Multiple sequence alignment - TraesCS3B01G146800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G146800 chr3B 100.000 2716 0 0 1 2716 136490887 136493602 0.000000e+00 5016
1 TraesCS3B01G146800 chr3B 86.066 244 16 5 1123 1348 136091476 136091719 2.090000e-61 246
2 TraesCS3B01G146800 chr3D 91.849 1374 50 26 854 2196 86357516 86358858 0.000000e+00 1860
3 TraesCS3B01G146800 chr3D 86.728 324 23 14 2382 2694 86371553 86371867 2.590000e-90 342
4 TraesCS3B01G146800 chr3D 88.261 230 20 5 1123 1347 85896550 85896777 4.460000e-68 268
5 TraesCS3B01G146800 chr3D 86.179 246 13 5 1123 1347 86237047 86237292 2.090000e-61 246
6 TraesCS3B01G146800 chr3D 95.890 73 1 1 2256 2328 86362963 86363033 1.710000e-22 117
7 TraesCS3B01G146800 chr7D 91.553 805 52 5 5 805 210129614 210130406 0.000000e+00 1096
8 TraesCS3B01G146800 chr7D 90.920 804 59 3 5 805 208481502 208482294 0.000000e+00 1068
9 TraesCS3B01G146800 chr5A 90.399 802 66 3 4 805 635765701 635764911 0.000000e+00 1044
10 TraesCS3B01G146800 chr7A 90.274 802 67 3 4 805 46910169 46909379 0.000000e+00 1038
11 TraesCS3B01G146800 chrUn 91.071 672 46 3 4 672 305812241 305811581 0.000000e+00 896
12 TraesCS3B01G146800 chr2A 91.071 672 46 3 4 672 22604715 22604055 0.000000e+00 896
13 TraesCS3B01G146800 chr2A 91.071 672 46 3 4 672 22636710 22636050 0.000000e+00 896
14 TraesCS3B01G146800 chr6A 90.448 670 51 5 4 672 52024849 52024192 0.000000e+00 870
15 TraesCS3B01G146800 chr3A 84.167 960 62 35 854 1764 102686142 102687060 0.000000e+00 848
16 TraesCS3B01G146800 chr3A 95.882 170 4 1 1756 1925 102687092 102687258 3.450000e-69 272
17 TraesCS3B01G146800 chr3A 87.395 238 16 8 1123 1347 102554779 102555015 7.460000e-66 261
18 TraesCS3B01G146800 chr3A 92.366 131 7 3 2251 2381 102831387 102831514 1.660000e-42 183
19 TraesCS3B01G146800 chr1A 88.456 667 46 14 7 672 585622626 585623262 0.000000e+00 776
20 TraesCS3B01G146800 chr1A 89.809 471 37 2 335 805 496325383 496324924 6.480000e-166 593
21 TraesCS3B01G146800 chr1A 92.625 339 25 0 4 342 496326325 496325987 3.140000e-134 488
22 TraesCS3B01G146800 chr1A 87.313 134 12 5 1202 1331 124189918 124189786 6.060000e-32 148
23 TraesCS3B01G146800 chr5B 92.135 267 20 1 539 804 516460091 516460357 2.550000e-100 375
24 TraesCS3B01G146800 chr5B 91.791 268 20 2 539 805 698266566 698266832 3.300000e-99 372
25 TraesCS3B01G146800 chr5B 91.418 268 21 2 539 805 698264279 698264545 1.540000e-97 366
26 TraesCS3B01G146800 chr5B 91.418 268 21 2 539 805 698268853 698269119 1.540000e-97 366
27 TraesCS3B01G146800 chr1B 80.531 226 29 12 1122 1332 174784125 174783900 2.800000e-35 159
28 TraesCS3B01G146800 chr1D 80.269 223 30 12 1122 1331 114083492 114083271 3.620000e-34 156


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G146800 chr3B 136490887 136493602 2715 False 5016.0 5016 100.000000 1 2716 1 chr3B.!!$F2 2715
1 TraesCS3B01G146800 chr3D 86357516 86358858 1342 False 1860.0 1860 91.849000 854 2196 1 chr3D.!!$F3 1342
2 TraesCS3B01G146800 chr7D 210129614 210130406 792 False 1096.0 1096 91.553000 5 805 1 chr7D.!!$F2 800
3 TraesCS3B01G146800 chr7D 208481502 208482294 792 False 1068.0 1068 90.920000 5 805 1 chr7D.!!$F1 800
4 TraesCS3B01G146800 chr5A 635764911 635765701 790 True 1044.0 1044 90.399000 4 805 1 chr5A.!!$R1 801
5 TraesCS3B01G146800 chr7A 46909379 46910169 790 True 1038.0 1038 90.274000 4 805 1 chr7A.!!$R1 801
6 TraesCS3B01G146800 chrUn 305811581 305812241 660 True 896.0 896 91.071000 4 672 1 chrUn.!!$R1 668
7 TraesCS3B01G146800 chr2A 22604055 22604715 660 True 896.0 896 91.071000 4 672 1 chr2A.!!$R1 668
8 TraesCS3B01G146800 chr2A 22636050 22636710 660 True 896.0 896 91.071000 4 672 1 chr2A.!!$R2 668
9 TraesCS3B01G146800 chr6A 52024192 52024849 657 True 870.0 870 90.448000 4 672 1 chr6A.!!$R1 668
10 TraesCS3B01G146800 chr3A 102686142 102687258 1116 False 560.0 848 90.024500 854 1925 2 chr3A.!!$F3 1071
11 TraesCS3B01G146800 chr1A 585622626 585623262 636 False 776.0 776 88.456000 7 672 1 chr1A.!!$F1 665
12 TraesCS3B01G146800 chr1A 496324924 496326325 1401 True 540.5 593 91.217000 4 805 2 chr1A.!!$R2 801
13 TraesCS3B01G146800 chr5B 698264279 698269119 4840 False 368.0 372 91.542333 539 805 3 chr5B.!!$F2 266

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
821 6012 0.253044 CCCCGATGACATGTGGACTT 59.747 55.0 1.15 0.0 0.0 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2653 7938 0.03563 CTTGGAGGTTGGAGCTGAGG 60.036 60.0 0.0 0.0 0.0 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
124 128 6.968263 AGATGATCTCTTCTCGGAATTACA 57.032 37.500 0.00 0.00 0.00 2.41
146 150 9.524106 TTACAACTATGACAAATGACTATACCG 57.476 33.333 0.00 0.00 0.00 4.02
188 192 4.295051 GTGCTATGGAGATCTTCGAGTTC 58.705 47.826 0.00 0.00 0.00 3.01
212 216 4.720649 TGGAGACATAGACTCTTTTCCG 57.279 45.455 0.00 0.00 35.10 4.30
291 296 5.731686 GCTGAACTCAGTTTCTCAAAGTTGG 60.732 44.000 8.46 0.00 45.45 3.77
311 316 8.349568 AGTTGGAGTTATTGGGAAACTATTTC 57.650 34.615 0.00 0.00 37.31 2.17
313 318 8.581578 GTTGGAGTTATTGGGAAACTATTTCAA 58.418 33.333 3.87 0.00 41.43 2.69
351 967 5.381174 TGAAAGATTGAATGGTCTTGCTG 57.619 39.130 0.00 0.00 35.03 4.41
418 1034 4.997395 TGATGCACAGATCTGATCATCATG 59.003 41.667 34.12 22.46 41.99 3.07
438 1054 2.439507 TGTTCAGGAAGCTTTGGAGACT 59.560 45.455 0.00 0.00 0.00 3.24
547 1163 9.889128 TCTCATATTCTCATGATAACACAAACA 57.111 29.630 0.00 0.00 34.50 2.83
615 3518 3.063180 GCGAGATGATTGTCTCTTTGTGG 59.937 47.826 2.83 0.00 41.95 4.17
622 3525 3.586470 TTGTCTCTTTGTGGCCCTTAA 57.414 42.857 0.00 0.00 0.00 1.85
684 3587 7.879160 ACTATTAGGATGTAGTTCTCTAGACCG 59.121 40.741 0.00 0.00 0.00 4.79
695 5885 6.123651 AGTTCTCTAGACCGTCAATCTATGT 58.876 40.000 0.40 0.00 0.00 2.29
756 5947 8.144862 TGAATTTTTATTTGTCCATAAGGGCT 57.855 30.769 0.00 0.00 41.31 5.19
805 5996 0.696501 AATATGTATGGACCGGCCCC 59.303 55.000 3.55 5.29 34.97 5.80
806 5997 1.550130 ATATGTATGGACCGGCCCCG 61.550 60.000 3.55 0.00 39.44 5.73
807 5998 2.659946 TATGTATGGACCGGCCCCGA 62.660 60.000 3.55 0.00 42.83 5.14
808 5999 3.239253 GTATGGACCGGCCCCGAT 61.239 66.667 3.55 0.00 42.83 4.18
809 6000 3.238497 TATGGACCGGCCCCGATG 61.238 66.667 3.55 0.00 42.83 3.84
810 6001 3.759910 TATGGACCGGCCCCGATGA 62.760 63.158 3.55 0.00 42.83 2.92
813 6004 3.861797 GACCGGCCCCGATGACAT 61.862 66.667 8.54 0.00 42.83 3.06
814 6005 4.175337 ACCGGCCCCGATGACATG 62.175 66.667 8.54 0.00 42.83 3.21
815 6006 4.175337 CCGGCCCCGATGACATGT 62.175 66.667 8.54 0.00 42.83 3.21
816 6007 2.896854 CGGCCCCGATGACATGTG 60.897 66.667 1.15 0.00 42.83 3.21
817 6008 2.516930 GGCCCCGATGACATGTGG 60.517 66.667 1.15 0.00 0.00 4.17
818 6009 2.589540 GCCCCGATGACATGTGGA 59.410 61.111 1.15 0.00 0.00 4.02
819 6010 1.819632 GCCCCGATGACATGTGGAC 60.820 63.158 1.15 0.00 0.00 4.02
820 6011 1.907739 CCCCGATGACATGTGGACT 59.092 57.895 1.15 0.00 0.00 3.85
821 6012 0.253044 CCCCGATGACATGTGGACTT 59.747 55.000 1.15 0.00 0.00 3.01
822 6013 1.340017 CCCCGATGACATGTGGACTTT 60.340 52.381 1.15 0.00 0.00 2.66
823 6014 2.093181 CCCCGATGACATGTGGACTTTA 60.093 50.000 1.15 0.00 0.00 1.85
824 6015 2.936498 CCCGATGACATGTGGACTTTAC 59.064 50.000 1.15 0.00 0.00 2.01
825 6016 3.595173 CCGATGACATGTGGACTTTACA 58.405 45.455 1.15 0.00 0.00 2.41
826 6017 4.191544 CCGATGACATGTGGACTTTACAT 58.808 43.478 1.15 0.00 39.23 2.29
827 6018 4.635765 CCGATGACATGTGGACTTTACATT 59.364 41.667 1.15 0.00 36.67 2.71
828 6019 5.815222 CCGATGACATGTGGACTTTACATTA 59.185 40.000 1.15 0.00 36.67 1.90
829 6020 6.315144 CCGATGACATGTGGACTTTACATTAA 59.685 38.462 1.15 0.00 36.67 1.40
830 6021 7.012327 CCGATGACATGTGGACTTTACATTAAT 59.988 37.037 1.15 0.00 36.67 1.40
831 6022 7.852454 CGATGACATGTGGACTTTACATTAATG 59.148 37.037 14.01 14.01 36.67 1.90
832 6023 7.994425 TGACATGTGGACTTTACATTAATGT 57.006 32.000 23.80 23.80 44.48 2.71
833 6024 8.402798 TGACATGTGGACTTTACATTAATGTT 57.597 30.769 25.31 8.29 41.97 2.71
834 6025 8.855110 TGACATGTGGACTTTACATTAATGTTT 58.145 29.630 25.31 8.62 41.97 2.83
835 6026 9.128107 GACATGTGGACTTTACATTAATGTTTG 57.872 33.333 25.31 16.99 41.97 2.93
836 6027 8.087750 ACATGTGGACTTTACATTAATGTTTGG 58.912 33.333 25.31 16.62 41.97 3.28
837 6028 7.589958 TGTGGACTTTACATTAATGTTTGGT 57.410 32.000 25.31 19.24 41.97 3.67
838 6029 8.012957 TGTGGACTTTACATTAATGTTTGGTT 57.987 30.769 25.31 7.62 41.97 3.67
839 6030 9.132923 TGTGGACTTTACATTAATGTTTGGTTA 57.867 29.630 25.31 4.42 41.97 2.85
858 6049 7.681939 TGGTTATTTACAGAGACATTCAACC 57.318 36.000 0.00 0.00 33.83 3.77
1010 6202 1.292541 GTTCCTTCCGTTCCTCGCT 59.707 57.895 0.00 0.00 38.35 4.93
1374 6614 2.582436 GCACCAAGCCGTAGCCTA 59.418 61.111 0.00 0.00 41.25 3.93
