Multiple sequence alignment - TraesCS3B01G149100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G149100 chr3B 100.000 5280 0 0 1 5280 140486193 140491472 0.000000e+00 9751.0
1 TraesCS3B01G149100 chr3B 83.142 261 28 6 4958 5208 659818436 659818690 1.910000e-54 224.0
2 TraesCS3B01G149100 chr3B 82.609 230 28 6 4990 5208 592667336 592667564 5.400000e-45 193.0
3 TraesCS3B01G149100 chr3D 96.566 2126 58 5 1380 3500 90825608 90827723 0.000000e+00 3507.0
4 TraesCS3B01G149100 chr3D 89.773 1408 76 37 3484 4850 90827742 90829122 0.000000e+00 1740.0
5 TraesCS3B01G149100 chr3D 87.300 1378 95 42 32 1379 90824200 90825527 0.000000e+00 1502.0
6 TraesCS3B01G149100 chr3A 97.127 1984 57 0 1517 3500 107077067 107079050 0.000000e+00 3349.0
7 TraesCS3B01G149100 chr3A 88.125 1381 78 43 54 1396 107075733 107077065 0.000000e+00 1563.0
8 TraesCS3B01G149100 chr3A 94.377 907 32 6 3765 4664 107079417 107080311 0.000000e+00 1375.0
9 TraesCS3B01G149100 chr3A 86.879 282 16 11 4679 4957 107080845 107081108 4.000000e-76 296.0
10 TraesCS3B01G149100 chr7B 89.771 919 56 15 624 1538 420659007 420659891 0.000000e+00 1142.0
11 TraesCS3B01G149100 chr7B 89.468 921 58 13 622 1538 420612824 420613709 0.000000e+00 1127.0
12 TraesCS3B01G149100 chr7B 88.943 615 28 12 928 1538 124646741 124647319 0.000000e+00 723.0
13 TraesCS3B01G149100 chr7B 78.632 351 44 11 4956 5280 580662425 580662770 2.490000e-48 204.0
14 TraesCS3B01G149100 chr6B 89.577 921 57 12 622 1538 53342352 53343237 0.000000e+00 1133.0
15 TraesCS3B01G149100 chr6B 87.079 178 12 7 4955 5129 10454161 10454330 1.940000e-44 191.0
16 TraesCS3B01G149100 chr6B 79.851 134 17 4 5085 5208 572500612 572500479 7.280000e-14 89.8
17 TraesCS3B01G149100 chr6A 90.090 888 58 16 622 1504 243299720 243300582 0.000000e+00 1125.0
18 TraesCS3B01G149100 chr2A 89.262 922 50 23 622 1538 33779369 33778492 0.000000e+00 1109.0
19 TraesCS3B01G149100 chr2A 78.947 228 38 3 4990 5207 568323488 568323715 4.260000e-31 147.0
20 TraesCS3B01G149100 chr2A 80.473 169 23 5 5050 5208 733813972 733813804 2.580000e-23 121.0
21 TraesCS3B01G149100 chr4B 91.071 616 28 9 928 1539 187543644 187543052 0.000000e+00 808.0
22 TraesCS3B01G149100 chr4B 76.497 451 91 12 3839 4280 660355318 660355762 1.140000e-56 231.0
23 TraesCS3B01G149100 chr1A 89.466 655 31 13 888 1538 14978343 14978963 0.000000e+00 793.0
24 TraesCS3B01G149100 chr1A 90.535 243 11 9 622 863 14978113 14978344 1.430000e-80 311.0
25 TraesCS3B01G149100 chr5B 90.081 615 35 8 928 1538 593374604 593375196 0.000000e+00 774.0
26 TraesCS3B01G149100 chr5B 85.864 191 13 8 4990 5169 572400432 572400245 1.940000e-44 191.0
27 TraesCS3B01G149100 chr5B 79.008 262 37 8 4958 5208 611993773 611994027 4.230000e-36 163.0
28 TraesCS3B01G149100 chr1B 83.775 302 26 4 4992 5270 354506310 354506611 1.130000e-66 265.0
29 TraesCS3B01G149100 chr1D 81.194 335 33 6 4956 5265 258408970 258408641 5.280000e-60 243.0
30 TraesCS3B01G149100 chr1D 81.166 223 32 3 4995 5207 484433201 484432979 2.530000e-38 171.0
31 TraesCS3B01G149100 chr7D 84.279 229 26 2 4990 5208 611862866 611862638 1.150000e-51 215.0
32 TraesCS3B01G149100 chr7D 70.874 515 135 14 2956 3461 625597864 625597356 7.230000e-19 106.0
33 TraesCS3B01G149100 chr5D 82.443 262 29 8 4957 5208 1594745 1594491 4.140000e-51 213.0
34 TraesCS3B01G149100 chr2D 82.558 258 30 7 4961 5208 551154859 551154607 4.140000e-51 213.0
35 TraesCS3B01G149100 chr6D 82.301 226 28 6 4992 5207 417771440 417771663 9.030000e-43 185.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G149100 chr3B 140486193 140491472 5279 False 9751.000000 9751 100.0000 1 5280 1 chr3B.!!$F1 5279
1 TraesCS3B01G149100 chr3D 90824200 90829122 4922 False 2249.666667 3507 91.2130 32 4850 3 chr3D.!!$F1 4818
2 TraesCS3B01G149100 chr3A 107075733 107081108 5375 False 1645.750000 3349 91.6270 54 4957 4 chr3A.!!$F1 4903
3 TraesCS3B01G149100 chr7B 420659007 420659891 884 False 1142.000000 1142 89.7710 624 1538 1 chr7B.!!$F3 914
4 TraesCS3B01G149100 chr7B 420612824 420613709 885 False 1127.000000 1127 89.4680 622 1538 1 chr7B.!!$F2 916
5 TraesCS3B01G149100 chr7B 124646741 124647319 578 False 723.000000 723 88.9430 928 1538 1 chr7B.!!$F1 610
6 TraesCS3B01G149100 chr6B 53342352 53343237 885 False 1133.000000 1133 89.5770 622 1538 1 chr6B.!!$F2 916
7 TraesCS3B01G149100 chr6A 243299720 243300582 862 False 1125.000000 1125 90.0900 622 1504 1 chr6A.!!$F1 882
8 TraesCS3B01G149100 chr2A 33778492 33779369 877 True 1109.000000 1109 89.2620 622 1538 1 chr2A.!!$R1 916
9 TraesCS3B01G149100 chr4B 187543052 187543644 592 True 808.000000 808 91.0710 928 1539 1 chr4B.!!$R1 611
10 TraesCS3B01G149100 chr1A 14978113 14978963 850 False 552.000000 793 90.0005 622 1538 2 chr1A.!!$F1 916
11 TraesCS3B01G149100 chr5B 593374604 593375196 592 False 774.000000 774 90.0810 928 1538 1 chr5B.!!$F1 610

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
230 240 0.250814 CGGAGTACGGATAGCTCCCT 60.251 60.0 0.00 0.0 44.32 4.20 F
584 632 0.537653 GTGGTGGTAAGCCTCTCTCC 59.462 60.0 0.00 0.0 35.27 3.71 F
1264 1333 0.696501 AAATGGTGCGGTTAGGGAGT 59.303 50.0 0.00 0.0 0.00 3.85 F
2489 2664 0.523072 GTGTTGACGATGCATTGCCT 59.477 50.0 14.18 0.0 0.00 4.75 F
3209 3384 0.247460 TTCCCGAGAGTGCATCTGTG 59.753 55.0 0.00 0.0 38.84 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2060 2235 0.583438 CATAGTTCTTGCCATCCGCG 59.417 55.0 0.00 0.0 42.08 6.46 R
2255 2430 0.314302 CTAGCATAAGGACCCGGACG 59.686 60.0 0.73 0.0 0.00 4.79 R
3209 3384 0.108945 GCCAGTCCAGAATTGCTTGC 60.109 55.0 0.00 0.0 0.00 4.01 R
3404 3579 0.041833 ACCTCCTAGCCTCTTGAGCA 59.958 55.0 0.00 0.0 0.00 4.26 R
5131 5959 0.032678 GGATGGATCAGCGACGACAT 59.967 55.0 0.00 0.0 0.00 3.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 0.980423 AGAACTTCTCCTCCCAGTGC 59.020 55.000 0.00 0.00 0.00 4.40
21 22 0.390472 GAACTTCTCCTCCCAGTGCG 60.390 60.000 0.00 0.00 0.00 5.34
22 23 1.831652 AACTTCTCCTCCCAGTGCGG 61.832 60.000 0.00 0.00 0.00 5.69
31 32 2.350895 CCAGTGCGGGAACATCCA 59.649 61.111 0.00 0.00 38.64 3.41
32 33 1.077501 CCAGTGCGGGAACATCCAT 60.078 57.895 0.00 0.00 38.64 3.41
33 34 1.378882 CCAGTGCGGGAACATCCATG 61.379 60.000 0.00 0.00 38.64 3.66
34 35 0.392863 CAGTGCGGGAACATCCATGA 60.393 55.000 0.00 0.00 38.64 3.07
35 36 0.327924 AGTGCGGGAACATCCATGAA 59.672 50.000 0.00 0.00 38.64 2.57
36 37 1.173043 GTGCGGGAACATCCATGAAA 58.827 50.000 0.00 0.00 38.64 2.69
37 38 1.543802 GTGCGGGAACATCCATGAAAA 59.456 47.619 0.00 0.00 38.64 2.29
38 39 2.029470 GTGCGGGAACATCCATGAAAAA 60.029 45.455 0.00 0.00 38.64 1.94
39 40 2.230992 TGCGGGAACATCCATGAAAAAG 59.769 45.455 0.00 0.00 38.64 2.27
40 41 2.879826 CGGGAACATCCATGAAAAAGC 58.120 47.619 0.00 0.00 38.64 3.51
41 42 2.493278 CGGGAACATCCATGAAAAAGCT 59.507 45.455 0.00 0.00 38.64 3.74
42 43 3.674138 CGGGAACATCCATGAAAAAGCTG 60.674 47.826 0.00 0.00 38.64 4.24
43 44 3.511146 GGGAACATCCATGAAAAAGCTGA 59.489 43.478 0.00 0.00 38.64 4.26
44 45 4.021192 GGGAACATCCATGAAAAAGCTGAA 60.021 41.667 0.00 0.00 38.64 3.02
45 46 5.337813 GGGAACATCCATGAAAAAGCTGAAT 60.338 40.000 0.00 0.00 38.64 2.57
48 49 7.818930 GGAACATCCATGAAAAAGCTGAATAAA 59.181 33.333 0.00 0.00 36.28 1.40
51 52 9.374838 ACATCCATGAAAAAGCTGAATAAATTC 57.625 29.630 0.00 0.00 37.31 2.17
84 86 3.133003 AGATCTGATACTCAAACCGGTGG 59.867 47.826 8.52 3.46 0.00 4.61
230 240 0.250814 CGGAGTACGGATAGCTCCCT 60.251 60.000 0.00 0.00 44.32 4.20
231 241 1.002888 CGGAGTACGGATAGCTCCCTA 59.997 57.143 0.00 0.00 44.32 3.53
