Multiple sequence alignment - TraesCS3B01G150200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G150200 chr3B 100.000 3180 0 0 1 3180 141287862 141291041 0.000000e+00 5873.0
1 TraesCS3B01G150200 chr3B 91.454 1568 79 20 790 2330 141735108 141736647 0.000000e+00 2102.0
2 TraesCS3B01G150200 chr3B 89.608 1020 92 5 1065 2084 141740125 141741130 0.000000e+00 1284.0
3 TraesCS3B01G150200 chr3B 85.614 285 31 9 192 470 141732823 141733103 1.120000e-74 291.0
4 TraesCS3B01G150200 chr3B 84.000 75 5 3 11 78 737365613 737365539 7.360000e-07 65.8
5 TraesCS3B01G150200 chr3D 93.678 1566 68 13 792 2330 91707789 91709350 0.000000e+00 2314.0
6 TraesCS3B01G150200 chr3D 90.335 807 70 2 1278 2084 91797727 91798525 0.000000e+00 1051.0
7 TraesCS3B01G150200 chr3D 84.249 965 148 4 1083 2045 91682998 91682036 0.000000e+00 937.0
8 TraesCS3B01G150200 chr3D 87.193 367 41 3 1056 1422 91690874 91691234 2.280000e-111 412.0
9 TraesCS3B01G150200 chr3D 86.913 298 39 0 1748 2045 91703505 91703802 5.080000e-88 335.0
10 TraesCS3B01G150200 chr3D 85.507 276 27 8 393 668 91707267 91707529 3.120000e-70 276.0
11 TraesCS3B01G150200 chr3D 83.523 176 19 3 214 389 91705757 91705922 4.250000e-34 156.0
12 TraesCS3B01G150200 chr3D 94.340 53 3 0 103 155 312157460 312157408 7.310000e-12 82.4
13 TraesCS3B01G150200 chr3D 95.918 49 2 0 103 151 515677218 515677266 2.630000e-11 80.5
14 TraesCS3B01G150200 chr3D 95.122 41 2 0 111 151 48041309 48041269 7.360000e-07 65.8
15 TraesCS3B01G150200 chr3D 80.645 93 10 1 67 151 591722983 591723075 7.360000e-07 65.8
16 TraesCS3B01G150200 chr3A 92.358 1544 75 15 804 2330 545281070 545282587 0.000000e+00 2158.0
17 TraesCS3B01G150200 chr3A 90.695 1021 81 5 1064 2084 545331368 545332374 0.000000e+00 1347.0
18 TraesCS3B01G150200 chr3A 86.497 985 126 3 1062 2045 545257491 545258469 0.000000e+00 1075.0
19 TraesCS3B01G150200 chr3A 84.145 965 149 4 1083 2045 107757070 107756108 0.000000e+00 931.0
20 TraesCS3B01G150200 chr3A 83.230 161 17 3 2500 2650 450572097 450572257 4.280000e-29 139.0
21 TraesCS3B01G150200 chr3A 92.857 70 4 1 814 882 545254246 545254315 2.020000e-17 100.0
22 TraesCS3B01G150200 chr3A 80.247 81 9 2 3 76 691061469 691061389 2.000000e-03 54.7
23 TraesCS3B01G150200 chr2D 95.437 526 18 1 2661 3180 613482478 613483003 0.000000e+00 833.0
24 TraesCS3B01G150200 chr2D 84.967 153 14 2 2506 2649 274937862 274937710 2.560000e-31 147.0
25 TraesCS3B01G150200 chr2D 91.089 101 9 0 2549 2649 264338928 264338828 1.540000e-28 137.0
26 TraesCS3B01G150200 chr2D 92.391 92 7 0 2549 2640 195188933 195189024 7.160000e-27 132.0
27 TraesCS3B01G150200 chr2D 95.122 41 2 0 3 43 452373758 452373798 7.360000e-07 65.8
28 TraesCS3B01G150200 chr2D 95.000 40 2 0 3 42 648631384 648631345 2.650000e-06 63.9
29 TraesCS3B01G150200 chr2D 92.500 40 2 1 43 81 73123608 73123569 4.430000e-04 56.5
30 TraesCS3B01G150200 chr6D 95.247 526 19 2 2661 3180 408338962 408339487 0.000000e+00 828.0
31 TraesCS3B01G150200 chr6D 83.750 160 16 2 2500 2649 164870783 164870942 3.310000e-30 143.0
32 TraesCS3B01G150200 chr6D 83.784 148 14 2 2503 2640 174272509 174272656 7.160000e-27 132.0
33 TraesCS3B01G150200 chr1B 94.757 534 21 2 2654 3180 239949066 239948533 0.000000e+00 824.0
34 TraesCS3B01G150200 chr1B 81.928 83 8 1 3 78 669905262 669905344 2.650000e-06 63.9
35 TraesCS3B01G150200 chr1B 97.222 36 1 0 43 78 332270820 332270785 9.520000e-06 62.1
36 TraesCS3B01G150200 chr6B 95.010 521 26 0 2660 3180 234392210 234391690 0.000000e+00 819.0
37 TraesCS3B01G150200 chr6B 95.029 523 23 2 2661 3180 316778085 316778607 0.000000e+00 819.0
38 TraesCS3B01G150200 chr6B 95.000 520 26 0 2661 3180 233561344 233561863 0.000000e+00 817.0
39 TraesCS3B01G150200 chr4B 95.000 520 22 3 2663 3180 300752818 300753335 0.000000e+00 813.0
40 TraesCS3B01G150200 chr7B 94.808 520 27 0 2661 3180 432681093 432680574 0.000000e+00 811.0
41 TraesCS3B01G150200 chr7B 94.667 525 22 1 2662 3180 421095050 421095574 0.000000e+00 809.0
42 TraesCS3B01G150200 chr7B 100.000 28 0 0 15 42 731967285 731967312 6.000000e-03 52.8
43 TraesCS3B01G150200 chr7B 100.000 28 0 0 15 42 732093008 732093035 6.000000e-03 52.8
44 TraesCS3B01G150200 chr4D 90.351 114 9 2 2549 2661 2876253 2876365 7.110000e-32 148.0
45 TraesCS3B01G150200 chr5A 84.667 150 18 3 2508 2656 180360876 180360731 9.190000e-31 145.0
46 TraesCS3B01G150200 chr5A 91.579 95 8 0 2555 2649 432415206 432415112 7.160000e-27 132.0
47 TraesCS3B01G150200 chr5A 85.542 83 4 1 77 151 538319263 538319345 2.630000e-11 80.5
48 TraesCS3B01G150200 chr5A 87.037 54 3 3 193 243 322856513 322856565 1.230000e-04 58.4
49 TraesCS3B01G150200 chr2A 94.444 54 3 0 106 159 572446301 572446248 2.030000e-12 84.2
50 TraesCS3B01G150200 chr2A 88.889 54 6 0 189 242 710100796 710100743 2.050000e-07 67.6
51 TraesCS3B01G150200 chr2B 90.196 51 5 0 105 155 632619059 632619009 2.050000e-07 67.6
52 TraesCS3B01G150200 chr2B 97.436 39 1 0 112 150 790688497 790688459 2.050000e-07 67.6
53 TraesCS3B01G150200 chr2B 93.182 44 3 0 103 146 608669451 608669408 7.360000e-07 65.8
54 TraesCS3B01G150200 chr2B 94.872 39 2 0 4 42 26990311 26990349 9.520000e-06 62.1
55 TraesCS3B01G150200 chr5D 84.000 75 5 1 11 78 397023277 397023203 7.360000e-07 65.8
56 TraesCS3B01G150200 chr7D 83.117 77 6 3 3 72 555629172 555629248 2.650000e-06 63.9
57 TraesCS3B01G150200 chr7D 94.444 36 2 0 43 78 588839435 588839400 4.430000e-04 56.5
58 TraesCS3B01G150200 chr1A 92.500 40 3 0 3 42 2398998 2399037 1.230000e-04 58.4
59 TraesCS3B01G150200 chr5B 100.000 30 0 0 43 72 91107621 91107650 4.430000e-04 56.5
60 TraesCS3B01G150200 chrUn 100.000 28 0 0 15 42 160389313 160389340 6.000000e-03 52.8
61 TraesCS3B01G150200 chrUn 100.000 28 0 0 15 42 292559189 292559216 6.000000e-03 52.8
62 TraesCS3B01G150200 chrUn 100.000 28 0 0 15 42 383583322 383583349 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G150200 chr3B 141287862 141291041 3179 False 5873.000000 5873 100.00000 1 3180 1 chr3B.!!$F1 3179
1 TraesCS3B01G150200 chr3B 141732823 141741130 8307 False 1225.666667 2102 88.89200 192 2330 3 chr3B.!!$F2 2138
2 TraesCS3B01G150200 chr3D 91797727 91798525 798 False 1051.000000 1051 90.33500 1278 2084 1 chr3D.!!$F2 806
3 TraesCS3B01G150200 chr3D 91682036 91682998 962 True 937.000000 937 84.24900 1083 2045 1 chr3D.!!$R2 962
4 TraesCS3B01G150200 chr3D 91703505 91709350 5845 False 770.250000 2314 87.40525 214 2330 4 chr3D.!!$F5 2116
5 TraesCS3B01G150200 chr3A 545281070 545282587 1517 False 2158.000000 2158 92.35800 804 2330 1 chr3A.!!$F2 1526
6 TraesCS3B01G150200 chr3A 545331368 545332374 1006 False 1347.000000 1347 90.69500 1064 2084 1 chr3A.!!$F3 1020
7 TraesCS3B01G150200 chr3A 107756108 107757070 962 True 931.000000 931 84.14500 1083 2045 1 chr3A.!!$R1 962
8 TraesCS3B01G150200 chr3A 545254246 545258469 4223 False 587.500000 1075 89.67700 814 2045 2 chr3A.!!$F4 1231
9 TraesCS3B01G150200 chr2D 613482478 613483003 525 False 833.000000 833 95.43700 2661 3180 1 chr2D.!!$F3 519
10 TraesCS3B01G150200 chr6D 408338962 408339487 525 False 828.000000 828 95.24700 2661 3180 1 chr6D.!!$F3 519
11 TraesCS3B01G150200 chr1B 239948533 239949066 533 True 824.000000 824 94.75700 2654 3180 1 chr1B.!!$R1 526
12 TraesCS3B01G150200 chr6B 234391690 234392210 520 True 819.000000 819 95.01000 2660 3180 1 chr6B.!!$R1 520
13 TraesCS3B01G150200 chr6B 316778085 316778607 522 False 819.000000 819 95.02900 2661 3180 1 chr6B.!!$F2 519
14 TraesCS3B01G150200 chr6B 233561344 233561863 519 False 817.000000 817 95.00000 2661 3180 1 chr6B.!!$F1 519
15 TraesCS3B01G150200 chr4B 300752818 300753335 517 False 813.000000 813 95.00000 2663 3180 1 chr4B.!!$F1 517
16 TraesCS3B01G150200 chr7B 432680574 432681093 519 True 811.000000 811 94.80800 2661 3180 1 chr7B.!!$R1 519
17 TraesCS3B01G150200 chr7B 421095050 421095574 524 False 809.000000 809 94.66700 2662 3180 1 chr7B.!!$F1 518

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
957 6063 0.034337 GTGGTGCACGGGAAGAAGTA 59.966 55.0 11.45 0.0 0.0 2.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2600 10721 0.039618 GTCCTTGAGGGCCATGGAAA 59.96 55.0 18.4 0.0 46.67 3.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.483954 CCGACAATCTGCATCCCTT 57.516 52.632 0.00 0.00 0.00 3.95
19 20 1.303309 CCGACAATCTGCATCCCTTC 58.697 55.000 0.00 0.00 0.00 3.46
20 21 1.407299 CCGACAATCTGCATCCCTTCA 60.407 52.381 0.00 0.00 0.00 3.02
21 22 2.569059 CGACAATCTGCATCCCTTCAT 58.431 47.619 0.00 0.00 0.00 2.57
23 24 3.548770 GACAATCTGCATCCCTTCATCA 58.451 45.455 0.00 0.00 0.00 3.07
