0.00 38.60 5.54
2907 3065 1.537202 GCCAAACTATCATCATCGGCC 59.463 52.381 0.00 0.00 32.01 6.13
2908 3066 1.800586 CCAAACTATCATCATCGGCCG 59.199 52.381 22.12 22.12 0.00 6.13
2909 3067 1.800586 CAAACTATCATCATCGGCCGG 59.199 52.381 27.83 10.69 0.00 6.13
2910 3068 1.338107 AACTATCATCATCGGCCGGA 58.662 50.000 27.83 16.64 0.00 5.14
2911 3069 0.603569 ACTATCATCATCGGCCGGAC 59.396 55.000 27.83 0.00 0.00 4.79
2912 3070 0.891373 CTATCATCATCGGCCGGACT 59.109 55.000 27.83 7.73 0.00 3.85
2913 3071 0.888619 TATCATCATCGGCCGGACTC 59.111 55.000 27.83 0.00 0.00 3.36
2914 3072 1.821061 ATCATCATCGGCCGGACTCC 61.821 60.000 27.83 0.00 0.00 3.85
2915 3073 2.443952 ATCATCGGCCGGACTCCA 60.444 61.111 27.83 4.46 0.00 3.86
2916 3074 2.063979 ATCATCGGCCGGACTCCAA 61.064 57.895 27.83 3.54 0.00 3.53
2917 3075 2.311688 ATCATCGGCCGGACTCCAAC 62.312 60.000 27.83 0.00 0.00 3.77
2918 3076 3.000819 ATCGGCCGGACTCCAACA 61.001 61.111 27.83 1.69 0.00 3.33
2919 3077 3.310860 ATCGGCCGGACTCCAACAC 62.311 63.158 27.83 0.00 0.00 3.32
2920 3078 4.003788 CGGCCGGACTCCAACACT 62.004 66.667 20.10 0.00 0.00 3.55
2921 3079 2.642254 CGGCCGGACTCCAACACTA 61.642 63.158 20.10 0.00 0.00 2.74
2922 3080 1.905512 GGCCGGACTCCAACACTAT 59.094 57.895 5.05 0.00 0.00 2.12
2923 3081 0.462047 GGCCGGACTCCAACACTATG 60.462 60.000 5.05 0.00 0.00 2.23
2924 3082 0.535335 GCCGGACTCCAACACTATGA 59.465 55.000 5.05 0.00 0.00 2.15
2925 3083 1.066430 GCCGGACTCCAACACTATGAA 60.066 52.381 5.05 0.00 0.00 2.57
2926 3084 2.893637 CCGGACTCCAACACTATGAAG 58.106 52.381 0.00 0.00 0.00 3.02
2927 3085 2.496070 CCGGACTCCAACACTATGAAGA 59.504 50.000 0.00 0.00 0.00 2.87
2928 3086 3.133003 CCGGACTCCAACACTATGAAGAT 59.867 47.826 0.00 0.00 0.00 2.40
2929 3087 4.341235 CCGGACTCCAACACTATGAAGATA 59.659 45.833 0.00 0.00 0.00 1.98
2930 3088 5.508153 CCGGACTCCAACACTATGAAGATAG 60.508 48.000 0.00 0.00 38.06 2.08
2931 3089 5.299531 CGGACTCCAACACTATGAAGATAGA 59.700 44.000 0.00 0.00 35.90 1.98
2932 3090 6.183360 CGGACTCCAACACTATGAAGATAGAA 60.183 42.308 0.00 0.00 35.90 2.10
2933 3091 7.206687 GGACTCCAACACTATGAAGATAGAAG 58.793 42.308 0.00 0.00 35.90 2.85
2934 3092 7.068839 GGACTCCAACACTATGAAGATAGAAGA 59.931 40.741 0.00 0.00 35.90 2.87
2935 3093 8.546083 ACTCCAACACTATGAAGATAGAAGAT 57.454 34.615 0.00 0.00 35.90 2.40
2936 3094 8.986991 ACTCCAACACTATGAAGATAGAAGATT 58.013 33.333 0.00 0.00 35.90 2.40
2937 3095 9.258826 CTCCAACACTATGAAGATAGAAGATTG 57.741 37.037 0.00 0.00 35.90 2.67
2938 3096 8.981659 TCCAACACTATGAAGATAGAAGATTGA 58.018 33.333 0.00 0.00 35.90 2.57
2939 3097 9.605275 CCAACACTATGAAGATAGAAGATTGAA 57.395 33.333 0.00 0.00 35.90 2.69
2946 3104 8.870160 ATGAAGATAGAAGATTGAAGACTTCG 57.130 34.615 10.56 0.00 44.65 3.79
2947 3105 7.831753 TGAAGATAGAAGATTGAAGACTTCGT 58.168 34.615 10.56 1.87 44.65 3.85
2948 3106 7.971168 TGAAGATAGAAGATTGAAGACTTCGTC 59.029 37.037 10.56 10.67 44.65 4.20
2949 3107 6.801575 AGATAGAAGATTGAAGACTTCGTCC 58.198 40.000 10.56 2.18 44.65 4.79
2950 3108 4.195225 AGAAGATTGAAGACTTCGTCCC 57.805 45.455 10.56 6.53 44.65 4.46
2951 3109 2.656560 AGATTGAAGACTTCGTCCCG 57.343 50.000 10.56 0.00 32.18 5.14
2952 3110 1.893801 AGATTGAAGACTTCGTCCCGT 59.106 47.619 10.56 0.00 32.18 5.28
2953 3111 1.993370 GATTGAAGACTTCGTCCCGTG 59.007 52.381 10.56 0.00 32.18 4.94
2954 3112 0.748450 TTGAAGACTTCGTCCCGTGT 59.252 50.000 10.56 0.00 32.18 4.49
2955 3113 0.313043 TGAAGACTTCGTCCCGTGTC 59.687 55.000 10.56 0.00 32.18 3.67
2956 3114 0.597072 GAAGACTTCGTCCCGTGTCT 59.403 55.000 0.00 8.38 40.63 3.41
2957 3115 0.314302 AAGACTTCGTCCCGTGTCTG 59.686 55.000 12.63 0.00 39.66 3.51
2958 3116 1.080705 GACTTCGTCCCGTGTCTGG 60.081 63.158 0.00 0.00 32.61 3.86
2959 3117 1.521450 GACTTCGTCCCGTGTCTGGA 61.521 60.000 0.00 0.00 32.61 3.86
2960 3118 0.898789 ACTTCGTCCCGTGTCTGGAT 60.899 55.000 0.00 0.00 33.65 3.41
2961 3119 0.458543 CTTCGTCCCGTGTCTGGATG 60.459 60.000 0.00 0.00 39.77 3.51
2962 3120 1.884075 TTCGTCCCGTGTCTGGATGG 61.884 60.000 0.00 0.00 39.05 3.51
2963 3121 2.584608 GTCCCGTGTCTGGATGGG 59.415 66.667 0.00 0.00 43.36 4.00
2965 3123 1.987855 TCCCGTGTCTGGATGGGAC 60.988 63.158 0.00 0.00 45.66 4.46
2966 3124 1.990060 CCCGTGTCTGGATGGGACT 60.990 63.158 0.00 0.00 44.88 3.85
2967 3125 1.553690 CCCGTGTCTGGATGGGACTT 61.554 60.000 0.00 0.00 44.88 3.01
2968 3126 0.324943 CCGTGTCTGGATGGGACTTT 59.675 55.000 0.00 0.00 35.04 2.66
2969 3127 1.676014 CCGTGTCTGGATGGGACTTTC 60.676 57.143 0.00 0.00 35.04 2.62
2970 3128 1.676014 CGTGTCTGGATGGGACTTTCC 60.676 57.143 0.00 0.00 35.04 3.13
2971 3129 1.630878 GTGTCTGGATGGGACTTTCCT 59.369 52.381 0.00 0.00 36.57 3.36
2972 3130 2.040412 GTGTCTGGATGGGACTTTCCTT 59.960 50.000 0.00 0.00 36.57 3.36
2973 3131 2.040278 TGTCTGGATGGGACTTTCCTTG 59.960 50.000 0.00 0.00 36.57 3.61
2974 3132 1.635487 TCTGGATGGGACTTTCCTTGG 59.365 52.381 0.00 0.00 36.57 3.61
2975 3133 0.039618 TGGATGGGACTTTCCTTGGC 59.960 55.000 0.00 0.00 36.57 4.52
2976 3134 1.032114 GGATGGGACTTTCCTTGGCG 61.032 60.000 0.00 0.00 36.57 5.69
2977 3135 0.322546 GATGGGACTTTCCTTGGCGT 60.323 55.000 0.00 0.00 36.57 5.68
2978 3136 0.609131 ATGGGACTTTCCTTGGCGTG 60.609 55.000 0.00 0.00 36.57 5.34
2979 3137 1.971695 GGGACTTTCCTTGGCGTGG 60.972 63.158 0.00 0.00 36.57 4.94
2980 3138 1.072505 GGACTTTCCTTGGCGTGGA 59.927 57.895 0.00 0.00 32.53 4.02
2981 3139 0.536460 GGACTTTCCTTGGCGTGGAA 60.536 55.000 6.88 6.88 41.33 3.53
2982 3140 0.875059 GACTTTCCTTGGCGTGGAAG 59.125 55.000 10.20 8.04 43.48 3.46
2983 3141 0.537371 ACTTTCCTTGGCGTGGAAGG 60.537 55.000 15.33 15.33 43.48 3.46
2992 3150 2.956987 CGTGGAAGGCAAGCTTGG 59.043 61.111 27.10 9.80 0.00 3.61
2999 3157 2.709475 GGCAAGCTTGGCGATACG 59.291 61.111 33.68 4.49 43.97 3.06
3000 3158 2.709475 GCAAGCTTGGCGATACGG 59.291 61.111 27.10 0.00 0.00 4.02
3001 3159 1.813753 GCAAGCTTGGCGATACGGA 60.814 57.895 27.10 0.00 0.00 4.69
3002 3160 1.160329 GCAAGCTTGGCGATACGGAT 61.160 55.000 27.10 0.00 0.00 4.18
3003 3161 1.872237 GCAAGCTTGGCGATACGGATA 60.872 52.381 27.10 0.00 0.00 2.59
3004 3162 2.688507 CAAGCTTGGCGATACGGATAT 58.311 47.619 19.14 0.00 0.00 1.63
3005 3163 2.370281 AGCTTGGCGATACGGATATG 57.630 50.000 0.00 0.00 0.00 1.78
3006 3164 1.618837 AGCTTGGCGATACGGATATGT 59.381 47.619 0.00 0.00 0.00 2.29
3007 3165 2.823747 AGCTTGGCGATACGGATATGTA 59.176 45.455 0.00 0.00 0.00 2.29
3008 3166 3.119459 AGCTTGGCGATACGGATATGTAG 60.119 47.826 0.00 0.00 0.00 2.74
3009 3167 3.119602 GCTTGGCGATACGGATATGTAGA 60.120 47.826 0.00 0.00 0.00 2.59
3010 3168 4.440250 GCTTGGCGATACGGATATGTAGAT 60.440 45.833 0.00 0.00 0.00 1.98
3011 3169 5.651530 CTTGGCGATACGGATATGTAGATT 58.348 41.667 0.00 0.00 0.00 2.40
