Multiple sequence alignment - TraesCS3B01G146400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G146400 chr3B 100.000 7607 0 0 1 7607 136440603 136448209 0.000000e+00 14048.0
1 TraesCS3B01G146400 chr3B 96.859 191 2 1 3038 3224 226085868 226085678 4.430000e-82 316.0
2 TraesCS3B01G146400 chr3B 95.025 201 5 2 3032 3227 798393496 798393696 2.060000e-80 311.0
3 TraesCS3B01G146400 chr3B 90.000 100 6 2 6883 6982 746845654 746845749 8.010000e-25 126.0
4 TraesCS3B01G146400 chr3D 96.308 2546 75 11 3219 5750 86335494 86338034 0.000000e+00 4163.0
5 TraesCS3B01G146400 chr3D 96.191 1969 67 4 1076 3037 86333534 86335501 0.000000e+00 3214.0
6 TraesCS3B01G146400 chr3D 94.025 1272 41 11 5745 6994 86338588 86339846 0.000000e+00 1895.0
7 TraesCS3B01G146400 chr3D 86.759 506 25 17 491 972 86332600 86333087 6.760000e-145 525.0
8 TraesCS3B01G146400 chr3D 84.932 365 32 11 6995 7355 86339891 86340236 1.570000e-91 348.0
9 TraesCS3B01G146400 chr3D 87.387 111 5 5 6883 6992 460938104 460938002 1.340000e-22 119.0
10 TraesCS3B01G146400 chr3A 96.413 1840 51 8 3219 5048 102618858 102620692 0.000000e+00 3018.0
11 TraesCS3B01G146400 chr3A 94.300 1386 60 11 1077 2449 102616695 102618074 0.000000e+00 2104.0
12 TraesCS3B01G146400 chr3A 94.497 1272 47 9 5745 6994 102621082 102622352 0.000000e+00 1940.0
13 TraesCS3B01G146400 chr3A 97.529 607 12 1 2434 3037 102618259 102618865 0.000000e+00 1035.0
14 TraesCS3B01G146400 chr3A 94.920 374 9 4 660 1026 102615744 102616114 1.840000e-160 577.0
15 TraesCS3B01G146400 chr3A 82.639 576 65 18 6994 7565 102622394 102622938 1.920000e-130 477.0
16 TraesCS3B01G146400 chr3A 88.288 111 6 5 6884 6994 582283215 582283318 8.010000e-25 126.0
17 TraesCS3B01G146400 chr3A 100.000 29 0 0 6855 6883 17516779 17516807 4.000000e-03 54.7
18 TraesCS3B01G146400 chr1B 91.899 1901 114 25 811 2697 372911786 372913660 0.000000e+00 2621.0
19 TraesCS3B01G146400 chr1B 94.975 199 6 1 3030 3224 288396615 288396813 7.410000e-80 309.0
20 TraesCS3B01G146400 chr7B 93.939 1221 62 7 1487 2700 326392930 326394145 0.000000e+00 1834.0
21 TraesCS3B01G146400 chr7B 90.507 611 42 9 811 1418 326392332 326392929 0.000000e+00 793.0
22 TraesCS3B01G146400 chr7B 96.078 204 4 1 3029 3228 127649407 127649204 5.690000e-86 329.0
23 TraesCS3B01G146400 chr7B 95.939 197 4 1 3033 3225 168758385 168758189 4.430000e-82 316.0
24 TraesCS3B01G146400 chr7B 81.699 153 12 10 5352 5502 683516412 683516274 6.240000e-21 113.0
25 TraesCS3B01G146400 chr2B 95.338 1094 37 9 1609 2700 189504489 189503408 0.000000e+00 1725.0
26 TraesCS3B01G146400 chr2B 86.529 824 66 19 810 1623 189512390 189511602 0.000000e+00 865.0
27 TraesCS3B01G146400 chr2B 96.078 51 2 0 1712 1762 756050330 756050280 4.890000e-12 84.2
28 TraesCS3B01G146400 chr6D 86.344 681 74 8 1893 2562 438004020 438003348 0.000000e+00 725.0
29 TraesCS3B01G146400 chr6D 84.416 154 11 4 5351 5504 426058450 426058310 1.030000e-28 139.0
30 TraesCS3B01G146400 chr6D 88.889 99 5 2 6884 6982 349988434 349988526 4.820000e-22 117.0
31 TraesCS3B01G146400 chr2D 86.885 549 59 7 1838 2386 605355298 605355833 3.040000e-168 603.0
32 TraesCS3B01G146400 chr2D 96.825 189 1 2 3034 3218 463789192 463789379 2.060000e-80 311.0
33 TraesCS3B01G146400 chr2D 87.387 111 9 3 6884 6994 399968916 399968811 1.040000e-23 122.0
34 TraesCS3B01G146400 chr2D 90.698 86 8 0 1759 1844 651698129 651698044 1.730000e-21 115.0
35 TraesCS3B01G146400 chr2D 100.000 29 0 0 6855 6883 101695454 101695426 4.000000e-03 54.7
36 TraesCS3B01G146400 chr2D 100.000 29 0 0 6855 6883 548076842 548076870 4.000000e-03 54.7
37 TraesCS3B01G146400 chr7D 86.521 549 61 7 1838 2386 6716799 6717334 6.570000e-165 592.0
38 TraesCS3B01G146400 chr7D 86.667 540 58 9 1847 2386 294648783 294648258 3.060000e-163 586.0
39 TraesCS3B01G146400 chr7D 97.143 35 1 0 5769 5803 250669810 250669776 8.240000e-05 60.2
40 TraesCS3B01G146400 chr7D 100.000 29 0 0 6855 6883 626135656 626135684 4.000000e-03 54.7
41 TraesCS3B01G146400 chr4D 85.574 305 41 3 4166 4469 179862033 179861731 4.430000e-82 316.0
42 TraesCS3B01G146400 chr4D 81.215 181 32 2 4862 5041 179860647 179860468 2.210000e-30 145.0
43 TraesCS3B01G146400 chr4D 90.698 86 8 0 1760 1845 320027052 320026967 1.730000e-21 115.0
44 TraesCS3B01G146400 chr4D 80.405 148 28 1 3895 4041 179862253 179862106 2.240000e-20 111.0
45 TraesCS3B01G146400 chr4D 82.292 96 10 3 5775 5863 417934341 417934246 8.190000e-10 76.8
46 TraesCS3B01G146400 chr5D 96.825 189 1 2 3034 3218 236022595 236022782 2.060000e-80 311.0
47 TraesCS3B01G146400 chr5D 83.333 210 18 8 998 1194 127878661 127878866 2.180000e-40 178.0
48 TraesCS3B01G146400 chr4B 85.570 298 42 1 4166 4463 322669468 322669764 2.060000e-80 311.0
49 TraesCS3B01G146400 chr4B 84.564 298 45 1 4166 4463 322744093 322744389 2.080000e-75 294.0
50 TraesCS3B01G146400 chr4B 80.132 151 29 1 3892 4041 322743871 322744021 2.240000e-20 111.0
51 TraesCS3B01G146400 chr4B 79.032 124 18 6 5772 5887 92657143 92657020 2.280000e-10 78.7
52 TraesCS3B01G146400 chr4B 76.271 118 21 4 5764 5874 438827516 438827633 1.000000e-03 56.5
53 TraesCS3B01G146400 chr5B 95.000 200 5 2 3031 3225 434671550 434671351 7.410000e-80 309.0
54 TraesCS3B01G146400 chr5B 90.805 87 8 0 1759 1845 262050958 262051044 4.820000e-22 117.0
55 TraesCS3B01G146400 chr4A 85.862 290 41 0 4166 4455 342447007 342447296 7.410000e-80 309.0
56 TraesCS3B01G146400 chr4A 80.663 181 33 2 4850 5029 342448389 342448568 1.030000e-28 139.0
57 TraesCS3B01G146400 chr4A 81.119 143 27 0 3899 4041 342446792 342446934 1.730000e-21 115.0
58 TraesCS3B01G146400 chr6B 94.949 198 6 1 3031 3224 708673062 708672865 2.670000e-79 307.0
59 TraesCS3B01G146400 chr6B 87.742 155 17 1 5351 5505 617175271 617175119 6.060000e-41 180.0
60 TraesCS3B01G146400 chr6B 84.967 153 10 3 5352 5504 641283809 641283670 7.960000e-30 143.0
61 TraesCS3B01G146400 chr6B 82.031 128 9 3 5378 5504 185678673 185678559 6.280000e-16 97.1
62 TraesCS3B01G146400 chr6A 83.766 154 12 4 5351 5504 570921359 570921219 4.790000e-27 134.0
63 TraesCS3B01G146400 chr7A 85.075 134 10 6 5371 5503 64614665 64614789 2.230000e-25 128.0
64 TraesCS3B01G146400 chr7A 87.500 112 11 2 6883 6994 732352150 732352042 8.010000e-25 126.0
65 TraesCS3B01G146400 chr7A 97.143 35 1 0 5769 5803 270772574 270772608 8.240000e-05 60.2
66 TraesCS3B01G146400 chr5A 86.607 112 8 2 6883 6994 660831251 660831147 4.820000e-22 117.0
67 TraesCS3B01G146400 chr5A 97.500 40 1 0 6843 6882 491288430 491288469 1.370000e-07 69.4
68 TraesCS3B01G146400 chr2A 90.698 86 8 0 1759 1844 775976663 775976748 1.730000e-21 115.0
69 TraesCS3B01G146400 chr1A 82.857 105 16 2 5346 5449 30280455 30280558 8.130000e-15 93.5
70 TraesCS3B01G146400 chr1A 92.593 54 1 2 5774 5824 62613160 62613213 2.940000e-09 75.0
71 TraesCS3B01G146400 chr1D 93.103 58 4 0 5446 5503 301236623 301236566 1.360000e-12 86.1
72 TraesCS3B01G146400 chr1D 89.796 49 2 2 5773 5818 432785051 432785003 8.240000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G146400 chr3B 136440603 136448209 7606 False 14048.000000 14048 100.000 1 7607 1 chr3B.!!$F1 7606
1 TraesCS3B01G146400 chr3D 86332600 86340236 7636 False 2029.000000 4163 91.643 491 7355 5 chr3D.!!$F1 6864
2 TraesCS3B01G146400 chr3A 102615744 102622938 7194 False 1525.166667 3018 93.383 660 7565 6 chr3A.!!$F3 6905
3 TraesCS3B01G146400 chr1B 372911786 372913660 1874 False 2621.000000 2621 91.899 811 2697 1 chr1B.!!$F2 1886
4 TraesCS3B01G146400 chr7B 326392332 326394145 1813 False 1313.500000 1834 92.223 811 2700 2 chr7B.!!$F1 1889
5 TraesCS3B01G146400 chr2B 189503408 189504489 1081 True 1725.000000 1725 95.338 1609 2700 1 chr2B.!!$R1 1091
6 TraesCS3B01G146400 chr2B 189511602 189512390 788 True 865.000000 865 86.529 810 1623 1 chr2B.!!$R2 813
7 TraesCS3B01G146400 chr6D 438003348 438004020 672 True 725.000000 725 86.344 1893 2562 1 chr6D.!!$R2 669
8 TraesCS3B01G146400 chr2D 605355298 605355833 535 False 603.000000 603 86.885 1838 2386 1 chr2D.!!$F3 548
9 TraesCS3B01G146400 chr7D 6716799 6717334 535 False 592.000000 592 86.521 1838 2386 1 chr7D.!!$F1 548
10 TraesCS3B01G146400 chr7D 294648258 294648783 525 True 586.000000 586 86.667 1847 2386 1 chr7D.!!$R2 539
11 TraesCS3B01G146400 chr4B 322743871 322744389 518 False 202.500000 294 82.348 3892 4463 2 chr4B.!!$F3 571

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
298 299 0.090178 CTCGCCGTCGTACGAAAAAC 59.910 55.000 21.39 7.17 46.05 2.43 F
420 421 0.110867 CGCTGAAATCGTTGTCGCAA 60.111 50.000 0.00 0.00 36.96 4.85 F
1298 1856 0.036306 CTTGGCGTTGTAGGGAAGGT 59.964 55.000 0.00 0.00 0.00 3.50 F
3111 3899 0.521291 TTACTGACCAAAGCGCATGC 59.479 50.000 11.47 7.91 43.24 4.06 F
3175 3963 0.109735 GTTTTGCCAACGCCTAGAGC 60.110 55.000 0.00 0.00 38.52 4.09 F
3549 4337 0.968405 TGCAACCTTTTCAGCATCCC 59.032 50.000 0.00 0.00 31.05 3.85 F
4296 5085 1.619827 GATGATCCAGAGCTCCAGAGG 59.380 57.143 10.93 7.93 0.00 3.69 F
5801 7166 1.135315 TCCGTCCGGAATTACTTGACG 60.135 52.381 17.86 17.86 46.05 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1265 1821 0.936297 GCCAAGCAGAACAAACAGCG 60.936 55.000 0.00 0.0 0.00 5.18 R
1418 1978 1.347320 GCCGGCATATACGCTAGAAC 58.653 55.000 24.80 0.0 0.00 3.01 R
3156 3944 0.109735 GCTCTAGGCGTTGGCAAAAC 60.110 55.000 0.00 0.0 42.47 2.43 R
5028 5827 3.115554 GCACACAACAAACATCAGGAAC 58.884 45.455 0.00 0.0 0.00 3.62 R
5121 5920 1.550976 GTGCTTAGCTGACCAGGTACT 59.449 52.381 5.60 0.0 40.65 2.73 R
5244 6044 1.538047 ACGCAGCAAGAAATCCATGT 58.462 45.000 0.00 0.0 0.00 3.21 R
6169 7536 1.621672 GCTGACCTTGCTAGCCCTCT 61.622 60.000 13.29 0.0 0.00 3.69 R
7482 8920 0.106217 GTGAGGGAGAGAGGAGGGAG 60.106 65.000 0.00 0.0 0.00 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.057548 TGCCCTGCAGCATCGTTG 61.058 61.111 8.66 0.00 38.00 4.10
18 19 3.058160 GCCCTGCAGCATCGTTGT 61.058 61.111 8.66 0.00 0.00 3.32
19 20 3.044059 GCCCTGCAGCATCGTTGTC 62.044 63.158 8.66 0.00 0.00 3.18
20 21 2.743752 CCCTGCAGCATCGTTGTCG 61.744 63.158 8.66 0.00 38.55 4.35
21 22 2.097160 CTGCAGCATCGTTGTCGC 59.903 61.111 0.00 0.00 36.96 5.19
22 23 2.664518 TGCAGCATCGTTGTCGCA 60.665 55.556 0.00 7.57 36.96 5.10
23 24 1.974249 CTGCAGCATCGTTGTCGCAT 61.974 55.000 0.00 0.00 36.96 4.73
24 25 1.297158 GCAGCATCGTTGTCGCATC 60.297 57.895 0.00 0.00 36.96 3.91
25 26 1.969809 GCAGCATCGTTGTCGCATCA 61.970 55.000 0.00 0.00 36.96 3.07
26 27 0.654160 CAGCATCGTTGTCGCATCAT 59.346 50.000 0.00 0.00 36.96 2.45
27 28 0.654160 AGCATCGTTGTCGCATCATG 59.346 50.000 0.00 0.00 36.96 3.07
28 29 0.374758 GCATCGTTGTCGCATCATGT 59.625 50.000 0.00 0.00 36.96 3.21
29 30 1.853253 GCATCGTTGTCGCATCATGTG 60.853 52.381 0.00 0.00 36.96 3.21
42 43 4.790810 CATCATGTGCTAGTGCTTGTAG 57.209 45.455 0.00 0.00 40.48 2.74
43 44 3.251479 TCATGTGCTAGTGCTTGTAGG 57.749 47.619 0.00 0.00 40.48 3.18