24 25 3.949754 GACAATCTGCATCCCTTCATCAA 59.050 43.478 0.00 0.00 0.00 2.57
25 26 4.543689 ACAATCTGCATCCCTTCATCAAT 58.456 39.130 0.00 0.00 0.00 2.57
26 27 4.960469 ACAATCTGCATCCCTTCATCAATT 59.040 37.500 0.00 0.00 0.00 2.32
27 28 5.424252 ACAATCTGCATCCCTTCATCAATTT 59.576 36.000 0.00 0.00 0.00 1.82
29 30 4.602107 TCTGCATCCCTTCATCAATTTGA 58.398 39.130 0.75 0.75 0.00 2.69
30 31 5.205821 TCTGCATCCCTTCATCAATTTGAT 58.794 37.500 6.06 6.06 37.65 2.57
31 32 6.367161 TCTGCATCCCTTCATCAATTTGATA 58.633 36.000 11.44 0.00 34.28 2.15
34 35 5.771666 GCATCCCTTCATCAATTTGATAGGA 59.228 40.000 22.04 18.87 34.28 2.94
35 36 6.072064 GCATCCCTTCATCAATTTGATAGGAG 60.072 42.308 22.04 15.23 34.28 3.69
36 37 6.581388 TCCCTTCATCAATTTGATAGGAGT 57.419 37.500 22.04 0.00 34.28 3.85
40 41 6.146837 CCTTCATCAATTTGATAGGAGTAGCG 59.853 42.308 17.91 2.88 34.28 4.26
41 42 6.405278 TCATCAATTTGATAGGAGTAGCGA 57.595 37.500 11.44 0.00 34.28 4.93
42 43 6.997655 TCATCAATTTGATAGGAGTAGCGAT 58.002 36.000 11.44 0.00 34.28 4.58
44 45 4.991056 TCAATTTGATAGGAGTAGCGATGC 59.009 41.667 0.00 0.00 0.00 3.91
46 47 1.995376 TGATAGGAGTAGCGATGCCA 58.005 50.000 0.00 0.00 0.00 4.92
48 49 2.297315 TGATAGGAGTAGCGATGCCAAG 59.703 50.000 0.00 0.00 0.00 3.61
49 50 2.067365 TAGGAGTAGCGATGCCAAGA 57.933 50.000 0.00 0.00 0.00 3.02
50 51 1.418334 AGGAGTAGCGATGCCAAGAT 58.582 50.000 0.00 0.00 0.00 2.40
52 53 1.069204 GGAGTAGCGATGCCAAGATGA 59.931 52.381 0.00 0.00 0.00 2.92
66 67 4.774124 CCAAGATGATGGCTTCAGACTTA 58.226 43.478 17.95 0.00 37.89 2.24
67 68 4.574013 CCAAGATGATGGCTTCAGACTTAC 59.426 45.833 17.95 4.80 37.89 2.34
68 69 5.426504 CAAGATGATGGCTTCAGACTTACT 58.573 41.667 17.95 6.37 37.89 2.24
69 70 5.021033 AGATGATGGCTTCAGACTTACTG 57.979 43.478 9.09 0.00 46.97 2.74
70 71 9.677493 CCAAGATGATGGCTTCAGACTTACTGA 62.677 44.444 17.95 0.00 42.49 3.41
86 87 8.368668 AGACTTACTGATTTATTATTCCCTCCG 58.631 37.037 0.00 0.00 0.00 4.63
88 89 4.652822 ACTGATTTATTATTCCCTCCGCC 58.347 43.478 0.00 0.00 0.00 6.13
90 91 2.963599 TTTATTATTCCCTCCGCCCC 57.036 50.000 0.00 0.00 0.00 5.80
91 92 1.822425 TTATTATTCCCTCCGCCCCA 58.178 50.000 0.00 0.00 0.00 4.96
92 93 2.053747 TATTATTCCCTCCGCCCCAT 57.946 50.000 0.00 0.00 0.00 4.00
93 94 2.053747 ATTATTCCCTCCGCCCCATA 57.946 50.000 0.00 0.00 0.00 2.74
94 95 1.822425 TTATTCCCTCCGCCCCATAA 58.178 50.000 0.00 0.00 0.00 1.90
96 97 2.053747 ATTCCCTCCGCCCCATAATA 57.946 50.000 0.00 0.00 0.00 0.98
97 98 2.053747 TTCCCTCCGCCCCATAATAT 57.946 50.000 0.00 0.00 0.00 1.28
99 100 3.208570 TCCCTCCGCCCCATAATATAA 57.791 47.619 0.00 0.00 0.00 0.98
100 101 3.112263 TCCCTCCGCCCCATAATATAAG 58.888 50.000 0.00 0.00 0.00 1.73
101 102 3.112263 CCCTCCGCCCCATAATATAAGA 58.888 50.000 0.00 0.00 0.00 2.10
102 103 3.134804 CCCTCCGCCCCATAATATAAGAG 59.865 52.174 0.00 0.00 0.00 2.85
103 104 4.030913 CCTCCGCCCCATAATATAAGAGA 58.969 47.826 0.00 0.00 0.00 3.10
105 106 4.422057 TCCGCCCCATAATATAAGAGACA 58.578 43.478 0.00 0.00 0.00 3.41
107 108 4.223032 CCGCCCCATAATATAAGAGACACT 59.777 45.833 0.00 0.00 0.00 3.55
108 109 5.421056 CCGCCCCATAATATAAGAGACACTA 59.579 44.000 0.00 0.00 0.00 2.74
109 110 6.331061 CGCCCCATAATATAAGAGACACTAC 58.669 44.000 0.00 0.00 0.00 2.73
110 111 6.071560 CGCCCCATAATATAAGAGACACTACA 60.072 42.308 0.00 0.00 0.00 2.74
111 112 7.097834 GCCCCATAATATAAGAGACACTACAC 58.902 42.308 0.00 0.00 0.00 2.90
112 113 7.038941 GCCCCATAATATAAGAGACACTACACT 60.039 40.741 0.00 0.00 0.00 3.55
113 114 9.529823 CCCCATAATATAAGAGACACTACACTA 57.470 37.037 0.00 0.00 0.00 2.74
144 145 4.966965 ACGCTCCTATATTATGAGACGG 57.033 45.455 0.00 0.00 33.26 4.79
145 146 4.586884 ACGCTCCTATATTATGAGACGGA 58.413 43.478 0.00 0.00 33.26 4.69
146 147 4.636648 ACGCTCCTATATTATGAGACGGAG 59.363 45.833 0.00 0.00 39.55 4.63
147 148 4.035792 CGCTCCTATATTATGAGACGGAGG 59.964 50.000 0.00 0.00 37.59 4.30
148 149 4.339814 GCTCCTATATTATGAGACGGAGGG 59.660 50.000 0.00 0.00 37.59 4.30
149 150 5.756918 CTCCTATATTATGAGACGGAGGGA 58.243 45.833 0.00 0.00 34.40 4.20
150 151 5.756918 TCCTATATTATGAGACGGAGGGAG 58.243 45.833 0.00 0.00 0.00 4.30
151 152 4.339814 CCTATATTATGAGACGGAGGGAGC 59.660 50.000 0.00 0.00 0.00 4.70
152 153 2.088104 ATTATGAGACGGAGGGAGCA 57.912 50.000 0.00 0.00 0.00 4.26
153 154 2.088104 TTATGAGACGGAGGGAGCAT 57.912 50.000 0.00 0.00 0.00 3.79
154 155 2.088104 TATGAGACGGAGGGAGCATT 57.912 50.000 0.00 0.00 0.00 3.56
156 157 0.984230 TGAGACGGAGGGAGCATTTT 59.016 50.000 0.00 0.00 0.00 1.82
158 159 0.693049 AGACGGAGGGAGCATTTTGT 59.307 50.000 0.00 0.00 0.00 2.83
159 160 1.906574 AGACGGAGGGAGCATTTTGTA 59.093 47.619 0.00 0.00 0.00 2.41
160 161 2.304761 AGACGGAGGGAGCATTTTGTAA 59.695 45.455 0.00 0.00 0.00 2.41
161 162 3.054361 AGACGGAGGGAGCATTTTGTAAT 60.054 43.478 0.00 0.00 0.00 1.89
162 163 3.016736 ACGGAGGGAGCATTTTGTAATG 58.983 45.455 0.00 0.00 43.28 1.90
176 177 7.571892 CATTTTGTAATGCCTTGGTAAACAAC 58.428 34.615 7.95 0.00 35.15 3.32
177 178 6.472686 TTTGTAATGCCTTGGTAAACAACT 57.527 33.333 7.95 0.00 34.76 3.16
178 179 5.699097 TGTAATGCCTTGGTAAACAACTC 57.301 39.130 0.00 0.00 34.76 3.01
180 181 5.594725 TGTAATGCCTTGGTAAACAACTCAA 59.405 36.000 0.00 0.00 34.76 3.02
182 183 5.606348 ATGCCTTGGTAAACAACTCAAAA 57.394 34.783 0.00 0.00 34.76 2.44
183 184 5.606348 TGCCTTGGTAAACAACTCAAAAT 57.394 34.783 0.00 0.00 34.76 1.82
184 185 6.716934 TGCCTTGGTAAACAACTCAAAATA 57.283 33.333 0.00 0.00 34.76 1.40
185 186 7.296628 TGCCTTGGTAAACAACTCAAAATAT 57.703 32.000 0.00 0.00 34.76 1.28
186 187 8.410673 TGCCTTGGTAAACAACTCAAAATATA 57.589 30.769 0.00 0.00 34.76 0.86
187 188 8.519526 TGCCTTGGTAAACAACTCAAAATATAG 58.480 33.333 0.00 0.00 34.76 1.31
188 189 8.520351 GCCTTGGTAAACAACTCAAAATATAGT 58.480 33.333 0.00 0.00 34.76 2.12
197 198 7.213252 CAACTCAAAATATAGTTGCATGCAC 57.787 36.000 22.58 15.59 44.23 4.57
202 203 2.979814 TATAGTTGCATGCACCGTCT 57.020 45.000 22.58 17.65 0.00 4.18
204 205 2.753055 TAGTTGCATGCACCGTCTTA 57.247 45.000 22.58 0.00 0.00 2.10
214 215 1.732405 GCACCGTCTTAATGCAAAGGC 60.732 52.381 0.00 0.00 39.23 4.35
233 2273 1.209621 CCGGGGGTCATCCTTCTTTA 58.790 55.000 0.00 0.00 35.33 1.85
234 2274 1.774856 CCGGGGGTCATCCTTCTTTAT 59.225 52.381 0.00 0.00 35.33 1.40
235 2275 2.976882 CCGGGGGTCATCCTTCTTTATA 59.023 50.000 0.00 0.00 35.33 0.98
326 2372 0.378962 CAACCGAGACACGCCAAAAA 59.621 50.000 0.00 0.00 41.07 1.94
333 2379 4.472286 CGAGACACGCCAAAAACATAATT 58.528 39.130 0.00 0.00 34.51 1.40
370 2416 1.859427 ATCACCGCAGCTGCACAAAG 61.859 55.000 36.03 20.19 42.21 2.77
371 2417 2.203195 ACCGCAGCTGCACAAAGA 60.203 55.556 36.03 0.00 42.21 2.52
466 3853 3.228188 TGAGCAATCTTGGGAAGTTGT 57.772 42.857 0.00 0.00 0.00 3.32
472 3859 4.458989 GCAATCTTGGGAAGTTGTGATACA 59.541 41.667 0.00 0.00 0.00 2.29
473 3860 5.619981 GCAATCTTGGGAAGTTGTGATACAC 60.620 44.000 0.00 0.00 34.56 2.90
474 3861 4.698201 TCTTGGGAAGTTGTGATACACA 57.302 40.909 0.25 0.25 43.02 3.72
515 5216 4.683643 TCTTGGGAAATTTTTAGGGGAGG 58.316 43.478 0.00 0.00 0.00 4.30
518 5219 2.316677 GGGAAATTTTTAGGGGAGGGGA 59.683 50.000 0.00 0.00 0.00 4.81
519 5220 3.051341 GGGAAATTTTTAGGGGAGGGGAT 60.051 47.826 0.00 0.00 0.00 3.85
520 5221 3.967326 GGAAATTTTTAGGGGAGGGGATG 59.033 47.826 0.00 0.00 0.00 3.51
521 5222 3.706389 AATTTTTAGGGGAGGGGATGG 57.294 47.619 0.00 0.00 0.00 3.51
522 5223 1.314895 TTTTTAGGGGAGGGGATGGG 58.685 55.000 0.00 0.00 0.00 4.00
523 5224 0.428102 TTTTAGGGGAGGGGATGGGA 59.572 55.000 0.00 0.00 0.00 4.37
524 5225 0.659133 TTTAGGGGAGGGGATGGGAT 59.341 55.000 0.00 0.00 0.00 3.85
538 5239 0.046242 TGGGATGGGTGGGAGAGAAT 59.954 55.000 0.00 0.00 0.00 2.40
575 5277 8.167345 GGTTACGTTAGAATTTTGTAGCTTCTC 58.833 37.037 0.00 0.00 31.89 2.87
606 5308 6.820152 GTGTAGGATTATCGGTACCAAAACTT 59.180 38.462 13.54 1.24 0.00 2.66
625 5327 6.481954 AACTTAAGAGCAAATACGAACCAG 57.518 37.500 10.09 0.00 0.00 4.00
647 5349 3.701040 GCATGTGGTTCAATGGTTAGGAT 59.299 43.478 0.00 0.00 0.00 3.24
649 5351 3.696045 TGTGGTTCAATGGTTAGGATGG 58.304 45.455 0.00 0.00 0.00 3.51
658 5360 2.120312 TGGTTAGGATGGCGATGGTAA 58.880 47.619 0.00 0.00 0.00 2.85
668 5370 2.675242 CGATGGTAACCCCTGCCCA 61.675 63.158 0.00 0.00 0.00 5.36
698 5462 0.532640 AGTGATGTGCGTTCAGTGCA 60.533 50.000 0.00 0.00 40.70 4.57
699 5463 0.110509 GTGATGTGCGTTCAGTGCAG 60.111 55.000 0.00 0.00 44.21 4.41
701 5465 1.227943 ATGTGCGTTCAGTGCAGGT 60.228 52.632 0.00 0.00 44.21 4.00
713 5477 1.204941 AGTGCAGGTAGACGTTCCATC 59.795 52.381 0.00 0.00 0.00 3.51
719 5483 3.564644 CAGGTAGACGTTCCATCGACTAT 59.435 47.826 0.00 0.00 39.27 2.12
723 5487 4.713824 AGACGTTCCATCGACTATGAAA 57.286 40.909 0.00 0.00 37.86 2.69