1591 6839 3.740115 ACATCAGTCCTGTAACAACACC 58.260 45.455 0.00 0.00 0.00 4.16
1610 6858 2.765699 ACCTGCAACCAAGAATGTTGTT 59.234 40.909 5.19 0.00 43.86 2.83
1611 6859 3.125316 CCTGCAACCAAGAATGTTGTTG 58.875 45.455 5.19 0.00 43.86 3.33
1612 6860 3.430651 CCTGCAACCAAGAATGTTGTTGT 60.431 43.478 5.19 0.00 43.86 3.32
1613 6861 3.519579 TGCAACCAAGAATGTTGTTGTG 58.480 40.909 5.19 0.00 43.86 3.33
1614 6862 3.194329 TGCAACCAAGAATGTTGTTGTGA 59.806 39.130 5.19 0.00 43.86 3.58
1617 6865 4.900635 ACCAAGAATGTTGTTGTGAGAC 57.099 40.909 2.56 0.00 30.21 3.36
1647 6895 9.745018 AATAATAATAATACTGCTGCAGGATGT 57.255 29.630 27.11 18.38 34.89 3.06
1650 6898 2.515926 ATACTGCTGCAGGATGTACG 57.484 50.000 31.00 7.14 33.16 3.67
1712 6960 5.052481 TCTGTTCAATGAAGCATAGATCCG 58.948 41.667 0.00 0.00 0.00 4.18
1724 6972 3.867600 GCATAGATCCGGATGCTCACAAT 60.868 47.826 24.82 6.40 44.15 2.71
1756 7004 4.572389 GCTACCATCATCAACGATTTCTGT 59.428 41.667 0.00 0.00 0.00 3.41
1767 7015 4.111375 ACGATTTCTGTACTGGCACTAG 57.889 45.455 0.00 0.00 0.00 2.57
1770 7018 4.380550 CGATTTCTGTACTGGCACTAGTCA 60.381 45.833 0.00 0.00 32.19 3.41
1771 7019 4.948341 TTTCTGTACTGGCACTAGTCAA 57.052 40.909 0.00 0.00 32.19 3.18
1773 7021 4.456280 TCTGTACTGGCACTAGTCAATG 57.544 45.455 0.00 0.00 32.19 2.82
1785 7070 3.819337 ACTAGTCAATGATGATGCATGGC 59.181 43.478 2.46 0.00 38.01 4.40
1866 7151 2.416893 GGCGGAAAATGAGTCAAGTCTC 59.583 50.000 0.00 0.00 35.28 3.36
1927 7212 0.728129 CCGCGATGATTCATGCATGC 60.728 55.000 22.25 11.82 0.00 4.06
1931 7216 1.529865 CGATGATTCATGCATGCGACT 59.470 47.619 22.25 5.86 0.00 4.18
1945 7230 2.024871 GACTCCATCGGCGACTCG 59.975 66.667 13.76 3.42 0.00 4.18
1946 7231 3.471244 GACTCCATCGGCGACTCGG 62.471 68.421 13.76 13.87 0.00 4.63
1976 7261 1.927527 AGGCCAGGGAGCACAAGAT 60.928 57.895 5.01 0.00 0.00 2.40
1993 7278 4.475016 ACAAGATAAGCCAGTAATCCCAGT 59.525 41.667 0.00 0.00 0.00 4.00
1994 7279 4.965200 AGATAAGCCAGTAATCCCAGTC 57.035 45.455 0.00 0.00 0.00 3.51
2001 7286 2.419297 CCAGTAATCCCAGTCTCAGTGC 60.419 54.545 0.00 0.00 0.00 4.40
2009 7294 2.612972 CCCAGTCTCAGTGCGTGTTTAT 60.613 50.000 0.00 0.00 0.00 1.40
2010 7295 2.668457 CCAGTCTCAGTGCGTGTTTATC 59.332 50.000 0.00 0.00 0.00 1.75
2011 7296 2.342651 CAGTCTCAGTGCGTGTTTATCG 59.657 50.000 0.00 0.00 0.00 2.92
2074 7359 2.925578 TCGCCATTTGATTCAAGCTG 57.074 45.000 0.00 2.29 0.00 4.24
2075 7360 2.161855 TCGCCATTTGATTCAAGCTGT 58.838 42.857 0.00 0.00 0.00 4.40
2098 7383 1.737793 GCTGTCAGTTGAATAACCCCG 59.262 52.381 0.93 0.00 37.52 5.73
2116 7401 2.180769 CGGAGACATTCGCACCGA 59.819 61.111 0.00 0.00 45.31 4.69
2117 7402 1.226974 CGGAGACATTCGCACCGAT 60.227 57.895 0.00 0.00 45.31 4.18
2118 7403 1.209275 CGGAGACATTCGCACCGATC 61.209 60.000 0.00 0.00 45.31 3.69
2119 7404 1.209275 GGAGACATTCGCACCGATCG 61.209 60.000 8.51 8.51 35.23 3.69
2120 7405 0.248498 GAGACATTCGCACCGATCGA 60.248 55.000 18.66 0.00 35.23 3.59
2146 7431 2.433318 GACGTCTGCCTGCCTGAC 60.433 66.667 8.70 3.33 38.58 3.51
2155 7440 1.002430 TGCCTGCCTGACTTGTTCTAG 59.998 52.381 0.00 0.00 0.00 2.43
2157 7442 2.693069 CCTGCCTGACTTGTTCTAGTG 58.307 52.381 0.00 0.00 0.00 2.74
2172 7457 5.527214 TGTTCTAGTGTCATCCTTGTTTGTG 59.473 40.000 0.00 0.00 0.00 3.33
2181 7466 5.476945 GTCATCCTTGTTTGTGGTTTAGGAT 59.523 40.000 0.00 0.00 41.85 3.24
2185 7470 7.519032 TCCTTGTTTGTGGTTTAGGATAAAG 57.481 36.000 0.00 0.00 0.00 1.85
2205 7490 1.960689 GGATACTGTCAGGGAGAGAGC 59.039 57.143 4.53 0.00 41.17 4.09
2206 7491 1.960689 GATACTGTCAGGGAGAGAGCC 59.039 57.143 4.53 0.00 41.17 4.70
2207 7492 0.704664 TACTGTCAGGGAGAGAGCCA 59.295 55.000 4.53 0.00 41.17 4.75
2208 7493 0.902516 ACTGTCAGGGAGAGAGCCAC 60.903 60.000 4.53 0.00 41.17 5.01
2209 7494 1.943116 CTGTCAGGGAGAGAGCCACG 61.943 65.000 0.00 0.00 30.14 4.94
2210 7495 1.979693 GTCAGGGAGAGAGCCACGT 60.980 63.158 0.00 0.00 0.00 4.49
2211 7496 1.979155 TCAGGGAGAGAGCCACGTG 60.979 63.158 9.08 9.08 0.00 4.49
2212 7497 2.681778 AGGGAGAGAGCCACGTGG 60.682 66.667 30.66 30.66 38.53 4.94
2213 7498 2.997897 GGGAGAGAGCCACGTGGT 60.998 66.667 33.92 21.33 37.57 4.16
2214 7499 2.574399 GGAGAGAGCCACGTGGTC 59.426 66.667 33.92 27.21 41.93 4.02
2215 7500 2.179517 GAGAGAGCCACGTGGTCG 59.820 66.667 33.92 11.21 46.24 4.79
2216 7501 3.343788 GAGAGAGCCACGTGGTCGG 62.344 68.421 33.92 11.07 46.24 4.79
2217 7502 3.371063 GAGAGCCACGTGGTCGGA 61.371 66.667 33.92 0.00 46.24 4.55
2218 7503 3.343788 GAGAGCCACGTGGTCGGAG 62.344 68.421 33.92 9.66 46.24 4.63
2221 7506 4.980805 GCCACGTGGTCGGAGCAA 62.981 66.667 33.92 0.00 41.85 3.91
2222 7507 2.047274 CCACGTGGTCGGAGCAAT 60.047 61.111 26.95 0.22 41.85 3.56
2223 7508 1.216977 CCACGTGGTCGGAGCAATA 59.783 57.895 26.95 0.00 41.85 1.90
2224 7509 0.179084 CCACGTGGTCGGAGCAATAT 60.179 55.000 26.95 0.00 41.85 1.28
2225 7510 1.067974 CCACGTGGTCGGAGCAATATA 59.932 52.381 26.95 0.00 41.85 0.86
2226 7511 2.124903 CACGTGGTCGGAGCAATATAC 58.875 52.381 12.00 0.00 41.85 1.47
2227 7512 2.029623 ACGTGGTCGGAGCAATATACT 58.970 47.619 12.00 0.00 41.85 2.12
2228 7513 2.034305 ACGTGGTCGGAGCAATATACTC 59.966 50.000 12.00 0.00 41.85 2.59
2229 7514 2.293677 CGTGGTCGGAGCAATATACTCT 59.706 50.000 12.00 0.00 34.46 3.24
2230 7515 3.643763 GTGGTCGGAGCAATATACTCTG 58.356 50.000 12.00 7.80 41.14 3.35
2231 7516 2.628178 TGGTCGGAGCAATATACTCTGG 59.372 50.000 7.54 3.96 40.35 3.86
2232 7517 2.610727 GGTCGGAGCAATATACTCTGGC 60.611 54.545 12.36 11.01 43.11 4.85
2233 7518 1.618837 TCGGAGCAATATACTCTGGCC 59.381 52.381 12.36 0.00 40.35 5.36
2234 7519 1.344438 CGGAGCAATATACTCTGGCCA 59.656 52.381 4.71 4.71 36.97 5.36
2235 7520 2.611473 CGGAGCAATATACTCTGGCCAG 60.611 54.545 27.87 27.87 36.97 4.85
2236 7521 2.370189 GGAGCAATATACTCTGGCCAGT 59.630 50.000 31.58 17.58 34.46 4.00
2237 7522 3.578716 GGAGCAATATACTCTGGCCAGTA 59.421 47.826 31.58 19.27 34.46 2.74
2238 7523 4.561105 GAGCAATATACTCTGGCCAGTAC 58.439 47.826 31.58 6.01 31.53 2.73
2239 7524 4.227197 AGCAATATACTCTGGCCAGTACT 58.773 43.478 31.58 17.15 31.53 2.73
2240 7525 5.394738 AGCAATATACTCTGGCCAGTACTA 58.605 41.667 31.58 18.65 31.53 1.82
2241 7526 6.019748 AGCAATATACTCTGGCCAGTACTAT 58.980 40.000 31.58 23.22 31.53 2.12
2242 7527 6.071108 AGCAATATACTCTGGCCAGTACTATG 60.071 42.308 31.58 21.48 31.53 2.23
2243 7528 6.295349 GCAATATACTCTGGCCAGTACTATGT 60.295 42.308 31.58 21.12 31.53 2.29
2244 7529 7.316640 CAATATACTCTGGCCAGTACTATGTC 58.683 42.308 31.58 0.00 31.53 3.06
2245 7530 3.101643 ACTCTGGCCAGTACTATGTCA 57.898 47.619 31.58 8.74 0.00 3.58
2246 7531 3.027412 ACTCTGGCCAGTACTATGTCAG 58.973 50.000 31.58 19.91 0.00 3.51
2247 7532 3.027412 CTCTGGCCAGTACTATGTCAGT 58.973 50.000 31.58 0.00 41.62 3.41
2248 7533 2.760650 TCTGGCCAGTACTATGTCAGTG 59.239 50.000 31.58 2.29 38.24 3.66
2249 7534 1.207089 TGGCCAGTACTATGTCAGTGC 59.793 52.381 0.00 0.00 39.97 4.40
2250 7535 1.473434 GGCCAGTACTATGTCAGTGCC 60.473 57.143 0.00 0.00 40.51 5.01
2251 7536 1.482593 GCCAGTACTATGTCAGTGCCT 59.517 52.381 0.00 0.00 40.51 4.75
2252 7537 2.482142 GCCAGTACTATGTCAGTGCCTC 60.482 54.545 0.00 0.00 40.51 4.70
2253 7538 2.760650 CCAGTACTATGTCAGTGCCTCA 59.239 50.000 0.00 0.00 40.51 3.86
2254 7539 3.181482 CCAGTACTATGTCAGTGCCTCAG 60.181 52.174 0.00 0.00 40.51 3.35
2255 7540 3.696548 CAGTACTATGTCAGTGCCTCAGA 59.303 47.826 0.00 0.00 40.51 3.27
2256 7541 4.158579 CAGTACTATGTCAGTGCCTCAGAA 59.841 45.833 0.00 0.00 40.51 3.02
2257 7542 4.772624 AGTACTATGTCAGTGCCTCAGAAA 59.227 41.667 0.00 0.00 40.51 2.52
2258 7543 4.199432 ACTATGTCAGTGCCTCAGAAAG 57.801 45.455 0.00 0.00 35.62 2.62
2259 7544 1.818642 ATGTCAGTGCCTCAGAAAGC 58.181 50.000 0.00 0.00 0.00 3.51
2260 7545 0.469494 TGTCAGTGCCTCAGAAAGCA 59.531 50.000 0.00 0.00 36.44 3.91
2261 7546 1.134128 TGTCAGTGCCTCAGAAAGCAA 60.134 47.619 0.00 0.00 41.48 3.91
2262 7547 1.534595 GTCAGTGCCTCAGAAAGCAAG 59.465 52.381 0.00 0.00 41.48 4.01
2263 7548 0.240411 CAGTGCCTCAGAAAGCAAGC 59.760 55.000 0.00 0.00 41.48 4.01
2264 7549 0.179009 AGTGCCTCAGAAAGCAAGCA 60.179 50.000 0.00 0.00 41.48 3.91
2265 7550 0.240411 GTGCCTCAGAAAGCAAGCAG 59.760 55.000 0.00 0.00 41.48 4.24
2266 7551 1.212229 GCCTCAGAAAGCAAGCAGC 59.788 57.895 0.00 0.00 46.19 5.25
2286 7571 5.543507 AGCTTGACTGAAAGAGAGAGAAA 57.456 39.130 0.00 0.00 37.43 2.52
2287 7572 5.923204 AGCTTGACTGAAAGAGAGAGAAAA 58.077 37.500 0.00 0.00 37.43 2.29
2288 7573 6.352516 AGCTTGACTGAAAGAGAGAGAAAAA 58.647 36.000 0.00 0.00 37.43 1.94
2311 7596 8.512800 AAAACTTTAACTAGAGTACGTAGTGC 57.487 34.615 7.86 0.00 45.73 4.40
2325 7610 7.982371 GTACGTAGTGCTATCATGTTAAGTT 57.018 36.000 0.00 0.00 45.73 2.66
2326 7611 8.047933 GTACGTAGTGCTATCATGTTAAGTTC 57.952 38.462 0.00 0.00 45.73 3.01
2327 7612 6.627243 ACGTAGTGCTATCATGTTAAGTTCA 58.373 36.000 0.00 0.00 42.51 3.18
