Multiple sequence alignment - TraesCS3B01G144200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G144200 chr3B 100.000 5507 0 0 1 5507 132719007 132724513 0.000000e+00 10170.0
1 TraesCS3B01G144200 chr3B 88.095 588 57 9 4924 5506 71218041 71217462 0.000000e+00 686.0
2 TraesCS3B01G144200 chr3B 84.810 79 11 1 4925 5003 698627284 698627207 1.640000e-10 78.7
3 TraesCS3B01G144200 chr3B 83.784 74 11 1 4925 4998 698690462 698690390 9.900000e-08 69.4
4 TraesCS3B01G144200 chr3D 94.230 4194 191 20 583 4731 83829860 83825673 0.000000e+00 6357.0
5 TraesCS3B01G144200 chr3D 85.662 272 38 1 267 537 83830130 83829859 9.030000e-73 285.0
6 TraesCS3B01G144200 chr3D 82.569 109 19 0 418 526 180593337 180593229 4.540000e-16 97.1
7 TraesCS3B01G144200 chr3D 86.567 67 8 1 4722 4788 27936629 27936564 7.650000e-09 73.1
8 TraesCS3B01G144200 chr3D 77.419 124 26 2 430 552 136043559 136043437 7.650000e-09 73.1
9 TraesCS3B01G144200 chr3D 93.750 48 3 0 4743 4790 417211776 417211729 7.650000e-09 73.1
10 TraesCS3B01G144200 chr3A 95.448 3932 123 17 754 4643 99626086 99622169 0.000000e+00 6218.0
11 TraesCS3B01G144200 chr3A 89.391 443 34 9 5067 5504 685814016 685814450 3.750000e-151 545.0
12 TraesCS3B01G144200 chr3A 86.123 454 55 8 5057 5507 131407319 131407767 2.980000e-132 483.0
13 TraesCS3B01G144200 chr3A 84.507 213 30 3 376 586 99628069 99627858 2.010000e-49 207.0
14 TraesCS3B01G144200 chr6B 84.103 585 72 14 4926 5507 71846615 71846049 3.750000e-151 545.0
15 TraesCS3B01G144200 chr7A 91.003 389 29 5 5121 5507 76116342 76115958 2.270000e-143 520.0
16 TraesCS3B01G144200 chr7A 82.119 151 22 3 423 568 375898469 375898619 2.080000e-24 124.0
17 TraesCS3B01G144200 chr7A 79.545 132 24 3 418 547 264338567 264338437 2.110000e-14 91.6
18 TraesCS3B01G144200 chr4D 85.540 491 60 10 5022 5507 338014139 338013655 2.290000e-138 503.0
19 TraesCS3B01G144200 chr4D 84.694 490 61 13 5022 5507 385673897 385674376 1.390000e-130 477.0
20 TraesCS3B01G144200 chr5A 87.215 438 40 13 5071 5506 121421114 121421537 8.290000e-133 484.0
21 TraesCS3B01G144200 chr5A 88.136 59 5 2 4734 4791 382759472 382759529 9.900000e-08 69.4
22 TraesCS3B01G144200 chr2A 84.663 489 63 10 5022 5507 761300081 761300560 1.390000e-130 477.0
23 TraesCS3B01G144200 chr2A 78.912 147 28 3 420 564 122043939 122043794 4.540000e-16 97.1
24 TraesCS3B01G144200 chr7D 81.457 151 22 4 423 568 311863038 311862889 9.690000e-23 119.0
25 TraesCS3B01G144200 chr1D 81.169 154 24 3 418 568 479605518 479605669 9.690000e-23 119.0
26 TraesCS3B01G144200 chr1D 81.538 130 22 2 418 546 459274891 459275019 7.540000e-19 106.0
27 TraesCS3B01G144200 chr6D 81.379 145 26 1 418 561 451892531 451892387 3.490000e-22 117.0
28 TraesCS3B01G144200 chr6D 90.741 54 4 1 4722 4775 7985400 7985348 2.750000e-08 71.3
29 TraesCS3B01G144200 chr1B 79.355 155 22 6 418 567 667828781 667828930 3.510000e-17 100.0