727 5491 5.475719 ACGTTCCATCGACTATGAAAAAGA 58.524 37.500 0.00 0.00 37.86 2.52
741 5604 5.223449 TGAAAAAGACGTAGGGATGAGTT 57.777 39.130 0.00 0.00 0.00 3.01
745 5608 8.533657 TGAAAAAGACGTAGGGATGAGTTTATA 58.466 33.333 0.00 0.00 0.00 0.98
747 5610 8.888579 AAAAGACGTAGGGATGAGTTTATATG 57.111 34.615 0.00 0.00 0.00 1.78
749 5612 5.775701 AGACGTAGGGATGAGTTTATATGCT 59.224 40.000 0.00 0.00 0.00 3.79
754 5617 8.035394 CGTAGGGATGAGTTTATATGCTTATGT 58.965 37.037 2.46 0.00 0.00 2.29
758 5621 9.890629 GGGATGAGTTTATATGCTTATGTATCA 57.109 33.333 2.46 2.82 0.00 2.15
767 5630 9.788960 TTATATGCTTATGTATCATCGTGAGTC 57.211 33.333 2.46 0.00 0.00 3.36
768 5631 5.774498 TGCTTATGTATCATCGTGAGTCT 57.226 39.130 0.00 0.00 0.00 3.24
769 5632 5.523369 TGCTTATGTATCATCGTGAGTCTG 58.477 41.667 0.00 0.00 0.00 3.51
771 5634 6.262273 TGCTTATGTATCATCGTGAGTCTGTA 59.738 38.462 0.00 0.00 0.00 2.74
772 5635 6.579292 GCTTATGTATCATCGTGAGTCTGTAC 59.421 42.308 0.00 0.00 0.00 2.90
773 5636 7.520776 GCTTATGTATCATCGTGAGTCTGTACT 60.521 40.741 0.00 0.00 39.21 2.73
775 5638 4.941873 TGTATCATCGTGAGTCTGTACTGT 59.058 41.667 0.00 0.00 35.56 3.55
776 5639 3.831715 TCATCGTGAGTCTGTACTGTG 57.168 47.619 0.00 0.00 35.56 3.66
777 5640 3.146847 TCATCGTGAGTCTGTACTGTGT 58.853 45.455 0.00 0.00 35.56 3.72
778 5641 3.568430 TCATCGTGAGTCTGTACTGTGTT 59.432 43.478 0.00 0.00 35.56 3.32
780 5643 4.744136 TCGTGAGTCTGTACTGTGTTAG 57.256 45.455 0.00 0.00 35.56 2.34
784 5647 5.975344 CGTGAGTCTGTACTGTGTTAGAAAA 59.025 40.000 0.00 0.00 35.56 2.29
890 5981 0.951558 ACGGCATTGAAGTGTGGAAC 59.048 50.000 0.00 0.00 37.35 3.62
957 6063 0.034337 GTGGTGCACGGGAAGAAGTA 59.966 55.000 11.45 0.00 0.00 2.24
1346 9445 1.000486 TACTGCCTCGGCTCCTTCT 60.000 57.895 9.65 0.00 42.51 2.85
1998 10099 2.357034 TGTCCTTCAGCCGTTCGC 60.357 61.111 0.00 0.00 37.98 4.70
2048 10149 1.277495 CGGACGGTTCGTGTACCAAC 61.277 60.000 0.00 0.00 41.37 3.77
2079 10180 1.293963 GCTGAGCGCTGATGTGTTGA 61.294 55.000 18.48 0.00 35.14 3.18
2087 10188 2.793585 CGCTGATGTGTTGATGAATGGC 60.794 50.000 0.00 0.00 0.00 4.40
2099 10200 6.166279 GTTGATGAATGGCGATCTCCTAATA 58.834 40.000 2.88 0.00 0.00 0.98
2100 10201 6.358974 TGATGAATGGCGATCTCCTAATAA 57.641 37.500 2.88 0.00 0.00 1.40
2102 10203 6.820152 TGATGAATGGCGATCTCCTAATAATG 59.180 38.462 2.88 0.00 0.00 1.90
2105 10206 5.939764 ATGGCGATCTCCTAATAATGCTA 57.060 39.130 2.88 0.00 0.00 3.49
2106 10207 5.073311 TGGCGATCTCCTAATAATGCTAC 57.927 43.478 2.88 0.00 0.00 3.58
2126 10240 5.740099 GCTACTCTACTGTTTCGATGTTCTC 59.260 44.000 0.00 0.00 0.00 2.87
2144 10258 5.179533 GTTCTCAACTTCTGATAAGGGTCC 58.820 45.833 0.00 0.00 32.14 4.46
2162 10278 5.068636 GGGTCCGAGACTGTACTATATTGA 58.931 45.833 0.00 0.00 32.47 2.57
2163 10279 5.711036 GGGTCCGAGACTGTACTATATTGAT 59.289 44.000 0.00 0.00 32.47 2.57
2164 10280 6.883217 GGGTCCGAGACTGTACTATATTGATA 59.117 42.308 0.00 0.00 32.47 2.15
2311 10432 2.094894 CAGAAAGTAGCCATCAAGCGTG 59.905 50.000 0.00 0.00 38.01 5.34
2330 10451 3.506810 GTGAGGTTCTCATTCGTCTCAG 58.493 50.000 0.72 0.00 42.73 3.35
2332 10453 3.191581 TGAGGTTCTCATTCGTCTCAGAC 59.808 47.826 0.00 0.00 35.39 3.51
2334 10455 3.574396 AGGTTCTCATTCGTCTCAGACAA 59.426 43.478 5.45 0.00 32.09 3.18
2335 10456 3.675698 GGTTCTCATTCGTCTCAGACAAC 59.324 47.826 5.45 0.00 32.09 3.32
2336 10457 4.551388 GTTCTCATTCGTCTCAGACAACT 58.449 43.478 5.45 0.00 32.09 3.16
2337 10458 5.335740 GGTTCTCATTCGTCTCAGACAACTA 60.336 44.000 5.45 0.00 32.09 2.24
2338 10459 5.959618 TCTCATTCGTCTCAGACAACTAA 57.040 39.130 5.45 0.00 32.09 2.24
2339 10460 6.327279 TCTCATTCGTCTCAGACAACTAAA 57.673 37.500 5.45 0.00 32.09 1.85
2340 10461 6.925211 TCTCATTCGTCTCAGACAACTAAAT 58.075 36.000 5.45 0.00 32.09 1.40
2343 10464 7.323420 TCATTCGTCTCAGACAACTAAATCAT 58.677 34.615 5.45 0.00 32.09 2.45
2344 10465 7.819415 TCATTCGTCTCAGACAACTAAATCATT 59.181 33.333 5.45 0.00 32.09 2.57
2345 10466 6.951256 TCGTCTCAGACAACTAAATCATTG 57.049 37.500 5.45 0.00 32.09 2.82
2346 10467 6.687604 TCGTCTCAGACAACTAAATCATTGA 58.312 36.000 5.45 0.00 32.09 2.57
2347 10468 7.151976 TCGTCTCAGACAACTAAATCATTGAA 58.848 34.615 5.45 0.00 32.09 2.69
2348 10469 7.329471 TCGTCTCAGACAACTAAATCATTGAAG 59.671 37.037 5.45 0.00 32.09 3.02
2349 10470 7.412346 CGTCTCAGACAACTAAATCATTGAAGG 60.412 40.741 5.45 0.00 32.09 3.46
2350 10471 6.372659 TCTCAGACAACTAAATCATTGAAGGC 59.627 38.462 0.00 0.00 0.00 4.35
2351 10472 5.122239 TCAGACAACTAAATCATTGAAGGCG 59.878 40.000 0.00 0.00 0.00 5.52
2352 10473 4.096732 ACAACTAAATCATTGAAGGCGC 57.903 40.909 0.00 0.00 0.00 6.53
2353 10474 3.505680 ACAACTAAATCATTGAAGGCGCA 59.494 39.130 10.83 0.00 0.00 6.09
2354 10475 3.764885 ACTAAATCATTGAAGGCGCAC 57.235 42.857 10.83 0.00 0.00 5.34
2355 10476 2.095853 ACTAAATCATTGAAGGCGCACG 59.904 45.455 10.83 0.00 0.00 5.34
2356 10477 0.881118 AAATCATTGAAGGCGCACGT 59.119 45.000 10.83 0.00 0.00 4.49
2357 10478 0.881118 AATCATTGAAGGCGCACGTT 59.119 45.000 10.83 0.00 0.00 3.99
2358 10479 0.168788 ATCATTGAAGGCGCACGTTG 59.831 50.000 10.83 0.00 0.00 4.10
2359 10480 1.163420 TCATTGAAGGCGCACGTTGT 61.163 50.000 10.83 0.00 0.00 3.32
2361 10482 2.170260 ATTGAAGGCGCACGTTGTCG 62.170 55.000 10.83 0.00 43.34 4.35
2376 10497 4.612412 TCGCGCCCGTCCACTTTT 62.612 61.111 0.00 0.00 35.54 2.27
2377 10498 2.739287 CGCGCCCGTCCACTTTTA 60.739 61.111 0.00 0.00 0.00 1.52
2378 10499 2.865308 GCGCCCGTCCACTTTTAC 59.135 61.111 0.00 0.00 0.00 2.01
2379 10500 3.018840 GCGCCCGTCCACTTTTACG 62.019 63.158 0.00 0.00 38.80 3.18
2380 10501 1.373246 CGCCCGTCCACTTTTACGA 60.373 57.895 0.00 0.00 41.55 3.43
2381 10502 0.738412 CGCCCGTCCACTTTTACGAT 60.738 55.000 0.00 0.00 41.55 3.73
2382 10503 0.725117 GCCCGTCCACTTTTACGATG 59.275 55.000 0.00 0.00 41.55 3.84
2383 10504 1.673626 GCCCGTCCACTTTTACGATGA 60.674 52.381 0.00 0.00 41.55 2.92
2384 10505 2.690786 CCCGTCCACTTTTACGATGAA 58.309 47.619 0.00 0.00 41.55 2.57
2385 10506 3.068560 CCCGTCCACTTTTACGATGAAA 58.931 45.455 0.00 0.00 41.55 2.69
2386 10507 3.687698 CCCGTCCACTTTTACGATGAAAT 59.312 43.478 0.00 0.00 41.55 2.17
2387 10508 4.436852 CCCGTCCACTTTTACGATGAAATG 60.437 45.833 0.00 0.00 41.55 2.32
2388 10509 4.436852 CCGTCCACTTTTACGATGAAATGG 60.437 45.833 0.00 0.00 41.55 3.16
2389 10510 4.153475 CGTCCACTTTTACGATGAAATGGT 59.847 41.667 0.00 0.00 41.55 3.55
2390 10511 5.349270 CGTCCACTTTTACGATGAAATGGTA 59.651 40.000 0.00 0.00 41.55 3.25
2391 10512 6.455113 CGTCCACTTTTACGATGAAATGGTAG 60.455 42.308 0.00 0.00 38.75 3.18
2392 10513 6.370718 GTCCACTTTTACGATGAAATGGTAGT 59.629 38.462 0.00 0.00 38.75 2.73
2393 10514 7.546667 GTCCACTTTTACGATGAAATGGTAGTA 59.453 37.037 0.00 0.00 38.75 1.82
2394 10515 8.262227 TCCACTTTTACGATGAAATGGTAGTAT 58.738 33.333 0.00 0.00 38.75 2.12
2395 10516 8.889717 CCACTTTTACGATGAAATGGTAGTATT 58.110 33.333 0.00 0.00 38.75 1.89
2403 10524 8.310677 CGATGAAATGGTAGTATTTTTCAACG 57.689 34.615 10.81 10.81 43.08 4.10
2405 10526 9.490663 GATGAAATGGTAGTATTTTTCAACGAG 57.509 33.333 0.00 0.00 40.36 4.18
2406 10527 7.812648 TGAAATGGTAGTATTTTTCAACGAGG 58.187 34.615 0.00 0.00 35.71 4.63
2407 10528 7.662258 TGAAATGGTAGTATTTTTCAACGAGGA 59.338 33.333 0.00 0.00 35.71 3.71
2408 10529 7.989416 AATGGTAGTATTTTTCAACGAGGAA 57.011 32.000 0.00 0.00 0.00 3.36
2409 10530 7.989416 ATGGTAGTATTTTTCAACGAGGAAA 57.011 32.000 0.00 0.00 35.11 3.13
2410 10531 7.804843 TGGTAGTATTTTTCAACGAGGAAAA 57.195 32.000 12.58 12.58 43.07 2.29
2416 10537 4.911514 TTTTCAACGAGGAAAAAGAGGG 57.088 40.909 13.70 0.00 42.15 4.30
2417 10538 3.570912 TTCAACGAGGAAAAAGAGGGT 57.429 42.857 0.00 0.00 0.00 4.34
2418 10539 2.846193 TCAACGAGGAAAAAGAGGGTG 58.154 47.619 0.00 0.00 0.00 4.61
2419 10540 1.880027 CAACGAGGAAAAAGAGGGTGG 59.120 52.381 0.00 0.00 0.00 4.61
2420 10541 1.137697 ACGAGGAAAAAGAGGGTGGT 58.862 50.000 0.00 0.00 0.00 4.16
2421 10542 2.332117 ACGAGGAAAAAGAGGGTGGTA 58.668 47.619 0.00 0.00 0.00 3.25
2422 10543 2.910977 ACGAGGAAAAAGAGGGTGGTAT 59.089 45.455 0.00 0.00 0.00 2.73
2423 10544 3.329814 ACGAGGAAAAAGAGGGTGGTATT 59.670 43.478 0.00 0.00 0.00 1.89
2424 10545 4.533311 ACGAGGAAAAAGAGGGTGGTATTA 59.467 41.667 0.00 0.00 0.00 0.98
2425 10546 5.116882 CGAGGAAAAAGAGGGTGGTATTAG 58.883 45.833 0.00 0.00 0.00 1.73
2426 10547 5.338137 CGAGGAAAAAGAGGGTGGTATTAGT 60.338 44.000 0.00 0.00 0.00 2.24
2427 10548 6.127253 CGAGGAAAAAGAGGGTGGTATTAGTA 60.127 42.308 0.00 0.00 0.00 1.82
2428 10549 7.578458 AGGAAAAAGAGGGTGGTATTAGTAA 57.422 36.000 0.00 0.00 0.00 2.24
2429 10550 8.171337 AGGAAAAAGAGGGTGGTATTAGTAAT 57.829 34.615 0.17 0.17 0.00 1.89
2430 10551 8.053355 AGGAAAAAGAGGGTGGTATTAGTAATG 58.947 37.037 5.61 0.00 0.00 1.90