269 280 8.786898 TCGATCCCATTCTTAATTGATTGATTC 58.213 33.333 0.00 0.00 0.00 2.52
374 386 2.288886 CGCCCCTCTAGCCAAACTATAC 60.289 54.545 0.00 0.00 0.00 1.47
382 394 7.235812 CCCTCTAGCCAAACTATACTAGGAAAT 59.764 40.741 0.00 0.00 34.24 2.17
383 395 8.091449 CCTCTAGCCAAACTATACTAGGAAATG 58.909 40.741 0.00 0.00 34.24 2.32
384 396 8.777578 TCTAGCCAAACTATACTAGGAAATGA 57.222 34.615 0.00 0.00 34.24 2.57
390 402 8.903820 CCAAACTATACTAGGAAATGAAAAGGG 58.096 37.037 0.00 0.00 0.00 3.95
471 495 3.431068 CGTCTAGAGACTCTACAGCTCCA 60.431 52.174 8.17 0.00 42.66 3.86
472 496 4.127171 GTCTAGAGACTCTACAGCTCCAG 58.873 52.174 8.17 0.00 41.65 3.86
473 497 4.034410 TCTAGAGACTCTACAGCTCCAGA 58.966 47.826 8.17 0.92 0.00 3.86
474 498 2.999331 AGAGACTCTACAGCTCCAGAC 58.001 52.381 2.19 0.00 0.00 3.51
475 499 2.021457 GAGACTCTACAGCTCCAGACC 58.979 57.143 0.00 0.00 0.00 3.85
476 500 1.638589 AGACTCTACAGCTCCAGACCT 59.361 52.381 0.00 0.00 0.00 3.85
477 501 2.021457 GACTCTACAGCTCCAGACCTC 58.979 57.143 0.00 0.00 0.00 3.85
478 502 1.341581 ACTCTACAGCTCCAGACCTCC 60.342 57.143 0.00 0.00 0.00 4.30
519 543 2.444895 GATCTGCCTCCCTCCCGT 60.445 66.667 0.00 0.00 0.00 5.28
529 557 2.362632 CCTCCCGTTCGTCTCCCT 60.363 66.667 0.00 0.00 0.00 4.20
530 558 2.416432 CCTCCCGTTCGTCTCCCTC 61.416 68.421 0.00 0.00 0.00 4.30
531 559 1.378778 CTCCCGTTCGTCTCCCTCT 60.379 63.158 0.00 0.00 0.00 3.69
532 560 0.966370 CTCCCGTTCGTCTCCCTCTT 60.966 60.000 0.00 0.00 0.00 2.85
584 632 0.537653 GTGGTGGTAAGCCTCTCTCC 59.462 60.000 0.00 0.00 35.27 3.71
591 639 1.133853 GTAAGCCTCTCTCCCCGACTA 60.134 57.143 0.00 0.00 0.00 2.59
597 645 2.124983 TCTCCCCGACTACGACCG 60.125 66.667 0.00 0.00 42.66 4.79
598 646 3.885521 CTCCCCGACTACGACCGC 61.886 72.222 0.00 0.00 42.66 5.68
604 652 3.525545 GACTACGACCGCCCCCTC 61.526 72.222 0.00 0.00 0.00 4.30
606 654 2.194056 CTACGACCGCCCCCTCTA 59.806 66.667 0.00 0.00 0.00 2.43
611 659 1.154221 GACCGCCCCCTCTATCTCT 59.846 63.158 0.00 0.00 0.00 3.10
615 663 0.965439 CGCCCCCTCTATCTCTCTTG 59.035 60.000 0.00 0.00 0.00 3.02
617 665 1.761009 GCCCCCTCTATCTCTCTTGCT 60.761 57.143 0.00 0.00 0.00 3.91
713 761 2.434774 GGTTTCGCTTCCCCCACT 59.565 61.111 0.00 0.00 0.00 4.00
952 1005 3.982241 GGTTGTGTGCAGGCAGGC 61.982 66.667 0.00 0.00 0.00 4.85
1121 1187 2.563471 CGCAAGGTACTCCTACAGTC 57.437 55.000 0.00 0.00 44.35 3.51
1122 1188 1.134560 CGCAAGGTACTCCTACAGTCC 59.865 57.143 0.00 0.00 44.35 3.85
1264 1333 0.696501 AAATGGTGCGGTTAGGGAGT 59.303 50.000 0.00 0.00 0.00 3.85
1367 1457 2.421739 CTTATGCCGGCGCCTACT 59.578 61.111 26.68 8.90 0.00 2.57
1378 1548 3.427233 CCGGCGCCTACTATAGTTGATAC 60.427 52.174 26.68 1.85 0.00 2.24
1465 1640 1.879380 TGAATTGTTTGCCTGGACTCG 59.121 47.619 0.00 0.00 0.00 4.18
1503 1678 4.434725 CGATGTGTGTTTCTGTAGTCATGC 60.435 45.833 0.00 0.00 0.00 4.06
1504 1679 2.799978 TGTGTGTTTCTGTAGTCATGCG 59.200 45.455 0.00 0.00 0.00 4.73
1552 1727 7.584108 TCATGTTCTAACACAGCAAGTTTATG 58.416 34.615 0.00 0.00 42.51 1.90
1586 1761 1.004394 GAGGGGATTGAGGAAACCGTT 59.996 52.381 0.00 0.00 0.00 4.44
1601 1776 1.591327 CGTTGGTGTTGGCAAAGGC 60.591 57.895 0.00 0.00 40.13 4.35
1670 1845 1.681780 CGTACCAGGATGTTGGGCAAT 60.682 52.381 0.00 0.00 42.76 3.56
1859 2034 4.583907 TGGCTTGAAATCTGTGATGACAAA 59.416 37.500 0.00 0.00 0.00 2.83
2054 2229 4.884164 CCAGACAACTTTATCCCCAAGATC 59.116 45.833 0.00 0.00 36.33 2.75
2060 2235 1.056660 TTATCCCCAAGATCCCGCTC 58.943 55.000 0.00 0.00 36.33 5.03
2399 2574 0.834687 TTCTGTGCCCTCGTAACCCT 60.835 55.000 0.00 0.00 0.00 4.34
2489 2664 0.523072 GTGTTGACGATGCATTGCCT 59.477 50.000 14.18 0.00 0.00 4.75
2834 3009 1.065854 GTCATGTTCCCAGAGGACAGG 60.066 57.143 0.00 0.00 43.90 4.00
3023 3198 5.814705 GGACTTCATCTACATTGAGAACCAG 59.185 44.000 0.00 0.00 0.00 4.00
3140 3315 7.164122 TGAAGATTGTCAGTAAGATTGAAGCT 58.836 34.615 0.00 0.00 0.00 3.74
3143 3318 3.338249 TGTCAGTAAGATTGAAGCTGGC 58.662 45.455 0.00 0.00 32.97 4.85
3188 3363 2.765969 CCAATGTGGCCTGAGGGT 59.234 61.111 3.32 0.00 34.45 4.34
3189 3364 1.679977 CCAATGTGGCCTGAGGGTG 60.680 63.158 3.32 0.00 34.45 4.61
3191 3366 0.540365 CAATGTGGCCTGAGGGTGTT 60.540 55.000 3.32 0.00 34.45 3.32
3209 3384 0.247460 TTCCCGAGAGTGCATCTGTG 59.753 55.000 0.00 0.00 38.84 3.66
3338 3513 1.481871 TCTTCTGCCTAGGTAACCGG 58.518 55.000 11.31 0.00 37.17 5.28
3377 3552 2.091885 GGAATATGAACCCCAGGAGCAA 60.092 50.000 0.00 0.00 0.00 3.91
3404 3579 3.285484 ACCTGATACTGATTACGTCCGT 58.715 45.455 0.00 0.00 0.00 4.69
3486 3661 5.221661 CCTTCAGTTCTACTTAACCTGTGGT 60.222 44.000 0.00 0.00 37.65 4.16
3493 3668 5.001232 TCTACTTAACCTGTGGTTTGCATC 58.999 41.667 7.32 0.00 44.33 3.91
3496 3671 4.218417 ACTTAACCTGTGGTTTGCATCATC 59.782 41.667 7.32 0.00 44.33 2.92
3500 3675 3.642848 ACCTGTGGTTTGCATCATCTTTT 59.357 39.130 0.00 0.00 27.29 2.27
3501 3676 4.101430 ACCTGTGGTTTGCATCATCTTTTT 59.899 37.500 0.00 0.00 27.29 1.94
3560 3776 4.603989 TGTTTGCATGTGTTCATCCATT 57.396 36.364 0.00 0.00 31.15 3.16
3561 3777 4.958509 TGTTTGCATGTGTTCATCCATTT 58.041 34.783 0.00 0.00 31.15 2.32
3568 3784 5.064198 GCATGTGTTCATCCATTTTTCCATG 59.936 40.000 0.00 0.00 31.15 3.66
3569 3785 5.149973 TGTGTTCATCCATTTTTCCATGG 57.850 39.130 4.97 4.97 44.80 3.66
3571 3787 5.777223 TGTGTTCATCCATTTTTCCATGGTA 59.223 36.000 12.58 0.00 43.94 3.25
3617 3834 6.641169 ACTCAAATTCAGTTTCCTTCCTTC 57.359 37.500 0.00 0.00 0.00 3.46
3627 3844 6.000219 CAGTTTCCTTCCTTCAAAGATCAGA 59.000 40.000 0.00 0.00 0.00 3.27
3651 3868 7.444487 AGACAGAGGCTTAAGTTTTTAATTCGT 59.556 33.333 4.02 0.00 0.00 3.85
3754 4001 6.310467 TCCTGATTCGTCTCTTAAAATCAACG 59.690 38.462 0.00 0.00 37.60 4.10
3794 4086 4.889409 ACATTGTTCTCTTGTGTGGATTGT 59.111 37.500 0.00 0.00 0.00 2.71
3811 4103 7.880160 TGGATTGTAAGGATCCAGTTATTTG 57.120 36.000 15.82 0.00 46.11 2.32
3820 4112 2.170166 TCCAGTTATTTGGCCAAGCTG 58.830 47.619 19.48 21.84 38.16 4.24
3904 4196 0.476771 ACCAAAGGTCAATGGACGGT 59.523 50.000 0.00 0.00 45.28 4.83
3967 4259 0.621571 ATCTAGCCAACAGGGAGCCA 60.622 55.000 0.00 0.00 40.01 4.75
4536 4831 3.548415 CGCTCGTACCTACTTGGATCTTC 60.548 52.174 0.00 0.00 39.71 2.87
4693 5509 9.330063 TCTACCATTTCTATAGTGCAAGATTTG 57.670 33.333 0.00 0.00 0.00 2.32
4703 5520 5.505173 AGTGCAAGATTTGTGCCATATAC 57.495 39.130 0.00 0.00 41.49 1.47
4732 5549 2.543848 TGACGAGTTGTTTGTGATGAGC 59.456 45.455 0.00 0.00 0.00 4.26
4735 5552 2.663879 CGAGTTGTTTGTGATGAGCTGC 60.664 50.000 0.00 0.00 0.00 5.25
4782 5599 4.401519 ACGAGAAGATTATGAAACGGAGGA 59.598 41.667 0.00 0.00 0.00 3.71
4784 5601 5.810587 CGAGAAGATTATGAAACGGAGGAAA 59.189 40.000 0.00 0.00 0.00 3.13
4785 5602 6.237861 CGAGAAGATTATGAAACGGAGGAAAC 60.238 42.308 0.00 0.00 0.00 2.78
4786 5603 5.581085 AGAAGATTATGAAACGGAGGAAACG 59.419 40.000 0.00 0.00 37.36 3.60
4787 5604 5.080969 AGATTATGAAACGGAGGAAACGA 57.919 39.130 0.00 0.00 34.93 3.85
4788 5605 5.484715 AGATTATGAAACGGAGGAAACGAA 58.515 37.500 0.00 0.00 34.93 3.85
4789 5606 5.581085 AGATTATGAAACGGAGGAAACGAAG 59.419 40.000 0.00 0.00 34.93 3.79
4790 5607 1.873698 TGAAACGGAGGAAACGAAGG 58.126 50.000 0.00 0.00 34.93 3.46
4791 5608 1.154197 GAAACGGAGGAAACGAAGGG 58.846 55.000 0.00 0.00 34.93 3.95
4792 5609 0.760572 AAACGGAGGAAACGAAGGGA 59.239 50.000 0.00 0.00 34.93 4.20
4793 5610 0.320697 AACGGAGGAAACGAAGGGAG 59.679 55.000 0.00 0.00 34.93 4.30
4794 5611 0.830866 ACGGAGGAAACGAAGGGAGT 60.831 55.000 0.00 0.00 34.93 3.85
4795 5612 1.180029 CGGAGGAAACGAAGGGAGTA 58.820 55.000 0.00 0.00 0.00 2.59