44 45 2.831526 TCATGTGCTAGTGCTTGTAGGA 59.168 45.455 0.00 0.00 40.48 2.94
45 46 3.452264 TCATGTGCTAGTGCTTGTAGGAT 59.548 43.478 0.00 0.00 40.48 3.24
46 47 4.649218 TCATGTGCTAGTGCTTGTAGGATA 59.351 41.667 0.00 0.00 40.48 2.59
47 48 5.128663 TCATGTGCTAGTGCTTGTAGGATAA 59.871 40.000 0.00 0.00 40.48 1.75
48 49 4.755411 TGTGCTAGTGCTTGTAGGATAAC 58.245 43.478 0.00 0.00 40.48 1.89
49 50 4.120589 GTGCTAGTGCTTGTAGGATAACC 58.879 47.826 0.00 0.00 40.48 2.85
50 51 3.181479 TGCTAGTGCTTGTAGGATAACCG 60.181 47.826 0.00 0.00 39.67 4.44
51 52 3.067742 GCTAGTGCTTGTAGGATAACCGA 59.932 47.826 0.00 0.00 37.47 4.69
52 53 3.521947 AGTGCTTGTAGGATAACCGAC 57.478 47.619 0.00 0.00 41.18 4.79
53 54 3.097614 AGTGCTTGTAGGATAACCGACT 58.902 45.455 4.02 0.00 41.34 4.18
54 55 3.130693 AGTGCTTGTAGGATAACCGACTC 59.869 47.826 4.02 0.00 41.34 3.36
55 56 3.093814 TGCTTGTAGGATAACCGACTCA 58.906 45.455 4.02 0.00 41.34 3.41
56 57 3.512329 TGCTTGTAGGATAACCGACTCAA 59.488 43.478 4.02 0.00 41.34 3.02
57 58 3.864003 GCTTGTAGGATAACCGACTCAAC 59.136 47.826 4.02 0.00 41.34 3.18
58 59 3.770263 TGTAGGATAACCGACTCAACG 57.230 47.619 4.02 0.00 41.34 4.10
59 60 2.159338 TGTAGGATAACCGACTCAACGC 60.159 50.000 4.02 0.00 41.34 4.84
60 61 0.175073 AGGATAACCGACTCAACGCC 59.825 55.000 0.00 0.00 41.83 5.68
61 62 0.808847 GGATAACCGACTCAACGCCC 60.809 60.000 0.00 0.00 0.00 6.13
62 63 1.143969 GATAACCGACTCAACGCCCG 61.144 60.000 0.00 0.00 0.00 6.13
63 64 3.919973 TAACCGACTCAACGCCCGC 62.920 63.158 0.00 0.00 0.00 6.13
66 67 4.072088 CGACTCAACGCCCGCAAC 62.072 66.667 0.00 0.00 0.00 4.17
67 68 2.970324 GACTCAACGCCCGCAACA 60.970 61.111 0.00 0.00 0.00 3.33
68 69 2.515057 ACTCAACGCCCGCAACAA 60.515 55.556 0.00 0.00 0.00 2.83
69 70 2.054140 GACTCAACGCCCGCAACAAA 62.054 55.000 0.00 0.00 0.00 2.83
70 71 1.064946 CTCAACGCCCGCAACAAAA 59.935 52.632 0.00 0.00 0.00 2.44
71 72 0.526524 CTCAACGCCCGCAACAAAAA 60.527 50.000 0.00 0.00 0.00 1.94
72 73 0.103208 TCAACGCCCGCAACAAAAAT 59.897 45.000 0.00 0.00 0.00 1.82
73 74 0.933796 CAACGCCCGCAACAAAAATT 59.066 45.000 0.00 0.00 0.00 1.82
74 75 1.070909 CAACGCCCGCAACAAAAATTC 60.071 47.619 0.00 0.00 0.00 2.17
75 76 0.387565 ACGCCCGCAACAAAAATTCT 59.612 45.000 0.00 0.00 0.00 2.40
76 77 1.202475 ACGCCCGCAACAAAAATTCTT 60.202 42.857 0.00 0.00 0.00 2.52
77 78 2.034812 ACGCCCGCAACAAAAATTCTTA 59.965 40.909 0.00 0.00 0.00 2.10
78 79 3.249917 CGCCCGCAACAAAAATTCTTAT 58.750 40.909 0.00 0.00 0.00 1.73
79 80 3.060628 CGCCCGCAACAAAAATTCTTATG 59.939 43.478 0.00 0.00 0.00 1.90
80 81 3.370672 GCCCGCAACAAAAATTCTTATGG 59.629 43.478 0.00 0.00 0.00 2.74
81 82 4.815269 CCCGCAACAAAAATTCTTATGGA 58.185 39.130 0.00 0.00 0.00 3.41
82 83 5.418676 CCCGCAACAAAAATTCTTATGGAT 58.581 37.500 0.00 0.00 0.00 3.41
83 84 5.519927 CCCGCAACAAAAATTCTTATGGATC 59.480 40.000 0.00 0.00 0.00 3.36
84 85 5.519927 CCGCAACAAAAATTCTTATGGATCC 59.480 40.000 4.20 4.20 0.00 3.36
85 86 5.519927 CGCAACAAAAATTCTTATGGATCCC 59.480 40.000 9.90 0.00 0.00 3.85
86 87 5.817296 GCAACAAAAATTCTTATGGATCCCC 59.183 40.000 9.90 0.00 0.00 4.81
110 111 3.575965 AAAATGATCGCCAGTTCCAAC 57.424 42.857 0.00 0.00 31.03 3.77
111 112 2.198827 AATGATCGCCAGTTCCAACA 57.801 45.000 0.00 0.00 0.00 3.33
112 113 2.198827 ATGATCGCCAGTTCCAACAA 57.801 45.000 0.00 0.00 0.00 2.83
113 114 1.974265 TGATCGCCAGTTCCAACAAA 58.026 45.000 0.00 0.00 0.00 2.83
114 115 2.302260 TGATCGCCAGTTCCAACAAAA 58.698 42.857 0.00 0.00 0.00 2.44
115 116 2.690497 TGATCGCCAGTTCCAACAAAAA 59.310 40.909 0.00 0.00 0.00 1.94
116 117 2.570442 TCGCCAGTTCCAACAAAAAC 57.430 45.000 0.00 0.00 0.00 2.43
117 118 1.819288 TCGCCAGTTCCAACAAAAACA 59.181 42.857 0.00 0.00 0.00 2.83
118 119 2.428890 TCGCCAGTTCCAACAAAAACAT 59.571 40.909 0.00 0.00 0.00 2.71
119 120 2.539274 CGCCAGTTCCAACAAAAACATG 59.461 45.455 0.00 0.00 0.00 3.21
120 121 3.736433 CGCCAGTTCCAACAAAAACATGA 60.736 43.478 0.00 0.00 0.00 3.07
121 122 3.555547 GCCAGTTCCAACAAAAACATGAC 59.444 43.478 0.00 0.00 0.00 3.06
122 123 4.680440 GCCAGTTCCAACAAAAACATGACT 60.680 41.667 0.00 0.00 0.00 3.41
123 124 5.418676 CCAGTTCCAACAAAAACATGACTT 58.581 37.500 0.00 0.00 0.00 3.01
124 125 5.291614 CCAGTTCCAACAAAAACATGACTTG 59.708 40.000 0.00 2.15 0.00 3.16
125 126 4.869861 AGTTCCAACAAAAACATGACTTGC 59.130 37.500 0.00 0.00 0.00 4.01
126 127 3.791245 TCCAACAAAAACATGACTTGCC 58.209 40.909 0.00 0.00 0.00 4.52
127 128 2.539274 CCAACAAAAACATGACTTGCCG 59.461 45.455 0.00 0.00 0.00 5.69
128 129 1.851658 ACAAAAACATGACTTGCCGC 58.148 45.000 0.00 0.00 0.00 6.53
129 130 1.139163 CAAAAACATGACTTGCCGCC 58.861 50.000 0.00 0.00 0.00 6.13
130 131 1.039856 AAAAACATGACTTGCCGCCT 58.960 45.000 0.00 0.00 0.00 5.52
131 132 1.039856 AAAACATGACTTGCCGCCTT 58.960 45.000 0.00 0.00 0.00 4.35
132 133 1.039856 AAACATGACTTGCCGCCTTT 58.960 45.000 0.00 0.00 0.00 3.11
133 134 0.314935 AACATGACTTGCCGCCTTTG 59.685 50.000 0.00 0.00 0.00 2.77
134 135 1.213537 CATGACTTGCCGCCTTTGG 59.786 57.895 0.00 0.00 0.00 3.28
135 136 1.978617 ATGACTTGCCGCCTTTGGG 60.979 57.895 0.00 0.00 0.00 4.12
136 137 2.597510 GACTTGCCGCCTTTGGGT 60.598 61.111 0.00 0.00 34.45 4.51
137 138 2.597510 ACTTGCCGCCTTTGGGTC 60.598 61.111 0.00 0.00 34.45 4.46
138 139 3.737172 CTTGCCGCCTTTGGGTCG 61.737 66.667 0.00 0.00 34.45 4.79
142 143 4.038080 CCGCCTTTGGGTCGCAAC 62.038 66.667 1.10 0.00 33.23 4.17
143 144 3.283684 CGCCTTTGGGTCGCAACA 61.284 61.111 1.10 0.00 34.45 3.33
144 145 2.840066 CGCCTTTGGGTCGCAACAA 61.840 57.895 1.10 0.00 34.45 2.83
145 146 1.439644 GCCTTTGGGTCGCAACAAA 59.560 52.632 1.10 0.00 35.49 2.83
146 147 0.179097 GCCTTTGGGTCGCAACAAAA 60.179 50.000 1.10 0.00 36.29 2.44
147 148 1.740718 GCCTTTGGGTCGCAACAAAAA 60.741 47.619 1.10 0.00 36.29 1.94
148 149 2.832563 CCTTTGGGTCGCAACAAAAAT 58.167 42.857 1.10 0.00 36.29 1.82
149 150 2.543430 CCTTTGGGTCGCAACAAAAATG 59.457 45.455 1.10 0.00 36.29 2.32
150 151 1.576356 TTGGGTCGCAACAAAAATGC 58.424 45.000 0.00 0.00 40.41 3.56
151 152 0.749649 TGGGTCGCAACAAAAATGCT 59.250 45.000 0.00 0.00 41.64 3.79
152 153 1.137872 TGGGTCGCAACAAAAATGCTT 59.862 42.857 0.00 0.00 41.64 3.91
153 154 2.362397 TGGGTCGCAACAAAAATGCTTA 59.638 40.909 0.00 0.00 41.64 3.09
154 155 2.729360 GGGTCGCAACAAAAATGCTTAC 59.271 45.455 0.00 0.00 41.64 2.34
155 156 3.376540 GGTCGCAACAAAAATGCTTACA 58.623 40.909 0.00 0.00 41.64 2.41
156 157 3.181575 GGTCGCAACAAAAATGCTTACAC 59.818 43.478 0.00 0.00 41.64 2.90
157 158 3.039405 TCGCAACAAAAATGCTTACACG 58.961 40.909 0.00 0.00 41.64 4.49
158 159 3.039405 CGCAACAAAAATGCTTACACGA 58.961 40.909 0.00 0.00 41.64 4.35
159 160 3.668191 CGCAACAAAAATGCTTACACGAT 59.332 39.130 0.00 0.00 41.64 3.73
160 161 4.201391 CGCAACAAAAATGCTTACACGATC 60.201 41.667 0.00 0.00 41.64 3.69
161 162 4.089923 GCAACAAAAATGCTTACACGATCC 59.910 41.667 0.00 0.00 40.64 3.36
162 163 4.434713 ACAAAAATGCTTACACGATCCC 57.565 40.909 0.00 0.00 0.00 3.85
163 164 3.823873 ACAAAAATGCTTACACGATCCCA 59.176 39.130 0.00 0.00 0.00 4.37
164 165 4.082787 ACAAAAATGCTTACACGATCCCAG 60.083 41.667 0.00 0.00 0.00 4.45
165 166 1.668419 AATGCTTACACGATCCCAGC 58.332 50.000 0.00 0.00 0.00 4.85
166 167 0.541392 ATGCTTACACGATCCCAGCA 59.459 50.000 0.00 0.00 44.32 4.41
167 168 0.323302 TGCTTACACGATCCCAGCAA 59.677 50.000 0.00 0.00 37.54 3.91
168 169 1.271108 TGCTTACACGATCCCAGCAAA 60.271 47.619 0.00 0.00 37.54 3.68
169 170 1.810151 GCTTACACGATCCCAGCAAAA 59.190 47.619 0.00 0.00 0.00 2.44
170 171 2.227865 GCTTACACGATCCCAGCAAAAA 59.772 45.455 0.00 0.00 0.00 1.94
203 204 3.996614 AAAAATGCCTCGTCCCCG 58.003 55.556 0.00 0.00 0.00 5.73
204 205 2.340328 AAAAATGCCTCGTCCCCGC 61.340 57.895 0.00 0.00 0.00 6.13
205 206 4.796495 AAATGCCTCGTCCCCGCC 62.796 66.667 0.00 0.00 0.00 6.13
224 225 4.681978 GTCGCAGCCGTTGGTCCT 62.682 66.667 0.00 0.00 35.54 3.85
225 226 2.992689 TCGCAGCCGTTGGTCCTA 60.993 61.111 0.00 0.00 35.54 2.94
226 227 2.509336 CGCAGCCGTTGGTCCTAG 60.509 66.667 0.00 0.00 0.00 3.02
227 228 2.663196 GCAGCCGTTGGTCCTAGT 59.337 61.111 0.00 0.00 0.00 2.57
228 229 1.895238 GCAGCCGTTGGTCCTAGTA 59.105 57.895 0.00 0.00 0.00 1.82
229 230 0.248289 GCAGCCGTTGGTCCTAGTAA 59.752 55.000 0.00 0.00 0.00 2.24
230 231 1.338389 GCAGCCGTTGGTCCTAGTAAA 60.338 52.381 0.00 0.00 0.00 2.01
231 232 2.872842 GCAGCCGTTGGTCCTAGTAAAA 60.873 50.000 0.00 0.00 0.00 1.52
232 233 3.606687 CAGCCGTTGGTCCTAGTAAAAT 58.393 45.455 0.00 0.00 0.00 1.82
233 234 4.761975 CAGCCGTTGGTCCTAGTAAAATA 58.238 43.478 0.00 0.00 0.00 1.40
234 235 5.180271 CAGCCGTTGGTCCTAGTAAAATAA 58.820 41.667 0.00 0.00 0.00 1.40
235 236 5.064325 CAGCCGTTGGTCCTAGTAAAATAAC 59.936 44.000 0.00 0.00 0.00 1.89
236 237 5.046087 AGCCGTTGGTCCTAGTAAAATAACT 60.046 40.000 0.00 0.00 0.00 2.24
237 238 6.155049 AGCCGTTGGTCCTAGTAAAATAACTA 59.845 38.462 0.00 0.00 0.00 2.24
238 239 6.478016 GCCGTTGGTCCTAGTAAAATAACTAG 59.522 42.308 4.41 4.41 45.71 2.57
239 240 6.478016 CCGTTGGTCCTAGTAAAATAACTAGC 59.522 42.308 5.67 0.00 45.08 3.42
240 241 7.263496 CGTTGGTCCTAGTAAAATAACTAGCT 58.737 38.462 5.67 0.00 45.08 3.32
241 242 8.408601 CGTTGGTCCTAGTAAAATAACTAGCTA 58.591 37.037 5.67 0.00 45.08 3.32
242 243 9.747293 GTTGGTCCTAGTAAAATAACTAGCTAG 57.253 37.037 19.44 19.44 45.08 3.42
243 244 9.484806 TTGGTCCTAGTAAAATAACTAGCTAGT 57.515 33.333 20.95 20.95 45.08 2.57
244 245 9.484806 TGGTCCTAGTAAAATAACTAGCTAGTT 57.515 33.333 34.85 34.85 45.08 2.24
245 246 9.747293 GGTCCTAGTAAAATAACTAGCTAGTTG 57.253 37.037 37.89 22.56 45.08 3.16
270 271 4.937696 CACAATATCGTGCTGGTTACAA 57.062 40.909 0.00 0.00 0.00 2.41
271 272 4.647964 CACAATATCGTGCTGGTTACAAC 58.352 43.478 0.00 0.00 0.00 3.32
272 273 4.153296 CACAATATCGTGCTGGTTACAACA 59.847 41.667 0.00 0.00 0.00 3.33
273 274 4.153475 ACAATATCGTGCTGGTTACAACAC 59.847 41.667 0.00 0.00 39.66 3.32
277 278 0.231279 GTGCTGGTTACAACACGTCG 59.769 55.000 0.00 0.00 34.40 5.12
278 279 0.102663 TGCTGGTTACAACACGTCGA 59.897 50.000 0.00 0.00 0.00 4.20
279 280 0.505655 GCTGGTTACAACACGTCGAC 59.494 55.000 5.18 5.18 0.00 4.20
280 281 1.866880 GCTGGTTACAACACGTCGACT 60.867 52.381 14.70 0.00 0.00 4.18
281 282 2.049228 CTGGTTACAACACGTCGACTC 58.951 52.381 14.70 0.00 0.00 3.36
282 283 1.047739 GGTTACAACACGTCGACTCG 58.952 55.000 14.70 6.77 0.00 4.18
283 284 0.428618 GTTACAACACGTCGACTCGC 59.571 55.000 14.70 0.00 0.00 5.03
284 285 0.661187 TTACAACACGTCGACTCGCC 60.661 55.000 14.70 0.00 0.00 5.54
285 286 2.769000 TACAACACGTCGACTCGCCG 62.769 60.000 14.70 0.00 33.55 6.46
286 287 3.957535 AACACGTCGACTCGCCGT 61.958 61.111 14.70 0.94 43.36 5.68
287 288 3.868951 AACACGTCGACTCGCCGTC 62.869 63.158 14.70 0.00 39.95 4.79
294 295 2.476051 GACTCGCCGTCGTACGAA 59.524 61.111 21.39 2.58 46.05 3.85
295 296 1.154413 GACTCGCCGTCGTACGAAA 60.154 57.895 21.39 0.00 46.05 3.46
296 297 0.725784 GACTCGCCGTCGTACGAAAA 60.726 55.000 21.39 2.97 46.05 2.29
297 298 0.317770 ACTCGCCGTCGTACGAAAAA 60.318 50.000 21.39 3.34 46.05 1.94
298 299 0.090178 CTCGCCGTCGTACGAAAAAC 59.910 55.000 21.39 7.17 46.05 2.43