2431 10552 7.284716 GGAAAAAGAGGGTGGTATTAGTAATGG 59.715 40.741 5.61 0.00 0.00 3.16
2432 10553 7.519347 AAAAGAGGGTGGTATTAGTAATGGA 57.481 36.000 5.61 0.00 0.00 3.41
2433 10554 6.496144 AAGAGGGTGGTATTAGTAATGGAC 57.504 41.667 5.61 0.00 0.00 4.02
2434 10555 5.789535 AGAGGGTGGTATTAGTAATGGACT 58.210 41.667 5.61 0.00 42.69 3.85
2435 10556 5.839606 AGAGGGTGGTATTAGTAATGGACTC 59.160 44.000 5.61 5.13 39.81 3.36
2436 10557 5.535029 AGGGTGGTATTAGTAATGGACTCA 58.465 41.667 5.61 0.00 39.81 3.41
2437 10558 5.365895 AGGGTGGTATTAGTAATGGACTCAC 59.634 44.000 5.61 7.08 39.81 3.51
2438 10559 5.129815 GGGTGGTATTAGTAATGGACTCACA 59.870 44.000 5.61 0.00 39.81 3.58
2439 10560 6.183361 GGGTGGTATTAGTAATGGACTCACAT 60.183 42.308 5.61 0.00 39.81 3.21
2440 10561 6.706270 GGTGGTATTAGTAATGGACTCACATG 59.294 42.308 5.61 0.00 39.81 3.21
2441 10562 7.272978 GTGGTATTAGTAATGGACTCACATGT 58.727 38.462 5.61 0.00 39.81 3.21
2442 10563 7.438459 GTGGTATTAGTAATGGACTCACATGTC 59.562 40.741 5.61 0.00 39.81 3.06
2443 10564 7.125053 TGGTATTAGTAATGGACTCACATGTCA 59.875 37.037 5.61 0.00 39.81 3.58
2444 10565 7.653713 GGTATTAGTAATGGACTCACATGTCAG 59.346 40.741 5.61 0.00 39.81 3.51
2445 10566 4.478206 AGTAATGGACTCACATGTCAGG 57.522 45.455 0.55 0.00 38.61 3.86
2446 10567 3.840666 AGTAATGGACTCACATGTCAGGT 59.159 43.478 0.55 0.00 38.61 4.00
2447 10568 3.795688 AATGGACTCACATGTCAGGTT 57.204 42.857 0.55 0.00 38.61 3.50
2448 10569 3.795688 ATGGACTCACATGTCAGGTTT 57.204 42.857 0.55 0.00 38.61 3.27
2449 10570 3.576078 TGGACTCACATGTCAGGTTTT 57.424 42.857 0.55 0.00 38.61 2.43
2450 10571 3.897239 TGGACTCACATGTCAGGTTTTT 58.103 40.909 0.55 0.00 38.61 1.94
2451 10572 5.042463 TGGACTCACATGTCAGGTTTTTA 57.958 39.130 0.55 0.00 38.61 1.52
2452 10573 5.063204 TGGACTCACATGTCAGGTTTTTAG 58.937 41.667 0.55 0.00 38.61 1.85
2453 10574 5.063880 GGACTCACATGTCAGGTTTTTAGT 58.936 41.667 0.55 0.00 38.61 2.24
2454 10575 5.531287 GGACTCACATGTCAGGTTTTTAGTT 59.469 40.000 0.55 0.00 38.61 2.24
2455 10576 6.039382 GGACTCACATGTCAGGTTTTTAGTTT 59.961 38.462 0.55 0.00 38.61 2.66
2456 10577 7.404671 ACTCACATGTCAGGTTTTTAGTTTT 57.595 32.000 0.55 0.00 0.00 2.43
2457 10578 7.480810 ACTCACATGTCAGGTTTTTAGTTTTC 58.519 34.615 0.55 0.00 0.00 2.29
2458 10579 7.122055 ACTCACATGTCAGGTTTTTAGTTTTCA 59.878 33.333 0.55 0.00 0.00 2.69
2459 10580 7.479980 TCACATGTCAGGTTTTTAGTTTTCAG 58.520 34.615 0.00 0.00 0.00 3.02
2460 10581 7.338196 TCACATGTCAGGTTTTTAGTTTTCAGA 59.662 33.333 0.00 0.00 0.00 3.27
2461 10582 7.973388 CACATGTCAGGTTTTTAGTTTTCAGAA 59.027 33.333 0.00 0.00 0.00 3.02
2462 10583 8.527810 ACATGTCAGGTTTTTAGTTTTCAGAAA 58.472 29.630 0.00 0.00 0.00 2.52
2463 10584 9.533253 CATGTCAGGTTTTTAGTTTTCAGAAAT 57.467 29.630 0.00 0.00 0.00 2.17
2464 10585 8.925161 TGTCAGGTTTTTAGTTTTCAGAAATG 57.075 30.769 0.00 0.00 0.00 2.32
2465 10586 7.978975 TGTCAGGTTTTTAGTTTTCAGAAATGG 59.021 33.333 0.00 0.00 0.00 3.16
2466 10587 8.194769 GTCAGGTTTTTAGTTTTCAGAAATGGA 58.805 33.333 0.00 0.00 0.00 3.41
2467 10588 8.754080 TCAGGTTTTTAGTTTTCAGAAATGGAA 58.246 29.630 0.00 0.00 0.00 3.53
2468 10589 9.034544 CAGGTTTTTAGTTTTCAGAAATGGAAG 57.965 33.333 0.00 0.00 0.00 3.46
2469 10590 8.977412 AGGTTTTTAGTTTTCAGAAATGGAAGA 58.023 29.630 0.00 0.00 0.00 2.87
2470 10591 9.031360 GGTTTTTAGTTTTCAGAAATGGAAGAC 57.969 33.333 0.00 0.00 31.54 3.01
2471 10592 9.803315 GTTTTTAGTTTTCAGAAATGGAAGACT 57.197 29.630 0.00 0.00 41.11 3.24
2476 10597 8.980481 AGTTTTCAGAAATGGAAGACTTAGAA 57.020 30.769 0.00 0.00 36.61 2.10
2477 10598 9.061435 AGTTTTCAGAAATGGAAGACTTAGAAG 57.939 33.333 0.00 0.00 36.61 2.85
2478 10599 9.057089 GTTTTCAGAAATGGAAGACTTAGAAGA 57.943 33.333 0.00 0.00 0.00 2.87
2479 10600 9.799106 TTTTCAGAAATGGAAGACTTAGAAGAT 57.201 29.630 0.00 0.00 0.00 2.40
2480 10601 9.799106 TTTCAGAAATGGAAGACTTAGAAGATT 57.201 29.630 0.00 0.00 0.00 2.40
2506 10627 6.932356 AAGCATTAGTAATGGACTCACATG 57.068 37.500 21.56 0.00 39.81 3.21
2507 10628 4.818546 AGCATTAGTAATGGACTCACATGC 59.181 41.667 21.56 7.23 41.91 4.06
2508 10629 4.023707 GCATTAGTAATGGACTCACATGCC 60.024 45.833 21.56 0.19 38.82 4.40
2509 10630 5.371526 CATTAGTAATGGACTCACATGCCT 58.628 41.667 14.14 0.00 39.81 4.75
2510 10631 3.550437 AGTAATGGACTCACATGCCTC 57.450 47.619 0.00 0.00 29.95 4.70
2511 10632 2.171448 AGTAATGGACTCACATGCCTCC 59.829 50.000 0.00 0.00 29.95 4.30
2512 10633 0.994247 AATGGACTCACATGCCTCCA 59.006 50.000 0.00 0.00 37.22 3.86
2513 10634 0.254178 ATGGACTCACATGCCTCCAC 59.746 55.000 0.00 0.00 35.61 4.02
2514 10635 1.448540 GGACTCACATGCCTCCACG 60.449 63.158 0.00 0.00 0.00 4.94
2515 10636 2.046892 ACTCACATGCCTCCACGC 60.047 61.111 0.00 0.00 0.00 5.34
2516 10637 2.267006 CTCACATGCCTCCACGCT 59.733 61.111 0.00 0.00 0.00 5.07
2517 10638 1.257750 ACTCACATGCCTCCACGCTA 61.258 55.000 0.00 0.00 0.00 4.26
2518 10639 0.807667 CTCACATGCCTCCACGCTAC 60.808 60.000 0.00 0.00 0.00 3.58
2519 10640 1.079197 CACATGCCTCCACGCTACA 60.079 57.895 0.00 0.00 0.00 2.74
2520 10641 0.673333 CACATGCCTCCACGCTACAA 60.673 55.000 0.00 0.00 0.00 2.41
2521 10642 0.673644 ACATGCCTCCACGCTACAAC 60.674 55.000 0.00 0.00 0.00 3.32
2522 10643 1.447838 ATGCCTCCACGCTACAACG 60.448 57.895 0.00 0.00 39.50 4.10
2523 10644 2.813908 GCCTCCACGCTACAACGG 60.814 66.667 0.00 0.00 37.37 4.44
2524 10645 2.813908 CCTCCACGCTACAACGGC 60.814 66.667 0.00 0.00 37.37 5.68
2525 10646 2.048597 CTCCACGCTACAACGGCA 60.049 61.111 0.00 0.00 37.37 5.69
2526 10647 1.447838 CTCCACGCTACAACGGCAT 60.448 57.895 0.00 0.00 37.37 4.40
2527 10648 1.421410 CTCCACGCTACAACGGCATC 61.421 60.000 0.00 0.00 37.37 3.91
2528 10649 2.461110 CCACGCTACAACGGCATCC 61.461 63.158 0.00 0.00 37.37 3.51
2529 10650 1.447838 CACGCTACAACGGCATCCT 60.448 57.895 0.00 0.00 37.37 3.24
2530 10651 1.447838 ACGCTACAACGGCATCCTG 60.448 57.895 0.00 0.00 37.37 3.86
2531 10652 1.153647 CGCTACAACGGCATCCTGA 60.154 57.895 0.00 0.00 0.00 3.86
2532 10653 1.421410 CGCTACAACGGCATCCTGAC 61.421 60.000 0.00 0.00 0.00 3.51
2533 10654 1.090052 GCTACAACGGCATCCTGACC 61.090 60.000 0.00 0.00 0.00 4.02
2534 10655 0.462047 CTACAACGGCATCCTGACCC 60.462 60.000 0.00 0.00 0.00 4.46
2535 10656 0.907704 TACAACGGCATCCTGACCCT 60.908 55.000 0.00 0.00 0.00 4.34
2536 10657 1.746615 CAACGGCATCCTGACCCTG 60.747 63.158 0.00 0.00 0.00 4.45
2537 10658 3.628646 AACGGCATCCTGACCCTGC 62.629 63.158 0.00 0.00 35.16 4.85
2539 10660 4.864334 GGCATCCTGACCCTGCGG 62.864 72.222 0.00 0.00 36.76 5.69
2540 10661 3.785859 GCATCCTGACCCTGCGGA 61.786 66.667 0.00 0.00 0.00 5.54
2541 10662 2.503061 CATCCTGACCCTGCGGAG 59.497 66.667 0.00 0.00 0.00 4.63
2542 10663 2.039624 ATCCTGACCCTGCGGAGT 59.960 61.111 2.36 0.00 0.00 3.85
2543 10664 1.613630 ATCCTGACCCTGCGGAGTT 60.614 57.895 2.36 0.00 0.00 3.01
2544 10665 1.617947 ATCCTGACCCTGCGGAGTTC 61.618 60.000 2.36 0.00 0.00 3.01
2545 10666 2.266055 CTGACCCTGCGGAGTTCC 59.734 66.667 2.36 0.00 0.00 3.62
2546 10667 2.203788 TGACCCTGCGGAGTTCCT 60.204 61.111 2.36 0.00 0.00 3.36
2547 10668 2.266055 GACCCTGCGGAGTTCCTG 59.734 66.667 2.36 0.00 0.00 3.86
2548 10669 3.316573 GACCCTGCGGAGTTCCTGG 62.317 68.421 2.36 0.00 0.00 4.45
2549 10670 3.003173 CCCTGCGGAGTTCCTGGA 61.003 66.667 2.36 0.00 0.00 3.86
2550 10671 2.581354 CCTGCGGAGTTCCTGGAG 59.419 66.667 2.36 1.40 0.00 3.86
2551 10672 2.286523 CCTGCGGAGTTCCTGGAGT 61.287 63.158 2.36 0.00 0.00 3.85
2552 10673 1.674057 CTGCGGAGTTCCTGGAGTT 59.326 57.895 0.00 0.00 0.00 3.01
2553 10674 0.671781 CTGCGGAGTTCCTGGAGTTG 60.672 60.000 0.00 0.00 0.00 3.16
2554 10675 1.118965 TGCGGAGTTCCTGGAGTTGA 61.119 55.000 0.00 0.00 0.00 3.18
2555 10676 0.390472 GCGGAGTTCCTGGAGTTGAG 60.390 60.000 0.00 0.00 0.00 3.02
2556 10677 0.390472 CGGAGTTCCTGGAGTTGAGC 60.390 60.000 0.00 0.00 0.00 4.26
2557 10678 0.687354 GGAGTTCCTGGAGTTGAGCA 59.313 55.000 0.00 0.00 0.00 4.26
2558 10679 1.280421 GGAGTTCCTGGAGTTGAGCAT 59.720 52.381 0.00 0.00 0.00 3.79
2559 10680 2.626840 GAGTTCCTGGAGTTGAGCATC 58.373 52.381 0.00 0.00 0.00 3.91
2560 10681 1.066573 AGTTCCTGGAGTTGAGCATCG 60.067 52.381 0.00 0.00 38.61 3.84
2561 10682 1.066858 GTTCCTGGAGTTGAGCATCGA 60.067 52.381 0.00 0.00 38.61 3.59
2562 10683 0.820226 TCCTGGAGTTGAGCATCGAG 59.180 55.000 0.00 0.00 38.61 4.04
2563 10684 0.179089 CCTGGAGTTGAGCATCGAGG 60.179 60.000 0.00 0.00 38.61 4.63
2564 10685 0.809241 CTGGAGTTGAGCATCGAGGC 60.809 60.000 15.45 15.45 38.61 4.70
2565 10686 1.880340 GGAGTTGAGCATCGAGGCG 60.880 63.158 17.28 0.00 38.61 5.52
2566 10687 1.880340 GAGTTGAGCATCGAGGCGG 60.880 63.158 17.28 0.00 38.61 6.13
2567 10688 3.567797 GTTGAGCATCGAGGCGGC 61.568 66.667 17.28 13.35 38.61 6.53