4905 5732 6.570672 TCTCTACATACGGTATCCACATTC 57.429 41.667 0.00 0.00 0.00 2.67
4926 5753 6.877611 TTCTTTTCCCATGTTGAGTCTAAC 57.122 37.500 0.00 0.00 0.00 2.34
4957 5785 7.918076 TCTACCTGTTCCACAAGAGATAATTT 58.082 34.615 0.00 0.00 0.00 1.82
4958 5786 8.383175 TCTACCTGTTCCACAAGAGATAATTTT 58.617 33.333 0.00 0.00 0.00 1.82
4959 5787 7.454260 ACCTGTTCCACAAGAGATAATTTTC 57.546 36.000 0.00 0.00 0.00 2.29
4960 5788 7.234355 ACCTGTTCCACAAGAGATAATTTTCT 58.766 34.615 0.00 0.00 0.00 2.52
4961 5789 7.725844 ACCTGTTCCACAAGAGATAATTTTCTT 59.274 33.333 0.00 0.00 34.09 2.52
4962 5790 8.579863 CCTGTTCCACAAGAGATAATTTTCTTT 58.420 33.333 0.00 0.00 31.53 2.52
4963 5791 9.971922 CTGTTCCACAAGAGATAATTTTCTTTT 57.028 29.630 0.00 0.00 31.53 2.27
4984 5812 4.746535 TTTGAAAAAGGAGGTTGAACCC 57.253 40.909 11.41 2.41 39.75 4.11
4985 5813 2.673258 TGAAAAAGGAGGTTGAACCCC 58.327 47.619 11.41 11.94 39.75 4.95
4986 5814 1.968493 GAAAAAGGAGGTTGAACCCCC 59.032 52.381 11.41 9.12 39.75 5.40
4987 5815 1.241485 AAAAGGAGGTTGAACCCCCT 58.759 50.000 12.14 12.14 39.75 4.79
4988 5816 0.482887 AAAGGAGGTTGAACCCCCTG 59.517 55.000 18.77 0.00 39.75 4.45
4989 5817 2.035783 GGAGGTTGAACCCCCTGC 59.964 66.667 11.41 0.00 39.75 4.85
4990 5818 2.035783 GAGGTTGAACCCCCTGCC 59.964 66.667 11.41 0.00 39.75 4.85
4991 5819 3.585525 GAGGTTGAACCCCCTGCCC 62.586 68.421 11.41 0.00 39.75 5.36
4992 5820 4.696805 GGTTGAACCCCCTGCCCC 62.697 72.222 2.08 0.00 30.04 5.80
5006 5834 4.559063 CCCCGGCCTCTGCATCAG 62.559 72.222 0.00 0.00 40.13 2.90
5007 5835 3.790437 CCCGGCCTCTGCATCAGT 61.790 66.667 0.00 0.00 40.13 3.41
5008 5836 2.270205 CCGGCCTCTGCATCAGTT 59.730 61.111 0.00 0.00 40.13 3.16
5009 5837 2.110967 CCGGCCTCTGCATCAGTTG 61.111 63.158 0.00 0.00 40.13 3.16
5010 5838 1.078918 CGGCCTCTGCATCAGTTGA 60.079 57.895 0.00 0.00 40.13 3.18
5011 5839 0.463295 CGGCCTCTGCATCAGTTGAT 60.463 55.000 0.00 0.00 40.13 2.57
5022 5850 4.968812 CATCAGTTGATGCATACAACCA 57.031 40.909 25.33 17.99 45.70 3.67
5023 5851 5.509716 CATCAGTTGATGCATACAACCAT 57.490 39.130 25.33 18.90 45.70 3.55
5024 5852 5.516996 CATCAGTTGATGCATACAACCATC 58.483 41.667 25.33 10.28 45.70 3.51
5025 5853 4.847198 TCAGTTGATGCATACAACCATCT 58.153 39.130 25.33 11.90 45.70 2.90
5026 5854 5.255687 TCAGTTGATGCATACAACCATCTT 58.744 37.500 25.33 12.83 45.70 2.40
5027 5855 5.711506 TCAGTTGATGCATACAACCATCTTT 59.288 36.000 25.33 12.35 45.70 2.52
5028 5856 6.883756 TCAGTTGATGCATACAACCATCTTTA 59.116 34.615 25.33 10.52 45.70 1.85
5029 5857 7.557358 TCAGTTGATGCATACAACCATCTTTAT 59.443 33.333 25.33 11.38 45.70 1.40
5030 5858 8.192774 CAGTTGATGCATACAACCATCTTTATT 58.807 33.333 25.33 10.91 45.70 1.40
5031 5859 9.407380 AGTTGATGCATACAACCATCTTTATTA 57.593 29.630 25.33 0.00 45.70 0.98
5056 5884 8.463930 AATTATTCAACAAAGACCTGACAAGA 57.536 30.769 0.00 0.00 0.00 3.02
5057 5885 7.873719 TTATTCAACAAAGACCTGACAAGAA 57.126 32.000 0.00 0.00 0.00 2.52
5058 5886 6.966534 ATTCAACAAAGACCTGACAAGAAT 57.033 33.333 0.00 0.00 0.00 2.40
5059 5887 9.567776 TTATTCAACAAAGACCTGACAAGAATA 57.432 29.630 0.00 0.00 0.00 1.75
5060 5888 8.641498 ATTCAACAAAGACCTGACAAGAATAT 57.359 30.769 0.00 0.00 0.00 1.28
5061 5889 9.739276 ATTCAACAAAGACCTGACAAGAATATA 57.261 29.630 0.00 0.00 0.00 0.86
5062 5890 8.547967 TCAACAAAGACCTGACAAGAATATAC 57.452 34.615 0.00 0.00 0.00 1.47
5063 5891 8.154203 TCAACAAAGACCTGACAAGAATATACA 58.846 33.333 0.00 0.00 0.00 2.29
5064 5892 8.950210 CAACAAAGACCTGACAAGAATATACAT 58.050 33.333 0.00 0.00 0.00 2.29
5065 5893 8.723942 ACAAAGACCTGACAAGAATATACATC 57.276 34.615 0.00 0.00 0.00 3.06
5066 5894 8.321353 ACAAAGACCTGACAAGAATATACATCA 58.679 33.333 0.00 0.00 0.00 3.07
5067 5895 9.166173 CAAAGACCTGACAAGAATATACATCAA 57.834 33.333 0.00 0.00 0.00 2.57
5068 5896 8.954950 AAGACCTGACAAGAATATACATCAAG 57.045 34.615 0.00 0.00 0.00 3.02
5069 5897 6.989169 AGACCTGACAAGAATATACATCAAGC 59.011 38.462 0.00 0.00 0.00 4.01
5070 5898 6.893583 ACCTGACAAGAATATACATCAAGCT 58.106 36.000 0.00 0.00 0.00 3.74
5071 5899 8.023021 ACCTGACAAGAATATACATCAAGCTA 57.977 34.615 0.00 0.00 0.00 3.32
5072 5900 7.928706 ACCTGACAAGAATATACATCAAGCTAC 59.071 37.037 0.00 0.00 0.00 3.58
5073 5901 7.386299 CCTGACAAGAATATACATCAAGCTACC 59.614 40.741 0.00 0.00 0.00 3.18
5074 5902 7.217200 TGACAAGAATATACATCAAGCTACCC 58.783 38.462 0.00 0.00 0.00 3.69
5075 5903 6.223852 ACAAGAATATACATCAAGCTACCCG 58.776 40.000 0.00 0.00 0.00 5.28
5076 5904 6.041637 ACAAGAATATACATCAAGCTACCCGA 59.958 38.462 0.00 0.00 0.00 5.14
5077 5905 6.665992 AGAATATACATCAAGCTACCCGAA 57.334 37.500 0.00 0.00 0.00 4.30
5078 5906 6.692486 AGAATATACATCAAGCTACCCGAAG 58.308 40.000 0.00 0.00 0.00 3.79
5079 5907 2.596904 TACATCAAGCTACCCGAAGC 57.403 50.000 0.00 0.00 43.11 3.86
5080 5908 0.107654 ACATCAAGCTACCCGAAGCC 60.108 55.000 0.00 0.00 43.86 4.35
5081 5909 0.107703 CATCAAGCTACCCGAAGCCA 60.108 55.000 0.00 0.00 43.86 4.75
5082 5910 0.839946 ATCAAGCTACCCGAAGCCAT 59.160 50.000 0.00 0.00 43.86 4.40
5083 5911 0.178068 TCAAGCTACCCGAAGCCATC 59.822 55.000 0.00 0.00 43.86 3.51
5084 5912 0.107703 CAAGCTACCCGAAGCCATCA 60.108 55.000 0.00 0.00 43.86 3.07
5085 5913 0.107654 AAGCTACCCGAAGCCATCAC 60.108 55.000 0.00 0.00 43.86 3.06
5086 5914 0.978146 AGCTACCCGAAGCCATCACT 60.978 55.000 0.00 0.00 43.86 3.41
5087 5915 0.530870 GCTACCCGAAGCCATCACTC 60.531 60.000 0.00 0.00 36.45 3.51
5088 5916 0.824109 CTACCCGAAGCCATCACTCA 59.176 55.000 0.00 0.00 0.00 3.41
5089 5917 0.535335 TACCCGAAGCCATCACTCAC 59.465 55.000 0.00 0.00 0.00 3.51
5090 5918 1.296392 CCCGAAGCCATCACTCACA 59.704 57.895 0.00 0.00 0.00 3.58
5091 5919 1.021390 CCCGAAGCCATCACTCACAC 61.021 60.000 0.00 0.00 0.00 3.82
5092 5920 1.021390 CCGAAGCCATCACTCACACC 61.021 60.000 0.00 0.00 0.00 4.16
5093 5921 0.036952 CGAAGCCATCACTCACACCT 60.037 55.000 0.00 0.00 0.00 4.00
5094 5922 1.204704 CGAAGCCATCACTCACACCTA 59.795 52.381 0.00 0.00 0.00 3.08
5095 5923 2.622436 GAAGCCATCACTCACACCTAC 58.378 52.381 0.00 0.00 0.00 3.18
5096 5924 1.644509 AGCCATCACTCACACCTACA 58.355 50.000 0.00 0.00 0.00 2.74
5097 5925 1.977854 AGCCATCACTCACACCTACAA 59.022 47.619 0.00 0.00 0.00 2.41
5098 5926 2.371841 AGCCATCACTCACACCTACAAA 59.628 45.455 0.00 0.00 0.00 2.83
5099 5927 2.484264 GCCATCACTCACACCTACAAAC 59.516 50.000 0.00 0.00 0.00 2.93
5100 5928 3.807209 GCCATCACTCACACCTACAAACT 60.807 47.826 0.00 0.00 0.00 2.66
5101 5929 3.997021 CCATCACTCACACCTACAAACTC 59.003 47.826 0.00 0.00 0.00 3.01
5102 5930 3.364889 TCACTCACACCTACAAACTCG 57.635 47.619 0.00 0.00 0.00 4.18
5103 5931 2.953648 TCACTCACACCTACAAACTCGA 59.046 45.455 0.00 0.00 0.00 4.04
5104 5932 3.572682 TCACTCACACCTACAAACTCGAT 59.427 43.478 0.00 0.00 0.00 3.59
5105 5933 4.763279 TCACTCACACCTACAAACTCGATA 59.237 41.667 0.00 0.00 0.00 2.92
5106 5934 5.242171 TCACTCACACCTACAAACTCGATAA 59.758 40.000 0.00 0.00 0.00 1.75
5107 5935 6.071560 TCACTCACACCTACAAACTCGATAAT 60.072 38.462 0.00 0.00 0.00 1.28
5108 5936 6.035005 CACTCACACCTACAAACTCGATAATG 59.965 42.308 0.00 0.00 0.00 1.90
5109 5937 6.071560 ACTCACACCTACAAACTCGATAATGA 60.072 38.462 0.00 0.00 0.00 2.57
5110 5938 6.330278 TCACACCTACAAACTCGATAATGAG 58.670 40.000 0.00 0.00 41.86 2.90
5125 5953 3.765968 TGAGTACTCTCACTGCCCA 57.234 52.632 23.01 0.00 44.58 5.36
5126 5954 2.238084 TGAGTACTCTCACTGCCCAT 57.762 50.000 23.01 0.00 44.58 4.00
5127 5955 3.382083 TGAGTACTCTCACTGCCCATA 57.618 47.619 23.01 0.00 44.58 2.74
5128 5956 3.916035 TGAGTACTCTCACTGCCCATAT 58.084 45.455 23.01 0.00 44.58 1.78
5129 5957 3.891977 TGAGTACTCTCACTGCCCATATC 59.108 47.826 23.01 0.00 44.58 1.63