2328 7613 6.530534 ACGTAGTGCTATCATGTTAAGTTCAC 59.469 38.462 0.00 0.00 42.51 3.18
2329 7614 6.752351 CGTAGTGCTATCATGTTAAGTTCACT 59.248 38.462 0.00 0.00 36.41 3.41
2330 7615 7.275779 CGTAGTGCTATCATGTTAAGTTCACTT 59.724 37.037 0.00 0.00 39.85 3.16
2331 7616 7.369803 AGTGCTATCATGTTAAGTTCACTTG 57.630 36.000 2.26 0.00 37.40 3.16
2332 7617 6.372659 AGTGCTATCATGTTAAGTTCACTTGG 59.627 38.462 2.26 0.00 37.40 3.61
2333 7618 5.123820 TGCTATCATGTTAAGTTCACTTGGC 59.876 40.000 2.26 1.48 37.40 4.52
2334 7619 5.449177 GCTATCATGTTAAGTTCACTTGGCC 60.449 44.000 0.00 0.00 37.40 5.36
2335 7620 3.826524 TCATGTTAAGTTCACTTGGCCA 58.173 40.909 0.00 0.00 37.40 5.36
2336 7621 4.211125 TCATGTTAAGTTCACTTGGCCAA 58.789 39.130 19.25 19.25 37.40 4.52
2337 7622 4.278170 TCATGTTAAGTTCACTTGGCCAAG 59.722 41.667 38.30 38.30 43.79 3.61
2338 7623 2.360801 TGTTAAGTTCACTTGGCCAAGC 59.639 45.455 39.52 25.40 41.99 4.01
2339 7624 2.356665 TAAGTTCACTTGGCCAAGCA 57.643 45.000 39.52 26.31 41.99 3.91
2340 7625 1.708341 AAGTTCACTTGGCCAAGCAT 58.292 45.000 39.52 22.65 41.99 3.79
2341 7626 2.584835 AGTTCACTTGGCCAAGCATA 57.415 45.000 39.52 24.64 41.99 3.14
2342 7627 3.091633 AGTTCACTTGGCCAAGCATAT 57.908 42.857 39.52 21.55 41.99 1.78
2343 7628 2.756760 AGTTCACTTGGCCAAGCATATG 59.243 45.455 39.52 30.13 41.99 1.78
2344 7629 1.105457 TCACTTGGCCAAGCATATGC 58.895 50.000 39.52 20.36 41.99 3.14
2345 7630 0.818938 CACTTGGCCAAGCATATGCA 59.181 50.000 39.52 6.60 45.16 3.96
2346 7631 0.819582 ACTTGGCCAAGCATATGCAC 59.180 50.000 39.52 14.67 45.16 4.57
2347 7632 0.248743 CTTGGCCAAGCATATGCACG 60.249 55.000 31.70 18.22 45.16 5.34
2348 7633 0.679321 TTGGCCAAGCATATGCACGA 60.679 50.000 28.62 10.07 45.16 4.35
2349 7634 1.096967 TGGCCAAGCATATGCACGAG 61.097 55.000 28.62 15.11 45.16 4.18
2350 7635 1.097547 GGCCAAGCATATGCACGAGT 61.098 55.000 28.62 5.48 45.16 4.18
2351 7636 0.305922 GCCAAGCATATGCACGAGTC 59.694 55.000 28.62 9.29 45.16 3.36
2352 7637 1.655484 CCAAGCATATGCACGAGTCA 58.345 50.000 28.62 0.00 45.16 3.41
2353 7638 1.596260 CCAAGCATATGCACGAGTCAG 59.404 52.381 28.62 9.08 45.16 3.51
2354 7639 1.004185 CAAGCATATGCACGAGTCAGC 60.004 52.381 28.62 0.00 45.16 4.26
2355 7640 0.531532 AGCATATGCACGAGTCAGCC 60.532 55.000 28.62 0.00 45.16 4.85
2356 7641 0.811219 GCATATGCACGAGTCAGCCA 60.811 55.000 22.84 0.00 41.59 4.75
2357 7642 1.655484 CATATGCACGAGTCAGCCAA 58.345 50.000 0.00 0.00 0.00 4.52
2358 7643 2.009051 CATATGCACGAGTCAGCCAAA 58.991 47.619 0.00 0.00 0.00 3.28
2359 7644 1.725641 TATGCACGAGTCAGCCAAAG 58.274 50.000 0.00 0.00 0.00 2.77
2360 7645 0.957395 ATGCACGAGTCAGCCAAAGG 60.957 55.000 0.00 0.00 0.00 3.11
2361 7646 1.598130 GCACGAGTCAGCCAAAGGT 60.598 57.895 0.00 0.00 0.00 3.50
2362 7647 1.845809 GCACGAGTCAGCCAAAGGTG 61.846 60.000 0.00 0.00 43.07 4.00
2383 7668 5.036737 GTGAATTTTCACGGCATAAGATGG 58.963 41.667 7.62 0.00 46.80 3.51
2384 7669 4.439974 TGAATTTTCACGGCATAAGATGGC 60.440 41.667 3.05 3.05 41.19 4.40
2389 7674 3.248029 GGCATAAGATGGCGCGAG 58.752 61.111 12.10 0.00 46.11 5.03
2390 7675 1.595382 GGCATAAGATGGCGCGAGT 60.595 57.895 12.10 0.00 46.11 4.18
2391 7676 1.160329 GGCATAAGATGGCGCGAGTT 61.160 55.000 12.10 0.00 46.11 3.01
2392 7677 1.497991 GCATAAGATGGCGCGAGTTA 58.502 50.000 12.10 0.00 0.00 2.24
2393 7678 1.192534 GCATAAGATGGCGCGAGTTAC 59.807 52.381 12.10 0.00 0.00 2.50
2394 7679 2.743938 CATAAGATGGCGCGAGTTACT 58.256 47.619 12.10 0.00 0.00 2.24
2395 7680 2.953466 TAAGATGGCGCGAGTTACTT 57.047 45.000 12.10 10.54 0.00 2.24
2396 7681 2.094762 AAGATGGCGCGAGTTACTTT 57.905 45.000 12.10 0.00 0.00 2.66
2397 7682 1.359848 AGATGGCGCGAGTTACTTTG 58.640 50.000 12.10 0.00 0.00 2.77
2398 7683 1.076332 GATGGCGCGAGTTACTTTGT 58.924 50.000 12.10 0.00 0.00 2.83
2399 7684 0.796312 ATGGCGCGAGTTACTTTGTG 59.204 50.000 12.10 0.00 0.00 3.33
2400 7685 1.225376 TGGCGCGAGTTACTTTGTGG 61.225 55.000 12.10 0.00 0.00 4.17
2401 7686 0.947180 GGCGCGAGTTACTTTGTGGA 60.947 55.000 12.10 0.00 0.00 4.02
2402 7687 0.438830 GCGCGAGTTACTTTGTGGAG 59.561 55.000 12.10 0.00 0.00 3.86
2403 7688 1.779569 CGCGAGTTACTTTGTGGAGT 58.220 50.000 0.00 0.00 0.00 3.85
2404 7689 1.719780 CGCGAGTTACTTTGTGGAGTC 59.280 52.381 0.00 0.00 0.00 3.36
2405 7690 2.067013 GCGAGTTACTTTGTGGAGTCC 58.933 52.381 0.73 0.73 0.00 3.85
2406 7691 2.547218 GCGAGTTACTTTGTGGAGTCCA 60.547 50.000 8.12 8.12 0.00 4.02
2419 7704 4.485653 TGGAGTCCACCATATGATAGGA 57.514 45.455 8.12 5.51 34.77 2.94
2420 7705 5.028678 TGGAGTCCACCATATGATAGGAT 57.971 43.478 8.12 0.00 34.77 3.24
2421 7706 4.779489 TGGAGTCCACCATATGATAGGATG 59.221 45.833 8.12 0.00 34.77 3.51
2422 7707 5.026121 GGAGTCCACCATATGATAGGATGA 58.974 45.833 3.60 0.00 0.00 2.92
2423 7708 5.664908 GGAGTCCACCATATGATAGGATGAT 59.335 44.000 3.60 0.00 0.00 2.45
2424 7709 6.183360 GGAGTCCACCATATGATAGGATGATC 60.183 46.154 3.60 7.88 0.00 2.92
2425 7710 5.664908 AGTCCACCATATGATAGGATGATCC 59.335 44.000 2.46 2.46 36.58 3.36
2426 7711 5.426509 GTCCACCATATGATAGGATGATCCA 59.573 44.000 14.90 0.00 39.61 3.41
2427 7712 5.426509 TCCACCATATGATAGGATGATCCAC 59.573 44.000 14.90 5.40 39.61 4.02
2428 7713 5.354767 CACCATATGATAGGATGATCCACG 58.645 45.833 14.90 0.00 39.61 4.94
2429 7714 5.127682 CACCATATGATAGGATGATCCACGA 59.872 44.000 14.90 0.00 39.61 4.35
2430 7715 5.362143 ACCATATGATAGGATGATCCACGAG 59.638 44.000 14.90 0.00 39.61 4.18
2431 7716 5.221402 CCATATGATAGGATGATCCACGAGG 60.221 48.000 14.90 0.00 39.61 4.63
2440 7725 3.177291 TCCACGAGGACTGGAGGA 58.823 61.111 0.00 0.00 39.61 3.71
2441 7726 1.304217 TCCACGAGGACTGGAGGAC 60.304 63.158 0.00 0.00 39.61 3.85
2442 7727 2.352032 CCACGAGGACTGGAGGACC 61.352 68.421 0.00 0.00 36.89 4.46
2443 7728 1.304547 CACGAGGACTGGAGGACCT 60.305 63.158 0.00 0.00 37.04 3.85
2444 7729 0.900647 CACGAGGACTGGAGGACCTT 60.901 60.000 0.00 0.00 37.04 3.50
2445 7730 0.702902 ACGAGGACTGGAGGACCTTA 59.297 55.000 0.00 0.00 37.04 2.69
2446 7731 1.288335 ACGAGGACTGGAGGACCTTAT 59.712 52.381 0.00 0.00 37.04 1.73
2447 7732 2.292323 ACGAGGACTGGAGGACCTTATT 60.292 50.000 0.00 0.00 37.04 1.40
2448 7733 2.766828 CGAGGACTGGAGGACCTTATTT 59.233 50.000 0.00 0.00 37.04 1.40
2449 7734 3.197983 CGAGGACTGGAGGACCTTATTTT 59.802 47.826 0.00 0.00 37.04 1.82
2450 7735 4.680975 CGAGGACTGGAGGACCTTATTTTC 60.681 50.000 0.00 0.00 37.04 2.29
2451 7736 3.523972 AGGACTGGAGGACCTTATTTTCC 59.476 47.826 0.00 0.00 37.04 3.13
2452 7737 3.532542 GACTGGAGGACCTTATTTTCCG 58.467 50.000 0.00 0.00 36.95 4.30
2453 7738 3.178865 ACTGGAGGACCTTATTTTCCGA 58.821 45.455 0.00 0.00 36.95 4.55
2454 7739 3.197983 ACTGGAGGACCTTATTTTCCGAG 59.802 47.826 0.00 0.00 36.95 4.63
2455 7740 3.178865 TGGAGGACCTTATTTTCCGAGT 58.821 45.455 0.00 0.00 36.95 4.18
2456 7741 4.355549 TGGAGGACCTTATTTTCCGAGTA 58.644 43.478 0.00 0.00 36.95 2.59
2457 7742 4.778958 TGGAGGACCTTATTTTCCGAGTAA 59.221 41.667 0.00 0.00 36.95 2.24
2458 7743 5.114780 GGAGGACCTTATTTTCCGAGTAAC 58.885 45.833 0.00 0.00 36.95 2.50
2459 7744 5.105023 GGAGGACCTTATTTTCCGAGTAACT 60.105 44.000 0.00 0.00 36.95 2.24
2460 7745 6.370186 AGGACCTTATTTTCCGAGTAACTT 57.630 37.500 0.00 0.00 36.95 2.66
2461 7746 6.404708 AGGACCTTATTTTCCGAGTAACTTC 58.595 40.000 0.00 0.00 36.95 3.01
2462 7747 5.583854 GGACCTTATTTTCCGAGTAACTTCC 59.416 44.000 0.00 0.00 0.00 3.46
2463 7748 5.173664 ACCTTATTTTCCGAGTAACTTCCG 58.826 41.667 0.00 0.00 0.00 4.30
2464 7749 4.569564 CCTTATTTTCCGAGTAACTTCCGG 59.430 45.833 0.00 0.00 44.22 5.14
2465 7750 1.799544 TTTTCCGAGTAACTTCCGGC 58.200 50.000 0.00 0.00 42.70 6.13
2466 7751 0.037046 TTTCCGAGTAACTTCCGGCC 60.037 55.000 0.00 0.00 42.70 6.13
2467 7752 1.186917 TTCCGAGTAACTTCCGGCCA 61.187 55.000 2.24 0.00 42.70 5.36
2468 7753 1.186917 TCCGAGTAACTTCCGGCCAA 61.187 55.000 2.24 0.00 42.70 4.52
2469 7754 0.739813 CCGAGTAACTTCCGGCCAAG 60.740 60.000 2.24 1.69 36.62 3.61
2470 7755 0.037605 CGAGTAACTTCCGGCCAAGT 60.038 55.000 2.24 2.48 38.30 3.16
2471 7756 1.607251 CGAGTAACTTCCGGCCAAGTT 60.607 52.381 21.17 21.17 46.27 2.66
2472 7757 2.501261 GAGTAACTTCCGGCCAAGTTT 58.499 47.619 22.24 9.02 42.81 2.66
2473 7758 2.882761 GAGTAACTTCCGGCCAAGTTTT 59.117 45.455 22.24 13.35 42.81 2.43
2474 7759 2.882761 AGTAACTTCCGGCCAAGTTTTC 59.117 45.455 22.24 16.31 42.81 2.29
2475 7760 1.037493 AACTTCCGGCCAAGTTTTCC 58.963 50.000 13.97 0.00 42.81 3.13
2476 7761 0.185175 ACTTCCGGCCAAGTTTTCCT 59.815 50.000 2.24 0.00 32.34 3.36
2477 7762 0.881796 CTTCCGGCCAAGTTTTCCTC 59.118 55.000 2.24 0.00 0.00 3.71
2478 7763 0.476771 TTCCGGCCAAGTTTTCCTCT 59.523 50.000 2.24 0.00 0.00 3.69
2479 7764 1.354101 TCCGGCCAAGTTTTCCTCTA 58.646 50.000 2.24 0.00 0.00 2.43
2480 7765 1.278127 TCCGGCCAAGTTTTCCTCTAG 59.722 52.381 2.24 0.00 0.00 2.43
2481 7766 1.278127 CCGGCCAAGTTTTCCTCTAGA 59.722 52.381 2.24 0.00 0.00 2.43