2568 10689 4.838152 TTGAGCATCGAGGCGGCC 62.838 66.667 17.28 12.11 38.61 6.13
2570 10691 4.838152 GAGCATCGAGGCGGCCAA 62.838 66.667 23.09 6.50 39.27 4.52
2583 10704 3.093278 GCCAACGGCGATGAGAAG 58.907 61.111 19.20 2.74 39.62 2.85
2584 10705 2.464459 GCCAACGGCGATGAGAAGG 61.464 63.158 19.20 2.24 39.62 3.46
2585 10706 1.815421 CCAACGGCGATGAGAAGGG 60.815 63.158 19.20 0.00 0.00 3.95
2586 10707 2.125106 AACGGCGATGAGAAGGGC 60.125 61.111 16.62 0.00 0.00 5.19
2587 10708 2.954684 AACGGCGATGAGAAGGGCA 61.955 57.895 16.62 0.00 0.00 5.36
2588 10709 2.109799 CGGCGATGAGAAGGGCAT 59.890 61.111 0.00 0.00 0.00 4.40
2589 10710 2.249535 CGGCGATGAGAAGGGCATG 61.250 63.158 0.00 0.00 0.00 4.06
2590 10711 1.895707 GGCGATGAGAAGGGCATGG 60.896 63.158 0.00 0.00 0.00 3.66
2591 10712 2.550101 GCGATGAGAAGGGCATGGC 61.550 63.158 11.56 11.56 39.60 4.40
2592 10713 1.153107 CGATGAGAAGGGCATGGCA 60.153 57.895 22.06 0.00 0.00 4.92
2593 10714 0.749091 CGATGAGAAGGGCATGGCAA 60.749 55.000 22.06 0.00 0.00 4.52
2594 10715 1.477553 GATGAGAAGGGCATGGCAAA 58.522 50.000 22.06 0.00 0.00 3.68
2595 10716 1.135721 GATGAGAAGGGCATGGCAAAC 59.864 52.381 22.06 10.76 0.00 2.93
2596 10717 0.112995 TGAGAAGGGCATGGCAAACT 59.887 50.000 22.06 15.26 0.00 2.66
2597 10718 0.529378 GAGAAGGGCATGGCAAACTG 59.471 55.000 22.06 0.00 0.00 3.16
2598 10719 0.901580 AGAAGGGCATGGCAAACTGG 60.902 55.000 22.06 0.00 0.00 4.00
2599 10720 1.152269 AAGGGCATGGCAAACTGGT 60.152 52.632 22.06 0.00 0.00 4.00
2600 10721 0.763986 AAGGGCATGGCAAACTGGTT 60.764 50.000 22.06 0.00 0.00 3.67
2601 10722 0.763986 AGGGCATGGCAAACTGGTTT 60.764 50.000 22.06 0.00 0.00 3.27
2602 10723 0.108396 GGGCATGGCAAACTGGTTTT 59.892 50.000 22.06 0.00 0.00 2.43
2603 10724 1.511850 GGCATGGCAAACTGGTTTTC 58.488 50.000 15.47 0.00 0.00 2.29
2604 10725 1.511850 GCATGGCAAACTGGTTTTCC 58.488 50.000 7.70 7.70 36.59 3.13
2605 10726 1.202627 GCATGGCAAACTGGTTTTCCA 60.203 47.619 16.92 16.92 46.62 3.53
2613 10734 4.863415 TGGTTTTCCATGGCCCTC 57.137 55.556 6.96 0.00 46.22 4.30
2614 10735 1.857049 TGGTTTTCCATGGCCCTCA 59.143 52.632 6.96 0.00 46.22 3.86
2615 10736 0.189574 TGGTTTTCCATGGCCCTCAA 59.810 50.000 6.96 0.00 46.22 3.02
2616 10737 0.897621 GGTTTTCCATGGCCCTCAAG 59.102 55.000 6.96 0.00 40.31 3.02
2617 10738 0.897621 GTTTTCCATGGCCCTCAAGG 59.102 55.000 6.96 0.00 35.66 3.61
2618 10739 0.783206 TTTTCCATGGCCCTCAAGGA 59.217 50.000 6.96 0.00 41.04 3.36
2642 10763 3.706373 GGGCTCGTGGCTCCTCAA 61.706 66.667 11.00 0.00 41.46 3.02
2643 10764 2.586792 GGCTCGTGGCTCCTCAAT 59.413 61.111 3.50 0.00 41.46 2.57
2644 10765 1.522580 GGCTCGTGGCTCCTCAATC 60.523 63.158 3.50 0.00 41.46 2.67
2645 10766 1.519719 GCTCGTGGCTCCTCAATCT 59.480 57.895 0.00 0.00 38.06 2.40
2646 10767 0.107945 GCTCGTGGCTCCTCAATCTT 60.108 55.000 0.00 0.00 38.06 2.40
2647 10768 1.933247 CTCGTGGCTCCTCAATCTTC 58.067 55.000 0.00 0.00 0.00 2.87
2648 10769 0.537188 TCGTGGCTCCTCAATCTTCC 59.463 55.000 0.00 0.00 0.00 3.46
2649 10770 0.539051 CGTGGCTCCTCAATCTTCCT 59.461 55.000 0.00 0.00 0.00 3.36
2650 10771 1.757118 CGTGGCTCCTCAATCTTCCTA 59.243 52.381 0.00 0.00 0.00 2.94
2651 10772 2.366916 CGTGGCTCCTCAATCTTCCTAT 59.633 50.000 0.00 0.00 0.00 2.57
2652 10773 3.181461 CGTGGCTCCTCAATCTTCCTATT 60.181 47.826 0.00 0.00 0.00 1.73
2653 10774 4.133078 GTGGCTCCTCAATCTTCCTATTG 58.867 47.826 0.00 0.00 38.05 1.90
2654 10775 3.137176 TGGCTCCTCAATCTTCCTATTGG 59.863 47.826 0.00 0.00 37.44 3.16
2655 10776 3.497584 GGCTCCTCAATCTTCCTATTGGG 60.498 52.174 0.00 0.00 37.13 4.12
2656 10777 3.137360 GCTCCTCAATCTTCCTATTGGGT 59.863 47.826 0.00 0.00 35.86 4.51
2657 10778 4.745172 GCTCCTCAATCTTCCTATTGGGTC 60.745 50.000 0.00 0.00 35.86 4.46
2658 10779 4.370776 TCCTCAATCTTCCTATTGGGTCA 58.629 43.478 0.00 0.00 35.86 4.02
2800 10921 1.856265 CGTGGAAGACAAGCTTGGCC 61.856 60.000 28.83 22.15 36.67 5.36
2920 11050 7.268586 GGACGATCACAATCATAATAGGCTAT 58.731 38.462 0.00 0.00 31.76 2.97
3079 12769 4.384868 GCCTCCTGTTACCATTAGCCTAAA 60.385 45.833 0.00 0.00 0.00 1.85
3097 13169 1.827399 AAACGCACAGATCGGGACCT 61.827 55.000 0.00 0.00 0.00 3.85
3105 13177 1.000041 AGATCGGGACCTCCTACCCT 61.000 60.000 0.00 0.00 43.57 4.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 2.028420 TGAAGGGATGCAGATTGTCG 57.972 50.000 0.00 0.00 0.00 4.35
3 4 3.657398 TGATGAAGGGATGCAGATTGT 57.343 42.857 0.00 0.00 0.00 2.71
6 7 5.205821 TCAAATTGATGAAGGGATGCAGAT 58.794 37.500 0.00 0.00 0.00 2.90
7 8 4.602107 TCAAATTGATGAAGGGATGCAGA 58.398 39.130 0.00 0.00 0.00 4.26
8 9 4.994907 TCAAATTGATGAAGGGATGCAG 57.005 40.909 0.00 0.00 0.00 4.41
9 10 5.537295 CCTATCAAATTGATGAAGGGATGCA 59.463 40.000 17.93 0.00 37.70 3.96
10 11 5.771666 TCCTATCAAATTGATGAAGGGATGC 59.228 40.000 19.32 0.00 37.70 3.91
11 12 7.002879 ACTCCTATCAAATTGATGAAGGGATG 58.997 38.462 19.32 13.87 37.70 3.51
12 13 7.159201 ACTCCTATCAAATTGATGAAGGGAT 57.841 36.000 19.32 9.23 37.70 3.85
13 14 6.581388 ACTCCTATCAAATTGATGAAGGGA 57.419 37.500 19.32 17.10 37.70 4.20
14 15 6.429385 GCTACTCCTATCAAATTGATGAAGGG 59.571 42.308 19.32 14.71 37.70 3.95
16 17 6.925718 TCGCTACTCCTATCAAATTGATGAAG 59.074 38.462 17.93 13.55 37.70 3.02
18 19 6.405278 TCGCTACTCCTATCAAATTGATGA 57.595 37.500 17.93 7.20 37.70 2.92
19 20 6.401903 GCATCGCTACTCCTATCAAATTGATG 60.402 42.308 17.93 8.24 37.70 3.07
20 21 5.641209 GCATCGCTACTCCTATCAAATTGAT 59.359 40.000 13.43 13.43 40.72 2.57
21 22 4.991056 GCATCGCTACTCCTATCAAATTGA 59.009 41.667 0.00 0.00 0.00 2.57
23 24 4.202357 TGGCATCGCTACTCCTATCAAATT 60.202 41.667 0.00 0.00 0.00 1.82
24 25 3.324846 TGGCATCGCTACTCCTATCAAAT 59.675 43.478 0.00 0.00 0.00 2.32
25 26 2.698274 TGGCATCGCTACTCCTATCAAA 59.302 45.455 0.00 0.00 0.00 2.69
26 27 2.316108 TGGCATCGCTACTCCTATCAA 58.684 47.619 0.00 0.00 0.00 2.57
27 28 1.995376 TGGCATCGCTACTCCTATCA 58.005 50.000 0.00 0.00 0.00 2.15
29 30 2.598565 TCTTGGCATCGCTACTCCTAT 58.401 47.619 0.00 0.00 0.00 2.57
30 31 2.067365 TCTTGGCATCGCTACTCCTA 57.933 50.000 0.00 0.00 0.00 2.94
31 32 1.069823 CATCTTGGCATCGCTACTCCT 59.930 52.381 0.00 0.00 0.00 3.69
34 35 2.549563 CCATCATCTTGGCATCGCTACT 60.550 50.000 0.00 0.00 0.00 2.57
35 36 1.802960 CCATCATCTTGGCATCGCTAC 59.197 52.381 0.00 0.00 0.00 3.58
36 37 2.174363 CCATCATCTTGGCATCGCTA 57.826 50.000 0.00 0.00 0.00 4.26
44 45 3.278668 AGTCTGAAGCCATCATCTTGG 57.721 47.619 0.00 0.00 37.44 3.61
46 47 5.426504 CAGTAAGTCTGAAGCCATCATCTT 58.573 41.667 10.29 10.29 46.27 2.40
59 60 9.495572 GGAGGGAATAATAAATCAGTAAGTCTG 57.504 37.037 0.00 0.00 44.85 3.51
60 61 8.368668 CGGAGGGAATAATAAATCAGTAAGTCT 58.631 37.037 0.00 0.00 0.00 3.24
61 62 7.117956 GCGGAGGGAATAATAAATCAGTAAGTC 59.882 40.741 0.00 0.00 0.00 3.01
62 63 6.935208 GCGGAGGGAATAATAAATCAGTAAGT 59.065 38.462 0.00 0.00 0.00 2.24
63 64 6.371825 GGCGGAGGGAATAATAAATCAGTAAG 59.628 42.308 0.00 0.00 0.00 2.34
66 67 4.506802 GGGCGGAGGGAATAATAAATCAGT 60.507 45.833 0.00 0.00 0.00 3.41
67 68 4.010349 GGGCGGAGGGAATAATAAATCAG 58.990 47.826 0.00 0.00 0.00 2.90
68 69 3.245122 GGGGCGGAGGGAATAATAAATCA 60.245 47.826 0.00 0.00 0.00 2.57
69 70 3.245122 TGGGGCGGAGGGAATAATAAATC 60.245 47.826 0.00 0.00 0.00 2.17
70 71 2.719705 TGGGGCGGAGGGAATAATAAAT 59.280 45.455 0.00 0.00 0.00 1.40
71 72 2.136863 TGGGGCGGAGGGAATAATAAA 58.863 47.619 0.00 0.00 0.00 1.40
72 73 1.822425 TGGGGCGGAGGGAATAATAA 58.178 50.000 0.00 0.00 0.00 1.40
73 74 2.053747 ATGGGGCGGAGGGAATAATA 57.946 50.000 0.00 0.00 0.00 0.98
75 76 1.822425 TTATGGGGCGGAGGGAATAA 58.178 50.000 0.00 0.00 0.00 1.40
76 77 2.053747 ATTATGGGGCGGAGGGAATA 57.946 50.000 0.00 0.00 0.00 1.75
77 78 2.053747 TATTATGGGGCGGAGGGAAT 57.946 50.000 0.00 0.00 0.00 3.01
78 79 2.053747 ATATTATGGGGCGGAGGGAA 57.946 50.000 0.00 0.00 0.00 3.97
79 80 2.953093 TATATTATGGGGCGGAGGGA 57.047 50.000 0.00 0.00 0.00 4.20
81 82 4.030913 TCTCTTATATTATGGGGCGGAGG 58.969 47.826 0.00 0.00 0.00 4.30
82 83 4.466370 TGTCTCTTATATTATGGGGCGGAG 59.534 45.833 0.00 0.00 0.00 4.63
83 84 4.222145 GTGTCTCTTATATTATGGGGCGGA 59.778 45.833 0.00 0.00 0.00 5.54
86 87 7.038941 AGTGTAGTGTCTCTTATATTATGGGGC 60.039 40.741 0.00 0.00 0.00 5.80
119 120 6.645415 CCGTCTCATAATATAGGAGCGTTTTT 59.355 38.462 11.65 0.00 36.60 1.94
120 121 6.015688 TCCGTCTCATAATATAGGAGCGTTTT 60.016 38.462 11.65 0.00 36.60 2.43
121 122 5.475909 TCCGTCTCATAATATAGGAGCGTTT 59.524 40.000 11.65 0.00 36.60 3.60
122 123 5.008331 TCCGTCTCATAATATAGGAGCGTT 58.992 41.667 11.65 0.00 36.60 4.84
123 124 4.586884 TCCGTCTCATAATATAGGAGCGT 58.413 43.478 11.65 0.00 36.60 5.07
125 126 4.339814 CCCTCCGTCTCATAATATAGGAGC 59.660 50.000 3.27 0.00 41.62 4.70
128 129 4.339814 GCTCCCTCCGTCTCATAATATAGG 59.660 50.000 0.00 0.00 0.00 2.57
