Multiple sequence alignment - TraesCS3B01G147600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G147600 chr3B 100.000 6616 0 0 1 6616 139031314 139037929 0.000000e+00 12218.0
1 TraesCS3B01G147600 chr3B 98.496 133 1 1 5047 5179 383716621 383716490 3.990000e-57 233.0
2 TraesCS3B01G147600 chr3B 92.208 154 12 0 6463 6616 139195445 139195598 1.120000e-52 219.0
3 TraesCS3B01G147600 chr3B 91.558 154 9 3 5025 5178 740052885 740052736 6.720000e-50 209.0
4 TraesCS3B01G147600 chr3B 100.000 28 0 0 6322 6349 139037662 139037635 1.200000e-02 52.8
5 TraesCS3B01G147600 chr3D 94.106 4598 191 32 1 4578 89540397 89544934 0.000000e+00 6916.0
6 TraesCS3B01G147600 chr3D 94.945 455 8 6 5177 5616 89545328 89545782 0.000000e+00 699.0
7 TraesCS3B01G147600 chr3D 95.185 270 13 0 4575 4844 89544973 89545242 1.700000e-115 427.0
8 TraesCS3B01G147600 chr3D 91.958 286 11 5 6332 6608 89546128 89546410 2.240000e-104 390.0
9 TraesCS3B01G147600 chr3D 80.338 473 40 33 6168 6616 89627219 89627662 6.440000e-80 309.0
10 TraesCS3B01G147600 chr3D 91.573 178 10 2 6146 6319 89545910 89546086 2.380000e-59 241.0
11 TraesCS3B01G147600 chr3D 94.156 154 9 0 6463 6616 89638086 89638239 1.110000e-57 235.0
12 TraesCS3B01G147600 chr3D 97.744 133 2 1 5047 5179 290869072 290868941 1.860000e-55 228.0
13 TraesCS3B01G147600 chr3D 96.269 134 3 1 4840 4971 67064911 67064778 1.120000e-52 219.0
14 TraesCS3B01G147600 chr3D 96.923 130 2 1 4837 4964 11338054 11337925 4.020000e-52 217.0
15 TraesCS3B01G147600 chr3A 94.131 4447 199 30 151 4578 106302666 106307069 0.000000e+00 6709.0
16 TraesCS3B01G147600 chr3A 94.714 454 10 7 5177 5616 106307462 106307915 0.000000e+00 693.0
17 TraesCS3B01G147600 chr3A 96.296 270 10 0 4575 4844 106307108 106307377 1.690000e-120 444.0
18 TraesCS3B01G147600 chr3A 92.857 294 12 4 6332 6616 106308817 106309110 1.030000e-112 418.0
19 TraesCS3B01G147600 chr3A 88.644 317 19 8 5845 6146 106307914 106308228 2.910000e-98 370.0
20 TraesCS3B01G147600 chr3A 94.545 165 9 0 6146 6310 106308515 106308679 8.510000e-64 255.0
21 TraesCS3B01G147600 chr3A 92.857 154 11 0 6463 6616 106397206 106397359 2.400000e-54 224.0
22 TraesCS3B01G147600 chr3A 96.970 132 4 0 5612 5743 52198984 52198853 8.640000e-54 222.0
23 TraesCS3B01G147600 chr3A 91.304 161 11 3 8 165 106285223 106285383 4.020000e-52 217.0
24 TraesCS3B01G147600 chr3A 96.241 133 3 1 4835 4965 598561956 598561824 4.020000e-52 217.0
25 TraesCS3B01G147600 chr3A 94.245 139 7 1 5613 5751 644809128 644809265 1.870000e-50 211.0
26 TraesCS3B01G147600 chr3A 94.845 97 5 0 4958 5054 106307368 106307464 1.150000e-32 152.0
27 TraesCS3B01G147600 chr6B 94.558 147 6 2 5035 5179 15392076 15392222 6.680000e-55 226.0
28 TraesCS3B01G147600 chr6B 96.923 130 2 1 4837 4964 277700184 277700313 4.020000e-52 217.0
29 TraesCS3B01G147600 chr5B 97.710 131 3 0 5048 5178 640272871 640272741 6.680000e-55 226.0
30 TraesCS3B01G147600 chr5B 97.674 129 1 1 4840 4966 476637939 476638067 3.110000e-53 220.0
31 TraesCS3B01G147600 chr5B 97.656 128 1 1 4839 4964 626068695 626068822 1.120000e-52 219.0
32 TraesCS3B01G147600 chr2D 97.710 131 3 0 5048 5178 561025752 561025622 6.680000e-55 226.0
33 TraesCS3B01G147600 chr2D 96.992 133 4 0 5052 5184 536091153 536091021 2.400000e-54 224.0
34 TraesCS3B01G147600 chr2D 79.412 238 28 10 5614 5843 136606484 136606708 1.490000e-31 148.0
35 TraesCS3B01G147600 chr1B 98.425 127 2 0 5614 5740 626227005 626226879 2.400000e-54 224.0
36 TraesCS3B01G147600 chr1B 96.992 133 1 2 4840 4970 623397562 623397431 3.110000e-53 220.0
37 TraesCS3B01G147600 chr5D 96.350 137 2 3 5041 5176 211375613 211375747 8.640000e-54 222.0
38 TraesCS3B01G147600 chr5D 90.179 112 8 3 5739 5847 69953655 69953544 6.920000e-30 143.0
39 TraesCS3B01G147600 chr7B 95.652 138 5 1 5041 5178 685050035 685050171 3.110000e-53 220.0
40 TraesCS3B01G147600 chr7B 97.656 128 1 1 4840 4965 512769767 512769640 1.120000e-52 219.0
41 TraesCS3B01G147600 chr7B 91.589 107 7 2 5743 5847 714316002 714316108 5.350000e-31 147.0
42 TraesCS3B01G147600 chr2B 96.947 131 4 0 5613 5743 648808659 648808529 3.110000e-53 220.0
43 TraesCS3B01G147600 chr2B 79.079 239 27 11 5614 5843 195058177 195058401 6.920000e-30 143.0
44 TraesCS3B01G147600 chr1D 97.638 127 3 0 5614 5740 336626984 336626858 1.120000e-52 219.0
45 TraesCS3B01G147600 chr1A 96.241 133 5 0 5608 5740 529068371 529068239 1.120000e-52 219.0
46 TraesCS3B01G147600 chr1A 96.241 133 2 2 4836 4966 562906782 562906913 1.440000e-51 215.0
47 TraesCS3B01G147600 chr1A 87.143 140 9 6 5723 5853 501025818 501025679 4.130000e-32 150.0
48 TraesCS3B01G147600 chrUn 83.058 242 24 14 5614 5845 339419725 339419959 3.130000e-48 204.0
49 TraesCS3B01G147600 chrUn 83.058 242 24 14 5614 5845 339422295 339422529 3.130000e-48 204.0
50 TraesCS3B01G147600 chrUn 83.058 242 24 14 5614 5845 389022432 389022666 3.130000e-48 204.0
51 TraesCS3B01G147600 chr4B 92.593 108 5 2 5739 5843 404853327 404853220 1.150000e-32 152.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G147600 chr3B 139031314 139037929 6615 False 12218.000000 12218 100.000000 1 6616 1 chr3B.!!$F1 6615
1 TraesCS3B01G147600 chr3D 89540397 89546410 6013 False 1734.600000 6916 93.553400 1 6608 5 chr3D.!!$F3 6607
2 TraesCS3B01G147600 chr3A 106302666 106309110 6444 False 1291.571429 6709 93.718857 151 6616 7 chr3A.!!$F4 6465
3 TraesCS3B01G147600 chrUn 339419725 339422529 2804 False 204.000000 204 83.058000 5614 5845 2 chrUn.!!$F2 231

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
987 1007 0.034896 CACCACAGTACCACACTCCC 59.965 60.0 0.00 0.0 34.26 4.30 F
1281 1304 0.182775 CCCCCTCCATTTACCCTTCG 59.817 60.0 0.00 0.0 0.00 3.79 F
1818 1845 0.467844 TGTGGTGTGCAATCCAAGCT 60.468 50.0 11.88 0.0 35.38 3.74 F
2019 2046 1.230324 GGCATGAGCGGATAGAAACC 58.770 55.0 0.00 0.0 43.41 3.27 F
3863 3892 2.224314 CGAGCAGTTGGTTCTTTTCCTC 59.776 50.0 0.00 0.0 0.00 3.71 F
4856 4930 0.038744 AGTACTCCCTCCGTCCGAAA 59.961 55.0 0.00 0.0 0.00 3.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1805 1832 0.524862 CCTGTCAGCTTGGATTGCAC 59.475 55.000 0.00 0.0 0.00 4.57 R
2850 2878 1.911357 AGACATGAGGCAACATCCAGA 59.089 47.619 0.00 0.0 41.41 3.86 R
3764 3793 4.193865 GCATTGGCCTTGCTGAAATAAAT 58.806 39.130 20.04 0.0 37.14 1.40 R
3873 3902 3.682372 GCTACAGAGCCATGCTTTAAC 57.318 47.619 0.00 0.0 43.49 2.01 R
4941 5015 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.0 44.66 2.12 R
5892 8555 0.110486 TGACCTGAAGGAACAAGGGC 59.890 55.000 2.62 0.0 38.94 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 7.908082 CAGTTCTTTTGACGAAACACATAGAAA 59.092 33.333 0.00 0.00 0.00 2.52
73 74 4.842376 GCGTATTTAACCGTGTTTGAAGAC 59.158 41.667 0.00 0.00 0.00 3.01
101 105 2.046313 CATGAGCACACTCGCAAAAAC 58.954 47.619 0.00 0.00 46.69 2.43
105 109 2.258755 AGCACACTCGCAAAAACAAAC 58.741 42.857 0.00 0.00 0.00 2.93
129 133 9.492730 AACCCAAATAGATATTGGTTCAAAGAT 57.507 29.630 4.74 0.00 44.77 2.40
203 207 2.749076 GAGCACAAATACACCTGCATGA 59.251 45.455 0.00 0.00 31.71 3.07
355 362 6.096141 TGAGTGCTCCAAAATGTGTCTTTTTA 59.904 34.615 0.00 0.00 0.00 1.52
360 367 6.478512 TCCAAAATGTGTCTTTTTAAGCCT 57.521 33.333 0.00 0.00 0.00 4.58
403 410 3.557595 GCCTCTACGGATGTCATTTCAAG 59.442 47.826 0.00 0.00 33.16 3.02
410 417 6.834168 ACGGATGTCATTTCAAGGTAAAAT 57.166 33.333 0.00 0.00 0.00 1.82
497 505 1.378531 TCATGCGGTGTATTTGAGCC 58.621 50.000 0.00 0.00 0.00 4.70
512 520 1.490490 TGAGCCCGGAAGCAGATTATT 59.510 47.619 0.73 0.00 34.23 1.40
523 531 4.000331 AGCAGATTATTCATGTCCCTCG 58.000 45.455 0.00 0.00 0.00 4.63