3012 3170 5.654603 TGGCGATACGGATATGTAGATTT 57.345 39.130 0.00 0.00 0.00 2.17
3013 3171 5.647589 TGGCGATACGGATATGTAGATTTC 58.352 41.667 0.00 0.00 0.00 2.17
3014 3172 5.041940 GGCGATACGGATATGTAGATTTCC 58.958 45.833 0.00 0.00 0.00 3.13
3015 3173 5.163540 GGCGATACGGATATGTAGATTTCCT 60.164 44.000 7.58 0.00 29.66 3.36
3016 3174 6.039047 GGCGATACGGATATGTAGATTTCCTA 59.961 42.308 7.58 1.21 29.66 2.94
3017 3175 6.911511 GCGATACGGATATGTAGATTTCCTAC 59.088 42.308 7.58 0.00 46.21 3.18
3018 3176 7.416022 CGATACGGATATGTAGATTTCCTACC 58.584 42.308 7.58 0.00 45.60 3.18
3019 3177 7.066645 CGATACGGATATGTAGATTTCCTACCA 59.933 40.741 7.58 0.00 45.60 3.25
3020 3178 8.840200 ATACGGATATGTAGATTTCCTACCAT 57.160 34.615 7.58 0.00 45.60 3.55
3021 3179 7.554959 ACGGATATGTAGATTTCCTACCATT 57.445 36.000 7.58 0.00 45.60 3.16
3022 3180 7.386851 ACGGATATGTAGATTTCCTACCATTG 58.613 38.462 7.58 0.00 45.60 2.82
3023 3181 7.016268 ACGGATATGTAGATTTCCTACCATTGT 59.984 37.037 7.58 0.00 45.60 2.71
3024 3182 8.528643 CGGATATGTAGATTTCCTACCATTGTA 58.471 37.037 7.58 0.00 45.60 2.41
3028 3186 8.964476 ATGTAGATTTCCTACCATTGTAACTG 57.036 34.615 0.00 0.00 45.60 3.16
3029 3187 8.141298 TGTAGATTTCCTACCATTGTAACTGA 57.859 34.615 0.00 0.00 45.60 3.41
3030 3188 8.038944 TGTAGATTTCCTACCATTGTAACTGAC 58.961 37.037 0.00 0.00 45.60 3.51
3031 3189 7.259088 AGATTTCCTACCATTGTAACTGACT 57.741 36.000 0.00 0.00 0.00 3.41
3032 3190 7.331791 AGATTTCCTACCATTGTAACTGACTC 58.668 38.462 0.00 0.00 0.00 3.36
3033 3191 6.681729 TTTCCTACCATTGTAACTGACTCT 57.318 37.500 0.00 0.00 0.00 3.24
3034 3192 5.661056 TCCTACCATTGTAACTGACTCTG 57.339 43.478 0.00 0.00 0.00 3.35
3035 3193 5.084519 TCCTACCATTGTAACTGACTCTGT 58.915 41.667 0.00 0.00 0.00 3.41
3036 3194 5.047306 TCCTACCATTGTAACTGACTCTGTG 60.047 44.000 0.00 0.00 0.00 3.66
3037 3195 4.689612 ACCATTGTAACTGACTCTGTGT 57.310 40.909 0.00 0.00 0.00 3.72
3038 3196 5.801531 ACCATTGTAACTGACTCTGTGTA 57.198 39.130 0.00 0.00 0.00 2.90
3039 3197 6.169557 ACCATTGTAACTGACTCTGTGTAA 57.830 37.500 0.00 0.00 0.00 2.41
3040 3198 5.989777 ACCATTGTAACTGACTCTGTGTAAC 59.010 40.000 0.00 0.00 37.35 2.50
3041 3199 5.408604 CCATTGTAACTGACTCTGTGTAACC 59.591 44.000 0.00 0.00 34.36 2.85
3042 3200 4.595762 TGTAACTGACTCTGTGTAACCC 57.404 45.455 0.00 0.00 34.36 4.11
3043 3201 4.220724 TGTAACTGACTCTGTGTAACCCT 58.779 43.478 0.00 0.00 34.36 4.34
3044 3202 5.387788 TGTAACTGACTCTGTGTAACCCTA 58.612 41.667 0.00 0.00 34.36 3.53
3045 3203 5.475909 TGTAACTGACTCTGTGTAACCCTAG 59.524 44.000 0.00 0.00 34.36 3.02
3046 3204 2.826725 ACTGACTCTGTGTAACCCTAGC 59.173 50.000 0.00 0.00 34.36 3.42
3047 3205 2.166664 CTGACTCTGTGTAACCCTAGCC 59.833 54.545 0.00 0.00 34.36 3.93
3048 3206 1.481363 GACTCTGTGTAACCCTAGCCC 59.519 57.143 0.00 0.00 34.36 5.19
3049 3207 1.078989 ACTCTGTGTAACCCTAGCCCT 59.921 52.381 0.00 0.00 34.36 5.19
3050 3208 1.757699 CTCTGTGTAACCCTAGCCCTC 59.242 57.143 0.00 0.00 34.36 4.30
3051 3209 1.361543 TCTGTGTAACCCTAGCCCTCT 59.638 52.381 0.00 0.00 34.36 3.69
3052 3210 1.757699 CTGTGTAACCCTAGCCCTCTC 59.242 57.143 0.00 0.00 34.36 3.20
3053 3211 1.121378 GTGTAACCCTAGCCCTCTCC 58.879 60.000 0.00 0.00 0.00 3.71
3054 3212 0.396695 TGTAACCCTAGCCCTCTCCG 60.397 60.000 0.00 0.00 0.00 4.63
3055 3213 1.114119 GTAACCCTAGCCCTCTCCGG 61.114 65.000 0.00 0.00 0.00 5.14
3056 3214 1.587522 TAACCCTAGCCCTCTCCGGT 61.588 60.000 0.00 0.00 0.00 5.28
3057 3215 2.840102 CCCTAGCCCTCTCCGGTG 60.840 72.222 0.00 0.00 0.00 4.94
3058 3216 2.042843 CCTAGCCCTCTCCGGTGT 60.043 66.667 0.00 0.00 0.00 4.16
3059 3217 2.128507 CCTAGCCCTCTCCGGTGTC 61.129 68.421 0.00 0.00 0.00 3.67
3060 3218 1.076632 CTAGCCCTCTCCGGTGTCT 60.077 63.158 0.00 0.00 0.00 3.41
3061 3219 0.183014 CTAGCCCTCTCCGGTGTCTA 59.817 60.000 0.00 0.05 0.00 2.59
3062 3220 0.851469 TAGCCCTCTCCGGTGTCTAT 59.149 55.000 0.00 0.00 0.00 1.98
3063 3221 0.851469 AGCCCTCTCCGGTGTCTATA 59.149 55.000 0.00 0.00 0.00 1.31
3064 3222 1.429687 AGCCCTCTCCGGTGTCTATAT 59.570 52.381 0.00 0.00 0.00 0.86
3065 3223 2.648304 AGCCCTCTCCGGTGTCTATATA 59.352 50.000 0.00 0.00 0.00 0.86
3066 3224 3.075582 AGCCCTCTCCGGTGTCTATATAA 59.924 47.826 0.00 0.00 0.00 0.98
3067 3225 3.830755 GCCCTCTCCGGTGTCTATATAAA 59.169 47.826 0.00 0.00 0.00 1.40
3068 3226 4.321824 GCCCTCTCCGGTGTCTATATAAAC 60.322 50.000 0.00 0.00 0.00 2.01
3069 3227 4.220163 CCCTCTCCGGTGTCTATATAAACC 59.780 50.000 0.00 0.68 0.00 3.27
3076 3234 4.251268 GGTGTCTATATAAACCGGATGGC 58.749 47.826 9.46 0.00 39.70 4.40
3077 3235 4.020485 GGTGTCTATATAAACCGGATGGCT 60.020 45.833 9.46 0.00 39.70 4.75
3078 3236 5.512576 GGTGTCTATATAAACCGGATGGCTT 60.513 44.000 9.46 0.00 39.70 4.35
3079 3237 5.995897 GTGTCTATATAAACCGGATGGCTTT 59.004 40.000 9.46 0.00 39.70 3.51
3080 3238 7.156673 GTGTCTATATAAACCGGATGGCTTTA 58.843 38.462 9.46 1.94 39.70 1.85
3081 3239 7.331193 GTGTCTATATAAACCGGATGGCTTTAG 59.669 40.741 9.46 1.01 39.70 1.85
3082 3240 7.015877 TGTCTATATAAACCGGATGGCTTTAGT 59.984 37.037 9.46 0.00 39.70 2.24
3083 3241 7.544915 GTCTATATAAACCGGATGGCTTTAGTC 59.455 40.741 9.46 0.00 39.70 2.59
3084 3242 2.124277 AAACCGGATGGCTTTAGTCC 57.876 50.000 9.46 0.00 39.70 3.85
3085 3243 0.988832 AACCGGATGGCTTTAGTCCA 59.011 50.000 9.46 0.00 39.70 4.02
3086 3244 1.213296 ACCGGATGGCTTTAGTCCAT 58.787 50.000 9.46 5.70 46.35 3.41
3087 3245 2.404559 ACCGGATGGCTTTAGTCCATA 58.595 47.619 9.46 0.00 43.90 2.74
3088 3246 2.368875 ACCGGATGGCTTTAGTCCATAG 59.631 50.000 9.46 4.55 43.90 2.23
3089 3247 2.289694 CCGGATGGCTTTAGTCCATAGG 60.290 54.545 0.00 8.28 43.90 2.57
3090 3248 2.632996 CGGATGGCTTTAGTCCATAGGA 59.367 50.000 5.92 0.00 43.90 2.94
3102 3260 4.859629 GTCCATAGGACGAACAACAATC 57.140 45.455 0.00 0.00 43.14 2.67
3103 3261 4.250464 GTCCATAGGACGAACAACAATCA 58.750 43.478 0.00 0.00 43.14 2.57
3104 3262 4.876107 GTCCATAGGACGAACAACAATCAT 59.124 41.667 0.00 0.00 43.14 2.45
3105 3263 6.046593 GTCCATAGGACGAACAACAATCATA 58.953 40.000 0.00 0.00 43.14 2.15
3106 3264 6.018994 GTCCATAGGACGAACAACAATCATAC 60.019 42.308 0.00 0.00 43.14 2.39
3107 3265 5.236478 CCATAGGACGAACAACAATCATACC 59.764 44.000 0.00 0.00 0.00 2.73
3108 3266 4.280436 AGGACGAACAACAATCATACCA 57.720 40.909 0.00 0.00 0.00 3.25
3109 3267 4.843728 AGGACGAACAACAATCATACCAT 58.156 39.130 0.00 0.00 0.00 3.55
3110 3268 5.984725 AGGACGAACAACAATCATACCATA 58.015 37.500 0.00 0.00 0.00 2.74
3111 3269 6.049149 AGGACGAACAACAATCATACCATAG 58.951 40.000 0.00 0.00 0.00 2.23
3112 3270 5.236478 GGACGAACAACAATCATACCATAGG 59.764 44.000 0.00 0.00 0.00 2.57
3113 3271 4.574828 ACGAACAACAATCATACCATAGGC 59.425 41.667 0.00 0.00 0.00 3.93
3114 3272 4.816385 CGAACAACAATCATACCATAGGCT 59.184 41.667 0.00 0.00 0.00 4.58
