Multiple sequence alignment - TraesCS3B01G145500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G145500 chr3B 100.000 6548 0 0 1 6548 133824584 133818037 0.000000e+00 12092.0
1 TraesCS3B01G145500 chr3B 87.459 303 16 10 5227 5526 118791988 118792271 4.890000e-86 329.0
2 TraesCS3B01G145500 chr3B 94.388 196 6 1 5035 5225 118791694 118791889 4.960000e-76 296.0
3 TraesCS3B01G145500 chr3B 88.614 202 10 3 2398 2587 118791265 118791465 3.950000e-57 233.0
4 TraesCS3B01G145500 chr3B 92.248 129 3 3 3393 3514 118791464 118791592 6.750000e-40 176.0
5 TraesCS3B01G145500 chr3D 93.981 2376 80 20 3515 5867 84912842 84910507 0.000000e+00 3537.0
6 TraesCS3B01G145500 chr3D 91.536 1843 102 27 2 1813 84916225 84914406 0.000000e+00 2490.0
7 TraesCS3B01G145500 chr3D 91.888 678 46 8 2835 3506 84913858 84913184 0.000000e+00 939.0
8 TraesCS3B01G145500 chr3D 94.819 579 22 4 2213 2785 84914416 84913840 0.000000e+00 896.0
9 TraesCS3B01G145500 chr3D 89.182 379 16 10 1835 2212 136481573 136481927 3.600000e-122 449.0
10 TraesCS3B01G145500 chr3D 86.598 388 46 6 1821 2205 602043576 602043192 2.180000e-114 424.0
11 TraesCS3B01G145500 chr3D 85.079 382 42 10 1835 2205 416388919 416388542 6.200000e-100 375.0
12 TraesCS3B01G145500 chr3D 91.237 194 12 2 6360 6548 84909488 84909295 6.510000e-65 259.0
13 TraesCS3B01G145500 chr3D 88.649 185 21 0 6094 6278 85236414 85236598 6.610000e-55 226.0
14 TraesCS3B01G145500 chr3D 91.971 137 11 0 6098 6234 84909762 84909626 6.700000e-45 193.0
15 TraesCS3B01G145500 chr3D 96.875 32 1 0 5966 5997 84910483 84910452 3.000000e-03 54.7
16 TraesCS3B01G145500 chr3A 94.444 1908 84 16 4146 6049 101895143 101893254 0.000000e+00 2916.0
17 TraesCS3B01G145500 chr3A 90.602 1862 106 28 2 1813 101899370 101897528 0.000000e+00 2405.0
18 TraesCS3B01G145500 chr3A 95.827 671 14 6 2802 3459 101896996 101896327 0.000000e+00 1072.0
19 TraesCS3B01G145500 chr3A 95.755 636 20 4 3515 4148 101895933 101895303 0.000000e+00 1018.0
20 TraesCS3B01G145500 chr3A 93.896 557 15 8 2213 2762 101897539 101896995 0.000000e+00 822.0
21 TraesCS3B01G145500 chr3A 82.683 410 30 21 6176 6548 101892789 101892384 6.330000e-85 326.0
22 TraesCS3B01G145500 chr4B 84.638 1022 120 18 4162 5162 621094383 621095388 0.000000e+00 983.0
23 TraesCS3B01G145500 chr4B 80.776 541 79 15 1282 1806 621092252 621092783 3.680000e-107 399.0
24 TraesCS3B01G145500 chr4B 83.133 415 57 8 3531 3940 621093957 621094363 3.730000e-97 366.0
25 TraesCS3B01G145500 chr4B 87.347 245 30 1 2988 3231 621093113 621093357 5.000000e-71 279.0
26 TraesCS3B01G145500 chr4B 88.263 213 24 1 3280 3491 621093434 621093646 3.030000e-63 254.0
27 TraesCS3B01G145500 chr4B 78.289 304 50 12 996 1285 621075696 621075997 1.450000e-41 182.0
28 TraesCS3B01G145500 chr5A 83.466 1004 111 26 4178 5161 666871122 666872090 0.000000e+00 883.0
29 TraesCS3B01G145500 chr5A 82.552 533 64 15 2988 3491 666869594 666870126 6.030000e-120 442.0
30 TraesCS3B01G145500 chr5A 81.550 542 75 17 1282 1808 666868723 666869254 2.180000e-114 424.0
31 TraesCS3B01G145500 chr5A 84.086 421 50 9 3515 3926 666870659 666871071 2.210000e-104 390.0
32 TraesCS3B01G145500 chr5A 87.097 217 25 2 2265 2478 666869311 666869527 6.560000e-60 243.0
33 TraesCS3B01G145500 chr4D 87.193 734 72 14 4178 4910 486620285 486620997 0.000000e+00 815.0
34 TraesCS3B01G145500 chr4D 83.241 543 67 17 1281 1806 486618162 486618697 1.650000e-130 477.0
35 TraesCS3B01G145500 chr4D 82.804 535 61 18 2988 3491 486619026 486619560 3.600000e-122 449.0
36 TraesCS3B01G145500 chr4D 83.371 439 52 16 3515 3940 486619818 486620248 2.860000e-103 387.0
37 TraesCS3B01G145500 chr4D 78.808 302 49 10 996 1285 486617159 486617457 8.670000e-44 189.0
38 TraesCS3B01G145500 chr4A 91.755 376 27 3 1835 2207 725744339 725743965 2.710000e-143 520.0
39 TraesCS3B01G145500 chr4A 91.362 301 19 3 1835 2135 725789106 725788813 7.910000e-109 405.0
40 TraesCS3B01G145500 chr6D 87.566 378 44 2 1835 2212 375290520 375290146 1.010000e-117 435.0
41 TraesCS3B01G145500 chr6A 89.368 348 20 4 1835 2165 97594847 97594500 7.850000e-114 422.0
42 TraesCS3B01G145500 chr5D 86.968 376 42 6 1835 2205 339976898 339976525 3.650000e-112 416.0
43 TraesCS3B01G145500 chr5B 86.863 373 44 5 1835 2205 491099172 491098803 4.720000e-111 412.0
44 TraesCS3B01G145500 chr2B 86.000 250 31 3 1963 2212 134488336 134488581 1.400000e-66 265.0
45 TraesCS3B01G145500 chr7B 74.847 326 63 13 3536 3857 731352862 731353172 5.330000e-26 130.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G145500 chr3B 133818037 133824584 6547 True 12092.000000 12092 100.000000 1 6548 1 chr3B.!!$R1 6547
1 TraesCS3B01G145500 chr3B 118791265 118792271 1006 False 258.500000 329 90.677250 2398 5526 4 chr3B.!!$F1 3128
2 TraesCS3B01G145500 chr3D 84909295 84916225 6930 True 1195.528571 3537 93.186714 2 6548 7 chr3D.!!$R3 6546
3 TraesCS3B01G145500 chr3A 101892384 101899370 6986 True 1426.500000 2916 92.201167 2 6548 6 chr3A.!!$R1 6546
4 TraesCS3B01G145500 chr4B 621092252 621095388 3136 False 456.200000 983 84.831400 1282 5162 5 chr4B.!!$F2 3880
5 TraesCS3B01G145500 chr5A 666868723 666872090 3367 False 476.400000 883 83.750200 1282 5161 5 chr5A.!!$F1 3879
6 TraesCS3B01G145500 chr4D 486617159 486620997 3838 False 463.400000 815 83.083400 996 4910 5 chr4D.!!$F1 3914

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
814 840 0.034896 TCCCGTCCTTTCTCTTGTGC 59.965 55.0 0.00 0.00 0.00 4.57 F
1818 2621 0.179200 GGTATGCCACGTGCGAAAAG 60.179 55.0 10.91 0.00 45.60 2.27 F
2186 2989 0.111446 TGAAAAACGGGCTCCATGGA 59.889 50.0 15.27 15.27 0.00 3.41 F
3680 5098 0.318699 TCTGCGTCATATGCTACGGC 60.319 55.0 16.07 10.20 39.46 5.68 F
5208 6849 0.041312 CAGTACCAACAAGTGCACGC 60.041 55.0 12.01 0.00 0.00 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2167 2970 0.111446 TCCATGGAGCCCGTTTTTCA 59.889 50.000 11.44 0.0 0.00 2.69 R
3769 5188 0.319986 TGCTCGCACGGTTTGACATA 60.320 50.000 0.00 0.0 0.00 2.29 R
3879 5300 3.255888 GTGGACAACAAGAAGGGGAAATC 59.744 47.826 0.00 0.0 0.00 2.17 R
5498 7244 0.034896 AACCTGCACGGAGTAGTTGG 59.965 55.000 8.91 0.0 41.61 3.77 R
6216 8792 0.035458 GGATGTAGAGGGCCAATCGG 59.965 60.000 6.18 0.0 0.00 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
132 145 4.475444 CCCTCCCCTCTACCCGCA 62.475 72.222 0.00 0.00 0.00 5.69
182 195 2.532256 GCGCGAGATGCATGCTTCT 61.532 57.895 30.14 30.14 46.97 2.85
193 206 3.254024 ATGCTTCTCCCGTGCCGTT 62.254 57.895 0.00 0.00 0.00 4.44
239 252 3.210528 TTCACGCGGCGGGTTTTT 61.211 55.556 27.57 2.42 0.00 1.94
282 295 3.158676 CCCCGTTCCATTTGACCTTTTA 58.841 45.455 0.00 0.00 0.00 1.52
288 301 5.567534 CGTTCCATTTGACCTTTTATTGTCG 59.432 40.000 0.00 0.00 34.18 4.35
299 312 2.068837 TTATTGTCGGCGAGTTCGTT 57.931 45.000 11.20 0.00 42.22 3.85
300 313 1.342555 TATTGTCGGCGAGTTCGTTG 58.657 50.000 11.20 0.00 42.22 4.10
329 342 5.409214 CGTGGAGGACTAATTTCGGTAAAAA 59.591 40.000 0.00 0.00 0.00 1.94
419 432 0.766131 TCCTGGGTTTTAGTTGCCGA 59.234 50.000 0.00 0.00 0.00 5.54
523 545 3.379445 GGACGCGGAGAGGGTTCA 61.379 66.667 12.47 0.00 46.65 3.18
541 563 4.100529 GTTCAATTTGGATCTGCATGTCG 58.899 43.478 0.00 0.00 0.00 4.35
546 568 5.587388 ATTTGGATCTGCATGTCGATTTT 57.413 34.783 0.00 0.00 0.00 1.82
547 569 5.389859 TTTGGATCTGCATGTCGATTTTT 57.610 34.783 0.00 0.00 0.00 1.94
566 588 1.981256 TTCCAACTGCAGTTTCCCTC 58.019 50.000 29.23 0.00 35.83 4.30
582 604 2.453601 TCCCTCCCGGAAATACTCCTAT 59.546 50.000 0.73 0.00 42.85 2.57
583 605 3.664127 TCCCTCCCGGAAATACTCCTATA 59.336 47.826 0.73 0.00 42.85 1.31