299 300 0.593518 TCGCCGTCGTACGAAAAACA 60.594 50.000 21.39 1.19 46.05 2.83
300 301 0.229247 CGCCGTCGTACGAAAAACAA 59.771 50.000 21.39 0.00 46.05 2.83
301 302 1.651099 GCCGTCGTACGAAAAACAAC 58.349 50.000 21.39 5.18 46.05 3.32
302 303 1.005137 GCCGTCGTACGAAAAACAACA 60.005 47.619 21.39 0.00 46.05 3.33
303 304 2.617366 CCGTCGTACGAAAAACAACAC 58.383 47.619 21.39 3.61 46.05 3.32
304 305 2.597272 CCGTCGTACGAAAAACAACACC 60.597 50.000 21.39 2.19 46.05 4.16
305 306 2.282290 CGTCGTACGAAAAACAACACCT 59.718 45.455 21.39 0.00 46.05 4.00
306 307 3.600011 CGTCGTACGAAAAACAACACCTC 60.600 47.826 21.39 1.42 46.05 3.85
307 308 2.535166 TCGTACGAAAAACAACACCTCG 59.465 45.455 17.11 0.00 35.68 4.63
308 309 2.535166 CGTACGAAAAACAACACCTCGA 59.465 45.455 10.44 0.00 33.81 4.04
309 310 3.600011 CGTACGAAAAACAACACCTCGAC 60.600 47.826 10.44 0.00 33.81 4.20
310 311 2.624636 ACGAAAAACAACACCTCGACT 58.375 42.857 0.00 0.00 33.81 4.18
311 312 2.606272 ACGAAAAACAACACCTCGACTC 59.394 45.455 0.00 0.00 33.81 3.36
312 313 2.347292 CGAAAAACAACACCTCGACTCG 60.347 50.000 0.00 0.00 0.00 4.18
313 314 0.935196 AAAACAACACCTCGACTCGC 59.065 50.000 0.00 0.00 0.00 5.03
314 315 0.878961 AAACAACACCTCGACTCGCC 60.879 55.000 0.00 0.00 0.00 5.54
315 316 2.805353 CAACACCTCGACTCGCCG 60.805 66.667 0.00 0.00 0.00 6.46
316 317 4.719369 AACACCTCGACTCGCCGC 62.719 66.667 0.00 0.00 0.00 6.53
342 343 3.747976 GCACCGGTGGTTGCCATC 61.748 66.667 34.58 12.61 35.28 3.51
343 344 3.061848 CACCGGTGGTTGCCATCC 61.062 66.667 27.57 0.00 35.28 3.51
344 345 3.575247 ACCGGTGGTTGCCATCCA 61.575 61.111 6.12 0.00 35.28 3.41
345 346 2.751436 CCGGTGGTTGCCATCCAG 60.751 66.667 0.00 0.00 35.28 3.86
346 347 3.443045 CGGTGGTTGCCATCCAGC 61.443 66.667 12.89 12.89 46.17 4.85
347 348 2.036256 GGTGGTTGCCATCCAGCT 59.964 61.111 15.12 0.00 46.15 4.24
348 349 2.048603 GGTGGTTGCCATCCAGCTC 61.049 63.158 15.12 0.00 46.15 4.09
349 350 2.046023 TGGTTGCCATCCAGCTCG 60.046 61.111 0.00 0.00 0.00 5.03
350 351 2.045926 GGTTGCCATCCAGCTCGT 60.046 61.111 0.00 0.00 0.00 4.18
351 352 2.401766 GGTTGCCATCCAGCTCGTG 61.402 63.158 0.00 0.00 0.00 4.35
352 353 2.747460 TTGCCATCCAGCTCGTGC 60.747 61.111 0.07 0.07 40.05 5.34
360 361 4.827087 CAGCTCGTGCGGGATGCT 62.827 66.667 3.48 0.00 46.63 3.79
361 362 3.147595 AGCTCGTGCGGGATGCTA 61.148 61.111 3.48 0.00 46.63 3.49
362 363 2.659897 GCTCGTGCGGGATGCTAG 60.660 66.667 0.00 0.00 46.63 3.42
363 364 2.808315 CTCGTGCGGGATGCTAGT 59.192 61.111 0.00 0.00 46.63 2.57
364 365 1.141881 CTCGTGCGGGATGCTAGTT 59.858 57.895 0.00 0.00 46.63 2.24
365 366 1.148157 CTCGTGCGGGATGCTAGTTG 61.148 60.000 0.00 0.00 46.63 3.16
366 367 2.813179 CGTGCGGGATGCTAGTTGC 61.813 63.158 0.00 0.00 46.63 4.17
375 376 2.358737 GCTAGTTGCAGCACCCGT 60.359 61.111 2.55 0.00 41.40 5.28
376 377 2.391389 GCTAGTTGCAGCACCCGTC 61.391 63.158 2.55 0.00 41.40 4.79
377 378 2.048597 TAGTTGCAGCACCCGTCG 60.049 61.111 2.55 0.00 0.00 5.12
378 379 2.765250 CTAGTTGCAGCACCCGTCGT 62.765 60.000 2.55 0.00 0.00 4.34
379 380 2.758770 TAGTTGCAGCACCCGTCGTC 62.759 60.000 2.55 0.00 0.00 4.20
382 383 4.796231 GCAGCACCCGTCGTCGAT 62.796 66.667 2.98 0.00 39.71 3.59
383 384 2.880879 CAGCACCCGTCGTCGATG 60.881 66.667 7.51 7.51 39.71 3.84
384 385 4.796231 AGCACCCGTCGTCGATGC 62.796 66.667 18.22 18.22 39.71 3.91
386 387 3.179265 CACCCGTCGTCGATGCAC 61.179 66.667 9.02 0.00 39.71 4.57
387 388 4.430765 ACCCGTCGTCGATGCACC 62.431 66.667 9.02 0.00 39.71 5.01
388 389 4.129737 CCCGTCGTCGATGCACCT 62.130 66.667 9.02 0.00 39.71 4.00
389 390 2.880879 CCGTCGTCGATGCACCTG 60.881 66.667 9.02 0.00 39.71 4.00
390 391 2.880879 CGTCGTCGATGCACCTGG 60.881 66.667 0.67 0.00 39.71 4.45
391 392 2.261671 GTCGTCGATGCACCTGGT 59.738 61.111 0.00 0.00 0.00 4.00
392 393 1.374252 GTCGTCGATGCACCTGGTT 60.374 57.895 0.00 0.00 0.00 3.67
393 394 1.374125 TCGTCGATGCACCTGGTTG 60.374 57.895 0.00 0.00 0.00 3.77
394 395 1.667830 CGTCGATGCACCTGGTTGT 60.668 57.895 0.00 0.00 0.00 3.32
395 396 1.868997 GTCGATGCACCTGGTTGTG 59.131 57.895 0.00 0.00 39.29 3.33
401 402 3.685435 CACCTGGTTGTGCATCCC 58.315 61.111 0.00 0.00 0.00 3.85
402 403 2.034066 ACCTGGTTGTGCATCCCG 59.966 61.111 0.00 0.00 0.00 5.14
403 404 3.443045 CCTGGTTGTGCATCCCGC 61.443 66.667 0.00 0.00 42.89 6.13
404 405 2.360350 CTGGTTGTGCATCCCGCT 60.360 61.111 0.00 0.00 43.06 5.52
405 406 2.672651 TGGTTGTGCATCCCGCTG 60.673 61.111 0.00 0.00 43.06 5.18
406 407 2.359850 GGTTGTGCATCCCGCTGA 60.360 61.111 0.00 0.00 43.06 4.26
407 408 1.971167 GGTTGTGCATCCCGCTGAA 60.971 57.895 0.00 0.00 43.06 3.02
408 409 1.523154 GGTTGTGCATCCCGCTGAAA 61.523 55.000 0.00 0.00 43.06 2.69
409 410 0.527565 GTTGTGCATCCCGCTGAAAT 59.472 50.000 0.00 0.00 43.06 2.17
410 411 0.810648 TTGTGCATCCCGCTGAAATC 59.189 50.000 0.00 0.00 43.06 2.17
411 412 1.353103 GTGCATCCCGCTGAAATCG 59.647 57.895 0.00 0.00 43.06 3.34
412 413 1.078497 TGCATCCCGCTGAAATCGT 60.078 52.632 0.00 0.00 43.06 3.73
413 414 0.676466 TGCATCCCGCTGAAATCGTT 60.676 50.000 0.00 0.00 43.06 3.85
414 415 0.248215 GCATCCCGCTGAAATCGTTG 60.248 55.000 0.00 0.00 37.77 4.10
415 416 1.086696 CATCCCGCTGAAATCGTTGT 58.913 50.000 0.00 0.00 0.00 3.32
416 417 1.062587 CATCCCGCTGAAATCGTTGTC 59.937 52.381 0.00 0.00 0.00 3.18
417 418 1.011968 TCCCGCTGAAATCGTTGTCG 61.012 55.000 0.00 0.00 38.55 4.35
418 419 1.225745 CCGCTGAAATCGTTGTCGC 60.226 57.895 0.00 0.00 36.96 5.19
419 420 1.491127 CGCTGAAATCGTTGTCGCA 59.509 52.632 0.00 0.00 36.96 5.10
420 421 0.110867 CGCTGAAATCGTTGTCGCAA 60.111 50.000 0.00 0.00 36.96 4.85
421 422 1.658931 CGCTGAAATCGTTGTCGCAAA 60.659 47.619 0.00 0.00 36.96 3.68
422 423 2.380660 GCTGAAATCGTTGTCGCAAAA 58.619 42.857 0.00 0.00 36.96 2.44
423 424 2.979813 GCTGAAATCGTTGTCGCAAAAT 59.020 40.909 0.00 0.00 36.96 1.82
424 425 3.058129 GCTGAAATCGTTGTCGCAAAATC 59.942 43.478 0.00 0.00 36.96 2.17
425 426 3.222361 TGAAATCGTTGTCGCAAAATCG 58.778 40.909 0.00 0.00 36.96 3.34
426 427 1.602191 AATCGTTGTCGCAAAATCGC 58.398 45.000 0.00 0.00 36.96 4.58
434 435 2.554272 GCAAAATCGCGTGGTCGT 59.446 55.556 5.77 0.00 39.49 4.34
436 437 1.154488 CAAAATCGCGTGGTCGTGG 60.154 57.895 5.77 0.00 45.94 4.94
437 438 1.301087 AAAATCGCGTGGTCGTGGA 60.301 52.632 5.77 0.00 45.94 4.02
438 439 1.562575 AAAATCGCGTGGTCGTGGAC 61.563 55.000 5.77 0.00 45.94 4.02
439 440 2.702751 AAATCGCGTGGTCGTGGACA 62.703 55.000 5.77 0.00 45.94 4.02
440 441 3.909258 ATCGCGTGGTCGTGGACAC 62.909 63.158 5.77 0.00 45.94 3.67
441 442 4.934942 CGCGTGGTCGTGGACACA 62.935 66.667 0.00 0.00 42.82 3.72
442 443 2.357034 GCGTGGTCGTGGACACAT 60.357 61.111 3.12 0.00 39.49 3.21
443 444 1.959226 GCGTGGTCGTGGACACATT 60.959 57.895 3.12 0.00 39.49 2.71
444 445 1.859398 CGTGGTCGTGGACACATTG 59.141 57.895 3.12 0.00 33.68 2.82
445 446 0.598942 CGTGGTCGTGGACACATTGA 60.599 55.000 3.12 0.00 33.68 2.57
446 447 1.148310 GTGGTCGTGGACACATTGAG 58.852 55.000 3.12 0.00 33.68 3.02
447 448 0.602638 TGGTCGTGGACACATTGAGC 60.603 55.000 3.12 2.75 33.68 4.26
448 449 1.626654 GGTCGTGGACACATTGAGCG 61.627 60.000 3.12 0.00 33.68 5.03
449 450 2.027073 TCGTGGACACATTGAGCGC 61.027 57.895 0.00 0.00 0.00 5.92
450 451 2.870372 GTGGACACATTGAGCGCC 59.130 61.111 2.29 0.00 0.00 6.53
451 452 2.741985 TGGACACATTGAGCGCCG 60.742 61.111 2.29 0.00 0.00 6.46
452 453 4.166011 GGACACATTGAGCGCCGC 62.166 66.667 2.29 0.00 0.00 6.53
453 454 3.121030 GACACATTGAGCGCCGCT 61.121 61.111 13.40 13.40 43.88 5.52
515 517 3.095898 GATGGCGTTGTAGCGGTGC 62.096 63.158 0.00 0.00 38.18 5.01
539 541 1.374947 GGGTGTGCAGACTAGGCAA 59.625 57.895 14.32 0.00 43.91 4.52
561 571 0.389166 GCCAGTGACGAACAGGAGAG 60.389 60.000 8.24 0.00 37.65 3.20
567 577 2.750166 GTGACGAACAGGAGAGATCTGA 59.250 50.000 0.00 0.00 36.22 3.27
568 578 3.191581 GTGACGAACAGGAGAGATCTGAA 59.808 47.826 0.00 0.00 36.22 3.02
579 589 4.714308 GGAGAGATCTGAAAAAGAGAGGGA 59.286 45.833 0.00 0.00 38.67 4.20
583 593 4.849235 AGATCTGAAAAAGAGAGGGAAGGT 59.151 41.667 0.00 0.00 38.67 3.50
633 643 3.849951 GCGCGGAGAGGATGGGAA 61.850 66.667 8.83 0.00 0.00 3.97
643 653 5.264395 GGAGAGGATGGGAAAAATGAAAGA 58.736 41.667 0.00 0.00 0.00 2.52
652 662 7.707774 TGGGAAAAATGAAAGAAAAACGATC 57.292 32.000 0.00 0.00 0.00 3.69
654 664 6.639279 GGGAAAAATGAAAGAAAAACGATCGA 59.361 34.615 24.34 0.00 0.00 3.59
665 675 0.578683 AACGATCGAATGATGCTGCG 59.421 50.000 24.34 0.00 34.09 5.18
669 679 0.516001 ATCGAATGATGCTGCGATGC 59.484 50.000 0.00 0.00 41.38 3.91
670 680 0.531311 TCGAATGATGCTGCGATGCT 60.531 50.000 0.00 0.00 0.00 3.79
746 756 1.944676 GGCGCGATAGGAGACGTTG 60.945 63.158 12.10 0.00 0.00 4.10
830 848 6.225981 ACATTTCCCTAAATCATGCCTTTC 57.774 37.500 0.00 0.00 32.87 2.62
851 877 2.410262 CGTGTCGCAGTCTGATTTCAAC 60.410 50.000 3.32 0.00 0.00 3.18
959 985 1.815421 CTGCCAAAGATCCGACCCG 60.815 63.158 0.00 0.00 0.00 5.28
989 1015 0.825840 GCACAGCCAAACCCTAACCA 60.826 55.000 0.00 0.00 0.00 3.67
1050 1076 0.823769 GATCCGCCCCCAAATTCCTC 60.824 60.000 0.00 0.00 0.00 3.71
1059 1085 1.271926 CCCAAATTCCTCTCCCGTGTT 60.272 52.381 0.00 0.00 0.00 3.32
1060 1086 1.812571 CCAAATTCCTCTCCCGTGTTG 59.187 52.381 0.00 0.00 0.00 3.33
1265 1821 4.338400 GGGTCCAGGTGATTATTTAGTTGC 59.662 45.833 0.00 0.00 0.00 4.17
1298 1856 0.036306 CTTGGCGTTGTAGGGAAGGT 59.964 55.000 0.00 0.00 0.00 3.50
1309 1867 4.476297 TGTAGGGAAGGTCGATAGCAATA 58.524 43.478 0.00 0.00 0.00 1.90
1373 1933 1.804748 GCCGGTGCTATATAACCAAGC 59.195 52.381 1.90 3.17 36.14 4.01
1471 2031 2.553079 TGTTGCTGTTTGAAACGGAC 57.447 45.000 20.29 10.79 40.26 4.79
1525 2091 9.793259 AACAAATACTCCTTGTTAAAGAGATCA 57.207 29.630 0.00 0.00 43.44 2.92
1548 2114 7.053498 TCATAAGCAAGATGGCAAACTGTATA 58.947 34.615 0.00 0.00 35.83 1.47
1549 2115 7.555914 TCATAAGCAAGATGGCAAACTGTATAA 59.444 33.333 0.00 0.00 35.83 0.98
1613 2179 3.828875 AGGCTTATTACCTGCAGACTC 57.171 47.619 17.39 0.00 35.72 3.36
1855 2425 2.483188 GGATGGAGTAGGCCTGTAAACG 60.483 54.545 17.99 0.00 0.00 3.60
2001 2572 4.780815 TCACCACTGCTTATTAATCCTGG 58.219 43.478 0.00 0.00 0.00 4.45
2006 2577 5.829924 CCACTGCTTATTAATCCTGGTGAAT 59.170 40.000 0.00 0.00 0.00 2.57
2086 2660 2.037641 TCCTATCCATCATGTTCTGGCG 59.962 50.000 6.79 0.00 32.30 5.69
2134 2709 4.647424 TGTTGCTCCGAAAAAGAAATGT 57.353 36.364 0.00 0.00 0.00 2.71
2147 2722 9.848172 CGAAAAAGAAATGTACCAATTTTCTTG 57.152 29.630 16.80 7.07 44.63 3.02
2149 2724 7.728847 AAAGAAATGTACCAATTTTCTTGGC 57.271 32.000 16.80 0.00 44.63 4.52
2178 2754 8.706492 ATGTTTGGTGCATCACTTATATTTTG 57.294 30.769 0.00 0.00 34.40 2.44
2435 3219 3.320673 CAGAAGTTACTGGTCCAGTCC 57.679 52.381 28.07 18.84 41.21 3.85
2894 3682 3.287222 TCCTACAAAGCAAAAGCAGTGT 58.713 40.909 0.00 0.00 0.00 3.55
3045 3833 7.701539 ATCCAAGTGTTTTATGCATAGTTCA 57.298 32.000 6.50 4.84 0.00 3.18
3046 3834 7.517614 TCCAAGTGTTTTATGCATAGTTCAA 57.482 32.000 6.50 0.00 0.00 2.69
3047 3835 7.946207 TCCAAGTGTTTTATGCATAGTTCAAA 58.054 30.769 6.50 1.98 0.00 2.69