30 TraesCS3B01G144200 chr6A 77.381 168 34 3 418 582 184947076 184946910 4.540000e-16 97.1
31 TraesCS3B01G144200 chr2D 88.889 72 6 2 420 490 129958044 129958114 2.730000e-13 87.9
32 TraesCS3B01G144200 chr2B 92.453 53 3 1 4728 4779 639246820 639246872 2.130000e-09 75.0
33 TraesCS3B01G144200 chr7B 92.157 51 3 1 4725 4775 585509018 585508969 2.750000e-08 71.3
34 TraesCS3B01G144200 chr5D 89.286 56 5 1 4733 4788 447251951 447252005 9.900000e-08 69.4
35 TraesCS3B01G144200 chr5B 87.931 58 7 0 4734 4791 381355204 381355261 9.900000e-08 69.4
36 TraesCS3B01G144200 chr1A 83.333 72 11 1 4722 4793 70977641 70977571 1.280000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G144200 chr3B 132719007 132724513 5506 False 10170.0 10170 100.0000 1 5507 1 chr3B.!!$F1 5506
1 TraesCS3B01G144200 chr3B 71217462 71218041 579 True 686.0 686 88.0950 4924 5506 1 chr3B.!!$R1 582
2 TraesCS3B01G144200 chr3D 83825673 83830130 4457 True 3321.0 6357 89.9460 267 4731 2 chr3D.!!$R5 4464
3 TraesCS3B01G144200 chr3A 99622169 99628069 5900 True 3212.5 6218 89.9775 376 4643 2 chr3A.!!$R1 4267
4 TraesCS3B01G144200 chr6B 71846049 71846615 566 True 545.0 545 84.1030 4926 5507 1 chr6B.!!$R1 581

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
137 138 0.039074 GGCTGGTCCGATCGTGATAG 60.039 60.0 15.09 13.23 0.00 2.08 F
138 139 0.039074 GCTGGTCCGATCGTGATAGG 60.039 60.0 15.09 2.87 35.25 2.57 F
576 578 0.108585 GTGAAGGGGCAACTCAGACA 59.891 55.0 0.00 0.00 42.85 3.41 F
940 2547 0.246635 GTCGCTTCCTAGCCAAGTCA 59.753 55.0 0.00 0.00 44.86 3.41 F
1169 2780 0.389166 CGAGCCGAGCACTTCTTTCT 60.389 55.0 0.00 0.00 0.00 2.52 F
2791 4424 1.074872 GGCGTACGACTACACCAAGC 61.075 60.0 21.65 0.00 0.00 4.01 F
3564 5212 0.036388 ACATCAAGGCGAACACGGAT 60.036 50.0 0.00 0.00 0.00 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1938 3571 1.052617 TCTTGTCGTGGGTGATTGGA 58.947 50.000 0.00 0.00 0.00 3.53 R
1998 3631 2.277437 CGTATGGTGCGCGTCGTA 60.277 61.111 8.43 0.00 0.00 3.43 R
2315 3948 2.640989 CGTCCACCGACTTGTCGA 59.359 61.111 22.54 1.73 39.56 4.20 R
2724 4357 0.249868 CGAACCTGTTCCACAGCTCA 60.250 55.000 4.54 0.00 44.63 4.26 R
3157 4805 0.391597 AACAGGACCGACACGTTCAT 59.608 50.000 0.00 0.00 0.00 2.57 R
4108 5756 0.972983 TAGCTCTTCTTCAGCGGCCT 60.973 55.000 0.00 0.00 42.14 5.19 R
5074 6750 0.042535 GCGATGTAATTTAGCGCGCA 60.043 50.000 35.10 16.82 42.21 6.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 4.839706 GCCCGGGGCCACAATCAT 62.840 66.667 28.23 0.00 44.06 2.45
21 22 2.834505 CCCGGGGCCACAATCATG 60.835 66.667 14.71 0.00 0.00 3.07
22 23 3.530260 CCGGGGCCACAATCATGC 61.530 66.667 5.46 0.00 0.00 4.06
23 24 2.755064 CGGGGCCACAATCATGCA 60.755 61.111 5.46 0.00 0.00 3.96
24 25 2.777972 CGGGGCCACAATCATGCAG 61.778 63.158 5.46 0.00 0.00 4.41