5130 5958 2.887783 AGTACTCTCACTGCCCATATCG 59.112 50.000 0.00 0.00 0.00 2.92
5131 5959 2.073252 ACTCTCACTGCCCATATCGA 57.927 50.000 0.00 0.00 0.00 3.59
5132 5960 2.603021 ACTCTCACTGCCCATATCGAT 58.397 47.619 2.16 2.16 0.00 3.59
5133 5961 2.298446 ACTCTCACTGCCCATATCGATG 59.702 50.000 8.54 0.00 0.00 3.84
5134 5962 2.298446 CTCTCACTGCCCATATCGATGT 59.702 50.000 8.54 0.00 0.00 3.06
5135 5963 2.297315 TCTCACTGCCCATATCGATGTC 59.703 50.000 8.54 0.00 0.00 3.06
5136 5964 1.000274 TCACTGCCCATATCGATGTCG 60.000 52.381 8.54 0.00 41.45 4.35
5137 5965 1.040646 ACTGCCCATATCGATGTCGT 58.959 50.000 8.54 0.00 40.80 4.34
5138 5966 1.000163 ACTGCCCATATCGATGTCGTC 60.000 52.381 8.54 0.00 40.80 4.20
5146 5974 3.909312 CGATGTCGTCGCTGATCC 58.091 61.111 0.67 0.00 44.33 3.36
5147 5975 1.064134 CGATGTCGTCGCTGATCCA 59.936 57.895 0.67 0.00 44.33 3.41
5148 5976 0.318191 CGATGTCGTCGCTGATCCAT 60.318 55.000 0.67 0.00 44.33 3.41
5149 5977 1.413382 GATGTCGTCGCTGATCCATC 58.587 55.000 0.00 0.00 0.00 3.51
5150 5978 0.032678 ATGTCGTCGCTGATCCATCC 59.967 55.000 0.00 0.00 0.00 3.51
5151 5979 1.319614 TGTCGTCGCTGATCCATCCA 61.320 55.000 0.00 0.00 0.00 3.41
5152 5980 0.872021 GTCGTCGCTGATCCATCCAC 60.872 60.000 0.00 0.00 0.00 4.02
5153 5981 1.141665 CGTCGCTGATCCATCCACA 59.858 57.895 0.00 0.00 0.00 4.17
5154 5982 0.249615 CGTCGCTGATCCATCCACAT 60.250 55.000 0.00 0.00 0.00 3.21
5155 5983 1.000274 CGTCGCTGATCCATCCACATA 60.000 52.381 0.00 0.00 0.00 2.29
5156 5984 2.681706 GTCGCTGATCCATCCACATAG 58.318 52.381 0.00 0.00 0.00 2.23
5157 5985 1.001293 TCGCTGATCCATCCACATAGC 59.999 52.381 0.00 0.00 0.00 2.97
5158 5986 1.270465 CGCTGATCCATCCACATAGCA 60.270 52.381 0.00 0.00 0.00 3.49
5159 5987 2.614734 CGCTGATCCATCCACATAGCAT 60.615 50.000 0.00 0.00 0.00 3.79
5160 5988 3.368739 CGCTGATCCATCCACATAGCATA 60.369 47.826 0.00 0.00 0.00 3.14
5161 5989 4.682589 CGCTGATCCATCCACATAGCATAT 60.683 45.833 0.00 0.00 0.00 1.78
5162 5990 4.815308 GCTGATCCATCCACATAGCATATC 59.185 45.833 0.00 0.00 0.00 1.63
5163 5991 5.014808 TGATCCATCCACATAGCATATCG 57.985 43.478 0.00 0.00 0.00 2.92
5164 5992 3.893326 TCCATCCACATAGCATATCGG 57.107 47.619 0.00 0.00 0.00 4.18
5165 5993 3.173151 TCCATCCACATAGCATATCGGT 58.827 45.455 0.00 0.00 0.00 4.69
5166 5994 4.349365 TCCATCCACATAGCATATCGGTA 58.651 43.478 0.00 0.00 0.00 4.02
5167 5995 4.159693 TCCATCCACATAGCATATCGGTAC 59.840 45.833 0.00 0.00 0.00 3.34
5168 5996 4.433615 CATCCACATAGCATATCGGTACC 58.566 47.826 0.16 0.16 0.00 3.34
5169 5997 3.774734 TCCACATAGCATATCGGTACCT 58.225 45.455 10.90 0.00 0.00 3.08
5170 5998 4.925836 TCCACATAGCATATCGGTACCTA 58.074 43.478 10.90 0.00 0.00 3.08
5171 5999 4.703575 TCCACATAGCATATCGGTACCTAC 59.296 45.833 10.90 0.00 0.00 3.18
5172 6000 4.461431 CCACATAGCATATCGGTACCTACA 59.539 45.833 10.90 0.00 0.00 2.74
5173 6001 5.393135 CCACATAGCATATCGGTACCTACAG 60.393 48.000 10.90 0.00 0.00 2.74
5174 6002 5.183331 CACATAGCATATCGGTACCTACAGT 59.817 44.000 10.90 0.00 0.00 3.55
5175 6003 5.415077 ACATAGCATATCGGTACCTACAGTC 59.585 44.000 10.90 0.00 0.00 3.51
5176 6004 2.812591 AGCATATCGGTACCTACAGTCG 59.187 50.000 10.90 0.00 0.00 4.18
5177 6005 2.095364 GCATATCGGTACCTACAGTCGG 60.095 54.545 10.90 0.00 0.00 4.79
5178 6006 3.144506 CATATCGGTACCTACAGTCGGT 58.855 50.000 10.90 1.72 38.55 4.69
5179 6007 1.386533 ATCGGTACCTACAGTCGGTG 58.613 55.000 10.90 0.00 35.98 4.94
5180 6008 1.138247 CGGTACCTACAGTCGGTGC 59.862 63.158 10.90 5.42 35.98 5.01
5181 6009 1.588824 CGGTACCTACAGTCGGTGCA 61.589 60.000 10.90 0.00 38.68 4.57
5182 6010 0.172803 GGTACCTACAGTCGGTGCAG 59.827 60.000 13.39 0.00 38.68 4.41
5183 6011 0.458025 GTACCTACAGTCGGTGCAGC 60.458 60.000 5.64 5.64 37.15 5.25
5184 6012 0.896479 TACCTACAGTCGGTGCAGCA 60.896 55.000 17.33 0.00 35.98 4.41
5185 6013 1.005037 CCTACAGTCGGTGCAGCAA 60.005 57.895 17.33 0.00 0.00 3.91
5186 6014 0.602638 CCTACAGTCGGTGCAGCAAA 60.603 55.000 17.33 0.00 0.00 3.68
5187 6015 0.512952 CTACAGTCGGTGCAGCAAAC 59.487 55.000 17.33 13.08 0.00 2.93
5188 6016 0.882927 TACAGTCGGTGCAGCAAACC 60.883 55.000 17.33 0.00 0.00 3.27
5189 6017 1.893808 CAGTCGGTGCAGCAAACCT 60.894 57.895 17.33 2.31 35.39 3.50
5190 6018 0.602638 CAGTCGGTGCAGCAAACCTA 60.603 55.000 17.33 0.00 35.39 3.08
5191 6019 0.107831 AGTCGGTGCAGCAAACCTAA 59.892 50.000 17.33 0.00 35.39 2.69
5192 6020 0.948678 GTCGGTGCAGCAAACCTAAA 59.051 50.000 17.33 0.00 35.39 1.85
5193 6021 1.069227 GTCGGTGCAGCAAACCTAAAG 60.069 52.381 17.33 0.00 35.39 1.85
5194 6022 0.387239 CGGTGCAGCAAACCTAAAGC 60.387 55.000 17.33 0.00 35.39 3.51
5195 6023 0.387239 GGTGCAGCAAACCTAAAGCG 60.387 55.000 11.86 0.00 34.66 4.68
5196 6024 0.310854 GTGCAGCAAACCTAAAGCGT 59.689 50.000 0.00 0.00 0.00 5.07
5197 6025 1.533731 GTGCAGCAAACCTAAAGCGTA 59.466 47.619 0.00 0.00 0.00 4.42
5198 6026 1.533731 TGCAGCAAACCTAAAGCGTAC 59.466 47.619 0.00 0.00 0.00 3.67
5199 6027 1.533731 GCAGCAAACCTAAAGCGTACA 59.466 47.619 0.00 0.00 0.00 2.90
5200 6028 2.161609 GCAGCAAACCTAAAGCGTACAT 59.838 45.455 0.00 0.00 0.00 2.29
5201 6029 3.727970 GCAGCAAACCTAAAGCGTACATC 60.728 47.826 0.00 0.00 0.00 3.06
5202 6030 3.435327 CAGCAAACCTAAAGCGTACATCA 59.565 43.478 0.00 0.00 0.00 3.07
5203 6031 3.435671 AGCAAACCTAAAGCGTACATCAC 59.564 43.478 0.00 0.00 0.00 3.06
5204 6032 3.187637 GCAAACCTAAAGCGTACATCACA 59.812 43.478 0.00 0.00 0.00 3.58
5205 6033 4.142687 GCAAACCTAAAGCGTACATCACAT 60.143 41.667 0.00 0.00 0.00 3.21
5206 6034 5.323900 CAAACCTAAAGCGTACATCACATG 58.676 41.667 0.00 0.00 0.00 3.21
5207 6035 2.936498 ACCTAAAGCGTACATCACATGC 59.064 45.455 0.00 0.00 0.00 4.06
5208 6036 2.033747 CCTAAAGCGTACATCACATGCG 60.034 50.000 0.00 0.00 33.03 4.73
5209 6037 1.438651 AAAGCGTACATCACATGCGT 58.561 45.000 0.00 0.00 33.03 5.24
5210 6038 0.999406 AAGCGTACATCACATGCGTC 59.001 50.000 0.00 0.00 33.03 5.19
5211 6039 0.108851 AGCGTACATCACATGCGTCA 60.109 50.000 0.00 0.00 33.03 4.35
5212 6040 0.930310 GCGTACATCACATGCGTCAT 59.070 50.000 0.00 0.00 0.00 3.06
5213 6041 1.327460 GCGTACATCACATGCGTCATT 59.673 47.619 0.00 0.00 0.00 2.57
5214 6042 2.538037 GCGTACATCACATGCGTCATTA 59.462 45.455 0.00 0.00 0.00 1.90
5215 6043 3.184379 GCGTACATCACATGCGTCATTAT 59.816 43.478 0.00 0.00 0.00 1.28
5216 6044 4.664139 GCGTACATCACATGCGTCATTATC 60.664 45.833 0.00 0.00 0.00 1.75
5217 6045 4.444056 CGTACATCACATGCGTCATTATCA 59.556 41.667 0.00 0.00 0.00 2.15
5218 6046 5.119125 CGTACATCACATGCGTCATTATCAT 59.881 40.000 0.00 0.00 0.00 2.45
5219 6047 5.602458 ACATCACATGCGTCATTATCATC 57.398 39.130 0.00 0.00 0.00 2.92
5220 6048 4.151157 ACATCACATGCGTCATTATCATCG 59.849 41.667 0.00 0.00 0.00 3.84
5221 6049 3.976169 TCACATGCGTCATTATCATCGA 58.024 40.909 0.00 0.00 0.00 3.59
5222 6050 4.367450 TCACATGCGTCATTATCATCGAA 58.633 39.130 0.00 0.00 0.00 3.71
5223 6051 4.990426 TCACATGCGTCATTATCATCGAAT 59.010 37.500 0.00 0.00 0.00 3.34
5224 6052 5.119125 TCACATGCGTCATTATCATCGAATC 59.881 40.000 0.00 0.00 0.00 2.52
5225 6053 4.090498 ACATGCGTCATTATCATCGAATCG 59.910 41.667 0.00 0.00 0.00 3.34
5226 6054 2.408368 TGCGTCATTATCATCGAATCGC 59.592 45.455 0.00 0.00 41.17 4.58
5227 6055 2.663602 GCGTCATTATCATCGAATCGCT 59.336 45.455 0.00 0.00 38.46 4.93
5228 6056 3.480985 GCGTCATTATCATCGAATCGCTG 60.481 47.826 0.00 0.00 38.46 5.18
5229 6057 3.914364 CGTCATTATCATCGAATCGCTGA 59.086 43.478 11.62 11.62 36.48 4.26
5230 6058 4.201438 CGTCATTATCATCGAATCGCTGAC 60.201 45.833 11.46 7.58 34.94 3.51
5231 6059 4.090642 GTCATTATCATCGAATCGCTGACC 59.909 45.833 11.46 0.00 34.94 4.02