3115 3273 5.989168 CGAACAACAATCATACCATAGGCTA 59.011 40.000 0.00 0.00 0.00 3.93
3116 3274 6.146184 CGAACAACAATCATACCATAGGCTAG 59.854 42.308 0.00 0.00 0.00 3.42
3117 3275 5.308825 ACAACAATCATACCATAGGCTAGC 58.691 41.667 6.04 6.04 0.00 3.42
3118 3276 5.072329 ACAACAATCATACCATAGGCTAGCT 59.928 40.000 15.72 3.22 0.00 3.32
3119 3277 5.832539 ACAATCATACCATAGGCTAGCTT 57.167 39.130 15.72 10.11 0.00 3.74
3120 3278 5.799213 ACAATCATACCATAGGCTAGCTTC 58.201 41.667 15.72 0.00 0.00 3.86
3121 3279 5.545723 ACAATCATACCATAGGCTAGCTTCT 59.454 40.000 15.72 6.71 0.00 2.85
3122 3280 6.726299 ACAATCATACCATAGGCTAGCTTCTA 59.274 38.462 15.72 8.91 0.00 2.10
3123 3281 7.093552 ACAATCATACCATAGGCTAGCTTCTAG 60.094 40.741 15.72 3.93 0.00 2.43
3124 3282 5.265191 TCATACCATAGGCTAGCTTCTAGG 58.735 45.833 15.72 12.08 0.00 3.02
3125 3283 2.896039 ACCATAGGCTAGCTTCTAGGG 58.104 52.381 22.47 22.47 41.57 3.53
3126 3284 2.180308 ACCATAGGCTAGCTTCTAGGGT 59.820 50.000 23.48 23.48 43.27 4.34
3127 3285 3.243724 CCATAGGCTAGCTTCTAGGGTT 58.756 50.000 18.28 0.00 34.00 4.11
3128 3286 3.648545 CCATAGGCTAGCTTCTAGGGTTT 59.351 47.826 18.28 0.00 34.00 3.27
3129 3287 4.838986 CCATAGGCTAGCTTCTAGGGTTTA 59.161 45.833 18.28 0.00 34.00 2.01
3130 3288 5.046950 CCATAGGCTAGCTTCTAGGGTTTAG 60.047 48.000 18.28 0.00 34.00 1.85
3131 3289 2.701423 AGGCTAGCTTCTAGGGTTTAGC 59.299 50.000 15.72 0.00 34.32 3.09
3132 3290 2.224329 GGCTAGCTTCTAGGGTTTAGCC 60.224 54.545 15.72 15.56 44.26 3.93
3133 3291 2.701423 GCTAGCTTCTAGGGTTTAGCCT 59.299 50.000 7.70 5.72 37.43 4.58
3134 3292 3.243941 GCTAGCTTCTAGGGTTTAGCCTC 60.244 52.174 7.70 0.00 37.43 4.70
3135 3293 2.120312 AGCTTCTAGGGTTTAGCCTCC 58.880 52.381 3.32 0.00 37.43 4.30
3136 3294 2.120312 GCTTCTAGGGTTTAGCCTCCT 58.880 52.381 3.32 0.00 37.43 3.69
3137 3295 2.506231 GCTTCTAGGGTTTAGCCTCCTT 59.494 50.000 3.32 0.00 37.43 3.36
3138 3296 3.682999 GCTTCTAGGGTTTAGCCTCCTTG 60.683 52.174 3.32 0.00 37.43 3.61
3139 3297 3.484953 TCTAGGGTTTAGCCTCCTTGA 57.515 47.619 3.32 0.00 37.43 3.02
3140 3298 4.008916 TCTAGGGTTTAGCCTCCTTGAT 57.991 45.455 3.32 0.00 37.43 2.57
3141 3299 3.967987 TCTAGGGTTTAGCCTCCTTGATC 59.032 47.826 3.32 0.00 37.43 2.92
3142 3300 2.852130 AGGGTTTAGCCTCCTTGATCT 58.148 47.619 0.00 0.00 37.43 2.75
3143 3301 2.774809 AGGGTTTAGCCTCCTTGATCTC 59.225 50.000 0.00 0.00 37.43 2.75
3144 3302 2.483889 GGGTTTAGCCTCCTTGATCTCG 60.484 54.545 0.00 0.00 37.43 4.04
3145 3303 2.168728 GGTTTAGCCTCCTTGATCTCGT 59.831 50.000 0.00 0.00 0.00 4.18
3146 3304 3.190874 GTTTAGCCTCCTTGATCTCGTG 58.809 50.000 0.00 0.00 0.00 4.35
3147 3305 1.403814 TAGCCTCCTTGATCTCGTGG 58.596 55.000 0.00 0.00 0.00 4.94
3148 3306 0.616111 AGCCTCCTTGATCTCGTGGT 60.616 55.000 0.00 0.00 0.00 4.16
3149 3307 1.112113 GCCTCCTTGATCTCGTGGTA 58.888 55.000 0.00 0.00 0.00 3.25
3150 3308 1.067821 GCCTCCTTGATCTCGTGGTAG 59.932 57.143 0.00 0.00 0.00 3.18
3151 3309 2.656002 CCTCCTTGATCTCGTGGTAGA 58.344 52.381 0.00 0.00 0.00 2.59
3152 3310 3.226777 CCTCCTTGATCTCGTGGTAGAT 58.773 50.000 0.00 0.00 38.95 1.98
3167 3325 5.401531 TGGTAGATCCACTCTTGTAACAC 57.598 43.478 0.00 0.00 41.93 3.32
3168 3326 4.836175 TGGTAGATCCACTCTTGTAACACA 59.164 41.667 0.00 0.00 41.93 3.72
3169 3327 5.169295 GGTAGATCCACTCTTGTAACACAC 58.831 45.833 0.00 0.00 35.28 3.82
3170 3328 4.955811 AGATCCACTCTTGTAACACACA 57.044 40.909 0.00 0.00 34.51 3.72
3171 3329 5.489792 AGATCCACTCTTGTAACACACAT 57.510 39.130 0.00 0.00 36.90 3.21
3172 3330 5.482908 AGATCCACTCTTGTAACACACATC 58.517 41.667 0.00 0.00 36.90 3.06
3173 3331 4.681074 TCCACTCTTGTAACACACATCA 57.319 40.909 0.00 0.00 36.90 3.07
3174 3332 5.227569 TCCACTCTTGTAACACACATCAT 57.772 39.130 0.00 0.00 36.90 2.45
3175 3333 5.237815 TCCACTCTTGTAACACACATCATC 58.762 41.667 0.00 0.00 36.90 2.92
3176 3334 4.996758 CCACTCTTGTAACACACATCATCA 59.003 41.667 0.00 0.00 36.90 3.07
3177 3335 5.469760 CCACTCTTGTAACACACATCATCAA 59.530 40.000 0.00 0.00 36.90 2.57
3178 3336 6.149973 CCACTCTTGTAACACACATCATCAAT 59.850 38.462 0.00 0.00 36.90 2.57
3179 3337 7.334171 CCACTCTTGTAACACACATCATCAATA 59.666 37.037 0.00 0.00 36.90 1.90
3180 3338 8.886719 CACTCTTGTAACACACATCATCAATAT 58.113 33.333 0.00 0.00 36.90 1.28
3181 3339 9.453572 ACTCTTGTAACACACATCATCAATATT 57.546 29.630 0.00 0.00 36.90 1.28
3189 3347 9.740239 AACACACATCATCAATATTAATCAAGC 57.260 29.630 0.00 0.00 0.00 4.01
3190 3348 8.905850 ACACACATCATCAATATTAATCAAGCA 58.094 29.630 0.00 0.00 0.00 3.91
3191 3349 9.394477 CACACATCATCAATATTAATCAAGCAG 57.606 33.333 0.00 0.00 0.00 4.24
3192 3350 8.573885 ACACATCATCAATATTAATCAAGCAGG 58.426 33.333 0.00 0.00 0.00 4.85
3193 3351 8.789762 CACATCATCAATATTAATCAAGCAGGA 58.210 33.333 0.00 0.00 0.00 3.86
3194 3352 8.790718 ACATCATCAATATTAATCAAGCAGGAC 58.209 33.333 0.00 0.00 0.00 3.85
3195 3353 7.425577 TCATCAATATTAATCAAGCAGGACG 57.574 36.000 0.00 0.00 0.00 4.79
3196 3354 6.992123 TCATCAATATTAATCAAGCAGGACGT 59.008 34.615 0.00 0.00 0.00 4.34
3197 3355 6.603237 TCAATATTAATCAAGCAGGACGTG 57.397 37.500 0.00 0.00 0.00 4.49
3198 3356 5.527214 TCAATATTAATCAAGCAGGACGTGG 59.473 40.000 0.00 0.00 0.00 4.94
3199 3357 2.107950 TTAATCAAGCAGGACGTGGG 57.892 50.000 0.00 0.00 0.00 4.61
3200 3358 0.251916 TAATCAAGCAGGACGTGGGG 59.748 55.000 0.00 0.00 0.00 4.96
3201 3359 1.779061 AATCAAGCAGGACGTGGGGT 61.779 55.000 0.00 0.00 0.00 4.95
3202 3360 1.779061 ATCAAGCAGGACGTGGGGTT 61.779 55.000 0.00 0.00 0.00 4.11
3203 3361 1.528309 CAAGCAGGACGTGGGGTTT 60.528 57.895 0.00 0.00 0.00 3.27
3204 3362 1.106944 CAAGCAGGACGTGGGGTTTT 61.107 55.000 0.00 0.00 0.00 2.43
3205 3363 0.475044 AAGCAGGACGTGGGGTTTTA 59.525 50.000 0.00 0.00 0.00 1.52
3206 3364 0.250597 AGCAGGACGTGGGGTTTTAC 60.251 55.000 0.00 0.00 0.00 2.01
3207 3365 1.239296 GCAGGACGTGGGGTTTTACC 61.239 60.000 0.00 0.00 37.60 2.85
3208 3366 0.399075 CAGGACGTGGGGTTTTACCT 59.601 55.000 0.00 0.00 38.64 3.08
3209 3367 0.689055 AGGACGTGGGGTTTTACCTC 59.311 55.000 0.00 0.00 39.92 3.85
3210 3368 0.321919 GGACGTGGGGTTTTACCTCC 60.322 60.000 0.00 0.00 38.22 4.30
3211 3369 0.397564 GACGTGGGGTTTTACCTCCA 59.602 55.000 0.00 0.00 38.22 3.86
3212 3370 1.003928 GACGTGGGGTTTTACCTCCAT 59.996 52.381 0.00 0.00 38.22 3.41
3213 3371 1.003928 ACGTGGGGTTTTACCTCCATC 59.996 52.381 8.62 4.04 38.22 3.51
3214 3372 1.003812 CGTGGGGTTTTACCTCCATCA 59.996 52.381 8.62 0.00 38.22 3.07
3215 3373 2.553466 CGTGGGGTTTTACCTCCATCAA 60.553 50.000 8.62 0.00 38.22 2.57
3216 3374 3.089284 GTGGGGTTTTACCTCCATCAAG 58.911 50.000 8.62 0.00 38.22 3.02
3217 3375 2.990284 TGGGGTTTTACCTCCATCAAGA 59.010 45.455 0.00 0.00 38.22 3.02
3218 3376 3.010138 TGGGGTTTTACCTCCATCAAGAG 59.990 47.826 0.00 0.00 38.22 2.85