129 130 4.950475 TGCTCCCTCCGTCTCATAATATAG 59.050 45.833 0.00 0.00 0.00 1.31
130 131 4.930696 TGCTCCCTCCGTCTCATAATATA 58.069 43.478 0.00 0.00 0.00 0.86
131 132 3.779444 TGCTCCCTCCGTCTCATAATAT 58.221 45.455 0.00 0.00 0.00 1.28
132 133 3.238788 TGCTCCCTCCGTCTCATAATA 57.761 47.619 0.00 0.00 0.00 0.98
133 134 2.088104 TGCTCCCTCCGTCTCATAAT 57.912 50.000 0.00 0.00 0.00 1.28
134 135 2.088104 ATGCTCCCTCCGTCTCATAA 57.912 50.000 0.00 0.00 0.00 1.90
135 136 2.088104 AATGCTCCCTCCGTCTCATA 57.912 50.000 0.00 0.00 0.00 2.15
136 137 1.207791 AAATGCTCCCTCCGTCTCAT 58.792 50.000 0.00 0.00 0.00 2.90
139 140 0.693049 ACAAAATGCTCCCTCCGTCT 59.307 50.000 0.00 0.00 0.00 4.18
140 141 2.396590 TACAAAATGCTCCCTCCGTC 57.603 50.000 0.00 0.00 0.00 4.79
141 142 2.871096 TTACAAAATGCTCCCTCCGT 57.129 45.000 0.00 0.00 0.00 4.69
151 152 7.440856 AGTTGTTTACCAAGGCATTACAAAATG 59.559 33.333 0.00 0.00 38.66 2.32
152 153 7.505258 AGTTGTTTACCAAGGCATTACAAAAT 58.495 30.769 0.00 0.00 32.51 1.82
153 154 6.879400 AGTTGTTTACCAAGGCATTACAAAA 58.121 32.000 0.00 0.00 32.51 2.44
154 155 6.096987 TGAGTTGTTTACCAAGGCATTACAAA 59.903 34.615 0.00 0.00 32.51 2.83
156 157 5.133941 TGAGTTGTTTACCAAGGCATTACA 58.866 37.500 0.00 0.00 32.51 2.41
158 159 6.716934 TTTGAGTTGTTTACCAAGGCATTA 57.283 33.333 0.00 0.00 32.51 1.90
159 160 5.606348 TTTGAGTTGTTTACCAAGGCATT 57.394 34.783 0.00 0.00 32.51 3.56
160 161 5.606348 TTTTGAGTTGTTTACCAAGGCAT 57.394 34.783 0.00 0.00 32.51 4.40
161 162 5.606348 ATTTTGAGTTGTTTACCAAGGCA 57.394 34.783 0.00 0.00 32.51 4.75
162 163 8.520351 ACTATATTTTGAGTTGTTTACCAAGGC 58.480 33.333 0.00 0.00 32.51 4.35
174 175 6.332630 GGTGCATGCAACTATATTTTGAGTT 58.667 36.000 28.48 0.00 36.31 3.01
176 177 4.971830 CGGTGCATGCAACTATATTTTGAG 59.028 41.667 31.64 9.70 0.00 3.02
177 178 4.397730 ACGGTGCATGCAACTATATTTTGA 59.602 37.500 31.64 0.00 0.00 2.69
178 179 4.671377 ACGGTGCATGCAACTATATTTTG 58.329 39.130 31.64 16.65 0.00 2.44
180 181 4.199310 AGACGGTGCATGCAACTATATTT 58.801 39.130 31.64 10.00 0.00 1.40
182 183 3.475566 AGACGGTGCATGCAACTATAT 57.524 42.857 31.64 15.47 0.00 0.86
183 184 2.979814 AGACGGTGCATGCAACTATA 57.020 45.000 31.64 0.93 0.00 1.31
184 185 2.113860 AAGACGGTGCATGCAACTAT 57.886 45.000 31.64 20.56 0.00 2.12
185 186 2.753055 TAAGACGGTGCATGCAACTA 57.247 45.000 31.64 15.63 0.00 2.24
186 187 1.890876 TTAAGACGGTGCATGCAACT 58.109 45.000 31.64 19.37 0.00 3.16
187 188 2.518949 CATTAAGACGGTGCATGCAAC 58.481 47.619 26.17 26.17 0.00 4.17
188 189 1.135431 GCATTAAGACGGTGCATGCAA 60.135 47.619 24.58 4.09 40.06 4.08
189 190 0.451383 GCATTAAGACGGTGCATGCA 59.549 50.000 18.46 18.46 40.06 3.96
197 198 0.098728 CGGCCTTTGCATTAAGACGG 59.901 55.000 0.00 0.00 40.13 4.79
202 203 1.684049 CCCCCGGCCTTTGCATTAA 60.684 57.895 0.00 0.00 40.13 1.40
204 205 4.315264 ACCCCCGGCCTTTGCATT 62.315 61.111 0.00 0.00 40.13 3.56
214 215 1.209621 TAAAGAAGGATGACCCCCGG 58.790 55.000 0.00 0.00 36.73 5.73
242 2282 9.753674 AACAATATCTTTATTTTGAGGAGTGGA 57.246 29.630 0.00 0.00 30.98 4.02
243 2283 9.793252 CAACAATATCTTTATTTTGAGGAGTGG 57.207 33.333 0.00 0.00 30.98 4.00
284 2328 7.596749 TGACTCGTTCCAGAAAAATATCTTC 57.403 36.000 0.00 0.00 0.00 2.87
293 2339 1.409790 TCGGTTGACTCGTTCCAGAAA 59.590 47.619 0.00 0.00 0.00 2.52
296 2342 0.596577 TCTCGGTTGACTCGTTCCAG 59.403 55.000 0.00 0.00 0.00 3.86
326 2372 8.737168 TGAATCGAAGATTCTTCCAATTATGT 57.263 30.769 18.46 0.99 45.12 2.29
333 2379 5.118990 GGTGATGAATCGAAGATTCTTCCA 58.881 41.667 23.66 11.81 45.12 3.53
370 2416 3.511146 TCAATGGGAAGGCATCTGTTTTC 59.489 43.478 0.00 0.00 0.00 2.29
371 2417 3.509442 TCAATGGGAAGGCATCTGTTTT 58.491 40.909 0.00 0.00 0.00 2.43
466 3853 6.654582 TGCTTAAGATTCAGCTTTGTGTATCA 59.345 34.615 6.67 0.00 36.92 2.15
472 3859 6.830873 AGATTGCTTAAGATTCAGCTTTGT 57.169 33.333 6.67 0.00 36.92 2.83
473 3860 6.530534 CCAAGATTGCTTAAGATTCAGCTTTG 59.469 38.462 6.67 0.41 36.92 2.77
474 3861 6.350780 CCCAAGATTGCTTAAGATTCAGCTTT 60.351 38.462 6.67 0.00 36.92 3.51
487 5188 6.475504 CCCTAAAAATTTCCCAAGATTGCTT 58.524 36.000 0.00 0.00 33.74 3.91
515 5216 2.369568 TCCCACCCATCCCATCCC 60.370 66.667 0.00 0.00 0.00 3.85
518 5219 0.046242 TTCTCTCCCACCCATCCCAT 59.954 55.000 0.00 0.00 0.00 4.00
519 5220 0.046242 ATTCTCTCCCACCCATCCCA 59.954 55.000 0.00 0.00 0.00 4.37
520 5221 1.226311 AATTCTCTCCCACCCATCCC 58.774 55.000 0.00 0.00 0.00 3.85
521 5222 3.388552 AAAATTCTCTCCCACCCATCC 57.611 47.619 0.00 0.00 0.00 3.51
546 5247 8.387190 AGCTACAAAATTCTAACGTAACCTTT 57.613 30.769 0.00 0.00 0.00 3.11
575 5277 3.775910 ACCGATAATCCTACACCTAGGG 58.224 50.000 14.81 4.64 40.31 3.53
598 5300 6.581166 GGTTCGTATTTGCTCTTAAGTTTTGG 59.419 38.462 1.63 0.00 0.00 3.28
606 5308 3.932822 TGCTGGTTCGTATTTGCTCTTA 58.067 40.909 0.00 0.00 0.00 2.10
625 5327 3.088532 TCCTAACCATTGAACCACATGC 58.911 45.455 0.00 0.00 0.00 4.06
635 5337 1.881973 CCATCGCCATCCTAACCATTG 59.118 52.381 0.00 0.00 0.00 2.82
647 5349 2.994699 CAGGGGTTACCATCGCCA 59.005 61.111 2.98 0.00 43.89 5.69
649 5351 2.516225 GGCAGGGGTTACCATCGC 60.516 66.667 2.98 1.46 43.89 4.58
668 5370 2.998670 CGCACATCACTTGAACTCTGAT 59.001 45.455 0.00 0.00 0.00 2.90
698 5462 2.125773 AGTCGATGGAACGTCTACCT 57.874 50.000 0.00 0.00 31.15 3.08
699 5463 3.562973 TCATAGTCGATGGAACGTCTACC 59.437 47.826 0.00 0.00 36.95 3.18
701 5465 5.823209 TTTCATAGTCGATGGAACGTCTA 57.177 39.130 0.00 0.00 37.98 2.59
713 5477 4.990257 TCCCTACGTCTTTTTCATAGTCG 58.010 43.478 0.00 0.00 0.00 4.18
719 5483 4.884668 ACTCATCCCTACGTCTTTTTCA 57.115 40.909 0.00 0.00 0.00 2.69
723 5487 6.929606 GCATATAAACTCATCCCTACGTCTTT 59.070 38.462 0.00 0.00 0.00 2.52
727 5491 6.420913 AAGCATATAAACTCATCCCTACGT 57.579 37.500 0.00 0.00 0.00 3.57
741 5604 9.788960 GACTCACGATGATACATAAGCATATAA 57.211 33.333 0.00 0.00 0.00 0.98
745 5608 6.155136 CAGACTCACGATGATACATAAGCAT 58.845 40.000 0.00 0.00 0.00 3.79
747 5610 5.524284 ACAGACTCACGATGATACATAAGC 58.476 41.667 0.00 0.00 0.00 3.09
749 5612 7.282450 ACAGTACAGACTCACGATGATACATAA 59.718 37.037 0.00 0.00 31.73 1.90
754 5617 4.941873 ACACAGTACAGACTCACGATGATA 59.058 41.667 0.00 0.00 31.73 2.15
755 5618 3.759086 ACACAGTACAGACTCACGATGAT 59.241 43.478 0.00 0.00 31.73 2.45
757 5620 3.560902 ACACAGTACAGACTCACGATG 57.439 47.619 0.00 0.00 31.73 3.84
758 5621 5.001874 TCTAACACAGTACAGACTCACGAT 58.998 41.667 0.00 0.00 31.73 3.73
759 5622 4.383173 TCTAACACAGTACAGACTCACGA 58.617 43.478 0.00 0.00 31.73 4.35
760 5623 4.744136 TCTAACACAGTACAGACTCACG 57.256 45.455 0.00 0.00 31.73 4.35
761 5624 7.766219 TTTTTCTAACACAGTACAGACTCAC 57.234 36.000 0.00 0.00 31.73 3.51
786 5649 3.055675 TGGATTACGGATCAGGACGTTTT 60.056 43.478 0.10 0.00 43.79 2.43
957 6063 4.404098 GGCGGGATCCACGTGGTT 62.404 66.667 32.74 25.67 36.34 3.67
1346 9445 4.373116 GTGGAAGGTCGGCTGCGA 62.373 66.667 0.00 0.00 0.00 5.10
1540 9640 2.603776 AAGGTCCGGGCGAAGTCT 60.604 61.111 0.00 0.00 0.00 3.24
1727 9828 1.135094 CATATCTCCACAGGCAGGGT 58.865 55.000 0.00 0.00 0.00 4.34
2030 10131 1.277495 CGTTGGTACACGAACCGTCC 61.277 60.000 0.00 0.00 42.91 4.79
2079 10180 5.587844 GCATTATTAGGAGATCGCCATTCAT 59.412 40.000 18.44 6.17 0.00 2.57
2087 10188 8.394877 CAGTAGAGTAGCATTATTAGGAGATCG 58.605 40.741 0.00 0.00 0.00 3.69
2099 10200 5.967088 ACATCGAAACAGTAGAGTAGCATT 58.033 37.500 0.00 0.00 0.00 3.56
2100 10201 5.584253 ACATCGAAACAGTAGAGTAGCAT 57.416 39.130 0.00 0.00 0.00 3.79
2102 10203 5.642686 AGAACATCGAAACAGTAGAGTAGC 58.357 41.667 0.00 0.00 0.00 3.58
2105 10206 5.707242 TGAGAACATCGAAACAGTAGAGT 57.293 39.130 0.00 0.00 0.00 3.24
2106 10207 6.153067 AGTTGAGAACATCGAAACAGTAGAG 58.847 40.000 0.00 0.00 0.00 2.43
2126 10240 3.447586 TCTCGGACCCTTATCAGAAGTTG 59.552 47.826 0.00 0.00 0.00 3.16
2205 10325 6.484643 CACCTATACATCCAACCAGAAATGAG 59.515 42.308 0.00 0.00 0.00 2.90
2311 10432 3.191581 TGTCTGAGACGAATGAGAACCTC 59.808 47.826 8.23 0.00 34.95 3.85
2330 10451 4.098416 GCGCCTTCAATGATTTAGTTGTC 58.902 43.478 0.00 0.00 0.00 3.18
2332 10453 3.853671 GTGCGCCTTCAATGATTTAGTTG 59.146 43.478 4.18 0.00 0.00 3.16
2334 10455 2.095853 CGTGCGCCTTCAATGATTTAGT 59.904 45.455 4.18 0.00 0.00 2.24
2335 10456 2.095853 ACGTGCGCCTTCAATGATTTAG 59.904 45.455 4.18 0.00 0.00 1.85
2336 10457 2.080693 ACGTGCGCCTTCAATGATTTA 58.919 42.857 4.18 0.00 0.00 1.40
2337 10458 0.881118 ACGTGCGCCTTCAATGATTT 59.119 45.000 4.18 0.00 0.00 2.17
2338 10459 0.881118 AACGTGCGCCTTCAATGATT 59.119 45.000 4.18 0.00 0.00 2.57
2339 10460 0.168788 CAACGTGCGCCTTCAATGAT 59.831 50.000 4.18 0.00 0.00 2.45
2340 10461 1.163420 ACAACGTGCGCCTTCAATGA 61.163 50.000 4.18 0.00 0.00 2.57