528 536 6.462500 CAGATTATTCATGTCCCTCGAAGAT 58.538 40.000 0.00 0.00 33.89 2.40
558 566 0.840617 TGGTGACAACTTGTAGGCCA 59.159 50.000 5.01 1.46 37.44 5.36
568 576 2.027745 ACTTGTAGGCCATCAGTCACAG 60.028 50.000 5.01 0.00 0.00 3.66
593 602 6.201425 GTGAACTACGTTAGGAATGAACACAA 59.799 38.462 0.00 0.00 0.00 3.33
594 603 6.762187 TGAACTACGTTAGGAATGAACACAAA 59.238 34.615 0.00 0.00 0.00 2.83
637 646 2.151202 ACCAACTGCTAAACATCCACG 58.849 47.619 0.00 0.00 0.00 4.94
698 709 1.599542 GACCGCCTTGCAGTGATATTC 59.400 52.381 0.00 0.00 0.00 1.75
723 735 5.681105 ACAAAGAAACAACGACGATCATTTG 59.319 36.000 0.00 6.05 0.00 2.32
732 744 5.006153 ACGACGATCATTTGAATACCTCA 57.994 39.130 0.00 0.00 0.00 3.86
794 806 1.281577 TCTGGTGCATCATGCTGGTTA 59.718 47.619 11.84 0.00 45.31 2.85
807 819 5.185635 TCATGCTGGTTAAAAATCCTCAAGG 59.814 40.000 0.00 0.00 0.00 3.61
901 919 6.070881 TCCCATTTTTCAATTCCACATCGAAT 60.071 34.615 0.00 0.00 33.84 3.34
976 996 1.077787 CACCACACCACACCACAGT 60.078 57.895 0.00 0.00 0.00 3.55
979 999 0.534203 CCACACCACACCACAGTACC 60.534 60.000 0.00 0.00 0.00 3.34
980 1000 0.179234 CACACCACACCACAGTACCA 59.821 55.000 0.00 0.00 0.00 3.25
981 1001 0.179468 ACACCACACCACAGTACCAC 59.821 55.000 0.00 0.00 0.00 4.16
982 1002 0.179234 CACCACACCACAGTACCACA 59.821 55.000 0.00 0.00 0.00 4.17
983 1003 0.179468 ACCACACCACAGTACCACAC 59.821 55.000 0.00 0.00 0.00 3.82
984 1004 0.468226 CCACACCACAGTACCACACT 59.532 55.000 0.00 0.00 38.32 3.55
985 1005 1.540363 CCACACCACAGTACCACACTC 60.540 57.143 0.00 0.00 34.26 3.51
986 1006 0.756903 ACACCACAGTACCACACTCC 59.243 55.000 0.00 0.00 34.26 3.85
987 1007 0.034896 CACCACAGTACCACACTCCC 59.965 60.000 0.00 0.00 34.26 4.30
988 1008 1.292223 CCACAGTACCACACTCCCG 59.708 63.158 0.00 0.00 34.26 5.14
989 1009 1.183030 CCACAGTACCACACTCCCGA 61.183 60.000 0.00 0.00 34.26 5.14
990 1010 0.895530 CACAGTACCACACTCCCGAT 59.104 55.000 0.00 0.00 34.26 4.18
991 1011 1.135083 CACAGTACCACACTCCCGATC 60.135 57.143 0.00 0.00 34.26 3.69
992 1012 1.272536 ACAGTACCACACTCCCGATCT 60.273 52.381 0.00 0.00 34.26 2.75
993 1013 2.025605 ACAGTACCACACTCCCGATCTA 60.026 50.000 0.00 0.00 34.26 1.98
994 1014 2.358267 CAGTACCACACTCCCGATCTAC 59.642 54.545 0.00 0.00 34.26 2.59
995 1015 2.241685 AGTACCACACTCCCGATCTACT 59.758 50.000 0.00 0.00 28.33 2.57
1239 1262 3.307906 CCTCGTCGAACCCCACCA 61.308 66.667 0.00 0.00 0.00 4.17
1281 1304 0.182775 CCCCCTCCATTTACCCTTCG 59.817 60.000 0.00 0.00 0.00 3.79
1282 1305 0.916809 CCCCTCCATTTACCCTTCGT 59.083 55.000 0.00 0.00 0.00 3.85
1286 1309 3.442625 CCCTCCATTTACCCTTCGTTTTC 59.557 47.826 0.00 0.00 0.00 2.29
1287 1310 3.442625 CCTCCATTTACCCTTCGTTTTCC 59.557 47.826 0.00 0.00 0.00 3.13
1288 1311 3.423749 TCCATTTACCCTTCGTTTTCCC 58.576 45.455 0.00 0.00 0.00 3.97
1289 1312 2.494471 CCATTTACCCTTCGTTTTCCCC 59.506 50.000 0.00 0.00 0.00 4.81
1301 1325 3.129988 TCGTTTTCCCCTCTCTTCGTATC 59.870 47.826 0.00 0.00 0.00 2.24
1304 1328 5.590145 GTTTTCCCCTCTCTTCGTATCTAC 58.410 45.833 0.00 0.00 0.00 2.59
1305 1329 4.792513 TTCCCCTCTCTTCGTATCTACT 57.207 45.455 0.00 0.00 0.00 2.57
1306 1330 4.088056 TCCCCTCTCTTCGTATCTACTG 57.912 50.000 0.00 0.00 0.00 2.74
1329 1353 7.002250 TGTACTATCTAGTCGTGGCTAGTAT 57.998 40.000 8.26 4.21 39.44 2.12
1488 1512 0.694196 TAGTGGGTGTAGGGGTTTGC 59.306 55.000 0.00 0.00 0.00 3.68
1550 1574 3.942748 GCCATGTCATGCCATTTCATTTT 59.057 39.130 7.35 0.00 0.00 1.82
1585 1610 9.512435 GAATGAACATAATATTATGCCTGATGC 57.488 33.333 27.90 14.39 43.30 3.91
1634 1659 5.438761 GATGTGTACAGCCAGAAGTTTTT 57.561 39.130 0.00 0.00 0.00 1.94
1649 1674 7.013274 CCAGAAGTTTTTGATCTCCACACTTTA 59.987 37.037 0.00 0.00 0.00 1.85
1711 1736 2.234908 GTCAGGAGCATTGGTAGAGTGT 59.765 50.000 0.00 0.00 0.00 3.55
1712 1737 2.234661 TCAGGAGCATTGGTAGAGTGTG 59.765 50.000 0.00 0.00 0.00 3.82
1746 1771 8.792830 TCTCCTATTATCTGTTTGTTTTCCTG 57.207 34.615 0.00 0.00 0.00 3.86
1753 1778 5.229921 TCTGTTTGTTTTCCTGTTTCGAG 57.770 39.130 0.00 0.00 0.00 4.04
1784 1809 3.941483 AGTGCTTTGTGTATAGATGCACC 59.059 43.478 10.88 0.00 46.97 5.01
1790 1815 3.288092 TGTGTATAGATGCACCGAGAGT 58.712 45.455 8.07 0.00 41.82 3.24
1805 1832 2.602933 CGAGAGTGTGCAAAATGTGGTG 60.603 50.000 0.00 0.00 0.00 4.17
1807 1834 2.099592 AGAGTGTGCAAAATGTGGTGTG 59.900 45.455 0.00 0.00 0.00 3.82
1818 1845 0.467844 TGTGGTGTGCAATCCAAGCT 60.468 50.000 11.88 0.00 35.38 3.74
1839 1866 1.270414 ACAGGAGGCTGATCCCACAG 61.270 60.000 0.00 0.00 40.53 3.66
1915 1942 6.656902 TGAACAATAGATCAAGGCTTCTCAT 58.343 36.000 0.00 0.00 0.00 2.90
2019 2046 1.230324 GGCATGAGCGGATAGAAACC 58.770 55.000 0.00 0.00 43.41 3.27
2053 2080 9.988815 CAAGAGTTATGTCTAGCCATTAAGTAT 57.011 33.333 0.00 0.00 0.00 2.12
2058 2085 9.640963 GTTATGTCTAGCCATTAAGTATAGTGG 57.359 37.037 0.00 0.00 40.83 4.00
2107 2134 2.886523 TGCCTTGTTCCAAAGTGAGATG 59.113 45.455 0.00 0.00 0.00 2.90
2166 2193 8.599055 TTAGAATCAGATATGACATTCAGTGC 57.401 34.615 6.48 0.00 0.00 4.40
2176 2203 4.256110 TGACATTCAGTGCGATGATCTTT 58.744 39.130 11.73 0.00 0.00 2.52
2178 2205 5.874261 TGACATTCAGTGCGATGATCTTTAA 59.126 36.000 11.73 0.00 0.00 1.52
2179 2206 6.371271 TGACATTCAGTGCGATGATCTTTAAA 59.629 34.615 11.73 0.00 0.00 1.52
2180 2207 6.546395 ACATTCAGTGCGATGATCTTTAAAC 58.454 36.000 11.73 0.00 0.00 2.01
2181 2208 6.372659 ACATTCAGTGCGATGATCTTTAAACT 59.627 34.615 11.73 0.00 0.00 2.66
2518 2545 7.323049 ACGTGACAGTATAGGCAGATATATC 57.677 40.000 4.42 4.42 0.00 1.63
2519 2546 6.884836 ACGTGACAGTATAGGCAGATATATCA 59.115 38.462 15.08 0.00 0.00 2.15
2892 2920 9.715121 TGTCTCGTAACAAGGTATTTCTATTTT 57.285 29.630 0.00 0.00 0.00 1.82
3060 3089 7.748691 ATTAACCATAACGTAAACCACTGTT 57.251 32.000 0.00 0.00 35.82 3.16
3061 3090 5.678132 AACCATAACGTAAACCACTGTTC 57.322 39.130 0.00 0.00 32.15 3.18
3062 3091 4.964593 ACCATAACGTAAACCACTGTTCT 58.035 39.130 0.00 0.00 32.15 3.01
3063 3092 6.100404 ACCATAACGTAAACCACTGTTCTA 57.900 37.500 0.00 0.00 32.15 2.10
3256 3285 4.741676 GCTTTTCTCCATTTTCGCATATGG 59.258 41.667 4.56 0.00 42.18 2.74
3386 3415 9.712305 ATTTCGACCTATTAATCAAGGTATCAG 57.288 33.333 9.48 3.66 46.22 2.90
3390 3419 8.979574 CGACCTATTAATCAAGGTATCAGAAAC 58.020 37.037 9.48 0.00 46.22 2.78
3492 3521 7.332678 GCTAGCTTGTTTTGAAAATGGAATCAT 59.667 33.333 7.70 0.00 34.56 2.45
3635 3664 5.234972 TCTGATTTAGCTGCGTCACATATTG 59.765 40.000 0.00 0.00 0.00 1.90
3764 3793 7.883311 AGTTTAGCAAAGCATCTACCTTCTTAA 59.117 33.333 0.00 0.00 0.00 1.85
3805 3834 7.637229 CCAATGCTGAGAAACTAATACTCATG 58.363 38.462 0.00 0.00 39.42 3.07
3863 3892 2.224314 CGAGCAGTTGGTTCTTTTCCTC 59.776 50.000 0.00 0.00 0.00 3.71
3873 3902 6.207691 TGGTTCTTTTCCTCTTTGTTTCTG 57.792 37.500 0.00 0.00 0.00 3.02
3883 3912 6.738114 TCCTCTTTGTTTCTGTTAAAGCATG 58.262 36.000 0.00 0.00 32.81 4.06
4121 4153 6.263842 TCTTGAAGTCTTGAACATTCTGCAAT 59.736 34.615 0.00 0.00 0.00 3.56
4136 4168 6.439636 TTCTGCAATACTATGCCCTAATCT 57.560 37.500 0.00 0.00 45.83 2.40
4138 4170 5.307976 TCTGCAATACTATGCCCTAATCTGT 59.692 40.000 0.00 0.00 45.83 3.41
4169 4201 5.402867 GCAAGGCAGATTAACGTCTCTATAC 59.597 44.000 0.00 0.00 0.00 1.47
4171 4203 6.074544 AGGCAGATTAACGTCTCTATACAC 57.925 41.667 0.00 0.00 0.00 2.90
4183 4215 6.641314 ACGTCTCTATACACAGTTTTCACAAG 59.359 38.462 0.00 0.00 0.00 3.16
4329 4361 7.680730 TGAAAAAGGAGTTAGATAGACTTGCT 58.319 34.615 0.00 0.00 0.00 3.91
4413 4445 2.742589 GGGTGAAGTTACTGCTAAGCAC 59.257 50.000 0.00 0.00 33.79 4.40
4414 4446 3.557264 GGGTGAAGTTACTGCTAAGCACT 60.557 47.826 0.00 0.00 33.79 4.40
4597 4671 5.648092 ACATGGTAGCTTGTTTGTTATCTCC 59.352 40.000 7.58 0.00 0.00 3.71