584 606 4.296852 TCCCTCCCGGAAATACTCCTATAT 59.703 45.833 0.73 0.00 42.85 0.86
585 607 5.497269 TCCCTCCCGGAAATACTCCTATATA 59.503 44.000 0.73 0.00 42.85 0.86
586 608 5.834204 CCCTCCCGGAAATACTCCTATATAG 59.166 48.000 0.73 2.46 42.85 1.31
688 714 5.501574 CGTGTGTTTTTATGGCAAAGTTTGG 60.502 40.000 17.11 0.00 0.00 3.28
691 717 5.007234 GTGTTTTTATGGCAAAGTTTGGTCC 59.993 40.000 17.11 10.92 0.00 4.46
692 718 5.119694 GTTTTTATGGCAAAGTTTGGTCCA 58.880 37.500 17.11 15.87 0.00 4.02
693 719 5.559148 TTTTATGGCAAAGTTTGGTCCAT 57.441 34.783 23.17 23.17 37.33 3.41
694 720 6.672266 TTTTATGGCAAAGTTTGGTCCATA 57.328 33.333 21.68 21.68 35.81 2.74
698 724 2.497273 GGCAAAGTTTGGTCCATATGCT 59.503 45.455 17.11 0.00 33.29 3.79
704 730 7.416213 GCAAAGTTTGGTCCATATGCTAACATA 60.416 37.037 17.11 0.00 42.85 2.29
747 773 2.072298 CTGACTTGTAAGGTGAGCTGC 58.928 52.381 0.00 0.00 0.00 5.25
808 834 2.577593 CCCGTCCCGTCCTTTCTC 59.422 66.667 0.00 0.00 0.00 2.87
812 838 0.317479 CGTCCCGTCCTTTCTCTTGT 59.683 55.000 0.00 0.00 0.00 3.16
813 839 1.797025 GTCCCGTCCTTTCTCTTGTG 58.203 55.000 0.00 0.00 0.00 3.33
814 840 0.034896 TCCCGTCCTTTCTCTTGTGC 59.965 55.000 0.00 0.00 0.00 4.57
815 841 0.250295 CCCGTCCTTTCTCTTGTGCA 60.250 55.000 0.00 0.00 0.00 4.57
816 842 1.151668 CCGTCCTTTCTCTTGTGCAG 58.848 55.000 0.00 0.00 0.00 4.41
817 843 1.541233 CCGTCCTTTCTCTTGTGCAGT 60.541 52.381 0.00 0.00 0.00 4.40
834 866 3.393800 GCAGTATCCGTGCAATCAGTAT 58.606 45.455 0.00 0.00 40.86 2.12
835 867 4.556233 GCAGTATCCGTGCAATCAGTATA 58.444 43.478 0.00 0.00 40.86 1.47
836 868 4.623167 GCAGTATCCGTGCAATCAGTATAG 59.377 45.833 0.00 0.00 40.86 1.31
838 870 6.569801 GCAGTATCCGTGCAATCAGTATAGTA 60.570 42.308 0.00 0.00 40.86 1.82
936 969 6.096846 TCACGGTTTGATTCATCTCATCTCTA 59.903 38.462 0.00 0.00 0.00 2.43
954 987 9.705103 TCATCTCTATTTTCCATGGAAATTCTT 57.295 29.630 34.67 22.78 42.71 2.52
989 1022 5.248020 ACTGATTCTCTCAAGGTTCTGTGAT 59.752 40.000 0.00 0.00 32.14 3.06
1045 1078 4.867599 GGGTCGTCGCCGATGTCC 62.868 72.222 13.23 13.23 46.30 4.02
1155 1214 3.832237 CTGCAGCCCAGTCGTTGGT 62.832 63.158 0.00 0.00 46.25 3.67
1242 1318 6.094603 CCATGTATATATTCTTTGCCTCTGCC 59.905 42.308 0.00 0.00 36.33 4.85
1325 2110 9.871238 CTCTTAATTACCACAGTACAATACAGT 57.129 33.333 0.00 0.00 0.00 3.55
1335 2120 8.869897 CCACAGTACAATACAGTACATAAGTTG 58.130 37.037 6.97 0.00 45.25 3.16
1363 2151 3.745975 CCACGCAATCTCTAACAAGAACA 59.254 43.478 0.00 0.00 0.00 3.18
1495 2283 5.129815 TGGAGTTGCCGAACCTACTATTATT 59.870 40.000 0.00 0.00 40.66 1.40
1504 2292 9.741647 GCCGAACCTACTATTATTATGTATACC 57.258 37.037 0.00 0.00 0.00 2.73
1524 2312 5.091261 ACCTATCTCTACAAGTTTGCCAG 57.909 43.478 0.00 0.00 0.00 4.85
1635 2438 4.808558 TCGGTACCGTATACATAAATGCC 58.191 43.478 32.16 0.00 40.74 4.40
1677 2480 1.145738 ACAGGGTCTGCATTTGGACTT 59.854 47.619 4.09 0.00 34.37 3.01
1796 2599 3.009473 TCCTCTTCCTGCAACAAGCTATT 59.991 43.478 0.00 0.00 45.94 1.73
1806 2609 4.338118 TGCAACAAGCTATTAAGGTATGCC 59.662 41.667 0.00 0.00 45.94 4.40
1807 2610 4.338118 GCAACAAGCTATTAAGGTATGCCA 59.662 41.667 1.54 0.00 41.15 4.92
1808 2611 5.733373 GCAACAAGCTATTAAGGTATGCCAC 60.733 44.000 1.54 0.00 41.15 5.01
1809 2612 4.127171 ACAAGCTATTAAGGTATGCCACG 58.873 43.478 1.54 0.00 37.19 4.94
1810 2613 4.127171 CAAGCTATTAAGGTATGCCACGT 58.873 43.478 1.54 0.00 37.19 4.49
1811 2614 3.728845 AGCTATTAAGGTATGCCACGTG 58.271 45.455 9.08 9.08 37.19 4.49
1812 2615 2.223377 GCTATTAAGGTATGCCACGTGC 59.777 50.000 10.91 6.53 41.77 5.34
1813 2616 1.295792 ATTAAGGTATGCCACGTGCG 58.704 50.000 10.91 4.74 45.60 5.34
1814 2617 0.246910 TTAAGGTATGCCACGTGCGA 59.753 50.000 10.91 0.00 45.60 5.10
1815 2618 0.246910 TAAGGTATGCCACGTGCGAA 59.753 50.000 10.91 0.00 45.60 4.70
1816 2619 0.604243 AAGGTATGCCACGTGCGAAA 60.604 50.000 10.91 0.00 45.60 3.46
1817 2620 0.604243 AGGTATGCCACGTGCGAAAA 60.604 50.000 10.91 0.00 45.60 2.29
1818 2621 0.179200 GGTATGCCACGTGCGAAAAG 60.179 55.000 10.91 0.00 45.60 2.27
1819 2622 0.515564 GTATGCCACGTGCGAAAAGT 59.484 50.000 10.91 0.00 45.60 2.66
1820 2623 0.515127 TATGCCACGTGCGAAAAGTG 59.485 50.000 10.91 0.00 45.60 3.16
1821 2624 2.725815 GCCACGTGCGAAAAGTGC 60.726 61.111 10.91 1.21 36.99 4.40
1822 2625 2.712539 CCACGTGCGAAAAGTGCA 59.287 55.556 10.91 0.00 36.99 4.57
1823 2626 1.063327 CCACGTGCGAAAAGTGCAA 59.937 52.632 10.91 0.00 45.23 4.08
1824 2627 0.929824 CCACGTGCGAAAAGTGCAAG 60.930 55.000 10.91 0.00 45.23 4.01
1825 2628 1.298339 ACGTGCGAAAAGTGCAAGC 60.298 52.632 0.00 0.00 45.23 4.01
1826 2629 1.298264 CGTGCGAAAAGTGCAAGCA 60.298 52.632 0.00 0.00 45.23 3.91
1827 2630 1.264141 CGTGCGAAAAGTGCAAGCAG 61.264 55.000 0.00 0.00 45.23 4.24
1828 2631 1.299316 TGCGAAAAGTGCAAGCAGC 60.299 52.632 0.00 0.00 39.87 5.25
1838 2641 2.960170 CAAGCAGCACCCAAGCTC 59.040 61.111 0.00 0.00 44.54 4.09
1839 2642 1.602888 CAAGCAGCACCCAAGCTCT 60.603 57.895 0.00 0.00 44.54 4.09
1840 2643 1.152368 AAGCAGCACCCAAGCTCTT 59.848 52.632 0.00 0.00 44.54 2.85
1841 2644 0.468771 AAGCAGCACCCAAGCTCTTT 60.469 50.000 0.00 0.00 44.54 2.52
1842 2645 0.401738 AGCAGCACCCAAGCTCTTTA 59.598 50.000 0.00 0.00 44.54 1.85
1843 2646 1.005215 AGCAGCACCCAAGCTCTTTAT 59.995 47.619 0.00 0.00 44.54 1.40
1844 2647 1.821136 GCAGCACCCAAGCTCTTTATT 59.179 47.619 0.00 0.00 44.54 1.40
1845 2648 2.232208 GCAGCACCCAAGCTCTTTATTT 59.768 45.455 0.00 0.00 44.54 1.40
1846 2649 3.306294 GCAGCACCCAAGCTCTTTATTTT 60.306 43.478 0.00 0.00 44.54 1.82
1847 2650 4.800582 GCAGCACCCAAGCTCTTTATTTTT 60.801 41.667 0.00 0.00 44.54 1.94
1848 2651 4.925646 CAGCACCCAAGCTCTTTATTTTTC 59.074 41.667 0.00 0.00 44.54 2.29
1849 2652 4.835056 AGCACCCAAGCTCTTTATTTTTCT 59.165 37.500 0.00 0.00 42.18 2.52
1850 2653 5.305386 AGCACCCAAGCTCTTTATTTTTCTT 59.695 36.000 0.00 0.00 42.18 2.52
1851 2654 5.991606 GCACCCAAGCTCTTTATTTTTCTTT 59.008 36.000 0.00 0.00 0.00 2.52
1852 2655 6.146184 GCACCCAAGCTCTTTATTTTTCTTTC 59.854 38.462 0.00 0.00 0.00 2.62
1853 2656 7.209475 CACCCAAGCTCTTTATTTTTCTTTCA 58.791 34.615 0.00 0.00 0.00 2.69
1854 2657 7.710475 CACCCAAGCTCTTTATTTTTCTTTCAA 59.290 33.333 0.00 0.00 0.00 2.69
1855 2658 8.432013 ACCCAAGCTCTTTATTTTTCTTTCAAT 58.568 29.630 0.00 0.00 0.00 2.57
1856 2659 8.715088 CCCAAGCTCTTTATTTTTCTTTCAATG 58.285 33.333 0.00 0.00 0.00 2.82
1857 2660 9.480053 CCAAGCTCTTTATTTTTCTTTCAATGA 57.520 29.630 0.00 0.00 0.00 2.57
1965 2768 5.794687 AACATATGTGTTCATACGTGGTG 57.205 39.130 9.63 0.00 45.14 4.17
1966 2769 4.827692 ACATATGTGTTCATACGTGGTGT 58.172 39.130 7.78 0.00 39.03 4.16
1967 2770 5.968254 ACATATGTGTTCATACGTGGTGTA 58.032 37.500 7.78 0.00 39.03 2.90
1968 2771 5.808540 ACATATGTGTTCATACGTGGTGTAC 59.191 40.000 7.78 1.94 39.03 2.90
1969 2772 3.729862 TGTGTTCATACGTGGTGTACA 57.270 42.857 0.00 4.74 35.44 2.90
1970 2773 3.382855 TGTGTTCATACGTGGTGTACAC 58.617 45.455 24.92 24.92 43.69 2.90
2001 2804 8.451908 AGACAAATACATGGAGTAAAATAGGC 57.548 34.615 0.00 0.00 36.05 3.93
2002 2805 7.502561 AGACAAATACATGGAGTAAAATAGGCC 59.497 37.037 0.00 0.00 36.05 5.19
2003 2806 7.122715 ACAAATACATGGAGTAAAATAGGCCA 58.877 34.615 5.01 0.00 36.05 5.36
2004 2807 7.784550 ACAAATACATGGAGTAAAATAGGCCAT 59.215 33.333 5.01 0.00 39.81 4.40
2005 2808 8.641541 CAAATACATGGAGTAAAATAGGCCATT 58.358 33.333 5.01 0.00 37.24 3.16
2006 2809 8.782137 AATACATGGAGTAAAATAGGCCATTT 57.218 30.769 5.01 6.42 37.24 2.32
2007 2810 6.715347 ACATGGAGTAAAATAGGCCATTTC 57.285 37.500 5.01 0.00 37.24 2.17
2008 2811 5.598417 ACATGGAGTAAAATAGGCCATTTCC 59.402 40.000 5.01 7.36 37.24 3.13