3048 3836 8.417106 TCCAAGTGTTTTATGCATAGTTCAAAA 58.583 29.630 6.50 3.47 0.00 2.44
3049 3837 9.039870 CCAAGTGTTTTATGCATAGTTCAAAAA 57.960 29.630 6.50 2.74 0.00 1.94
3071 3859 3.509266 GCTAGGCGTTAATTGTGCG 57.491 52.632 0.00 0.00 0.00 5.34
3072 3860 0.725117 GCTAGGCGTTAATTGTGCGT 59.275 50.000 0.00 0.00 0.00 5.24
3073 3861 1.129811 GCTAGGCGTTAATTGTGCGTT 59.870 47.619 0.00 0.00 0.00 4.84
3074 3862 2.413634 GCTAGGCGTTAATTGTGCGTTT 60.414 45.455 0.00 0.00 0.00 3.60
3075 3863 2.785713 AGGCGTTAATTGTGCGTTTT 57.214 40.000 0.00 0.00 0.00 2.43
3076 3864 2.389998 AGGCGTTAATTGTGCGTTTTG 58.610 42.857 0.00 0.00 0.00 2.44
3077 3865 1.136748 GGCGTTAATTGTGCGTTTTGC 60.137 47.619 0.00 0.00 46.70 3.68
3078 3866 1.136748 GCGTTAATTGTGCGTTTTGCC 60.137 47.619 0.00 0.00 45.60 4.52
3079 3867 2.120232 CGTTAATTGTGCGTTTTGCCA 58.880 42.857 0.00 0.00 45.60 4.92
3080 3868 2.097637 CGTTAATTGTGCGTTTTGCCAC 60.098 45.455 0.00 0.00 45.60 5.01
3081 3869 2.141535 TAATTGTGCGTTTTGCCACC 57.858 45.000 0.00 0.00 45.60 4.61
3082 3870 0.873743 AATTGTGCGTTTTGCCACCG 60.874 50.000 0.00 0.00 45.60 4.94
3083 3871 4.560856 TGTGCGTTTTGCCACCGC 62.561 61.111 0.00 0.00 45.60 5.68
3086 3874 4.279043 GCGTTTTGCCACCGCCTT 62.279 61.111 0.00 0.00 41.50 4.35
3087 3875 2.354539 CGTTTTGCCACCGCCTTG 60.355 61.111 0.00 0.00 0.00 3.61
3088 3876 2.661537 GTTTTGCCACCGCCTTGC 60.662 61.111 0.00 0.00 0.00 4.01
3100 3888 1.502190 GCCTTGCGCTTTACTGACC 59.498 57.895 9.73 0.00 0.00 4.02
3101 3889 1.234615 GCCTTGCGCTTTACTGACCA 61.235 55.000 9.73 0.00 0.00 4.02
3102 3890 1.234821 CCTTGCGCTTTACTGACCAA 58.765 50.000 9.73 0.00 0.00 3.67
3103 3891 1.606668 CCTTGCGCTTTACTGACCAAA 59.393 47.619 9.73 0.00 0.00 3.28
3104 3892 2.350772 CCTTGCGCTTTACTGACCAAAG 60.351 50.000 9.73 0.00 36.32 2.77
3107 3895 3.384702 GCTTTACTGACCAAAGCGC 57.615 52.632 0.00 0.00 45.88 5.92
3108 3896 0.591170 GCTTTACTGACCAAAGCGCA 59.409 50.000 11.47 0.00 45.88 6.09
3109 3897 1.200020 GCTTTACTGACCAAAGCGCAT 59.800 47.619 11.47 0.00 45.88 4.73
3110 3898 2.855180 CTTTACTGACCAAAGCGCATG 58.145 47.619 11.47 8.38 0.00 4.06
3111 3899 0.521291 TTACTGACCAAAGCGCATGC 59.479 50.000 11.47 7.91 43.24 4.06
3125 3913 2.693797 GCATGCTTATGCGCAGTTAT 57.306 45.000 18.32 0.10 44.10 1.89
3126 3914 2.313234 GCATGCTTATGCGCAGTTATG 58.687 47.619 18.32 15.92 44.10 1.90
3140 3928 4.864916 CAGTTATGCACAGATTAAGCGT 57.135 40.909 0.00 0.00 0.00 5.07
3141 3929 5.966636 CAGTTATGCACAGATTAAGCGTA 57.033 39.130 0.00 0.00 0.00 4.42
3142 3930 5.967469 CAGTTATGCACAGATTAAGCGTAG 58.033 41.667 0.00 0.00 32.03 3.51
3143 3931 5.520288 CAGTTATGCACAGATTAAGCGTAGT 59.480 40.000 0.00 0.00 32.03 2.73
3144 3932 6.036083 CAGTTATGCACAGATTAAGCGTAGTT 59.964 38.462 0.00 0.00 32.03 2.24
3145 3933 7.222031 CAGTTATGCACAGATTAAGCGTAGTTA 59.778 37.037 0.00 0.00 32.03 2.24
3146 3934 7.926555 AGTTATGCACAGATTAAGCGTAGTTAT 59.073 33.333 0.00 0.00 32.03 1.89
3147 3935 5.966636 TGCACAGATTAAGCGTAGTTATG 57.033 39.130 0.00 0.00 0.00 1.90
3148 3936 4.270084 TGCACAGATTAAGCGTAGTTATGC 59.730 41.667 0.00 0.00 38.47 3.14
3149 3937 4.606232 GCACAGATTAAGCGTAGTTATGCG 60.606 45.833 0.00 0.00 42.84 4.73
3167 3955 1.201332 GCAATGCGTTTTGCCAACG 59.799 52.632 12.66 12.66 44.94 4.10
3172 3960 4.838959 CGTTTTGCCAACGCCTAG 57.161 55.556 5.44 0.00 36.82 3.02
3173 3961 2.240230 CGTTTTGCCAACGCCTAGA 58.760 52.632 5.44 0.00 36.82 2.43
3174 3962 0.165944 CGTTTTGCCAACGCCTAGAG 59.834 55.000 5.44 0.00 36.82 2.43
3175 3963 0.109735 GTTTTGCCAACGCCTAGAGC 60.110 55.000 0.00 0.00 38.52 4.09
3176 3964 1.241315 TTTTGCCAACGCCTAGAGCC 61.241 55.000 0.00 0.00 38.78 4.70
3177 3965 2.124507 TTTGCCAACGCCTAGAGCCT 62.125 55.000 0.00 0.00 38.78 4.58
3178 3966 1.261938 TTGCCAACGCCTAGAGCCTA 61.262 55.000 0.00 0.00 38.78 3.93
3179 3967 1.068250 GCCAACGCCTAGAGCCTAG 59.932 63.158 0.00 3.06 38.78 3.02
3180 3968 1.742768 CCAACGCCTAGAGCCTAGG 59.257 63.158 18.85 18.85 38.78 3.02
3185 3973 4.350441 CCTAGAGCCTAGGCGCGC 62.350 72.222 28.76 25.94 45.41 6.86
3186 3974 3.291383 CTAGAGCCTAGGCGCGCT 61.291 66.667 32.29 25.96 45.41 5.92
3187 3975 2.833582 TAGAGCCTAGGCGCGCTT 60.834 61.111 32.29 27.46 45.41 4.68
3188 3976 1.516365 CTAGAGCCTAGGCGCGCTTA 61.516 60.000 32.29 27.04 45.41 3.09
3189 3977 1.105167 TAGAGCCTAGGCGCGCTTAA 61.105 55.000 32.29 15.41 45.41 1.85
3190 3978 2.356818 AGAGCCTAGGCGCGCTTAAG 62.357 60.000 32.29 22.56 45.41 1.85
3191 3979 3.640992 GCCTAGGCGCGCTTAAGC 61.641 66.667 32.29 28.27 37.78 3.09
3271 4059 5.738909 AGAAGTATTTGAGTCCTGGTGATG 58.261 41.667 0.00 0.00 0.00 3.07
3295 4083 7.205297 TGGTAGATATTTAGCACTTCGTAACC 58.795 38.462 1.27 0.00 0.00 2.85
3316 4104 5.445964 ACCGCTAATCAGGTTATTGGAAAT 58.554 37.500 0.00 0.00 37.49 2.17
3333 4121 8.958119 ATTGGAAATTAGCATACGTCTAGAAA 57.042 30.769 0.00 0.00 0.00 2.52
3435 4223 5.952947 CAGAAGGACTCTAGGAGGAACTTTA 59.047 44.000 0.00 0.00 32.11 1.85
3436 4224 6.096282 CAGAAGGACTCTAGGAGGAACTTTAG 59.904 46.154 0.00 0.00 32.11 1.85
3437 4225 4.874199 AGGACTCTAGGAGGAACTTTAGG 58.126 47.826 0.00 0.00 41.55 2.69
3444 4232 7.954620 ACTCTAGGAGGAACTTTAGGAGTTAAA 59.045 37.037 0.00 0.00 41.55 1.52
3497 4285 4.714632 TCCAGGAGGAACTTTTACAGTTG 58.285 43.478 0.00 0.00 46.53 3.16
3532 4320 7.551617 ACCCTTATGTAGTACATTACAGTTTGC 59.448 37.037 20.52 0.00 39.88 3.68
3549 4337 0.968405 TGCAACCTTTTCAGCATCCC 59.032 50.000 0.00 0.00 31.05 3.85
3674 4462 6.324819 ACTCACATTGAAATCCTTATTTGCG 58.675 36.000 0.00 0.00 35.41 4.85
3751 4539 5.950549 TGGACAAACCCAAAACTAAGTGTTA 59.049 36.000 0.00 0.00 36.38 2.41
3811 4599 6.488344 TGTTGCACTTGGTAATTAGAATGACA 59.512 34.615 0.00 0.00 0.00 3.58
3865 4653 8.570068 TTTGTAGTTACCTTCTTGTTCAACTT 57.430 30.769 0.00 0.00 0.00 2.66
3870 4658 8.570068 AGTTACCTTCTTGTTCAACTTGTTTA 57.430 30.769 0.00 0.00 0.00 2.01
3872 4660 6.827586 ACCTTCTTGTTCAACTTGTTTACA 57.172 33.333 0.00 0.00 0.00 2.41
4002 4791 3.243035 TGAGTGTTCCAAAAATCACTGCG 60.243 43.478 1.41 0.00 40.53 5.18
4296 5085 1.619827 GATGATCCAGAGCTCCAGAGG 59.380 57.143 10.93 7.93 0.00 3.69
4465 5254 3.228188 AGGACTTTGATCAAACCAGCA 57.772 42.857 22.92 3.42 0.00 4.41
4830 5629 5.896922 TGCCATGTAATTTCGTTTTTGTG 57.103 34.783 0.00 0.00 0.00 3.33
5028 5827 8.361139 AGGTACCGATTCTTCTTATAGACATTG 58.639 37.037 6.18 0.00 0.00 2.82
5103 5902 4.510167 AAGTGAATTACTCTGGATGGGG 57.490 45.455 0.00 0.00 39.18 4.96
5119 5918 3.837399 TGGGGGTACAAATTTAGGCTT 57.163 42.857 0.00 0.00 0.00 4.35
5120 5919 3.703921 TGGGGGTACAAATTTAGGCTTC 58.296 45.455 0.00 0.00 0.00 3.86
5121 5920 3.076182 TGGGGGTACAAATTTAGGCTTCA 59.924 43.478 0.00 0.00 0.00 3.02
5244 6044 9.787435 CAACAATGGGCTACTAAATATAGGTAA 57.213 33.333 0.00 0.00 33.15 2.85
5245 6045 9.788889 AACAATGGGCTACTAAATATAGGTAAC 57.211 33.333 0.00 0.00 33.15 2.50
5262 6062 2.642139 AACATGGATTTCTTGCTGCG 57.358 45.000 0.00 0.00 0.00 5.18
5290 6090 7.173390 ACTTGCTATTGTTTGTACCTTCTCTTC 59.827 37.037 0.00 0.00 0.00 2.87
5347 6147 5.836898 AGTAAGACCCATACAATCCGTGATA 59.163 40.000 0.00 0.00 0.00 2.15
5421 6224 1.455383 GCCCCTTACAATCATGCCCG 61.455 60.000 0.00 0.00 0.00 6.13
5480 6283 2.202756 GGTGCTCGCCTTAGGTCG 60.203 66.667 0.00 4.42 0.00 4.79
5482 6285 4.143333 TGCTCGCCTTAGGTCGCC 62.143 66.667 9.56 5.02 0.00 5.54
5551 6354 5.152097 GCTGCTCATGATTTGTATGTATGC 58.848 41.667 0.00 0.00 0.00 3.14
5578 6381 7.177216 TGTTCTAGTTTCCATGATTGCTTGAAT 59.823 33.333 0.00 0.00 0.00 2.57
5579 6382 7.092137 TCTAGTTTCCATGATTGCTTGAATG 57.908 36.000 0.00 0.00 0.00 2.67
5647 6450 3.560896 GGGTGAACACACGCTAAAACTTA 59.439 43.478 7.25 0.00 41.87 2.24
5718 7028 3.374058 GGGTGATTTACATTCAGACCACG 59.626 47.826 0.00 0.00 0.00 4.94
5727 7037 5.407407 ACATTCAGACCACGAAACTAGAT 57.593 39.130 0.00 0.00 0.00 1.98
5728 7038 5.171476 ACATTCAGACCACGAAACTAGATG 58.829 41.667 0.00 0.00 0.00 2.90
5729 7039 3.232213 TCAGACCACGAAACTAGATGC 57.768 47.619 0.00 0.00 0.00 3.91
5730 7040 2.560981 TCAGACCACGAAACTAGATGCA 59.439 45.455 0.00 0.00 0.00 3.96
5732 7042 2.563179 AGACCACGAAACTAGATGCACT 59.437 45.455 0.00 0.00 0.00 4.40
5733 7043 3.006967 AGACCACGAAACTAGATGCACTT 59.993 43.478 0.00 0.00 0.00 3.16
5734 7044 3.326747 ACCACGAAACTAGATGCACTTC 58.673 45.455 0.00 0.00 0.00 3.01
5735 7045 3.006967 ACCACGAAACTAGATGCACTTCT 59.993 43.478 0.00 0.00 0.00 2.85
5736 7046 3.614616 CCACGAAACTAGATGCACTTCTC 59.385 47.826 0.00 0.00 0.00 2.87
5738 7048 4.867047 CACGAAACTAGATGCACTTCTCAT 59.133 41.667 0.00 0.00 0.00 2.90
5741 7051 7.063426 CACGAAACTAGATGCACTTCTCATTTA 59.937 37.037 0.00 0.00 0.00 1.40
5742 7052 7.766278 ACGAAACTAGATGCACTTCTCATTTAT 59.234 33.333 0.00 0.00 0.00 1.40
5743 7053 9.249457 CGAAACTAGATGCACTTCTCATTTATA 57.751 33.333 0.00 0.00 0.00 0.98
5789 7154 1.920610 ATTATACTCCCTCCGTCCGG 58.079 55.000 0.00 0.00 0.00 5.14
5801 7166 1.135315 TCCGTCCGGAATTACTTGACG 60.135 52.381 17.86 17.86 46.05 4.35
5805 7170 2.856557 GTCCGGAATTACTTGACGCTAC 59.143 50.000 5.23 0.00 0.00 3.58
5863 7228 4.145365 TGGACGTCAAATAATTCCGGAT 57.855 40.909 18.91 0.00 0.00 4.18
5882 7247 8.495160 TCCGGATGGAGGTAGTATATTTTAAA 57.505 34.615 0.00 0.00 40.17 1.52
5899 7264 9.737844 ATATTTTAAAGCACAAAAATGTGGGAT 57.262 25.926 10.62 0.00 39.97 3.85
6046 7413 8.247562 GTGCTATGGGATTTAATAACACAACAA 58.752 33.333 0.00 0.00 29.67 2.83
6139 7506 7.262772 TCCACGTCTAGAAAACAATAGTATGG 58.737 38.462 0.00 0.00 0.00 2.74
6169 7536 3.587061 TGGAAAGCTGGAAGAGGATAACA 59.413 43.478 0.00 0.00 34.07 2.41
6255 7622 0.323725 ATGATGGCCCGAGCAACTTT 60.324 50.000 0.00 0.00 42.56 2.66
6327 7694 1.979155 GCCAAACAGGAAGGCCCTC 60.979 63.158 0.00 0.00 45.60 4.30
6610 7977 2.906389 ACTGACTCCACCAGCTAAATGA 59.094 45.455 0.00 0.00 35.14 2.57
6613 7980 4.326826 TGACTCCACCAGCTAAATGAAAG 58.673 43.478 0.00 0.00 0.00 2.62
6671 8039 3.248024 TGTTTCTCAGACCTGGGTATGT 58.752 45.455 13.13 0.00 38.36 2.29
6695 8063 6.153340 GTCATTTTTGGAGGAAGGATTGATGA 59.847 38.462 0.00 0.00 0.00 2.92
6713 8081 8.907829 ATTGATGACTCTATATCCATGTAGGT 57.092 34.615 0.00 0.00 39.02 3.08
6735 8103 6.373774 AGGTGATCATGTTCAACTCAAGATTC 59.626 38.462 16.98 0.00 39.48 2.52
6760 8128 2.290896 TGTTGAGATTGTTAGCCTGGGG 60.291 50.000 0.00 0.00 0.00 4.96
6795 8163 5.658190 CAGATTTTGGATAGGTTGGGTCATT 59.342 40.000 0.00 0.00 0.00 2.57
6813 8181 5.423886 GTCATTTAGAGTTCTGGGGAAGAG 58.576 45.833 0.00 0.00 35.91 2.85
6817 8185 5.485209 TTAGAGTTCTGGGGAAGAGAAAC 57.515 43.478 0.00 0.00 35.91 2.78
6822 8190 4.019231 AGTTCTGGGGAAGAGAAACCATAC 60.019 45.833 0.00 0.00 35.91 2.39
6984 8371 6.071952 AGTGTGTTTGTTCACTCATTTCACTT 60.072 34.615 0.00 0.00 40.28 3.16
6986 8373 7.753132 GTGTGTTTGTTCACTCATTTCACTTTA 59.247 33.333 0.00 0.00 38.90 1.85
7018 8451 7.338957 AGAACGGAGTAGTATATGTTATAGCCC 59.661 40.741 0.00 0.00 45.00 5.19
7029 8462 4.093472 TGTTATAGCCCAGTGTTGTGTT 57.907 40.909 0.00 0.00 0.00 3.32
7030 8463 3.818210 TGTTATAGCCCAGTGTTGTGTTG 59.182 43.478 0.00 0.00 0.00 3.33