4844 4918 4.978083 TCTCACAATTCGGTAGTACTCC 57.022 45.455 0.00 0.00 0.00 3.85
4845 4919 3.698040 TCTCACAATTCGGTAGTACTCCC 59.302 47.826 0.00 0.00 0.00 4.30
4846 4920 3.700038 CTCACAATTCGGTAGTACTCCCT 59.300 47.826 0.00 0.00 0.00 4.20
4847 4921 3.698040 TCACAATTCGGTAGTACTCCCTC 59.302 47.826 0.00 0.00 0.00 4.30
4848 4922 3.029570 ACAATTCGGTAGTACTCCCTCC 58.970 50.000 0.00 0.00 0.00 4.30
4849 4923 1.978454 ATTCGGTAGTACTCCCTCCG 58.022 55.000 16.96 16.96 42.12 4.63
4850 4924 0.620556 TTCGGTAGTACTCCCTCCGT 59.379 55.000 20.06 0.00 41.58 4.69
4851 4925 0.179000 TCGGTAGTACTCCCTCCGTC 59.821 60.000 20.06 0.00 41.58 4.79
4852 4926 0.817229 CGGTAGTACTCCCTCCGTCC 60.817 65.000 0.00 0.00 36.99 4.79
4853 4927 0.817229 GGTAGTACTCCCTCCGTCCG 60.817 65.000 0.00 0.00 0.00 4.79
4854 4928 0.179000 GTAGTACTCCCTCCGTCCGA 59.821 60.000 0.00 0.00 0.00 4.55
4855 4929 0.911769 TAGTACTCCCTCCGTCCGAA 59.088 55.000 0.00 0.00 0.00 4.30
4856 4930 0.038744 AGTACTCCCTCCGTCCGAAA 59.961 55.000 0.00 0.00 0.00 3.46
4857 4931 0.890683 GTACTCCCTCCGTCCGAAAA 59.109 55.000 0.00 0.00 0.00 2.29
4858 4932 1.479730 GTACTCCCTCCGTCCGAAAAT 59.520 52.381 0.00 0.00 0.00 1.82
4859 4933 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
4860 4934 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
4861 4935 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
4862 4936 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
4863 4937 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
4864 4938 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
4865 4939 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
4866 4940 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
4867 4941 4.181578 CTCCGTCCGAAAATACTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
4868 4942 4.178540 TCCGTCCGAAAATACTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
4869 4943 3.930229 CCGTCCGAAAATACTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
4870 4944 4.390603 CCGTCCGAAAATACTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
4871 4945 5.106869 CCGTCCGAAAATACTTGTCATCAAA 60.107 40.000 0.00 0.00 32.87 2.69
4872 4946 6.367421 CGTCCGAAAATACTTGTCATCAAAA 58.633 36.000 0.00 0.00 32.87 2.44
4873 4947 7.021196 CGTCCGAAAATACTTGTCATCAAAAT 58.979 34.615 0.00 0.00 32.87 1.82
4874 4948 7.007367 CGTCCGAAAATACTTGTCATCAAAATG 59.993 37.037 0.00 0.00 32.87 2.32
4875 4949 6.806249 TCCGAAAATACTTGTCATCAAAATGC 59.194 34.615 0.00 0.00 32.87 3.56
4876 4950 6.585702 CCGAAAATACTTGTCATCAAAATGCA 59.414 34.615 0.00 0.00 32.87 3.96
4877 4951 7.116090 CCGAAAATACTTGTCATCAAAATGCAA 59.884 33.333 0.00 0.00 32.87 4.08
4878 4952 8.486383 CGAAAATACTTGTCATCAAAATGCAAA 58.514 29.630 0.00 0.00 32.41 3.68
4882 4956 6.607735 ACTTGTCATCAAAATGCAAAAAGG 57.392 33.333 0.00 0.00 32.41 3.11
4883 4957 5.528320 ACTTGTCATCAAAATGCAAAAAGGG 59.472 36.000 0.00 0.00 32.41 3.95
4884 4958 5.287674 TGTCATCAAAATGCAAAAAGGGA 57.712 34.783 0.00 0.00 32.58 4.20
4885 4959 5.867330 TGTCATCAAAATGCAAAAAGGGAT 58.133 33.333 0.00 0.00 32.58 3.85
4886 4960 5.701750 TGTCATCAAAATGCAAAAAGGGATG 59.298 36.000 0.00 0.12 32.58 3.51
4887 4961 5.702209 GTCATCAAAATGCAAAAAGGGATGT 59.298 36.000 12.85 0.00 34.17 3.06
4888 4962 6.873076 GTCATCAAAATGCAAAAAGGGATGTA 59.127 34.615 12.85 2.68 34.17 2.29
4889 4963 7.550196 GTCATCAAAATGCAAAAAGGGATGTAT 59.450 33.333 12.85 0.00 34.17 2.29
4890 4964 7.765360 TCATCAAAATGCAAAAAGGGATGTATC 59.235 33.333 12.85 0.00 34.17 2.24
4891 4965 7.243604 TCAAAATGCAAAAAGGGATGTATCT 57.756 32.000 0.00 0.00 0.00 1.98
4892 4966 8.359875 TCAAAATGCAAAAAGGGATGTATCTA 57.640 30.769 0.00 0.00 0.00 1.98
4893 4967 8.811017 TCAAAATGCAAAAAGGGATGTATCTAA 58.189 29.630 0.00 0.00 0.00 2.10
4894 4968 9.434420 CAAAATGCAAAAAGGGATGTATCTAAA 57.566 29.630 0.00 0.00 0.00 1.85
4896 4970 9.435688 AAATGCAAAAAGGGATGTATCTAAAAC 57.564 29.630 0.00 0.00 0.00 2.43
4897 4971 7.775053 TGCAAAAAGGGATGTATCTAAAACT 57.225 32.000 0.00 0.00 0.00 2.66
4898 4972 8.871629 TGCAAAAAGGGATGTATCTAAAACTA 57.128 30.769 0.00 0.00 0.00 2.24
4899 4973 9.303116 TGCAAAAAGGGATGTATCTAAAACTAA 57.697 29.630 0.00 0.00 0.00 2.24
4939 5013 9.657419 ACATTCCCTTTTATTCATTTTGATGAC 57.343 29.630 0.00 0.00 0.00 3.06
4940 5014 9.656040 CATTCCCTTTTATTCATTTTGATGACA 57.344 29.630 0.00 0.00 0.00 3.58
4942 5016 9.709495 TTCCCTTTTATTCATTTTGATGACAAG 57.291 29.630 0.00 0.00 37.32 3.16
4943 5017 8.869109 TCCCTTTTATTCATTTTGATGACAAGT 58.131 29.630 0.00 0.00 37.32 3.16
4950 5024 8.915871 ATTCATTTTGATGACAAGTATTTCCG 57.084 30.769 0.00 0.00 37.32 4.30
4951 5025 6.851609 TCATTTTGATGACAAGTATTTCCGG 58.148 36.000 0.00 0.00 37.32 5.14
4952 5026 6.657117 TCATTTTGATGACAAGTATTTCCGGA 59.343 34.615 0.00 0.00 37.32 5.14
4953 5027 5.873179 TTTGATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
4954 5028 3.517602 TGATGACAAGTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
4955 5029 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
4956 5030 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
4957 5031 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
4958 5032 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
4959 5033 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
4960 5034 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
4961 5035 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
4962 5036 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
4963 5037 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
4964 5038 0.967380 TTTCCGGACGGAGGGAGTAC 60.967 60.000 13.64 0.00 46.06 2.73
4965 5039 1.856539 TTCCGGACGGAGGGAGTACT 61.857 60.000 13.64 0.00 46.06 2.73
4966 5040 1.823041 CCGGACGGAGGGAGTACTC 60.823 68.421 14.87 14.87 37.50 2.59
5028 5102 3.758554 GCTAGGCAAATGACCTTCTTTGA 59.241 43.478 0.00 0.00 38.81 2.69
5042 5116 9.241919 TGACCTTCTTTGAATGCTAAATTATCA 57.758 29.630 0.00 0.00 0.00 2.15
5062 5136 9.716556 ATTATCAATCTAATATACTCCCTCCGT 57.283 33.333 0.00 0.00 0.00 4.69
5063 5137 7.648039 ATCAATCTAATATACTCCCTCCGTC 57.352 40.000 0.00 0.00 0.00 4.79
5064 5138 5.950549 TCAATCTAATATACTCCCTCCGTCC 59.049 44.000 0.00 0.00 0.00 4.79
5065 5139 4.313020 TCTAATATACTCCCTCCGTCCC 57.687 50.000 0.00 0.00 0.00 4.46
5066 5140 3.659195 TCTAATATACTCCCTCCGTCCCA 59.341 47.826 0.00 0.00 0.00 4.37
5067 5141 3.339713 AATATACTCCCTCCGTCCCAA 57.660 47.619 0.00 0.00 0.00 4.12
5068 5142 2.852714 TATACTCCCTCCGTCCCAAA 57.147 50.000 0.00 0.00 0.00 3.28
5069 5143 1.961133 ATACTCCCTCCGTCCCAAAA 58.039 50.000 0.00 0.00 0.00 2.44
5070 5144 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
5071 5145 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
5072 5146 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
5073 5147 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
5074 5148 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
5075 5149 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
5076 5150 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
5077 5151 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
5078 5152 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
5079 5153 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
5080 5154 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
5081 5155 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
5082 5156 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
5083 5157 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
5084 5158 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
5085 5159 7.309194 CCGTCCCAAAATTCTTGTCTTAGATTT 60.309 37.037 0.00 0.00 0.00 2.17