5232 6060 2.724977 TATCATCGAATCGCTGACCC 57.275 50.000 11.46 0.00 34.94 4.46
5233 6061 0.752658 ATCATCGAATCGCTGACCCA 59.247 50.000 11.46 0.00 34.94 4.51
5234 6062 0.752658 TCATCGAATCGCTGACCCAT 59.247 50.000 5.00 0.00 27.07 4.00
5235 6063 1.138859 TCATCGAATCGCTGACCCATT 59.861 47.619 5.00 0.00 27.07 3.16
5236 6064 1.942657 CATCGAATCGCTGACCCATTT 59.057 47.619 0.00 0.00 0.00 2.32
5237 6065 2.107950 TCGAATCGCTGACCCATTTT 57.892 45.000 0.00 0.00 0.00 1.82
5238 6066 2.006888 TCGAATCGCTGACCCATTTTC 58.993 47.619 0.00 0.00 0.00 2.29
5239 6067 1.737236 CGAATCGCTGACCCATTTTCA 59.263 47.619 0.00 0.00 0.00 2.69
5240 6068 2.223112 CGAATCGCTGACCCATTTTCAG 60.223 50.000 0.00 0.00 43.01 3.02
5241 6069 1.755179 ATCGCTGACCCATTTTCAGG 58.245 50.000 1.76 0.00 40.84 3.86
5242 6070 0.690192 TCGCTGACCCATTTTCAGGA 59.310 50.000 1.76 0.00 40.84 3.86
5243 6071 1.073125 TCGCTGACCCATTTTCAGGAA 59.927 47.619 1.76 0.00 40.84 3.36
5244 6072 1.885887 CGCTGACCCATTTTCAGGAAA 59.114 47.619 1.76 0.00 40.84 3.13
5245 6073 2.095059 CGCTGACCCATTTTCAGGAAAG 60.095 50.000 1.76 0.00 40.84 2.62
5246 6074 3.157087 GCTGACCCATTTTCAGGAAAGA 58.843 45.455 1.76 0.00 40.84 2.52
5247 6075 3.192212 GCTGACCCATTTTCAGGAAAGAG 59.808 47.826 1.76 0.00 40.84 2.85
5248 6076 4.655963 CTGACCCATTTTCAGGAAAGAGA 58.344 43.478 0.00 0.00 37.44 3.10
5249 6077 5.259632 CTGACCCATTTTCAGGAAAGAGAT 58.740 41.667 0.00 0.00 37.44 2.75
5250 6078 5.256474 TGACCCATTTTCAGGAAAGAGATC 58.744 41.667 0.00 0.00 0.00 2.75
5251 6079 5.222109 TGACCCATTTTCAGGAAAGAGATCA 60.222 40.000 0.00 0.00 0.00 2.92
5252 6080 5.259632 ACCCATTTTCAGGAAAGAGATCAG 58.740 41.667 0.00 0.00 0.00 2.90
5253 6081 4.097589 CCCATTTTCAGGAAAGAGATCAGC 59.902 45.833 0.00 0.00 0.00 4.26
5254 6082 4.703575 CCATTTTCAGGAAAGAGATCAGCA 59.296 41.667 0.00 0.00 0.00 4.41
5255 6083 5.360144 CCATTTTCAGGAAAGAGATCAGCAT 59.640 40.000 0.00 0.00 0.00 3.79
5256 6084 6.459848 CCATTTTCAGGAAAGAGATCAGCATC 60.460 42.308 0.00 0.00 0.00 3.91
5257 6085 4.831674 TTCAGGAAAGAGATCAGCATCA 57.168 40.909 0.00 0.00 0.00 3.07
5258 6086 5.369409 TTCAGGAAAGAGATCAGCATCAT 57.631 39.130 0.00 0.00 0.00 2.45
5259 6087 4.958509 TCAGGAAAGAGATCAGCATCATC 58.041 43.478 0.00 0.00 0.00 2.92
5260 6088 4.654724 TCAGGAAAGAGATCAGCATCATCT 59.345 41.667 0.00 0.00 33.01 2.90
5261 6089 5.130643 TCAGGAAAGAGATCAGCATCATCTT 59.869 40.000 0.00 0.00 32.37 2.40
5262 6090 5.823570 CAGGAAAGAGATCAGCATCATCTTT 59.176 40.000 4.13 4.13 38.20 2.52
5263 6091 5.823570 AGGAAAGAGATCAGCATCATCTTTG 59.176 40.000 8.18 0.00 37.03 2.77
5264 6092 5.502153 AAAGAGATCAGCATCATCTTTGC 57.498 39.130 0.00 0.00 36.35 3.68
5265 6093 3.478509 AGAGATCAGCATCATCTTTGCC 58.521 45.455 0.00 0.00 41.06 4.52
5266 6094 2.553172 GAGATCAGCATCATCTTTGCCC 59.447 50.000 0.00 0.00 41.06 5.36
5267 6095 1.266175 GATCAGCATCATCTTTGCCCG 59.734 52.381 0.00 0.00 41.06 6.13
5268 6096 0.035152 TCAGCATCATCTTTGCCCGT 60.035 50.000 0.00 0.00 41.06 5.28
5269 6097 0.813184 CAGCATCATCTTTGCCCGTT 59.187 50.000 0.00 0.00 41.06 4.44
5270 6098 1.203052 CAGCATCATCTTTGCCCGTTT 59.797 47.619 0.00 0.00 41.06 3.60
5271 6099 1.203052 AGCATCATCTTTGCCCGTTTG 59.797 47.619 0.00 0.00 41.06 2.93
5272 6100 1.736696 GCATCATCTTTGCCCGTTTGG 60.737 52.381 0.00 0.00 33.95 3.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.066502 GCACTGGGAGGAGAAGTTCTC 60.067 57.143 22.47 22.47 42.66 2.87
1 2 0.980423 GCACTGGGAGGAGAAGTTCT 59.020 55.000 4.68 4.68 0.00 3.01
5 6 2.581354 CCGCACTGGGAGGAGAAG 59.419 66.667 0.00 0.00 39.08 2.85
14 15 1.077501 ATGGATGTTCCCGCACTGG 60.078 57.895 0.00 0.00 35.03 4.00
15 16 0.392863 TCATGGATGTTCCCGCACTG 60.393 55.000 0.00 0.00 35.03 3.66
17 18 1.173043 TTTCATGGATGTTCCCGCAC 58.827 50.000 0.00 0.00 35.03 5.34
18 19 1.916506 TTTTCATGGATGTTCCCGCA 58.083 45.000 0.00 0.00 35.03 5.69
19 20 2.879826 CTTTTTCATGGATGTTCCCGC 58.120 47.619 0.00 0.00 35.03 6.13
20 21 2.493278 AGCTTTTTCATGGATGTTCCCG 59.507 45.455 0.00 0.00 35.03 5.14
21 22 3.511146 TCAGCTTTTTCATGGATGTTCCC 59.489 43.478 0.00 0.00 35.03 3.97
22 23 4.789012 TCAGCTTTTTCATGGATGTTCC 57.211 40.909 0.00 0.00 36.96 3.62
23 24 8.761575 TTTATTCAGCTTTTTCATGGATGTTC 57.238 30.769 0.00 0.00 0.00 3.18
24 25 9.729281 AATTTATTCAGCTTTTTCATGGATGTT 57.271 25.926 0.00 0.00 0.00 2.71
25 26 9.374838 GAATTTATTCAGCTTTTTCATGGATGT 57.625 29.630 0.00 0.00 36.80 3.06
26 27 9.373603 TGAATTTATTCAGCTTTTTCATGGATG 57.626 29.630 1.12 0.00 41.51 3.51
27 28 9.947433 TTGAATTTATTCAGCTTTTTCATGGAT 57.053 25.926 5.41 0.00 46.34 3.41
28 29 9.775854 TTTGAATTTATTCAGCTTTTTCATGGA 57.224 25.926 5.41 0.00 46.34 3.41
74 75 1.228306 TAACCAGCCCACCGGTTTG 60.228 57.895 2.97 0.00 42.99 2.93
75 76 1.074248 CTAACCAGCCCACCGGTTT 59.926 57.895 2.97 0.00 42.99 3.27
84 86 1.666189 GTTTCAGATCGCTAACCAGCC 59.334 52.381 0.00 0.00 45.64 4.85
118 120 1.417517 AGCATTCGTCATGATGGCCTA 59.582 47.619 14.91 0.00 34.31 3.93
230 240 1.772453 GGGATCGAAAATGGGGAGGTA 59.228 52.381 0.00 0.00 0.00 3.08
231 241 0.551396 GGGATCGAAAATGGGGAGGT 59.449 55.000 0.00 0.00 0.00 3.85
318 330 1.878088 GTCACGGGATAGTAGCGATCA 59.122 52.381 0.00 0.00 0.00 2.92
365 377 9.681062 TCCCTTTTCATTTCCTAGTATAGTTTG 57.319 33.333 0.00 0.00 36.82 2.93
393 405 7.710907 CGATTTTTCTTTCCCTCCTTTTCTTTT 59.289 33.333 0.00 0.00 0.00 2.27
397 409 4.923871 GCGATTTTTCTTTCCCTCCTTTTC 59.076 41.667 0.00 0.00 0.00 2.29
400 412 2.826128 GGCGATTTTTCTTTCCCTCCTT 59.174 45.455 0.00 0.00 0.00 3.36
401 413 2.447443 GGCGATTTTTCTTTCCCTCCT 58.553 47.619 0.00 0.00 0.00 3.69
402 414 1.132453 CGGCGATTTTTCTTTCCCTCC 59.868 52.381 0.00 0.00 0.00 4.30
404 416 0.526211 GCGGCGATTTTTCTTTCCCT 59.474 50.000 12.98 0.00 0.00 4.20
471 495 3.637229 CGGTGATATACAACTGGAGGTCT 59.363 47.826 0.00 0.00 33.41 3.85
472 496 3.799232 GCGGTGATATACAACTGGAGGTC 60.799 52.174 0.00 0.00 33.41 3.85
473 497 2.102588 GCGGTGATATACAACTGGAGGT 59.897 50.000 0.00 0.00 33.41 3.85
474 498 2.548067 GGCGGTGATATACAACTGGAGG 60.548 54.545 0.00 0.00 33.41 4.30
475 499 2.548067 GGGCGGTGATATACAACTGGAG 60.548 54.545 0.00 0.00 33.41 3.86
476 500 1.414919 GGGCGGTGATATACAACTGGA 59.585 52.381 0.00 0.00 33.41 3.86
477 501 1.872237 CGGGCGGTGATATACAACTGG 60.872 57.143 0.00 0.00 33.41 4.00
478 502 1.067974 TCGGGCGGTGATATACAACTG 59.932 52.381 0.00 0.00 33.41 3.16
519 543 2.563179 CAAAGAGGAAGAGGGAGACGAA 59.437 50.000 0.00 0.00 0.00 3.85
529 557 2.877866 AGAGGACGACAAAGAGGAAGA 58.122 47.619 0.00 0.00 0.00 2.87
530 558 3.005897 TGAAGAGGACGACAAAGAGGAAG 59.994 47.826 0.00 0.00 0.00 3.46
531 559 2.963101 TGAAGAGGACGACAAAGAGGAA 59.037 45.455 0.00 0.00 0.00 3.36
532 560 2.296471 GTGAAGAGGACGACAAAGAGGA 59.704 50.000 0.00 0.00 0.00 3.71
563 611 0.178903 AGAGAGGCTTACCACCACCA 60.179 55.000 0.00 0.00 39.06 4.17
591 639 2.521224 GATAGAGGGGGCGGTCGT 60.521 66.667 0.00 0.00 0.00 4.34
597 645 0.684535 GCAAGAGAGATAGAGGGGGC 59.315 60.000 0.00 0.00 0.00 5.80
598 646 2.247358 GAGCAAGAGAGATAGAGGGGG 58.753 57.143 0.00 0.00 0.00 5.40
599 647 1.885887 CGAGCAAGAGAGATAGAGGGG 59.114 57.143 0.00 0.00 0.00 4.79
604 652 1.662876 GCGAGCGAGCAAGAGAGATAG 60.663 57.143 0.00 0.00 37.05 2.08
606 654 1.065600 GCGAGCGAGCAAGAGAGAT 59.934 57.895 0.00 0.00 37.05 2.75
713 761 2.032528 CCGACAGGCAGGAGCAAA 59.967 61.111 0.00 0.00 44.61 3.68
952 1005 0.179150 GCTCCTGCTAGTCACAGTCG 60.179 60.000 0.00 0.00 36.03 4.18
1115 1171 1.911357 TCCGTGAGTAGGAGGACTGTA 59.089 52.381 0.00 0.00 33.19 2.74
1120 1186 3.314307 AATGATCCGTGAGTAGGAGGA 57.686 47.619 0.00 0.00 41.66 3.71