7031 8464 2.656947 ATAGCCCAGTGTTGTGTTGT 57.343 45.000 0.00 0.00 0.00 3.32
7032 8465 1.674359 TAGCCCAGTGTTGTGTTGTG 58.326 50.000 0.00 0.00 0.00 3.33
7068 8504 2.164422 GGCTTTATTTGCTGGTCCTCAC 59.836 50.000 0.00 0.00 0.00 3.51
7077 8513 0.035881 CTGGTCCTCACTGCACACAT 59.964 55.000 0.00 0.00 0.00 3.21
7078 8514 1.276138 CTGGTCCTCACTGCACACATA 59.724 52.381 0.00 0.00 0.00 2.29
7144 8580 2.815478 TGGTTTTGCAATTGACCGTTC 58.185 42.857 10.34 0.00 34.90 3.95
7210 8646 9.177608 CAATTGACTGAATTTAGAATCTGGGTA 57.822 33.333 3.94 0.00 31.41 3.69
7211 8647 8.970859 ATTGACTGAATTTAGAATCTGGGTAG 57.029 34.615 3.94 0.00 0.00 3.18
7212 8648 7.496346 TGACTGAATTTAGAATCTGGGTAGT 57.504 36.000 3.94 0.00 0.00 2.73
7214 8650 7.824289 TGACTGAATTTAGAATCTGGGTAGTTG 59.176 37.037 3.94 0.00 0.00 3.16
7215 8651 7.918076 ACTGAATTTAGAATCTGGGTAGTTGA 58.082 34.615 3.94 0.00 0.00 3.18
7228 8665 3.421844 GGTAGTTGAATTGTTCCCAGCT 58.578 45.455 0.00 0.00 0.00 4.24
7249 8686 2.235891 GTTGGATGGAAAAGGAACCGT 58.764 47.619 0.00 0.00 0.00 4.83
7264 8702 5.205056 AGGAACCGTCAGATCTTCTATCTT 58.795 41.667 0.00 0.00 0.00 2.40
7265 8703 5.659079 AGGAACCGTCAGATCTTCTATCTTT 59.341 40.000 0.00 0.00 0.00 2.52
7266 8704 6.155393 AGGAACCGTCAGATCTTCTATCTTTT 59.845 38.462 0.00 0.00 0.00 2.27
7300 8738 1.378778 CGTCTTCCTCCTCCCGACT 60.379 63.158 0.00 0.00 0.00 4.18
7317 8755 0.673644 ACTTTGATCTGAACCGCCCG 60.674 55.000 0.00 0.00 0.00 6.13
7336 8774 4.344865 AACCGCCGGCTGAACCAT 62.345 61.111 25.71 0.00 39.03 3.55
7337 8775 3.860930 AACCGCCGGCTGAACCATT 62.861 57.895 25.71 4.76 39.03 3.16
7347 8785 1.753073 GCTGAACCATTTGCCTATGCT 59.247 47.619 0.00 0.00 38.71 3.79
7351 8789 0.032813 ACCATTTGCCTATGCTGCCT 60.033 50.000 0.00 0.00 38.71 4.75
7359 8797 1.816679 CTATGCTGCCTGCGCTTGA 60.817 57.895 9.73 0.00 46.63 3.02
7363 8801 4.189188 CTGCCTGCGCTTGATGGC 62.189 66.667 9.73 14.64 45.10 4.40
7380 8818 4.803426 CGCTCCCGTGACAGCCTC 62.803 72.222 0.00 0.00 31.37 4.70
7404 8842 4.148825 CCGCCCTTCCCTCGACTG 62.149 72.222 0.00 0.00 0.00 3.51
7406 8844 2.579738 GCCCTTCCCTCGACTGTC 59.420 66.667 0.00 0.00 0.00 3.51
7414 8852 1.007271 CCTCGACTGTCGTGTTGCT 60.007 57.895 27.16 0.00 41.35 3.91
7417 8855 2.939022 GACTGTCGTGTTGCTGCC 59.061 61.111 0.00 0.00 0.00 4.85
7437 8875 0.389757 GCCTCGACCATCCCTCTAAC 59.610 60.000 0.00 0.00 0.00 2.34
7438 8876 2.030045 GCCTCGACCATCCCTCTAACT 61.030 57.143 0.00 0.00 0.00 2.24
7439 8877 2.389715 CCTCGACCATCCCTCTAACTT 58.610 52.381 0.00 0.00 0.00 2.66
7443 8881 1.413077 GACCATCCCTCTAACTTCGGG 59.587 57.143 0.00 0.00 39.41 5.14
7449 8887 1.413077 CCCTCTAACTTCGGGGATGAC 59.587 57.143 0.00 0.00 41.25 3.06
7451 8889 2.108168 CTCTAACTTCGGGGATGACCA 58.892 52.381 0.00 0.00 42.91 4.02
7452 8890 2.500098 CTCTAACTTCGGGGATGACCAA 59.500 50.000 0.00 0.00 42.91 3.67
7462 8900 4.412199 TCGGGGATGACCAATTTCTTATCT 59.588 41.667 0.00 0.00 42.91 1.98
7468 8906 6.261826 GGATGACCAATTTCTTATCTGGTGAG 59.738 42.308 0.00 0.00 42.27 3.51
7481 8919 2.746359 GTGAGCCTGCACACCTCT 59.254 61.111 8.28 0.00 38.63 3.69
7482 8920 1.375268 GTGAGCCTGCACACCTCTC 60.375 63.158 8.28 0.00 38.63 3.20
7483 8921 1.534959 TGAGCCTGCACACCTCTCT 60.535 57.895 5.44 0.00 0.00 3.10
7484 8922 1.217779 GAGCCTGCACACCTCTCTC 59.782 63.158 0.00 0.00 0.00 3.20
7485 8923 2.237534 GAGCCTGCACACCTCTCTCC 62.238 65.000 0.00 0.00 0.00 3.71
7486 8924 2.985456 CCTGCACACCTCTCTCCC 59.015 66.667 0.00 0.00 0.00 4.30
7487 8925 1.611851 CCTGCACACCTCTCTCCCT 60.612 63.158 0.00 0.00 0.00 4.20
7488 8926 1.612395 CCTGCACACCTCTCTCCCTC 61.612 65.000 0.00 0.00 0.00 4.30
7489 8927 1.610673 TGCACACCTCTCTCCCTCC 60.611 63.158 0.00 0.00 0.00 4.30
7490 8928 1.305718 GCACACCTCTCTCCCTCCT 60.306 63.158 0.00 0.00 0.00 3.69
7491 8929 1.326951 GCACACCTCTCTCCCTCCTC 61.327 65.000 0.00 0.00 0.00 3.71
7492 8930 0.334676 CACACCTCTCTCCCTCCTCT 59.665 60.000 0.00 0.00 0.00 3.69
7498 8936 0.047176 TCTCTCCCTCCTCTCTCCCT 59.953 60.000 0.00 0.00 0.00 4.20
7504 8942 1.075600 CTCCTCTCTCCCTCACCCC 60.076 68.421 0.00 0.00 0.00 4.95
7506 8944 2.780693 CTCTCTCCCTCACCCCCA 59.219 66.667 0.00 0.00 0.00 4.96
7526 8964 4.104738 CCCACACACCCCAAGATAGATAAT 59.895 45.833 0.00 0.00 0.00 1.28
7528 8966 5.065914 CACACACCCCAAGATAGATAATGG 58.934 45.833 0.00 0.00 0.00 3.16
7551 8989 2.234908 GTCGCCTGCCATCCTAAGATAT 59.765 50.000 0.00 0.00 0.00 1.63
7553 8991 3.447586 TCGCCTGCCATCCTAAGATATAC 59.552 47.826 0.00 0.00 0.00 1.47
7603 9041 1.539157 GACCAAGAGGGCTTTTCTGG 58.461 55.000 0.00 0.00 41.07 3.86
7604 9042 0.853530 ACCAAGAGGGCTTTTCTGGT 59.146 50.000 0.00 0.00 42.05 4.00
7605 9043 1.251251 CCAAGAGGGCTTTTCTGGTG 58.749 55.000 0.00 0.00 30.14 4.17
7606 9044 1.202927 CCAAGAGGGCTTTTCTGGTGA 60.203 52.381 0.00 0.00 30.14 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 2.780643 CGACAACGATGCTGCAGG 59.219 61.111 17.12 5.17 42.66 4.85
5 6 1.969809 GATGCGACAACGATGCTGCA 61.970 55.000 13.37 13.37 42.66 4.41
6 7 1.297158 GATGCGACAACGATGCTGC 60.297 57.895 3.25 3.25 42.66 5.25
7 8 0.654160 ATGATGCGACAACGATGCTG 59.346 50.000 0.00 0.00 42.66 4.41
8 9 0.654160 CATGATGCGACAACGATGCT 59.346 50.000 0.00 0.00 42.66 3.79
9 10 0.374758 ACATGATGCGACAACGATGC 59.625 50.000 0.00 0.00 42.66 3.91
10 11 1.853253 GCACATGATGCGACAACGATG 60.853 52.381 0.00 0.00 46.55 3.84
11 12 0.374758 GCACATGATGCGACAACGAT 59.625 50.000 0.00 0.00 46.55 3.73
12 13 1.787215 GCACATGATGCGACAACGA 59.213 52.632 0.00 0.00 46.55 3.85
13 14 4.348081 GCACATGATGCGACAACG 57.652 55.556 0.00 0.00 46.55 4.10
21 22 3.558829 CCTACAAGCACTAGCACATGATG 59.441 47.826 0.00 0.00 45.49 3.07
22 23 3.452264 TCCTACAAGCACTAGCACATGAT 59.548 43.478 0.00 0.00 45.49 2.45
23 24 2.831526 TCCTACAAGCACTAGCACATGA 59.168 45.455 0.00 0.00 45.49 3.07
24 25 3.251479 TCCTACAAGCACTAGCACATG 57.749 47.619 0.00 0.00 45.49 3.21
25 26 5.360591 GTTATCCTACAAGCACTAGCACAT 58.639 41.667 0.00 0.00 45.49 3.21
26 27 4.382685 GGTTATCCTACAAGCACTAGCACA 60.383 45.833 0.00 0.00 45.49 4.57
27 28 4.120589 GGTTATCCTACAAGCACTAGCAC 58.879 47.826 0.00 0.00 45.49 4.40
28 29 3.181479 CGGTTATCCTACAAGCACTAGCA 60.181 47.826 0.00 0.00 45.49 3.49
29 30 3.067742 TCGGTTATCCTACAAGCACTAGC 59.932 47.826 0.00 0.00 42.56 3.42
30 31 4.338682 AGTCGGTTATCCTACAAGCACTAG 59.661 45.833 0.00 0.00 32.63 2.57
31 32 4.275810 AGTCGGTTATCCTACAAGCACTA 58.724 43.478 0.00 0.00 32.63 2.74
32 33 3.097614 AGTCGGTTATCCTACAAGCACT 58.902 45.455 0.00 0.00 32.63 4.40
33 34 3.119245 TGAGTCGGTTATCCTACAAGCAC 60.119 47.826 0.00 0.00 32.63 4.40
34 35 3.093814 TGAGTCGGTTATCCTACAAGCA 58.906 45.455 0.00 0.00 32.63 3.91
35 36 3.795623 TGAGTCGGTTATCCTACAAGC 57.204 47.619 0.00 0.00 32.63 4.01
36 37 4.103357 CGTTGAGTCGGTTATCCTACAAG 58.897 47.826 0.00 0.00 32.63 3.16
37 38 3.674138 GCGTTGAGTCGGTTATCCTACAA 60.674 47.826 0.00 0.00 32.63 2.41
38 39 2.159338 GCGTTGAGTCGGTTATCCTACA 60.159 50.000 0.00 0.00 32.63 2.74
39 40 2.457970 GCGTTGAGTCGGTTATCCTAC 58.542 52.381 0.00 0.00 0.00 3.18
40 41 1.406539 GGCGTTGAGTCGGTTATCCTA 59.593 52.381 0.00 0.00 0.00 2.94
41 42 0.175073 GGCGTTGAGTCGGTTATCCT 59.825 55.000 0.00 0.00 0.00 3.24
42 43 0.808847 GGGCGTTGAGTCGGTTATCC 60.809 60.000 0.00 0.00 0.00 2.59
43 44 1.143969 CGGGCGTTGAGTCGGTTATC 61.144 60.000 0.00 0.00 0.00 1.75
44 45 1.153706 CGGGCGTTGAGTCGGTTAT 60.154 57.895 0.00 0.00 0.00 1.89
45 46 2.259204 CGGGCGTTGAGTCGGTTA 59.741 61.111 0.00 0.00 0.00 2.85
49 50 4.072088 GTTGCGGGCGTTGAGTCG 62.072 66.667 0.00 0.00 0.00 4.18
50 51 2.054140 TTTGTTGCGGGCGTTGAGTC 62.054 55.000 0.00 0.00 0.00 3.36
51 52 1.658686 TTTTGTTGCGGGCGTTGAGT 61.659 50.000 0.00 0.00 0.00 3.41
52 53 0.526524 TTTTTGTTGCGGGCGTTGAG 60.527 50.000 0.00 0.00 0.00 3.02
53 54 0.103208 ATTTTTGTTGCGGGCGTTGA 59.897 45.000 0.00 0.00 0.00 3.18
54 55 0.933796 AATTTTTGTTGCGGGCGTTG 59.066 45.000 0.00 0.00 0.00 4.10
55 56 1.202475 AGAATTTTTGTTGCGGGCGTT 60.202 42.857 0.00 0.00 0.00 4.84
56 57 0.387565 AGAATTTTTGTTGCGGGCGT 59.612 45.000 0.00 0.00 0.00 5.68
57 58 1.496934 AAGAATTTTTGTTGCGGGCG 58.503 45.000 0.00 0.00 0.00 6.13
58 59 3.370672 CCATAAGAATTTTTGTTGCGGGC 59.629 43.478 0.00 0.00 0.00 6.13
59 60 4.815269 TCCATAAGAATTTTTGTTGCGGG 58.185 39.130 0.00 0.00 0.00 6.13
60 61 5.519927 GGATCCATAAGAATTTTTGTTGCGG 59.480 40.000 6.95 0.00 0.00 5.69
61 62 5.519927 GGGATCCATAAGAATTTTTGTTGCG 59.480 40.000 15.23 0.00 0.00 4.85
62 63 5.817296 GGGGATCCATAAGAATTTTTGTTGC 59.183 40.000 15.23 0.00 0.00 4.17
63 64 6.945218 TGGGGATCCATAAGAATTTTTGTTG 58.055 36.000 15.23 0.00 38.32 3.33
64 65 7.566658 TTGGGGATCCATAAGAATTTTTGTT 57.433 32.000 15.23 0.00 43.63 2.83
65 66 7.566658 TTTGGGGATCCATAAGAATTTTTGT 57.433 32.000 15.23 0.00 43.63 2.83
66 67 8.860780 TTTTTGGGGATCCATAAGAATTTTTG 57.139 30.769 15.23 0.00 43.63 2.44
89 90 3.320541 TGTTGGAACTGGCGATCATTTTT 59.679 39.130 0.00 0.00 0.00 1.94
90 91 2.890311 TGTTGGAACTGGCGATCATTTT 59.110 40.909 0.00 0.00 0.00 1.82
91 92 2.513753 TGTTGGAACTGGCGATCATTT 58.486 42.857 0.00 0.00 0.00 2.32
92 93 2.198827 TGTTGGAACTGGCGATCATT 57.801 45.000 0.00 0.00 0.00 2.57
93 94 2.198827 TTGTTGGAACTGGCGATCAT 57.801 45.000 0.00 0.00 0.00 2.45
94 95 1.974265 TTTGTTGGAACTGGCGATCA 58.026 45.000 0.00 0.00 0.00 2.92
95 96 3.049912 GTTTTTGTTGGAACTGGCGATC 58.950 45.455 0.00 0.00 0.00 3.69
96 97 2.428890 TGTTTTTGTTGGAACTGGCGAT 59.571 40.909 0.00 0.00 0.00 4.58
97 98 1.819288 TGTTTTTGTTGGAACTGGCGA 59.181 42.857 0.00 0.00 0.00 5.54
98 99 2.285827 TGTTTTTGTTGGAACTGGCG 57.714 45.000 0.00 0.00 0.00 5.69
99 100 3.555547 GTCATGTTTTTGTTGGAACTGGC 59.444 43.478 0.00 0.00 0.00 4.85
100 101 5.009854 AGTCATGTTTTTGTTGGAACTGG 57.990 39.130 0.00 0.00 0.00 4.00
101 102 5.220453 GCAAGTCATGTTTTTGTTGGAACTG 60.220 40.000 0.00 0.00 0.00 3.16
102 103 4.869861 GCAAGTCATGTTTTTGTTGGAACT 59.130 37.500 0.00 0.00 0.00 3.01
103 104 4.033932 GGCAAGTCATGTTTTTGTTGGAAC 59.966 41.667 0.00 0.00 0.00 3.62
104 105 4.187694 GGCAAGTCATGTTTTTGTTGGAA 58.812 39.130 0.00 0.00 0.00 3.53
105 106 3.736433 CGGCAAGTCATGTTTTTGTTGGA 60.736 43.478 0.00 0.00 0.00 3.53
106 107 2.539274 CGGCAAGTCATGTTTTTGTTGG 59.461 45.455 0.00 0.00 0.00 3.77
107 108 2.033832 GCGGCAAGTCATGTTTTTGTTG 60.034 45.455 0.00 0.00 0.00 3.33
108 109 2.200899 GCGGCAAGTCATGTTTTTGTT 58.799 42.857 0.00 0.00 0.00 2.83
109 110 1.537990 GGCGGCAAGTCATGTTTTTGT 60.538 47.619 3.07 0.00 0.00 2.83
110 111 1.139163 GGCGGCAAGTCATGTTTTTG 58.861 50.000 3.07 0.00 0.00 2.44
111 112 1.039856 AGGCGGCAAGTCATGTTTTT 58.960 45.000 13.08 0.00 0.00 1.94
112 113 1.039856 AAGGCGGCAAGTCATGTTTT 58.960 45.000 13.08 0.00 0.00 2.43
113 114 1.039856 AAAGGCGGCAAGTCATGTTT 58.960 45.000 13.08 0.00 0.00 2.83
114 115 0.314935 CAAAGGCGGCAAGTCATGTT 59.685 50.000 13.08 0.00 0.00 2.71
115 116 1.526575 CCAAAGGCGGCAAGTCATGT 61.527 55.000 13.08 0.00 0.00 3.21
116 117 1.213537 CCAAAGGCGGCAAGTCATG 59.786 57.895 13.08 0.20 0.00 3.07
117 118 1.978617 CCCAAAGGCGGCAAGTCAT 60.979 57.895 13.08 0.00 0.00 3.06