5086 5160 7.538678 CGTCCCAAAATTCTTGTCTTAGATTTG 59.461 37.037 0.00 0.00 29.84 2.32
5087 5161 8.360390 GTCCCAAAATTCTTGTCTTAGATTTGT 58.640 33.333 0.00 0.00 28.79 2.83
5088 5162 8.576442 TCCCAAAATTCTTGTCTTAGATTTGTC 58.424 33.333 0.00 0.00 28.79 3.18
5089 5163 8.579863 CCCAAAATTCTTGTCTTAGATTTGTCT 58.420 33.333 0.00 0.00 28.79 3.41
5095 5169 8.709386 TTCTTGTCTTAGATTTGTCTAGATGC 57.291 34.615 0.00 0.00 0.00 3.91
5096 5170 6.975197 TCTTGTCTTAGATTTGTCTAGATGCG 59.025 38.462 0.00 0.00 0.00 4.73
5097 5171 5.592054 TGTCTTAGATTTGTCTAGATGCGG 58.408 41.667 0.00 0.00 0.00 5.69
5098 5172 5.359860 TGTCTTAGATTTGTCTAGATGCGGA 59.640 40.000 0.00 0.00 0.00 5.54
5099 5173 6.040955 TGTCTTAGATTTGTCTAGATGCGGAT 59.959 38.462 0.00 0.00 0.00 4.18
5100 5174 6.364706 GTCTTAGATTTGTCTAGATGCGGATG 59.635 42.308 0.00 0.00 0.00 3.51
5101 5175 4.679373 AGATTTGTCTAGATGCGGATGT 57.321 40.909 0.00 0.00 0.00 3.06
5102 5176 5.791336 AGATTTGTCTAGATGCGGATGTA 57.209 39.130 0.00 0.00 0.00 2.29
5103 5177 5.533482 AGATTTGTCTAGATGCGGATGTAC 58.467 41.667 0.00 0.00 0.00 2.90
5104 5178 3.728076 TTGTCTAGATGCGGATGTACC 57.272 47.619 0.00 0.00 0.00 3.34
5105 5179 2.945456 TGTCTAGATGCGGATGTACCT 58.055 47.619 0.00 0.00 36.31 3.08
5106 5180 4.094830 TGTCTAGATGCGGATGTACCTA 57.905 45.455 0.00 0.00 36.31 3.08
5107 5181 4.466827 TGTCTAGATGCGGATGTACCTAA 58.533 43.478 0.00 0.00 36.31 2.69
5108 5182 5.077564 TGTCTAGATGCGGATGTACCTAAT 58.922 41.667 0.00 0.00 36.31 1.73
5109 5183 6.243148 TGTCTAGATGCGGATGTACCTAATA 58.757 40.000 0.00 0.00 36.31 0.98
5110 5184 6.150641 TGTCTAGATGCGGATGTACCTAATAC 59.849 42.308 0.00 0.00 36.31 1.89
5111 5185 6.374894 GTCTAGATGCGGATGTACCTAATACT 59.625 42.308 0.00 0.00 34.56 2.12
5112 5186 7.551974 GTCTAGATGCGGATGTACCTAATACTA 59.448 40.741 0.00 0.00 34.56 1.82
5113 5187 8.105197 TCTAGATGCGGATGTACCTAATACTAA 58.895 37.037 0.00 0.00 34.56 2.24
5114 5188 7.534723 AGATGCGGATGTACCTAATACTAAA 57.465 36.000 0.00 0.00 34.56 1.85
5115 5189 7.959175 AGATGCGGATGTACCTAATACTAAAA 58.041 34.615 0.00 0.00 34.56 1.52
5116 5190 7.871463 AGATGCGGATGTACCTAATACTAAAAC 59.129 37.037 0.00 0.00 34.56 2.43
5117 5191 5.978919 TGCGGATGTACCTAATACTAAAACG 59.021 40.000 0.00 0.00 34.56 3.60
5118 5192 5.979517 GCGGATGTACCTAATACTAAAACGT 59.020 40.000 0.00 0.00 34.56 3.99
5119 5193 6.074676 GCGGATGTACCTAATACTAAAACGTG 60.075 42.308 0.00 0.00 34.56 4.49
5120 5194 7.195646 CGGATGTACCTAATACTAAAACGTGA 58.804 38.462 0.00 0.00 34.56 4.35
5121 5195 7.166473 CGGATGTACCTAATACTAAAACGTGAC 59.834 40.741 0.00 0.00 34.56 3.67
5122 5196 8.193438 GGATGTACCTAATACTAAAACGTGACT 58.807 37.037 0.00 0.00 34.56 3.41
5123 5197 9.578439 GATGTACCTAATACTAAAACGTGACTT 57.422 33.333 0.00 0.00 34.56 3.01
5124 5198 8.746922 TGTACCTAATACTAAAACGTGACTTG 57.253 34.615 0.00 0.00 34.56 3.16
5125 5199 8.575589 TGTACCTAATACTAAAACGTGACTTGA 58.424 33.333 0.00 0.00 34.56 3.02
5126 5200 9.578439 GTACCTAATACTAAAACGTGACTTGAT 57.422 33.333 0.00 0.00 0.00 2.57
5128 5202 9.578439 ACCTAATACTAAAACGTGACTTGATAC 57.422 33.333 0.00 0.00 0.00 2.24
5129 5203 9.577110 CCTAATACTAAAACGTGACTTGATACA 57.423 33.333 0.00 0.00 0.00 2.29
5132 5206 6.963049 ACTAAAACGTGACTTGATACATCC 57.037 37.500 0.00 0.00 0.00 3.51
5133 5207 4.921470 AAAACGTGACTTGATACATCCG 57.079 40.909 0.00 0.00 0.00 4.18
5134 5208 3.587797 AACGTGACTTGATACATCCGT 57.412 42.857 0.00 0.00 0.00 4.69
5135 5209 4.707030 AACGTGACTTGATACATCCGTA 57.293 40.909 0.00 0.00 0.00 4.02
5136 5210 4.913335 ACGTGACTTGATACATCCGTAT 57.087 40.909 0.00 0.00 41.16 3.06
5137 5211 5.258456 ACGTGACTTGATACATCCGTATT 57.742 39.130 0.00 0.00 38.48 1.89
5138 5212 5.657474 ACGTGACTTGATACATCCGTATTT 58.343 37.500 0.00 0.00 38.48 1.40
5139 5213 6.798482 ACGTGACTTGATACATCCGTATTTA 58.202 36.000 0.00 0.00 38.48 1.40
5140 5214 6.916387 ACGTGACTTGATACATCCGTATTTAG 59.084 38.462 0.00 0.00 38.48 1.85
5141 5215 7.136772 CGTGACTTGATACATCCGTATTTAGA 58.863 38.462 0.00 0.00 38.48 2.10
5142 5216 7.113124 CGTGACTTGATACATCCGTATTTAGAC 59.887 40.741 0.00 0.00 38.48 2.59
5143 5217 7.113124 GTGACTTGATACATCCGTATTTAGACG 59.887 40.741 0.00 0.00 38.48 4.18
5144 5218 7.012610 TGACTTGATACATCCGTATTTAGACGA 59.987 37.037 0.00 0.00 45.82 4.20
5145 5219 7.709947 ACTTGATACATCCGTATTTAGACGAA 58.290 34.615 0.00 0.00 45.82 3.85
5146 5220 8.358148 ACTTGATACATCCGTATTTAGACGAAT 58.642 33.333 0.00 0.00 45.82 3.34
5147 5221 8.738199 TTGATACATCCGTATTTAGACGAATC 57.262 34.615 0.00 0.00 45.82 2.52
5148 5222 8.107399 TGATACATCCGTATTTAGACGAATCT 57.893 34.615 0.00 0.00 45.82 2.40
5149 5223 9.223099 TGATACATCCGTATTTAGACGAATCTA 57.777 33.333 0.00 0.00 45.82 1.98
5152 5226 8.162878 ACATCCGTATTTAGACGAATCTAAGA 57.837 34.615 0.00 0.00 45.93 2.10
5153 5227 8.074972 ACATCCGTATTTAGACGAATCTAAGAC 58.925 37.037 0.00 0.00 45.93 3.01
5154 5228 7.558161 TCCGTATTTAGACGAATCTAAGACA 57.442 36.000 0.00 0.00 45.93 3.41
5155 5229 7.988737 TCCGTATTTAGACGAATCTAAGACAA 58.011 34.615 0.00 0.00 45.93 3.18
5156 5230 8.127327 TCCGTATTTAGACGAATCTAAGACAAG 58.873 37.037 0.00 0.00 45.93 3.16
5157 5231 8.127327 CCGTATTTAGACGAATCTAAGACAAGA 58.873 37.037 0.00 0.00 45.93 3.02
5158 5232 9.499585 CGTATTTAGACGAATCTAAGACAAGAA 57.500 33.333 0.00 0.00 45.93 2.52
5164 5238 8.034058 AGACGAATCTAAGACAAGAATTTTGG 57.966 34.615 0.00 0.00 31.46 3.28
5165 5239 7.119846 AGACGAATCTAAGACAAGAATTTTGGG 59.880 37.037 0.00 0.00 31.46 4.12
5166 5240 6.940298 ACGAATCTAAGACAAGAATTTTGGGA 59.060 34.615 0.00 0.00 0.00 4.37
5167 5241 7.094762 ACGAATCTAAGACAAGAATTTTGGGAC 60.095 37.037 0.00 0.00 0.00 4.46
5168 5242 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
5169 5243 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
5170 5244 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
5171 5245 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
5172 5246 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
5173 5247 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
5174 5248 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
5175 5249 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
5355 5433 7.065324 TGGTATACAAATTTTGAGTCGATCACC 59.935 37.037 15.81 10.31 37.77 4.02
5357 5435 3.188460 ACAAATTTTGAGTCGATCACCGG 59.812 43.478 15.81 0.00 37.77 5.28
5409 5499 1.173913 AATAAACCGCAGCTGAACCC 58.826 50.000 20.43 0.00 0.00 4.11
5651 5741 7.975616 CCGAAAATACTTGTCATCAAAATGGAT 59.024 33.333 0.00 0.00 33.42 3.41
5745 5840 1.516423 GACGGAGGGAGTACAAGCC 59.484 63.158 0.00 0.00 0.00 4.35
5746 5841 1.229082 ACGGAGGGAGTACAAGCCA 60.229 57.895 0.00 0.00 0.00 4.75
5752 5847 3.274288 GAGGGAGTACAAGCCAAATGAG 58.726 50.000 0.00 0.00 0.00 2.90
5758 5853 5.163713 GGAGTACAAGCCAAATGAGTGAATC 60.164 44.000 0.00 0.00 0.00 2.52
5760 5855 6.711277 AGTACAAGCCAAATGAGTGAATCTA 58.289 36.000 0.00 0.00 0.00 1.98
5763 5858 5.948162 ACAAGCCAAATGAGTGAATCTACAT 59.052 36.000 0.00 0.00 0.00 2.29
5764 5859 6.435277 ACAAGCCAAATGAGTGAATCTACATT 59.565 34.615 0.00 0.00 34.99 2.71
5765 5860 6.690194 AGCCAAATGAGTGAATCTACATTC 57.310 37.500 0.00 0.00 39.24 2.67
5768 5863 8.049117 AGCCAAATGAGTGAATCTACATTCTAA 58.951 33.333 0.00 0.00 39.49 2.10
5836 8499 9.685828 TCCAAAAAGACAAATATTTAGAAACGG 57.314 29.630 0.00 0.00 0.00 4.44
5871 8534 1.086067 AGCGTGCCATGATCTCAACG 61.086 55.000 0.00 0.00 31.70 4.10
5890 8553 3.482436 ACGAGTGGGTTTCTTTTATGCA 58.518 40.909 0.00 0.00 0.00 3.96
5892 8555 4.082787 ACGAGTGGGTTTCTTTTATGCATG 60.083 41.667 10.16 0.00 0.00 4.06
5893 8556 4.176271 GAGTGGGTTTCTTTTATGCATGC 58.824 43.478 11.82 11.82 0.00 4.06