2009 2812 5.466127 TGGAGTAAAATAGGCCATTTCCT 57.534 39.130 5.01 8.63 35.74 3.36
2010 2813 5.837829 TGGAGTAAAATAGGCCATTTCCTT 58.162 37.500 5.01 0.00 35.74 3.36
2011 2814 6.260663 TGGAGTAAAATAGGCCATTTCCTTT 58.739 36.000 5.01 0.00 35.74 3.11
2012 2815 6.728632 TGGAGTAAAATAGGCCATTTCCTTTT 59.271 34.615 5.01 4.03 35.74 2.27
2013 2816 7.236640 TGGAGTAAAATAGGCCATTTCCTTTTT 59.763 33.333 5.01 2.81 38.46 1.94
2014 2817 7.549134 GGAGTAAAATAGGCCATTTCCTTTTTG 59.451 37.037 5.01 0.00 37.42 2.44
2015 2818 7.973402 AGTAAAATAGGCCATTTCCTTTTTGT 58.027 30.769 5.01 0.00 37.42 2.83
2016 2819 8.436778 AGTAAAATAGGCCATTTCCTTTTTGTT 58.563 29.630 5.01 0.00 37.42 2.83
2017 2820 9.062524 GTAAAATAGGCCATTTCCTTTTTGTTT 57.937 29.630 5.01 0.00 37.42 2.83
2018 2821 8.532186 AAAATAGGCCATTTCCTTTTTGTTTT 57.468 26.923 5.01 0.00 37.42 2.43
2019 2822 8.532186 AAATAGGCCATTTCCTTTTTGTTTTT 57.468 26.923 5.01 0.00 36.48 1.94
2020 2823 5.833406 AGGCCATTTCCTTTTTGTTTTTG 57.167 34.783 5.01 0.00 30.82 2.44
2021 2824 4.644234 AGGCCATTTCCTTTTTGTTTTTGG 59.356 37.500 5.01 0.00 30.82 3.28
2022 2825 4.202101 GGCCATTTCCTTTTTGTTTTTGGG 60.202 41.667 0.00 0.00 0.00 4.12
2023 2826 4.642437 GCCATTTCCTTTTTGTTTTTGGGA 59.358 37.500 0.00 0.00 0.00 4.37
2024 2827 5.449862 GCCATTTCCTTTTTGTTTTTGGGAC 60.450 40.000 0.00 0.00 0.00 4.46
2025 2828 5.885352 CCATTTCCTTTTTGTTTTTGGGACT 59.115 36.000 0.00 0.00 0.00 3.85
2026 2829 6.183360 CCATTTCCTTTTTGTTTTTGGGACTG 60.183 38.462 0.00 0.00 0.00 3.51
2027 2830 4.479786 TCCTTTTTGTTTTTGGGACTGG 57.520 40.909 0.00 0.00 0.00 4.00
2028 2831 3.841255 TCCTTTTTGTTTTTGGGACTGGT 59.159 39.130 0.00 0.00 0.00 4.00
2029 2832 5.024118 TCCTTTTTGTTTTTGGGACTGGTA 58.976 37.500 0.00 0.00 0.00 3.25
2030 2833 5.663556 TCCTTTTTGTTTTTGGGACTGGTAT 59.336 36.000 0.00 0.00 0.00 2.73
2031 2834 6.157123 TCCTTTTTGTTTTTGGGACTGGTATT 59.843 34.615 0.00 0.00 0.00 1.89
2032 2835 6.826231 CCTTTTTGTTTTTGGGACTGGTATTT 59.174 34.615 0.00 0.00 0.00 1.40
2033 2836 7.201688 CCTTTTTGTTTTTGGGACTGGTATTTG 60.202 37.037 0.00 0.00 0.00 2.32
2034 2837 5.941555 TTGTTTTTGGGACTGGTATTTGT 57.058 34.783 0.00 0.00 0.00 2.83
2035 2838 5.523438 TGTTTTTGGGACTGGTATTTGTC 57.477 39.130 0.00 0.00 0.00 3.18
2036 2839 5.205056 TGTTTTTGGGACTGGTATTTGTCT 58.795 37.500 0.00 0.00 34.01 3.41
2037 2840 5.659079 TGTTTTTGGGACTGGTATTTGTCTT 59.341 36.000 0.00 0.00 34.01 3.01
2038 2841 6.155393 TGTTTTTGGGACTGGTATTTGTCTTT 59.845 34.615 0.00 0.00 34.01 2.52
2039 2842 6.800072 TTTTGGGACTGGTATTTGTCTTTT 57.200 33.333 0.00 0.00 34.01 2.27
2040 2843 6.800072 TTTGGGACTGGTATTTGTCTTTTT 57.200 33.333 0.00 0.00 34.01 1.94
2102 2905 9.448438 ACTTTATACATAGTTGAAGAACATGCA 57.552 29.630 0.00 0.00 34.17 3.96
2105 2908 4.990257 ACATAGTTGAAGAACATGCATGC 58.010 39.130 26.53 11.82 34.17 4.06
2106 2909 2.624316 AGTTGAAGAACATGCATGCG 57.376 45.000 26.53 4.36 34.17 4.73
2107 2910 1.881973 AGTTGAAGAACATGCATGCGT 59.118 42.857 26.53 14.83 34.17 5.24
2108 2911 3.073678 AGTTGAAGAACATGCATGCGTA 58.926 40.909 26.53 4.70 34.17 4.42
2109 2912 3.691118 AGTTGAAGAACATGCATGCGTAT 59.309 39.130 26.53 9.41 34.17 3.06
2110 2913 4.156556 AGTTGAAGAACATGCATGCGTATT 59.843 37.500 26.53 17.35 34.17 1.89
2111 2914 4.700268 TGAAGAACATGCATGCGTATTT 57.300 36.364 26.53 12.75 0.00 1.40
2112 2915 4.413969 TGAAGAACATGCATGCGTATTTG 58.586 39.130 26.53 7.41 0.00 2.32
2113 2916 2.801063 AGAACATGCATGCGTATTTGC 58.199 42.857 26.53 4.54 39.33 3.68
2127 2930 6.775088 TGCGTATTTGCAAAATTTGTTTTGA 58.225 28.000 17.19 0.00 43.02 2.69
2128 2931 6.684555 TGCGTATTTGCAAAATTTGTTTTGAC 59.315 30.769 17.19 8.65 43.02 3.18
2129 2932 6.684555 GCGTATTTGCAAAATTTGTTTTGACA 59.315 30.769 17.19 10.60 42.79 3.58
2130 2933 7.375544 GCGTATTTGCAAAATTTGTTTTGACAT 59.624 29.630 17.19 0.00 42.79 3.06
2131 2934 9.219497 CGTATTTGCAAAATTTGTTTTGACATT 57.781 25.926 17.19 0.00 42.79 2.71
2183 2986 3.828875 TTTTTGAAAAACGGGCTCCAT 57.171 38.095 0.00 0.00 0.00 3.41
2184 2987 2.810439 TTTGAAAAACGGGCTCCATG 57.190 45.000 0.00 0.00 0.00 3.66
2185 2988 0.965439 TTGAAAAACGGGCTCCATGG 59.035 50.000 4.97 4.97 0.00 3.66
2186 2989 0.111446 TGAAAAACGGGCTCCATGGA 59.889 50.000 15.27 15.27 0.00 3.41
2187 2990 0.811281 GAAAAACGGGCTCCATGGAG 59.189 55.000 33.73 33.73 44.56 3.86
2201 3004 2.282180 GGAGCCCGTCCTTTGCAA 60.282 61.111 0.00 0.00 42.99 4.08
2202 3005 2.626780 GGAGCCCGTCCTTTGCAAC 61.627 63.158 0.00 0.00 42.99 4.17
2203 3006 2.966309 GAGCCCGTCCTTTGCAACG 61.966 63.158 0.00 0.00 38.58 4.10
2204 3007 4.700365 GCCCGTCCTTTGCAACGC 62.700 66.667 0.00 0.00 37.56 4.84
2205 3008 2.978010 CCCGTCCTTTGCAACGCT 60.978 61.111 0.00 0.00 37.56 5.07
2206 3009 2.252260 CCGTCCTTTGCAACGCTG 59.748 61.111 0.00 0.00 37.56 5.18
2494 3309 2.225727 CGTTTCCTGTTGCTTCCCTTAC 59.774 50.000 0.00 0.00 0.00 2.34
2527 3365 0.320073 TAGTGCAAACCGAACTCCCG 60.320 55.000 0.00 0.00 0.00 5.14
2585 3423 6.451064 TTTCAACTAGCGATGTGATAGAGA 57.549 37.500 0.00 0.00 38.92 3.10
2694 3532 4.630184 GCTCATTTGGGGTTGGATTAGGTA 60.630 45.833 0.00 0.00 0.00 3.08
2733 3571 3.644966 ATTAATCTGGGCTTCGGTTGA 57.355 42.857 0.00 0.00 0.00 3.18
2762 3600 7.562454 TTTTCTTTGGAACACTTGGTAGTAG 57.438 36.000 0.00 0.00 39.29 2.57
2763 3601 5.881923 TCTTTGGAACACTTGGTAGTAGT 57.118 39.130 0.00 0.00 39.29 2.73
2765 3603 4.612264 TTGGAACACTTGGTAGTAGTCC 57.388 45.455 0.00 0.00 39.29 3.85
2766 3604 3.578978 TGGAACACTTGGTAGTAGTCCA 58.421 45.455 0.00 0.00 41.08 4.02
2767 3605 3.968649 TGGAACACTTGGTAGTAGTCCAA 59.031 43.478 0.00 0.00 40.71 3.53
2768 3606 4.409574 TGGAACACTTGGTAGTAGTCCAAA 59.590 41.667 0.00 0.00 43.16 3.28
2769 3607 5.072600 TGGAACACTTGGTAGTAGTCCAAAT 59.927 40.000 0.00 0.00 43.16 2.32
2770 3608 6.270463 TGGAACACTTGGTAGTAGTCCAAATA 59.730 38.462 0.00 0.00 43.16 1.40
2771 3609 6.817140 GGAACACTTGGTAGTAGTCCAAATAG 59.183 42.308 0.00 0.00 43.16 1.73
2772 3610 6.295719 ACACTTGGTAGTAGTCCAAATAGG 57.704 41.667 0.00 0.00 43.16 2.57
2773 3611 5.189145 ACACTTGGTAGTAGTCCAAATAGGG 59.811 44.000 0.00 0.00 43.16 3.53
2774 3612 4.720273 ACTTGGTAGTAGTCCAAATAGGGG 59.280 45.833 0.00 0.00 43.16 4.79
2775 3613 3.043418 TGGTAGTAGTCCAAATAGGGGC 58.957 50.000 0.00 0.00 38.24 5.80
2776 3614 3.043418 GGTAGTAGTCCAAATAGGGGCA 58.957 50.000 0.00 0.00 38.24 5.36
2777 3615 3.071167 GGTAGTAGTCCAAATAGGGGCAG 59.929 52.174 0.00 0.00 38.24 4.85
2778 3616 2.846950 AGTAGTCCAAATAGGGGCAGT 58.153 47.619 0.00 0.00 38.24 4.40
2779 3617 3.190439 AGTAGTCCAAATAGGGGCAGTT 58.810 45.455 0.00 0.00 38.24 3.16
2780 3618 3.591977 AGTAGTCCAAATAGGGGCAGTTT 59.408 43.478 0.00 0.00 38.24 2.66
2781 3619 3.542969 AGTCCAAATAGGGGCAGTTTT 57.457 42.857 0.00 0.00 38.24 2.43
2782 3620 4.668138 AGTCCAAATAGGGGCAGTTTTA 57.332 40.909 0.00 0.00 38.24 1.52
2783 3621 5.005628 AGTCCAAATAGGGGCAGTTTTAA 57.994 39.130 0.00 0.00 38.24 1.52
2784 3622 5.399113 AGTCCAAATAGGGGCAGTTTTAAA 58.601 37.500 0.00 0.00 38.24 1.52
2785 3623 6.022958 AGTCCAAATAGGGGCAGTTTTAAAT 58.977 36.000 0.00 0.00 38.24 1.40
2786 3624 7.186268 AGTCCAAATAGGGGCAGTTTTAAATA 58.814 34.615 0.00 0.00 38.24 1.40
2787 3625 7.676468 AGTCCAAATAGGGGCAGTTTTAAATAA 59.324 33.333 0.00 0.00 38.24 1.40
2788 3626 8.315482 GTCCAAATAGGGGCAGTTTTAAATAAA 58.685 33.333 0.00 0.00 38.24 1.40
2789 3627 8.536175 TCCAAATAGGGGCAGTTTTAAATAAAG 58.464 33.333 0.00 0.00 38.24 1.85
2790 3628 8.318412 CCAAATAGGGGCAGTTTTAAATAAAGT 58.682 33.333 0.00 0.00 0.00 2.66
2791 3629 9.719355 CAAATAGGGGCAGTTTTAAATAAAGTT 57.281 29.630 0.00 0.00 0.00 2.66
2792 3630 9.719355 AAATAGGGGCAGTTTTAAATAAAGTTG 57.281 29.630 0.00 0.00 0.00 3.16