3224 3382 2.507944 CTCCATCAAGAGGGCCCG 59.492 66.667 18.44 1.05 31.15 6.13
3225 3383 2.040442 TCCATCAAGAGGGCCCGA 59.960 61.111 18.44 8.04 31.15 5.14
3226 3384 1.615124 TCCATCAAGAGGGCCCGAA 60.615 57.895 18.44 1.01 31.15 4.30
3227 3385 1.452108 CCATCAAGAGGGCCCGAAC 60.452 63.158 18.44 12.45 0.00 3.95
3228 3386 1.452108 CATCAAGAGGGCCCGAACC 60.452 63.158 18.44 7.31 0.00 3.62
3229 3387 1.616628 ATCAAGAGGGCCCGAACCT 60.617 57.895 18.44 9.75 42.18 3.50
3230 3388 1.915078 ATCAAGAGGGCCCGAACCTG 61.915 60.000 18.44 12.14 38.79 4.00
3231 3389 3.330720 AAGAGGGCCCGAACCTGG 61.331 66.667 18.44 0.00 38.79 4.45
3239 3397 3.729726 CCCGAACCTGGGTAAAACA 57.270 52.632 0.00 0.00 44.76 2.83
3240 3398 2.209690 CCCGAACCTGGGTAAAACAT 57.790 50.000 0.00 0.00 44.76 2.71
3241 3399 2.089201 CCCGAACCTGGGTAAAACATC 58.911 52.381 0.00 0.00 44.76 3.06
3242 3400 1.735571 CCGAACCTGGGTAAAACATCG 59.264 52.381 0.00 0.00 0.00 3.84
3243 3401 2.419667 CGAACCTGGGTAAAACATCGT 58.580 47.619 0.00 0.00 0.00 3.73
3244 3402 2.158841 CGAACCTGGGTAAAACATCGTG 59.841 50.000 0.00 0.00 0.00 4.35
3245 3403 2.943036 ACCTGGGTAAAACATCGTGT 57.057 45.000 0.00 0.00 0.00 4.49
3246 3404 2.774687 ACCTGGGTAAAACATCGTGTC 58.225 47.619 0.00 0.00 0.00 3.67
3247 3405 2.081462 CCTGGGTAAAACATCGTGTCC 58.919 52.381 0.00 0.00 0.00 4.02
3248 3406 2.081462 CTGGGTAAAACATCGTGTCCC 58.919 52.381 0.00 0.00 0.00 4.46
3249 3407 1.700739 TGGGTAAAACATCGTGTCCCT 59.299 47.619 11.28 0.00 35.00 4.20
3250 3408 2.289819 TGGGTAAAACATCGTGTCCCTC 60.290 50.000 11.28 0.00 35.00 4.30
3251 3409 1.997606 GGTAAAACATCGTGTCCCTCG 59.002 52.381 0.00 0.00 0.00 4.63
3252 3410 2.611224 GGTAAAACATCGTGTCCCTCGT 60.611 50.000 0.00 0.00 0.00 4.18
3253 3411 1.792006 AAAACATCGTGTCCCTCGTC 58.208 50.000 0.00 0.00 0.00 4.20
3254 3412 0.966920 AAACATCGTGTCCCTCGTCT 59.033 50.000 0.00 0.00 0.00 4.18
3255 3413 0.526662 AACATCGTGTCCCTCGTCTC 59.473 55.000 0.00 0.00 0.00 3.36
3256 3414 1.313812 ACATCGTGTCCCTCGTCTCC 61.314 60.000 0.00 0.00 0.00 3.71
3257 3415 1.032657 CATCGTGTCCCTCGTCTCCT 61.033 60.000 0.00 0.00 0.00 3.69
3258 3416 1.032657 ATCGTGTCCCTCGTCTCCTG 61.033 60.000 0.00 0.00 0.00 3.86
3259 3417 1.972223 CGTGTCCCTCGTCTCCTGT 60.972 63.158 0.00 0.00 0.00 4.00
3260 3418 1.524863 CGTGTCCCTCGTCTCCTGTT 61.525 60.000 0.00 0.00 0.00 3.16
3261 3419 1.542492 GTGTCCCTCGTCTCCTGTTA 58.458 55.000 0.00 0.00 0.00 2.41
3262 3420 1.201880 GTGTCCCTCGTCTCCTGTTAC 59.798 57.143 0.00 0.00 0.00 2.50
3263 3421 0.816373 GTCCCTCGTCTCCTGTTACC 59.184 60.000 0.00 0.00 0.00 2.85
3264 3422 0.406750 TCCCTCGTCTCCTGTTACCA 59.593 55.000 0.00 0.00 0.00 3.25
3265 3423 1.006758 TCCCTCGTCTCCTGTTACCAT 59.993 52.381 0.00 0.00 0.00 3.55
3266 3424 1.409427 CCCTCGTCTCCTGTTACCATC 59.591 57.143 0.00 0.00 0.00 3.51
3267 3425 1.409427 CCTCGTCTCCTGTTACCATCC 59.591 57.143 0.00 0.00 0.00 3.51
3268 3426 1.065701 CTCGTCTCCTGTTACCATCCG 59.934 57.143 0.00 0.00 0.00 4.18
3269 3427 0.527817 CGTCTCCTGTTACCATCCGC 60.528 60.000 0.00 0.00 0.00 5.54
3270 3428 0.179081 GTCTCCTGTTACCATCCGCC 60.179 60.000 0.00 0.00 0.00 6.13
3271 3429 0.325296 TCTCCTGTTACCATCCGCCT 60.325 55.000 0.00 0.00 0.00 5.52
3272 3430 1.063492 TCTCCTGTTACCATCCGCCTA 60.063 52.381 0.00 0.00 0.00 3.93
3273 3431 1.341531 CTCCTGTTACCATCCGCCTAG 59.658 57.143 0.00 0.00 0.00 3.02
3274 3432 1.063492 TCCTGTTACCATCCGCCTAGA 60.063 52.381 0.00 0.00 0.00 2.43
3275 3433 1.068741 CCTGTTACCATCCGCCTAGAC 59.931 57.143 0.00 0.00 0.00 2.59
3276 3434 0.742505 TGTTACCATCCGCCTAGACG 59.257 55.000 0.00 0.00 0.00 4.18
3277 3435 0.596859 GTTACCATCCGCCTAGACGC 60.597 60.000 0.00 0.00 0.00 5.19
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
74 75 6.069331 GGAGGGAGTATTGTCTATAGTGACA 58.931 44.000 0.00 0.00 44.17 3.58
122 123 3.533606 ACTAGCACACAATCTAGGCTG 57.466 47.619 0.00 0.00 37.26 4.85
140 141 4.967442 GGGGAGGGTAAACAGATAAGTACT 59.033 45.833 0.00 0.00 0.00 2.73
152 153 1.864669 ATTACGTCGGGGAGGGTAAA 58.135 50.000 0.00 0.00 0.00 2.01
165 166 9.675464 TGACTTTATCTCCCAAATTAATTACGT 57.325 29.630 0.01 0.00 0.00 3.57
188 189 0.523072 AGCCAATCGTGCATGTTGAC 59.477 50.000 17.46 9.78 0.00 3.18
196 197 1.442526 CCATCTCCAGCCAATCGTGC 61.443 60.000 0.00 0.00 0.00 5.34
197 198 0.816825 CCCATCTCCAGCCAATCGTG 60.817 60.000 0.00 0.00 0.00 4.35
224 225 6.410540 ACTTAGCTTCATCTCCTGGTTTAAG 58.589 40.000 0.00 0.00 0.00 1.85
231 232 4.800993 CACGTAACTTAGCTTCATCTCCTG 59.199 45.833 0.00 0.00 0.00 3.86
242 243 5.050567 CGATTTTATCCCCACGTAACTTAGC 60.051 44.000 0.00 0.00 0.00 3.09
251 252 2.478894 CCGATTCGATTTTATCCCCACG 59.521 50.000 7.83 0.00 0.00 4.94
252 253 3.735591 TCCGATTCGATTTTATCCCCAC 58.264 45.455 7.83 0.00 0.00 4.61
266 267 8.431593 CAGATCTCTCGATTTAAATTCCGATTC 58.568 37.037 11.14 7.51 0.00 2.52
273 274 8.792830 TTTCACCAGATCTCTCGATTTAAATT 57.207 30.769 1.43 0.00 0.00 1.82
281 282 5.292765 GCAATATTTCACCAGATCTCTCGA 58.707 41.667 0.00 0.00 0.00 4.04
283 284 5.176590 GTCGCAATATTTCACCAGATCTCTC 59.823 44.000 0.00 0.00 0.00 3.20
314 315 3.057019 TGATTAATAAGCGCGCTCGATT 58.943 40.909 36.57 33.35 46.72 3.34
339 340 2.543067 ATTCCAGCGAGACCAAGGGC 62.543 60.000 0.00 0.00 0.00 5.19
403 404 7.818446 GGAAAAGTAGTAGGAAAACTCTGGTAG 59.182 40.741 0.00 0.00 0.00 3.18
408 409 7.613551 TCAGGAAAAGTAGTAGGAAAACTCT 57.386 36.000 0.00 0.00 0.00 3.24
428 429 5.878406 AACACCTACTATCTCCATTCAGG 57.122 43.478 0.00 0.00 39.47 3.86
448 449 6.877611 TTCAGTCTTCCCTTTTGTGATAAC 57.122 37.500 0.00 0.00 0.00 1.89
487 489 8.814038 ACCATTTCAGTCTTAGCTTGAAATAT 57.186 30.769 18.35 10.27 37.17 1.28
630 634 9.436957 TTTTGCCGCCTATTATTTTAAATTTCA 57.563 25.926 0.00 0.00 0.00 2.69
631 635 9.697250 GTTTTGCCGCCTATTATTTTAAATTTC 57.303 29.630 0.00 0.00 0.00 2.17
937 942 3.567478 AACCAAGTTCTGAGCTCAGTT 57.433 42.857 36.32 23.98 44.12 3.16
1042 1049 2.494870 GGCTAAGTACGTTGGAGAGGAA 59.505 50.000 0.00 0.00 0.00 3.36
1052 1059 1.307097 CGCTCCTAGGCTAAGTACGT 58.693 55.000 2.96 0.00 0.00 3.57
1155 1162 4.125703 CAGAGTTTCTATCCATGGTGAGC 58.874 47.826 12.58 6.26 0.00 4.26
1200 1207 9.072375 GATCGGAGGAAGTATCATATATGATGA 57.928 37.037 30.33 18.85 46.34 2.92
1232 1239 3.004024 AGTTCAAAGCTGCGACATTTG 57.996 42.857 5.92 5.92 35.68 2.32
1239 1246 4.209452 TCAACTTAAGTTCAAAGCTGCG 57.791 40.909 18.00 4.25 35.83 5.18
1419 1427 2.490217 CAGCTCCTACACCCGACG 59.510 66.667 0.00 0.00 0.00 5.12
1543 1551 6.881065 GGAAATGGCTGAGCATATAAGATGTA 59.119 38.462 6.82 0.00 0.00 2.29
1618 1630 1.006102 CGGGTTCTGTCGTGAGCTT 60.006 57.895 0.00 0.00 0.00 3.74
1638 1650 0.528924 CCTCGTCGTGGTCACCATAA 59.471 55.000 0.00 0.00 35.28 1.90