5894 8557 3.055891 AGTGGGTTTCTTTTATGCATGCC 60.056 43.478 16.68 0.00 0.00 4.40
5895 8558 2.235898 TGGGTTTCTTTTATGCATGCCC 59.764 45.455 16.68 4.41 0.00 5.36
5896 8559 2.501316 GGGTTTCTTTTATGCATGCCCT 59.499 45.455 16.68 5.06 0.00 5.19
5897 8560 3.055167 GGGTTTCTTTTATGCATGCCCTT 60.055 43.478 16.68 2.45 0.00 3.95
5898 8561 3.934579 GGTTTCTTTTATGCATGCCCTTG 59.065 43.478 16.68 0.68 0.00 3.61
5912 8588 1.478654 GCCCTTGTTCCTTCAGGTCAA 60.479 52.381 0.00 0.35 36.34 3.18
5931 8607 0.614415 AATTCAAATCCTGCCGGCCA 60.614 50.000 26.77 11.42 0.00 5.36
5948 8624 3.498397 CGGCCAGCGATTATTTTATCAGT 59.502 43.478 2.24 0.00 0.00 3.41
5969 8645 4.468868 AGTGGCTAACGTTTACTATTCCCT 59.531 41.667 5.91 0.00 0.00 4.20
5976 8652 5.161943 ACGTTTACTATTCCCTTTCAGCT 57.838 39.130 0.00 0.00 0.00 4.24
5984 8660 6.494059 ACTATTCCCTTTCAGCTGGTATTTT 58.506 36.000 15.13 0.00 0.00 1.82
5986 8662 8.282256 ACTATTCCCTTTCAGCTGGTATTTTAT 58.718 33.333 15.13 3.66 0.00 1.40
5987 8663 7.588497 ATTCCCTTTCAGCTGGTATTTTATC 57.412 36.000 15.13 0.00 0.00 1.75
5988 8664 5.445964 TCCCTTTCAGCTGGTATTTTATCC 58.554 41.667 15.13 0.00 0.00 2.59
6070 8746 2.747855 CTCCCGGCCTTTGCAGAC 60.748 66.667 0.00 0.00 40.13 3.51
6084 8762 5.803967 CCTTTGCAGACAAAATCATAGCTTC 59.196 40.000 0.00 0.00 44.90 3.86
6181 9147 4.984161 ACGGATTGTTTTGCAGAAGAAATG 59.016 37.500 3.59 0.35 0.00 2.32
6218 9184 5.220739 GCAATGTCACCTGATACTCACAATC 60.221 44.000 0.00 0.00 0.00 2.67
6239 9205 8.067488 ACAATCCCCTCCATTACTGATTAATTT 58.933 33.333 0.00 0.00 0.00 1.82
6243 9209 6.239120 CCCCTCCATTACTGATTAATTTGCAG 60.239 42.308 2.02 2.02 35.81 4.41
6313 9283 8.075574 TGAACATGACAAGCAAACTACTAAATG 58.924 33.333 0.00 0.00 0.00 2.32
6315 9285 5.371115 TGACAAGCAAACTACTAAATGCC 57.629 39.130 0.00 0.00 39.59 4.40
6316 9286 4.824537 TGACAAGCAAACTACTAAATGCCA 59.175 37.500 0.00 0.00 39.59 4.92
6317 9287 5.048782 TGACAAGCAAACTACTAAATGCCAG 60.049 40.000 0.00 0.00 39.59 4.85
6318 9288 5.070001 ACAAGCAAACTACTAAATGCCAGA 58.930 37.500 0.00 0.00 39.59 3.86
6319 9289 5.048713 ACAAGCAAACTACTAAATGCCAGAC 60.049 40.000 0.00 0.00 39.59 3.51
6320 9290 4.651778 AGCAAACTACTAAATGCCAGACA 58.348 39.130 0.00 0.00 39.59 3.41
6321 9291 5.256474 AGCAAACTACTAAATGCCAGACAT 58.744 37.500 0.00 0.00 42.30 3.06
6322 9292 6.414732 AGCAAACTACTAAATGCCAGACATA 58.585 36.000 0.00 0.00 38.34 2.29
6328 9298 9.507329 AACTACTAAATGCCAGACATAATATGG 57.493 33.333 5.16 0.00 43.19 2.74
6364 9450 6.216569 ACCATATTAGCAGAGACGTAATGTG 58.783 40.000 0.00 0.00 0.00 3.21
6384 9470 1.141053 GATGGTTCCCAGCGATACCTT 59.859 52.381 0.00 0.00 36.75 3.50
6385 9471 1.868713 TGGTTCCCAGCGATACCTTA 58.131 50.000 0.00 0.00 0.00 2.69
6386 9472 1.760613 TGGTTCCCAGCGATACCTTAG 59.239 52.381 0.00 0.00 0.00 2.18
6387 9473 1.540580 GGTTCCCAGCGATACCTTAGC 60.541 57.143 0.00 0.00 0.00 3.09
6395 9489 4.320348 CCAGCGATACCTTAGCTAGTACAC 60.320 50.000 0.00 0.00 39.48 2.90
6398 9492 5.933463 AGCGATACCTTAGCTAGTACACTAG 59.067 44.000 11.35 11.35 46.63 2.57
6433 9528 0.030908 GCACTACCGGTAGCTAGCAG 59.969 60.000 36.20 21.19 36.66 4.24
6451 9549 4.970711 AGCAGAGCATAATTAGTGAGCAT 58.029 39.130 0.00 0.00 0.00 3.79
6452 9550 4.996122 AGCAGAGCATAATTAGTGAGCATC 59.004 41.667 0.00 0.00 0.00 3.91
6484 9582 2.906389 TCAACCATCACTGAGCTTAGGT 59.094 45.455 10.64 0.00 0.00 3.08
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 4.751098 TCTTCAAACACGGTTAAATACGCT 59.249 37.500 0.00 0.00 0.00 5.07
92 93 5.263968 TCTATTTGGGTTTGTTTTTGCGA 57.736 34.783 0.00 0.00 0.00 5.10
101 105 9.369904 CTTTGAACCAATATCTATTTGGGTTTG 57.630 33.333 7.32 0.00 34.20 2.93
129 133 9.733556 TGAGTGAATTGCTTTAGGTTATCTTTA 57.266 29.630 0.00 0.00 0.00 1.85
269 273 6.127758 TGGCGAAATTTTGCTAGATGTTGTAT 60.128 34.615 25.84 0.00 37.71 2.29
301 305 2.341257 GCACACACCTCTACAGATGTG 58.659 52.381 11.64 11.64 46.32 3.21
386 393 7.931578 ATTTTACCTTGAAATGACATCCGTA 57.068 32.000 0.00 0.00 0.00 4.02
403 410 4.082463 TCGAACATCCTGCCAAATTTTACC 60.082 41.667 0.00 0.00 0.00 2.85
410 417 4.599047 AATTTTCGAACATCCTGCCAAA 57.401 36.364 0.00 0.00 0.00 3.28
465 472 4.277174 ACACCGCATGAACAGTAAATTCAA 59.723 37.500 0.00 0.00 39.43 2.69
466 473 3.818210 ACACCGCATGAACAGTAAATTCA 59.182 39.130 0.00 0.00 40.25 2.57
497 505 3.499918 GGACATGAATAATCTGCTTCCGG 59.500 47.826 0.00 0.00 0.00 5.14
512 520 0.465705 GGCATCTTCGAGGGACATGA 59.534 55.000 0.00 0.00 0.00 3.07
523 531 3.873952 GTCACCAAGAGTATGGCATCTTC 59.126 47.826 1.65 2.92 44.75 2.87
528 536 2.371841 AGTTGTCACCAAGAGTATGGCA 59.628 45.455 0.00 0.00 44.75 4.92
549 557 1.977854 ACTGTGACTGATGGCCTACAA 59.022 47.619 3.32 0.00 0.00 2.41
550 558 1.276138 CACTGTGACTGATGGCCTACA 59.724 52.381 3.32 3.01 0.00 2.74
603 612 5.321102 AGCAGTTGGTTATGTTGGTTATGA 58.679 37.500 0.00 0.00 0.00 2.15
609 618 5.446143 TGTTTAGCAGTTGGTTATGTTGG 57.554 39.130 0.00 0.00 0.00 3.77
637 646 1.372623 GTCACTTCGTGGTCCGGAC 60.373 63.158 27.04 27.04 37.11 4.79
674 685 1.666553 CACTGCAAGGCGGTCGTTA 60.667 57.895 0.00 0.00 45.94 3.18
680 691 1.331756 GTGAATATCACTGCAAGGCGG 59.668 52.381 3.31 0.00 43.73 6.13
698 709 4.190304 TGATCGTCGTTGTTTCTTTGTG 57.810 40.909 0.00 0.00 0.00 3.33
794 806 9.337396 GGTTTGTTTATTTCCTTGAGGATTTTT 57.663 29.630 0.00 0.00 44.98 1.94
807 819 8.986477 AGATTATGCACTGGTTTGTTTATTTC 57.014 30.769 0.00 0.00 0.00 2.17
812 824 5.105756 GCCTAGATTATGCACTGGTTTGTTT 60.106 40.000 0.00 0.00 0.00 2.83
813 825 4.399303 GCCTAGATTATGCACTGGTTTGTT 59.601 41.667 0.00 0.00 0.00 2.83
814 826 3.947834 GCCTAGATTATGCACTGGTTTGT 59.052 43.478 0.00 0.00 0.00 2.83
815 827 3.316308 GGCCTAGATTATGCACTGGTTTG 59.684 47.826 0.00 0.00 0.00 2.93
901 919 2.552599 TGCCAGTGTTTAACGATCCA 57.447 45.000 0.00 0.00 0.00 3.41
976 996 2.422519 GGAGTAGATCGGGAGTGTGGTA 60.423 54.545 0.00 0.00 0.00 3.25
979 999 1.033574 GGGAGTAGATCGGGAGTGTG 58.966 60.000 0.00 0.00 0.00 3.82
980 1000 0.106116 GGGGAGTAGATCGGGAGTGT 60.106 60.000 0.00 0.00 0.00 3.55
981 1001 0.106167 TGGGGAGTAGATCGGGAGTG 60.106 60.000 0.00 0.00 0.00 3.51
982 1002 0.186386 CTGGGGAGTAGATCGGGAGT 59.814 60.000 0.00 0.00 0.00 3.85
983 1003 0.478942 TCTGGGGAGTAGATCGGGAG 59.521 60.000 0.00 0.00 0.00 4.30
984 1004 1.075698 GATCTGGGGAGTAGATCGGGA 59.924 57.143 0.00 0.00 40.62 5.14
985 1005 1.551452 GATCTGGGGAGTAGATCGGG 58.449 60.000 0.00 0.00 40.62 5.14
988 1008 0.892063 GCCGATCTGGGGAGTAGATC 59.108 60.000 0.00 0.00 44.46 2.75
989 1009 0.485099 AGCCGATCTGGGGAGTAGAT 59.515 55.000 5.87 0.00 37.59 1.98
990 1010 0.261991 AAGCCGATCTGGGGAGTAGA 59.738 55.000 5.87 0.00 38.63 2.59
991 1011 0.676736 GAAGCCGATCTGGGGAGTAG 59.323 60.000 5.87 0.00 38.63 2.57
992 1012 0.759436 GGAAGCCGATCTGGGGAGTA 60.759 60.000 5.87 0.00 38.63 2.59
993 1013 2.066999 GGAAGCCGATCTGGGGAGT 61.067 63.158 5.87 0.00 38.63 3.85
994 1014 2.825264 GGAAGCCGATCTGGGGAG 59.175 66.667 5.87 0.00 38.63 4.30
1112 1132 3.470888 ATGTTCGAGGCGGGAGGG 61.471 66.667 0.00 0.00 0.00 4.30
1113 1133 2.202932 CATGTTCGAGGCGGGAGG 60.203 66.667 0.00 0.00 0.00 4.30
1114 1134 2.202932 CCATGTTCGAGGCGGGAG 60.203 66.667 0.00 0.00 0.00 4.30
1115 1135 4.467084 GCCATGTTCGAGGCGGGA 62.467 66.667 0.00 0.00 41.70 5.14
1120 1140 2.892425 GAGCCGCCATGTTCGAGG 60.892 66.667 6.23 0.00 0.00 4.63
1121 1141 2.169789 CAGAGCCGCCATGTTCGAG 61.170 63.158 6.23 0.00 0.00 4.04
1122 1142 2.125552 CAGAGCCGCCATGTTCGA 60.126 61.111 6.23 0.00 0.00 3.71
1123 1143 3.869272 GCAGAGCCGCCATGTTCG 61.869 66.667 0.00 0.00 0.00 3.95
1124 1144 2.437359 AGCAGAGCCGCCATGTTC 60.437 61.111 0.00 0.00 0.00 3.18
1239 1262 0.390860 GCAGGCAGGTCTCATACGAT 59.609 55.000 0.00 0.00 0.00 3.73