2793 3631 5.547465 AGGGGCAGTTTTAAATAAAGTTGC 58.453 37.500 11.88 11.88 36.49 4.17
2794 3632 5.071115 AGGGGCAGTTTTAAATAAAGTTGCA 59.929 36.000 17.63 0.00 37.72 4.08
2795 3633 5.760743 GGGGCAGTTTTAAATAAAGTTGCAA 59.239 36.000 17.63 0.00 37.72 4.08
2796 3634 6.261158 GGGGCAGTTTTAAATAAAGTTGCAAA 59.739 34.615 0.00 0.00 37.72 3.68
2797 3635 7.040755 GGGGCAGTTTTAAATAAAGTTGCAAAT 60.041 33.333 0.00 0.00 37.72 2.32
2798 3636 8.015087 GGGCAGTTTTAAATAAAGTTGCAAATC 58.985 33.333 0.00 0.00 37.72 2.17
2799 3637 8.555361 GGCAGTTTTAAATAAAGTTGCAAATCA 58.445 29.630 0.00 0.00 37.72 2.57
2800 3638 9.928236 GCAGTTTTAAATAAAGTTGCAAATCAA 57.072 25.926 0.00 0.00 36.85 2.57
2938 3776 8.567198 TCCAGAATATAATATATCACCAGGGG 57.433 38.462 0.00 0.00 0.00 4.79
3168 4006 1.406614 CCTGGGAGTCAATCTCACTGC 60.407 57.143 0.00 0.00 46.08 4.40
3315 4192 3.399305 AGGATTTGTTTTCTGTCCCTCCT 59.601 43.478 0.00 0.00 0.00 3.69
3502 4386 8.710551 CATCTAAGTCATTCTGTCAGATAATGC 58.289 37.037 2.68 2.86 31.98 3.56
3507 4391 4.571984 TCATTCTGTCAGATAATGCGTTGG 59.428 41.667 2.68 0.00 31.98 3.77
3529 4943 1.619704 GGGGGTTCCTTTTCTCATGGG 60.620 57.143 0.00 0.00 0.00 4.00
3680 5098 0.318699 TCTGCGTCATATGCTACGGC 60.319 55.000 16.07 10.20 39.46 5.68
3769 5188 2.310538 CTTCAAACTGCCAAAGAGGGT 58.689 47.619 0.00 0.00 38.09 4.34
3860 5279 5.475909 AGCAACATGAATGTGAGTCTTTCAT 59.524 36.000 0.00 9.38 45.49 2.57
3879 5300 9.952188 TCTTTCATTCTGTTATCGTACTATCTG 57.048 33.333 0.00 0.00 0.00 2.90
3977 5413 7.059448 TCTCTTGTTTTGCAATTTTGTGAAC 57.941 32.000 0.00 0.00 36.36 3.18
3979 5415 7.172190 TCTCTTGTTTTGCAATTTTGTGAACAA 59.828 29.630 17.67 17.67 36.36 2.83
3980 5416 7.814642 TCTTGTTTTGCAATTTTGTGAACAAT 58.185 26.923 18.54 0.00 36.62 2.71
3981 5417 8.939929 TCTTGTTTTGCAATTTTGTGAACAATA 58.060 25.926 18.54 11.89 36.62 1.90
3982 5418 9.719279 CTTGTTTTGCAATTTTGTGAACAATAT 57.281 25.926 18.54 0.00 36.62 1.28
4090 5527 7.712264 TGTTTCCATGCATTAGTTTCTTTTG 57.288 32.000 0.00 0.00 0.00 2.44
4158 5757 9.599322 GGAAATATCTTAAAGTGCATATTCGTG 57.401 33.333 0.00 0.00 0.00 4.35
4165 5764 1.135112 AGTGCATATTCGTGTCGCTGA 60.135 47.619 0.00 0.00 0.00 4.26
4380 5979 0.392461 TGTTGGAGCTATGCCGGTTC 60.392 55.000 1.90 0.00 0.00 3.62
4902 6522 3.243359 AGGTGTCCCACATGAACAAAT 57.757 42.857 0.00 0.00 35.86 2.32
4923 6550 1.961394 ACTGGTACGAGTTCAGCTTGA 59.039 47.619 4.48 0.00 32.82 3.02
4943 6570 7.040823 AGCTTGAGTTCTTGGATAAACTTTCTG 60.041 37.037 0.00 0.00 35.90 3.02
4945 6572 9.273016 CTTGAGTTCTTGGATAAACTTTCTGTA 57.727 33.333 0.00 0.00 35.90 2.74
5024 6654 7.431249 TGTTACTCTGAAACTCTTGTATCGTT 58.569 34.615 0.00 0.00 0.00 3.85
5046 6682 0.179051 GCAGGAGGAAGATGGCTCAG 60.179 60.000 0.00 0.00 0.00 3.35
5208 6849 0.041312 CAGTACCAACAAGTGCACGC 60.041 55.000 12.01 0.00 0.00 5.34
5254 6992 0.901124 ATGGCTCACAGTCTGACCTC 59.099 55.000 6.91 0.00 0.00 3.85
5351 7095 3.309961 ACTGCGCATATCAGTAGATGG 57.690 47.619 12.24 0.00 42.45 3.51
5385 7129 1.031571 TCATGGGCAGATTTCACGGC 61.032 55.000 0.00 0.00 0.00 5.68
5386 7130 2.114670 ATGGGCAGATTTCACGGCG 61.115 57.895 4.80 4.80 32.23 6.46
5387 7131 4.179579 GGGCAGATTTCACGGCGC 62.180 66.667 6.90 0.00 36.91 6.53
5488 7234 5.919141 GCATTTTGATGCCATCTATCTGAAC 59.081 40.000 6.21 0.00 41.47 3.18
5517 7264 0.034896 CCAACTACTCCGTGCAGGTT 59.965 55.000 5.57 0.00 41.99 3.50
5538 7285 2.095110 TCATTCAAATGCAGTTCAGCCG 60.095 45.455 0.00 0.00 36.36 5.52
5573 7320 1.831527 AAAAACGTCCCGAGGTCCA 59.168 52.632 0.00 0.00 0.00 4.02
5579 7326 2.203938 TCCCGAGGTCCAAGGCTT 60.204 61.111 0.00 0.00 0.00 4.35
5618 7365 6.758886 GTCAGAAGTGTAGATTATGGTGAAGG 59.241 42.308 0.00 0.00 0.00 3.46
5685 7432 0.596577 TGTAGCTAGCGCTTATCCGG 59.403 55.000 18.68 0.00 46.47 5.14
5849 7596 5.476945 CCTTTAGGTATTGCCAAGACTGTTT 59.523 40.000 1.83 0.00 40.61 2.83
5850 7597 5.957842 TTAGGTATTGCCAAGACTGTTTG 57.042 39.130 1.83 0.00 40.61 2.93
5852 7599 4.215109 AGGTATTGCCAAGACTGTTTGTT 58.785 39.130 1.83 0.00 40.61 2.83
5853 7600 4.037923 AGGTATTGCCAAGACTGTTTGTTG 59.962 41.667 1.83 0.00 40.61 3.33
5854 7601 2.292103 TTGCCAAGACTGTTTGTTGC 57.708 45.000 0.00 0.00 0.00 4.17
5855 7602 1.473258 TGCCAAGACTGTTTGTTGCT 58.527 45.000 0.00 0.00 0.00 3.91
5856 7603 1.405105 TGCCAAGACTGTTTGTTGCTC 59.595 47.619 0.00 0.00 0.00 4.26
5857 7604 1.269257 GCCAAGACTGTTTGTTGCTCC 60.269 52.381 0.00 0.00 0.00 4.70
5858 7605 1.002468 CCAAGACTGTTTGTTGCTCCG 60.002 52.381 0.00 0.00 0.00 4.63
5859 7606 1.670811 CAAGACTGTTTGTTGCTCCGT 59.329 47.619 0.00 0.00 0.00 4.69
5860 7607 1.299541 AGACTGTTTGTTGCTCCGTG 58.700 50.000 0.00 0.00 0.00 4.94
5861 7608 1.134521 AGACTGTTTGTTGCTCCGTGA 60.135 47.619 0.00 0.00 0.00 4.35
5862 7609 1.003866 GACTGTTTGTTGCTCCGTGAC 60.004 52.381 0.00 0.00 0.00 3.67
5867 7614 0.107410 TTGTTGCTCCGTGACCTGTT 60.107 50.000 0.00 0.00 0.00 3.16
5868 7615 0.813610 TGTTGCTCCGTGACCTGTTG 60.814 55.000 0.00 0.00 0.00 3.33
5908 7657 2.300437 GCTCTGTCTGAGTGTAAAGGGT 59.700 50.000 8.37 0.00 44.41 4.34
5959 7708 1.745115 GCGTGTCCTGGCTGCATTA 60.745 57.895 0.50 0.00 0.00 1.90
5963 7712 0.752743 TGTCCTGGCTGCATTATGGC 60.753 55.000 0.50 0.00 0.00 4.40
5964 7713 1.152694 TCCTGGCTGCATTATGGCC 60.153 57.895 6.96 6.96 45.45 5.36
5994 7743 4.286910 TCTTTTGCGTACTCACAATTTGC 58.713 39.130 0.00 0.00 0.00 3.68
5998 8235 3.138304 TGCGTACTCACAATTTGCTTCT 58.862 40.909 0.00 0.00 0.00 2.85
6008 8245 4.149922 CACAATTTGCTTCTACTCGAACGA 59.850 41.667 0.00 0.00 0.00 3.85
6009 8246 4.748102 ACAATTTGCTTCTACTCGAACGAA 59.252 37.500 0.00 0.00 0.00 3.85
6012 8249 5.917541 TTTGCTTCTACTCGAACGAAAAT 57.082 34.783 0.00 0.00 0.00 1.82
6014 8251 5.264060 TGCTTCTACTCGAACGAAAATTG 57.736 39.130 0.00 0.00 0.00 2.32
6017 8254 4.261578 TCTACTCGAACGAAAATTGGGT 57.738 40.909 0.00 0.00 0.00 4.51
6019 8256 1.796459 ACTCGAACGAAAATTGGGTCG 59.204 47.619 9.00 9.00 45.62 4.79
6027 8264 3.441222 ACGAAAATTGGGTCGGGTAATTC 59.559 43.478 10.19 0.00 41.56 2.17
6031 8268 4.310022 AATTGGGTCGGGTAATTCTTGA 57.690 40.909 0.00 0.00 0.00 3.02
6040 8277 3.127030 CGGGTAATTCTTGAAACCAGAGC 59.873 47.826 6.57 0.00 33.46 4.09
6049 8286 1.872952 TGAAACCAGAGCACACAATCG 59.127 47.619 0.00 0.00 0.00 3.34
6050 8287 2.143122 GAAACCAGAGCACACAATCGA 58.857 47.619 0.00 0.00 0.00 3.59
6051 8288 2.254546 AACCAGAGCACACAATCGAA 57.745 45.000 0.00 0.00 0.00 3.71
6052 8289 1.512926 ACCAGAGCACACAATCGAAC 58.487 50.000 0.00 0.00 0.00 3.95
6054 8291 1.462283 CCAGAGCACACAATCGAACAG 59.538 52.381 0.00 0.00 0.00 3.16
6055 8292 1.462283 CAGAGCACACAATCGAACAGG 59.538 52.381 0.00 0.00 0.00 4.00
6056 8293 0.798776 GAGCACACAATCGAACAGGG 59.201 55.000 0.00 0.00 0.00 4.45
6057 8294 0.108585 AGCACACAATCGAACAGGGT 59.891 50.000 0.00 0.00 0.00 4.34
6059 8296 1.732259 GCACACAATCGAACAGGGTAG 59.268 52.381 0.00 0.00 0.00 3.18
6061 8298 2.736721 CACACAATCGAACAGGGTAGTG 59.263 50.000 0.00 0.00 0.00 2.74
6062 8299 2.631062 ACACAATCGAACAGGGTAGTGA 59.369 45.455 0.00 0.00 0.00 3.41
6063 8300 3.260884 ACACAATCGAACAGGGTAGTGAT 59.739 43.478 0.00 0.00 0.00 3.06
6064 8301 3.865745 CACAATCGAACAGGGTAGTGATC 59.134 47.826 0.00 0.00 0.00 2.92
6065 8302 3.513912 ACAATCGAACAGGGTAGTGATCA 59.486 43.478 0.00 0.00 0.00 2.92
6066 8303 4.115516 CAATCGAACAGGGTAGTGATCAG 58.884 47.826 0.00 0.00 0.00 2.90
6067 8304 1.476891 TCGAACAGGGTAGTGATCAGC 59.523 52.381 0.00 0.00 0.00 4.26
6068 8305 1.204704 CGAACAGGGTAGTGATCAGCA 59.795 52.381 0.00 0.00 0.00 4.41
6069 8306 2.736719 CGAACAGGGTAGTGATCAGCAG 60.737 54.545 0.00 0.00 0.00 4.24
6070 8307 0.539051 ACAGGGTAGTGATCAGCAGC 59.461 55.000 0.00 0.00 0.00 5.25