118 119 2.597217 CCCAAAGGCGGCAAGTCA 60.597 61.111 13.08 0.00 0.00 3.41
119 120 2.597510 ACCCAAAGGCGGCAAGTC 60.598 61.111 13.08 0.00 36.11 3.01
120 121 2.597510 GACCCAAAGGCGGCAAGT 60.598 61.111 13.08 0.00 36.11 3.16
121 122 3.737172 CGACCCAAAGGCGGCAAG 61.737 66.667 13.08 0.00 36.11 4.01
125 126 4.038080 GTTGCGACCCAAAGGCGG 62.038 66.667 0.00 0.00 34.68 6.13
126 127 2.343163 TTTGTTGCGACCCAAAGGCG 62.343 55.000 0.45 0.00 34.68 5.52
127 128 0.179097 TTTTGTTGCGACCCAAAGGC 60.179 50.000 0.45 0.00 34.68 4.35
128 129 2.301577 TTTTTGTTGCGACCCAAAGG 57.698 45.000 0.45 0.00 34.68 3.11
129 130 2.032979 GCATTTTTGTTGCGACCCAAAG 60.033 45.455 0.45 0.00 34.68 2.77
130 131 1.936547 GCATTTTTGTTGCGACCCAAA 59.063 42.857 0.45 0.97 34.68 3.28
131 132 1.137872 AGCATTTTTGTTGCGACCCAA 59.862 42.857 0.45 0.00 44.82 4.12
132 133 0.749649 AGCATTTTTGTTGCGACCCA 59.250 45.000 0.45 0.00 44.82 4.51
133 134 1.864565 AAGCATTTTTGTTGCGACCC 58.135 45.000 0.45 0.00 44.82 4.46
134 135 3.181575 GTGTAAGCATTTTTGTTGCGACC 59.818 43.478 0.45 0.00 44.82 4.79
135 136 3.121828 CGTGTAAGCATTTTTGTTGCGAC 60.122 43.478 0.00 0.00 44.82 5.19
136 137 3.039405 CGTGTAAGCATTTTTGTTGCGA 58.961 40.909 0.00 0.00 44.82 5.10
137 138 3.039405 TCGTGTAAGCATTTTTGTTGCG 58.961 40.909 0.00 0.00 44.82 4.85
138 139 4.089923 GGATCGTGTAAGCATTTTTGTTGC 59.910 41.667 0.00 0.00 40.45 4.17
139 140 4.621034 GGGATCGTGTAAGCATTTTTGTTG 59.379 41.667 0.00 0.00 0.00 3.33
140 141 4.279671 TGGGATCGTGTAAGCATTTTTGTT 59.720 37.500 0.00 0.00 0.00 2.83
141 142 3.823873 TGGGATCGTGTAAGCATTTTTGT 59.176 39.130 0.00 0.00 0.00 2.83
142 143 4.414852 CTGGGATCGTGTAAGCATTTTTG 58.585 43.478 0.00 0.00 0.00 2.44
143 144 3.119495 GCTGGGATCGTGTAAGCATTTTT 60.119 43.478 0.00 0.00 34.01 1.94
144 145 2.423538 GCTGGGATCGTGTAAGCATTTT 59.576 45.455 0.00 0.00 34.01 1.82
145 146 2.017049 GCTGGGATCGTGTAAGCATTT 58.983 47.619 0.00 0.00 34.01 2.32
146 147 1.065491 TGCTGGGATCGTGTAAGCATT 60.065 47.619 0.00 0.00 38.88 3.56
147 148 0.541392 TGCTGGGATCGTGTAAGCAT 59.459 50.000 0.00 0.00 38.88 3.79
148 149 0.323302 TTGCTGGGATCGTGTAAGCA 59.677 50.000 0.00 0.00 41.87 3.91
149 150 1.448985 TTTGCTGGGATCGTGTAAGC 58.551 50.000 0.00 0.00 0.00 3.09
207 208 3.291101 TAGGACCAACGGCTGCGAC 62.291 63.158 0.00 0.00 0.00 5.19
208 209 2.992689 TAGGACCAACGGCTGCGA 60.993 61.111 0.00 0.00 0.00 5.10
209 210 1.940883 TACTAGGACCAACGGCTGCG 61.941 60.000 0.00 0.00 0.00 5.18
210 211 0.248289 TTACTAGGACCAACGGCTGC 59.752 55.000 0.00 0.00 0.00 5.25
211 212 2.754946 TTTACTAGGACCAACGGCTG 57.245 50.000 0.00 0.00 0.00 4.85
212 213 3.994931 ATTTTACTAGGACCAACGGCT 57.005 42.857 0.00 0.00 0.00 5.52
213 214 5.181009 AGTTATTTTACTAGGACCAACGGC 58.819 41.667 0.00 0.00 0.00 5.68
214 215 6.478016 GCTAGTTATTTTACTAGGACCAACGG 59.522 42.308 11.52 0.00 45.01 4.44
215 216 7.263496 AGCTAGTTATTTTACTAGGACCAACG 58.737 38.462 11.52 0.00 45.01 4.10
216 217 9.747293 CTAGCTAGTTATTTTACTAGGACCAAC 57.253 37.037 12.92 0.00 45.01 3.77
217 218 9.484806 ACTAGCTAGTTATTTTACTAGGACCAA 57.515 33.333 20.95 0.00 45.01 3.67
218 219 9.484806 AACTAGCTAGTTATTTTACTAGGACCA 57.515 33.333 32.78 0.00 45.01 4.02
219 220 9.747293 CAACTAGCTAGTTATTTTACTAGGACC 57.253 37.037 33.06 0.00 44.19 4.46
225 226 9.583765 GTGCTACAACTAGCTAGTTATTTTACT 57.416 33.333 33.06 11.29 44.19 2.24
226 227 9.362539 TGTGCTACAACTAGCTAGTTATTTTAC 57.637 33.333 33.06 26.76 44.19 2.01
227 228 9.932207 TTGTGCTACAACTAGCTAGTTATTTTA 57.068 29.630 33.06 21.12 44.19 1.52
228 229 8.842358 TTGTGCTACAACTAGCTAGTTATTTT 57.158 30.769 33.06 21.13 44.19 1.82
231 232 9.915629 GATATTGTGCTACAACTAGCTAGTTAT 57.084 33.333 33.06 26.98 44.19 1.89
232 233 8.074370 CGATATTGTGCTACAACTAGCTAGTTA 58.926 37.037 33.06 20.62 44.19 2.24
233 234 6.918569 CGATATTGTGCTACAACTAGCTAGTT 59.081 38.462 29.48 29.48 46.76 2.24
234 235 6.039493 ACGATATTGTGCTACAACTAGCTAGT 59.961 38.462 20.95 20.95 45.20 2.57
235 236 6.360947 CACGATATTGTGCTACAACTAGCTAG 59.639 42.308 19.44 19.44 45.20 3.42
236 237 6.206498 CACGATATTGTGCTACAACTAGCTA 58.794 40.000 10.18 0.00 45.20 3.32
237 238 5.043903 CACGATATTGTGCTACAACTAGCT 58.956 41.667 10.18 0.00 45.20 3.32
238 239 5.316488 CACGATATTGTGCTACAACTAGC 57.684 43.478 10.18 0.00 41.40 3.42
249 250 4.153296 TGTTGTAACCAGCACGATATTGTG 59.847 41.667 17.52 17.52 42.81 3.33
250 251 4.153475 GTGTTGTAACCAGCACGATATTGT 59.847 41.667 0.00 0.00 41.88 2.71
251 252 4.647964 GTGTTGTAACCAGCACGATATTG 58.352 43.478 0.00 0.00 41.88 1.90
252 253 4.939509 GTGTTGTAACCAGCACGATATT 57.060 40.909 0.00 0.00 41.88 1.28
258 259 0.231279 CGACGTGTTGTAACCAGCAC 59.769 55.000 0.00 0.28 45.99 4.40
259 260 0.102663 TCGACGTGTTGTAACCAGCA 59.897 50.000 0.00 0.00 0.00 4.41
260 261 0.505655 GTCGACGTGTTGTAACCAGC 59.494 55.000 0.00 0.00 0.00 4.85
261 262 2.049228 GAGTCGACGTGTTGTAACCAG 58.951 52.381 10.46 0.00 0.00 4.00
262 263 1.597690 CGAGTCGACGTGTTGTAACCA 60.598 52.381 6.73 0.00 0.00 3.67
263 264 1.047739 CGAGTCGACGTGTTGTAACC 58.952 55.000 6.73 0.00 0.00 2.85
264 265 0.428618 GCGAGTCGACGTGTTGTAAC 59.571 55.000 18.61 0.00 35.59 2.50
265 266 0.661187 GGCGAGTCGACGTGTTGTAA 60.661 55.000 18.61 0.00 35.59 2.41
266 267 1.081906 GGCGAGTCGACGTGTTGTA 60.082 57.895 18.61 0.00 35.59 2.41
267 268 2.354305 GGCGAGTCGACGTGTTGT 60.354 61.111 18.61 0.00 35.59 3.32
277 278 0.725784 TTTTCGTACGACGGCGAGTC 60.726 55.000 22.49 5.99 42.81 3.36
278 279 0.317770 TTTTTCGTACGACGGCGAGT 60.318 50.000 22.49 15.92 42.81 4.18
279 280 0.090178 GTTTTTCGTACGACGGCGAG 59.910 55.000 22.49 8.70 42.81 5.03
280 281 0.593518 TGTTTTTCGTACGACGGCGA 60.594 50.000 22.49 11.65 42.81 5.54
281 282 0.229247 TTGTTTTTCGTACGACGGCG 59.771 50.000 19.36 10.39 42.81 6.46
282 283 1.005137 TGTTGTTTTTCGTACGACGGC 60.005 47.619 19.36 9.21 42.81 5.68
283 284 2.597272 GGTGTTGTTTTTCGTACGACGG 60.597 50.000 19.36 0.00 42.81 4.79
284 285 2.282290 AGGTGTTGTTTTTCGTACGACG 59.718 45.455 19.36 0.00 44.19 5.12
285 286 3.600011 CGAGGTGTTGTTTTTCGTACGAC 60.600 47.826 19.36 7.73 0.00 4.34
286 287 2.535166 CGAGGTGTTGTTTTTCGTACGA 59.465 45.455 15.28 15.28 0.00 3.43
287 288 2.535166 TCGAGGTGTTGTTTTTCGTACG 59.465 45.455 9.53 9.53 33.35 3.67
288 289 3.553105 AGTCGAGGTGTTGTTTTTCGTAC 59.447 43.478 0.00 0.00 33.35 3.67
289 290 3.784338 AGTCGAGGTGTTGTTTTTCGTA 58.216 40.909 0.00 0.00 33.35 3.43
290 291 2.606272 GAGTCGAGGTGTTGTTTTTCGT 59.394 45.455 0.00 0.00 33.35 3.85
291 292 2.347292 CGAGTCGAGGTGTTGTTTTTCG 60.347 50.000 6.73 0.00 0.00 3.46
292 293 2.599142 GCGAGTCGAGGTGTTGTTTTTC 60.599 50.000 18.61 0.00 0.00 2.29
293 294 1.329599 GCGAGTCGAGGTGTTGTTTTT 59.670 47.619 18.61 0.00 0.00 1.94
294 295 0.935196 GCGAGTCGAGGTGTTGTTTT 59.065 50.000 18.61 0.00 0.00 2.43
295 296 0.878961 GGCGAGTCGAGGTGTTGTTT 60.879 55.000 18.61 0.00 0.00 2.83
296 297 1.300697 GGCGAGTCGAGGTGTTGTT 60.301 57.895 18.61 0.00 0.00 2.83
297 298 2.338984 GGCGAGTCGAGGTGTTGT 59.661 61.111 18.61 0.00 0.00 3.32
298 299 2.805353 CGGCGAGTCGAGGTGTTG 60.805 66.667 18.61 0.00 0.00 3.33
299 300 4.719369 GCGGCGAGTCGAGGTGTT 62.719 66.667 18.61 0.00 0.00 3.32
325 326 3.747976 GATGGCAACCACCGGTGC 61.748 66.667 29.75 17.77 35.80 5.01
326 327 3.061848 GGATGGCAACCACCGGTG 61.062 66.667 28.26 28.26 35.80 4.94
327 328 3.567579 CTGGATGGCAACCACCGGT 62.568 63.158 13.03 0.00 35.80 5.28
328 329 2.751436 CTGGATGGCAACCACCGG 60.751 66.667 13.03 0.00 35.80 5.28
329 330 3.443045 GCTGGATGGCAACCACCG 61.443 66.667 13.03 5.53 35.80 4.94
330 331 2.036256 AGCTGGATGGCAACCACC 59.964 61.111 13.03 6.69 35.80 4.61
331 332 2.401766 CGAGCTGGATGGCAACCAC 61.402 63.158 13.03 9.92 35.80 4.16
332 333 2.046023 CGAGCTGGATGGCAACCA 60.046 61.111 16.22 16.22 38.19 3.67
333 334 2.045926 ACGAGCTGGATGGCAACC 60.046 61.111 6.88 6.88 34.17 3.77
334 335 3.044059 GCACGAGCTGGATGGCAAC 62.044 63.158 1.44 0.00 37.91 4.17
335 336 2.747460 GCACGAGCTGGATGGCAA 60.747 61.111 1.44 0.00 37.91 4.52
343 344 3.430565 TAGCATCCCGCACGAGCTG 62.431 63.158 2.73 0.00 46.13 4.24
344 345 3.144120 CTAGCATCCCGCACGAGCT 62.144 63.158 2.73 0.00 46.13 4.09
345 346 2.659897 CTAGCATCCCGCACGAGC 60.660 66.667 0.00 0.00 46.13 5.03
346 347 1.141881 AACTAGCATCCCGCACGAG 59.858 57.895 0.00 0.00 46.13 4.18
347 348 1.153647 CAACTAGCATCCCGCACGA 60.154 57.895 0.00 0.00 46.13 4.35
348 349 2.813179 GCAACTAGCATCCCGCACG 61.813 63.158 0.00 0.00 46.13 5.34
349 350 3.102097 GCAACTAGCATCCCGCAC 58.898 61.111 0.00 0.00 46.13 5.34
358 359 2.358737 ACGGGTGCTGCAACTAGC 60.359 61.111 18.32 0.00 43.95 3.42
359 360 2.094659 CGACGGGTGCTGCAACTAG 61.095 63.158 18.32 14.14 0.00 2.57
360 361 2.048597 CGACGGGTGCTGCAACTA 60.049 61.111 18.32 0.00 0.00 2.24
361 362 4.235762 ACGACGGGTGCTGCAACT 62.236 61.111 18.32 0.00 0.00 3.16
362 363 3.712881 GACGACGGGTGCTGCAAC 61.713 66.667 9.71 9.71 0.00 4.17
365 366 4.796231 ATCGACGACGGGTGCTGC 62.796 66.667 7.55 0.00 40.21 5.25
366 367 2.880879 CATCGACGACGGGTGCTG 60.881 66.667 7.55 0.00 40.21 4.41
367 368 4.796231 GCATCGACGACGGGTGCT 62.796 66.667 22.49 0.00 42.89 4.40
369 370 3.179265 GTGCATCGACGACGGGTG 61.179 66.667 7.55 8.16 40.21 4.61
370 371 4.430765 GGTGCATCGACGACGGGT 62.431 66.667 7.55 0.00 40.21 5.28
371 372 4.129737 AGGTGCATCGACGACGGG 62.130 66.667 7.55 1.55 40.21 5.28
372 373 2.880879 CAGGTGCATCGACGACGG 60.881 66.667 7.55 0.00 40.21 4.79
373 374 2.880879 CCAGGTGCATCGACGACG 60.881 66.667 0.00 0.00 41.26 5.12
374 375 1.374252 AACCAGGTGCATCGACGAC 60.374 57.895 0.00 0.00 0.00 4.34
375 376 1.374125 CAACCAGGTGCATCGACGA 60.374 57.895 0.00 0.00 0.00 4.20
376 377 1.667830 ACAACCAGGTGCATCGACG 60.668 57.895 0.00 0.00 0.00 5.12
377 378 1.868997 CACAACCAGGTGCATCGAC 59.131 57.895 0.00 0.00 31.10 4.20
378 379 4.377370 CACAACCAGGTGCATCGA 57.623 55.556 0.00 0.00 31.10 3.59
384 385 2.334946 CGGGATGCACAACCAGGTG 61.335 63.158 0.00 0.00 41.72 4.00
385 386 2.034066 CGGGATGCACAACCAGGT 59.966 61.111 8.35 0.00 0.00 4.00
386 387 3.443045 GCGGGATGCACAACCAGG 61.443 66.667 8.35 0.00 45.45 4.45
395 396 0.248215 CAACGATTTCAGCGGGATGC 60.248 55.000 0.00 0.00 46.98 3.91
396 397 1.062587 GACAACGATTTCAGCGGGATG 59.937 52.381 0.00 0.00 0.00 3.51
397 398 1.369625 GACAACGATTTCAGCGGGAT 58.630 50.000 0.00 0.00 0.00 3.85
398 399 1.011968 CGACAACGATTTCAGCGGGA 61.012 55.000 0.00 0.00 42.66 5.14
399 400 1.419922 CGACAACGATTTCAGCGGG 59.580 57.895 0.00 0.00 42.66 6.13
400 401 1.225745 GCGACAACGATTTCAGCGG 60.226 57.895 0.00 0.00 42.66 5.52
401 402 0.110867 TTGCGACAACGATTTCAGCG 60.111 50.000 0.00 0.00 42.66 5.18
402 403 2.031037 TTTGCGACAACGATTTCAGC 57.969 45.000 0.00 0.00 42.66 4.26
403 404 3.295397 CGATTTTGCGACAACGATTTCAG 59.705 43.478 0.00 0.00 42.66 3.02
404 405 3.222361 CGATTTTGCGACAACGATTTCA 58.778 40.909 0.00 0.00 42.66 2.69
405 406 2.025222 GCGATTTTGCGACAACGATTTC 59.975 45.455 0.00 0.00 42.66 2.17
406 407 1.976045 GCGATTTTGCGACAACGATTT 59.024 42.857 0.00 0.00 42.66 2.17
407 408 1.602191 GCGATTTTGCGACAACGATT 58.398 45.000 0.00 0.00 42.66 3.34