25 26 1.683365 GGGGCCACAATCATGCAGT 60.683 57.895 4.39 0.00 0.00 4.40
26 27 1.259840 GGGGCCACAATCATGCAGTT 61.260 55.000 4.39 0.00 0.00 3.16
27 28 0.609662 GGGCCACAATCATGCAGTTT 59.390 50.000 4.39 0.00 0.00 2.66
28 29 1.824230 GGGCCACAATCATGCAGTTTA 59.176 47.619 4.39 0.00 0.00 2.01
29 30 2.431782 GGGCCACAATCATGCAGTTTAT 59.568 45.455 4.39 0.00 0.00 1.40
30 31 3.118665 GGGCCACAATCATGCAGTTTATT 60.119 43.478 4.39 0.00 0.00 1.40
31 32 4.506758 GGCCACAATCATGCAGTTTATTT 58.493 39.130 0.00 0.00 0.00 1.40
32 33 4.330620 GGCCACAATCATGCAGTTTATTTG 59.669 41.667 0.00 0.00 0.00 2.32
33 34 4.931002 GCCACAATCATGCAGTTTATTTGT 59.069 37.500 0.00 0.00 0.00 2.83
34 35 5.163933 GCCACAATCATGCAGTTTATTTGTG 60.164 40.000 15.22 15.22 0.00 3.33
35 36 5.927689 CCACAATCATGCAGTTTATTTGTGT 59.072 36.000 18.23 1.37 0.00 3.72
36 37 6.089820 CCACAATCATGCAGTTTATTTGTGTC 59.910 38.462 18.23 0.00 0.00 3.67
37 38 6.641723 CACAATCATGCAGTTTATTTGTGTCA 59.358 34.615 14.48 0.00 0.00 3.58
38 39 6.642131 ACAATCATGCAGTTTATTTGTGTCAC 59.358 34.615 0.00 0.00 0.00 3.67
39 40 4.782156 TCATGCAGTTTATTTGTGTCACG 58.218 39.130 0.00 0.00 0.00 4.35
40 41 2.993545 TGCAGTTTATTTGTGTCACGC 58.006 42.857 0.00 0.00 0.00 5.34
41 42 2.616376 TGCAGTTTATTTGTGTCACGCT 59.384 40.909 0.00 0.00 0.00 5.07
42 43 3.226347 GCAGTTTATTTGTGTCACGCTC 58.774 45.455 0.00 0.00 0.00 5.03
43 44 3.303725 GCAGTTTATTTGTGTCACGCTCA 60.304 43.478 0.00 0.00 0.00 4.26
44 45 4.211389 CAGTTTATTTGTGTCACGCTCAC 58.789 43.478 0.00 0.00 36.48 3.51
45 46 3.874543 AGTTTATTTGTGTCACGCTCACA 59.125 39.130 0.00 4.26 42.84 3.58
46 47 4.515191 AGTTTATTTGTGTCACGCTCACAT 59.485 37.500 8.32 0.00 43.74 3.21
47 48 2.975410 ATTTGTGTCACGCTCACATG 57.025 45.000 8.32 0.00 43.74 3.21
48 49 0.307453 TTTGTGTCACGCTCACATGC 59.693 50.000 8.32 0.00 43.74 4.06
59 60 3.159070 CACATGCGGTGTCTCGTG 58.841 61.111 0.00 0.00 42.75 4.35
60 61 1.664649 CACATGCGGTGTCTCGTGT 60.665 57.895 0.00 0.00 42.75 4.49
61 62 1.069090 ACATGCGGTGTCTCGTGTT 59.931 52.632 0.00 0.00 35.77 3.32
62 63 1.221466 ACATGCGGTGTCTCGTGTTG 61.221 55.000 0.00 0.00 35.77 3.33
63 64 2.317609 ATGCGGTGTCTCGTGTTGC 61.318 57.895 0.00 0.00 0.00 4.17
64 65 3.712881 GCGGTGTCTCGTGTTGCC 61.713 66.667 0.00 0.00 0.00 4.52
65 66 2.029073 CGGTGTCTCGTGTTGCCT 59.971 61.111 0.00 0.00 0.00 4.75
66 67 2.022129 CGGTGTCTCGTGTTGCCTC 61.022 63.158 0.00 0.00 0.00 4.70
67 68 1.069090 GGTGTCTCGTGTTGCCTCA 59.931 57.895 0.00 0.00 0.00 3.86
68 69 1.222115 GGTGTCTCGTGTTGCCTCAC 61.222 60.000 0.00 0.00 35.28 3.51
89 90 3.706140 CGATGGCGTTGCTAGACC 58.294 61.111 0.00 0.00 0.00 3.85
90 91 1.883084 CGATGGCGTTGCTAGACCC 60.883 63.158 0.00 0.00 0.00 4.46
91 92 1.883084 GATGGCGTTGCTAGACCCG 60.883 63.158 0.00 0.00 0.00 5.28
92 93 4.752879 TGGCGTTGCTAGACCCGC 62.753 66.667 10.66 10.66 45.05 6.13
94 95 4.452733 GCGTTGCTAGACCCGCCT 62.453 66.667 8.58 0.00 40.25 5.52