2343 10464 2.876879 CGACAACGTGCGCCTTCAA 61.877 57.895 4.18 0.00 34.56 2.69
2344 10465 3.334751 CGACAACGTGCGCCTTCA 61.335 61.111 4.18 0.00 34.56 3.02
2345 10466 4.719616 GCGACAACGTGCGCCTTC 62.720 66.667 16.75 0.00 46.93 3.46
2359 10480 3.223710 TAAAAGTGGACGGGCGCGA 62.224 57.895 30.98 4.24 0.00 5.87
2361 10482 2.865308 GTAAAAGTGGACGGGCGC 59.135 61.111 0.00 0.00 0.00 6.53
2362 10483 0.738412 ATCGTAAAAGTGGACGGGCG 60.738 55.000 0.00 0.00 39.53 6.13
2363 10484 0.725117 CATCGTAAAAGTGGACGGGC 59.275 55.000 0.00 0.00 39.53 6.13
2364 10485 2.373540 TCATCGTAAAAGTGGACGGG 57.626 50.000 0.00 0.00 39.53 5.28
2365 10486 4.436852 CCATTTCATCGTAAAAGTGGACGG 60.437 45.833 0.00 0.00 39.53 4.79
2366 10487 4.153475 ACCATTTCATCGTAAAAGTGGACG 59.847 41.667 12.28 0.00 40.43 4.79
2367 10488 5.622770 ACCATTTCATCGTAAAAGTGGAC 57.377 39.130 12.28 0.00 0.00 4.02
2368 10489 6.469410 ACTACCATTTCATCGTAAAAGTGGA 58.531 36.000 12.28 0.00 0.00 4.02
2369 10490 6.737254 ACTACCATTTCATCGTAAAAGTGG 57.263 37.500 6.47 6.47 0.00 4.00
2377 10498 7.960738 CGTTGAAAAATACTACCATTTCATCGT 59.039 33.333 16.34 0.00 43.23 3.73
2378 10499 8.172484 TCGTTGAAAAATACTACCATTTCATCG 58.828 33.333 17.60 17.60 46.16 3.84
2379 10500 9.490663 CTCGTTGAAAAATACTACCATTTCATC 57.509 33.333 0.00 0.00 40.36 2.92
2380 10501 8.458843 CCTCGTTGAAAAATACTACCATTTCAT 58.541 33.333 0.00 0.00 40.36 2.57
2381 10502 7.662258 TCCTCGTTGAAAAATACTACCATTTCA 59.338 33.333 0.00 0.00 39.33 2.69
2382 10503 8.036273 TCCTCGTTGAAAAATACTACCATTTC 57.964 34.615 0.00 0.00 33.48 2.17
2383 10504 7.989416 TCCTCGTTGAAAAATACTACCATTT 57.011 32.000 0.00 0.00 0.00 2.32
2384 10505 7.989416 TTCCTCGTTGAAAAATACTACCATT 57.011 32.000 0.00 0.00 0.00 3.16
2385 10506 7.989416 TTTCCTCGTTGAAAAATACTACCAT 57.011 32.000 0.70 0.00 31.56 3.55
2386 10507 7.804843 TTTTCCTCGTTGAAAAATACTACCA 57.195 32.000 10.81 0.00 40.31 3.25
2394 10515 4.707934 ACCCTCTTTTTCCTCGTTGAAAAA 59.292 37.500 19.09 19.09 46.47 1.94
2395 10516 4.097286 CACCCTCTTTTTCCTCGTTGAAAA 59.903 41.667 9.65 9.65 41.23 2.29
2396 10517 3.630312 CACCCTCTTTTTCCTCGTTGAAA 59.370 43.478 0.00 0.00 32.60 2.69
2397 10518 3.211045 CACCCTCTTTTTCCTCGTTGAA 58.789 45.455 0.00 0.00 0.00 2.69
2398 10519 2.486548 CCACCCTCTTTTTCCTCGTTGA 60.487 50.000 0.00 0.00 0.00 3.18
2399 10520 1.880027 CCACCCTCTTTTTCCTCGTTG 59.120 52.381 0.00 0.00 0.00 4.10
2400 10521 1.493446 ACCACCCTCTTTTTCCTCGTT 59.507 47.619 0.00 0.00 0.00 3.85
2401 10522 1.137697 ACCACCCTCTTTTTCCTCGT 58.862 50.000 0.00 0.00 0.00 4.18
2402 10523 3.629142 ATACCACCCTCTTTTTCCTCG 57.371 47.619 0.00 0.00 0.00 4.63
2403 10524 6.063496 ACTAATACCACCCTCTTTTTCCTC 57.937 41.667 0.00 0.00 0.00 3.71
2404 10525 7.578458 TTACTAATACCACCCTCTTTTTCCT 57.422 36.000 0.00 0.00 0.00 3.36
2405 10526 7.284716 CCATTACTAATACCACCCTCTTTTTCC 59.715 40.741 0.00 0.00 0.00 3.13
2406 10527 8.050930 TCCATTACTAATACCACCCTCTTTTTC 58.949 37.037 0.00 0.00 0.00 2.29
2407 10528 7.832685 GTCCATTACTAATACCACCCTCTTTTT 59.167 37.037 0.00 0.00 0.00 1.94
2408 10529 7.184022 AGTCCATTACTAATACCACCCTCTTTT 59.816 37.037 0.00 0.00 36.36 2.27
2409 10530 6.677076 AGTCCATTACTAATACCACCCTCTTT 59.323 38.462 0.00 0.00 36.36 2.52
2410 10531 6.210522 AGTCCATTACTAATACCACCCTCTT 58.789 40.000 0.00 0.00 36.36 2.85
2411 10532 5.789535 AGTCCATTACTAATACCACCCTCT 58.210 41.667 0.00 0.00 36.36 3.69
2412 10533 5.601313 TGAGTCCATTACTAATACCACCCTC 59.399 44.000 0.00 0.00 39.07 4.30
2413 10534 5.365895 GTGAGTCCATTACTAATACCACCCT 59.634 44.000 0.00 0.00 39.07 4.34
2414 10535 5.129815 TGTGAGTCCATTACTAATACCACCC 59.870 44.000 0.00 0.00 39.07 4.61
2415 10536 6.229936 TGTGAGTCCATTACTAATACCACC 57.770 41.667 0.00 0.00 39.07 4.61
2416 10537 7.272978 ACATGTGAGTCCATTACTAATACCAC 58.727 38.462 0.00 0.00 39.07 4.16
2417 10538 7.125053 TGACATGTGAGTCCATTACTAATACCA 59.875 37.037 1.15 0.00 39.07 3.25
2418 10539 7.497595 TGACATGTGAGTCCATTACTAATACC 58.502 38.462 1.15 0.00 39.07 2.73
2419 10540 7.653713 CCTGACATGTGAGTCCATTACTAATAC 59.346 40.741 11.54 0.00 39.07 1.89
2420 10541 7.344612 ACCTGACATGTGAGTCCATTACTAATA 59.655 37.037 11.54 0.00 39.07 0.98
2421 10542 6.156949 ACCTGACATGTGAGTCCATTACTAAT 59.843 38.462 11.54 0.00 39.07 1.73
2422 10543 5.483937 ACCTGACATGTGAGTCCATTACTAA 59.516 40.000 11.54 0.00 39.07 2.24
2423 10544 5.023452 ACCTGACATGTGAGTCCATTACTA 58.977 41.667 11.54 0.00 39.07 1.82
2424 10545 3.840666 ACCTGACATGTGAGTCCATTACT 59.159 43.478 11.54 0.00 42.80 2.24
2425 10546 4.207891 ACCTGACATGTGAGTCCATTAC 57.792 45.455 11.54 0.00 37.73 1.89
2426 10547 4.908601 AACCTGACATGTGAGTCCATTA 57.091 40.909 11.54 0.00 37.73 1.90
2427 10548 3.795688 AACCTGACATGTGAGTCCATT 57.204 42.857 11.54 0.00 37.73 3.16
2428 10549 3.795688 AAACCTGACATGTGAGTCCAT 57.204 42.857 11.54 0.00 37.73 3.41
2429 10550 3.576078 AAAACCTGACATGTGAGTCCA 57.424 42.857 11.54 0.00 37.73 4.02
2430 10551 5.063880 ACTAAAAACCTGACATGTGAGTCC 58.936 41.667 11.54 0.00 37.73 3.85
2431 10552 6.619801 AACTAAAAACCTGACATGTGAGTC 57.380 37.500 11.54 0.00 38.99 3.36
2432 10553 7.122055 TGAAAACTAAAAACCTGACATGTGAGT 59.878 33.333 11.54 0.00 0.00 3.41
2433 10554 7.479980 TGAAAACTAAAAACCTGACATGTGAG 58.520 34.615 1.15 3.49 0.00 3.51
2434 10555 7.338196 TCTGAAAACTAAAAACCTGACATGTGA 59.662 33.333 1.15 0.00 0.00 3.58
2435 10556 7.479980 TCTGAAAACTAAAAACCTGACATGTG 58.520 34.615 1.15 0.00 0.00 3.21
2436 10557 7.639113 TCTGAAAACTAAAAACCTGACATGT 57.361 32.000 0.00 0.00 0.00 3.21
2437 10558 8.925161 TTTCTGAAAACTAAAAACCTGACATG 57.075 30.769 0.00 0.00 0.00 3.21
2438 10559 9.533253 CATTTCTGAAAACTAAAAACCTGACAT 57.467 29.630 6.95 0.00 0.00 3.06
2439 10560 7.978975 CCATTTCTGAAAACTAAAAACCTGACA 59.021 33.333 6.95 0.00 0.00 3.58
2440 10561 8.194769 TCCATTTCTGAAAACTAAAAACCTGAC 58.805 33.333 6.95 0.00 0.00 3.51
2441 10562 8.299990 TCCATTTCTGAAAACTAAAAACCTGA 57.700 30.769 6.95 0.00 0.00 3.86
2442 10563 8.940768 TTCCATTTCTGAAAACTAAAAACCTG 57.059 30.769 6.95 0.00 0.00 4.00
2443 10564 8.977412 TCTTCCATTTCTGAAAACTAAAAACCT 58.023 29.630 6.95 0.00 0.00 3.50
2444 10565 9.031360 GTCTTCCATTTCTGAAAACTAAAAACC 57.969 33.333 6.95 0.00 0.00 3.27
2445 10566 9.803315 AGTCTTCCATTTCTGAAAACTAAAAAC 57.197 29.630 6.95 1.72 0.00 2.43
2451 10572 8.980481 TTCTAAGTCTTCCATTTCTGAAAACT 57.020 30.769 6.95 2.24 0.00 2.66
2452 10573 9.057089 TCTTCTAAGTCTTCCATTTCTGAAAAC 57.943 33.333 6.95 0.00 0.00 2.43
2453 10574 9.799106 ATCTTCTAAGTCTTCCATTTCTGAAAA 57.201 29.630 6.95 0.00 0.00 2.29
2454 10575 9.799106 AATCTTCTAAGTCTTCCATTTCTGAAA 57.201 29.630 5.15 5.15 0.00 2.69
2480 10601 9.710900 CATGTGAGTCCATTACTAATGCTTATA 57.289 33.333 3.52 0.00 39.07 0.98
2481 10602 7.173907 GCATGTGAGTCCATTACTAATGCTTAT 59.826 37.037 3.52 0.00 41.71 1.73
2482 10603 6.483307 GCATGTGAGTCCATTACTAATGCTTA 59.517 38.462 3.52 0.00 41.71 3.09
2483 10604 5.297776 GCATGTGAGTCCATTACTAATGCTT 59.702 40.000 3.52 0.00 41.71 3.91
2484 10605 4.818546 GCATGTGAGTCCATTACTAATGCT 59.181 41.667 3.52 0.00 41.71 3.79
2485 10606 4.023707 GGCATGTGAGTCCATTACTAATGC 60.024 45.833 3.52 9.65 42.92 3.56
2486 10607 5.371526 AGGCATGTGAGTCCATTACTAATG 58.628 41.667 2.17 2.17 39.07 1.90
2487 10608 5.455326 GGAGGCATGTGAGTCCATTACTAAT 60.455 44.000 0.00 0.00 39.07 1.73
2488 10609 4.141711 GGAGGCATGTGAGTCCATTACTAA 60.142 45.833 0.00 0.00 39.07 2.24
2489 10610 3.388024 GGAGGCATGTGAGTCCATTACTA 59.612 47.826 0.00 0.00 39.07 1.82
2490 10611 2.171448 GGAGGCATGTGAGTCCATTACT 59.829 50.000 0.00 0.00 42.80 2.24
2491 10612 2.092968 TGGAGGCATGTGAGTCCATTAC 60.093 50.000 0.00 0.00 34.03 1.89
2492 10613 2.092968 GTGGAGGCATGTGAGTCCATTA 60.093 50.000 9.68 0.00 41.14 1.90
2493 10614 0.994247 TGGAGGCATGTGAGTCCATT 59.006 50.000 0.00 0.00 34.03 3.16
2494 10615 0.254178 GTGGAGGCATGTGAGTCCAT 59.746 55.000 9.68 0.00 41.14 3.41
2495 10616 1.679311 GTGGAGGCATGTGAGTCCA 59.321 57.895 0.00 0.00 36.72 4.02
2496 10617 1.448540 CGTGGAGGCATGTGAGTCC 60.449 63.158 0.00 0.00 0.00 3.85
2497 10618 2.103042 GCGTGGAGGCATGTGAGTC 61.103 63.158 0.00 0.00 0.00 3.36
2498 10619 1.257750 TAGCGTGGAGGCATGTGAGT 61.258 55.000 0.00 0.00 34.64 3.41
2499 10620 0.807667 GTAGCGTGGAGGCATGTGAG 60.808 60.000 0.00 0.00 34.64 3.51
2500 10621 1.218047 GTAGCGTGGAGGCATGTGA 59.782 57.895 0.00 0.00 34.64 3.58
2501 10622 0.673333 TTGTAGCGTGGAGGCATGTG 60.673 55.000 0.00 0.00 34.64 3.21
2502 10623 0.673644 GTTGTAGCGTGGAGGCATGT 60.674 55.000 0.00 0.00 34.64 3.21
2503 10624 1.695893 CGTTGTAGCGTGGAGGCATG 61.696 60.000 0.00 0.00 34.64 4.06
2504 10625 1.447838 CGTTGTAGCGTGGAGGCAT 60.448 57.895 0.00 0.00 34.64 4.40
2505 10626 2.048597 CGTTGTAGCGTGGAGGCA 60.049 61.111 0.00 0.00 34.64 4.75