1121 1187 3.639094 AGAAATGATCCGTGAGTAGGAGG 59.361 47.826 0.00 0.00 41.66 4.30
1122 1188 4.339530 TCAGAAATGATCCGTGAGTAGGAG 59.660 45.833 0.00 0.00 41.66 3.69
1235 1304 1.543802 CCGCACCATTTTACCATGTGT 59.456 47.619 0.00 0.00 0.00 3.72
1295 1379 5.567552 GCAGTGATTCTCTGTATTTTCAGC 58.432 41.667 15.15 0.00 35.63 4.26
1378 1548 7.619050 ACTGGGCAACTATCATAATCATCTAG 58.381 38.462 0.00 0.00 0.00 2.43
1465 1640 3.181507 ACACATCGCATACATCAAACTGC 60.182 43.478 0.00 0.00 0.00 4.40
1552 1727 1.133915 TCCCCTCCACAAACTGTCAAC 60.134 52.381 0.00 0.00 0.00 3.18
1586 1761 2.795110 GCTGCCTTTGCCAACACCA 61.795 57.895 0.00 0.00 36.33 4.17
1670 1845 3.059982 CGAGGGTTGACAGGCTCA 58.940 61.111 0.00 0.00 0.00 4.26
1676 1851 1.669440 GTACCAGCGAGGGTTGACA 59.331 57.895 3.65 0.00 43.89 3.58
1745 1920 1.807981 CGCGTTGTCGGCCTTCATA 60.808 57.895 0.00 0.00 37.56 2.15
1772 1947 2.753966 CGCCCTTCCAATGAGCGTG 61.754 63.158 0.00 0.00 41.78 5.34
1859 2034 2.847234 TCACCAACAGGCTCCCGT 60.847 61.111 0.00 0.00 0.00 5.28
2060 2235 0.583438 CATAGTTCTTGCCATCCGCG 59.417 55.000 0.00 0.00 42.08 6.46
2231 2406 1.748500 GCTGGCCTTCCTCTTGAGC 60.749 63.158 3.32 0.00 0.00 4.26
2255 2430 0.314302 CTAGCATAAGGACCCGGACG 59.686 60.000 0.73 0.00 0.00 4.79
2399 2574 2.730382 ACAATGCTGCCTGAATCATCA 58.270 42.857 5.91 0.00 0.00 3.07
2714 2889 5.118664 TCTCTGCTCGAAATTGTAAAGAACG 59.881 40.000 0.00 0.00 0.00 3.95
2984 3159 3.084646 TCCTTTGCCCGCCGGATA 61.085 61.111 5.05 0.00 0.00 2.59
3140 3315 1.666054 AAACAGTAAACCGTTCGCCA 58.334 45.000 0.00 0.00 0.00 5.69
3143 3318 5.617992 CACAACATAAACAGTAAACCGTTCG 59.382 40.000 0.00 0.00 0.00 3.95
3188 3363 0.247460 CAGATGCACTCTCGGGAACA 59.753 55.000 0.00 0.00 29.16 3.18
3189 3364 0.247736 ACAGATGCACTCTCGGGAAC 59.752 55.000 0.00 0.00 29.16 3.62
3191 3366 1.893062 CACAGATGCACTCTCGGGA 59.107 57.895 0.00 0.00 29.16 5.14
3209 3384 0.108945 GCCAGTCCAGAATTGCTTGC 60.109 55.000 0.00 0.00 0.00 4.01
3338 3513 1.225704 CCCATCCTGCTTCACCTCC 59.774 63.158 0.00 0.00 0.00 4.30
3377 3552 4.710375 ACGTAATCAGTATCAGGTTCTGGT 59.290 41.667 0.00 0.00 31.51 4.00
3404 3579 0.041833 ACCTCCTAGCCTCTTGAGCA 59.958 55.000 0.00 0.00 0.00 4.26
3464 3639 5.881923 ACCACAGGTTAAGTAGAACTGAA 57.118 39.130 0.00 0.00 27.29 3.02
3501 3676 8.131100 GCTGCTTCAACATGCTTTAGATATAAA 58.869 33.333 0.00 0.00 0.00 1.40
3502 3677 7.518848 CGCTGCTTCAACATGCTTTAGATATAA 60.519 37.037 0.00 0.00 0.00 0.98
3506 3681 3.181503 CGCTGCTTCAACATGCTTTAGAT 60.182 43.478 0.00 0.00 0.00 1.98
3507 3682 2.160219 CGCTGCTTCAACATGCTTTAGA 59.840 45.455 0.00 0.00 0.00 2.10
3560 3776 4.715534 TCCAGTGAACTACCATGGAAAA 57.284 40.909 21.47 2.10 37.12 2.29
3561 3777 4.715534 TTCCAGTGAACTACCATGGAAA 57.284 40.909 21.47 4.94 44.79 3.13
3568 3784 4.389077 CGATCAGTTTTCCAGTGAACTACC 59.611 45.833 0.00 0.00 38.41 3.18
3569 3785 4.143094 GCGATCAGTTTTCCAGTGAACTAC 60.143 45.833 0.00 0.00 38.41 2.73
3571 3787 2.808543 GCGATCAGTTTTCCAGTGAACT 59.191 45.455 0.00 0.00 38.41 3.01
3617 3834 5.486526 ACTTAAGCCTCTGTCTGATCTTTG 58.513 41.667 1.29 0.00 0.00 2.77
3627 3844 7.506328 ACGAATTAAAAACTTAAGCCTCTGT 57.494 32.000 1.29 0.00 0.00 3.41
3677 3894 4.806247 AGTTGTAAGAAGCATATGACGAGC 59.194 41.667 6.97 0.00 0.00 5.03
3731 3978 6.310467 TCCGTTGATTTTAAGAGACGAATCAG 59.690 38.462 0.00 0.00 39.05 2.90
3762 4009 9.599322 CACACAAGAGAACAATGTAATAGTTTC 57.401 33.333 0.00 0.00 0.00 2.78
3765 4012 7.450074 TCCACACAAGAGAACAATGTAATAGT 58.550 34.615 0.00 0.00 0.00 2.12
3766 4013 7.905604 TCCACACAAGAGAACAATGTAATAG 57.094 36.000 0.00 0.00 0.00 1.73
3767 4014 8.729756 CAATCCACACAAGAGAACAATGTAATA 58.270 33.333 0.00 0.00 0.00 0.98
3772 4062 5.443185 ACAATCCACACAAGAGAACAATG 57.557 39.130 0.00 0.00 0.00 2.82
3794 4086 4.871871 TGGCCAAATAACTGGATCCTTA 57.128 40.909 14.23 4.53 38.96 2.69
3803 4095 1.928868 AGCAGCTTGGCCAAATAACT 58.071 45.000 20.91 11.97 0.00 2.24
3811 4103 0.523519 GTGAAGTTAGCAGCTTGGCC 59.476 55.000 0.00 0.00 0.00 5.36
3820 4112 5.473504 TGAAAATGGAAGAGGTGAAGTTAGC 59.526 40.000 0.00 0.00 0.00 3.09
4057 4349 2.031163 ACCTTCTGCACGCACTCC 59.969 61.111 0.00 0.00 0.00 3.85
4353 4645 6.058183 ACTATAACAGCCTGCTATTTTCTGG 58.942 40.000 0.00 0.00 0.00 3.86
4536 4831 5.571357 GCGTTAACTTTATTGTCCACCATTG 59.429 40.000 3.71 0.00 0.00 2.82
4693 5509 2.864343 GTCACAAGGACGTATATGGCAC 59.136 50.000 0.00 0.00 36.65 5.01
4717 5534 2.033801 AGTGCAGCTCATCACAAACAAC 59.966 45.455 11.45 0.00 35.76 3.32
4718 5535 2.291465 GAGTGCAGCTCATCACAAACAA 59.709 45.455 11.45 0.00 43.58 2.83
4719 5536 1.875514 GAGTGCAGCTCATCACAAACA 59.124 47.619 11.45 0.00 43.58 2.83
4732 5549 6.651755 AGTTTTTGTTCAAATTGAGTGCAG 57.348 33.333 0.00 0.00 0.00 4.41
4735 5552 7.304622 CGTCGTAGTTTTTGTTCAAATTGAGTG 60.305 37.037 0.00 0.00 0.00 3.51
4784 5601 9.621629 CTCTCATATCTTATATACTCCCTTCGT 57.378 37.037 0.00 0.00 0.00 3.85
4785 5602 8.564574 GCTCTCATATCTTATATACTCCCTTCG 58.435 40.741 0.00 0.00 0.00 3.79
4786 5603 9.415008 TGCTCTCATATCTTATATACTCCCTTC 57.585 37.037 0.00 0.00 0.00 3.46
4787 5604 9.775539 TTGCTCTCATATCTTATATACTCCCTT 57.224 33.333 0.00 0.00 0.00 3.95
4788 5605 9.196139 GTTGCTCTCATATCTTATATACTCCCT 57.804 37.037 0.00 0.00 0.00 4.20
4789 5606 9.196139 AGTTGCTCTCATATCTTATATACTCCC 57.804 37.037 0.00 0.00 0.00 4.30
4879 5706 6.140303 TGTGGATACCGTATGTAGAGAAAC 57.860 41.667 0.00 0.00 31.61 2.78
4888 5715 5.238650 GGGAAAAGAATGTGGATACCGTATG 59.761 44.000 0.00 0.00 0.00 2.39
4894 5721 6.152661 TCAACATGGGAAAAGAATGTGGATAC 59.847 38.462 0.00 0.00 34.82 2.24
4896 5723 5.085920 TCAACATGGGAAAAGAATGTGGAT 58.914 37.500 0.00 0.00 34.82 3.41
4905 5732 4.459337 GGGTTAGACTCAACATGGGAAAAG 59.541 45.833 0.00 0.00 0.00 2.27
4961 5789 5.492895 GGGTTCAACCTCCTTTTTCAAAAA 58.507 37.500 6.51 0.00 38.64 1.94
4962 5790 4.080807 GGGGTTCAACCTCCTTTTTCAAAA 60.081 41.667 6.51 0.00 38.64 2.44
4963 5791 3.452990 GGGGTTCAACCTCCTTTTTCAAA 59.547 43.478 6.51 0.00 38.64 2.69
4964 5792 3.035363 GGGGTTCAACCTCCTTTTTCAA 58.965 45.455 6.51 0.00 38.64 2.69
4965 5793 2.673258 GGGGTTCAACCTCCTTTTTCA 58.327 47.619 6.51 0.00 38.64 2.69
4973 5801 2.035783 GGCAGGGGGTTCAACCTC 59.964 66.667 6.51 0.77 38.29 3.85
4974 5802 3.590574 GGGCAGGGGGTTCAACCT 61.591 66.667 6.51 0.00 38.64 3.50
4975 5803 4.696805 GGGGCAGGGGGTTCAACC 62.697 72.222 0.00 0.00 37.60 3.77
4989 5817 4.559063 CTGATGCAGAGGCCGGGG 62.559 72.222 2.18 0.00 40.13 5.73
4990 5818 3.335356 AACTGATGCAGAGGCCGGG 62.335 63.158 2.18 0.00 40.13 5.73
4991 5819 2.110967 CAACTGATGCAGAGGCCGG 61.111 63.158 0.00 0.00 40.13 6.13
4992 5820 0.463295 ATCAACTGATGCAGAGGCCG 60.463 55.000 0.00 0.00 40.13 6.13
4993 5821 1.022735 CATCAACTGATGCAGAGGCC 58.977 55.000 6.76 0.00 44.44 5.19
5002 5830 5.443283 AGATGGTTGTATGCATCAACTGAT 58.557 37.500 26.59 21.47 42.97 2.90
5003 5831 4.847198 AGATGGTTGTATGCATCAACTGA 58.153 39.130 26.59 19.21 42.97 3.41
5004 5832 5.571784 AAGATGGTTGTATGCATCAACTG 57.428 39.130 26.59 0.00 42.97 3.16
5005 5833 7.886629 ATAAAGATGGTTGTATGCATCAACT 57.113 32.000 26.59 16.37 42.97 3.16
5030 5858 9.567776 TCTTGTCAGGTCTTTGTTGAATAATTA 57.432 29.630 0.00 0.00 0.00 1.40
5031 5859 8.463930 TCTTGTCAGGTCTTTGTTGAATAATT 57.536 30.769 0.00 0.00 0.00 1.40
5032 5860 8.463930 TTCTTGTCAGGTCTTTGTTGAATAAT 57.536 30.769 0.00 0.00 0.00 1.28
5033 5861 7.873719 TTCTTGTCAGGTCTTTGTTGAATAA 57.126 32.000 0.00 0.00 0.00 1.40
5034 5862 9.739276 ATATTCTTGTCAGGTCTTTGTTGAATA 57.261 29.630 0.00 0.00 0.00 1.75
5035 5863 6.966534 ATTCTTGTCAGGTCTTTGTTGAAT 57.033 33.333 0.00 0.00 0.00 2.57