95 96 2.509336 CGTTGCTAGACCCGCCTG 60.509 66.667 0.00 0.00 0.00 4.85
96 97 2.663196 GTTGCTAGACCCGCCTGT 59.337 61.111 0.00 0.00 0.00 4.00
97 98 1.448013 GTTGCTAGACCCGCCTGTC 60.448 63.158 0.00 0.00 35.43 3.51
98 99 3.001902 TTGCTAGACCCGCCTGTCG 62.002 63.158 0.00 0.00 40.26 4.35
134 135 3.458163 GGGCTGGTCCGATCGTGA 61.458 66.667 15.09 8.26 34.94 4.35
135 136 2.797278 GGGCTGGTCCGATCGTGAT 61.797 63.158 15.09 0.00 34.94 3.06
136 137 1.461091 GGGCTGGTCCGATCGTGATA 61.461 60.000 15.09 4.32 34.94 2.15
137 138 0.039074 GGCTGGTCCGATCGTGATAG 60.039 60.000 15.09 13.23 0.00 2.08
138 139 0.039074 GCTGGTCCGATCGTGATAGG 60.039 60.000 15.09 2.87 35.25 2.57
139 140 1.605753 CTGGTCCGATCGTGATAGGA 58.394 55.000 15.09 7.51 39.74 2.94
140 141 1.954382 CTGGTCCGATCGTGATAGGAA 59.046 52.381 15.09 0.00 42.82 3.36
141 142 2.361119 CTGGTCCGATCGTGATAGGAAA 59.639 50.000 15.09 4.84 42.82 3.13
142 143 2.100252 TGGTCCGATCGTGATAGGAAAC 59.900 50.000 15.09 9.66 42.82 2.78
143 144 2.382519 GTCCGATCGTGATAGGAAACG 58.617 52.381 15.09 0.00 42.82 3.60
144 145 2.019249 TCCGATCGTGATAGGAAACGT 58.981 47.619 15.09 0.00 39.22 3.99
145 146 2.117137 CCGATCGTGATAGGAAACGTG 58.883 52.381 15.09 0.00 40.61 4.49
146 147 2.479049 CCGATCGTGATAGGAAACGTGT 60.479 50.000 15.09 0.00 40.61 4.49
147 148 2.530297 CGATCGTGATAGGAAACGTGTG 59.470 50.000 7.03 0.00 40.61 3.82
148 149 3.508762 GATCGTGATAGGAAACGTGTGT 58.491 45.455 0.00 0.00 40.61 3.72
149 150 2.668250 TCGTGATAGGAAACGTGTGTG 58.332 47.619 0.00 0.00 40.61 3.82
150 151 1.126113 CGTGATAGGAAACGTGTGTGC 59.874 52.381 0.00 0.00 35.13 4.57
151 152 2.413837 GTGATAGGAAACGTGTGTGCT 58.586 47.619 0.00 0.00 0.00 4.40
152 153 2.157668 GTGATAGGAAACGTGTGTGCTG 59.842 50.000 0.00 0.00 0.00 4.41
153 154 1.128692 GATAGGAAACGTGTGTGCTGC 59.871 52.381 0.00 0.00 0.00 5.25
154 155 1.218875 TAGGAAACGTGTGTGCTGCG 61.219 55.000 0.00 0.00 0.00 5.18
155 156 2.722188 GAAACGTGTGTGCTGCGC 60.722 61.111 6.19 6.19 0.00 6.09
156 157 4.250431 AAACGTGTGTGCTGCGCC 62.250 61.111 11.12 2.83 0.00 6.53
190 191 3.345808 CGTGTGGGCCGTTGTCAG 61.346 66.667 0.00 0.00 0.00 3.51
191 192 2.978010 GTGTGGGCCGTTGTCAGG 60.978 66.667 0.00 0.00 0.00 3.86
198 199 2.654877 CCGTTGTCAGGCCTACGT 59.345 61.111 21.16 0.00 32.45 3.57
199 200 1.736645 CCGTTGTCAGGCCTACGTG 60.737 63.158 21.16 11.11 32.45 4.49
200 201 1.287815 CGTTGTCAGGCCTACGTGA 59.712 57.895 16.11 2.95 38.32 4.35
201 202 0.732880 CGTTGTCAGGCCTACGTGAG 60.733 60.000 16.11 0.00 41.12 3.51
202 203 1.014564 GTTGTCAGGCCTACGTGAGC 61.015 60.000 3.98 0.00 41.12 4.26
208 209 4.509737 GCCTACGTGAGCCGGGAC 62.510 72.222 2.18 0.00 42.24 4.46
209 210 3.834799 CCTACGTGAGCCGGGACC 61.835 72.222 2.18 0.00 42.24 4.46
210 211 3.834799 CTACGTGAGCCGGGACCC 61.835 72.222 2.18 0.00 42.24 4.46
211 212 4.371417 TACGTGAGCCGGGACCCT 62.371 66.667 9.41 0.00 42.24 4.34