2482 7767 2.290071 CCGGCCAAGTTTTCCTCTAGAA 60.290 50.000 2.24 0.00 0.00 2.10
2483 7768 3.408634 CGGCCAAGTTTTCCTCTAGAAA 58.591 45.455 2.24 0.00 42.82 2.52
2494 7779 4.803098 TCCTCTAGAAAACTTCCTTCCG 57.197 45.455 0.00 0.00 0.00 4.30
2495 7780 3.514309 TCCTCTAGAAAACTTCCTTCCGG 59.486 47.826 0.00 0.00 0.00 5.14
2496 7781 3.261137 CCTCTAGAAAACTTCCTTCCGGT 59.739 47.826 0.00 0.00 0.00 5.28
2497 7782 4.262938 CCTCTAGAAAACTTCCTTCCGGTT 60.263 45.833 0.00 0.00 0.00 4.44
2498 7783 5.046807 CCTCTAGAAAACTTCCTTCCGGTTA 60.047 44.000 0.00 0.00 0.00 2.85
2499 7784 6.423776 TCTAGAAAACTTCCTTCCGGTTAA 57.576 37.500 0.00 0.00 0.00 2.01
2500 7785 7.012661 TCTAGAAAACTTCCTTCCGGTTAAT 57.987 36.000 0.00 0.00 0.00 1.40
2501 7786 7.455891 TCTAGAAAACTTCCTTCCGGTTAATT 58.544 34.615 0.00 0.00 0.00 1.40
2502 7787 8.596293 TCTAGAAAACTTCCTTCCGGTTAATTA 58.404 33.333 0.00 0.00 0.00 1.40
2503 7788 7.444629 AGAAAACTTCCTTCCGGTTAATTAC 57.555 36.000 0.00 0.00 0.00 1.89
2504 7789 6.432162 AGAAAACTTCCTTCCGGTTAATTACC 59.568 38.462 0.00 0.00 44.03 2.85
2505 7790 4.226427 ACTTCCTTCCGGTTAATTACCC 57.774 45.455 0.00 0.00 44.70 3.69
2506 7791 2.985957 TCCTTCCGGTTAATTACCCG 57.014 50.000 14.08 14.08 44.70 5.28
2518 7803 7.980742 GGTTAATTACCCGAGCAAATAAAAG 57.019 36.000 0.00 0.00 41.43 2.27
2519 7804 7.764331 GGTTAATTACCCGAGCAAATAAAAGA 58.236 34.615 0.00 0.00 41.43 2.52
2520 7805 7.913821 GGTTAATTACCCGAGCAAATAAAAGAG 59.086 37.037 0.00 0.00 41.43 2.85
2521 7806 8.456471 GTTAATTACCCGAGCAAATAAAAGAGT 58.544 33.333 0.00 0.00 0.00 3.24
2522 7807 6.679327 ATTACCCGAGCAAATAAAAGAGTC 57.321 37.500 0.00 0.00 0.00 3.36
2523 7808 3.000727 ACCCGAGCAAATAAAAGAGTCG 58.999 45.455 0.00 0.00 0.00 4.18
2524 7809 2.351726 CCCGAGCAAATAAAAGAGTCGG 59.648 50.000 0.00 0.00 44.04 4.79
2525 7810 3.259064 CCGAGCAAATAAAAGAGTCGGA 58.741 45.455 1.64 0.00 46.69 4.55
2526 7811 3.307242 CCGAGCAAATAAAAGAGTCGGAG 59.693 47.826 1.64 0.00 46.69 4.63
2527 7812 4.174009 CGAGCAAATAAAAGAGTCGGAGA 58.826 43.478 0.00 0.00 0.00 3.71
2540 7825 4.110493 GGAGACGGCGAAGAATGG 57.890 61.111 16.62 0.00 0.00 3.16
2541 7826 2.174319 GGAGACGGCGAAGAATGGC 61.174 63.158 16.62 0.00 0.00 4.40
2542 7827 2.125106 AGACGGCGAAGAATGGCC 60.125 61.111 16.62 0.00 46.17 5.36
2547 7832 2.796651 GCGAAGAATGGCCAGCTG 59.203 61.111 13.05 6.78 0.00 4.24
2548 7833 2.796651 CGAAGAATGGCCAGCTGC 59.203 61.111 13.05 9.06 40.16 5.25
2549 7834 2.042259 CGAAGAATGGCCAGCTGCA 61.042 57.895 13.05 1.67 43.89 4.41
2550 7835 1.381928 CGAAGAATGGCCAGCTGCAT 61.382 55.000 13.05 4.43 43.89 3.96
2551 7836 0.102481 GAAGAATGGCCAGCTGCATG 59.898 55.000 13.05 0.00 43.89 4.06
2552 7837 1.956629 AAGAATGGCCAGCTGCATGC 61.957 55.000 13.05 11.82 43.89 4.06
2563 7848 3.197092 TGCATGCGCATGACTCGG 61.197 61.111 45.47 24.21 45.36 4.63
2564 7849 4.602696 GCATGCGCATGACTCGGC 62.603 66.667 45.47 29.24 41.20 5.54
2582 7867 3.670377 GCTCCGCCGGTTTTGCTT 61.670 61.111 1.63 0.00 0.00 3.91
2583 7868 3.039134 CTCCGCCGGTTTTGCTTT 58.961 55.556 1.63 0.00 0.00 3.51
2584 7869 1.858372 GCTCCGCCGGTTTTGCTTTA 61.858 55.000 1.63 0.00 0.00 1.85
2585 7870 0.808755 CTCCGCCGGTTTTGCTTTAT 59.191 50.000 1.63 0.00 0.00 1.40
2586 7871 0.806241 TCCGCCGGTTTTGCTTTATC 59.194 50.000 1.63 0.00 0.00 1.75
2587 7872 0.179148 CCGCCGGTTTTGCTTTATCC 60.179 55.000 1.90 0.00 0.00 2.59
2588 7873 0.523966 CGCCGGTTTTGCTTTATCCA 59.476 50.000 1.90 0.00 0.00 3.41
2589 7874 1.731098 CGCCGGTTTTGCTTTATCCAC 60.731 52.381 1.90 0.00 0.00 4.02
2590 7875 1.271102 GCCGGTTTTGCTTTATCCACA 59.729 47.619 1.90 0.00 0.00 4.17
2591 7876 2.288518 GCCGGTTTTGCTTTATCCACAA 60.289 45.455 1.90 0.00 0.00 3.33
2592 7877 3.313690 CCGGTTTTGCTTTATCCACAAC 58.686 45.455 0.00 0.00 0.00 3.32
2593 7878 2.977169 CGGTTTTGCTTTATCCACAACG 59.023 45.455 0.00 0.00 0.00 4.10
2594 7879 3.549221 CGGTTTTGCTTTATCCACAACGT 60.549 43.478 0.00 0.00 0.00 3.99
2595 7880 3.978855 GGTTTTGCTTTATCCACAACGTC 59.021 43.478 0.00 0.00 0.00 4.34
2596 7881 4.498345 GGTTTTGCTTTATCCACAACGTCA 60.498 41.667 0.00 0.00 0.00 4.35
2597 7882 4.481930 TTTGCTTTATCCACAACGTCAG 57.518 40.909 0.00 0.00 0.00 3.51
2598 7883 1.804151 TGCTTTATCCACAACGTCAGC 59.196 47.619 0.00 0.00 0.00 4.26
2599 7884 1.201921 GCTTTATCCACAACGTCAGCG 60.202 52.381 0.00 0.00 44.93 5.18
2600 7885 1.393539 CTTTATCCACAACGTCAGCGG 59.606 52.381 0.00 0.00 43.45 5.52
2601 7886 1.017177 TTATCCACAACGTCAGCGGC 61.017 55.000 0.00 0.00 43.45 6.53
2626 7911 3.728373 GGGATGGGGTCGGTTGCT 61.728 66.667 0.00 0.00 0.00 3.91
2627 7912 2.438434 GGATGGGGTCGGTTGCTG 60.438 66.667 0.00 0.00 0.00 4.41
2628 7913 3.134127 GATGGGGTCGGTTGCTGC 61.134 66.667 0.00 0.00 0.00 5.25
2629 7914 3.628646 GATGGGGTCGGTTGCTGCT 62.629 63.158 0.00 0.00 0.00 4.24
2630 7915 3.210012 ATGGGGTCGGTTGCTGCTT 62.210 57.895 0.00 0.00 0.00 3.91
2631 7916 1.847798 ATGGGGTCGGTTGCTGCTTA 61.848 55.000 0.00 0.00 0.00 3.09
2632 7917 1.077716 GGGGTCGGTTGCTGCTTAT 60.078 57.895 0.00 0.00 0.00 1.73
2633 7918 1.095807 GGGGTCGGTTGCTGCTTATC 61.096 60.000 0.00 0.00 0.00 1.75
2634 7919 1.095807 GGGTCGGTTGCTGCTTATCC 61.096 60.000 0.00 0.00 0.00 2.59
2635 7920 1.429148 GGTCGGTTGCTGCTTATCCG 61.429 60.000 14.93 14.93 42.12 4.18
2636 7921 0.739813 GTCGGTTGCTGCTTATCCGT 60.740 55.000 18.23 0.00 41.58 4.69
2637 7922 0.036765 TCGGTTGCTGCTTATCCGTT 60.037 50.000 18.23 0.00 41.58 4.44
2638 7923 0.373716 CGGTTGCTGCTTATCCGTTC 59.626 55.000 0.00 0.00 36.99 3.95
2639 7924 0.733150 GGTTGCTGCTTATCCGTTCC 59.267 55.000 0.00 0.00 0.00 3.62
2640 7925 1.679032 GGTTGCTGCTTATCCGTTCCT 60.679 52.381 0.00 0.00 0.00 3.36
2641 7926 2.084546 GTTGCTGCTTATCCGTTCCTT 58.915 47.619 0.00 0.00 0.00 3.36
2642 7927 2.024176 TGCTGCTTATCCGTTCCTTC 57.976 50.000 0.00 0.00 0.00 3.46
2643 7928 0.931005 GCTGCTTATCCGTTCCTTCG 59.069 55.000 0.00 0.00 0.00 3.79
2644 7929 1.739371 GCTGCTTATCCGTTCCTTCGT 60.739 52.381 0.00 0.00 0.00 3.85
2645 7930 2.618053 CTGCTTATCCGTTCCTTCGTT 58.382 47.619 0.00 0.00 0.00 3.85
2646 7931 2.603560 CTGCTTATCCGTTCCTTCGTTC 59.396 50.000 0.00 0.00 0.00 3.95
2647 7932 1.587034 GCTTATCCGTTCCTTCGTTCG 59.413 52.381 0.00 0.00 0.00 3.95
2648 7933 2.872370 CTTATCCGTTCCTTCGTTCGT 58.128 47.619 0.00 0.00 0.00 3.85
2649 7934 3.248266 CTTATCCGTTCCTTCGTTCGTT 58.752 45.455 0.00 0.00 0.00 3.85
2650 7935 1.706443 ATCCGTTCCTTCGTTCGTTC 58.294 50.000 0.00 0.00 0.00 3.95
2651 7936 0.318955 TCCGTTCCTTCGTTCGTTCC 60.319 55.000 0.00 0.00 0.00 3.62
2652 7937 0.319297 CCGTTCCTTCGTTCGTTCCT 60.319 55.000 0.00 0.00 0.00 3.36
2653 7938 1.058404 CGTTCCTTCGTTCGTTCCTC 58.942 55.000 0.00 0.00 0.00 3.71
2654 7939 1.426423 GTTCCTTCGTTCGTTCCTCC 58.574 55.000 0.00 0.00 0.00 4.30
2655 7940 1.000618 GTTCCTTCGTTCGTTCCTCCT 59.999 52.381 0.00 0.00 0.00 3.69
2656 7941 0.886563 TCCTTCGTTCGTTCCTCCTC 59.113 55.000 0.00 0.00 0.00 3.71
2657 7942 0.601558 CCTTCGTTCGTTCCTCCTCA 59.398 55.000 0.00 0.00 0.00 3.86
2658 7943 1.402984 CCTTCGTTCGTTCCTCCTCAG 60.403 57.143 0.00 0.00 0.00 3.35
2659 7944 0.038526 TTCGTTCGTTCCTCCTCAGC 60.039 55.000 0.00 0.00 0.00 4.26
2660 7945 0.894184 TCGTTCGTTCCTCCTCAGCT 60.894 55.000 0.00 0.00 0.00 4.24
2661 7946 0.456995 CGTTCGTTCCTCCTCAGCTC 60.457 60.000 0.00 0.00 0.00 4.09
2662 7947 0.108567 GTTCGTTCCTCCTCAGCTCC 60.109 60.000 0.00 0.00 0.00 4.70
2663 7948 0.541998 TTCGTTCCTCCTCAGCTCCA 60.542 55.000 0.00 0.00 0.00 3.86
2664 7949 0.541998 TCGTTCCTCCTCAGCTCCAA 60.542 55.000 0.00 0.00 0.00 3.53
2665 7950 0.390472 CGTTCCTCCTCAGCTCCAAC 60.390 60.000 0.00 0.00 0.00 3.77
2666 7951 0.035915 GTTCCTCCTCAGCTCCAACC 60.036 60.000 0.00 0.00 0.00 3.77
2667 7952 0.178891 TTCCTCCTCAGCTCCAACCT 60.179 55.000 0.00 0.00 0.00 3.50
2668 7953 0.616111 TCCTCCTCAGCTCCAACCTC 60.616 60.000 0.00 0.00 0.00 3.85
2669 7954 1.621672 CCTCCTCAGCTCCAACCTCC 61.622 65.000 0.00 0.00 0.00 4.30
2670 7955 0.906756 CTCCTCAGCTCCAACCTCCA 60.907 60.000 0.00 0.00 0.00 3.86
2671 7956 0.473694 TCCTCAGCTCCAACCTCCAA 60.474 55.000 0.00 0.00 0.00 3.53
2672 7957 0.035630 CCTCAGCTCCAACCTCCAAG 60.036 60.000 0.00 0.00 0.00 3.61
2673 7958 0.035630 CTCAGCTCCAACCTCCAAGG 60.036 60.000 0.00 0.00 42.49 3.61
2674 7959 1.676967 CAGCTCCAACCTCCAAGGC 60.677 63.158 0.00 0.00 39.63 4.35
2675 7960 2.747855 GCTCCAACCTCCAAGGCG 60.748 66.667 0.00 0.00 39.63 5.52
2676 7961 2.045926 CTCCAACCTCCAAGGCGG 60.046 66.667 0.00 0.00 39.63 6.13
2677 7962 4.344865 TCCAACCTCCAAGGCGGC 62.345 66.667 0.00 0.00 39.63 6.53
2686 7971 3.726517 CAAGGCGGCGGTGTTCTG 61.727 66.667 9.78 0.00 0.00 3.02
2687 7972 3.936203 AAGGCGGCGGTGTTCTGA 61.936 61.111 9.78 0.00 0.00 3.27
2688 7973 4.681978 AGGCGGCGGTGTTCTGAC 62.682 66.667 9.78 0.00 0.00 3.51
2694 7979 2.657296 CGGTGTTCTGACGCACGT 60.657 61.111 0.00 0.00 38.03 4.49