2506 10627 2.813908 CCGTTGTAGCGTGGAGGC 60.814 66.667 0.00 0.00 0.00 4.70
2507 10628 2.813908 GCCGTTGTAGCGTGGAGG 60.814 66.667 0.00 0.00 0.00 4.30
2508 10629 1.421410 GATGCCGTTGTAGCGTGGAG 61.421 60.000 0.00 0.00 0.00 3.86
2509 10630 1.447140 GATGCCGTTGTAGCGTGGA 60.447 57.895 0.00 0.00 0.00 4.02
2510 10631 2.461110 GGATGCCGTTGTAGCGTGG 61.461 63.158 0.00 0.00 0.00 4.94
2511 10632 1.447838 AGGATGCCGTTGTAGCGTG 60.448 57.895 0.00 0.00 0.00 5.34
2512 10633 1.447838 CAGGATGCCGTTGTAGCGT 60.448 57.895 0.00 0.00 0.00 5.07
2513 10634 1.153647 TCAGGATGCCGTTGTAGCG 60.154 57.895 0.00 0.00 34.76 4.26
2514 10635 1.090052 GGTCAGGATGCCGTTGTAGC 61.090 60.000 0.00 0.00 34.76 3.58
2515 10636 0.462047 GGGTCAGGATGCCGTTGTAG 60.462 60.000 0.00 0.00 33.85 2.74
2516 10637 0.907704 AGGGTCAGGATGCCGTTGTA 60.908 55.000 0.00 0.00 33.85 2.41
2517 10638 2.224159 AGGGTCAGGATGCCGTTGT 61.224 57.895 0.00 0.00 33.85 3.32
2518 10639 1.746615 CAGGGTCAGGATGCCGTTG 60.747 63.158 0.00 0.00 33.85 4.10
2519 10640 2.671070 CAGGGTCAGGATGCCGTT 59.329 61.111 0.00 0.00 33.85 4.44
2520 10641 4.101448 GCAGGGTCAGGATGCCGT 62.101 66.667 0.00 0.00 33.85 5.68
2534 10655 0.671781 CAACTCCAGGAACTCCGCAG 60.672 60.000 0.00 0.00 42.08 5.18
2535 10656 1.118965 TCAACTCCAGGAACTCCGCA 61.119 55.000 0.00 0.00 42.08 5.69
2536 10657 0.390472 CTCAACTCCAGGAACTCCGC 60.390 60.000 0.00 0.00 42.08 5.54
2537 10658 0.390472 GCTCAACTCCAGGAACTCCG 60.390 60.000 0.00 0.00 42.08 4.63
2538 10659 0.687354 TGCTCAACTCCAGGAACTCC 59.313 55.000 0.00 0.00 34.60 3.85
2539 10660 2.626840 GATGCTCAACTCCAGGAACTC 58.373 52.381 0.00 0.00 34.60 3.01
2540 10661 1.066573 CGATGCTCAACTCCAGGAACT 60.067 52.381 0.00 0.00 43.88 3.01
2541 10662 1.066858 TCGATGCTCAACTCCAGGAAC 60.067 52.381 0.00 0.00 0.00 3.62
2542 10663 1.205655 CTCGATGCTCAACTCCAGGAA 59.794 52.381 0.00 0.00 0.00 3.36
2543 10664 0.820226 CTCGATGCTCAACTCCAGGA 59.180 55.000 0.00 0.00 0.00 3.86
2544 10665 0.179089 CCTCGATGCTCAACTCCAGG 60.179 60.000 0.00 0.00 0.00 4.45
2545 10666 0.809241 GCCTCGATGCTCAACTCCAG 60.809 60.000 5.34 0.00 0.00 3.86
2546 10667 1.219124 GCCTCGATGCTCAACTCCA 59.781 57.895 5.34 0.00 0.00 3.86
2547 10668 1.880340 CGCCTCGATGCTCAACTCC 60.880 63.158 11.00 0.00 0.00 3.85
2548 10669 1.880340 CCGCCTCGATGCTCAACTC 60.880 63.158 11.00 0.00 0.00 3.01
2549 10670 2.185350 CCGCCTCGATGCTCAACT 59.815 61.111 11.00 0.00 0.00 3.16
2550 10671 3.567797 GCCGCCTCGATGCTCAAC 61.568 66.667 11.00 0.00 0.00 3.18
2551 10672 4.838152 GGCCGCCTCGATGCTCAA 62.838 66.667 11.00 0.00 0.00 3.02
2553 10674 4.838152 TTGGCCGCCTCGATGCTC 62.838 66.667 11.61 2.63 0.00 4.26
2566 10687 2.464459 CCTTCTCATCGCCGTTGGC 61.464 63.158 0.00 0.00 46.75 4.52
2567 10688 1.815421 CCCTTCTCATCGCCGTTGG 60.815 63.158 0.00 0.00 0.00 3.77
2568 10689 2.464459 GCCCTTCTCATCGCCGTTG 61.464 63.158 0.00 0.00 0.00 4.10
2569 10690 2.125106 GCCCTTCTCATCGCCGTT 60.125 61.111 0.00 0.00 0.00 4.44
2570 10691 2.735772 ATGCCCTTCTCATCGCCGT 61.736 57.895 0.00 0.00 0.00 5.68
2571 10692 2.109799 ATGCCCTTCTCATCGCCG 59.890 61.111 0.00 0.00 0.00 6.46
2572 10693 1.895707 CCATGCCCTTCTCATCGCC 60.896 63.158 0.00 0.00 0.00 5.54
2573 10694 2.550101 GCCATGCCCTTCTCATCGC 61.550 63.158 0.00 0.00 0.00 4.58
2574 10695 0.749091 TTGCCATGCCCTTCTCATCG 60.749 55.000 0.00 0.00 0.00 3.84
2575 10696 1.135721 GTTTGCCATGCCCTTCTCATC 59.864 52.381 0.00 0.00 0.00 2.92
2576 10697 1.188863 GTTTGCCATGCCCTTCTCAT 58.811 50.000 0.00 0.00 0.00 2.90
2577 10698 0.112995 AGTTTGCCATGCCCTTCTCA 59.887 50.000 0.00 0.00 0.00 3.27
2578 10699 0.529378 CAGTTTGCCATGCCCTTCTC 59.471 55.000 0.00 0.00 0.00 2.87
2579 10700 0.901580 CCAGTTTGCCATGCCCTTCT 60.902 55.000 0.00 0.00 0.00 2.85
2580 10701 1.187567 ACCAGTTTGCCATGCCCTTC 61.188 55.000 0.00 0.00 0.00 3.46
2581 10702 0.763986 AACCAGTTTGCCATGCCCTT 60.764 50.000 0.00 0.00 0.00 3.95
2582 10703 0.763986 AAACCAGTTTGCCATGCCCT 60.764 50.000 0.00 0.00 0.00 5.19
2583 10704 0.108396 AAAACCAGTTTGCCATGCCC 59.892 50.000 0.00 0.00 32.36 5.36
2584 10705 1.511850 GAAAACCAGTTTGCCATGCC 58.488 50.000 0.00 0.00 32.36 4.40
2585 10706 1.511850 GGAAAACCAGTTTGCCATGC 58.488 50.000 14.40 0.00 45.69 4.06
2589 10710 1.877680 GCCATGGAAAACCAGTTTGCC 60.878 52.381 18.40 12.69 46.41 4.52
2590 10711 1.511850 GCCATGGAAAACCAGTTTGC 58.488 50.000 18.40 0.00 38.01 3.68
2591 10712 1.270785 GGGCCATGGAAAACCAGTTTG 60.271 52.381 18.40 0.00 32.36 2.93
2592 10713 1.055849 GGGCCATGGAAAACCAGTTT 58.944 50.000 18.40 0.00 0.00 2.66
2593 10714 0.190815 AGGGCCATGGAAAACCAGTT 59.809 50.000 18.40 0.00 0.00 3.16
2594 10715 0.251787 GAGGGCCATGGAAAACCAGT 60.252 55.000 18.40 0.00 0.00 4.00
2595 10716 0.251742 TGAGGGCCATGGAAAACCAG 60.252 55.000 18.40 0.00 0.00 4.00
2596 10717 0.189574 TTGAGGGCCATGGAAAACCA 59.810 50.000 18.40 2.92 0.00 3.67
2597 10718 0.897621 CTTGAGGGCCATGGAAAACC 59.102 55.000 18.40 11.47 0.00 3.27
2598 10719 0.897621 CCTTGAGGGCCATGGAAAAC 59.102 55.000 18.40 4.17 41.31 2.43
2599 10720 0.783206 TCCTTGAGGGCCATGGAAAA 59.217 50.000 18.40 0.30 43.61 2.29
2600 10721 0.039618 GTCCTTGAGGGCCATGGAAA 59.960 55.000 18.40 0.00 46.67 3.13
2601 10722 1.691219 GTCCTTGAGGGCCATGGAA 59.309 57.895 18.40 0.00 46.67 3.53
2602 10723 2.669133 CGTCCTTGAGGGCCATGGA 61.669 63.158 18.40 4.39 44.15 3.41
2603 10724 2.124570 CGTCCTTGAGGGCCATGG 60.125 66.667 7.63 7.63 40.44 3.66
2604 10725 2.124570 CCGTCCTTGAGGGCCATG 60.125 66.667 6.18 0.00 36.14 3.66
2625 10746 2.932130 GATTGAGGAGCCACGAGCCC 62.932 65.000 0.00 0.00 45.47 5.19
2626 10747 1.522580 GATTGAGGAGCCACGAGCC 60.523 63.158 0.00 0.00 45.47 4.70
2627 10748 0.107945 AAGATTGAGGAGCCACGAGC 60.108 55.000 0.00 0.00 44.25 5.03
2628 10749 1.472376 GGAAGATTGAGGAGCCACGAG 60.472 57.143 0.00 0.00 0.00 4.18
2629 10750 0.537188 GGAAGATTGAGGAGCCACGA 59.463 55.000 0.00 0.00 0.00 4.35
2630 10751 0.539051 AGGAAGATTGAGGAGCCACG 59.461 55.000 0.00 0.00 0.00 4.94
2631 10752 4.133078 CAATAGGAAGATTGAGGAGCCAC 58.867 47.826 0.00 0.00 38.83 5.01
2632 10753 3.137176 CCAATAGGAAGATTGAGGAGCCA 59.863 47.826 0.00 0.00 38.83 4.75
2633 10754 3.497584 CCCAATAGGAAGATTGAGGAGCC 60.498 52.174 0.00 0.00 38.83 4.70
2634 10755 3.137360 ACCCAATAGGAAGATTGAGGAGC 59.863 47.826 9.31 0.00 38.83 4.70
2635 10756 4.410228 TGACCCAATAGGAAGATTGAGGAG 59.590 45.833 9.31 0.00 38.83 3.69
2636 10757 4.370776 TGACCCAATAGGAAGATTGAGGA 58.629 43.478 9.31 0.00 38.83 3.71
2637 10758 4.164988 ACTGACCCAATAGGAAGATTGAGG 59.835 45.833 0.00 1.17 38.83 3.86
2638 10759 5.104776 TCACTGACCCAATAGGAAGATTGAG 60.105 44.000 0.00 0.00 38.83 3.02
2639 10760 4.782691 TCACTGACCCAATAGGAAGATTGA 59.217 41.667 0.00 0.00 38.83 2.57
2640 10761 5.102953 TCACTGACCCAATAGGAAGATTG 57.897 43.478 0.00 0.00 39.89 2.67
2641 10762 4.164988 CCTCACTGACCCAATAGGAAGATT 59.835 45.833 0.00 0.00 39.89 2.40
2642 10763 3.713764 CCTCACTGACCCAATAGGAAGAT 59.286 47.826 0.00 0.00 39.89 2.40
2643 10764 3.107601 CCTCACTGACCCAATAGGAAGA 58.892 50.000 0.00 0.00 39.89 2.87
2644 10765 2.171448 CCCTCACTGACCCAATAGGAAG 59.829 54.545 0.00 0.00 39.89 3.46
2645 10766 2.196595 CCCTCACTGACCCAATAGGAA 58.803 52.381 0.00 0.00 39.89 3.36
2646 10767 1.364678 TCCCTCACTGACCCAATAGGA 59.635 52.381 0.00 0.00 39.89 2.94
2647 10768 1.765314 CTCCCTCACTGACCCAATAGG 59.235 57.143 0.00 0.00 43.78 2.57
2648 10769 2.432510 GACTCCCTCACTGACCCAATAG 59.567 54.545 0.00 0.00 0.00 1.73
2649 10770 2.467880 GACTCCCTCACTGACCCAATA 58.532 52.381 0.00 0.00 0.00 1.90
2650 10771 1.280457 GACTCCCTCACTGACCCAAT 58.720 55.000 0.00 0.00 0.00 3.16
2651 10772 0.836400 GGACTCCCTCACTGACCCAA 60.836 60.000 0.00 0.00 0.00 4.12
2652 10773 1.229209 GGACTCCCTCACTGACCCA 60.229 63.158 0.00 0.00 0.00 4.51
2653 10774 1.079438 AGGACTCCCTCACTGACCC 59.921 63.158 0.00 0.00 38.86 4.46
2654 10775 1.261238 CCAGGACTCCCTCACTGACC 61.261 65.000 0.00 0.00 42.02 4.02
2655 10776 0.251832 TCCAGGACTCCCTCACTGAC 60.252 60.000 0.00 0.00 42.02 3.51
2656 10777 0.712979 ATCCAGGACTCCCTCACTGA 59.287 55.000 0.00 0.00 42.02 3.41
2657 10778 1.577736 AATCCAGGACTCCCTCACTG 58.422 55.000 0.00 0.00 42.02 3.66
2658 10779 3.039252 CTAATCCAGGACTCCCTCACT 57.961 52.381 0.00 0.00 42.02 3.41
2920 11050 4.080129 TCGTAGAGGCTAAACCCTAGAAGA 60.080 45.833 0.00 0.00 40.58 2.87
3028 11158 1.883926 ACAATGTTTACCCAGGTTCGC 59.116 47.619 0.00 0.00 0.00 4.70
3079 12769 2.227089 GAGGTCCCGATCTGTGCGTT 62.227 60.000 0.00 0.00 0.00 4.84
3097 13169 1.074423 CGGCGGATCTAGGGTAGGA 59.926 63.158 0.00 0.00 0.00 2.94
3105 13177 0.609151 TGTCAAAACCGGCGGATCTA 59.391 50.000 35.78 10.88 0.00 1.98


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.