1262 1285 0.182775 CGAAGGGTAAATGGAGGGGG 59.817 60.000 0.00 0.00 0.00 5.40
1280 1303 3.130693 AGATACGAAGAGAGGGGAAAACG 59.869 47.826 0.00 0.00 0.00 3.60
1281 1304 4.739587 AGATACGAAGAGAGGGGAAAAC 57.260 45.455 0.00 0.00 0.00 2.43
1282 1305 5.360144 CAGTAGATACGAAGAGAGGGGAAAA 59.640 44.000 0.00 0.00 0.00 2.29
1286 1309 3.822940 ACAGTAGATACGAAGAGAGGGG 58.177 50.000 0.00 0.00 0.00 4.79
1287 1310 5.613329 AGTACAGTAGATACGAAGAGAGGG 58.387 45.833 0.00 0.00 0.00 4.30
1288 1311 8.308931 AGATAGTACAGTAGATACGAAGAGAGG 58.691 40.741 0.00 0.00 0.00 3.69
1301 1325 5.299148 AGCCACGACTAGATAGTACAGTAG 58.701 45.833 0.00 0.00 36.50 2.57
1304 1328 5.299148 ACTAGCCACGACTAGATAGTACAG 58.701 45.833 15.40 0.00 41.92 2.74
1305 1329 5.287674 ACTAGCCACGACTAGATAGTACA 57.712 43.478 15.40 0.00 41.92 2.90
1306 1330 6.313411 CCATACTAGCCACGACTAGATAGTAC 59.687 46.154 15.40 0.00 41.92 2.73
1329 1353 1.354101 TAAACCTCGCTTCTTCCCCA 58.646 50.000 0.00 0.00 0.00 4.96
1513 1537 4.877823 TGACATGGCAAATGAGATACAGAC 59.122 41.667 0.00 0.00 0.00 3.51
1572 1597 1.605710 GAAGCACGCATCAGGCATAAT 59.394 47.619 0.00 0.00 45.17 1.28
1634 1659 3.994392 GCGAAACTAAAGTGTGGAGATCA 59.006 43.478 0.00 0.00 0.00 2.92
1649 1674 1.668151 GCTGGTTCTCCGCGAAACT 60.668 57.895 8.23 0.00 40.11 2.66
1722 1747 8.567285 ACAGGAAAACAAACAGATAATAGGAG 57.433 34.615 0.00 0.00 0.00 3.69
1746 1771 4.016113 AGCACTTGTGTTTTCTCGAAAC 57.984 40.909 2.61 0.00 46.28 2.78
1764 1789 2.935849 CGGTGCATCTATACACAAAGCA 59.064 45.455 0.00 0.00 38.57 3.91
1784 1809 1.603802 ACCACATTTTGCACACTCTCG 59.396 47.619 0.00 0.00 0.00 4.04
1790 1815 0.533951 TGCACACCACATTTTGCACA 59.466 45.000 0.00 0.00 40.01 4.57
1805 1832 0.524862 CCTGTCAGCTTGGATTGCAC 59.475 55.000 0.00 0.00 0.00 4.57
1807 1834 1.093159 CTCCTGTCAGCTTGGATTGC 58.907 55.000 0.00 0.00 0.00 3.56
1818 1845 1.080907 TGGGATCAGCCTCCTGTCA 59.919 57.895 0.00 0.00 40.09 3.58
1839 1866 6.073112 TGCGTTTAGGGTTTAATCTTGTGTAC 60.073 38.462 0.00 0.00 0.00 2.90
1915 1942 5.291858 GCATCAGACATGTCTCGATTAACAA 59.708 40.000 25.58 4.61 37.98 2.83
2019 2046 3.579709 AGACATAACTCTTGACAGCACG 58.420 45.455 0.00 0.00 0.00 5.34
2065 2092 7.235804 AGGCAAAGTAGTCAAATTAGGGTAAA 58.764 34.615 0.00 0.00 0.00 2.01
2067 2094 6.382919 AGGCAAAGTAGTCAAATTAGGGTA 57.617 37.500 0.00 0.00 0.00 3.69
2160 2187 5.931724 TGAAGTTTAAAGATCATCGCACTGA 59.068 36.000 0.00 0.00 0.00 3.41
2166 2193 8.499162 ACAGACTTTGAAGTTTAAAGATCATCG 58.501 33.333 22.79 12.49 39.88 3.84
2176 2203 7.054124 ACAGGATTCACAGACTTTGAAGTTTA 58.946 34.615 9.73 0.00 39.88 2.01
2178 2205 5.440610 ACAGGATTCACAGACTTTGAAGTT 58.559 37.500 9.73 0.00 39.88 2.66
2179 2206 5.041191 ACAGGATTCACAGACTTTGAAGT 57.959 39.130 9.73 0.00 43.16 3.01
2180 2207 7.148340 GGATAACAGGATTCACAGACTTTGAAG 60.148 40.741 9.73 0.00 36.44 3.02
2181 2208 6.655003 GGATAACAGGATTCACAGACTTTGAA 59.345 38.462 6.51 6.51 37.38 2.69
2698 2726 7.799784 AGAAACATTGATTTGCAAATGTAAGC 58.200 30.769 28.67 14.23 40.48 3.09
2850 2878 1.911357 AGACATGAGGCAACATCCAGA 59.089 47.619 0.00 0.00 41.41 3.86
2892 2920 9.661954 AGATATCTTAGGACTTGGAGACATAAA 57.338 33.333 0.00 0.00 42.32 1.40
3110 3139 5.811613 ACATATGTGCAATAATGTGTTTGCC 59.188 36.000 7.78 0.00 45.94 4.52
3385 3414 9.685276 TTATGGAATGTAGACATCAATGTTTCT 57.315 29.630 0.00 0.00 41.95 2.52
3386 3415 9.722056 GTTATGGAATGTAGACATCAATGTTTC 57.278 33.333 0.00 0.00 41.95 2.78
3390 3419 7.521099 GCAGGTTATGGAATGTAGACATCAATG 60.521 40.741 0.00 0.00 35.10 2.82
3635 3664 4.800784 GACTTCAGTCACTGAGAGGTAAC 58.199 47.826 7.75 0.00 41.75 2.50
3764 3793 4.193865 GCATTGGCCTTGCTGAAATAAAT 58.806 39.130 20.04 0.00 37.14 1.40
3863 3892 5.291971 AGCCATGCTTTAACAGAAACAAAG 58.708 37.500 0.00 0.00 33.89 2.77
3873 3902 3.682372 GCTACAGAGCCATGCTTTAAC 57.318 47.619 0.00 0.00 43.49 2.01
4121 4153 4.840680 AGCATCACAGATTAGGGCATAGTA 59.159 41.667 0.00 0.00 0.00 1.82
4169 4201 4.422840 TGATGTTGCTTGTGAAAACTGTG 58.577 39.130 0.00 0.00 0.00 3.66
4171 4203 4.675510 ACTGATGTTGCTTGTGAAAACTG 58.324 39.130 0.00 0.00 0.00 3.16
4183 4215 5.050091 CCCAACGATAGAATACTGATGTTGC 60.050 44.000 0.00 0.00 41.38 4.17
4241 4273 7.283354 AGGAAACCTAGACAAGAAGAACAAAAG 59.717 37.037 0.00 0.00 28.47 2.27
4242 4274 7.116736 AGGAAACCTAGACAAGAAGAACAAAA 58.883 34.615 0.00 0.00 28.47 2.44
4329 4361 6.500589 ACCTTGAAATTAGGATAGCTGCTA 57.499 37.500 12.40 12.40 36.58 3.49
4402 4434 5.674525 TGCAAAGATATAGTGCTTAGCAGT 58.325 37.500 18.99 18.99 44.89 4.40
4671 4745 7.982354 ACCAAATAAAAACCACGATGAAAAAGA 59.018 29.630 0.00 0.00 0.00 2.52
4826 4900 3.181478 GGAGGGAGTACTACCGAATTGTG 60.181 52.174 18.87 0.00 39.08 3.33
4844 4918 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
4845 4919 3.581755 TGACAAGTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
4846 4920 3.663995 TGACAAGTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
4847 4921 3.930229 TGATGACAAGTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
4848 4922 5.524511 TTGATGACAAGTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
4849 4923 7.201350 GCATTTTGATGACAAGTATTTTCGGAC 60.201 37.037 0.00 0.00 37.32 4.79
4850 4924 6.806249 GCATTTTGATGACAAGTATTTTCGGA 59.194 34.615 0.00 0.00 37.32 4.55
4851 4925 6.585702 TGCATTTTGATGACAAGTATTTTCGG 59.414 34.615 0.00 0.00 37.32 4.30
4852 4926 7.565450 TGCATTTTGATGACAAGTATTTTCG 57.435 32.000 0.00 0.00 37.32 3.46
4856 4930 8.776470 CCTTTTTGCATTTTGATGACAAGTATT 58.224 29.630 0.00 0.00 37.32 1.89
4857 4931 7.388500 CCCTTTTTGCATTTTGATGACAAGTAT 59.612 33.333 0.00 0.00 37.32 2.12
4858 4932 6.705381 CCCTTTTTGCATTTTGATGACAAGTA 59.295 34.615 0.00 0.00 37.32 2.24
4859 4933 5.528320 CCCTTTTTGCATTTTGATGACAAGT 59.472 36.000 0.00 0.00 37.32 3.16
4860 4934 5.759273 TCCCTTTTTGCATTTTGATGACAAG 59.241 36.000 0.00 0.00 37.32 3.16
4861 4935 5.678583 TCCCTTTTTGCATTTTGATGACAA 58.321 33.333 0.00 0.00 0.00 3.18
4862 4936 5.287674 TCCCTTTTTGCATTTTGATGACA 57.712 34.783 0.00 0.00 0.00 3.58
4863 4937 5.702209 ACATCCCTTTTTGCATTTTGATGAC 59.298 36.000 14.46 0.00 34.11 3.06
4864 4938 5.867330 ACATCCCTTTTTGCATTTTGATGA 58.133 33.333 14.46 0.00 34.11 2.92
4865 4939 7.767198 AGATACATCCCTTTTTGCATTTTGATG 59.233 33.333 0.00 0.00 35.62 3.07
4866 4940 7.854337 AGATACATCCCTTTTTGCATTTTGAT 58.146 30.769 0.00 0.00 0.00 2.57
4867 4941 7.243604 AGATACATCCCTTTTTGCATTTTGA 57.756 32.000 0.00 0.00 0.00 2.69
4868 4942 9.434420 TTTAGATACATCCCTTTTTGCATTTTG 57.566 29.630 0.00 0.00 0.00 2.44
4870 4944 9.435688 GTTTTAGATACATCCCTTTTTGCATTT 57.564 29.630 0.00 0.00 0.00 2.32
4871 4945 8.815912 AGTTTTAGATACATCCCTTTTTGCATT 58.184 29.630 0.00 0.00 0.00 3.56
4872 4946 8.366359 AGTTTTAGATACATCCCTTTTTGCAT 57.634 30.769 0.00 0.00 0.00 3.96
4873 4947 7.775053 AGTTTTAGATACATCCCTTTTTGCA 57.225 32.000 0.00 0.00 0.00 4.08
4913 4987 9.657419 GTCATCAAAATGAATAAAAGGGAATGT 57.343 29.630 0.00 0.00 43.42 2.71
4914 4988 9.656040 TGTCATCAAAATGAATAAAAGGGAATG 57.344 29.630 0.00 0.00 43.42 2.67
4916 4990 9.709495 CTTGTCATCAAAATGAATAAAAGGGAA 57.291 29.630 0.00 0.00 43.42 3.97
4917 4991 8.869109 ACTTGTCATCAAAATGAATAAAAGGGA 58.131 29.630 0.00 0.00 43.42 4.20
4925 4999 7.975616 CCGGAAATACTTGTCATCAAAATGAAT 59.024 33.333 0.00 0.00 43.42 2.57
4926 5000 7.175816 TCCGGAAATACTTGTCATCAAAATGAA 59.824 33.333 0.00 0.00 43.42 2.57
4927 5001 6.657117 TCCGGAAATACTTGTCATCAAAATGA 59.343 34.615 0.00 0.00 39.63 2.57
4928 5002 6.747280 GTCCGGAAATACTTGTCATCAAAATG 59.253 38.462 5.23 0.00 32.87 2.32
4929 5003 6.403200 CGTCCGGAAATACTTGTCATCAAAAT 60.403 38.462 5.23 0.00 32.87 1.82
4930 5004 5.106869 CGTCCGGAAATACTTGTCATCAAAA 60.107 40.000 5.23 0.00 32.87 2.44