2695 7980 2.645510 CGGTGTTCTGACGCACGTC 61.646 63.158 15.94 15.94 44.77 4.34
2703 7988 2.872001 GACGCACGTCGCTCTCTG 60.872 66.667 7.51 0.00 43.23 3.35
2706 7991 4.427661 GCACGTCGCTCTCTGCCT 62.428 66.667 0.00 0.00 38.78 4.75
2707 7992 2.505777 CACGTCGCTCTCTGCCTG 60.506 66.667 0.00 0.00 38.78 4.85
2708 7993 4.427661 ACGTCGCTCTCTGCCTGC 62.428 66.667 0.00 0.00 38.78 4.85
2710 7995 3.768922 GTCGCTCTCTGCCTGCCT 61.769 66.667 0.00 0.00 38.78 4.75
2711 7996 3.767806 TCGCTCTCTGCCTGCCTG 61.768 66.667 0.00 0.00 38.78 4.85
2712 7997 3.767806 CGCTCTCTGCCTGCCTGA 61.768 66.667 0.00 0.00 38.78 3.86
2713 7998 2.667418 GCTCTCTGCCTGCCTGAA 59.333 61.111 0.00 0.00 35.15 3.02
2714 7999 1.744741 GCTCTCTGCCTGCCTGAAC 60.745 63.158 0.00 0.00 35.15 3.18
2715 8000 1.078567 CTCTCTGCCTGCCTGAACC 60.079 63.158 0.00 0.00 0.00 3.62
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 5.066593 AGTCTTTTGAGCCAAGTAAGAAGG 58.933 41.667 0.00 0.00 26.96 3.46
13 14 8.992835 ATCATTCAATAAAAGTCTTTTGAGCC 57.007 30.769 18.89 0.00 34.19 4.70
124 128 7.356089 TCCGGTATAGTCATTTGTCATAGTT 57.644 36.000 0.00 0.00 0.00 2.24
179 183 2.417339 TGTCTCCAACGAACTCGAAG 57.583 50.000 6.05 0.00 43.02 3.79
188 192 4.865365 GGAAAAGAGTCTATGTCTCCAACG 59.135 45.833 0.00 0.00 32.93 4.10
274 279 7.013274 CCAATAACTCCAACTTTGAGAAACTGA 59.987 37.037 0.00 0.00 0.00 3.41
418 1034 3.133141 AGTCTCCAAAGCTTCCTGAAC 57.867 47.619 0.00 0.00 0.00 3.18
521 1137 9.889128 TGTTTGTGTTATCATGAGAATATGAGA 57.111 29.630 5.98 0.00 40.16 3.27
522 1138 9.926751 GTGTTTGTGTTATCATGAGAATATGAG 57.073 33.333 5.98 0.00 40.16 2.90
523 1139 9.671279 AGTGTTTGTGTTATCATGAGAATATGA 57.329 29.630 5.98 0.00 41.00 2.15
526 1142 9.500785 TGAAGTGTTTGTGTTATCATGAGAATA 57.499 29.630 5.98 0.07 0.00 1.75
527 1143 8.394971 TGAAGTGTTTGTGTTATCATGAGAAT 57.605 30.769 5.98 0.00 0.00 2.40
528 1144 7.800155 TGAAGTGTTTGTGTTATCATGAGAA 57.200 32.000 0.09 0.00 0.00 2.87
547 1163 5.049129 GTCAAAGCTGATAGCAACTTGAAGT 60.049 40.000 0.00 0.00 45.56 3.01
622 3525 5.153950 AGTTCTACAAAGGATCGCTCTTT 57.846 39.130 0.00 0.00 35.09 2.52
684 3587 9.869844 GCAATTCAGTACATAACATAGATTGAC 57.130 33.333 0.00 0.00 0.00 3.18
695 5885 9.982291 GTATTTCGAAAGCAATTCAGTACATAA 57.018 29.630 16.80 0.00 37.96 1.90
756 5947 0.672401 GGGCGAGACGACAAAATGGA 60.672 55.000 0.00 0.00 36.10 3.41
805 5996 5.801350 AATGTAAAGTCCACATGTCATCG 57.199 39.130 0.00 0.00 36.74 3.84
806 5997 8.677300 ACATTAATGTAAAGTCCACATGTCATC 58.323 33.333 19.51 0.00 39.68 2.92
807 5998 8.579850 ACATTAATGTAAAGTCCACATGTCAT 57.420 30.769 19.51 0.00 39.68 3.06
808 5999 7.994425 ACATTAATGTAAAGTCCACATGTCA 57.006 32.000 19.51 0.00 39.68 3.58
809 6000 9.128107 CAAACATTAATGTAAAGTCCACATGTC 57.872 33.333 21.07 0.00 40.80 3.06
810 6001 8.087750 CCAAACATTAATGTAAAGTCCACATGT 58.912 33.333 21.07 0.00 40.80 3.21
811 6002 8.087750 ACCAAACATTAATGTAAAGTCCACATG 58.912 33.333 21.07 7.78 40.80 3.21
812 6003 8.189119 ACCAAACATTAATGTAAAGTCCACAT 57.811 30.769 21.07 0.00 40.80 3.21
813 6004 7.589958 ACCAAACATTAATGTAAAGTCCACA 57.410 32.000 21.07 0.00 40.80 4.17
829 6020 9.295825 TGAATGTCTCTGTAAATAACCAAACAT 57.704 29.630 0.00 0.00 0.00 2.71
830 6021 8.684386 TGAATGTCTCTGTAAATAACCAAACA 57.316 30.769 0.00 0.00 0.00 2.83
831 6022 9.394477 GTTGAATGTCTCTGTAAATAACCAAAC 57.606 33.333 0.00 0.00 0.00 2.93
832 6023 8.573035 GGTTGAATGTCTCTGTAAATAACCAAA 58.427 33.333 0.00 0.00 35.23 3.28
833 6024 7.094975 CGGTTGAATGTCTCTGTAAATAACCAA 60.095 37.037 0.00 0.00 34.92 3.67
834 6025 6.370442 CGGTTGAATGTCTCTGTAAATAACCA 59.630 38.462 0.00 0.00 34.92 3.67
835 6026 6.592607 TCGGTTGAATGTCTCTGTAAATAACC 59.407 38.462 0.00 0.00 0.00 2.85
836 6027 7.591006 TCGGTTGAATGTCTCTGTAAATAAC 57.409 36.000 0.00 0.00 0.00 1.89
837 6028 7.333423 CCTTCGGTTGAATGTCTCTGTAAATAA 59.667 37.037 0.00 0.00 32.61 1.40
838 6029 6.816640 CCTTCGGTTGAATGTCTCTGTAAATA 59.183 38.462 0.00 0.00 32.61 1.40
839 6030 5.643777 CCTTCGGTTGAATGTCTCTGTAAAT 59.356 40.000 0.00 0.00 32.61 1.40
840 6031 4.994852 CCTTCGGTTGAATGTCTCTGTAAA 59.005 41.667 0.00 0.00 32.61 2.01
841 6032 4.282449 TCCTTCGGTTGAATGTCTCTGTAA 59.718 41.667 0.00 0.00 32.61 2.41
842 6033 3.830178 TCCTTCGGTTGAATGTCTCTGTA 59.170 43.478 0.00 0.00 32.61 2.74
843 6034 2.632996 TCCTTCGGTTGAATGTCTCTGT 59.367 45.455 0.00 0.00 32.61 3.41
844 6035 3.257393 CTCCTTCGGTTGAATGTCTCTG 58.743 50.000 0.00 0.00 32.61 3.35
845 6036 2.354203 GCTCCTTCGGTTGAATGTCTCT 60.354 50.000 0.00 0.00 32.61 3.10
846 6037 2.003301 GCTCCTTCGGTTGAATGTCTC 58.997 52.381 0.00 0.00 32.61 3.36
847 6038 1.339151 GGCTCCTTCGGTTGAATGTCT 60.339 52.381 0.00 0.00 32.61 3.41
848 6039 1.087501 GGCTCCTTCGGTTGAATGTC 58.912 55.000 0.00 0.00 32.61 3.06
849 6040 0.322546 GGGCTCCTTCGGTTGAATGT 60.323 55.000 0.00 0.00 32.61 2.71
850 6041 1.369091 CGGGCTCCTTCGGTTGAATG 61.369 60.000 0.00 0.00 32.61 2.67
851 6042 1.078426 CGGGCTCCTTCGGTTGAAT 60.078 57.895 0.00 0.00 32.61 2.57
852 6043 1.550130 ATCGGGCTCCTTCGGTTGAA 61.550 55.000 0.00 0.00 0.00 2.69
858 6049 2.026301 GTCGATCGGGCTCCTTCG 59.974 66.667 16.41 0.00 0.00 3.79
967 6158 0.442699 GGCGAGTTTAAGAGTTGGCG 59.557 55.000 0.00 0.00 0.00 5.69
973 6164 3.795638 GCGGGGCGAGTTTAAGAG 58.204 61.111 0.00 0.00 0.00 2.85
994 6186 1.590147 GAAGCGAGGAACGGAAGGA 59.410 57.895 0.00 0.00 42.83 3.36
1001 6193 0.172803 TTAGCGAGGAAGCGAGGAAC 59.827 55.000 0.00 0.00 43.00 3.62
1266 6506 1.993956 CTCTCCGTCTCCATCATCCT 58.006 55.000 0.00 0.00 0.00 3.24
1633 6881 1.182667 TACGTACATCCTGCAGCAGT 58.817 50.000 21.26 8.63 0.00 4.40
1647 6895 4.155826 GCGGTACATACCATACCATACGTA 59.844 45.833 8.76 0.00 46.80 3.57
1650 6898 3.258872 TGGCGGTACATACCATACCATAC 59.741 47.826 8.76 0.00 46.80 2.39
1712 6960 3.428589 GCAGGAAGAAATTGTGAGCATCC 60.429 47.826 0.00 0.00 0.00 3.51
1724 6972 4.842531 TGATGATGGTAGCAGGAAGAAA 57.157 40.909 0.00 0.00 0.00 2.52
1756 7004 5.604565 CATCATCATTGACTAGTGCCAGTA 58.395 41.667 0.00 0.00 33.85 2.74
1767 7015 1.605232 TCGCCATGCATCATCATTGAC 59.395 47.619 0.00 0.00 33.85 3.18
1770 7018 1.878088 GTCTCGCCATGCATCATCATT 59.122 47.619 0.00 0.00 0.00 2.57
1771 7019 1.520494 GTCTCGCCATGCATCATCAT 58.480 50.000 0.00 0.00 0.00 2.45
1773 7021 0.250209 AGGTCTCGCCATGCATCATC 60.250 55.000 0.00 0.00 40.61 2.92
1785 7070 3.226347 GACGAATTTTTGCAAGGTCTCG 58.774 45.455 16.59 16.59 0.00 4.04
1866 7151 0.254178 CCTGAACCCCTGATGGACAG 59.746 60.000 0.00 0.00 45.36 3.51
1927 7212 3.791928 CGAGTCGCCGATGGAGTCG 62.792 68.421 0.00 11.27 46.82 4.18
1976 7261 3.706594 CTGAGACTGGGATTACTGGCTTA 59.293 47.826 0.00 0.00 0.00 3.09
1993 7278 2.592194 GACGATAAACACGCACTGAGA 58.408 47.619 0.00 0.00 0.00 3.27
1994 7279 1.317611 CGACGATAAACACGCACTGAG 59.682 52.381 0.00 0.00 0.00 3.35
2001 7286 1.818850 ACGGATCGACGATAAACACG 58.181 50.000 10.97 12.41 37.61 4.49
2009 7294 0.599466 AGATCGCTACGGATCGACGA 60.599 55.000 0.00 0.00 45.90 4.20
2010 7295 0.451299 CAGATCGCTACGGATCGACG 60.451 60.000 0.00 0.00 45.90 5.12
2011 7296 0.866427 TCAGATCGCTACGGATCGAC 59.134 55.000 0.00 0.00 45.90 4.20
2074 7359 3.370061 GGGTTATTCAACTGACAGCGTAC 59.630 47.826 1.25 0.00 34.88 3.67
2075 7360 3.592059 GGGTTATTCAACTGACAGCGTA 58.408 45.455 1.25 0.00 34.88 4.42
2088 7373 0.106149 ATGTCTCCGCGGGGTTATTC 59.894 55.000 27.35 11.92 33.83 1.75
2114 7399 1.154818 CGTCGGTCTCGATCGATCG 60.155 63.158 35.91 35.91 46.39 3.69
2116 7401 1.933005 GACGTCGGTCTCGATCGAT 59.067 57.895 19.78 0.00 46.39 3.59
2141 7426 4.221703 AGGATGACACTAGAACAAGTCAGG 59.778 45.833 0.00 0.00 43.39 3.86
2142 7427 5.398603 AGGATGACACTAGAACAAGTCAG 57.601 43.478 0.00 0.00 43.39 3.51
2146 7431 6.260936 ACAAACAAGGATGACACTAGAACAAG 59.739 38.462 0.00 0.00 0.00 3.16
2155 7440 4.385358 AAACCACAAACAAGGATGACAC 57.615 40.909 0.00 0.00 0.00 3.67
2157 7442 4.825085 TCCTAAACCACAAACAAGGATGAC 59.175 41.667 0.00 0.00 0.00 3.06
2172 7457 7.217906 CCTGACAGTATCCTTTATCCTAAACC 58.782 42.308 0.93 0.00 0.00 3.27
2181 7466 5.450453 CTCTCTCCCTGACAGTATCCTTTA 58.550 45.833 0.93 0.00 0.00 1.85
2185 7470 1.960689 GCTCTCTCCCTGACAGTATCC 59.039 57.143 0.93 0.00 0.00 2.59
2196 7481 2.997897 ACCACGTGGCTCTCTCCC 60.998 66.667 34.26 0.00 39.32 4.30
2197 7482 2.574399 GACCACGTGGCTCTCTCC 59.426 66.667 34.26 10.82 39.32 3.71
2198 7483 2.179517 CGACCACGTGGCTCTCTC 59.820 66.667 34.26 21.74 39.32 3.20
2199 7484 3.374402 CCGACCACGTGGCTCTCT 61.374 66.667 34.26 15.00 39.32 3.10
2200 7485 3.343788 CTCCGACCACGTGGCTCTC 62.344 68.421 34.26 22.48 39.32 3.20
2201 7486 3.374402 CTCCGACCACGTGGCTCT 61.374 66.667 34.26 15.85 39.32 4.09
2204 7489 2.845752 TATTGCTCCGACCACGTGGC 62.846 60.000 34.26 24.14 39.32 5.01
2205 7490 0.179084 ATATTGCTCCGACCACGTGG 60.179 55.000 32.83 32.83 42.17 4.94