1680 1692 1.672030 CACTGGCTTGCCATCGACA 60.672 57.895 15.21 0.00 0.00 4.35
1835 1847 8.171337 AGTAGGAACAAAAATAATAGGGACCT 57.829 34.615 0.00 0.00 0.00 3.85
2181 2225 8.165239 TGTACTTGCTCTTGATGTTTTTGTAT 57.835 30.769 0.00 0.00 0.00 2.29
2280 2324 2.634600 ACGACCACACAAAAAGCTACA 58.365 42.857 0.00 0.00 0.00 2.74
2289 2333 7.932335 AGATAAATTTGTTTACGACCACACAA 58.068 30.769 0.00 0.00 0.00 3.33
2529 2678 1.275856 GCAAGCCCCAATTGTCAATGA 59.724 47.619 4.43 0.00 0.00 2.57
2543 2692 2.029844 GTCCAGTCGTCAGCAAGCC 61.030 63.158 0.00 0.00 0.00 4.35
2544 2693 0.601311 AAGTCCAGTCGTCAGCAAGC 60.601 55.000 0.00 0.00 0.00 4.01
2545 2694 1.269778 TGAAGTCCAGTCGTCAGCAAG 60.270 52.381 0.00 0.00 0.00 4.01
2546 2695 0.750249 TGAAGTCCAGTCGTCAGCAA 59.250 50.000 0.00 0.00 0.00 3.91
2547 2696 0.315251 CTGAAGTCCAGTCGTCAGCA 59.685 55.000 0.00 0.00 37.20 4.41
2548 2697 0.389166 CCTGAAGTCCAGTCGTCAGC 60.389 60.000 3.17 0.00 40.63 4.26
2549 2698 0.962489 ACCTGAAGTCCAGTCGTCAG 59.038 55.000 0.00 0.00 41.33 3.51
2550 2699 0.673985 CACCTGAAGTCCAGTCGTCA 59.326 55.000 0.00 0.00 41.33 4.35
2551 2700 0.038159 CCACCTGAAGTCCAGTCGTC 60.038 60.000 0.00 0.00 41.33 4.20
2553 2702 0.393077 AACCACCTGAAGTCCAGTCG 59.607 55.000 0.00 0.00 41.33 4.18
2554 2703 2.640316 AAACCACCTGAAGTCCAGTC 57.360 50.000 0.00 0.00 41.33 3.51
2555 2704 3.650942 TCATAAACCACCTGAAGTCCAGT 59.349 43.478 0.00 0.00 41.33 4.00
2556 2705 4.286297 TCATAAACCACCTGAAGTCCAG 57.714 45.455 0.00 0.00 42.55 3.86
2557 2706 4.288366 TCATCATAAACCACCTGAAGTCCA 59.712 41.667 0.00 0.00 0.00 4.02
2558 2707 4.843728 TCATCATAAACCACCTGAAGTCC 58.156 43.478 0.00 0.00 0.00 3.85
2559 2708 6.173339 TCTTCATCATAAACCACCTGAAGTC 58.827 40.000 9.23 0.00 40.13 3.01
2609 2758 2.107378 TGCAGAATCAAGGGGTTGTGTA 59.893 45.455 0.00 0.00 0.00 2.90
2630 2779 9.528489 ACCAACTTCAAATATGGTAAATACAGT 57.472 29.630 0.00 0.00 44.11 3.55
2631 2780 9.787532 CACCAACTTCAAATATGGTAAATACAG 57.212 33.333 0.00 0.00 44.12 2.74
2632 2781 9.303116 ACACCAACTTCAAATATGGTAAATACA 57.697 29.630 0.00 0.00 44.12 2.29
2653 2811 1.663739 GTAGTCCAGTGCGACACCA 59.336 57.895 12.45 0.00 34.49 4.17
2724 2882 7.494298 GGTCATCAAATGTTGTTGGTAGTTTTT 59.506 33.333 0.55 0.00 32.56 1.94
2744 2902 7.476492 GTGTTTAAATCGTCTAAAACGGTCATC 59.524 37.037 0.00 0.00 46.16 2.92
2774 2932 1.004745 AGGTGGGGTCTGCTTGTTATG 59.995 52.381 0.00 0.00 0.00 1.90
2777 2935 1.151450 CAGGTGGGGTCTGCTTGTT 59.849 57.895 0.00 0.00 0.00 2.83
2779 2937 0.400213 TTACAGGTGGGGTCTGCTTG 59.600 55.000 0.00 0.00 35.78 4.01
2784 2942 0.475828 AGCCTTTACAGGTGGGGTCT 60.476 55.000 0.00 0.00 43.18 3.85
2787 2945 0.322546 GTCAGCCTTTACAGGTGGGG 60.323 60.000 0.00 0.00 43.18 4.96
2794 2952 1.684450 TCTGTCACGTCAGCCTTTACA 59.316 47.619 0.00 0.00 35.63 2.41
2797 2955 2.325583 TTTCTGTCACGTCAGCCTTT 57.674 45.000 0.00 0.00 35.63 3.11
2800 2958 1.527311 GACTTTTCTGTCACGTCAGCC 59.473 52.381 0.00 0.00 36.97 4.85
2802 2960 2.727777 TCGACTTTTCTGTCACGTCAG 58.272 47.619 0.00 0.00 36.82 3.51
2807 2965 1.192534 CGGCTTCGACTTTTCTGTCAC 59.807 52.381 0.00 0.00 36.82 3.67
2821 2979 2.095415 AGCGGTCAAAATAAACGGCTTC 60.095 45.455 2.24 0.00 46.09 3.86
2827 2985 5.854866 GGTCAACTTAGCGGTCAAAATAAAC 59.145 40.000 0.00 0.00 0.00 2.01
2840 2998 1.001633 TCCCTCAACGGTCAACTTAGC 59.998 52.381 0.00 0.00 0.00 3.09
2844 3002 1.070289 GAACTCCCTCAACGGTCAACT 59.930 52.381 0.00 0.00 0.00 3.16
2845 3003 1.509703 GAACTCCCTCAACGGTCAAC 58.490 55.000 0.00 0.00 0.00 3.18
2846 3004 0.395312 GGAACTCCCTCAACGGTCAA 59.605 55.000 0.00 0.00 0.00 3.18
2847 3005 1.812686 CGGAACTCCCTCAACGGTCA 61.813 60.000 0.00 0.00 0.00 4.02
2848 3006 1.080025 CGGAACTCCCTCAACGGTC 60.080 63.158 0.00 0.00 0.00 4.79
2849 3007 2.580601 CCGGAACTCCCTCAACGGT 61.581 63.158 0.00 0.00 36.78 4.83
2850 3008 2.264794 CCGGAACTCCCTCAACGG 59.735 66.667 0.00 0.00 35.01 4.44
2851 3009 1.080025 GTCCGGAACTCCCTCAACG 60.080 63.158 5.23 0.00 0.00 4.10
2852 3010 1.477295 CTAGTCCGGAACTCCCTCAAC 59.523 57.143 5.23 0.00 39.55 3.18
2853 3011 1.618888 CCTAGTCCGGAACTCCCTCAA 60.619 57.143 5.23 0.00 39.55 3.02
2854 3012 0.033405 CCTAGTCCGGAACTCCCTCA 60.033 60.000 5.23 0.00 39.55 3.86
2855 3013 0.756070 CCCTAGTCCGGAACTCCCTC 60.756 65.000 5.23 0.00 39.55 4.30
2856 3014 1.310373 CCCTAGTCCGGAACTCCCT 59.690 63.158 5.23 0.05 39.55 4.20
2857 3015 1.761271 CCCCTAGTCCGGAACTCCC 60.761 68.421 5.23 0.00 39.55 4.30
2858 3016 1.761271 CCCCCTAGTCCGGAACTCC 60.761 68.421 5.23 0.00 39.55 3.85
2859 3017 1.001376 ACCCCCTAGTCCGGAACTC 59.999 63.158 5.23 0.00 39.55 3.01
2860 3018 1.305887 CACCCCCTAGTCCGGAACT 60.306 63.158 5.23 8.86 42.33 3.01
2861 3019 1.611474 GACACCCCCTAGTCCGGAAC 61.611 65.000 5.23 0.00 0.00 3.62
2862 3020 1.305549 GACACCCCCTAGTCCGGAA 60.306 63.158 5.23 0.00 0.00 4.30
2863 3021 2.361771 GACACCCCCTAGTCCGGA 59.638 66.667 0.00 0.00 0.00 5.14
2864 3022 2.762875 GGACACCCCCTAGTCCGG 60.763 72.222 0.00 0.00 44.23 5.14
2867 3025 0.186873 TATCCGGACACCCCCTAGTC 59.813 60.000 6.12 0.00 0.00 2.59
2868 3026 0.187851 CTATCCGGACACCCCCTAGT 59.812 60.000 6.12 0.00 0.00 2.57
2869 3027 1.186267 GCTATCCGGACACCCCCTAG 61.186 65.000 6.12 3.64 0.00 3.02
2870 3028 1.152398 GCTATCCGGACACCCCCTA 60.152 63.158 6.12 0.00 0.00 3.53
2871 3029 2.446036 GCTATCCGGACACCCCCT 60.446 66.667 6.12 0.00 0.00 4.79
2872 3030 3.557290 GGCTATCCGGACACCCCC 61.557 72.222 6.12 0.00 0.00 5.40
2873 3031 1.917336 TTTGGCTATCCGGACACCCC 61.917 60.000 6.12 5.75 34.14 4.95
2874 3032 0.746923 GTTTGGCTATCCGGACACCC 60.747 60.000 6.12 7.82 34.14 4.61
2875 3033 0.252197 AGTTTGGCTATCCGGACACC 59.748 55.000 6.12 9.58 34.14 4.16
2876 3034 2.973694 TAGTTTGGCTATCCGGACAC 57.026 50.000 6.12 0.00 34.14 3.67
2877 3035 3.746045 GATAGTTTGGCTATCCGGACA 57.254 47.619 6.12 0.00 46.48 4.02
2884 3042 4.256920 GCCGATGATGATAGTTTGGCTAT 58.743 43.478 0.00 0.00 42.75 2.97
2885 3043 3.557054 GGCCGATGATGATAGTTTGGCTA 60.557 47.826 0.00 0.00 40.98 3.93
2886 3044 2.498167 GCCGATGATGATAGTTTGGCT 58.502 47.619 0.00 0.00 38.22 4.75
2887 3045 1.537202 GGCCGATGATGATAGTTTGGC 59.463 52.381 0.00 0.00 40.48 4.52
2888 3046 1.800586 CGGCCGATGATGATAGTTTGG 59.199 52.381 24.07 0.00 0.00 3.28
2889 3047 1.800586 CCGGCCGATGATGATAGTTTG 59.199 52.381 30.73 0.00 0.00 2.93
2890 3048 1.691976 TCCGGCCGATGATGATAGTTT 59.308 47.619 30.73 0.00 0.00 2.66
2891 3049 1.000955 GTCCGGCCGATGATGATAGTT 59.999 52.381 30.73 0.00 0.00 2.24
2892 3050 0.603569 GTCCGGCCGATGATGATAGT 59.396 55.000 30.73 0.00 0.00 2.12
2893 3051 0.891373 AGTCCGGCCGATGATGATAG 59.109 55.000 30.73 6.27 0.00 2.08
2894 3052 0.888619 GAGTCCGGCCGATGATGATA 59.111 55.000 30.73 0.00 0.00 2.15