212 213 3.892104 TACGTGAGCCGGGACCCTT 62.892 63.158 9.41 0.00 42.24 3.95
213 214 4.452733 CGTGAGCCGGGACCCTTC 62.453 72.222 9.41 4.33 0.00 3.46
214 215 3.003763 GTGAGCCGGGACCCTTCT 61.004 66.667 9.41 4.95 0.00 2.85
215 216 3.003173 TGAGCCGGGACCCTTCTG 61.003 66.667 9.41 0.00 0.00 3.02
216 217 3.003763 GAGCCGGGACCCTTCTGT 61.004 66.667 9.41 0.00 0.00 3.41
217 218 3.003763 AGCCGGGACCCTTCTGTC 61.004 66.667 9.41 0.00 34.42 3.51
218 219 4.452733 GCCGGGACCCTTCTGTCG 62.453 72.222 9.41 0.00 36.07 4.35
219 220 3.771160 CCGGGACCCTTCTGTCGG 61.771 72.222 9.41 0.00 36.07 4.79
220 221 4.452733 CGGGACCCTTCTGTCGGC 62.453 72.222 9.41 0.00 36.07 5.54
221 222 4.452733 GGGACCCTTCTGTCGGCG 62.453 72.222 2.09 0.00 36.07 6.46
222 223 3.692406 GGACCCTTCTGTCGGCGT 61.692 66.667 6.85 0.00 36.07 5.68
223 224 2.126031 GACCCTTCTGTCGGCGTC 60.126 66.667 6.85 0.72 0.00 5.19
224 225 3.644399 GACCCTTCTGTCGGCGTCC 62.644 68.421 6.85 0.00 0.00 4.79
225 226 3.382832 CCCTTCTGTCGGCGTCCT 61.383 66.667 6.85 0.00 0.00 3.85
226 227 2.182030 CCTTCTGTCGGCGTCCTC 59.818 66.667 6.85 0.00 0.00 3.71
227 228 2.202492 CTTCTGTCGGCGTCCTCG 60.202 66.667 6.85 0.00 40.37 4.63
248 249 4.363990 CGCGTGCCACTCTGACCT 62.364 66.667 0.00 0.00 0.00 3.85
249 250 2.740055 GCGTGCCACTCTGACCTG 60.740 66.667 0.00 0.00 0.00 4.00
250 251 2.047844 CGTGCCACTCTGACCTGG 60.048 66.667 0.00 0.00 0.00 4.45
254 255 2.667418 CCACTCTGACCTGGCTGG 59.333 66.667 9.11 9.11 42.93 4.85
255 256 2.667418 CACTCTGACCTGGCTGGG 59.333 66.667 15.36 5.47 41.11 4.45
256 257 2.205462 ACTCTGACCTGGCTGGGT 59.795 61.111 15.36 8.85 43.07 4.51
257 258 1.462238 ACTCTGACCTGGCTGGGTT 60.462 57.895 15.36 0.00 40.06 4.11
258 259 1.002868 CTCTGACCTGGCTGGGTTG 60.003 63.158 15.36 4.19 40.06 3.77
259 260 2.674380 CTGACCTGGCTGGGTTGC 60.674 66.667 15.36 2.11 40.06 4.17
260 261 3.496309 CTGACCTGGCTGGGTTGCA 62.496 63.158 15.36 6.40 40.06 4.08
261 262 2.203480 GACCTGGCTGGGTTGCAA 60.203 61.111 15.36 0.00 40.06 4.08
262 263 2.521708 ACCTGGCTGGGTTGCAAC 60.522 61.111 21.59 21.59 41.11 4.17
263 264 2.521465 CCTGGCTGGGTTGCAACA 60.521 61.111 29.55 10.63 34.04 3.33
264 265 2.567497 CCTGGCTGGGTTGCAACAG 61.567 63.158 29.55 20.23 37.76 3.16
265 266 2.521465 TGGCTGGGTTGCAACAGG 60.521 61.111 29.55 18.83 35.30 4.00
336 337 1.376812 CCCTCTACGGTGGGTTTGC 60.377 63.158 0.00 0.00 40.39 3.68
339 340 1.005867 TCTACGGTGGGTTTGCGTC 60.006 57.895 0.00 0.00 0.00 5.19
342 343 4.007940 CGGTGGGTTTGCGTCACG 62.008 66.667 0.00 0.00 32.65 4.35
368 369 4.535425 CGTCTTCTCGCTCGTTGT 57.465 55.556 0.00 0.00 0.00 3.32
372 373 1.664649 CTTCTCGCTCGTTGTGCCA 60.665 57.895 0.00 0.00 0.00 4.92
373 374 1.005037 TTCTCGCTCGTTGTGCCAT 60.005 52.632 0.00 0.00 0.00 4.40
374 375 1.291184 TTCTCGCTCGTTGTGCCATG 61.291 55.000 0.00 0.00 0.00 3.66
394 395 2.122167 GTGAGAGGGCGAGACGGAT 61.122 63.158 0.00 0.00 0.00 4.18