6071 8308 0.538584 CAGGGTAGTGATCAGCAGCA 59.461 55.000 0.00 0.00 0.00 4.41
6072 8309 0.539051 AGGGTAGTGATCAGCAGCAC 59.461 55.000 0.00 0.00 35.30 4.40
6073 8310 0.462759 GGGTAGTGATCAGCAGCACC 60.463 60.000 0.00 0.00 35.67 5.01
6075 8312 1.757118 GGTAGTGATCAGCAGCACCTA 59.243 52.381 0.00 0.00 35.67 3.08
6077 8314 2.687700 AGTGATCAGCAGCACCTAAG 57.312 50.000 0.00 0.00 35.67 2.18
6078 8315 1.209019 AGTGATCAGCAGCACCTAAGG 59.791 52.381 0.00 0.00 35.67 2.69
6079 8316 1.065854 GTGATCAGCAGCACCTAAGGT 60.066 52.381 0.00 0.00 35.62 3.50
6080 8317 1.630369 TGATCAGCAGCACCTAAGGTT 59.370 47.619 0.00 0.00 31.02 3.50
6081 8318 2.284190 GATCAGCAGCACCTAAGGTTC 58.716 52.381 0.00 0.00 31.02 3.62
6082 8319 0.037326 TCAGCAGCACCTAAGGTTCG 60.037 55.000 0.00 0.00 31.02 3.95
6083 8320 1.021390 CAGCAGCACCTAAGGTTCGG 61.021 60.000 0.00 0.00 31.02 4.30
6084 8321 2.399356 GCAGCACCTAAGGTTCGGC 61.399 63.158 0.00 0.00 33.37 5.54
6085 8322 2.100631 CAGCACCTAAGGTTCGGCG 61.101 63.158 0.00 0.00 31.02 6.46
6086 8323 3.497031 GCACCTAAGGTTCGGCGC 61.497 66.667 0.00 0.00 31.02 6.53
6087 8324 3.186047 CACCTAAGGTTCGGCGCG 61.186 66.667 0.00 0.00 31.02 6.86
6106 8446 1.734137 GCAGCCTAGTGTAGCGCTA 59.266 57.895 14.45 14.45 33.15 4.26
6126 8466 4.502950 GCTAGATCTGGTCCCTTCATTCAG 60.503 50.000 5.18 0.00 0.00 3.02
6144 8484 2.589540 CACCCAAGGGCTGCGATA 59.410 61.111 4.70 0.00 39.32 2.92
6145 8485 1.149174 CACCCAAGGGCTGCGATAT 59.851 57.895 4.70 0.00 39.32 1.63
6240 8816 0.982852 TGGCCCTCTACATCCACCTG 60.983 60.000 0.00 0.00 0.00 4.00
6256 8832 3.414193 TGAGCATGGAGGCCTGGG 61.414 66.667 12.00 0.00 0.00 4.45
6270 8846 1.302832 CTGGGTGCACCTGGTCTTC 60.303 63.158 33.91 16.73 41.11 2.87
6309 8885 3.720601 CAGCCAGGCAGCCACCTA 61.721 66.667 15.80 0.00 38.26 3.08
6310 8886 3.721706 AGCCAGGCAGCCACCTAC 61.722 66.667 15.80 0.00 38.26 3.18
6311 8887 4.033776 GCCAGGCAGCCACCTACA 62.034 66.667 15.80 0.00 38.26 2.74
6313 8889 2.596851 CCAGGCAGCCACCTACACT 61.597 63.158 15.80 0.00 38.26 3.55
6314 8890 1.264749 CCAGGCAGCCACCTACACTA 61.265 60.000 15.80 0.00 38.26 2.74
6315 8891 0.833287 CAGGCAGCCACCTACACTAT 59.167 55.000 15.80 0.00 38.26 2.12
6316 8892 2.039418 CAGGCAGCCACCTACACTATA 58.961 52.381 15.80 0.00 38.26 1.31
6317 8893 2.036475 CAGGCAGCCACCTACACTATAG 59.964 54.545 15.80 0.00 38.26 1.31
6318 8894 1.270358 GGCAGCCACCTACACTATAGC 60.270 57.143 6.55 0.00 0.00 2.97
6346 8933 0.188342 AACACCAAGCCCATCCACTT 59.812 50.000 0.00 0.00 0.00 3.16
6353 8944 2.671070 CCCATCCACTTCGCCACT 59.329 61.111 0.00 0.00 0.00 4.00
6356 8947 0.804989 CCATCCACTTCGCCACTTTC 59.195 55.000 0.00 0.00 0.00 2.62
6357 8948 1.611673 CCATCCACTTCGCCACTTTCT 60.612 52.381 0.00 0.00 0.00 2.52
6358 8949 1.734465 CATCCACTTCGCCACTTTCTC 59.266 52.381 0.00 0.00 0.00 2.87
6359 8950 0.319555 TCCACTTCGCCACTTTCTCG 60.320 55.000 0.00 0.00 0.00 4.04
6360 8951 0.319555 CCACTTCGCCACTTTCTCGA 60.320 55.000 0.00 0.00 0.00 4.04
6361 8952 0.784778 CACTTCGCCACTTTCTCGAC 59.215 55.000 0.00 0.00 31.48 4.20
6362 8953 0.319641 ACTTCGCCACTTTCTCGACC 60.320 55.000 0.00 0.00 31.48 4.79
6363 8954 0.319555 CTTCGCCACTTTCTCGACCA 60.320 55.000 0.00 0.00 31.48 4.02
6364 8955 0.105224 TTCGCCACTTTCTCGACCAA 59.895 50.000 0.00 0.00 31.48 3.67
6365 8956 0.105224 TCGCCACTTTCTCGACCAAA 59.895 50.000 0.00 0.00 0.00 3.28
6366 8957 0.512952 CGCCACTTTCTCGACCAAAG 59.487 55.000 9.60 9.60 36.97 2.77
6367 8958 0.238553 GCCACTTTCTCGACCAAAGC 59.761 55.000 10.70 0.00 34.67 3.51
6372 8985 0.586319 TTTCTCGACCAAAGCAAGCG 59.414 50.000 0.00 0.00 0.00 4.68
6386 8999 2.587247 AAGCGAGGAAGAGGCAGCA 61.587 57.895 0.00 0.00 0.00 4.41
6387 9000 2.511145 GCGAGGAAGAGGCAGCAG 60.511 66.667 0.00 0.00 0.00 4.24
6477 9094 2.809601 CAAGCTTCCGACCGACCG 60.810 66.667 0.00 0.00 0.00 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
100 112 2.195139 GGGATCGGAGAGTCGGGA 59.805 66.667 0.00 0.00 43.63 5.14
132 145 4.279145 TCTGCTAGGAAGTAAACCGAGAT 58.721 43.478 0.00 0.00 33.13 2.75
142 155 2.028130 CTCACGGATCTGCTAGGAAGT 58.972 52.381 0.00 0.00 0.00 3.01
143 156 1.269517 GCTCACGGATCTGCTAGGAAG 60.270 57.143 0.00 0.00 0.00 3.46
197 210 3.490793 ATCGAGCGTCTGATGGCGG 62.491 63.158 0.00 0.00 0.00 6.13
202 215 2.566913 ACTCTACATCGAGCGTCTGAT 58.433 47.619 0.00 0.00 34.35 2.90
282 295 1.289109 CCAACGAACTCGCCGACAAT 61.289 55.000 0.00 0.00 44.43 2.71
288 301 0.457337 ACGATACCAACGAACTCGCC 60.457 55.000 0.00 0.00 44.43 5.54
299 312 4.202080 CGAAATTAGTCCTCCACGATACCA 60.202 45.833 0.00 0.00 0.00 3.25
300 313 4.296690 CGAAATTAGTCCTCCACGATACC 58.703 47.826 0.00 0.00 0.00 2.73
341 354 1.205820 CGCGACGGCTGATACGATA 59.794 57.895 0.00 0.00 36.88 2.92
343 356 4.899687 GCGCGACGGCTGATACGA 62.900 66.667 12.10 0.00 36.88 3.43
400 413 0.766131 TCGGCAACTAAAACCCAGGA 59.234 50.000 0.00 0.00 0.00 3.86
403 416 3.637229 TCAAAATCGGCAACTAAAACCCA 59.363 39.130 0.00 0.00 0.00 4.51
419 432 8.043710 AGATTCTAACTCTGAACGGATCAAAAT 58.956 33.333 0.00 0.00 37.67 1.82
523 545 5.587388 AAATCGACATGCAGATCCAAATT 57.413 34.783 4.28 0.00 0.00 1.82
546 568 2.306847 GAGGGAAACTGCAGTTGGAAA 58.693 47.619 31.73 0.00 38.44 3.13
547 569 1.478654 GGAGGGAAACTGCAGTTGGAA 60.479 52.381 31.73 0.00 38.44 3.53
548 570 0.110486 GGAGGGAAACTGCAGTTGGA 59.890 55.000 31.73 0.00 38.44 3.53
549 571 0.895559 GGGAGGGAAACTGCAGTTGG 60.896 60.000 31.73 0.03 39.67 3.77
550 572 1.237285 CGGGAGGGAAACTGCAGTTG 61.237 60.000 31.73 13.36 39.67 3.16
551 573 1.073199 CGGGAGGGAAACTGCAGTT 59.927 57.895 26.36 26.36 39.67 3.16
582 604 7.214381 ACTGACGCAGGCAATAAAATACTATA 58.786 34.615 10.80 0.00 35.51 1.31
583 605 6.055588 ACTGACGCAGGCAATAAAATACTAT 58.944 36.000 10.80 0.00 35.51 2.12
584 606 5.424757 ACTGACGCAGGCAATAAAATACTA 58.575 37.500 10.80 0.00 35.51 1.82
585 607 4.261801 ACTGACGCAGGCAATAAAATACT 58.738 39.130 10.80 0.00 35.51 2.12
586 608 4.616181 ACTGACGCAGGCAATAAAATAC 57.384 40.909 10.80 0.00 35.51 1.89
698 724 3.926527 CGTCAACTCAAGCTGCTATGTTA 59.073 43.478 0.90 0.00 0.00 2.41
704 730 0.179073 ACACGTCAACTCAAGCTGCT 60.179 50.000 0.00 0.00 0.00 4.24
747 773 1.069636 GGCGAAGAACAAACAGCTCAG 60.070 52.381 0.00 0.00 0.00 3.35
755 781 1.329292 CACGACTTGGCGAAGAACAAA 59.671 47.619 16.00 0.00 32.98 2.83
808 834 1.155889 TTGCACGGATACTGCACAAG 58.844 50.000 2.00 0.00 45.83 3.16
812 838 1.066215 ACTGATTGCACGGATACTGCA 60.066 47.619 0.00 0.00 44.97 4.41
813 839 1.656652 ACTGATTGCACGGATACTGC 58.343 50.000 0.00 0.00 39.98 4.40
814 840 5.773575 ACTATACTGATTGCACGGATACTG 58.226 41.667 0.00 0.00 0.00 2.74
815 841 7.704578 ATACTATACTGATTGCACGGATACT 57.295 36.000 0.00 0.00 0.00 2.12
816 842 8.675504 AGTATACTATACTGATTGCACGGATAC 58.324 37.037 2.75 0.00 0.00 2.24
817 843 8.803397 AGTATACTATACTGATTGCACGGATA 57.197 34.615 2.75 0.00 0.00 2.59
834 866 7.468141 TGGCGCTACTACTACTAGTATACTA 57.532 40.000 7.64 12.05 35.34 1.82
835 867 6.352016 TGGCGCTACTACTACTAGTATACT 57.648 41.667 10.87 10.87 35.34 2.12
836 868 6.648725 AGTTGGCGCTACTACTACTAGTATAC 59.351 42.308 7.64 0.00 35.34 1.47
838 870 5.619220 AGTTGGCGCTACTACTACTAGTAT 58.381 41.667 7.64 0.00 35.34 2.12
854 886 2.281208 TTTGACCCGGAGTTGGCG 60.281 61.111 0.73 0.00 0.00 5.69
855 887 0.035739 TACTTTGACCCGGAGTTGGC 59.964 55.000 0.73 0.00 0.00 4.52
936 969 4.222588 TGCCGAAGAATTTCCATGGAAAAT 59.777 37.500 36.88 31.02 45.60 1.82
954 987 0.530744 AGAATCAGTAAGCGTGCCGA 59.469 50.000 0.00 0.00 0.00 5.54
962 995 6.589523 CACAGAACCTTGAGAGAATCAGTAAG 59.410 42.308 0.00 0.00 39.68 2.34
1045 1078 0.895530 TACCAAGACGCTCTCCCTTG 59.104 55.000 0.00 0.00 37.58 3.61