5036 5864 8.999431 GTATATTCTTGTCAGGTCTTTGTTGAA 58.001 33.333 0.00 0.00 0.00 2.69
5037 5865 8.154203 TGTATATTCTTGTCAGGTCTTTGTTGA 58.846 33.333 0.00 0.00 0.00 3.18
5038 5866 8.322906 TGTATATTCTTGTCAGGTCTTTGTTG 57.677 34.615 0.00 0.00 0.00 3.33
5039 5867 9.167311 GATGTATATTCTTGTCAGGTCTTTGTT 57.833 33.333 0.00 0.00 0.00 2.83
5040 5868 8.321353 TGATGTATATTCTTGTCAGGTCTTTGT 58.679 33.333 0.00 0.00 0.00 2.83
5041 5869 8.722480 TGATGTATATTCTTGTCAGGTCTTTG 57.278 34.615 0.00 0.00 0.00 2.77
5042 5870 9.388506 CTTGATGTATATTCTTGTCAGGTCTTT 57.611 33.333 0.00 0.00 0.00 2.52
5043 5871 7.497249 GCTTGATGTATATTCTTGTCAGGTCTT 59.503 37.037 0.00 0.00 0.00 3.01
5044 5872 6.989169 GCTTGATGTATATTCTTGTCAGGTCT 59.011 38.462 0.00 0.00 0.00 3.85
5045 5873 6.989169 AGCTTGATGTATATTCTTGTCAGGTC 59.011 38.462 0.00 0.00 0.00 3.85
5046 5874 6.893583 AGCTTGATGTATATTCTTGTCAGGT 58.106 36.000 0.00 0.00 0.00 4.00
5047 5875 7.386299 GGTAGCTTGATGTATATTCTTGTCAGG 59.614 40.741 0.00 0.00 0.00 3.86
5048 5876 7.386299 GGGTAGCTTGATGTATATTCTTGTCAG 59.614 40.741 0.00 0.00 0.00 3.51
5049 5877 7.217200 GGGTAGCTTGATGTATATTCTTGTCA 58.783 38.462 0.00 0.00 0.00 3.58
5050 5878 6.366332 CGGGTAGCTTGATGTATATTCTTGTC 59.634 42.308 0.00 0.00 0.00 3.18
5051 5879 6.041637 TCGGGTAGCTTGATGTATATTCTTGT 59.958 38.462 0.00 0.00 0.00 3.16
5052 5880 6.455647 TCGGGTAGCTTGATGTATATTCTTG 58.544 40.000 0.00 0.00 0.00 3.02
5053 5881 6.665992 TCGGGTAGCTTGATGTATATTCTT 57.334 37.500 0.00 0.00 0.00 2.52
5054 5882 6.665992 TTCGGGTAGCTTGATGTATATTCT 57.334 37.500 0.00 0.00 0.00 2.40
5055 5883 5.348997 GCTTCGGGTAGCTTGATGTATATTC 59.651 44.000 0.00 0.00 38.15 1.75
5056 5884 5.238583 GCTTCGGGTAGCTTGATGTATATT 58.761 41.667 0.00 0.00 38.15 1.28
5057 5885 4.322801 GGCTTCGGGTAGCTTGATGTATAT 60.323 45.833 0.00 0.00 40.99 0.86
5058 5886 3.006537 GGCTTCGGGTAGCTTGATGTATA 59.993 47.826 0.00 0.00 40.99 1.47
5059 5887 2.224305 GGCTTCGGGTAGCTTGATGTAT 60.224 50.000 0.00 0.00 40.99 2.29
5060 5888 1.138266 GGCTTCGGGTAGCTTGATGTA 59.862 52.381 0.00 0.00 40.99 2.29
5061 5889 0.107654 GGCTTCGGGTAGCTTGATGT 60.108 55.000 0.00 0.00 40.99 3.06
5062 5890 0.107703 TGGCTTCGGGTAGCTTGATG 60.108 55.000 0.00 0.00 40.99 3.07
5063 5891 0.839946 ATGGCTTCGGGTAGCTTGAT 59.160 50.000 0.00 0.00 40.99 2.57
5064 5892 0.178068 GATGGCTTCGGGTAGCTTGA 59.822 55.000 0.00 0.00 40.99 3.02
5065 5893 0.107703 TGATGGCTTCGGGTAGCTTG 60.108 55.000 0.00 0.00 40.99 4.01
5066 5894 0.107654 GTGATGGCTTCGGGTAGCTT 60.108 55.000 0.00 0.00 40.99 3.74
5067 5895 0.978146 AGTGATGGCTTCGGGTAGCT 60.978 55.000 0.00 0.00 40.99 3.32
5068 5896 0.530870 GAGTGATGGCTTCGGGTAGC 60.531 60.000 0.00 0.00 40.48 3.58
5069 5897 0.824109 TGAGTGATGGCTTCGGGTAG 59.176 55.000 0.00 0.00 0.00 3.18
5070 5898 0.535335 GTGAGTGATGGCTTCGGGTA 59.465 55.000 0.00 0.00 0.00 3.69
5071 5899 1.296715 GTGAGTGATGGCTTCGGGT 59.703 57.895 0.00 0.00 0.00 5.28
5072 5900 1.021390 GTGTGAGTGATGGCTTCGGG 61.021 60.000 0.00 0.00 0.00 5.14
5073 5901 1.021390 GGTGTGAGTGATGGCTTCGG 61.021 60.000 0.00 0.00 0.00 4.30
5074 5902 0.036952 AGGTGTGAGTGATGGCTTCG 60.037 55.000 0.00 0.00 0.00 3.79
5075 5903 2.028112 TGTAGGTGTGAGTGATGGCTTC 60.028 50.000 0.00 0.00 0.00 3.86
5076 5904 1.977854 TGTAGGTGTGAGTGATGGCTT 59.022 47.619 0.00 0.00 0.00 4.35
5077 5905 1.644509 TGTAGGTGTGAGTGATGGCT 58.355 50.000 0.00 0.00 0.00 4.75
5078 5906 2.472695 TTGTAGGTGTGAGTGATGGC 57.527 50.000 0.00 0.00 0.00 4.40
5079 5907 3.997021 GAGTTTGTAGGTGTGAGTGATGG 59.003 47.826 0.00 0.00 0.00 3.51
5080 5908 3.675225 CGAGTTTGTAGGTGTGAGTGATG 59.325 47.826 0.00 0.00 0.00 3.07
5081 5909 3.572682 TCGAGTTTGTAGGTGTGAGTGAT 59.427 43.478 0.00 0.00 0.00 3.06
5082 5910 2.953648 TCGAGTTTGTAGGTGTGAGTGA 59.046 45.455 0.00 0.00 0.00 3.41
5083 5911 3.364889 TCGAGTTTGTAGGTGTGAGTG 57.635 47.619 0.00 0.00 0.00 3.51
5084 5912 5.717078 TTATCGAGTTTGTAGGTGTGAGT 57.283 39.130 0.00 0.00 0.00 3.41
5085 5913 6.330278 TCATTATCGAGTTTGTAGGTGTGAG 58.670 40.000 0.00 0.00 0.00 3.51
5086 5914 6.071560 ACTCATTATCGAGTTTGTAGGTGTGA 60.072 38.462 0.00 0.00 43.84 3.58
5087 5915 6.100004 ACTCATTATCGAGTTTGTAGGTGTG 58.900 40.000 0.00 0.00 43.84 3.82
5088 5916 6.282199 ACTCATTATCGAGTTTGTAGGTGT 57.718 37.500 0.00 0.00 43.84 4.16
5089 5917 7.481642 AGTACTCATTATCGAGTTTGTAGGTG 58.518 38.462 0.00 0.00 43.84 4.00
5090 5918 7.556996 AGAGTACTCATTATCGAGTTTGTAGGT 59.443 37.037 24.44 0.00 43.84 3.08
5091 5919 7.932335 AGAGTACTCATTATCGAGTTTGTAGG 58.068 38.462 24.44 0.00 43.84 3.18
5092 5920 8.613482 TGAGAGTACTCATTATCGAGTTTGTAG 58.387 37.037 24.44 0.00 46.55 2.74
5093 5921 8.502105 TGAGAGTACTCATTATCGAGTTTGTA 57.498 34.615 24.44 0.00 46.55 2.41
5094 5922 7.392494 TGAGAGTACTCATTATCGAGTTTGT 57.608 36.000 24.44 0.00 46.55 2.83
5108 5936 3.057876 CGATATGGGCAGTGAGAGTACTC 60.058 52.174 15.41 15.41 42.88 2.59
5109 5937 2.887783 CGATATGGGCAGTGAGAGTACT 59.112 50.000 0.00 0.00 0.00 2.73
5110 5938 2.885266 TCGATATGGGCAGTGAGAGTAC 59.115 50.000 0.00 0.00 0.00 2.73
5111 5939 3.223674 TCGATATGGGCAGTGAGAGTA 57.776 47.619 0.00 0.00 0.00 2.59
5112 5940 2.073252 TCGATATGGGCAGTGAGAGT 57.927 50.000 0.00 0.00 0.00 3.24
5113 5941 2.298446 ACATCGATATGGGCAGTGAGAG 59.702 50.000 0.00 0.00 37.43 3.20
5114 5942 2.297315 GACATCGATATGGGCAGTGAGA 59.703 50.000 0.00 0.00 37.43 3.27
5115 5943 2.681706 GACATCGATATGGGCAGTGAG 58.318 52.381 0.00 0.00 37.43 3.51
5116 5944 1.000274 CGACATCGATATGGGCAGTGA 60.000 52.381 0.00 0.00 43.02 3.41
5117 5945 1.269778 ACGACATCGATATGGGCAGTG 60.270 52.381 8.54 0.00 43.02 3.66
5118 5946 1.000163 GACGACATCGATATGGGCAGT 60.000 52.381 8.54 0.00 43.02 4.40
5119 5947 1.702886 GACGACATCGATATGGGCAG 58.297 55.000 8.54 0.00 43.02 4.85
5120 5948 3.886044 GACGACATCGATATGGGCA 57.114 52.632 8.54 0.00 43.02 5.36
5130 5958 1.413382 GATGGATCAGCGACGACATC 58.587 55.000 0.00 0.00 0.00 3.06
5131 5959 0.032678 GGATGGATCAGCGACGACAT 59.967 55.000 0.00 0.00 0.00 3.06
5132 5960 1.319614 TGGATGGATCAGCGACGACA 61.320 55.000 0.00 0.00 0.00 4.35
5133 5961 0.872021 GTGGATGGATCAGCGACGAC 60.872 60.000 0.00 0.00 0.00 4.34
5134 5962 1.319614 TGTGGATGGATCAGCGACGA 61.320 55.000 0.00 0.00 31.51 4.20
5135 5963 0.249615 ATGTGGATGGATCAGCGACG 60.250 55.000 0.00 0.00 31.51 5.12
5136 5964 2.681706 CTATGTGGATGGATCAGCGAC 58.318 52.381 0.00 0.00 0.00 5.19
5137 5965 1.001293 GCTATGTGGATGGATCAGCGA 59.999 52.381 0.00 0.00 0.00 4.93
5138 5966 1.270465 TGCTATGTGGATGGATCAGCG 60.270 52.381 0.00 0.00 0.00 5.18
5139 5967 2.556144 TGCTATGTGGATGGATCAGC 57.444 50.000 0.00 0.00 0.00 4.26
5140 5968 5.048507 CGATATGCTATGTGGATGGATCAG 58.951 45.833 0.00 0.00 0.00 2.90
5141 5969 4.141869 CCGATATGCTATGTGGATGGATCA 60.142 45.833 0.00 0.00 0.00 2.92
5142 5970 4.141846 ACCGATATGCTATGTGGATGGATC 60.142 45.833 0.00 0.00 0.00 3.36
5143 5971 3.776969 ACCGATATGCTATGTGGATGGAT 59.223 43.478 0.00 0.00 0.00 3.41
5144 5972 3.173151 ACCGATATGCTATGTGGATGGA 58.827 45.455 0.00 0.00 0.00 3.41
5145 5973 3.616956 ACCGATATGCTATGTGGATGG 57.383 47.619 0.00 0.00 0.00 3.51
5146 5974 4.160439 AGGTACCGATATGCTATGTGGATG 59.840 45.833 6.18 0.00 0.00 3.51
5147 5975 4.353777 AGGTACCGATATGCTATGTGGAT 58.646 43.478 6.18 0.00 0.00 3.41
5148 5976 3.774734 AGGTACCGATATGCTATGTGGA 58.225 45.455 6.18 0.00 0.00 4.02
5149 5977 4.461431 TGTAGGTACCGATATGCTATGTGG 59.539 45.833 6.18 0.00 0.00 4.17
5150 5978 5.183331 ACTGTAGGTACCGATATGCTATGTG 59.817 44.000 6.18 0.00 0.00 3.21
5151 5979 5.322754 ACTGTAGGTACCGATATGCTATGT 58.677 41.667 6.18 0.00 0.00 2.29