396 397 2.899044 GAGAGGGCGAGACGGATCG 61.899 68.421 7.12 7.12 45.48 3.69
452 453 4.580167 GGGCATTCATAGTGTTGCAAGATA 59.420 41.667 0.00 0.00 36.82 1.98
459 460 6.049149 TCATAGTGTTGCAAGATAGTTAGGC 58.951 40.000 0.00 0.00 0.00 3.93
491 492 2.231964 GGAGCTGCAATGATGTGGAAAA 59.768 45.455 0.00 0.00 0.00 2.29
504 505 5.296780 TGATGTGGAAAACAGAGACTTTGTC 59.703 40.000 0.00 0.00 43.64 3.18
513 514 3.827302 ACAGAGACTTTGTCGTAGGTGAT 59.173 43.478 0.00 0.00 37.67 3.06
549 551 4.154737 CACTTCCACAACATGATTGTCGAT 59.845 41.667 0.00 0.00 34.06 3.59
571 573 1.941325 CGATAGTGAAGGGGCAACTC 58.059 55.000 0.00 0.00 37.29 3.01
573 575 2.739932 CGATAGTGAAGGGGCAACTCAG 60.740 54.545 0.00 0.00 42.85 3.35
576 578 0.108585 GTGAAGGGGCAACTCAGACA 59.891 55.000 0.00 0.00 42.85 3.41
582 584 1.545428 GGGGCAACTCAGACACATGAA 60.545 52.381 0.00 0.00 36.63 2.57
586 588 4.262164 GGGCAACTCAGACACATGAAATTT 60.262 41.667 0.00 0.00 0.00 1.82
587 589 5.291971 GGCAACTCAGACACATGAAATTTT 58.708 37.500 0.00 0.00 0.00 1.82
588 590 5.754890 GGCAACTCAGACACATGAAATTTTT 59.245 36.000 0.00 0.00 0.00 1.94
624 905 6.681729 AGGGTTTTAGTATGAGAAGTGTGA 57.318 37.500 0.00 0.00 0.00 3.58
628 909 7.152645 GGTTTTAGTATGAGAAGTGTGACTGA 58.847 38.462 0.00 0.00 0.00 3.41
629 910 7.819900 GGTTTTAGTATGAGAAGTGTGACTGAT 59.180 37.037 0.00 0.00 0.00 2.90
635 916 7.918033 AGTATGAGAAGTGTGACTGATTAATCG 59.082 37.037 10.80 8.09 0.00 3.34
643 924 7.743104 AGTGTGACTGATTAATCGAACATTTC 58.257 34.615 10.80 2.23 0.00 2.17
647 928 6.316140 TGACTGATTAATCGAACATTTCAGGG 59.684 38.462 10.80 0.02 34.78 4.45
648 929 6.180472 ACTGATTAATCGAACATTTCAGGGT 58.820 36.000 10.80 0.47 34.78 4.34
650 931 7.827236 ACTGATTAATCGAACATTTCAGGGTTA 59.173 33.333 10.80 0.00 34.78 2.85
652 933 6.746745 TTAATCGAACATTTCAGGGTTACC 57.253 37.500 0.00 0.00 0.00 2.85
667 950 0.736672 TTACCTGCGCGCGTCAAATA 60.737 50.000 32.35 19.02 0.00 1.40
674 957 1.659211 GCGCGCGTCAAATATTTAGGG 60.659 52.381 32.35 5.48 0.00 3.53
677 960 2.032290 GCGCGTCAAATATTTAGGGGTC 60.032 50.000 8.43 0.00 0.00 4.46
686 969 6.544564 TCAAATATTTAGGGGTCGGATTTGTC 59.455 38.462 0.00 0.00 35.38 3.18
717 1045 0.874390 GCCGATGCTCTGAAAACACA 59.126 50.000 0.00 0.00 33.53 3.72
718 1046 1.135859 GCCGATGCTCTGAAAACACAG 60.136 52.381 0.00 0.00 39.02 3.66
722 1052 3.438087 CGATGCTCTGAAAACACAGGAAT 59.562 43.478 0.00 0.00 38.31 3.01
747 1077 4.633565 CAGAGTAAATTTCTCCACCTCAGC 59.366 45.833 0.00 0.00 32.93 4.26
750 1080 0.678048 AATTTCTCCACCTCAGCGGC 60.678 55.000 0.00 0.00 35.61 6.53
920 2527 4.310769 CAGTCTGTAACCTCTGTTTCTGG 58.689 47.826 0.00 0.00 35.87 3.86
940 2547 0.246635 GTCGCTTCCTAGCCAAGTCA 59.753 55.000 0.00 0.00 44.86 3.41
1128 2739 2.651232 GCACGGCGTACTAGAGCG 60.651 66.667 14.22 0.00 0.00 5.03
1169 2780 0.389166 CGAGCCGAGCACTTCTTTCT 60.389 55.000 0.00 0.00 0.00 2.52
1206 2839 6.183360 GGAGAAATTTCTATGTTCTGGTCAGC 60.183 42.308 20.51 3.30 37.73 4.26