2895 3053 1.668294 GAGTCCGGCCGATGATGAT 59.332 57.895 30.73 6.58 0.00 2.45
2896 3054 2.498941 GGAGTCCGGCCGATGATGA 61.499 63.158 30.73 12.55 0.00 2.92
2897 3055 2.029666 GGAGTCCGGCCGATGATG 59.970 66.667 30.73 9.82 0.00 3.07
2898 3056 2.063979 TTGGAGTCCGGCCGATGAT 61.064 57.895 30.73 9.58 0.00 2.45
2899 3057 2.682136 TTGGAGTCCGGCCGATGA 60.682 61.111 30.73 14.33 0.00 2.92
2900 3058 2.511600 GTTGGAGTCCGGCCGATG 60.512 66.667 30.73 11.63 0.00 3.84
2901 3059 3.000819 TGTTGGAGTCCGGCCGAT 61.001 61.111 30.73 12.65 0.00 4.18
2902 3060 3.998672 GTGTTGGAGTCCGGCCGA 61.999 66.667 30.73 10.38 0.00 5.54
2903 3061 1.956629 ATAGTGTTGGAGTCCGGCCG 61.957 60.000 21.04 21.04 0.00 6.13
2904 3062 0.462047 CATAGTGTTGGAGTCCGGCC 60.462 60.000 4.30 0.00 0.00 6.13
2905 3063 0.535335 TCATAGTGTTGGAGTCCGGC 59.465 55.000 4.30 0.00 0.00 6.13
2906 3064 2.496070 TCTTCATAGTGTTGGAGTCCGG 59.504 50.000 4.30 0.00 0.00 5.14
2907 3065 3.868757 TCTTCATAGTGTTGGAGTCCG 57.131 47.619 4.30 0.00 0.00 4.79
2908 3066 6.716934 TCTATCTTCATAGTGTTGGAGTCC 57.283 41.667 0.73 0.73 34.54 3.85
2909 3067 8.001881 TCTTCTATCTTCATAGTGTTGGAGTC 57.998 38.462 0.00 0.00 34.54 3.36
2910 3068 7.962995 TCTTCTATCTTCATAGTGTTGGAGT 57.037 36.000 0.00 0.00 34.54 3.85
2911 3069 9.258826 CAATCTTCTATCTTCATAGTGTTGGAG 57.741 37.037 0.00 0.00 34.54 3.86
2912 3070 8.981659 TCAATCTTCTATCTTCATAGTGTTGGA 58.018 33.333 0.00 0.00 34.54 3.53
2913 3071 9.605275 TTCAATCTTCTATCTTCATAGTGTTGG 57.395 33.333 0.00 0.00 34.54 3.77
2920 3078 9.958234 CGAAGTCTTCAATCTTCTATCTTCATA 57.042 33.333 12.99 0.00 38.20 2.15
2921 3079 8.474025 ACGAAGTCTTCAATCTTCTATCTTCAT 58.526 33.333 12.99 0.00 29.74 2.57
2922 3080 7.831753 ACGAAGTCTTCAATCTTCTATCTTCA 58.168 34.615 12.99 0.00 29.74 3.02
2946 3104 1.987855 TCCCATCCAGACACGGGAC 60.988 63.158 0.00 0.00 42.94 4.46
2947 3105 1.987855 GTCCCATCCAGACACGGGA 60.988 63.158 0.00 0.00 45.66 5.14
2948 3106 1.553690 AAGTCCCATCCAGACACGGG 61.554 60.000 0.00 0.00 40.32 5.28
2949 3107 0.324943 AAAGTCCCATCCAGACACGG 59.675 55.000 0.00 0.00 36.68 4.94
2950 3108 1.676014 GGAAAGTCCCATCCAGACACG 60.676 57.143 0.00 0.00 36.68 4.49
2951 3109 1.630878 AGGAAAGTCCCATCCAGACAC 59.369 52.381 0.00 0.00 37.19 3.67
2952 3110 2.040278 CAAGGAAAGTCCCATCCAGACA 59.960 50.000 0.00 0.00 37.19 3.41
2953 3111 2.619074 CCAAGGAAAGTCCCATCCAGAC 60.619 54.545 0.00 0.00 37.19 3.51
2954 3112 1.635487 CCAAGGAAAGTCCCATCCAGA 59.365 52.381 0.00 0.00 37.19 3.86
2955 3113 1.957113 GCCAAGGAAAGTCCCATCCAG 60.957 57.143 0.00 0.00 37.19 3.86
2956 3114 0.039618 GCCAAGGAAAGTCCCATCCA 59.960 55.000 0.00 0.00 37.19 3.41
2957 3115 1.032114 CGCCAAGGAAAGTCCCATCC 61.032 60.000 0.00 0.00 37.19 3.51
2958 3116 0.322546 ACGCCAAGGAAAGTCCCATC 60.323 55.000 0.00 0.00 37.19 3.51
2959 3117 0.609131 CACGCCAAGGAAAGTCCCAT 60.609 55.000 0.00 0.00 37.19 4.00
2960 3118 1.228124 CACGCCAAGGAAAGTCCCA 60.228 57.895 0.00 0.00 37.19 4.37
2961 3119 1.971695 CCACGCCAAGGAAAGTCCC 60.972 63.158 0.00 0.00 37.19 4.46
2962 3120 0.536460 TTCCACGCCAAGGAAAGTCC 60.536 55.000 0.00 0.00 41.94 3.85
2963 3121 0.875059 CTTCCACGCCAAGGAAAGTC 59.125 55.000 0.00 0.00 44.07 3.01
2964 3122 0.537371 CCTTCCACGCCAAGGAAAGT 60.537 55.000 2.12 0.00 44.07 2.66
2965 3123 1.866853 GCCTTCCACGCCAAGGAAAG 61.867 60.000 10.97 2.24 44.07 2.62
2966 3124 1.901464 GCCTTCCACGCCAAGGAAA 60.901 57.895 10.97 0.00 44.07 3.13
2967 3125 2.282180 GCCTTCCACGCCAAGGAA 60.282 61.111 10.97 5.63 42.94 3.36
2968 3126 3.126703 TTGCCTTCCACGCCAAGGA 62.127 57.895 10.97 0.00 42.94 3.36
2969 3127 2.597217 TTGCCTTCCACGCCAAGG 60.597 61.111 3.73 3.73 43.13 3.61
2970 3128 2.956987 CTTGCCTTCCACGCCAAG 59.043 61.111 0.00 0.00 0.00 3.61
2971 3129 3.294493 GCTTGCCTTCCACGCCAA 61.294 61.111 0.00 0.00 32.93 4.52
2972 3130 3.790416 AAGCTTGCCTTCCACGCCA 62.790 57.895 0.00 0.00 39.36 5.69
2973 3131 2.985847 AAGCTTGCCTTCCACGCC 60.986 61.111 0.00 0.00 39.36 5.68
2974 3132 2.256461 CAAGCTTGCCTTCCACGC 59.744 61.111 14.65 0.00 38.87 5.34
2975 3133 2.956987 CCAAGCTTGCCTTCCACG 59.043 61.111 21.43 0.62 0.00 4.94
2976 3134 2.653115 GCCAAGCTTGCCTTCCAC 59.347 61.111 21.43 0.12 0.00 4.02
2977 3135 2.769652 ATCGCCAAGCTTGCCTTCCA 62.770 55.000 21.43 1.33 0.00 3.53
2978 3136 0.748005 TATCGCCAAGCTTGCCTTCC 60.748 55.000 21.43 5.26 0.00 3.46
2979 3137 0.378610 GTATCGCCAAGCTTGCCTTC 59.621 55.000 21.43 8.32 0.00 3.46
2980 3138 1.369091 CGTATCGCCAAGCTTGCCTT 61.369 55.000 21.43 7.68 0.00 4.35
2981 3139 1.815421 CGTATCGCCAAGCTTGCCT 60.815 57.895 21.43 7.17 0.00 4.75
2982 3140 2.709475 CGTATCGCCAAGCTTGCC 59.291 61.111 21.43 9.45 0.00 4.52
2983 3141 1.160329 ATCCGTATCGCCAAGCTTGC 61.160 55.000 21.43 14.85 0.00 4.01
2984 3142 2.148916 TATCCGTATCGCCAAGCTTG 57.851 50.000 19.93 19.93 0.00 4.01
2985 3143 2.037251 ACATATCCGTATCGCCAAGCTT 59.963 45.455 0.00 0.00 0.00 3.74
2986 3144 1.618837 ACATATCCGTATCGCCAAGCT 59.381 47.619 0.00 0.00 0.00 3.74
2987 3145 2.080286 ACATATCCGTATCGCCAAGC 57.920 50.000 0.00 0.00 0.00 4.01
2988 3146 4.696899 TCTACATATCCGTATCGCCAAG 57.303 45.455 0.00 0.00 0.00 3.61
2989 3147 5.654603 AATCTACATATCCGTATCGCCAA 57.345 39.130 0.00 0.00 0.00 4.52
2990 3148 5.393787 GGAAATCTACATATCCGTATCGCCA 60.394 44.000 0.00 0.00 0.00 5.69
2991 3149 5.041940 GGAAATCTACATATCCGTATCGCC 58.958 45.833 0.00 0.00 0.00 5.54
2992 3150 5.892568 AGGAAATCTACATATCCGTATCGC 58.107 41.667 0.00 0.00 37.05 4.58
3005 3163 8.258708 AGTCAGTTACAATGGTAGGAAATCTAC 58.741 37.037 0.00 0.00 45.78 2.59
3006 3164 8.375493 AGTCAGTTACAATGGTAGGAAATCTA 57.625 34.615 0.00 0.00 0.00 1.98
3007 3165 7.181125 AGAGTCAGTTACAATGGTAGGAAATCT 59.819 37.037 0.00 0.00 0.00 2.40
3008 3166 7.278868 CAGAGTCAGTTACAATGGTAGGAAATC 59.721 40.741 0.00 0.00 0.00 2.17
3009 3167 7.106239 CAGAGTCAGTTACAATGGTAGGAAAT 58.894 38.462 0.00 0.00 0.00 2.17
3010 3168 6.042781 ACAGAGTCAGTTACAATGGTAGGAAA 59.957 38.462 0.00 0.00 0.00 3.13
3011 3169 5.542635 ACAGAGTCAGTTACAATGGTAGGAA 59.457 40.000 0.00 0.00 0.00 3.36
3012 3170 5.047306 CACAGAGTCAGTTACAATGGTAGGA 60.047 44.000 0.00 0.00 0.00 2.94
3013 3171 5.171476 CACAGAGTCAGTTACAATGGTAGG 58.829 45.833 0.00 0.00 0.00 3.18
3014 3172 5.784177 ACACAGAGTCAGTTACAATGGTAG 58.216 41.667 0.00 0.00 0.00 3.18
3015 3173 5.801531 ACACAGAGTCAGTTACAATGGTA 57.198 39.130 0.00 0.00 0.00 3.25
3016 3174 4.689612 ACACAGAGTCAGTTACAATGGT 57.310 40.909 0.00 0.00 0.00 3.55
3017 3175 5.408604 GGTTACACAGAGTCAGTTACAATGG 59.591 44.000 0.00 0.00 0.00 3.16
3018 3176 5.408604 GGGTTACACAGAGTCAGTTACAATG 59.591 44.000 0.00 0.00 0.00 2.82
3019 3177 5.307196 AGGGTTACACAGAGTCAGTTACAAT 59.693 40.000 0.00 0.00 0.00 2.71