5152 5980 5.447413 CGACTGTAGGTACCGATATGCTATG 60.447 48.000 6.18 0.00 0.00 2.23
5153 5981 4.634883 CGACTGTAGGTACCGATATGCTAT 59.365 45.833 6.18 0.00 0.00 2.97
5154 5982 3.999001 CGACTGTAGGTACCGATATGCTA 59.001 47.826 6.18 0.00 0.00 3.49
5155 5983 2.812591 CGACTGTAGGTACCGATATGCT 59.187 50.000 6.18 0.00 0.00 3.79
5156 5984 2.095364 CCGACTGTAGGTACCGATATGC 60.095 54.545 6.18 0.00 0.00 3.14
5157 5985 3.058432 CACCGACTGTAGGTACCGATATG 60.058 52.174 12.38 0.00 40.59 1.78
5158 5986 3.144506 CACCGACTGTAGGTACCGATAT 58.855 50.000 12.38 0.00 40.59 1.63
5159 5987 2.564771 CACCGACTGTAGGTACCGATA 58.435 52.381 12.38 0.00 40.59 2.92
5160 5988 1.386533 CACCGACTGTAGGTACCGAT 58.613 55.000 12.38 0.00 40.59 4.18
5161 5989 1.308069 GCACCGACTGTAGGTACCGA 61.308 60.000 12.38 0.00 40.59 4.69
5162 5990 1.138247 GCACCGACTGTAGGTACCG 59.862 63.158 12.38 2.18 40.59 4.02
5163 5991 0.172803 CTGCACCGACTGTAGGTACC 59.827 60.000 12.38 2.73 40.59 3.34
5164 5992 0.458025 GCTGCACCGACTGTAGGTAC 60.458 60.000 12.38 7.78 40.59 3.34
5165 5993 0.896479 TGCTGCACCGACTGTAGGTA 60.896 55.000 12.38 0.00 40.59 3.08
5166 5994 1.754380 TTGCTGCACCGACTGTAGGT 61.754 55.000 6.78 6.78 43.97 3.08
5167 5995 0.602638 TTTGCTGCACCGACTGTAGG 60.603 55.000 0.00 5.33 33.32 3.18
5168 5996 0.512952 GTTTGCTGCACCGACTGTAG 59.487 55.000 0.00 0.00 35.74 2.74
5169 5997 0.882927 GGTTTGCTGCACCGACTGTA 60.883 55.000 0.00 0.00 0.00 2.74
5170 5998 2.186826 GGTTTGCTGCACCGACTGT 61.187 57.895 0.00 0.00 0.00 3.55
5171 5999 0.602638 TAGGTTTGCTGCACCGACTG 60.603 55.000 0.00 0.00 39.56 3.51
5172 6000 0.107831 TTAGGTTTGCTGCACCGACT 59.892 50.000 0.00 1.06 39.56 4.18
5173 6001 0.948678 TTTAGGTTTGCTGCACCGAC 59.051 50.000 0.00 1.40 39.56 4.79
5174 6002 1.234821 CTTTAGGTTTGCTGCACCGA 58.765 50.000 0.00 0.00 39.56 4.69
5175 6003 0.387239 GCTTTAGGTTTGCTGCACCG 60.387 55.000 0.00 0.00 39.56 4.94
5176 6004 0.387239 CGCTTTAGGTTTGCTGCACC 60.387 55.000 0.00 0.57 34.06 5.01
5177 6005 0.310854 ACGCTTTAGGTTTGCTGCAC 59.689 50.000 0.00 0.00 0.00 4.57
5178 6006 1.533731 GTACGCTTTAGGTTTGCTGCA 59.466 47.619 0.00 0.00 0.00 4.41
5179 6007 1.533731 TGTACGCTTTAGGTTTGCTGC 59.466 47.619 0.00 0.00 0.00 5.25
5180 6008 3.435327 TGATGTACGCTTTAGGTTTGCTG 59.565 43.478 0.00 0.00 0.00 4.41
5181 6009 3.435671 GTGATGTACGCTTTAGGTTTGCT 59.564 43.478 0.00 0.00 0.00 3.91
5182 6010 3.187637 TGTGATGTACGCTTTAGGTTTGC 59.812 43.478 0.00 0.00 0.00 3.68
5183 6011 5.323900 CATGTGATGTACGCTTTAGGTTTG 58.676 41.667 0.00 0.00 0.00 2.93
5184 6012 4.142687 GCATGTGATGTACGCTTTAGGTTT 60.143 41.667 0.00 0.00 0.00 3.27
5185 6013 3.374058 GCATGTGATGTACGCTTTAGGTT 59.626 43.478 0.00 0.00 0.00 3.50
5186 6014 2.936498 GCATGTGATGTACGCTTTAGGT 59.064 45.455 0.00 0.00 0.00 3.08
5187 6015 2.033747 CGCATGTGATGTACGCTTTAGG 60.034 50.000 0.00 0.00 0.00 2.69
5188 6016 2.603110 ACGCATGTGATGTACGCTTTAG 59.397 45.455 14.43 0.00 0.00 1.85
5189 6017 2.601314 GACGCATGTGATGTACGCTTTA 59.399 45.455 14.43 0.00 0.00 1.85
5190 6018 1.393539 GACGCATGTGATGTACGCTTT 59.606 47.619 14.43 0.00 0.00 3.51
5191 6019 0.999406 GACGCATGTGATGTACGCTT 59.001 50.000 14.43 0.00 0.00 4.68
5192 6020 0.108851 TGACGCATGTGATGTACGCT 60.109 50.000 14.43 0.00 0.00 5.07
5193 6021 0.930310 ATGACGCATGTGATGTACGC 59.070 50.000 14.43 0.00 0.00 4.42
5194 6022 4.444056 TGATAATGACGCATGTGATGTACG 59.556 41.667 14.43 0.00 0.00 3.67
5195 6023 5.905480 TGATAATGACGCATGTGATGTAC 57.095 39.130 14.43 0.00 0.00 2.90
5196 6024 5.345741 CGATGATAATGACGCATGTGATGTA 59.654 40.000 14.43 0.00 0.00 2.29
5197 6025 4.151157 CGATGATAATGACGCATGTGATGT 59.849 41.667 14.43 0.00 0.00 3.06
5198 6026 4.386652 TCGATGATAATGACGCATGTGATG 59.613 41.667 14.43 0.00 0.00 3.07
5199 6027 4.559153 TCGATGATAATGACGCATGTGAT 58.441 39.130 14.43 0.00 0.00 3.06
5200 6028 3.976169 TCGATGATAATGACGCATGTGA 58.024 40.909 14.43 0.00 0.00 3.58
5201 6029 4.713854 TTCGATGATAATGACGCATGTG 57.286 40.909 4.30 4.30 0.00 3.21
5202 6030 4.090498 CGATTCGATGATAATGACGCATGT 59.910 41.667 0.00 0.00 0.00 3.21
5203 6031 4.562390 CGATTCGATGATAATGACGCATG 58.438 43.478 0.00 0.00 0.00 4.06
5204 6032 3.061295 GCGATTCGATGATAATGACGCAT 59.939 43.478 10.88 0.00 42.39 4.73
5205 6033 2.408368 GCGATTCGATGATAATGACGCA 59.592 45.455 10.88 0.00 42.39 5.24
5206 6034 2.663602 AGCGATTCGATGATAATGACGC 59.336 45.455 10.88 0.00 43.00 5.19
5207 6035 4.223096 CAGCGATTCGATGATAATGACG 57.777 45.455 18.89 0.00 46.56 4.35
5216 6044 1.586422 AATGGGTCAGCGATTCGATG 58.414 50.000 17.70 17.70 44.93 3.84
5217 6045 2.332063 AAATGGGTCAGCGATTCGAT 57.668 45.000 10.88 0.00 0.00 3.59
5218 6046 2.006888 GAAAATGGGTCAGCGATTCGA 58.993 47.619 10.88 0.00 0.00 3.71
5219 6047 1.737236 TGAAAATGGGTCAGCGATTCG 59.263 47.619 0.62 0.62 0.00 3.34
5220 6048 2.098117 CCTGAAAATGGGTCAGCGATTC 59.902 50.000 0.00 0.00 41.04 2.52
5221 6049 2.094675 CCTGAAAATGGGTCAGCGATT 58.905 47.619 0.00 0.00 41.04 3.34
5222 6050 1.281867 TCCTGAAAATGGGTCAGCGAT 59.718 47.619 0.00 0.00 41.04 4.58
5223 6051 0.690192 TCCTGAAAATGGGTCAGCGA 59.310 50.000 0.00 0.00 41.04 4.93
5224 6052 1.533625 TTCCTGAAAATGGGTCAGCG 58.466 50.000 0.00 0.00 41.04 5.18
5225 6053 3.157087 TCTTTCCTGAAAATGGGTCAGC 58.843 45.455 0.00 0.00 41.04 4.26
5226 6054 4.655963 TCTCTTTCCTGAAAATGGGTCAG 58.344 43.478 0.00 0.00 41.87 3.51
5227 6055 4.722526 TCTCTTTCCTGAAAATGGGTCA 57.277 40.909 0.00 0.00 0.00 4.02
5228 6056 5.256474 TGATCTCTTTCCTGAAAATGGGTC 58.744 41.667 0.00 0.00 0.00 4.46
5229 6057 5.259632 CTGATCTCTTTCCTGAAAATGGGT 58.740 41.667 0.00 0.00 0.00 4.51
5230 6058 4.097589 GCTGATCTCTTTCCTGAAAATGGG 59.902 45.833 0.00 0.00 0.00 4.00
5231 6059 4.703575 TGCTGATCTCTTTCCTGAAAATGG 59.296 41.667 0.00 0.00 0.00 3.16
5232 6060 5.892160 TGCTGATCTCTTTCCTGAAAATG 57.108 39.130 0.00 0.00 0.00 2.32
5233 6061 6.185511 TGATGCTGATCTCTTTCCTGAAAAT 58.814 36.000 0.00 0.00 0.00 1.82
5234 6062 5.563592 TGATGCTGATCTCTTTCCTGAAAA 58.436 37.500 0.00 0.00 0.00 2.29
5235 6063 5.169992 TGATGCTGATCTCTTTCCTGAAA 57.830 39.130 0.00 0.00 0.00 2.69
5236 6064 4.831674 TGATGCTGATCTCTTTCCTGAA 57.168 40.909 0.00 0.00 0.00 3.02
5237 6065 4.654724 AGATGATGCTGATCTCTTTCCTGA 59.345 41.667 0.00 0.00 0.00 3.86
5238 6066 4.963373 AGATGATGCTGATCTCTTTCCTG 58.037 43.478 0.00 0.00 0.00 3.86
5239 6067 5.633655 AAGATGATGCTGATCTCTTTCCT 57.366 39.130 0.00 0.00 29.17 3.36
5240 6068 5.505985 GCAAAGATGATGCTGATCTCTTTCC 60.506 44.000 0.00 0.00 40.64 3.13
5241 6069 5.505985 GGCAAAGATGATGCTGATCTCTTTC 60.506 44.000 0.00 0.00 43.34 2.62
5242 6070 4.338682 GGCAAAGATGATGCTGATCTCTTT 59.661 41.667 0.00 0.00 43.34 2.52
5243 6071 3.884091 GGCAAAGATGATGCTGATCTCTT 59.116 43.478 0.00 0.00 43.34 2.85
5244 6072 3.478509 GGCAAAGATGATGCTGATCTCT 58.521 45.455 0.00 0.00 43.34 3.10
5245 6073 2.553172 GGGCAAAGATGATGCTGATCTC 59.447 50.000 0.00 0.00 43.34 2.75
5246 6074 2.584236 GGGCAAAGATGATGCTGATCT 58.416 47.619 0.00 0.00 43.34 2.75
5247 6075 1.266175 CGGGCAAAGATGATGCTGATC 59.734 52.381 0.00 0.00 43.34 2.92
5248 6076 1.315690 CGGGCAAAGATGATGCTGAT 58.684 50.000 0.00 0.00 43.34 2.90
5249 6077 0.035152 ACGGGCAAAGATGATGCTGA 60.035 50.000 0.00 0.00 43.34 4.26
5250 6078 0.813184 AACGGGCAAAGATGATGCTG 59.187 50.000 0.00 0.00 43.34 4.41
5251 6079 1.203052 CAAACGGGCAAAGATGATGCT 59.797 47.619 0.00 0.00 43.34 3.79
5252 6080 1.632422 CAAACGGGCAAAGATGATGC 58.368 50.000 0.00 0.00 43.08 3.91
5253 6081 2.282701 CCAAACGGGCAAAGATGATG 57.717 50.000 0.00 0.00 0.00 3.07


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.