1506 3139 4.496336 GCCCTCATGCCGGAGCTT 62.496 66.667 5.05 0.00 40.80 3.74
1515 3148 2.101233 GCCGGAGCTTTCCTTCGTC 61.101 63.158 5.05 0.00 41.13 4.20
1698 3331 4.295119 AACGTCAGCGGCGTCCTT 62.295 61.111 9.37 0.00 42.10 3.36
1701 3334 4.681978 GTCAGCGGCGTCCTTGGT 62.682 66.667 9.37 0.00 0.00 3.67
1704 3337 3.307906 AGCGGCGTCCTTGGTGTA 61.308 61.111 9.37 0.00 0.00 2.90
1938 3571 1.898574 CCGCAACAACTTCCAGCCT 60.899 57.895 0.00 0.00 0.00 4.58
1998 3631 4.988598 CCCACCACGCTGACGCTT 62.989 66.667 0.00 0.00 45.53 4.68
2013 3646 1.874915 GCTTACGACGCGCACCATA 60.875 57.895 5.73 0.00 0.00 2.74
2042 3675 3.716006 CACGAGCACCAACGGCAG 61.716 66.667 0.00 0.00 0.00 4.85
2046 3679 3.825160 GAGCACCAACGGCAGGTCA 62.825 63.158 0.00 0.00 37.23 4.02
2469 4102 2.203728 TGGGAGCACCGGTACACT 60.204 61.111 6.87 4.97 44.64 3.55
2472 4105 2.434359 GAGCACCGGTACACTGCC 60.434 66.667 6.87 0.00 31.44 4.85
2791 4424 1.074872 GGCGTACGACTACACCAAGC 61.075 60.000 21.65 0.00 0.00 4.01
2877 4510 1.790090 CTCTGCTGAGCTATCCGCGA 61.790 60.000 8.23 0.00 45.59 5.87
2934 4567 2.418910 CGACGAGCTCACCCTCCAT 61.419 63.158 15.40 0.00 0.00 3.41
3070 4703 1.606668 GCACGGATGGACTTGACAAAA 59.393 47.619 0.00 0.00 0.00 2.44
3114 4762 4.117661 GCGAGGGCGACGTCTCTT 62.118 66.667 14.70 1.92 42.98 2.85
3157 4805 3.352748 TCTCCGGGAGCCCCTACA 61.353 66.667 19.48 0.00 42.67 2.74
3170 4818 0.245539 CCCTACATGAACGTGTCGGT 59.754 55.000 13.85 0.00 34.16 4.69
3564 5212 0.036388 ACATCAAGGCGAACACGGAT 60.036 50.000 0.00 0.00 0.00 4.18
3789 5437 2.282958 TTCCTCCTGACGCTCCGT 60.283 61.111 0.00 0.00 45.10 4.69
4071 5719 2.610282 GGACTTCTTCCTCCTCCCC 58.390 63.158 0.00 0.00 41.95 4.81
4080 5728 3.011517 CTCCTCCCCCAGGTGGTG 61.012 72.222 0.00 0.00 45.58 4.17
4089 5737 2.428187 CAGGTGGTGGGCAACGTA 59.572 61.111 0.00 0.00 37.60 3.57
4323 5971 3.777925 GTGTACGTGCAGCAGCGG 61.778 66.667 6.58 4.77 46.23 5.52
4446 6094 2.437180 TTCGAGGCCGAGCTCGTA 60.437 61.111 32.41 9.54 46.39 3.43
4455 6103 2.353607 GAGCTCGTATCCGGCGTG 60.354 66.667 6.01 0.00 36.03 5.34
4529 6178 3.438297 AACATATCGGACGGTTCTCTG 57.562 47.619 0.00 0.00 0.00 3.35
4530 6179 2.376109 ACATATCGGACGGTTCTCTGT 58.624 47.619 0.00 0.00 35.66 3.41
4531 6180 3.548770 ACATATCGGACGGTTCTCTGTA 58.451 45.455 0.00 0.00 32.75 2.74
4532 6181 3.564644 ACATATCGGACGGTTCTCTGTAG 59.435 47.826 0.00 0.00 32.75 2.74
4533 6182 1.390565 ATCGGACGGTTCTCTGTAGG 58.609 55.000 0.00 0.00 32.75 3.18
4534 6183 1.139095 CGGACGGTTCTCTGTAGGC 59.861 63.158 0.00 0.00 32.75 3.93
4535 6184 1.516423 GGACGGTTCTCTGTAGGCC 59.484 63.158 0.00 0.00 32.75 5.19
4536 6185 0.971447 GGACGGTTCTCTGTAGGCCT 60.971 60.000 11.78 11.78 32.75 5.19
4537 6186 0.456628 GACGGTTCTCTGTAGGCCTC 59.543 60.000 9.68 1.02 32.75 4.70
4538 6187 0.971447 ACGGTTCTCTGTAGGCCTCC 60.971 60.000 9.68 0.00 0.00 4.30