1242 1318 0.749649 CGAAGGAGATGACAGGGAGG 59.250 60.000 0.00 0.00 0.00 4.30
1325 2110 2.680841 GCGTGGCATTCCAACTTATGTA 59.319 45.455 0.00 0.00 45.53 2.29
1335 2120 1.953559 TAGAGATTGCGTGGCATTCC 58.046 50.000 8.40 2.42 39.00 3.01
1363 2151 7.515514 AGGATACCATCTGAAATAGATCACCTT 59.484 37.037 0.00 0.00 44.34 3.50
1504 2292 5.344743 TCCTGGCAAACTTGTAGAGATAG 57.655 43.478 0.00 0.00 0.00 2.08
1524 2312 4.555610 CCAGATCTGGCTGCTTCC 57.444 61.111 28.45 0.00 44.73 3.46
1635 2438 1.392589 ACAGCAACCAAACACAGAGG 58.607 50.000 0.00 0.00 0.00 3.69
1677 2480 3.349927 CCAACAGAAAGAGCATGATGGA 58.650 45.455 0.00 0.00 38.72 3.41
1796 2599 0.246910 TTCGCACGTGGCATACCTTA 59.753 50.000 18.88 0.00 45.17 2.69
1806 2609 1.531522 GCTTGCACTTTTCGCACGTG 61.532 55.000 12.28 12.28 39.59 4.49
1807 2610 1.298339 GCTTGCACTTTTCGCACGT 60.298 52.632 0.00 0.00 39.59 4.49
1808 2611 1.264141 CTGCTTGCACTTTTCGCACG 61.264 55.000 0.00 0.00 39.59 5.34
1809 2612 1.543106 GCTGCTTGCACTTTTCGCAC 61.543 55.000 0.00 0.00 39.59 5.34
1810 2613 1.299316 GCTGCTTGCACTTTTCGCA 60.299 52.632 0.00 0.00 42.31 5.10
1811 2614 3.530666 GCTGCTTGCACTTTTCGC 58.469 55.556 0.00 0.00 42.31 4.70
1820 2623 3.278592 GAGCTTGGGTGCTGCTTGC 62.279 63.158 0.00 0.00 44.17 4.01
1821 2624 1.177256 AAGAGCTTGGGTGCTGCTTG 61.177 55.000 0.00 0.00 44.17 4.01
1822 2625 0.468771 AAAGAGCTTGGGTGCTGCTT 60.469 50.000 0.00 0.00 44.17 3.91
1823 2626 0.401738 TAAAGAGCTTGGGTGCTGCT 59.598 50.000 0.00 0.00 44.17 4.24
1824 2627 1.467920 ATAAAGAGCTTGGGTGCTGC 58.532 50.000 0.00 0.00 44.17 5.25
1825 2628 4.525912 AAAATAAAGAGCTTGGGTGCTG 57.474 40.909 0.00 0.00 44.17 4.41
1827 2630 5.139435 AGAAAAATAAAGAGCTTGGGTGC 57.861 39.130 0.00 0.00 0.00 5.01
1828 2631 7.209475 TGAAAGAAAAATAAAGAGCTTGGGTG 58.791 34.615 0.00 0.00 0.00 4.61
1829 2632 7.360113 TGAAAGAAAAATAAAGAGCTTGGGT 57.640 32.000 0.00 0.00 0.00 4.51
1830 2633 8.715088 CATTGAAAGAAAAATAAAGAGCTTGGG 58.285 33.333 0.00 0.00 0.00 4.12
1831 2634 9.480053 TCATTGAAAGAAAAATAAAGAGCTTGG 57.520 29.630 0.00 0.00 0.00 3.61
1942 2745 7.148540 GTACACCACGTATGAACACATATGTTT 60.149 37.037 5.37 4.40 41.71 2.83
1943 2746 6.311935 GTACACCACGTATGAACACATATGTT 59.688 38.462 5.37 0.00 41.71 2.71
1944 2747 4.827692 ACACCACGTATGAACACATATGT 58.172 39.130 1.41 1.41 43.29 2.29
1945 2748 5.808030 TGTACACCACGTATGAACACATATG 59.192 40.000 0.00 0.00 38.63 1.78
1946 2749 5.808540 GTGTACACCACGTATGAACACATAT 59.191 40.000 15.42 0.00 33.61 1.78
1947 2750 5.162794 GTGTACACCACGTATGAACACATA 58.837 41.667 15.42 0.00 33.61 2.29
1948 2751 3.991773 GTGTACACCACGTATGAACACAT 59.008 43.478 15.42 0.00 33.61 3.21
1949 2752 3.382855 GTGTACACCACGTATGAACACA 58.617 45.455 15.42 7.93 33.61 3.72
1975 2778 8.903820 GCCTATTTTACTCCATGTATTTGTCTT 58.096 33.333 0.00 0.00 0.00 3.01
1976 2779 7.502561 GGCCTATTTTACTCCATGTATTTGTCT 59.497 37.037 0.00 0.00 0.00 3.41
1977 2780 7.284489 TGGCCTATTTTACTCCATGTATTTGTC 59.716 37.037 3.32 0.00 0.00 3.18
1978 2781 7.122715 TGGCCTATTTTACTCCATGTATTTGT 58.877 34.615 3.32 0.00 0.00 2.83
1979 2782 7.581213 TGGCCTATTTTACTCCATGTATTTG 57.419 36.000 3.32 0.00 0.00 2.32
1980 2783 8.782137 AATGGCCTATTTTACTCCATGTATTT 57.218 30.769 3.32 0.00 37.57 1.40
1981 2784 8.782137 AAATGGCCTATTTTACTCCATGTATT 57.218 30.769 3.32 0.00 35.47 1.89
1982 2785 7.451566 GGAAATGGCCTATTTTACTCCATGTAT 59.548 37.037 3.32 0.00 39.06 2.29
1983 2786 6.775629 GGAAATGGCCTATTTTACTCCATGTA 59.224 38.462 3.32 0.00 39.06 2.29
1984 2787 5.598417 GGAAATGGCCTATTTTACTCCATGT 59.402 40.000 3.32 0.00 39.06 3.21
1985 2788 5.835280 AGGAAATGGCCTATTTTACTCCATG 59.165 40.000 3.32 0.00 39.06 3.66
1986 2789 6.030727 AGGAAATGGCCTATTTTACTCCAT 57.969 37.500 3.32 0.00 39.06 3.41
1987 2790 5.466127 AGGAAATGGCCTATTTTACTCCA 57.534 39.130 3.32 0.00 39.06 3.86
1988 2791 6.791867 AAAGGAAATGGCCTATTTTACTCC 57.208 37.500 3.32 6.32 39.06 3.85
1989 2792 8.094548 ACAAAAAGGAAATGGCCTATTTTACTC 58.905 33.333 3.32 0.00 39.06 2.59
1990 2793 7.973402 ACAAAAAGGAAATGGCCTATTTTACT 58.027 30.769 3.32 4.77 39.06 2.24
1991 2794 8.615878 AACAAAAAGGAAATGGCCTATTTTAC 57.384 30.769 3.32 2.23 39.06 2.01
1992 2795 9.634021 AAAACAAAAAGGAAATGGCCTATTTTA 57.366 25.926 3.32 0.00 39.06 1.52
1993 2796 8.532186 AAAACAAAAAGGAAATGGCCTATTTT 57.468 26.923 3.32 0.94 39.06 1.82
1994 2797 8.412456 CAAAAACAAAAAGGAAATGGCCTATTT 58.588 29.630 3.32 8.59 41.59 1.40
1995 2798 7.014134 CCAAAAACAAAAAGGAAATGGCCTATT 59.986 33.333 3.32 0.00 37.26 1.73
1996 2799 6.489700 CCAAAAACAAAAAGGAAATGGCCTAT 59.510 34.615 3.32 0.00 37.26 2.57
1997 2800 5.825151 CCAAAAACAAAAAGGAAATGGCCTA 59.175 36.000 3.32 0.00 37.26 3.93
1998 2801 4.644234 CCAAAAACAAAAAGGAAATGGCCT 59.356 37.500 3.32 0.00 40.93 5.19
1999 2802 4.202101 CCCAAAAACAAAAAGGAAATGGCC 60.202 41.667 0.00 0.00 0.00 5.36
2000 2803 4.642437 TCCCAAAAACAAAAAGGAAATGGC 59.358 37.500 0.00 0.00 0.00 4.40
2001 2804 5.885352 AGTCCCAAAAACAAAAAGGAAATGG 59.115 36.000 0.00 0.00 0.00 3.16
2002 2805 6.183360 CCAGTCCCAAAAACAAAAAGGAAATG 60.183 38.462 0.00 0.00 0.00 2.32
2003 2806 5.885352 CCAGTCCCAAAAACAAAAAGGAAAT 59.115 36.000 0.00 0.00 0.00 2.17
2004 2807 5.221945 ACCAGTCCCAAAAACAAAAAGGAAA 60.222 36.000 0.00 0.00 0.00 3.13
2005 2808 4.287326 ACCAGTCCCAAAAACAAAAAGGAA 59.713 37.500 0.00 0.00 0.00 3.36
2006 2809 3.841255 ACCAGTCCCAAAAACAAAAAGGA 59.159 39.130 0.00 0.00 0.00 3.36
2007 2810 4.214986 ACCAGTCCCAAAAACAAAAAGG 57.785 40.909 0.00 0.00 0.00 3.11
2008 2811 7.335673 ACAAATACCAGTCCCAAAAACAAAAAG 59.664 33.333 0.00 0.00 0.00 2.27
2009 2812 7.168905 ACAAATACCAGTCCCAAAAACAAAAA 58.831 30.769 0.00 0.00 0.00 1.94
2010 2813 6.712276 ACAAATACCAGTCCCAAAAACAAAA 58.288 32.000 0.00 0.00 0.00 2.44
2011 2814 6.155393 AGACAAATACCAGTCCCAAAAACAAA 59.845 34.615 0.00 0.00 35.38 2.83
2012 2815 5.659079 AGACAAATACCAGTCCCAAAAACAA 59.341 36.000 0.00 0.00 35.38 2.83
2013 2816 5.205056 AGACAAATACCAGTCCCAAAAACA 58.795 37.500 0.00 0.00 35.38 2.83
2014 2817 5.784578 AGACAAATACCAGTCCCAAAAAC 57.215 39.130 0.00 0.00 35.38 2.43
2015 2818 6.800072 AAAGACAAATACCAGTCCCAAAAA 57.200 33.333 0.00 0.00 35.38 1.94
2016 2819 6.800072 AAAAGACAAATACCAGTCCCAAAA 57.200 33.333 0.00 0.00 35.38 2.44
2017 2820 6.800072 AAAAAGACAAATACCAGTCCCAAA 57.200 33.333 0.00 0.00 35.38 3.28
2076 2879 9.448438 TGCATGTTCTTCAACTATGTATAAAGT 57.552 29.630 0.00 0.00 33.17 2.66
2079 2882 8.344831 GCATGCATGTTCTTCAACTATGTATAA 58.655 33.333 26.79 0.00 31.57 0.98
2080 2883 7.307337 CGCATGCATGTTCTTCAACTATGTATA 60.307 37.037 26.79 0.00 31.57 1.47
2081 2884 6.512253 CGCATGCATGTTCTTCAACTATGTAT 60.512 38.462 26.79 0.00 32.22 2.29
2082 2885 5.220643 CGCATGCATGTTCTTCAACTATGTA 60.221 40.000 26.79 0.00 33.17 2.29
2083 2886 4.437794 CGCATGCATGTTCTTCAACTATGT 60.438 41.667 26.79 0.00 33.17 2.29
2084 2887 4.033019 CGCATGCATGTTCTTCAACTATG 58.967 43.478 26.79 0.00 33.17 2.23
2085 2888 3.691118 ACGCATGCATGTTCTTCAACTAT 59.309 39.130 26.79 0.00 33.17 2.12
2086 2889 3.073678 ACGCATGCATGTTCTTCAACTA 58.926 40.909 26.79 0.00 33.17 2.24
2087 2890 1.881973 ACGCATGCATGTTCTTCAACT 59.118 42.857 26.79 0.00 33.17 3.16
2088 2891 2.336554 ACGCATGCATGTTCTTCAAC 57.663 45.000 26.79 7.51 0.00 3.18
2089 2892 4.700268 AATACGCATGCATGTTCTTCAA 57.300 36.364 26.79 7.39 0.00 2.69
2090 2893 4.413969 CAAATACGCATGCATGTTCTTCA 58.586 39.130 26.79 8.06 0.00 3.02
2091 2894 3.241322 GCAAATACGCATGCATGTTCTTC 59.759 43.478 26.79 9.65 42.12 2.87
2092 2895 3.181397 GCAAATACGCATGCATGTTCTT 58.819 40.909 26.79 13.02 42.12 2.52
2093 2896 2.164017 TGCAAATACGCATGCATGTTCT 59.836 40.909 26.79 12.41 46.87 3.01