4931 5005 4.390603 CGTCCGGAAATACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
4932 5006 3.930229 CGTCCGGAAATACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
4933 5007 3.517602 CGTCCGGAAATACTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
4934 5008 2.864343 CCGTCCGGAAATACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
4935 5009 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
4936 5010 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
4937 5011 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
4938 5012 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
4939 5013 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
4940 5014 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
4941 5015 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
4942 5016 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
4943 5017 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
4944 5018 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
4945 5019 0.967380 GTACTCCCTCCGTCCGGAAA 60.967 60.000 5.23 0.00 44.66 3.13
4946 5020 1.379044 GTACTCCCTCCGTCCGGAA 60.379 63.158 5.23 0.00 44.66 4.30
4947 5021 2.262774 GAGTACTCCCTCCGTCCGGA 62.263 65.000 12.13 0.00 42.90 5.14
4948 5022 1.823041 GAGTACTCCCTCCGTCCGG 60.823 68.421 12.13 0.00 0.00 5.14
4949 5023 0.679002 TTGAGTACTCCCTCCGTCCG 60.679 60.000 20.11 0.00 0.00 4.79
4950 5024 1.777941 ATTGAGTACTCCCTCCGTCC 58.222 55.000 20.11 0.00 0.00 4.79
4951 5025 2.159085 CCAATTGAGTACTCCCTCCGTC 60.159 54.545 20.11 0.00 0.00 4.79
4952 5026 1.831736 CCAATTGAGTACTCCCTCCGT 59.168 52.381 20.11 0.00 0.00 4.69
4953 5027 2.101582 CTCCAATTGAGTACTCCCTCCG 59.898 54.545 20.11 5.36 36.27 4.63
4954 5028 2.436173 CCTCCAATTGAGTACTCCCTCC 59.564 54.545 20.11 0.00 39.65 4.30
4955 5029 3.375699 TCCTCCAATTGAGTACTCCCTC 58.624 50.000 20.11 0.00 39.65 4.30
4956 5030 3.491766 TCCTCCAATTGAGTACTCCCT 57.508 47.619 20.11 4.48 39.65 4.20
4957 5031 3.118223 CCTTCCTCCAATTGAGTACTCCC 60.118 52.174 20.11 0.00 39.65 4.30
4958 5032 3.682999 GCCTTCCTCCAATTGAGTACTCC 60.683 52.174 20.11 3.06 39.65 3.85
4959 5033 3.055094 TGCCTTCCTCCAATTGAGTACTC 60.055 47.826 16.32 16.32 39.65 2.59
4960 5034 2.912956 TGCCTTCCTCCAATTGAGTACT 59.087 45.455 7.12 0.00 39.65 2.73
4961 5035 3.274288 CTGCCTTCCTCCAATTGAGTAC 58.726 50.000 7.12 0.00 39.65 2.73
4962 5036 2.912956 ACTGCCTTCCTCCAATTGAGTA 59.087 45.455 7.12 0.00 39.65 2.59
4963 5037 1.707427 ACTGCCTTCCTCCAATTGAGT 59.293 47.619 7.12 0.00 39.65 3.41
4964 5038 2.503895 ACTGCCTTCCTCCAATTGAG 57.496 50.000 7.12 2.57 41.07 3.02
4965 5039 2.239654 CCTACTGCCTTCCTCCAATTGA 59.760 50.000 7.12 0.00 0.00 2.57
4966 5040 2.239654 TCCTACTGCCTTCCTCCAATTG 59.760 50.000 0.00 0.00 0.00 2.32
5007 5081 5.964958 TTCAAAGAAGGTCATTTGCCTAG 57.035 39.130 0.00 0.00 36.55 3.02
5042 5116 5.222484 TGGGACGGAGGGAGTATATTAGATT 60.222 44.000 0.00 0.00 0.00 2.40
5051 5125 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
5052 5126 1.004394 GAATTTTGGGACGGAGGGAGT 59.996 52.381 0.00 0.00 0.00 3.85
5053 5127 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
5054 5128 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
5055 5129 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
5056 5130 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
5057 5131 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
5058 5132 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
5059 5133 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
5060 5134 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
5061 5135 8.360390 ACAAATCTAAGACAAGAATTTTGGGAC 58.640 33.333 0.00 0.00 33.04 4.46
5062 5136 8.477419 ACAAATCTAAGACAAGAATTTTGGGA 57.523 30.769 0.00 0.00 33.04 4.37
5063 5137 8.579863 AGACAAATCTAAGACAAGAATTTTGGG 58.420 33.333 0.00 0.00 33.04 4.12
5069 5143 9.323985 GCATCTAGACAAATCTAAGACAAGAAT 57.676 33.333 0.00 0.00 36.98 2.40
5070 5144 7.489435 CGCATCTAGACAAATCTAAGACAAGAA 59.511 37.037 0.00 0.00 36.98 2.52
5071 5145 6.975197 CGCATCTAGACAAATCTAAGACAAGA 59.025 38.462 0.00 0.00 36.98 3.02
5072 5146 6.199908 CCGCATCTAGACAAATCTAAGACAAG 59.800 42.308 0.00 0.00 36.98 3.16
5073 5147 6.042777 CCGCATCTAGACAAATCTAAGACAA 58.957 40.000 0.00 0.00 36.98 3.18
5074 5148 5.359860 TCCGCATCTAGACAAATCTAAGACA 59.640 40.000 0.00 0.00 36.98 3.41
5075 5149 5.833082 TCCGCATCTAGACAAATCTAAGAC 58.167 41.667 0.00 0.00 36.98 3.01
5076 5150 6.040955 ACATCCGCATCTAGACAAATCTAAGA 59.959 38.462 0.00 0.00 36.98 2.10
5077 5151 6.219473 ACATCCGCATCTAGACAAATCTAAG 58.781 40.000 0.00 0.00 36.98 2.18
5078 5152 6.161855 ACATCCGCATCTAGACAAATCTAA 57.838 37.500 0.00 0.00 36.98 2.10
5079 5153 5.791336 ACATCCGCATCTAGACAAATCTA 57.209 39.130 0.00 0.00 36.29 1.98
5080 5154 4.679373 ACATCCGCATCTAGACAAATCT 57.321 40.909 0.00 0.00 39.15 2.40
5081 5155 4.686554 GGTACATCCGCATCTAGACAAATC 59.313 45.833 0.00 0.00 0.00 2.17
5082 5156 4.345257 AGGTACATCCGCATCTAGACAAAT 59.655 41.667 0.00 0.00 41.99 2.32
5083 5157 3.704566 AGGTACATCCGCATCTAGACAAA 59.295 43.478 0.00 0.00 41.99 2.83
5084 5158 3.296854 AGGTACATCCGCATCTAGACAA 58.703 45.455 0.00 0.00 41.99 3.18
5085 5159 2.945456 AGGTACATCCGCATCTAGACA 58.055 47.619 0.00 0.00 41.99 3.41
5086 5160 5.646577 ATTAGGTACATCCGCATCTAGAC 57.353 43.478 0.00 0.00 41.99 2.59
5087 5161 6.482524 AGTATTAGGTACATCCGCATCTAGA 58.517 40.000 0.00 0.00 41.99 2.43
5088 5162 6.761099 AGTATTAGGTACATCCGCATCTAG 57.239 41.667 0.00 0.00 41.99 2.43
5089 5163 8.640063 TTTAGTATTAGGTACATCCGCATCTA 57.360 34.615 0.00 0.00 41.99 1.98
5090 5164 7.534723 TTTAGTATTAGGTACATCCGCATCT 57.465 36.000 0.00 0.00 41.99 2.90
5091 5165 7.148853 CGTTTTAGTATTAGGTACATCCGCATC 60.149 40.741 0.00 0.00 41.99 3.91
5092 5166 6.643770 CGTTTTAGTATTAGGTACATCCGCAT 59.356 38.462 0.00 0.00 41.99 4.73
5093 5167 5.978919 CGTTTTAGTATTAGGTACATCCGCA 59.021 40.000 0.00 0.00 41.99 5.69
5094 5168 5.979517 ACGTTTTAGTATTAGGTACATCCGC 59.020 40.000 0.00 0.00 41.99 5.54
5095 5169 7.166473 GTCACGTTTTAGTATTAGGTACATCCG 59.834 40.741 0.00 0.00 41.99 4.18
5096 5170 8.193438 AGTCACGTTTTAGTATTAGGTACATCC 58.807 37.037 0.00 0.00 35.67 3.51
5097 5171 9.578439 AAGTCACGTTTTAGTATTAGGTACATC 57.422 33.333 0.00 0.00 35.67 3.06
5098 5172 9.362539 CAAGTCACGTTTTAGTATTAGGTACAT 57.637 33.333 0.00 0.00 35.67 2.29
5099 5173 8.575589 TCAAGTCACGTTTTAGTATTAGGTACA 58.424 33.333 0.00 0.00 35.67 2.90
5100 5174 8.970691 TCAAGTCACGTTTTAGTATTAGGTAC 57.029 34.615 0.00 0.00 0.00 3.34
5102 5176 9.578439 GTATCAAGTCACGTTTTAGTATTAGGT 57.422 33.333 0.00 0.00 0.00 3.08
5103 5177 9.577110 TGTATCAAGTCACGTTTTAGTATTAGG 57.423 33.333 0.00 0.00 0.00 2.69
5106 5180 9.095065 GGATGTATCAAGTCACGTTTTAGTATT 57.905 33.333 0.00 0.00 0.00 1.89
5107 5181 7.434307 CGGATGTATCAAGTCACGTTTTAGTAT 59.566 37.037 0.00 0.00 0.00 2.12
5108 5182 6.748658 CGGATGTATCAAGTCACGTTTTAGTA 59.251 38.462 0.00 0.00 0.00 1.82
5109 5183 5.575606 CGGATGTATCAAGTCACGTTTTAGT 59.424 40.000 0.00 0.00 0.00 2.24
5110 5184 5.575606 ACGGATGTATCAAGTCACGTTTTAG 59.424 40.000 0.00 0.00 0.00 1.85
5111 5185 5.472148 ACGGATGTATCAAGTCACGTTTTA 58.528 37.500 0.00 0.00 0.00 1.52
5112 5186 4.312443 ACGGATGTATCAAGTCACGTTTT 58.688 39.130 0.00 0.00 0.00 2.43
5113 5187 3.921677 ACGGATGTATCAAGTCACGTTT 58.078 40.909 0.00 0.00 0.00 3.60
5114 5188 3.587797 ACGGATGTATCAAGTCACGTT 57.412 42.857 0.00 0.00 0.00 3.99
5115 5189 4.913335 ATACGGATGTATCAAGTCACGT 57.087 40.909 0.00 0.00 36.56 4.49
5116 5190 7.113124 GTCTAAATACGGATGTATCAAGTCACG 59.887 40.741 0.00 0.00 40.42 4.35