408 409 3.290098 GCGATTTTGCGACAACGAT 57.710 47.368 0.00 0.00 42.66 3.73
409 410 4.810278 GCGATTTTGCGACAACGA 57.190 50.000 0.00 0.00 42.66 3.85
417 418 1.792057 CACGACCACGCGATTTTGC 60.792 57.895 15.93 0.00 43.96 3.68
418 419 1.154488 CCACGACCACGCGATTTTG 60.154 57.895 15.93 0.00 43.96 2.44
419 420 1.301087 TCCACGACCACGCGATTTT 60.301 52.632 15.93 0.00 43.96 1.82
420 421 2.025418 GTCCACGACCACGCGATTT 61.025 57.895 15.93 0.00 43.96 2.17
421 422 2.431942 GTCCACGACCACGCGATT 60.432 61.111 15.93 0.00 43.96 3.34
422 423 3.676605 TGTCCACGACCACGCGAT 61.677 61.111 15.93 0.00 43.96 4.58
423 424 4.634133 GTGTCCACGACCACGCGA 62.634 66.667 15.93 0.00 43.96 5.87
424 425 4.934942 TGTGTCCACGACCACGCG 62.935 66.667 3.53 3.53 43.96 6.01
425 426 1.959226 AATGTGTCCACGACCACGC 60.959 57.895 0.00 0.00 43.96 5.34
426 427 0.598942 TCAATGTGTCCACGACCACG 60.599 55.000 0.00 0.00 45.75 4.94
427 428 1.148310 CTCAATGTGTCCACGACCAC 58.852 55.000 0.00 0.00 0.00 4.16
428 429 0.602638 GCTCAATGTGTCCACGACCA 60.603 55.000 0.00 0.00 0.00 4.02
429 430 1.626654 CGCTCAATGTGTCCACGACC 61.627 60.000 0.00 0.00 0.00 4.79
430 431 1.781555 CGCTCAATGTGTCCACGAC 59.218 57.895 0.00 0.00 0.00 4.34
431 432 2.027073 GCGCTCAATGTGTCCACGA 61.027 57.895 0.00 0.00 0.00 4.35
432 433 2.476051 GCGCTCAATGTGTCCACG 59.524 61.111 0.00 0.00 0.00 4.94
433 434 2.870372 GGCGCTCAATGTGTCCAC 59.130 61.111 7.64 0.00 0.00 4.02
434 435 2.741985 CGGCGCTCAATGTGTCCA 60.742 61.111 7.64 0.00 0.00 4.02
435 436 4.166011 GCGGCGCTCAATGTGTCC 62.166 66.667 26.86 0.00 0.00 4.02
436 437 3.121030 AGCGGCGCTCAATGTGTC 61.121 61.111 31.35 0.00 30.62 3.67
515 517 2.094757 TAGTCTGCACACCCACCACG 62.095 60.000 0.00 0.00 0.00 4.94
539 541 1.069765 CCTGTTCGTCACTGGCTGT 59.930 57.895 0.00 0.00 37.65 4.40
545 555 2.752354 CAGATCTCTCCTGTTCGTCACT 59.248 50.000 0.00 0.00 0.00 3.41
546 556 2.750166 TCAGATCTCTCCTGTTCGTCAC 59.250 50.000 0.00 0.00 33.57 3.67
547 557 3.073274 TCAGATCTCTCCTGTTCGTCA 57.927 47.619 0.00 0.00 33.57 4.35
561 571 4.940654 CACCTTCCCTCTCTTTTTCAGATC 59.059 45.833 0.00 0.00 0.00 2.75
567 577 1.143073 ACGCACCTTCCCTCTCTTTTT 59.857 47.619 0.00 0.00 0.00 1.94
568 578 0.765510 ACGCACCTTCCCTCTCTTTT 59.234 50.000 0.00 0.00 0.00 2.27
579 589 3.303135 TCCGAGCTCACGCACCTT 61.303 61.111 15.40 0.00 39.10 3.50
583 593 4.103103 CTCGTCCGAGCTCACGCA 62.103 66.667 18.86 9.22 39.10 5.24
633 643 8.795786 TCATTCGATCGTTTTTCTTTCATTTT 57.204 26.923 15.94 0.00 0.00 1.82
643 653 3.429085 GCAGCATCATTCGATCGTTTTT 58.571 40.909 15.94 0.00 0.00 1.94
652 662 0.110778 GAGCATCGCAGCATCATTCG 60.111 55.000 0.00 0.00 36.85 3.34
654 664 2.414806 CTAGAGCATCGCAGCATCATT 58.585 47.619 0.00 0.00 42.67 2.57
665 675 5.455056 TTTTATCTCCGTCCTAGAGCATC 57.545 43.478 0.00 0.00 0.00 3.91
669 679 4.021016 CCCCATTTTATCTCCGTCCTAGAG 60.021 50.000 0.00 0.00 0.00 2.43
670 680 3.901844 CCCCATTTTATCTCCGTCCTAGA 59.098 47.826 0.00 0.00 0.00 2.43
726 736 1.735376 AACGTCTCCTATCGCGCCAT 61.735 55.000 0.00 0.00 0.00 4.40
746 756 1.892391 GTTCGATTCGCCCCCATCC 60.892 63.158 0.00 0.00 0.00 3.51
830 848 1.418373 TGAAATCAGACTGCGACACG 58.582 50.000 0.00 0.00 0.00 4.49
989 1015 1.452651 CTGCGCATTGGGATCAGGT 60.453 57.895 12.24 0.00 0.00 4.00
1044 1070 2.951229 AAACAACACGGGAGAGGAAT 57.049 45.000 0.00 0.00 0.00 3.01
1050 1076 0.671796 GGGGAAAAACAACACGGGAG 59.328 55.000 0.00 0.00 0.00 4.30
1059 1085 2.676748 AGAGCACAATGGGGAAAAACA 58.323 42.857 0.00 0.00 0.00 2.83
1060 1086 3.826729 AGTAGAGCACAATGGGGAAAAAC 59.173 43.478 0.00 0.00 0.00 2.43
1265 1821 0.936297 GCCAAGCAGAACAAACAGCG 60.936 55.000 0.00 0.00 0.00 5.18
1298 1856 5.791336 AACTCTCATGGTATTGCTATCGA 57.209 39.130 0.00 0.00 0.00 3.59
1309 1867 4.284490 TCAGCTTTCACTAACTCTCATGGT 59.716 41.667 0.00 0.00 0.00 3.55
1418 1978 1.347320 GCCGGCATATACGCTAGAAC 58.653 55.000 24.80 0.00 0.00 3.01
1447 2007 4.517075 TCCGTTTCAAACAGCAACATGATA 59.483 37.500 0.00 0.00 0.00 2.15
1525 2091 7.880160 TTATACAGTTTGCCATCTTGCTTAT 57.120 32.000 0.00 0.00 0.00 1.73
1613 2179 2.350522 AGAACTATCGCAACTTGCCAG 58.649 47.619 8.20 5.79 41.12 4.85
1691 2257 6.067217 AGGAACATTAAGCTACATCCTTGT 57.933 37.500 0.00 0.00 39.98 3.16
1855 2425 1.404583 GGTGGCCAGCATGATTTCAAC 60.405 52.381 29.70 0.85 39.69 3.18
1904 2474 6.000891 TCATGTGTCAGCTGTCAATTTTAC 57.999 37.500 15.31 3.13 0.00 2.01
2001 2572 9.601217 TCAATTTTCTTACTCTAGCCTATTCAC 57.399 33.333 0.00 0.00 0.00 3.18
2117 2692 4.759516 TGGTACATTTCTTTTTCGGAGC 57.240 40.909 0.00 0.00 0.00 4.70
2134 2709 7.659390 CCAAACATTTAGCCAAGAAAATTGGTA 59.341 33.333 8.34 0.00 41.53 3.25
2147 2722 3.056607 AGTGATGCACCAAACATTTAGCC 60.057 43.478 0.00 0.00 34.49 3.93
2652 3437 4.518249 AGCAGCAGTAACCTTAAATCTCC 58.482 43.478 0.00 0.00 0.00 3.71
2839 3627 5.879223 ACTGCTCAAACAGAAGGAATCATAG 59.121 40.000 0.00 0.00 40.25 2.23
2894 3682 0.467290 GCAGTGAACTTTGGGGTGGA 60.467 55.000 0.00 0.00 0.00 4.02
3053 3841 0.725117 ACGCACAATTAACGCCTAGC 59.275 50.000 0.00 0.00 0.00 3.42
3054 3842 3.465122 AAACGCACAATTAACGCCTAG 57.535 42.857 0.00 0.00 0.00 3.02
3055 3843 3.556513 CAAAACGCACAATTAACGCCTA 58.443 40.909 0.00 0.00 0.00 3.93
3056 3844 2.389998 CAAAACGCACAATTAACGCCT 58.610 42.857 0.00 0.00 0.00 5.52
3057 3845 1.136748 GCAAAACGCACAATTAACGCC 60.137 47.619 0.00 0.00 41.79 5.68
3058 3846 1.136748 GGCAAAACGCACAATTAACGC 60.137 47.619 0.00 0.00 45.17 4.84
3059 3847 2.097637 GTGGCAAAACGCACAATTAACG 60.098 45.455 0.00 0.00 45.17 3.18
3060 3848 2.219903 GGTGGCAAAACGCACAATTAAC 59.780 45.455 0.00 0.00 45.17 2.01
3061 3849 2.474816 GGTGGCAAAACGCACAATTAA 58.525 42.857 0.00 0.00 45.17 1.40
3062 3850 1.600663 CGGTGGCAAAACGCACAATTA 60.601 47.619 0.00 0.00 45.17 1.40
3063 3851 0.873743 CGGTGGCAAAACGCACAATT 60.874 50.000 0.00 0.00 45.17 2.32
3064 3852 1.299773 CGGTGGCAAAACGCACAAT 60.300 52.632 0.00 0.00 45.17 2.71
3065 3853 2.103143 CGGTGGCAAAACGCACAA 59.897 55.556 0.00 0.00 45.17 3.33
3070 3858 2.354539 CAAGGCGGTGGCAAAACG 60.355 61.111 0.00 0.00 42.47 3.60
3071 3859 2.661537 GCAAGGCGGTGGCAAAAC 60.662 61.111 0.00 0.00 42.47 2.43
3082 3870 1.234615 TGGTCAGTAAAGCGCAAGGC 61.235 55.000 11.47 0.00 44.05 4.35
3083 3871 1.234821 TTGGTCAGTAAAGCGCAAGG 58.765 50.000 11.47 0.00 38.28 3.61
3084 3872 2.921126 CTTTGGTCAGTAAAGCGCAAG 58.079 47.619 11.47 0.00 43.44 4.01
3090 3878 2.855180 CATGCGCTTTGGTCAGTAAAG 58.145 47.619 9.73 0.00 38.00 1.85
3091 3879 1.068610 GCATGCGCTTTGGTCAGTAAA 60.069 47.619 9.73 0.00 34.30 2.01
3092 3880 0.521291 GCATGCGCTTTGGTCAGTAA 59.479 50.000 9.73 0.00 34.30 2.24
3093 3881 2.170738 GCATGCGCTTTGGTCAGTA 58.829 52.632 9.73 0.00 34.30 2.74
3094 3882 2.956987 GCATGCGCTTTGGTCAGT 59.043 55.556 9.73 0.00 34.30 3.41
3107 3895 2.313234 GCATAACTGCGCATAAGCATG 58.687 47.619 12.24 11.51 46.97 4.06
3108 3896 2.693797 GCATAACTGCGCATAAGCAT 57.306 45.000 12.24 0.00 46.97 3.79
3119 3907 4.864916 ACGCTTAATCTGTGCATAACTG 57.135 40.909 0.00 0.00 0.00 3.16
3120 3908 5.661458 ACTACGCTTAATCTGTGCATAACT 58.339 37.500 0.00 0.00 0.00 2.24
3121 3909 5.968387 ACTACGCTTAATCTGTGCATAAC 57.032 39.130 0.00 0.00 0.00 1.89
3122 3910 7.307160 GCATAACTACGCTTAATCTGTGCATAA 60.307 37.037 0.00 0.00 0.00 1.90
3123 3911 6.145534 GCATAACTACGCTTAATCTGTGCATA 59.854 38.462 0.00 0.00 0.00 3.14
3124 3912 5.050091 GCATAACTACGCTTAATCTGTGCAT 60.050 40.000 0.00 0.00 0.00 3.96
3125 3913 4.270084 GCATAACTACGCTTAATCTGTGCA 59.730 41.667 0.00 0.00 0.00 4.57
3126 3914 4.606232 CGCATAACTACGCTTAATCTGTGC 60.606 45.833 0.00 0.00 0.00 4.57
3127 3915 4.994734 CGCATAACTACGCTTAATCTGTG 58.005 43.478 0.00 0.00 0.00 3.66
3155 3943 0.165944 CTCTAGGCGTTGGCAAAACG 59.834 55.000 16.88 16.88 45.56 3.60
3156 3944 0.109735 GCTCTAGGCGTTGGCAAAAC 60.110 55.000 0.00 0.00 42.47 2.43
3157 3945 1.241315 GGCTCTAGGCGTTGGCAAAA 61.241 55.000 0.00 0.00 42.47 2.44
3158 3946 1.674322 GGCTCTAGGCGTTGGCAAA 60.674 57.895 0.00 0.00 42.47 3.68
3159 3947 1.261938 TAGGCTCTAGGCGTTGGCAA 61.262 55.000 0.00 0.00 46.23 4.52
3160 3948 1.676678 CTAGGCTCTAGGCGTTGGCA 61.677 60.000 0.00 0.00 46.23 4.92
3161 3949 1.068250 CTAGGCTCTAGGCGTTGGC 59.932 63.158 0.00 0.00 46.23 4.52
3162 3950 1.742768 CCTAGGCTCTAGGCGTTGG 59.257 63.158 13.35 10.22 46.23 3.77
3168 3956 4.350441 GCGCGCCTAGGCTCTAGG 62.350 72.222 30.55 16.12 39.32 3.02
3169 3957 1.516365 TAAGCGCGCCTAGGCTCTAG 61.516 60.000 30.55 18.84 38.88 2.43
3170 3958 1.105167 TTAAGCGCGCCTAGGCTCTA 61.105 55.000 30.55 9.53 38.88 2.43
3171 3959 2.356818 CTTAAGCGCGCCTAGGCTCT 62.357 60.000 30.55 20.68 38.88 4.09
3172 3960 1.951631 CTTAAGCGCGCCTAGGCTC 60.952 63.158 30.55 22.76 38.88 4.70
3173 3961 2.107141 CTTAAGCGCGCCTAGGCT 59.893 61.111 30.55 14.71 42.33 4.58
3174 3962 3.640992 GCTTAAGCGCGCCTAGGC 61.641 66.667 30.33 27.28 37.85 3.93
3211 3999 9.733556 TCAACATGACTACATAAAACCATAGTT 57.266 29.630 0.00 0.00 34.72 2.24
3212 4000 9.905713 ATCAACATGACTACATAAAACCATAGT 57.094 29.630 0.00 0.00 35.09 2.12
3221 4009 9.647797 ACGAAGTTAATCAACATGACTACATAA 57.352 29.630 0.00 0.00 37.78 1.90
3223 4011 9.302345 CTACGAAGTTAATCAACATGACTACAT 57.698 33.333 0.00 0.00 37.78 2.29
3224 4012 8.517056 TCTACGAAGTTAATCAACATGACTACA 58.483 33.333 0.00 0.00 37.78 2.74
3225 4013 8.906636 TCTACGAAGTTAATCAACATGACTAC 57.093 34.615 0.00 0.00 37.78 2.73
3271 4059 6.361748 CGGTTACGAAGTGCTAAATATCTACC 59.638 42.308 0.00 0.00 45.73 3.18
3295 4083 7.078228 GCTAATTTCCAATAACCTGATTAGCG 58.922 38.462 8.77 0.00 39.96 4.26
3316 4104 5.830000 TCAGCTTTCTAGACGTATGCTAA 57.170 39.130 0.00 0.00 0.00 3.09
3371 4159 9.941325 TTTCCATGCAAATTCTAACAATGTAAT 57.059 25.926 0.00 0.00 0.00 1.89
3377 4165 9.859427 CTAATCTTTCCATGCAAATTCTAACAA 57.141 29.630 0.00 0.00 0.00 2.83
3458 4246 5.032846 TCCTGGAGTCCTGTTAGAATGAAT 58.967 41.667 11.33 0.00 0.00 2.57
3469 4257 1.650528 AAGTTCCTCCTGGAGTCCTG 58.349 55.000 21.70 10.11 44.24 3.86
3497 4285 7.174107 TGTACTACATAAGGGTTTGTAGACC 57.826 40.000 14.98 6.85 45.25 3.85
3532 4320 0.109132 GCGGGATGCTGAAAAGGTTG 60.109 55.000 0.00 0.00 41.73 3.77
3549 4337 4.749245 ACTATGAACAAACTTTCAGGCG 57.251 40.909 0.00 0.00 38.87 5.52
3584 4372 6.557110 TGGTTTTACAACTTAGCTCACAAAC 58.443 36.000 0.00 0.00 32.90 2.93
3589 4377 7.399245 AGTTTTGGTTTTACAACTTAGCTCA 57.601 32.000 0.00 0.00 32.90 4.26
3648 4436 6.470235 GCAAATAAGGATTTCAATGTGAGTCG 59.530 38.462 0.00 0.00 32.73 4.18
3674 4462 6.867816 TCTTCATGATGGCATTACACAAAAAC 59.132 34.615 0.00 0.00 30.68 2.43
3705 4493 9.191995 GTCCAACTAATTTTTCACCATAACTTG 57.808 33.333 0.00 0.00 0.00 3.16
3811 4599 9.868277 CAGAGAAGAAGTAAACTCAATGTAGAT 57.132 33.333 0.00 0.00 32.59 1.98
3825 4613 6.420913 AACTACAAAGCCAGAGAAGAAGTA 57.579 37.500 0.00 0.00 0.00 2.24
3865 4653 8.366401 ACAACAATGGATCATTCAATGTAAACA 58.634 29.630 0.00 0.00 31.05 2.83
3870 4658 6.761312 ACAACAACAATGGATCATTCAATGT 58.239 32.000 0.00 0.00 31.05 2.71
3872 4660 9.947433 AAATACAACAACAATGGATCATTCAAT 57.053 25.926 0.00 0.00 31.05 2.57