3020 3178 4.652421 AGGGTTACACAGAGTCAGTTACAA 59.348 41.667 0.00 0.00 0.00 2.41
3021 3179 4.220724 AGGGTTACACAGAGTCAGTTACA 58.779 43.478 0.00 0.00 0.00 2.41
3022 3180 4.868314 AGGGTTACACAGAGTCAGTTAC 57.132 45.455 0.00 0.00 0.00 2.50
3023 3181 4.461781 GCTAGGGTTACACAGAGTCAGTTA 59.538 45.833 0.00 0.00 0.00 2.24
3024 3182 3.258622 GCTAGGGTTACACAGAGTCAGTT 59.741 47.826 0.00 0.00 0.00 3.16
3025 3183 2.826725 GCTAGGGTTACACAGAGTCAGT 59.173 50.000 0.00 0.00 0.00 3.41
3026 3184 2.166664 GGCTAGGGTTACACAGAGTCAG 59.833 54.545 0.00 0.00 0.00 3.51
3027 3185 2.176889 GGCTAGGGTTACACAGAGTCA 58.823 52.381 0.00 0.00 0.00 3.41
3028 3186 1.481363 GGGCTAGGGTTACACAGAGTC 59.519 57.143 0.00 0.00 0.00 3.36
3029 3187 1.078989 AGGGCTAGGGTTACACAGAGT 59.921 52.381 0.00 0.00 0.00 3.24
3030 3188 1.757699 GAGGGCTAGGGTTACACAGAG 59.242 57.143 0.00 0.00 0.00 3.35
3031 3189 1.361543 AGAGGGCTAGGGTTACACAGA 59.638 52.381 0.00 0.00 0.00 3.41
3032 3190 1.757699 GAGAGGGCTAGGGTTACACAG 59.242 57.143 0.00 0.00 0.00 3.66
3033 3191 1.621622 GGAGAGGGCTAGGGTTACACA 60.622 57.143 0.00 0.00 0.00 3.72
3034 3192 1.121378 GGAGAGGGCTAGGGTTACAC 58.879 60.000 0.00 0.00 0.00 2.90
3035 3193 0.396695 CGGAGAGGGCTAGGGTTACA 60.397 60.000 0.00 0.00 0.00 2.41
3036 3194 1.114119 CCGGAGAGGGCTAGGGTTAC 61.114 65.000 0.00 0.00 35.97 2.50
3037 3195 1.232216 CCGGAGAGGGCTAGGGTTA 59.768 63.158 0.00 0.00 35.97 2.85
3038 3196 2.041819 CCGGAGAGGGCTAGGGTT 60.042 66.667 0.00 0.00 35.97 4.11
3039 3197 3.357082 ACCGGAGAGGGCTAGGGT 61.357 66.667 9.46 0.00 46.96 4.34
3040 3198 2.840102 CACCGGAGAGGGCTAGGG 60.840 72.222 9.46 0.00 46.96 3.53
3041 3199 2.042843 ACACCGGAGAGGGCTAGG 60.043 66.667 9.46 0.00 46.96 3.02
3042 3200 0.183014 TAGACACCGGAGAGGGCTAG 59.817 60.000 9.46 0.00 46.96 3.42
3043 3201 0.851469 ATAGACACCGGAGAGGGCTA 59.149 55.000 9.46 6.85 46.96 3.93
3044 3202 0.851469 TATAGACACCGGAGAGGGCT 59.149 55.000 9.46 4.41 46.96 5.19
3045 3203 1.926108 ATATAGACACCGGAGAGGGC 58.074 55.000 9.46 0.00 46.96 5.19
3046 3204 4.220163 GGTTTATATAGACACCGGAGAGGG 59.780 50.000 9.46 0.00 46.96 4.30
3047 3205 4.082895 CGGTTTATATAGACACCGGAGAGG 60.083 50.000 15.65 0.00 46.92 3.69
3048 3206 5.044428 CGGTTTATATAGACACCGGAGAG 57.956 47.826 15.65 0.00 46.92 3.20
3054 3212 4.020485 AGCCATCCGGTTTATATAGACACC 60.020 45.833 0.00 2.59 33.28 4.16
3055 3213 5.148651 AGCCATCCGGTTTATATAGACAC 57.851 43.478 0.00 0.00 33.28 3.67
3056 3214 5.818678 AAGCCATCCGGTTTATATAGACA 57.181 39.130 0.00 0.00 33.26 3.41
3057 3215 7.384477 ACTAAAGCCATCCGGTTTATATAGAC 58.616 38.462 0.00 0.00 42.10 2.59
3058 3216 7.310237 GGACTAAAGCCATCCGGTTTATATAGA 60.310 40.741 0.00 0.00 42.10 1.98
3059 3217 6.817140 GGACTAAAGCCATCCGGTTTATATAG 59.183 42.308 0.00 0.50 42.10 1.31
3060 3218 6.270463 TGGACTAAAGCCATCCGGTTTATATA 59.730 38.462 0.00 0.00 42.10 0.86
3061 3219 5.072600 TGGACTAAAGCCATCCGGTTTATAT 59.927 40.000 0.00 0.00 42.10 0.86
3062 3220 4.409574 TGGACTAAAGCCATCCGGTTTATA 59.590 41.667 0.00 0.00 42.10 0.98
3063 3221 3.201266 TGGACTAAAGCCATCCGGTTTAT 59.799 43.478 0.00 0.00 42.10 1.40
3064 3222 2.572556 TGGACTAAAGCCATCCGGTTTA 59.427 45.455 0.00 0.00 42.16 2.01
3065 3223 1.353022 TGGACTAAAGCCATCCGGTTT 59.647 47.619 0.00 0.00 44.26 3.27
3066 3224 0.988832 TGGACTAAAGCCATCCGGTT 59.011 50.000 0.00 0.00 35.06 4.44
3067 3225 1.213296 ATGGACTAAAGCCATCCGGT 58.787 50.000 0.00 0.00 42.31 5.28
3068 3226 2.289694 CCTATGGACTAAAGCCATCCGG 60.290 54.545 0.00 0.00 44.70 5.14
3069 3227 2.632996 TCCTATGGACTAAAGCCATCCG 59.367 50.000 0.00 0.00 44.70 4.18
3082 3240 4.545208 TGATTGTTGTTCGTCCTATGGA 57.455 40.909 0.00 0.00 0.00 3.41
3083 3241 5.236478 GGTATGATTGTTGTTCGTCCTATGG 59.764 44.000 0.00 0.00 0.00 2.74
3084 3242 5.815222 TGGTATGATTGTTGTTCGTCCTATG 59.185 40.000 0.00 0.00 0.00 2.23
3085 3243 5.984725 TGGTATGATTGTTGTTCGTCCTAT 58.015 37.500 0.00 0.00 0.00 2.57
3086 3244 5.408880 TGGTATGATTGTTGTTCGTCCTA 57.591 39.130 0.00 0.00 0.00 2.94
3087 3245 4.280436 TGGTATGATTGTTGTTCGTCCT 57.720 40.909 0.00 0.00 0.00 3.85
3088 3246 5.236478 CCTATGGTATGATTGTTGTTCGTCC 59.764 44.000 0.00 0.00 0.00 4.79
3089 3247 5.277345 GCCTATGGTATGATTGTTGTTCGTC 60.277 44.000 0.00 0.00 0.00 4.20
3090 3248 4.574828 GCCTATGGTATGATTGTTGTTCGT 59.425 41.667 0.00 0.00 0.00 3.85
3091 3249 4.816385 AGCCTATGGTATGATTGTTGTTCG 59.184 41.667 0.00 0.00 0.00 3.95
3092 3250 6.073003 GCTAGCCTATGGTATGATTGTTGTTC 60.073 42.308 2.29 0.00 0.00 3.18
3093 3251 5.765182 GCTAGCCTATGGTATGATTGTTGTT 59.235 40.000 2.29 0.00 0.00 2.83
3094 3252 5.072329 AGCTAGCCTATGGTATGATTGTTGT 59.928 40.000 12.13 0.00 0.00 3.32
3095 3253 5.555017 AGCTAGCCTATGGTATGATTGTTG 58.445 41.667 12.13 0.00 0.00 3.33
3096 3254 5.832539 AGCTAGCCTATGGTATGATTGTT 57.167 39.130 12.13 0.00 0.00 2.83
3097 3255 5.545723 AGAAGCTAGCCTATGGTATGATTGT 59.454 40.000 12.13 0.00 0.00 2.71
3098 3256 6.047511 AGAAGCTAGCCTATGGTATGATTG 57.952 41.667 12.13 0.00 0.00 2.67
3099 3257 6.382570 CCTAGAAGCTAGCCTATGGTATGATT 59.617 42.308 12.13 0.00 0.00 2.57
3100 3258 5.896678 CCTAGAAGCTAGCCTATGGTATGAT 59.103 44.000 12.13 0.00 0.00 2.45
3101 3259 5.265191 CCTAGAAGCTAGCCTATGGTATGA 58.735 45.833 12.13 0.00 0.00 2.15
3102 3260 4.404073 CCCTAGAAGCTAGCCTATGGTATG 59.596 50.000 12.13 0.00 0.00 2.39
3103 3261 4.046103 ACCCTAGAAGCTAGCCTATGGTAT 59.954 45.833 19.36 4.05 33.87 2.73
3104 3262 3.401683 ACCCTAGAAGCTAGCCTATGGTA 59.598 47.826 19.36 2.73 33.87 3.25
3105 3263 2.180308 ACCCTAGAAGCTAGCCTATGGT 59.820 50.000 12.13 15.16 31.76 3.55
3106 3264 2.896039 ACCCTAGAAGCTAGCCTATGG 58.104 52.381 12.13 14.55 0.00 2.74
3107 3265 4.965200 AAACCCTAGAAGCTAGCCTATG 57.035 45.455 12.13 3.90 0.00 2.23
3108 3266 4.528987 GCTAAACCCTAGAAGCTAGCCTAT 59.471 45.833 12.13 0.00 32.18 2.57
3109 3267 3.896272 GCTAAACCCTAGAAGCTAGCCTA 59.104 47.826 12.13 5.82 32.18 3.93
3110 3268 2.701423 GCTAAACCCTAGAAGCTAGCCT 59.299 50.000 12.13 4.79 32.18 4.58
3111 3269 2.224329 GGCTAAACCCTAGAAGCTAGCC 60.224 54.545 12.13 13.65 43.27 3.93
3112 3270 2.701423 AGGCTAAACCCTAGAAGCTAGC 59.299 50.000 6.62 6.62 40.58 3.42
3113 3271 3.322541 GGAGGCTAAACCCTAGAAGCTAG 59.677 52.174 0.00 0.00 40.58 3.42
3114 3272 3.052033 AGGAGGCTAAACCCTAGAAGCTA 60.052 47.826 0.00 0.00 40.58 3.32
3115 3273 2.120312 GGAGGCTAAACCCTAGAAGCT 58.880 52.381 0.00 0.00 40.58 3.74
3116 3274 2.120312 AGGAGGCTAAACCCTAGAAGC 58.880 52.381 0.00 0.00 40.58 3.86
3117 3275 3.775316 TCAAGGAGGCTAAACCCTAGAAG 59.225 47.826 0.00 0.00 40.58 2.85
3118 3276 3.798515 TCAAGGAGGCTAAACCCTAGAA 58.201 45.455 0.00 0.00 40.58 2.10
3119 3277 3.484953 TCAAGGAGGCTAAACCCTAGA 57.515 47.619 0.00 0.00 40.58 2.43
3120 3278 3.970640 AGATCAAGGAGGCTAAACCCTAG 59.029 47.826 0.00 0.00 40.58 3.02