2206 7491 2.124903 GTATATTGCTCCGACCACGTG 58.875 52.381 9.08 9.08 37.88 4.49
2207 7492 2.029623 AGTATATTGCTCCGACCACGT 58.970 47.619 0.00 0.00 37.88 4.49
2208 7493 2.293677 AGAGTATATTGCTCCGACCACG 59.706 50.000 4.09 0.00 39.43 4.94
2209 7494 3.553096 CCAGAGTATATTGCTCCGACCAC 60.553 52.174 4.09 0.00 33.69 4.16
2210 7495 2.628178 CCAGAGTATATTGCTCCGACCA 59.372 50.000 4.09 0.00 33.69 4.02
2211 7496 2.610727 GCCAGAGTATATTGCTCCGACC 60.611 54.545 4.09 0.00 33.69 4.79
2212 7497 2.610727 GGCCAGAGTATATTGCTCCGAC 60.611 54.545 0.00 0.00 33.69 4.79
2213 7498 1.618837 GGCCAGAGTATATTGCTCCGA 59.381 52.381 0.00 0.00 33.69 4.55
2214 7499 1.344438 TGGCCAGAGTATATTGCTCCG 59.656 52.381 0.00 0.00 33.69 4.63
2215 7500 2.370189 ACTGGCCAGAGTATATTGCTCC 59.630 50.000 39.19 0.00 33.69 4.70
2216 7501 3.760580 ACTGGCCAGAGTATATTGCTC 57.239 47.619 39.19 0.00 0.00 4.26
2217 7502 4.227197 AGTACTGGCCAGAGTATATTGCT 58.773 43.478 39.19 19.88 31.14 3.91
2218 7503 4.608948 AGTACTGGCCAGAGTATATTGC 57.391 45.455 39.19 17.86 31.14 3.56
2219 7504 7.039714 TGACATAGTACTGGCCAGAGTATATTG 60.040 40.741 39.19 24.95 31.14 1.90
2220 7505 7.010771 TGACATAGTACTGGCCAGAGTATATT 58.989 38.462 39.19 18.97 31.14 1.28
2221 7506 6.552932 TGACATAGTACTGGCCAGAGTATAT 58.447 40.000 39.19 24.40 31.14 0.86
2222 7507 5.948842 TGACATAGTACTGGCCAGAGTATA 58.051 41.667 39.19 23.38 31.14 1.47
2223 7508 4.804597 TGACATAGTACTGGCCAGAGTAT 58.195 43.478 39.19 26.84 31.14 2.12
2224 7509 4.207955 CTGACATAGTACTGGCCAGAGTA 58.792 47.826 39.19 25.97 0.00 2.59
2225 7510 3.027412 CTGACATAGTACTGGCCAGAGT 58.973 50.000 39.19 24.79 0.00 3.24
2226 7511 3.027412 ACTGACATAGTACTGGCCAGAG 58.973 50.000 39.19 23.23 38.04 3.35
2227 7512 2.760650 CACTGACATAGTACTGGCCAGA 59.239 50.000 39.19 19.62 37.60 3.86
2228 7513 2.739932 GCACTGACATAGTACTGGCCAG 60.740 54.545 31.60 31.60 37.60 4.85
2229 7514 1.207089 GCACTGACATAGTACTGGCCA 59.793 52.381 4.71 4.71 37.60 5.36
2230 7515 1.473434 GGCACTGACATAGTACTGGCC 60.473 57.143 5.39 0.00 37.60 5.36
2231 7516 1.482593 AGGCACTGACATAGTACTGGC 59.517 52.381 5.39 0.00 37.60 4.85
2232 7517 2.760650 TGAGGCACTGACATAGTACTGG 59.239 50.000 5.39 0.00 41.55 4.00
2233 7518 3.696548 TCTGAGGCACTGACATAGTACTG 59.303 47.826 5.39 0.00 41.55 2.74
2234 7519 3.969553 TCTGAGGCACTGACATAGTACT 58.030 45.455 0.00 0.00 41.55 2.73
2235 7520 4.720649 TTCTGAGGCACTGACATAGTAC 57.279 45.455 0.00 0.00 41.55 2.73
2236 7521 4.382040 GCTTTCTGAGGCACTGACATAGTA 60.382 45.833 0.00 0.00 41.55 1.82
2237 7522 3.618507 GCTTTCTGAGGCACTGACATAGT 60.619 47.826 0.00 0.00 41.55 2.12
2238 7523 2.935201 GCTTTCTGAGGCACTGACATAG 59.065 50.000 0.00 0.00 41.55 2.23
2239 7524 2.302733 TGCTTTCTGAGGCACTGACATA 59.697 45.455 3.83 0.00 41.55 2.29
2240 7525 1.072806 TGCTTTCTGAGGCACTGACAT 59.927 47.619 3.83 0.00 41.55 3.06
2241 7526 0.469494 TGCTTTCTGAGGCACTGACA 59.531 50.000 3.83 0.00 41.55 3.58
2242 7527 1.534595 CTTGCTTTCTGAGGCACTGAC 59.465 52.381 6.84 0.00 41.55 3.51
2243 7528 1.888215 CTTGCTTTCTGAGGCACTGA 58.112 50.000 6.84 0.00 41.55 3.41
2244 7529 0.240411 GCTTGCTTTCTGAGGCACTG 59.760 55.000 6.84 5.27 41.55 3.66
2246 7531 0.240411 CTGCTTGCTTTCTGAGGCAC 59.760 55.000 6.84 0.00 38.23 5.01
2247 7532 1.521450 GCTGCTTGCTTTCTGAGGCA 61.521 55.000 0.00 3.83 38.95 4.75
2248 7533 1.212229 GCTGCTTGCTTTCTGAGGC 59.788 57.895 0.00 0.00 38.95 4.70
2258 7543 1.605710 TCTTTCAGTCAAGCTGCTTGC 59.394 47.619 32.02 26.06 44.66 4.01
2259 7544 3.136763 TCTCTTTCAGTCAAGCTGCTTG 58.863 45.455 31.26 31.26 44.66 4.01
2260 7545 3.070734 TCTCTCTTTCAGTCAAGCTGCTT 59.929 43.478 9.53 9.53 44.66 3.91
2261 7546 2.632028 TCTCTCTTTCAGTCAAGCTGCT 59.368 45.455 0.00 0.00 44.66 4.24
2262 7547 2.995258 CTCTCTCTTTCAGTCAAGCTGC 59.005 50.000 0.00 0.00 44.66 5.25
2263 7548 4.517952 TCTCTCTCTTTCAGTCAAGCTG 57.482 45.455 0.00 0.00 46.34 4.24
2264 7549 5.543507 TTTCTCTCTCTTTCAGTCAAGCT 57.456 39.130 0.00 0.00 0.00 3.74
2265 7550 6.610741 TTTTTCTCTCTCTTTCAGTCAAGC 57.389 37.500 0.00 0.00 0.00 4.01
2285 7570 8.972349 GCACTACGTACTCTAGTTAAAGTTTTT 58.028 33.333 0.00 0.00 0.00 1.94
2286 7571 8.355913 AGCACTACGTACTCTAGTTAAAGTTTT 58.644 33.333 0.00 0.00 0.00 2.43
2287 7572 7.880105 AGCACTACGTACTCTAGTTAAAGTTT 58.120 34.615 0.00 0.00 0.00 2.66
2288 7573 7.446001 AGCACTACGTACTCTAGTTAAAGTT 57.554 36.000 0.00 0.00 0.00 2.66
2289 7574 8.729805 ATAGCACTACGTACTCTAGTTAAAGT 57.270 34.615 0.00 0.00 0.00 2.66
2290 7575 8.824781 TGATAGCACTACGTACTCTAGTTAAAG 58.175 37.037 0.00 0.00 0.00 1.85
2291 7576 8.722480 TGATAGCACTACGTACTCTAGTTAAA 57.278 34.615 0.00 0.00 0.00 1.52
2292 7577 8.771766 CATGATAGCACTACGTACTCTAGTTAA 58.228 37.037 0.00 0.00 0.00 2.01
2293 7578 7.930325 ACATGATAGCACTACGTACTCTAGTTA 59.070 37.037 0.00 0.00 0.00 2.24
2294 7579 6.766944 ACATGATAGCACTACGTACTCTAGTT 59.233 38.462 0.00 0.00 0.00 2.24
2295 7580 6.289834 ACATGATAGCACTACGTACTCTAGT 58.710 40.000 0.00 0.00 0.00 2.57
2296 7581 6.788684 ACATGATAGCACTACGTACTCTAG 57.211 41.667 0.00 0.00 0.00 2.43
2297 7582 8.667076 TTAACATGATAGCACTACGTACTCTA 57.333 34.615 0.00 0.00 0.00 2.43
2298 7583 7.282675 ACTTAACATGATAGCACTACGTACTCT 59.717 37.037 0.00 0.00 0.00 3.24
2299 7584 7.416022 ACTTAACATGATAGCACTACGTACTC 58.584 38.462 0.00 0.00 0.00 2.59
2300 7585 7.330900 ACTTAACATGATAGCACTACGTACT 57.669 36.000 0.00 0.00 0.00 2.73
2301 7586 7.699391 TGAACTTAACATGATAGCACTACGTAC 59.301 37.037 0.00 0.00 0.00 3.67
2302 7587 7.699391 GTGAACTTAACATGATAGCACTACGTA 59.301 37.037 0.00 0.00 0.00 3.57
2303 7588 6.530534 GTGAACTTAACATGATAGCACTACGT 59.469 38.462 0.00 0.00 0.00 3.57
2304 7589 6.752351 AGTGAACTTAACATGATAGCACTACG 59.248 38.462 0.00 0.00 32.86 3.51
2305 7590 8.383619 CAAGTGAACTTAACATGATAGCACTAC 58.616 37.037 0.00 0.00 34.08 2.73
2306 7591 7.549134 CCAAGTGAACTTAACATGATAGCACTA 59.451 37.037 0.00 0.00 34.08 2.74
2307 7592 6.372659 CCAAGTGAACTTAACATGATAGCACT 59.627 38.462 0.00 2.30 35.79 4.40
2308 7593 6.546395 CCAAGTGAACTTAACATGATAGCAC 58.454 40.000 0.00 0.00 34.28 4.40
2309 7594 5.123820 GCCAAGTGAACTTAACATGATAGCA 59.876 40.000 0.00 0.00 34.28 3.49
2310 7595 5.449177 GGCCAAGTGAACTTAACATGATAGC 60.449 44.000 0.00 0.00 34.28 2.97
2311 7596 5.647658 TGGCCAAGTGAACTTAACATGATAG 59.352 40.000 0.61 0.00 34.28 2.08
2312 7597 5.565509 TGGCCAAGTGAACTTAACATGATA 58.434 37.500 0.61 0.00 34.28 2.15
2313 7598 4.406456 TGGCCAAGTGAACTTAACATGAT 58.594 39.130 0.61 0.00 34.28 2.45
2314 7599 3.826524 TGGCCAAGTGAACTTAACATGA 58.173 40.909 0.61 0.00 34.28 3.07
2315 7600 4.549458 CTTGGCCAAGTGAACTTAACATG 58.451 43.478 33.46 7.24 34.28 3.21
2316 7601 3.005791 GCTTGGCCAAGTGAACTTAACAT 59.994 43.478 38.87 0.00 40.45 2.71
2317 7602 2.360801 GCTTGGCCAAGTGAACTTAACA 59.639 45.455 38.87 6.04 40.45 2.41
2318 7603 2.360801 TGCTTGGCCAAGTGAACTTAAC 59.639 45.455 38.87 22.87 40.45 2.01
2319 7604 2.660572 TGCTTGGCCAAGTGAACTTAA 58.339 42.857 38.87 16.65 40.45 1.85
2320 7605 2.356665 TGCTTGGCCAAGTGAACTTA 57.643 45.000 38.87 18.28 40.45 2.24
2321 7606 1.708341 ATGCTTGGCCAAGTGAACTT 58.292 45.000 38.87 21.26 40.45 2.66
2322 7607 2.584835 TATGCTTGGCCAAGTGAACT 57.415 45.000 38.87 23.60 40.45 3.01
2323 7608 2.736400 GCATATGCTTGGCCAAGTGAAC 60.736 50.000 38.87 25.77 40.45 3.18
2324 7609 1.477700 GCATATGCTTGGCCAAGTGAA 59.522 47.619 38.87 27.42 40.45 3.18
2325 7610 1.105457 GCATATGCTTGGCCAAGTGA 58.895 50.000 38.87 28.44 40.45 3.41
2326 7611 0.818938 TGCATATGCTTGGCCAAGTG 59.181 50.000 38.87 30.63 42.66 3.16
2327 7612 0.819582 GTGCATATGCTTGGCCAAGT 59.180 50.000 38.87 26.33 42.66 3.16
2328 7613 0.248743 CGTGCATATGCTTGGCCAAG 60.249 55.000 36.58 36.58 42.66 3.61
2329 7614 0.679321 TCGTGCATATGCTTGGCCAA 60.679 50.000 27.13 19.25 42.66 4.52
2330 7615 1.077858 TCGTGCATATGCTTGGCCA 60.078 52.632 27.13 0.00 42.66 5.36
2331 7616 1.097547 ACTCGTGCATATGCTTGGCC 61.098 55.000 27.13 0.00 42.66 5.36
2332 7617 0.305922 GACTCGTGCATATGCTTGGC 59.694 55.000 27.13 13.31 42.66 4.52
2333 7618 1.596260 CTGACTCGTGCATATGCTTGG 59.404 52.381 27.13 16.15 42.66 3.61
2334 7619 1.004185 GCTGACTCGTGCATATGCTTG 60.004 52.381 27.13 18.99 42.66 4.01
2335 7620 1.293924 GCTGACTCGTGCATATGCTT 58.706 50.000 27.13 7.54 42.66 3.91
2336 7621 0.531532 GGCTGACTCGTGCATATGCT 60.532 55.000 27.13 7.70 42.66 3.79
2337 7622 0.811219 TGGCTGACTCGTGCATATGC 60.811 55.000 21.09 21.09 42.50 3.14
2338 7623 1.655484 TTGGCTGACTCGTGCATATG 58.345 50.000 0.00 0.00 0.00 1.78
2339 7624 2.283298 CTTTGGCTGACTCGTGCATAT 58.717 47.619 0.00 0.00 0.00 1.78
2340 7625 1.675714 CCTTTGGCTGACTCGTGCATA 60.676 52.381 0.00 0.00 0.00 3.14
2341 7626 0.957395 CCTTTGGCTGACTCGTGCAT 60.957 55.000 0.00 0.00 0.00 3.96
2342 7627 1.597854 CCTTTGGCTGACTCGTGCA 60.598 57.895 0.00 0.00 0.00 4.57
2343 7628 1.598130 ACCTTTGGCTGACTCGTGC 60.598 57.895 0.00 0.00 0.00 5.34