4296 5085 4.883585 TGATAATTCACCCTGCATCTCAAC 59.116 41.667 0.00 0.00 0.00 3.18
4508 5298 4.906618 TCCTAAGCCTACCACAGAAAAAG 58.093 43.478 0.00 0.00 0.00 2.27
4761 5560 8.922931 TGCATATACCAGATTTTCATGTACAT 57.077 30.769 1.41 1.41 0.00 2.29
4763 5562 8.285394 CACTGCATATACCAGATTTTCATGTAC 58.715 37.037 8.74 0.00 34.47 2.90
4830 5629 7.865706 AGTAAGGAATGTTCATATGTCAACC 57.134 36.000 1.90 10.77 0.00 3.77
4880 5679 6.036083 CCTGTTCTTTAGGTGTGAATATGTCG 59.964 42.308 0.00 0.00 0.00 4.35
4973 5772 5.014202 GGAGTTAAAGGGCACTTTCCAATA 58.986 41.667 19.28 0.00 43.21 1.90
5028 5827 3.115554 GCACACAACAAACATCAGGAAC 58.884 45.455 0.00 0.00 0.00 3.62
5103 5902 6.178324 AGGTACTGAAGCCTAAATTTGTACC 58.822 40.000 16.65 16.65 45.12 3.34
5121 5920 1.550976 GTGCTTAGCTGACCAGGTACT 59.449 52.381 5.60 0.00 40.65 2.73
5213 6013 4.584638 TTAGTAGCCCATTGTTGGTCAT 57.415 40.909 0.00 0.00 41.91 3.06
5234 6034 9.071276 CAGCAAGAAATCCATGTTACCTATATT 57.929 33.333 0.00 0.00 0.00 1.28
5244 6044 1.538047 ACGCAGCAAGAAATCCATGT 58.462 45.000 0.00 0.00 0.00 3.21
5245 6045 2.679837 AGTACGCAGCAAGAAATCCATG 59.320 45.455 0.00 0.00 0.00 3.66
5262 6062 7.603024 AGAGAAGGTACAAACAATAGCAAGTAC 59.397 37.037 0.00 0.00 33.08 2.73
5290 6090 5.123227 AGGATAAATTGTCCACCATACGTG 58.877 41.667 11.34 0.00 42.62 4.49
5347 6147 4.259356 GCGGAACTCCTTATAAACAAGGT 58.741 43.478 2.04 0.00 44.68 3.50
5365 6165 2.577059 CTAAGCGTCCAAGGCGGA 59.423 61.111 5.39 0.00 43.61 5.54
5480 6283 6.040247 GGCATTGTTTATAAGGTGTTAAGGC 58.960 40.000 0.00 0.00 0.00 4.35
5482 6285 8.465999 TCATGGCATTGTTTATAAGGTGTTAAG 58.534 33.333 0.00 0.00 0.00 1.85
5551 6354 6.149973 TCAAGCAATCATGGAAACTAGAACAG 59.850 38.462 0.00 0.00 0.00 3.16
5597 6400 4.706476 TGCACCCTCATTTAATTCCAAGAG 59.294 41.667 0.00 0.00 0.00 2.85
5709 6512 2.560981 TGCATCTAGTTTCGTGGTCTGA 59.439 45.455 0.00 0.00 0.00 3.27
5712 6515 2.960819 AGTGCATCTAGTTTCGTGGTC 58.039 47.619 0.00 0.00 0.00 4.02
5727 7037 8.264347 TCTATTGTGGTATAAATGAGAAGTGCA 58.736 33.333 0.00 0.00 0.00 4.57
5728 7038 8.552034 GTCTATTGTGGTATAAATGAGAAGTGC 58.448 37.037 0.00 0.00 0.00 4.40
5729 7039 9.046296 GGTCTATTGTGGTATAAATGAGAAGTG 57.954 37.037 0.00 0.00 0.00 3.16
5730 7040 8.993424 AGGTCTATTGTGGTATAAATGAGAAGT 58.007 33.333 0.00 0.00 0.00 3.01
5732 7042 9.613428 CAAGGTCTATTGTGGTATAAATGAGAA 57.387 33.333 0.00 0.00 0.00 2.87
5733 7043 8.768397 ACAAGGTCTATTGTGGTATAAATGAGA 58.232 33.333 0.00 0.00 41.76 3.27
5734 7044 8.964476 ACAAGGTCTATTGTGGTATAAATGAG 57.036 34.615 0.00 0.00 41.76 2.90
5735 7045 9.391006 GAACAAGGTCTATTGTGGTATAAATGA 57.609 33.333 0.00 0.00 42.49 2.57
5736 7046 8.621286 GGAACAAGGTCTATTGTGGTATAAATG 58.379 37.037 0.00 0.00 42.49 2.32
5738 7048 7.924541 AGGAACAAGGTCTATTGTGGTATAAA 58.075 34.615 0.00 0.00 42.49 1.40
5741 7051 6.012858 TGAAGGAACAAGGTCTATTGTGGTAT 60.013 38.462 0.00 0.00 42.49 2.73
5742 7052 5.308497 TGAAGGAACAAGGTCTATTGTGGTA 59.692 40.000 0.00 0.00 42.49 3.25
5743 7053 4.104102 TGAAGGAACAAGGTCTATTGTGGT 59.896 41.667 0.00 0.00 42.49 4.16
5789 7154 5.713822 AAATCCGTAGCGTCAAGTAATTC 57.286 39.130 0.00 0.00 0.00 2.17
5801 7166 6.583050 CACTTAGTGCTAGATAAATCCGTAGC 59.417 42.308 0.00 4.92 38.71 3.58
5845 7210 4.127171 CTCCATCCGGAATTATTTGACGT 58.873 43.478 9.01 0.00 42.21 4.34
5863 7228 9.742144 TTTGTGCTTTAAAATATACTACCTCCA 57.258 29.630 0.00 0.00 0.00 3.86
5879 7244 5.069648 TGTCATCCCACATTTTTGTGCTTTA 59.930 36.000 0.59 0.00 38.40 1.85
5882 7247 2.964464 TGTCATCCCACATTTTTGTGCT 59.036 40.909 0.59 0.00 38.40 4.40
6139 7506 1.981256 TCCAGCTTTCCACTTCCAAC 58.019 50.000 0.00 0.00 0.00 3.77
6169 7536 1.621672 GCTGACCTTGCTAGCCCTCT 61.622 60.000 13.29 0.00 0.00 3.69
6255 7622 2.874014 TGACCCATGAGATTGTTTGCA 58.126 42.857 0.00 0.00 0.00 4.08
6264 7631 2.015456 ATAGGCGATGACCCATGAGA 57.985 50.000 0.00 0.00 0.00 3.27
6327 7694 2.438868 TGTCCATGAATATCGGAGCG 57.561 50.000 0.00 0.00 0.00 5.03
6583 7950 2.079925 GCTGGTGGAGTCAGTTTGATC 58.920 52.381 0.00 0.00 34.89 2.92
6613 7980 7.611213 TCAATAAACCTTAGCTAAACTCAGC 57.389 36.000 7.74 0.00 42.12 4.26
6625 7993 6.395780 TCTGTCCCCAATCAATAAACCTTA 57.604 37.500 0.00 0.00 0.00 2.69
6671 8039 6.153340 GTCATCAATCCTTCCTCCAAAAATGA 59.847 38.462 0.00 0.00 0.00 2.57
6695 8063 7.898100 ACATGATCACCTACATGGATATAGAGT 59.102 37.037 0.00 0.00 45.31 3.24
6713 8081 6.938596 ACTGAATCTTGAGTTGAACATGATCA 59.061 34.615 0.83 0.83 33.27 2.92
6735 8103 4.083110 CCAGGCTAACAATCTCAACAACTG 60.083 45.833 0.00 0.00 0.00 3.16
6760 8128 2.171003 CCAAAATCTGGTTCTGACCCC 58.829 52.381 0.00 0.00 45.92 4.95
6788 8156 2.844348 TCCCCAGAACTCTAAATGACCC 59.156 50.000 0.00 0.00 0.00 4.46
6795 8163 4.286291 GGTTTCTCTTCCCCAGAACTCTAA 59.714 45.833 0.00 0.00 29.30 2.10
6813 8181 1.997606 CTGACCCGTTCGTATGGTTTC 59.002 52.381 0.00 0.00 30.97 2.78
6817 8185 1.636988 GTTCTGACCCGTTCGTATGG 58.363 55.000 0.00 0.00 0.00 2.74
6822 8190 0.246635 ATCTGGTTCTGACCCGTTCG 59.753 55.000 0.00 0.00 45.92 3.95
6937 8324 9.229784 ACACTAAAACGTGTCTATATACATTCG 57.770 33.333 0.00 0.00 44.32 3.34
6972 8359 9.314321 CCGTTCTACATATAAAGTGAAATGAGT 57.686 33.333 0.00 0.00 0.00 3.41
6996 8429 6.602406 ACTGGGCTATAACATATACTACTCCG 59.398 42.308 0.00 0.00 0.00 4.63
7018 8451 1.327460 CGGAGACACAACACAACACTG 59.673 52.381 0.00 0.00 0.00 3.66
7029 8462 1.066430 GCCAATAGAACCGGAGACACA 60.066 52.381 9.46 0.00 0.00 3.72
7030 8463 1.207329 AGCCAATAGAACCGGAGACAC 59.793 52.381 9.46 0.00 0.00 3.67
7031 8464 1.568504 AGCCAATAGAACCGGAGACA 58.431 50.000 9.46 0.00 0.00 3.41
7032 8465 2.693267 AAGCCAATAGAACCGGAGAC 57.307 50.000 9.46 0.00 0.00 3.36
7068 8504 1.016627 CCAACCGGATATGTGTGCAG 58.983 55.000 9.46 0.00 0.00 4.41
7118 8554 5.124617 ACGGTCAATTGCAAAACCAAAATTT 59.875 32.000 21.77 1.03 0.00 1.82
7119 8555 4.637977 ACGGTCAATTGCAAAACCAAAATT 59.362 33.333 21.77 1.66 0.00 1.82
7120 8556 4.195416 ACGGTCAATTGCAAAACCAAAAT 58.805 34.783 21.77 7.57 0.00 1.82
7165 8601 0.178873 GTCCCCTAGCCATCCCCATA 60.179 60.000 0.00 0.00 0.00 2.74
7178 8614 6.139679 TCTAAATTCAGTCAATTGTCCCCT 57.860 37.500 5.13 0.00 34.69 4.79
7210 8646 2.949447 ACAGCTGGGAACAATTCAACT 58.051 42.857 19.93 0.00 42.06 3.16
7211 8647 3.383761 CAACAGCTGGGAACAATTCAAC 58.616 45.455 19.93 0.00 42.06 3.18
7212 8648 2.364970 CCAACAGCTGGGAACAATTCAA 59.635 45.455 19.93 0.00 42.17 2.69
7214 8650 2.238521 TCCAACAGCTGGGAACAATTC 58.761 47.619 19.93 0.00 46.44 2.17
7215 8651 2.380064 TCCAACAGCTGGGAACAATT 57.620 45.000 19.93 0.00 46.44 2.32
7228 8665 2.235016 CGGTTCCTTTTCCATCCAACA 58.765 47.619 0.00 0.00 0.00 3.33
7233 8670 3.053831 TCTGACGGTTCCTTTTCCATC 57.946 47.619 0.00 0.00 0.00 3.51
7243 8680 7.036220 TCAAAAGATAGAAGATCTGACGGTTC 58.964 38.462 0.00 0.00 0.00 3.62
7264 8702 7.040478 AGGAAGACGATGAACAATGATTTCAAA 60.040 33.333 0.00 0.00 36.57 2.69
7265 8703 6.430925 AGGAAGACGATGAACAATGATTTCAA 59.569 34.615 0.00 0.00 36.57 2.69
7266 8704 5.939883 AGGAAGACGATGAACAATGATTTCA 59.060 36.000 0.00 0.00 37.38 2.69
7300 8738 2.038269 GCGGGCGGTTCAGATCAAA 61.038 57.895 0.00 0.00 0.00 2.69
7336 8774 2.409055 CGCAGGCAGCATAGGCAAA 61.409 57.895 0.67 0.00 46.13 3.68
7337 8775 2.825387 CGCAGGCAGCATAGGCAA 60.825 61.111 0.67 0.00 46.13 4.52
7355 8793 3.197790 CACGGGAGCGCCATCAAG 61.198 66.667 9.31 0.00 35.15 3.02
7356 8794 3.700970 TCACGGGAGCGCCATCAA 61.701 61.111 9.31 0.00 35.15 2.57
7359 8797 4.457496 CTGTCACGGGAGCGCCAT 62.457 66.667 9.31 0.00 35.15 4.40
7363 8801 4.803426 GAGGCTGTCACGGGAGCG 62.803 72.222 0.00 0.00 35.95 5.03
7394 8832 1.658114 CAACACGACAGTCGAGGGA 59.342 57.895 29.53 0.00 43.74 4.20
7400 8838 2.939022 GGCAGCAACACGACAGTC 59.061 61.111 0.00 0.00 0.00 3.51
7402 8840 4.374702 GCGGCAGCAACACGACAG 62.375 66.667 3.18 0.00 44.35 3.51
7417 8855 1.107538 TTAGAGGGATGGTCGAGGCG 61.108 60.000 0.00 0.00 0.00 5.52
7421 8859 2.022195 CGAAGTTAGAGGGATGGTCGA 58.978 52.381 0.00 0.00 0.00 4.20
7431 8869 2.108168 TGGTCATCCCCGAAGTTAGAG 58.892 52.381 0.00 0.00 0.00 2.43
7437 8875 3.004752 AGAAATTGGTCATCCCCGAAG 57.995 47.619 0.00 0.00 0.00 3.79
7438 8876 3.449746 AAGAAATTGGTCATCCCCGAA 57.550 42.857 0.00 0.00 0.00 4.30
7439 8877 4.412199 AGATAAGAAATTGGTCATCCCCGA 59.588 41.667 0.00 0.00 0.00 5.14
7443 8881 6.122277 TCACCAGATAAGAAATTGGTCATCC 58.878 40.000 0.00 0.00 41.81 3.51
7449 8887 4.337555 CAGGCTCACCAGATAAGAAATTGG 59.662 45.833 0.00 0.00 39.06 3.16
7451 8889 3.950395 GCAGGCTCACCAGATAAGAAATT 59.050 43.478 0.00 0.00 39.06 1.82
7452 8890 3.054139 TGCAGGCTCACCAGATAAGAAAT 60.054 43.478 0.00 0.00 39.06 2.17
7468 8906 2.267324 GGAGAGAGGTGTGCAGGC 59.733 66.667 0.00 0.00 0.00 4.85
7481 8919 0.253868 TGAGGGAGAGAGGAGGGAGA 60.254 60.000 0.00 0.00 0.00 3.71
7482 8920 0.106217 GTGAGGGAGAGAGGAGGGAG 60.106 65.000 0.00 0.00 0.00 4.30
7483 8921 1.585651 GGTGAGGGAGAGAGGAGGGA 61.586 65.000 0.00 0.00 0.00 4.20
7484 8922 1.075600 GGTGAGGGAGAGAGGAGGG 60.076 68.421 0.00 0.00 0.00 4.30
7485 8923 1.075600 GGGTGAGGGAGAGAGGAGG 60.076 68.421 0.00 0.00 0.00 4.30
7486 8924 1.075600 GGGGTGAGGGAGAGAGGAG 60.076 68.421 0.00 0.00 0.00 3.69
7487 8925 2.637640 GGGGGTGAGGGAGAGAGGA 61.638 68.421 0.00 0.00 0.00 3.71
7488 8926 2.041405 GGGGGTGAGGGAGAGAGG 60.041 72.222 0.00 0.00 0.00 3.69
7489 8927 1.687493 GTGGGGGTGAGGGAGAGAG 60.687 68.421 0.00 0.00 0.00 3.20
7490 8928 2.450243 GTGGGGGTGAGGGAGAGA 59.550 66.667 0.00 0.00 0.00 3.10
7491 8929 2.122729 TGTGGGGGTGAGGGAGAG 59.877 66.667 0.00 0.00 0.00 3.20
7492 8930 2.203938 GTGTGGGGGTGAGGGAGA 60.204 66.667 0.00 0.00 0.00 3.71
7498 8936 4.845307 TGGGGTGTGTGGGGGTGA 62.845 66.667 0.00 0.00 0.00 4.02
7504 8942 4.771114 TTATCTATCTTGGGGTGTGTGG 57.229 45.455 0.00 0.00 0.00 4.17
7506 8944 4.104738 CCCATTATCTATCTTGGGGTGTGT 59.895 45.833 0.00 0.00 44.29 3.72
7528 8966 2.666596 CTTAGGATGGCAGGCGACCC 62.667 65.000 0.00 0.00 0.00 4.46
7575 9013 4.936685 AGCCCTCTTGGTCTATCTTTTT 57.063 40.909 0.00 0.00 36.04 1.94
7576 9014 4.936685 AAGCCCTCTTGGTCTATCTTTT 57.063 40.909 0.00 0.00 36.04 2.27
7577 9015 4.936685 AAAGCCCTCTTGGTCTATCTTT 57.063 40.909 0.00 0.00 36.04 2.52
7578 9016 4.538089 AGAAAAGCCCTCTTGGTCTATCTT 59.462 41.667 0.00 0.00 36.04 2.40
7579 9017 4.080638 CAGAAAAGCCCTCTTGGTCTATCT 60.081 45.833 0.00 0.00 36.04 1.98
7580 9018 4.195416 CAGAAAAGCCCTCTTGGTCTATC 58.805 47.826 0.00 0.00 36.04 2.08
7581 9019 3.054065 CCAGAAAAGCCCTCTTGGTCTAT 60.054 47.826 0.00 0.00 36.04 1.98
7582 9020 2.305927 CCAGAAAAGCCCTCTTGGTCTA 59.694 50.000 0.00 0.00 36.04 2.59
7583 9021 1.074566 CCAGAAAAGCCCTCTTGGTCT 59.925 52.381 0.00 0.00 36.04 3.85
7584 9022 1.202940 ACCAGAAAAGCCCTCTTGGTC 60.203 52.381 0.00 0.00 36.04 4.02
7585 9023 0.853530 ACCAGAAAAGCCCTCTTGGT 59.146 50.000 0.00 0.00 36.04 3.67
7586 9024 1.202927 TCACCAGAAAAGCCCTCTTGG 60.203 52.381 0.00 0.00 31.78 3.61
7587 9025 2.276732 TCACCAGAAAAGCCCTCTTG 57.723 50.000 0.00 0.00 31.78 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.