3121 3279 3.967987 GAGATCAAGGAGGCTAAACCCTA 59.032 47.826 0.00 0.00 40.58 3.53
3122 3280 2.774809 GAGATCAAGGAGGCTAAACCCT 59.225 50.000 0.00 0.00 40.58 4.34
3123 3281 2.483889 CGAGATCAAGGAGGCTAAACCC 60.484 54.545 0.00 0.00 40.58 4.11
3124 3282 2.168728 ACGAGATCAAGGAGGCTAAACC 59.831 50.000 0.00 0.00 39.61 3.27
3125 3283 3.190874 CACGAGATCAAGGAGGCTAAAC 58.809 50.000 0.00 0.00 0.00 2.01
3126 3284 2.168521 CCACGAGATCAAGGAGGCTAAA 59.831 50.000 0.00 0.00 0.00 1.85
3127 3285 1.757118 CCACGAGATCAAGGAGGCTAA 59.243 52.381 0.00 0.00 0.00 3.09
3128 3286 1.342076 ACCACGAGATCAAGGAGGCTA 60.342 52.381 0.00 0.00 0.00 3.93
3129 3287 0.616111 ACCACGAGATCAAGGAGGCT 60.616 55.000 0.00 0.00 0.00 4.58
3130 3288 1.067821 CTACCACGAGATCAAGGAGGC 59.932 57.143 0.00 0.00 0.00 4.70
3131 3289 2.656002 TCTACCACGAGATCAAGGAGG 58.344 52.381 0.00 0.00 0.00 4.30
3145 3303 7.647325 TGTGTGTTACAAGAGTGGATCTACCA 61.647 42.308 5.47 0.00 40.62 3.25
3146 3304 5.169295 GTGTGTTACAAGAGTGGATCTACC 58.831 45.833 5.47 0.00 37.23 3.18
3147 3305 5.779922 TGTGTGTTACAAGAGTGGATCTAC 58.220 41.667 0.00 0.00 37.23 2.59
3148 3306 6.210584 TGATGTGTGTTACAAGAGTGGATCTA 59.789 38.462 0.00 0.00 43.77 1.98
3149 3307 4.955811 TGTGTGTTACAAGAGTGGATCT 57.044 40.909 0.00 0.00 41.27 2.75
3150 3308 5.237815 TGATGTGTGTTACAAGAGTGGATC 58.762 41.667 0.00 0.00 43.77 3.36
3151 3309 5.227569 TGATGTGTGTTACAAGAGTGGAT 57.772 39.130 0.00 0.00 43.77 3.41
3152 3310 4.681074 TGATGTGTGTTACAAGAGTGGA 57.319 40.909 0.00 0.00 43.77 4.02
3153 3311 4.996758 TGATGATGTGTGTTACAAGAGTGG 59.003 41.667 0.00 0.00 43.77 4.00
3154 3312 6.544038 TTGATGATGTGTGTTACAAGAGTG 57.456 37.500 0.00 0.00 43.77 3.51
3155 3313 9.453572 AATATTGATGATGTGTGTTACAAGAGT 57.546 29.630 0.00 0.00 43.77 3.24
3163 3321 9.740239 GCTTGATTAATATTGATGATGTGTGTT 57.260 29.630 0.00 0.00 0.00 3.32
3164 3322 8.905850 TGCTTGATTAATATTGATGATGTGTGT 58.094 29.630 0.00 0.00 0.00 3.72
3165 3323 9.394477 CTGCTTGATTAATATTGATGATGTGTG 57.606 33.333 0.00 0.00 0.00 3.82
3166 3324 8.573885 CCTGCTTGATTAATATTGATGATGTGT 58.426 33.333 0.00 0.00 0.00 3.72
3167 3325 8.789762 TCCTGCTTGATTAATATTGATGATGTG 58.210 33.333 0.00 0.00 0.00 3.21
3168 3326 8.790718 GTCCTGCTTGATTAATATTGATGATGT 58.209 33.333 0.00 0.00 0.00 3.06
3169 3327 7.961283 CGTCCTGCTTGATTAATATTGATGATG 59.039 37.037 0.00 0.00 0.00 3.07
3170 3328 7.663081 ACGTCCTGCTTGATTAATATTGATGAT 59.337 33.333 0.00 0.00 0.00 2.45
3171 3329 6.992123 ACGTCCTGCTTGATTAATATTGATGA 59.008 34.615 0.00 0.00 0.00 2.92
3172 3330 7.073883 CACGTCCTGCTTGATTAATATTGATG 58.926 38.462 0.00 0.00 0.00 3.07
3173 3331 6.205464 CCACGTCCTGCTTGATTAATATTGAT 59.795 38.462 0.00 0.00 0.00 2.57
3174 3332 5.527214 CCACGTCCTGCTTGATTAATATTGA 59.473 40.000 0.00 0.00 0.00 2.57
3175 3333 5.277974 CCCACGTCCTGCTTGATTAATATTG 60.278 44.000 0.00 0.00 0.00 1.90
3176 3334 4.821805 CCCACGTCCTGCTTGATTAATATT 59.178 41.667 0.00 0.00 0.00 1.28
3177 3335 4.389374 CCCACGTCCTGCTTGATTAATAT 58.611 43.478 0.00 0.00 0.00 1.28
3178 3336 3.433031 CCCCACGTCCTGCTTGATTAATA 60.433 47.826 0.00 0.00 0.00 0.98
3179 3337 2.643551 CCCACGTCCTGCTTGATTAAT 58.356 47.619 0.00 0.00 0.00 1.40
3180 3338 1.339631 CCCCACGTCCTGCTTGATTAA 60.340 52.381 0.00 0.00 0.00 1.40
3181 3339 0.251916 CCCCACGTCCTGCTTGATTA 59.748 55.000 0.00 0.00 0.00 1.75
3182 3340 1.002134 CCCCACGTCCTGCTTGATT 60.002 57.895 0.00 0.00 0.00 2.57
3183 3341 1.779061 AACCCCACGTCCTGCTTGAT 61.779 55.000 0.00 0.00 0.00 2.57
3184 3342 1.990160 AAACCCCACGTCCTGCTTGA 61.990 55.000 0.00 0.00 0.00 3.02
3185 3343 1.106944 AAAACCCCACGTCCTGCTTG 61.107 55.000 0.00 0.00 0.00 4.01
3186 3344 0.475044 TAAAACCCCACGTCCTGCTT 59.525 50.000 0.00 0.00 0.00 3.91
3187 3345 0.250597 GTAAAACCCCACGTCCTGCT 60.251 55.000 0.00 0.00 0.00 4.24
3188 3346 1.239296 GGTAAAACCCCACGTCCTGC 61.239 60.000 0.00 0.00 30.04 4.85
3189 3347 0.399075 AGGTAAAACCCCACGTCCTG 59.601 55.000 0.00 0.00 39.75 3.86
3190 3348 0.689055 GAGGTAAAACCCCACGTCCT 59.311 55.000 0.00 0.00 39.75 3.85
3191 3349 0.321919 GGAGGTAAAACCCCACGTCC 60.322 60.000 0.00 0.00 39.75 4.79
3192 3350 0.397564 TGGAGGTAAAACCCCACGTC 59.602 55.000 0.00 0.00 39.75 4.34
3193 3351 1.003928 GATGGAGGTAAAACCCCACGT 59.996 52.381 8.03 0.00 40.02 4.49
3194 3352 1.003812 TGATGGAGGTAAAACCCCACG 59.996 52.381 8.03 0.00 40.02 4.94
3195 3353 2.891191 TGATGGAGGTAAAACCCCAC 57.109 50.000 8.03 4.78 40.02 4.61
3196 3354 2.990284 TCTTGATGGAGGTAAAACCCCA 59.010 45.455 8.23 8.23 40.96 4.96
3197 3355 3.621558 CTCTTGATGGAGGTAAAACCCC 58.378 50.000 0.00 0.00 39.75 4.95
3198 3356 3.621558 CCTCTTGATGGAGGTAAAACCC 58.378 50.000 2.65 0.00 45.65 4.11
3207 3365 1.626356 TTCGGGCCCTCTTGATGGAG 61.626 60.000 22.43 0.00 0.00 3.86
3208 3366 1.615124 TTCGGGCCCTCTTGATGGA 60.615 57.895 22.43 3.53 0.00 3.41
3209 3367 1.452108 GTTCGGGCCCTCTTGATGG 60.452 63.158 22.43 0.54 0.00 3.51
3210 3368 1.452108 GGTTCGGGCCCTCTTGATG 60.452 63.158 22.43 1.43 0.00 3.07
3211 3369 1.616628 AGGTTCGGGCCCTCTTGAT 60.617 57.895 22.43 0.00 0.00 2.57
3212 3370 2.203938 AGGTTCGGGCCCTCTTGA 60.204 61.111 22.43 6.61 0.00 3.02
3213 3371 2.045926 CAGGTTCGGGCCCTCTTG 60.046 66.667 22.43 12.77 0.00 3.02
3214 3372 3.330720 CCAGGTTCGGGCCCTCTT 61.331 66.667 22.43 3.59 0.00 2.85
3222 3380 1.735571 CGATGTTTTACCCAGGTTCGG 59.264 52.381 0.00 0.00 0.00 4.30
3223 3381 2.158841 CACGATGTTTTACCCAGGTTCG 59.841 50.000 0.00 0.00 0.00 3.95
3224 3382 3.143728 ACACGATGTTTTACCCAGGTTC 58.856 45.455 0.00 0.00 0.00 3.62
3225 3383 3.143728 GACACGATGTTTTACCCAGGTT 58.856 45.455 0.00 0.00 0.00 3.50
3226 3384 2.551504 GGACACGATGTTTTACCCAGGT 60.552 50.000 0.00 0.00 0.00 4.00
3227 3385 2.081462 GGACACGATGTTTTACCCAGG 58.919 52.381 0.00 0.00 0.00 4.45
3228 3386 2.081462 GGGACACGATGTTTTACCCAG 58.919 52.381 0.00 0.00 32.58 4.45
3229 3387 1.700739 AGGGACACGATGTTTTACCCA 59.299 47.619 0.00 0.00 34.20 4.51
3230 3388 2.353323 GAGGGACACGATGTTTTACCC 58.647 52.381 0.00 0.00 32.49 3.69
3242 3400 1.201880 GTAACAGGAGACGAGGGACAC 59.798 57.143 0.00 0.00 0.00 3.67
3243 3401 1.542492 GTAACAGGAGACGAGGGACA 58.458 55.000 0.00 0.00 0.00 4.02
3244 3402 0.816373 GGTAACAGGAGACGAGGGAC 59.184 60.000 0.00 0.00 0.00 4.46
3245 3403 0.406750 TGGTAACAGGAGACGAGGGA 59.593 55.000 0.00 0.00 46.17 4.20
3246 3404 2.971676 TGGTAACAGGAGACGAGGG 58.028 57.895 0.00 0.00 46.17 4.30
3258 3416 0.596859 GCGTCTAGGCGGATGGTAAC 60.597 60.000 19.86 0.00 0.00 2.50
3259 3417 1.737816 GCGTCTAGGCGGATGGTAA 59.262 57.895 19.86 0.00 0.00 2.85
3260 3418 3.440151 GCGTCTAGGCGGATGGTA 58.560 61.111 19.86 0.00 0.00 3.25


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.