2344 7629 0.249868 TCACCTTTGGCTGACTCGTG 60.250 55.000 0.00 0.00 0.00 4.35
2345 7630 0.468226 TTCACCTTTGGCTGACTCGT 59.532 50.000 0.00 0.00 0.00 4.18
2346 7631 1.813513 ATTCACCTTTGGCTGACTCG 58.186 50.000 0.00 0.00 0.00 4.18
2347 7632 4.037923 TGAAAATTCACCTTTGGCTGACTC 59.962 41.667 0.00 0.00 31.01 3.36
2348 7633 3.960102 TGAAAATTCACCTTTGGCTGACT 59.040 39.130 0.00 0.00 31.01 3.41
2349 7634 4.320608 TGAAAATTCACCTTTGGCTGAC 57.679 40.909 0.00 0.00 31.01 3.51
2361 7646 4.439974 GCCATCTTATGCCGTGAAAATTCA 60.440 41.667 0.00 0.00 34.20 2.57
2362 7647 4.044426 GCCATCTTATGCCGTGAAAATTC 58.956 43.478 0.00 0.00 0.00 2.17
2363 7648 3.489059 CGCCATCTTATGCCGTGAAAATT 60.489 43.478 0.00 0.00 0.00 1.82
2364 7649 2.033299 CGCCATCTTATGCCGTGAAAAT 59.967 45.455 0.00 0.00 0.00 1.82
2365 7650 1.400142 CGCCATCTTATGCCGTGAAAA 59.600 47.619 0.00 0.00 0.00 2.29
2366 7651 1.013596 CGCCATCTTATGCCGTGAAA 58.986 50.000 0.00 0.00 0.00 2.69
2367 7652 1.436195 GCGCCATCTTATGCCGTGAA 61.436 55.000 0.00 0.00 0.00 3.18
2368 7653 1.887242 GCGCCATCTTATGCCGTGA 60.887 57.895 0.00 0.00 0.00 4.35
2369 7654 2.633657 GCGCCATCTTATGCCGTG 59.366 61.111 0.00 0.00 0.00 4.94
2370 7655 2.967076 CGCGCCATCTTATGCCGT 60.967 61.111 0.00 0.00 0.00 5.68
2371 7656 2.661537 TCGCGCCATCTTATGCCG 60.662 61.111 0.00 0.00 0.00 5.69
2372 7657 1.160329 AACTCGCGCCATCTTATGCC 61.160 55.000 0.00 0.00 0.00 4.40
2373 7658 1.192534 GTAACTCGCGCCATCTTATGC 59.807 52.381 0.00 0.00 0.00 3.14
2374 7659 2.743938 AGTAACTCGCGCCATCTTATG 58.256 47.619 0.00 0.00 0.00 1.90
2375 7660 3.454371 AAGTAACTCGCGCCATCTTAT 57.546 42.857 0.00 0.00 0.00 1.73
2376 7661 2.927477 CAAAGTAACTCGCGCCATCTTA 59.073 45.455 0.00 0.00 0.00 2.10
2377 7662 1.732259 CAAAGTAACTCGCGCCATCTT 59.268 47.619 0.00 0.00 0.00 2.40
2378 7663 1.337823 ACAAAGTAACTCGCGCCATCT 60.338 47.619 0.00 0.00 0.00 2.90
2379 7664 1.076332 ACAAAGTAACTCGCGCCATC 58.924 50.000 0.00 0.00 0.00 3.51
2380 7665 0.796312 CACAAAGTAACTCGCGCCAT 59.204 50.000 0.00 0.00 0.00 4.40
2381 7666 1.225376 CCACAAAGTAACTCGCGCCA 61.225 55.000 0.00 0.00 0.00 5.69
2382 7667 0.947180 TCCACAAAGTAACTCGCGCC 60.947 55.000 0.00 0.00 0.00 6.53
2383 7668 0.438830 CTCCACAAAGTAACTCGCGC 59.561 55.000 0.00 0.00 0.00 6.86
2384 7669 1.719780 GACTCCACAAAGTAACTCGCG 59.280 52.381 0.00 0.00 0.00 5.87
2385 7670 2.067013 GGACTCCACAAAGTAACTCGC 58.933 52.381 0.00 0.00 0.00 5.03
2386 7671 3.380479 TGGACTCCACAAAGTAACTCG 57.620 47.619 0.00 0.00 0.00 4.18
2398 7683 4.485653 TCCTATCATATGGTGGACTCCA 57.514 45.455 0.00 0.00 42.01 3.86
2399 7684 5.026121 TCATCCTATCATATGGTGGACTCC 58.974 45.833 0.00 0.00 0.00 3.85
2400 7685 6.183360 GGATCATCCTATCATATGGTGGACTC 60.183 46.154 0.00 5.80 32.53 3.36
2401 7686 5.664908 GGATCATCCTATCATATGGTGGACT 59.335 44.000 0.00 0.00 32.53 3.85
2402 7687 5.426509 TGGATCATCCTATCATATGGTGGAC 59.573 44.000 4.96 0.00 37.46 4.02
2403 7688 5.426509 GTGGATCATCCTATCATATGGTGGA 59.573 44.000 4.96 7.66 37.46 4.02
2404 7689 5.678583 GTGGATCATCCTATCATATGGTGG 58.321 45.833 4.96 0.00 37.46 4.61
2405 7690 5.127682 TCGTGGATCATCCTATCATATGGTG 59.872 44.000 4.96 0.00 37.46 4.17
2406 7691 5.272402 TCGTGGATCATCCTATCATATGGT 58.728 41.667 4.96 0.00 37.46 3.55
2407 7692 5.221402 CCTCGTGGATCATCCTATCATATGG 60.221 48.000 4.96 0.00 37.46 2.74
2408 7693 5.595952 TCCTCGTGGATCATCCTATCATATG 59.404 44.000 4.96 0.00 37.46 1.78
2409 7694 5.596361 GTCCTCGTGGATCATCCTATCATAT 59.404 44.000 9.83 0.00 45.29 1.78
2410 7695 4.950475 GTCCTCGTGGATCATCCTATCATA 59.050 45.833 9.83 0.00 45.29 2.15
2411 7696 3.766591 GTCCTCGTGGATCATCCTATCAT 59.233 47.826 9.83 0.00 45.29 2.45
2412 7697 3.157881 GTCCTCGTGGATCATCCTATCA 58.842 50.000 9.83 0.00 45.29 2.15
2413 7698 3.192422 CAGTCCTCGTGGATCATCCTATC 59.808 52.174 9.83 0.00 45.29 2.08
2414 7699 3.161067 CAGTCCTCGTGGATCATCCTAT 58.839 50.000 9.83 0.00 45.29 2.57
2415 7700 2.587522 CAGTCCTCGTGGATCATCCTA 58.412 52.381 9.83 0.00 45.29 2.94
2416 7701 1.407936 CAGTCCTCGTGGATCATCCT 58.592 55.000 9.83 0.00 45.29 3.24
2417 7702 0.390860 CCAGTCCTCGTGGATCATCC 59.609 60.000 9.83 0.00 45.29 3.51
2418 7703 1.339610 CTCCAGTCCTCGTGGATCATC 59.660 57.143 9.83 0.00 43.33 2.92
2419 7704 1.407936 CTCCAGTCCTCGTGGATCAT 58.592 55.000 9.83 0.00 43.33 2.45
2420 7705 0.684479 CCTCCAGTCCTCGTGGATCA 60.684 60.000 9.83 0.00 43.33 2.92
2421 7706 0.395862 TCCTCCAGTCCTCGTGGATC 60.396 60.000 9.83 3.95 43.33 3.36
2422 7707 0.684805 GTCCTCCAGTCCTCGTGGAT 60.685 60.000 9.83 0.00 43.33 3.41
2423 7708 1.304217 GTCCTCCAGTCCTCGTGGA 60.304 63.158 1.10 1.10 42.06 4.02
2424 7709 2.352032 GGTCCTCCAGTCCTCGTGG 61.352 68.421 0.00 0.00 36.28 4.94
2425 7710 0.900647 AAGGTCCTCCAGTCCTCGTG 60.901 60.000 0.00 0.00 35.89 4.35
2426 7711 0.702902 TAAGGTCCTCCAGTCCTCGT 59.297 55.000 0.00 0.00 35.89 4.18
2427 7712 2.074729 ATAAGGTCCTCCAGTCCTCG 57.925 55.000 0.00 0.00 35.89 4.63
2428 7713 4.384318 GGAAAATAAGGTCCTCCAGTCCTC 60.384 50.000 0.00 0.00 35.89 3.71
2429 7714 3.523972 GGAAAATAAGGTCCTCCAGTCCT 59.476 47.826 0.00 0.00 35.89 3.85
2430 7715 3.681874 CGGAAAATAAGGTCCTCCAGTCC 60.682 52.174 0.00 0.00 35.89 3.85
2431 7716 3.197116 TCGGAAAATAAGGTCCTCCAGTC 59.803 47.826 0.00 0.00 35.89 3.51
2432 7717 3.178865 TCGGAAAATAAGGTCCTCCAGT 58.821 45.455 0.00 0.00 35.89 4.00
2433 7718 3.197983 ACTCGGAAAATAAGGTCCTCCAG 59.802 47.826 0.00 0.00 35.89 3.86
2434 7719 3.178865 ACTCGGAAAATAAGGTCCTCCA 58.821 45.455 0.00 0.00 35.89 3.86
2435 7720 3.908643 ACTCGGAAAATAAGGTCCTCC 57.091 47.619 0.00 0.00 0.00 4.30
2436 7721 5.975282 AGTTACTCGGAAAATAAGGTCCTC 58.025 41.667 0.00 0.00 0.00 3.71
2437 7722 6.370186 AAGTTACTCGGAAAATAAGGTCCT 57.630 37.500 0.00 0.00 0.00 3.85
2438 7723 5.583854 GGAAGTTACTCGGAAAATAAGGTCC 59.416 44.000 0.00 0.00 0.00 4.46
2439 7724 5.290400 CGGAAGTTACTCGGAAAATAAGGTC 59.710 44.000 0.00 0.00 0.00 3.85
2440 7725 5.173664 CGGAAGTTACTCGGAAAATAAGGT 58.826 41.667 0.00 0.00 0.00 3.50
2441 7726 4.569564 CCGGAAGTTACTCGGAAAATAAGG 59.430 45.833 6.66 0.00 45.96 2.69
2442 7727 4.033702 GCCGGAAGTTACTCGGAAAATAAG 59.966 45.833 15.29 0.00 45.96 1.73
2443 7728 3.934579 GCCGGAAGTTACTCGGAAAATAA 59.065 43.478 15.29 0.00 45.96 1.40
2444 7729 3.524541 GCCGGAAGTTACTCGGAAAATA 58.475 45.455 15.29 0.00 45.96 1.40
2445 7730 2.353323 GCCGGAAGTTACTCGGAAAAT 58.647 47.619 15.29 0.00 45.96 1.82
2446 7731 1.608801 GGCCGGAAGTTACTCGGAAAA 60.609 52.381 15.29 0.00 45.96 2.29
2447 7732 0.037046 GGCCGGAAGTTACTCGGAAA 60.037 55.000 15.29 0.00 45.96 3.13
2448 7733 1.186917 TGGCCGGAAGTTACTCGGAA 61.187 55.000 15.29 1.38 45.96 4.30
2449 7734 1.186917 TTGGCCGGAAGTTACTCGGA 61.187 55.000 15.29 0.00 45.96 4.55
2450 7735 0.739813 CTTGGCCGGAAGTTACTCGG 60.740 60.000 5.05 7.96 45.84 4.63
2451 7736 0.037605 ACTTGGCCGGAAGTTACTCG 60.038 55.000 5.05 0.00 31.92 4.18
2452 7737 2.180432 AACTTGGCCGGAAGTTACTC 57.820 50.000 17.29 0.00 43.00 2.59
2453 7738 2.651382 AAACTTGGCCGGAAGTTACT 57.349 45.000 18.67 4.73 43.83 2.24
2454 7739 2.030540 GGAAAACTTGGCCGGAAGTTAC 60.031 50.000 18.67 15.36 43.83 2.50
2455 7740 2.158579 AGGAAAACTTGGCCGGAAGTTA 60.159 45.455 18.67 0.00 43.83 2.24
2456 7741 1.037493 GGAAAACTTGGCCGGAAGTT 58.963 50.000 13.97 13.97 46.02 2.66
2457 7742 0.185175 AGGAAAACTTGGCCGGAAGT 59.815 50.000 5.05 3.63 37.81 3.01
2458 7743 0.881796 GAGGAAAACTTGGCCGGAAG 59.118 55.000 5.05 2.81 0.00 3.46
2459 7744 0.476771 AGAGGAAAACTTGGCCGGAA 59.523 50.000 5.05 0.00 0.00 4.30
2460 7745 1.278127 CTAGAGGAAAACTTGGCCGGA 59.722 52.381 5.05 0.00 0.00 5.14
2461 7746 1.278127 TCTAGAGGAAAACTTGGCCGG 59.722 52.381 0.00 0.00 0.00 6.13
2462 7747 2.762535 TCTAGAGGAAAACTTGGCCG 57.237 50.000 0.00 0.00 0.00 6.13
2471 7756 5.548406 CGGAAGGAAGTTTTCTAGAGGAAA 58.452 41.667 0.00 0.00 41.58 3.13
2472 7757 5.148651 CGGAAGGAAGTTTTCTAGAGGAA 57.851 43.478 0.00 0.00 0.00 3.36
2473 7758 4.803098 CGGAAGGAAGTTTTCTAGAGGA 57.197 45.455 0.00 0.00 0.00 3.71
2495 7780 8.456471 ACTCTTTTATTTGCTCGGGTAATTAAC 58.544 33.333 0.69 0.00 0.00 2.01
2496 7781 8.570068 ACTCTTTTATTTGCTCGGGTAATTAA 57.430 30.769 0.00 0.00 0.00 1.40
2497 7782 7.010738 CGACTCTTTTATTTGCTCGGGTAATTA 59.989 37.037 0.00 0.00 0.00 1.40
2498 7783 6.183360 CGACTCTTTTATTTGCTCGGGTAATT 60.183 38.462 0.00 0.00 0.00 1.40
2499 7784 5.293569 CGACTCTTTTATTTGCTCGGGTAAT 59.706 40.000 0.00 0.00 0.00 1.89
2500 7785 4.628333 CGACTCTTTTATTTGCTCGGGTAA 59.372 41.667 0.00 0.00 0.00 2.85
2501 7786 4.178540 CGACTCTTTTATTTGCTCGGGTA 58.821 43.478 0.00 0.00 0.00 3.69
2502 7787 3.000727 CGACTCTTTTATTTGCTCGGGT 58.999 45.455 0.00 0.00 0.00 5.28
2503 7788 2.351726 CCGACTCTTTTATTTGCTCGGG 59.648 50.000 0.00 0.00 36.41 5.14
2504 7789 3.259064 TCCGACTCTTTTATTTGCTCGG 58.741 45.455 0.00 0.00 40.46 4.63