2094 2897 2.528125 TGCAAATACGCATGCATGTTC 58.472 42.857 26.79 11.10 46.87 3.18
2095 2898 2.651135 TGCAAATACGCATGCATGTT 57.349 40.000 26.79 16.80 46.87 2.71
2100 2903 4.710680 ACAAATTTTGCAAATACGCATGC 58.289 34.783 13.65 7.91 42.62 4.06
2101 2904 7.483576 CAAAACAAATTTTGCAAATACGCATG 58.516 30.769 13.65 9.09 46.05 4.06
2102 2905 7.606132 CAAAACAAATTTTGCAAATACGCAT 57.394 28.000 13.65 0.00 46.05 4.73
2163 2966 3.462021 CATGGAGCCCGTTTTTCAAAAA 58.538 40.909 0.00 0.00 0.00 1.94
2164 2967 2.224161 CCATGGAGCCCGTTTTTCAAAA 60.224 45.455 5.56 0.00 0.00 2.44
2165 2968 1.342819 CCATGGAGCCCGTTTTTCAAA 59.657 47.619 5.56 0.00 0.00 2.69
2166 2969 0.965439 CCATGGAGCCCGTTTTTCAA 59.035 50.000 5.56 0.00 0.00 2.69
2167 2970 0.111446 TCCATGGAGCCCGTTTTTCA 59.889 50.000 11.44 0.00 0.00 2.69
2168 2971 0.811281 CTCCATGGAGCCCGTTTTTC 59.189 55.000 28.45 0.00 35.31 2.29
2169 2972 2.961424 CTCCATGGAGCCCGTTTTT 58.039 52.632 28.45 0.00 35.31 1.94
2170 2973 4.743018 CTCCATGGAGCCCGTTTT 57.257 55.556 28.45 0.00 35.31 2.43
2178 2981 1.915078 AAAGGACGGGCTCCATGGAG 61.915 60.000 33.73 33.73 42.46 3.86
2179 2982 1.923395 AAAGGACGGGCTCCATGGA 60.923 57.895 15.27 15.27 42.46 3.41
2180 2983 1.750399 CAAAGGACGGGCTCCATGG 60.750 63.158 4.97 4.97 42.46 3.66
2181 2984 2.409870 GCAAAGGACGGGCTCCATG 61.410 63.158 0.00 0.00 42.46 3.66
2182 2985 2.044946 GCAAAGGACGGGCTCCAT 60.045 61.111 0.00 0.00 42.46 3.41
2183 2986 3.126703 TTGCAAAGGACGGGCTCCA 62.127 57.895 0.00 0.00 42.46 3.86
2184 2987 2.282180 TTGCAAAGGACGGGCTCC 60.282 61.111 0.00 0.00 39.81 4.70
2185 2988 2.954611 GTTGCAAAGGACGGGCTC 59.045 61.111 0.00 0.00 0.00 4.70
2186 2989 2.978010 CGTTGCAAAGGACGGGCT 60.978 61.111 0.00 0.00 35.74 5.19
2187 2990 4.700365 GCGTTGCAAAGGACGGGC 62.700 66.667 14.31 0.10 39.52 6.13
2188 2991 2.978010 AGCGTTGCAAAGGACGGG 60.978 61.111 14.31 0.00 39.52 5.28
2189 2992 2.252260 CAGCGTTGCAAAGGACGG 59.748 61.111 14.31 0.00 39.52 4.79
2199 3002 2.036571 TGGCATGAGAGCAGCGTTG 61.037 57.895 0.00 0.00 35.83 4.10
2200 3003 2.037136 GTGGCATGAGAGCAGCGTT 61.037 57.895 0.00 0.00 35.83 4.84
2201 3004 2.435586 GTGGCATGAGAGCAGCGT 60.436 61.111 0.00 0.00 35.83 5.07
2202 3005 3.561213 CGTGGCATGAGAGCAGCG 61.561 66.667 0.00 0.00 35.83 5.18
2203 3006 2.435586 ACGTGGCATGAGAGCAGC 60.436 61.111 14.82 0.00 35.83 5.25
2204 3007 2.747822 GCACGTGGCATGAGAGCAG 61.748 63.158 18.88 0.00 43.97 4.24
2205 3008 2.743538 GCACGTGGCATGAGAGCA 60.744 61.111 18.88 0.00 43.97 4.26
2214 3017 1.906994 TACGATTTGCTGCACGTGGC 61.907 55.000 21.98 13.75 45.13 5.01
2494 3309 6.362283 CGGTTTGCACTAAAGATAAAACAAGG 59.638 38.462 0.00 0.00 30.89 3.61
2601 3439 3.398318 TCCTAAGTGCTGTCCAGGATA 57.602 47.619 0.00 0.00 30.43 2.59
2694 3532 3.959495 ATATTGCCCACTGTTGATCCT 57.041 42.857 0.00 0.00 0.00 3.24
2733 3571 5.897250 ACCAAGTGTTCCAAAGAAAATAGGT 59.103 36.000 0.00 0.00 32.58 3.08
2762 3600 5.731957 TTTAAAACTGCCCCTATTTGGAC 57.268 39.130 0.00 0.00 38.35 4.02
2763 3601 8.437274 TTTATTTAAAACTGCCCCTATTTGGA 57.563 30.769 0.00 0.00 38.35 3.53
2765 3603 9.719355 AACTTTATTTAAAACTGCCCCTATTTG 57.281 29.630 0.00 0.00 0.00 2.32
2766 3604 9.719355 CAACTTTATTTAAAACTGCCCCTATTT 57.281 29.630 0.00 0.00 0.00 1.40
2767 3605 7.822334 GCAACTTTATTTAAAACTGCCCCTATT 59.178 33.333 0.00 0.00 31.65 1.73
2768 3606 7.038658 TGCAACTTTATTTAAAACTGCCCCTAT 60.039 33.333 0.00 0.00 34.47 2.57
2769 3607 6.267928 TGCAACTTTATTTAAAACTGCCCCTA 59.732 34.615 0.00 0.00 34.47 3.53
2770 3608 5.071115 TGCAACTTTATTTAAAACTGCCCCT 59.929 36.000 0.00 0.00 34.47 4.79
2771 3609 5.301555 TGCAACTTTATTTAAAACTGCCCC 58.698 37.500 0.00 0.00 34.47 5.80
2772 3610 6.852858 TTGCAACTTTATTTAAAACTGCCC 57.147 33.333 0.00 0.00 34.47 5.36
2773 3611 8.555361 TGATTTGCAACTTTATTTAAAACTGCC 58.445 29.630 0.00 1.54 34.47 4.85
2774 3612 9.928236 TTGATTTGCAACTTTATTTAAAACTGC 57.072 25.926 0.00 8.20 35.26 4.40
2784 3622 9.777297 ACCAACTTTATTGATTTGCAACTTTAT 57.223 25.926 0.00 0.00 39.78 1.40
2785 3623 9.039870 CACCAACTTTATTGATTTGCAACTTTA 57.960 29.630 0.00 0.00 39.78 1.85
2786 3624 7.768120 TCACCAACTTTATTGATTTGCAACTTT 59.232 29.630 0.00 0.00 39.78 2.66
2787 3625 7.271511 TCACCAACTTTATTGATTTGCAACTT 58.728 30.769 0.00 0.00 39.78 2.66
2788 3626 6.815089 TCACCAACTTTATTGATTTGCAACT 58.185 32.000 0.00 0.00 39.78 3.16
2789 3627 6.922957 TCTCACCAACTTTATTGATTTGCAAC 59.077 34.615 0.00 0.00 39.78 4.17
2790 3628 7.048629 TCTCACCAACTTTATTGATTTGCAA 57.951 32.000 0.00 0.00 41.53 4.08
2791 3629 6.647334 TCTCACCAACTTTATTGATTTGCA 57.353 33.333 0.00 0.00 0.00 4.08
2792 3630 8.538409 AAATCTCACCAACTTTATTGATTTGC 57.462 30.769 0.00 0.00 33.44 3.68
2793 3631 9.918630 AGAAATCTCACCAACTTTATTGATTTG 57.081 29.630 0.00 0.00 34.40 2.32
2831 3669 9.283768 AGAATTTTAAAACTGCCCCTATTTTTG 57.716 29.630 1.97 0.00 0.00 2.44
3168 4006 1.393539 CTTTGCTACGGTCCAATGTCG 59.606 52.381 0.00 0.00 0.00 4.35
3315 4192 5.977129 CACGATGGCTGCGAATATATATGTA 59.023 40.000 6.58 0.00 0.00 2.29
3529 4943 1.084289 GGACCTGCACCGTTAACATC 58.916 55.000 6.39 0.00 0.00 3.06
3680 5098 5.992217 GGTAAGCAAATCTGACTACCATAGG 59.008 44.000 0.00 0.00 0.00 2.57
3769 5188 0.319986 TGCTCGCACGGTTTGACATA 60.320 50.000 0.00 0.00 0.00 2.29
3860 5279 8.358148 GGGAAATCAGATAGTACGATAACAGAA 58.642 37.037 0.00 0.00 0.00 3.02
3879 5300 3.255888 GTGGACAACAAGAAGGGGAAATC 59.744 47.826 0.00 0.00 0.00 2.17
4141 5578 3.930229 AGCGACACGAATATGCACTTTAA 59.070 39.130 0.00 0.00 0.00 1.52
4148 5747 3.383546 TTTTCAGCGACACGAATATGC 57.616 42.857 0.00 0.00 0.00 3.14
4176 5775 3.485394 TGTCAACAGAATTAGCCTGCAA 58.515 40.909 0.00 0.00 35.14 4.08
4380 5979 4.759782 ACCGAAGTTGGTATCATCTTGAG 58.240 43.478 4.00 0.00 41.55 3.02
4822 6442 3.823304 AGTCATTGGGCTCAAAGAACTTC 59.177 43.478 5.69 0.00 36.36 3.01
4902 6522 3.151554 TCAAGCTGAACTCGTACCAGTA 58.848 45.455 0.00 0.00 0.00 2.74
4923 6550 9.220767 GACATACAGAAAGTTTATCCAAGAACT 57.779 33.333 0.00 0.00 37.69 3.01
4943 6570 8.734386 AGAGAATGAAACAAAATCTGGACATAC 58.266 33.333 0.00 0.00 0.00 2.39
4945 6572 7.600065 CAGAGAATGAAACAAAATCTGGACAT 58.400 34.615 0.00 0.00 31.29 3.06
5024 6654 1.696336 GAGCCATCTTCCTCCTGCATA 59.304 52.381 0.00 0.00 0.00 3.14
5134 6770 1.272147 GGTGCCTTTCTTCAGGATGGT 60.272 52.381 0.00 0.00 35.71 3.55
5208 6849 3.655276 ATAATAGCACCTACGGTTCGG 57.345 47.619 0.00 0.00 31.02 4.30
5254 6992 1.209019 ACCTATGTGAAGCCAGCAGAG 59.791 52.381 0.00 0.00 0.00 3.35
5333 7077 3.321968 AGAACCATCTACTGATATGCGCA 59.678 43.478 14.96 14.96 32.88 6.09
5351 7095 2.288395 CCCATGACAGGCACAAAAGAAC 60.288 50.000 0.00 0.00 0.00 3.01
5385 7129 4.420168 ACGGGAACATTTATGAATTTGCG 58.580 39.130 0.00 0.00 0.00 4.85
5386 7130 4.499040 CGACGGGAACATTTATGAATTTGC 59.501 41.667 0.00 0.00 0.00 3.68
5387 7131 5.511377 CACGACGGGAACATTTATGAATTTG 59.489 40.000 0.00 0.00 0.00 2.32
5488 7234 3.243771 ACGGAGTAGTTGGAACTGTCAAG 60.244 47.826 2.14 1.31 41.94 3.02
5498 7244 0.034896 AACCTGCACGGAGTAGTTGG 59.965 55.000 8.91 0.00 41.61 3.77
5506 7253 1.974265 TTTGAATGAACCTGCACGGA 58.026 45.000 8.91 0.00 36.31 4.69
5517 7264 2.095110 CGGCTGAACTGCATTTGAATGA 60.095 45.455 7.86 0.00 38.70 2.57
5538 7285 3.896648 TTTTTCCATCTTCACACGCTC 57.103 42.857 0.00 0.00 0.00 5.03
5573 7320 3.760684 GACAGAATCACCATCAAAGCCTT 59.239 43.478 0.00 0.00 0.00 4.35
5579 7326 4.999311 CACTTCTGACAGAATCACCATCAA 59.001 41.667 18.04 0.00 33.13 2.57
5618 7365 3.482110 GCGTATTCGGAAATGAACAATGC 59.518 43.478 0.00 0.00 37.56 3.56
5685 7432 1.582502 GCGTACACGATCACAGCTTAC 59.417 52.381 5.84 0.00 43.02 2.34
5849 7596 0.813610 CAACAGGTCACGGAGCAACA 60.814 55.000 6.00 0.00 31.89 3.33