5117 5191 7.113124 CGTCTAAATACGGATGTATCAAGTCAC 59.887 40.741 0.00 0.00 40.42 3.67
5118 5192 7.012610 TCGTCTAAATACGGATGTATCAAGTCA 59.987 37.037 0.00 0.00 40.42 3.41
5119 5193 7.358066 TCGTCTAAATACGGATGTATCAAGTC 58.642 38.462 0.00 0.00 40.42 3.01
5120 5194 7.268199 TCGTCTAAATACGGATGTATCAAGT 57.732 36.000 0.00 0.00 40.42 3.16
5121 5195 8.744008 ATTCGTCTAAATACGGATGTATCAAG 57.256 34.615 0.00 0.00 39.60 3.02
5122 5196 8.573885 AGATTCGTCTAAATACGGATGTATCAA 58.426 33.333 0.00 0.00 41.14 2.57
5123 5197 8.107399 AGATTCGTCTAAATACGGATGTATCA 57.893 34.615 0.00 0.00 41.14 2.15
5126 5200 9.276590 TCTTAGATTCGTCTAAATACGGATGTA 57.723 33.333 0.00 0.00 41.14 2.29
5127 5201 8.074972 GTCTTAGATTCGTCTAAATACGGATGT 58.925 37.037 0.00 0.00 41.14 3.06
5128 5202 8.074370 TGTCTTAGATTCGTCTAAATACGGATG 58.926 37.037 0.00 0.00 41.14 3.51
5129 5203 8.162878 TGTCTTAGATTCGTCTAAATACGGAT 57.837 34.615 0.00 0.00 43.73 4.18
5130 5204 7.558161 TGTCTTAGATTCGTCTAAATACGGA 57.442 36.000 0.00 0.00 43.05 4.69
5131 5205 8.127327 TCTTGTCTTAGATTCGTCTAAATACGG 58.873 37.037 0.00 0.99 43.05 4.02
5132 5206 9.499585 TTCTTGTCTTAGATTCGTCTAAATACG 57.500 33.333 0.26 0.00 44.19 3.06
5138 5212 9.151471 CCAAAATTCTTGTCTTAGATTCGTCTA 57.849 33.333 0.00 0.00 0.00 2.59
5139 5213 7.119846 CCCAAAATTCTTGTCTTAGATTCGTCT 59.880 37.037 0.00 0.00 0.00 4.18
5140 5214 7.119262 TCCCAAAATTCTTGTCTTAGATTCGTC 59.881 37.037 0.00 0.00 0.00 4.20
5141 5215 6.940298 TCCCAAAATTCTTGTCTTAGATTCGT 59.060 34.615 0.00 0.00 0.00 3.85
5142 5216 7.244192 GTCCCAAAATTCTTGTCTTAGATTCG 58.756 38.462 0.00 0.00 0.00 3.34
5143 5217 7.244192 CGTCCCAAAATTCTTGTCTTAGATTC 58.756 38.462 0.00 0.00 0.00 2.52
5144 5218 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
5145 5219 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
5146 5220 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
5147 5221 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
5148 5222 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
5149 5223 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
5150 5224 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
5151 5225 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
5152 5226 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
5153 5227 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
5154 5228 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
5155 5229 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
5156 5230 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
5157 5231 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
5158 5232 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
5159 5233 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
5160 5234 0.906282 GGTACTCCCTCCGTCCCAAA 60.906 60.000 0.00 0.00 0.00 3.28
5161 5235 1.305549 GGTACTCCCTCCGTCCCAA 60.306 63.158 0.00 0.00 0.00 4.12
5162 5236 2.243888 AGGTACTCCCTCCGTCCCA 61.244 63.158 0.00 0.00 40.71 4.37
5163 5237 1.757340 CAGGTACTCCCTCCGTCCC 60.757 68.421 0.00 0.00 43.86 4.46
5164 5238 1.000107 ACAGGTACTCCCTCCGTCC 60.000 63.158 0.00 0.00 43.86 4.79
5165 5239 0.323178 TGACAGGTACTCCCTCCGTC 60.323 60.000 0.00 0.00 43.86 4.79
5166 5240 0.113776 TTGACAGGTACTCCCTCCGT 59.886 55.000 0.00 0.00 43.86 4.69
5167 5241 0.818296 CTTGACAGGTACTCCCTCCG 59.182 60.000 0.00 0.00 43.86 4.63
5168 5242 2.104170 CTCTTGACAGGTACTCCCTCC 58.896 57.143 0.00 0.00 43.86 4.30
5169 5243 1.478916 GCTCTTGACAGGTACTCCCTC 59.521 57.143 0.00 0.00 43.86 4.30
5171 5245 1.562783 AGCTCTTGACAGGTACTCCC 58.437 55.000 0.00 0.00 34.60 4.30
5172 5246 3.510360 TGTTAGCTCTTGACAGGTACTCC 59.490 47.826 0.00 0.00 34.60 3.85
5173 5247 4.785511 TGTTAGCTCTTGACAGGTACTC 57.214 45.455 0.00 0.00 34.60 2.59
5174 5248 4.021016 CCTTGTTAGCTCTTGACAGGTACT 60.021 45.833 0.00 0.00 43.88 2.73
5175 5249 4.246458 CCTTGTTAGCTCTTGACAGGTAC 58.754 47.826 0.00 0.00 0.00 3.34
5419 5509 2.512745 TAATTGCCGTGGCGCGAT 60.513 55.556 23.75 4.46 45.51 4.58
5691 5781 6.093495 TGTCATCAAAATGGATAAACGGAGAC 59.907 38.462 0.00 0.00 33.42 3.36
5694 5784 6.432783 ACTTGTCATCAAAATGGATAAACGGA 59.567 34.615 0.00 0.00 33.42 4.69
5696 5786 9.787532 AATACTTGTCATCAAAATGGATAAACG 57.212 29.630 0.00 0.00 33.42 3.60
5797 8460 9.447157 TTTGTCTTTTTGGATTTCAAATGAACT 57.553 25.926 0.00 0.00 43.95 3.01
5818 8481 6.238402 GCTCCCTCCGTTTCTAAATATTTGTC 60.238 42.308 11.05 0.00 0.00 3.18
5821 8484 5.589050 GTGCTCCCTCCGTTTCTAAATATTT 59.411 40.000 5.89 5.89 0.00 1.40
5822 8485 5.123936 GTGCTCCCTCCGTTTCTAAATATT 58.876 41.667 0.00 0.00 0.00 1.28
5831 8494 1.600916 GCTTGTGCTCCCTCCGTTT 60.601 57.895 0.00 0.00 36.03 3.60
5836 8499 2.338785 GCTTGGCTTGTGCTCCCTC 61.339 63.158 0.00 0.00 39.59 4.30
5871 8534 4.176271 GCATGCATAAAAGAAACCCACTC 58.824 43.478 14.21 0.00 0.00 3.51
5890 8553 0.779997 ACCTGAAGGAACAAGGGCAT 59.220 50.000 2.62 0.00 38.94 4.40
5892 8555 0.110486 TGACCTGAAGGAACAAGGGC 59.890 55.000 2.62 0.00 38.94 5.19
5893 8556 2.656947 TTGACCTGAAGGAACAAGGG 57.343 50.000 2.62 0.00 38.94 3.95
5894 8557 4.584325 TGAATTTGACCTGAAGGAACAAGG 59.416 41.667 2.62 0.00 36.82 3.61
5895 8558 5.772825 TGAATTTGACCTGAAGGAACAAG 57.227 39.130 2.62 0.00 36.82 3.16
5896 8559 6.537453 TTTGAATTTGACCTGAAGGAACAA 57.463 33.333 2.62 6.51 38.94 2.83
5897 8560 6.239289 GGATTTGAATTTGACCTGAAGGAACA 60.239 38.462 2.62 0.36 38.94 3.18
5898 8561 6.015095 AGGATTTGAATTTGACCTGAAGGAAC 60.015 38.462 2.62 0.00 38.94 3.62
5912 8588 0.614415 TGGCCGGCAGGATTTGAATT 60.614 50.000 30.85 0.00 41.02 2.17
5931 8607 6.073765 CGTTAGCCACTGATAAAATAATCGCT 60.074 38.462 0.00 0.00 0.00 4.93
5948 8624 5.425196 AAGGGAATAGTAAACGTTAGCCA 57.575 39.130 0.00 0.00 0.00 4.75
5969 8645 5.741011 AGACGGATAAAATACCAGCTGAAA 58.259 37.500 17.39 2.32 0.00 2.69
5976 8652 8.496707 GTCCTTAAAAGACGGATAAAATACCA 57.503 34.615 0.00 0.00 0.00 3.25
6009 8685 2.319136 ACACAACCAGCGAACACTTA 57.681 45.000 0.00 0.00 0.00 2.24
6014 8690 2.271821 ACAAAACACAACCAGCGAAC 57.728 45.000 0.00 0.00 0.00 3.95
6017 8693 3.684103 TCTAACAAAACACAACCAGCG 57.316 42.857 0.00 0.00 0.00 5.18
6019 8695 6.017770 TCCGTTATCTAACAAAACACAACCAG 60.018 38.462 1.41 0.00 35.99 4.00
6070 8746 9.734620 TTTGAATTATCCGAAGCTATGATTTTG 57.265 29.630 0.00 0.00 0.00 2.44
6084 8762 9.414295 ACATGCATATTGATTTTGAATTATCCG 57.586 29.630 0.00 0.00 0.00 4.18
6115 8793 5.539979 CATCTTCCATCTATCACTGTCCAG 58.460 45.833 0.00 0.00 0.00 3.86
6127 8805 3.201487 TGTTCAGGATGCATCTTCCATCT 59.799 43.478 25.28 10.56 39.19 2.90
6181 9147 4.201990 GGTGACATTGCTGATTGAATCTCC 60.202 45.833 6.73 0.00 0.00 3.71
6218 9184 5.598005 TGCAAATTAATCAGTAATGGAGGGG 59.402 40.000 0.00 0.00 32.47 4.79
6313 9283 5.392380 GCATGCTTACCATATTATGTCTGGC 60.392 44.000 11.37 3.38 33.12 4.85
6315 9285 7.444629 AAGCATGCTTACCATATTATGTCTG 57.555 36.000 31.09 0.00 34.05 3.51
6350 9436 3.865745 GGAACCATCACATTACGTCTCTG 59.134 47.826 0.00 0.00 0.00 3.35
6395 9489 8.774586 GGTAGTGCATGATGGTTAATTAACTAG 58.225 37.037 23.89 10.32 36.47 2.57
6398 9492 6.427150 CGGTAGTGCATGATGGTTAATTAAC 58.573 40.000 18.30 18.30 35.50 2.01
6433 9528 5.638657 CCTCTGATGCTCACTAATTATGCTC 59.361 44.000 0.00 0.00 0.00 4.26
6451 9549 3.068732 GTGATGGTTGATCGATCCTCTGA 59.931 47.826 22.31 0.24 33.17 3.27
6452 9550 3.069300 AGTGATGGTTGATCGATCCTCTG 59.931 47.826 22.31 0.00 33.17 3.35
6453 9551 3.069300 CAGTGATGGTTGATCGATCCTCT 59.931 47.826 22.31 9.00 33.17 3.69
6484 9582 4.680237 CCAAGTGCTCGGCCGACA 62.680 66.667 27.28 23.66 0.00 4.35
6568 9666 1.301401 CCGAAGAACCTGACGGCAA 60.301 57.895 0.00 0.00 38.98 4.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.