2505 7790 4.031878 GTCTCCGACTCTTTTATTTGCTCG 59.968 45.833 0.00 0.00 0.00 5.03
2506 7791 4.031878 CGTCTCCGACTCTTTTATTTGCTC 59.968 45.833 0.00 0.00 35.63 4.26
2507 7792 3.927142 CGTCTCCGACTCTTTTATTTGCT 59.073 43.478 0.00 0.00 35.63 3.91
2508 7793 3.062234 CCGTCTCCGACTCTTTTATTTGC 59.938 47.826 0.00 0.00 35.63 3.68
2509 7794 3.062234 GCCGTCTCCGACTCTTTTATTTG 59.938 47.826 0.00 0.00 35.63 2.32
2510 7795 3.259902 GCCGTCTCCGACTCTTTTATTT 58.740 45.455 0.00 0.00 35.63 1.40
2511 7796 2.734492 CGCCGTCTCCGACTCTTTTATT 60.734 50.000 0.00 0.00 35.63 1.40
2512 7797 1.202268 CGCCGTCTCCGACTCTTTTAT 60.202 52.381 0.00 0.00 35.63 1.40
2513 7798 0.169672 CGCCGTCTCCGACTCTTTTA 59.830 55.000 0.00 0.00 35.63 1.52
2514 7799 1.080705 CGCCGTCTCCGACTCTTTT 60.081 57.895 0.00 0.00 35.63 2.27
2515 7800 1.521450 TTCGCCGTCTCCGACTCTTT 61.521 55.000 0.00 0.00 34.01 2.52
2516 7801 1.924320 CTTCGCCGTCTCCGACTCTT 61.924 60.000 0.00 0.00 34.01 2.85
2517 7802 2.359602 TTCGCCGTCTCCGACTCT 60.360 61.111 0.00 0.00 34.01 3.24
2518 7803 1.919956 TTCTTCGCCGTCTCCGACTC 61.920 60.000 0.00 0.00 34.01 3.36
2519 7804 1.313812 ATTCTTCGCCGTCTCCGACT 61.314 55.000 0.00 0.00 34.01 4.18
2520 7805 1.139095 ATTCTTCGCCGTCTCCGAC 59.861 57.895 0.00 0.00 34.01 4.79
2521 7806 1.138883 CATTCTTCGCCGTCTCCGA 59.861 57.895 0.00 0.00 35.63 4.55
2522 7807 1.878522 CCATTCTTCGCCGTCTCCG 60.879 63.158 0.00 0.00 0.00 4.63
2523 7808 2.174319 GCCATTCTTCGCCGTCTCC 61.174 63.158 0.00 0.00 0.00 3.71
2524 7809 2.174319 GGCCATTCTTCGCCGTCTC 61.174 63.158 0.00 0.00 34.94 3.36
2525 7810 2.125106 GGCCATTCTTCGCCGTCT 60.125 61.111 0.00 0.00 34.94 4.18
2529 7814 2.439156 AGCTGGCCATTCTTCGCC 60.439 61.111 5.51 0.00 45.92 5.54
2530 7815 2.796651 CAGCTGGCCATTCTTCGC 59.203 61.111 5.51 4.77 0.00 4.70
2531 7816 1.381928 ATGCAGCTGGCCATTCTTCG 61.382 55.000 17.12 0.00 43.89 3.79
2532 7817 0.102481 CATGCAGCTGGCCATTCTTC 59.898 55.000 17.12 1.43 43.89 2.87
2533 7818 1.956629 GCATGCAGCTGGCCATTCTT 61.957 55.000 17.12 0.00 43.89 2.52
2534 7819 2.423898 GCATGCAGCTGGCCATTCT 61.424 57.895 17.12 3.38 43.89 2.40
2535 7820 2.106332 GCATGCAGCTGGCCATTC 59.894 61.111 17.12 0.41 43.89 2.67
2536 7821 3.833645 CGCATGCAGCTGGCCATT 61.834 61.111 19.57 0.00 43.89 3.16
2547 7832 4.602696 GCCGAGTCATGCGCATGC 62.603 66.667 39.11 32.30 38.65 4.06
2548 7833 4.289379 CGCCGAGTCATGCGCATG 62.289 66.667 38.48 38.48 44.64 4.06
2566 7851 0.808755 ATAAAGCAAAACCGGCGGAG 59.191 50.000 35.78 19.44 36.08 4.63
2567 7852 0.806241 GATAAAGCAAAACCGGCGGA 59.194 50.000 35.78 6.82 36.08 5.54
2568 7853 0.179148 GGATAAAGCAAAACCGGCGG 60.179 55.000 27.06 27.06 36.08 6.13
2569 7854 0.523966 TGGATAAAGCAAAACCGGCG 59.476 50.000 0.00 0.00 36.08 6.46
2570 7855 1.271102 TGTGGATAAAGCAAAACCGGC 59.729 47.619 0.00 0.00 0.00 6.13
2571 7856 3.313690 GTTGTGGATAAAGCAAAACCGG 58.686 45.455 0.00 0.00 0.00 5.28
2572 7857 2.977169 CGTTGTGGATAAAGCAAAACCG 59.023 45.455 0.00 0.00 0.00 4.44
2573 7858 3.972403 ACGTTGTGGATAAAGCAAAACC 58.028 40.909 0.00 0.00 0.00 3.27
2574 7859 4.602995 TGACGTTGTGGATAAAGCAAAAC 58.397 39.130 0.00 0.00 0.00 2.43
2575 7860 4.791411 GCTGACGTTGTGGATAAAGCAAAA 60.791 41.667 0.00 0.00 0.00 2.44
2576 7861 3.304391 GCTGACGTTGTGGATAAAGCAAA 60.304 43.478 0.00 0.00 0.00 3.68
2577 7862 2.225491 GCTGACGTTGTGGATAAAGCAA 59.775 45.455 0.00 0.00 0.00 3.91
2578 7863 1.804151 GCTGACGTTGTGGATAAAGCA 59.196 47.619 0.00 0.00 0.00 3.91
2579 7864 1.201921 CGCTGACGTTGTGGATAAAGC 60.202 52.381 0.00 0.00 33.53 3.51
2580 7865 1.393539 CCGCTGACGTTGTGGATAAAG 59.606 52.381 14.42 0.00 37.26 1.85
2581 7866 1.434555 CCGCTGACGTTGTGGATAAA 58.565 50.000 14.42 0.00 37.26 1.40
2582 7867 1.017177 GCCGCTGACGTTGTGGATAA 61.017 55.000 21.14 0.00 37.26 1.75
2583 7868 1.447140 GCCGCTGACGTTGTGGATA 60.447 57.895 21.14 0.00 37.26 2.59
2584 7869 2.742372 GCCGCTGACGTTGTGGAT 60.742 61.111 21.14 0.00 37.26 3.41
2609 7894 3.728373 AGCAACCGACCCCATCCC 61.728 66.667 0.00 0.00 0.00 3.85
2610 7895 2.438434 CAGCAACCGACCCCATCC 60.438 66.667 0.00 0.00 0.00 3.51
2611 7896 3.134127 GCAGCAACCGACCCCATC 61.134 66.667 0.00 0.00 0.00 3.51
2612 7897 1.847798 TAAGCAGCAACCGACCCCAT 61.848 55.000 0.00 0.00 0.00 4.00
2613 7898 1.847798 ATAAGCAGCAACCGACCCCA 61.848 55.000 0.00 0.00 0.00 4.96
2614 7899 1.077716 ATAAGCAGCAACCGACCCC 60.078 57.895 0.00 0.00 0.00 4.95
2615 7900 1.095807 GGATAAGCAGCAACCGACCC 61.096 60.000 0.00 0.00 0.00 4.46
2616 7901 1.429148 CGGATAAGCAGCAACCGACC 61.429 60.000 12.11 0.00 45.31 4.79
2617 7902 0.739813 ACGGATAAGCAGCAACCGAC 60.740 55.000 20.48 0.00 45.31 4.79
2618 7903 0.036765 AACGGATAAGCAGCAACCGA 60.037 50.000 20.48 0.00 45.31 4.69
2620 7905 0.733150 GGAACGGATAAGCAGCAACC 59.267 55.000 0.00 0.00 0.00 3.77
2621 7906 1.739067 AGGAACGGATAAGCAGCAAC 58.261 50.000 0.00 0.00 0.00 4.17
2622 7907 2.356135 GAAGGAACGGATAAGCAGCAA 58.644 47.619 0.00 0.00 0.00 3.91
2623 7908 1.739035 CGAAGGAACGGATAAGCAGCA 60.739 52.381 0.00 0.00 0.00 4.41
2624 7909 0.931005 CGAAGGAACGGATAAGCAGC 59.069 55.000 0.00 0.00 0.00 5.25
2625 7910 2.295253 ACGAAGGAACGGATAAGCAG 57.705 50.000 0.00 0.00 37.61 4.24
2626 7911 2.613691 GAACGAAGGAACGGATAAGCA 58.386 47.619 0.00 0.00 37.61 3.91
2627 7912 1.587034 CGAACGAAGGAACGGATAAGC 59.413 52.381 0.00 0.00 37.61 3.09
2628 7913 2.872370 ACGAACGAAGGAACGGATAAG 58.128 47.619 0.14 0.00 37.61 1.73
2629 7914 3.244976 GAACGAACGAAGGAACGGATAA 58.755 45.455 0.14 0.00 37.61 1.75
2630 7915 2.415893 GGAACGAACGAAGGAACGGATA 60.416 50.000 0.14 0.00 37.61 2.59
2631 7916 1.670967 GGAACGAACGAAGGAACGGAT 60.671 52.381 0.14 0.00 37.61 4.18
2632 7917 0.318955 GGAACGAACGAAGGAACGGA 60.319 55.000 0.14 0.00 37.61 4.69
2633 7918 0.319297 AGGAACGAACGAAGGAACGG 60.319 55.000 0.14 0.00 37.61 4.44
2634 7919 1.058404 GAGGAACGAACGAAGGAACG 58.942 55.000 0.14 0.00 39.31 3.95
2635 7920 1.000618 AGGAGGAACGAACGAAGGAAC 59.999 52.381 0.14 0.00 0.00 3.62
2636 7921 1.271656 GAGGAGGAACGAACGAAGGAA 59.728 52.381 0.14 0.00 0.00 3.36
2637 7922 0.886563 GAGGAGGAACGAACGAAGGA 59.113 55.000 0.14 0.00 0.00 3.36
2638 7923 0.601558 TGAGGAGGAACGAACGAAGG 59.398 55.000 0.14 0.00 0.00 3.46
2639 7924 1.983972 CTGAGGAGGAACGAACGAAG 58.016 55.000 0.14 0.00 0.00 3.79
2640 7925 0.038526 GCTGAGGAGGAACGAACGAA 60.039 55.000 0.14 0.00 0.00 3.85
2641 7926 0.894184 AGCTGAGGAGGAACGAACGA 60.894 55.000 0.14 0.00 0.00 3.85
2642 7927 0.456995 GAGCTGAGGAGGAACGAACG 60.457 60.000 0.00 0.00 0.00 3.95
2643 7928 0.108567 GGAGCTGAGGAGGAACGAAC 60.109 60.000 0.00 0.00 0.00 3.95
2644 7929 0.541998 TGGAGCTGAGGAGGAACGAA 60.542 55.000 0.00 0.00 0.00 3.85
2645 7930 0.541998 TTGGAGCTGAGGAGGAACGA 60.542 55.000 0.00 0.00 0.00 3.85
2646 7931 0.390472 GTTGGAGCTGAGGAGGAACG 60.390 60.000 0.00 0.00 0.00 3.95
2647 7932 0.035915 GGTTGGAGCTGAGGAGGAAC 60.036 60.000 0.00 0.00 0.00 3.62
2648 7933 0.178891 AGGTTGGAGCTGAGGAGGAA 60.179 55.000 0.00 0.00 0.00 3.36
2649 7934 0.616111 GAGGTTGGAGCTGAGGAGGA 60.616 60.000 0.00 0.00 0.00 3.71
2650 7935 1.621672 GGAGGTTGGAGCTGAGGAGG 61.622 65.000 0.00 0.00 0.00 4.30
2651 7936 0.906756 TGGAGGTTGGAGCTGAGGAG 60.907 60.000 0.00 0.00 0.00 3.69
2652 7937 0.473694 TTGGAGGTTGGAGCTGAGGA 60.474 55.000 0.00 0.00 0.00 3.71
2653 7938 0.035630 CTTGGAGGTTGGAGCTGAGG 60.036 60.000 0.00 0.00 0.00 3.86
2654 7939 0.035630 CCTTGGAGGTTGGAGCTGAG 60.036 60.000 0.00 0.00 0.00 3.35
2655 7940 2.069776 CCTTGGAGGTTGGAGCTGA 58.930 57.895 0.00 0.00 0.00 4.26
2656 7941 1.676967 GCCTTGGAGGTTGGAGCTG 60.677 63.158 0.00 0.00 37.80 4.24
2657 7942 2.759795 GCCTTGGAGGTTGGAGCT 59.240 61.111 0.00 0.00 37.80 4.09
2658 7943 2.747855 CGCCTTGGAGGTTGGAGC 60.748 66.667 0.00 0.00 37.80 4.70
2659 7944 2.045926 CCGCCTTGGAGGTTGGAG 60.046 66.667 1.04 0.00 42.00 3.86
2660 7945 4.344865 GCCGCCTTGGAGGTTGGA 62.345 66.667 10.97 0.00 42.00 3.53
2669 7954 3.726517 CAGAACACCGCCGCCTTG 61.727 66.667 0.00 0.00 0.00 3.61
2670 7955 3.936203 TCAGAACACCGCCGCCTT 61.936 61.111 0.00 0.00 0.00 4.35
2671 7956 4.681978 GTCAGAACACCGCCGCCT 62.682 66.667 0.00 0.00 0.00 5.52
2675 7960 3.712881 GTGCGTCAGAACACCGCC 61.713 66.667 0.00 0.00 46.44 6.13
2677 7962 2.645510 GACGTGCGTCAGAACACCG 61.646 63.158 18.32 0.00 44.02 4.94
2678 7963 2.645510 CGACGTGCGTCAGAACACC 61.646 63.158 21.98 0.00 44.77 4.16
2679 7964 2.837280 CGACGTGCGTCAGAACAC 59.163 61.111 21.98 0.00 44.77 3.32
2680 7965 3.028019 GCGACGTGCGTCAGAACA 61.028 61.111 21.98 0.00 44.77 3.18
2696 7981 1.744741 GTTCAGGCAGGCAGAGAGC 60.745 63.158 0.00 0.00 44.65 4.09
2697 7982 1.078567 GGTTCAGGCAGGCAGAGAG 60.079 63.158 0.00 0.00 0.00 3.20
2698 7983 3.072476 GGTTCAGGCAGGCAGAGA 58.928 61.111 0.00 0.00 0.00 3.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.