5850 7597 1.941812 CAACAGGTCACGGAGCAAC 59.058 57.895 6.00 0.00 31.89 4.17
5852 7599 2.280797 GCAACAGGTCACGGAGCA 60.281 61.111 6.00 0.00 31.89 4.26
5853 7600 3.050275 GGCAACAGGTCACGGAGC 61.050 66.667 0.00 0.00 0.00 4.70
5854 7601 1.669115 CAGGCAACAGGTCACGGAG 60.669 63.158 0.00 0.00 41.41 4.63
5855 7602 2.425592 CAGGCAACAGGTCACGGA 59.574 61.111 0.00 0.00 41.41 4.69
5856 7603 2.111043 ACAGGCAACAGGTCACGG 59.889 61.111 0.00 0.00 41.41 4.94
5857 7604 0.249699 TACACAGGCAACAGGTCACG 60.250 55.000 0.00 0.00 41.41 4.35
5858 7605 1.961793 TTACACAGGCAACAGGTCAC 58.038 50.000 0.00 0.00 41.41 3.67
5859 7606 2.719531 TTTACACAGGCAACAGGTCA 57.280 45.000 0.00 0.00 41.41 4.02
5860 7607 4.546570 GATTTTTACACAGGCAACAGGTC 58.453 43.478 0.00 0.00 41.41 3.85
5861 7608 3.004315 CGATTTTTACACAGGCAACAGGT 59.996 43.478 0.00 0.00 41.41 4.00
5862 7609 3.564511 CGATTTTTACACAGGCAACAGG 58.435 45.455 0.00 0.00 41.41 4.00
5867 7614 2.606795 GCAAGCGATTTTTACACAGGCA 60.607 45.455 0.00 0.00 0.00 4.75
5868 7615 1.985684 GCAAGCGATTTTTACACAGGC 59.014 47.619 0.00 0.00 0.00 4.85
5959 7708 1.072173 GCAAAAGAACAAAGGGGCCAT 59.928 47.619 4.39 0.00 0.00 4.40
5963 7712 2.621526 AGTACGCAAAAGAACAAAGGGG 59.378 45.455 0.00 0.00 0.00 4.79
5964 7713 3.314080 TGAGTACGCAAAAGAACAAAGGG 59.686 43.478 0.00 0.00 0.00 3.95
5994 7743 4.689345 ACCCAATTTTCGTTCGAGTAGAAG 59.311 41.667 0.00 0.00 39.95 2.85
5998 8235 2.988493 CGACCCAATTTTCGTTCGAGTA 59.012 45.455 0.00 0.00 0.00 2.59
6008 8245 5.081032 TCAAGAATTACCCGACCCAATTTT 58.919 37.500 0.00 0.00 0.00 1.82
6009 8246 4.668636 TCAAGAATTACCCGACCCAATTT 58.331 39.130 0.00 0.00 0.00 1.82
6012 8249 3.791953 TTCAAGAATTACCCGACCCAA 57.208 42.857 0.00 0.00 0.00 4.12
6014 8251 2.751259 GGTTTCAAGAATTACCCGACCC 59.249 50.000 0.00 0.00 0.00 4.46
6017 8254 4.575885 CTCTGGTTTCAAGAATTACCCGA 58.424 43.478 2.20 1.10 0.00 5.14
6019 8256 4.079253 TGCTCTGGTTTCAAGAATTACCC 58.921 43.478 2.20 0.00 0.00 3.69
6027 8264 3.607775 CGATTGTGTGCTCTGGTTTCAAG 60.608 47.826 0.00 0.00 0.00 3.02
6031 8268 2.254546 TCGATTGTGTGCTCTGGTTT 57.745 45.000 0.00 0.00 0.00 3.27
6040 8277 2.736721 CACTACCCTGTTCGATTGTGTG 59.263 50.000 0.00 0.00 0.00 3.82
6049 8286 2.898705 CTGCTGATCACTACCCTGTTC 58.101 52.381 0.00 0.00 0.00 3.18
6050 8287 1.065854 GCTGCTGATCACTACCCTGTT 60.066 52.381 0.00 0.00 0.00 3.16
6051 8288 0.539051 GCTGCTGATCACTACCCTGT 59.461 55.000 0.00 0.00 0.00 4.00
6052 8289 0.538584 TGCTGCTGATCACTACCCTG 59.461 55.000 0.00 0.00 0.00 4.45
6054 8291 0.462759 GGTGCTGCTGATCACTACCC 60.463 60.000 0.00 0.00 33.91 3.69
6055 8292 0.539051 AGGTGCTGCTGATCACTACC 59.461 55.000 0.00 0.00 33.91 3.18
6056 8293 3.452474 CTTAGGTGCTGCTGATCACTAC 58.548 50.000 0.00 0.00 33.91 2.73
6057 8294 2.432146 CCTTAGGTGCTGCTGATCACTA 59.568 50.000 0.00 0.00 33.91 2.74
6059 8296 1.065854 ACCTTAGGTGCTGCTGATCAC 60.066 52.381 1.74 0.00 32.98 3.06
6061 8298 2.284190 GAACCTTAGGTGCTGCTGATC 58.716 52.381 3.99 0.00 35.34 2.92
6062 8299 1.406069 CGAACCTTAGGTGCTGCTGAT 60.406 52.381 3.99 0.00 35.34 2.90
6063 8300 0.037326 CGAACCTTAGGTGCTGCTGA 60.037 55.000 3.99 0.00 35.34 4.26
6064 8301 1.021390 CCGAACCTTAGGTGCTGCTG 61.021 60.000 3.99 0.00 35.34 4.41
6065 8302 1.296715 CCGAACCTTAGGTGCTGCT 59.703 57.895 3.99 0.00 35.34 4.24
6066 8303 2.399356 GCCGAACCTTAGGTGCTGC 61.399 63.158 10.02 10.02 34.48 5.25
6067 8304 2.100631 CGCCGAACCTTAGGTGCTG 61.101 63.158 3.99 0.00 35.34 4.41
6068 8305 2.264794 CGCCGAACCTTAGGTGCT 59.735 61.111 3.99 0.00 35.34 4.40
6070 8307 3.186047 CGCGCCGAACCTTAGGTG 61.186 66.667 3.99 0.00 35.34 4.00
6071 8308 4.446413 CCGCGCCGAACCTTAGGT 62.446 66.667 0.00 0.00 37.65 3.08
6083 8320 4.508128 TACACTAGGCTGCCGCGC 62.508 66.667 13.96 0.00 36.88 6.86
6084 8321 2.278857 CTACACTAGGCTGCCGCG 60.279 66.667 13.96 10.78 36.88 6.46
6085 8322 2.586357 GCTACACTAGGCTGCCGC 60.586 66.667 13.96 4.77 0.00 6.53
6086 8323 2.278857 CGCTACACTAGGCTGCCG 60.279 66.667 13.96 2.09 0.00 5.69
6087 8324 1.735376 TAGCGCTACACTAGGCTGCC 61.735 60.000 14.45 11.65 35.16 4.85
6089 8326 1.309950 TCTAGCGCTACACTAGGCTG 58.690 55.000 14.45 0.12 38.13 4.85
6090 8327 2.156098 GATCTAGCGCTACACTAGGCT 58.844 52.381 14.45 0.00 38.13 4.58
6091 8328 2.095466 CAGATCTAGCGCTACACTAGGC 60.095 54.545 14.45 1.64 38.13 3.93
6092 8329 2.486203 CCAGATCTAGCGCTACACTAGG 59.514 54.545 14.45 9.41 38.13 3.02
6093 8330 3.142951 ACCAGATCTAGCGCTACACTAG 58.857 50.000 14.45 5.26 38.79 2.57
6096 8436 1.001158 GGACCAGATCTAGCGCTACAC 60.001 57.143 14.45 7.78 0.00 2.90
6106 8446 2.172293 GCTGAATGAAGGGACCAGATCT 59.828 50.000 0.00 0.00 0.00 2.75
6216 8792 0.035458 GGATGTAGAGGGCCAATCGG 59.965 60.000 6.18 0.00 0.00 4.18
6240 8816 3.415087 ACCCAGGCCTCCATGCTC 61.415 66.667 0.00 0.00 0.00 4.26
6256 8832 1.007336 CGTACGAAGACCAGGTGCAC 61.007 60.000 10.44 8.80 0.00 4.57
6292 8868 3.720601 TAGGTGGCTGCCTGGCTG 61.721 66.667 21.03 20.46 39.60 4.85
6298 8874 1.270358 GCTATAGTGTAGGTGGCTGCC 60.270 57.143 12.87 12.87 0.00 4.85
6300 8876 1.603172 GCGCTATAGTGTAGGTGGCTG 60.603 57.143 14.57 0.00 0.00 4.85
6302 8878 0.663568 CGCGCTATAGTGTAGGTGGC 60.664 60.000 14.57 0.00 0.00 5.01
6303 8879 0.039437 CCGCGCTATAGTGTAGGTGG 60.039 60.000 14.57 5.89 0.00 4.61
6305 8881 1.105167 TGCCGCGCTATAGTGTAGGT 61.105 55.000 22.19 0.00 0.00 3.08
6306 8882 0.387367 CTGCCGCGCTATAGTGTAGG 60.387 60.000 19.20 19.20 0.00 3.18
6307 8883 1.004277 GCTGCCGCGCTATAGTGTAG 61.004 60.000 14.57 9.06 0.00 2.74
6308 8884 1.007734 GCTGCCGCGCTATAGTGTA 60.008 57.895 14.57 0.00 0.00 2.90
6309 8885 2.279517 GCTGCCGCGCTATAGTGT 60.280 61.111 14.57 0.00 0.00 3.55
6310 8886 1.882625 TTGCTGCCGCGCTATAGTG 60.883 57.895 5.56 9.02 39.65 2.74
6311 8887 1.883084 GTTGCTGCCGCGCTATAGT 60.883 57.895 5.56 0.00 39.65 2.12
6313 8889 2.171079 GTGTTGCTGCCGCGCTATA 61.171 57.895 5.56 0.00 39.65 1.31
6314 8890 3.499737 GTGTTGCTGCCGCGCTAT 61.500 61.111 5.56 0.00 39.65 2.97
6318 8894 4.688419 CTTGGTGTTGCTGCCGCG 62.688 66.667 0.00 0.00 39.65 6.46
6333 8920 2.044946 GGCGAAGTGGATGGGCTT 60.045 61.111 0.00 0.00 0.00 4.35
6346 8933 0.105224 TTTGGTCGAGAAAGTGGCGA 59.895 50.000 0.00 0.00 0.00 5.54
6353 8944 0.586319 CGCTTGCTTTGGTCGAGAAA 59.414 50.000 0.00 0.00 0.00 2.52
6356 8947 1.630244 CCTCGCTTGCTTTGGTCGAG 61.630 60.000 0.00 0.00 44.21 4.04
6357 8948 1.667830 CCTCGCTTGCTTTGGTCGA 60.668 57.895 0.00 0.00 0.00 4.20
6358 8949 1.227999 TTCCTCGCTTGCTTTGGTCG 61.228 55.000 0.00 0.00 0.00 4.79
6359 8950 0.519077 CTTCCTCGCTTGCTTTGGTC 59.481 55.000 0.00 0.00 0.00 4.02
6360 8951 0.108585 TCTTCCTCGCTTGCTTTGGT 59.891 50.000 0.00 0.00 0.00 3.67
6361 8952 0.801251 CTCTTCCTCGCTTGCTTTGG 59.199 55.000 0.00 0.00 0.00 3.28
6362 8953 0.801251 CCTCTTCCTCGCTTGCTTTG 59.199 55.000 0.00 0.00 0.00 2.77
6363 8954 0.957888 GCCTCTTCCTCGCTTGCTTT 60.958 55.000 0.00 0.00 0.00 3.51
6364 8955 1.376553 GCCTCTTCCTCGCTTGCTT 60.377 57.895 0.00 0.00 0.00 3.91
6365 8956 2.267324 GCCTCTTCCTCGCTTGCT 59.733 61.111 0.00 0.00 0.00 3.91
6366 8957 2.046892 TGCCTCTTCCTCGCTTGC 60.047 61.111 0.00 0.00 0.00 4.01
6367 8958 2.105466 GCTGCCTCTTCCTCGCTTG 61.105 63.158 0.00 0.00 0.00 4.01
6372 8985 2.124778 GCCTGCTGCCTCTTCCTC 60.125 66.667 0.00 0.00 0.00 3.71
6386 8999 2.170166 CTTCTCTCTCTGTGTCAGCCT 58.830 52.381 0.00 0.00 0.00 4.58
6387 9000 2.094752 GTCTTCTCTCTCTGTGTCAGCC 60.095 54.545 0.00 0.00 0.00 4.85
6491 9108 2.038813 TGGAGAGTCCATGGCCGA 59.961 61.111 6.96 0.00 42.67 5.54
6509 9126 0.105039 GGGCAGTAGATGAACGGAGG 59.895 60.000 0.00 0.00 0.00 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.