4539 6188 1.677637 CGGTTCTCTGTAGGCCTCCC 61.678 65.000 9.68 0.82 0.00 4.30
4634 6302 4.825546 AGTTTCACACATCTTTGAGCTG 57.174 40.909 0.00 0.00 0.00 4.24
4646 6314 4.973168 TCTTTGAGCTGTACTCCATTTGT 58.027 39.130 0.00 0.00 45.61 2.83
4649 6317 2.038952 TGAGCTGTACTCCATTTGTGCT 59.961 45.455 0.00 0.00 45.61 4.40
4651 6319 3.600388 AGCTGTACTCCATTTGTGCTAC 58.400 45.455 0.00 0.00 0.00 3.58
4653 6321 4.466370 AGCTGTACTCCATTTGTGCTACTA 59.534 41.667 0.00 0.00 0.00 1.82
4654 6322 5.046591 AGCTGTACTCCATTTGTGCTACTAA 60.047 40.000 0.00 0.00 0.00 2.24
4655 6323 5.817816 GCTGTACTCCATTTGTGCTACTAAT 59.182 40.000 0.00 0.00 0.00 1.73
4657 6325 7.657761 GCTGTACTCCATTTGTGCTACTAATAT 59.342 37.037 0.00 0.00 0.00 1.28
4659 6327 8.700973 TGTACTCCATTTGTGCTACTAATATCA 58.299 33.333 0.00 0.00 0.00 2.15
4660 6328 9.197694 GTACTCCATTTGTGCTACTAATATCAG 57.802 37.037 0.00 0.00 0.00 2.90
4661 6329 7.796054 ACTCCATTTGTGCTACTAATATCAGT 58.204 34.615 0.00 0.00 0.00 3.41
4662 6330 7.928706 ACTCCATTTGTGCTACTAATATCAGTC 59.071 37.037 0.00 0.00 0.00 3.51
4663 6331 7.791029 TCCATTTGTGCTACTAATATCAGTCA 58.209 34.615 0.00 0.00 0.00 3.41
4664 6332 7.710907 TCCATTTGTGCTACTAATATCAGTCAC 59.289 37.037 0.00 0.00 0.00 3.67
4680 6353 5.903810 TCAGTCACATTCTCTGATCATCAG 58.096 41.667 8.54 8.54 45.59 2.90
4687 6360 6.370718 CACATTCTCTGATCATCAGTGACAAA 59.629 38.462 17.26 5.64 43.90 2.83
4698 6371 9.160496 GATCATCAGTGACAAAAACTCTAGAAT 57.840 33.333 0.00 0.00 37.14 2.40
4701 6374 7.496529 TCAGTGACAAAAACTCTAGAATTGG 57.503 36.000 0.00 0.00 0.00 3.16
4718 6391 2.432628 GTGGCTCCAGAACCGTCG 60.433 66.667 0.00 0.00 0.00 5.12
4720 6393 2.432628 GGCTCCAGAACCGTCGTG 60.433 66.667 0.00 0.00 0.00 4.35
4731 6404 2.805277 CCGTCGTGGTGTTGAGTAC 58.195 57.895 0.00 0.00 0.00 2.73
4732 6405 0.313043 CCGTCGTGGTGTTGAGTACT 59.687 55.000 0.00 0.00 0.00 2.73
4733 6406 1.536766 CCGTCGTGGTGTTGAGTACTA 59.463 52.381 0.00 0.00 0.00 1.82
4734 6407 2.578495 CGTCGTGGTGTTGAGTACTAC 58.422 52.381 0.00 0.00 0.00 2.73
4735 6408 2.225019 CGTCGTGGTGTTGAGTACTACT 59.775 50.000 0.00 0.00 0.00 2.57
4736 6409 3.433274 CGTCGTGGTGTTGAGTACTACTA 59.567 47.826 0.00 0.00 0.00 1.82
4737 6410 4.435253 CGTCGTGGTGTTGAGTACTACTAG 60.435 50.000 0.00 0.00 0.00 2.57
4738 6411 4.453819 GTCGTGGTGTTGAGTACTACTAGT 59.546 45.833 0.00 0.00 0.00 2.57
4739 6412 4.453478 TCGTGGTGTTGAGTACTACTAGTG 59.547 45.833 5.39 0.00 0.00 2.74
4740 6413 4.214971 CGTGGTGTTGAGTACTACTAGTGT 59.785 45.833 5.39 4.48 0.00 3.55
4741 6414 5.409520 CGTGGTGTTGAGTACTACTAGTGTA 59.590 44.000 5.39 3.47 0.00 2.90
4757 6430 7.889873 ACTAGTGTAGTGATCTAAATGCTCT 57.110 36.000 0.00 0.00 37.69 4.09
4758 6431 8.299990 ACTAGTGTAGTGATCTAAATGCTCTT 57.700 34.615 0.00 0.00 37.69 2.85
4759 6432 9.409918 ACTAGTGTAGTGATCTAAATGCTCTTA 57.590 33.333 0.00 0.00 37.69 2.10
4806 6479 8.850454 ATTTATTTGTACACCGTAAATGATGC 57.150 30.769 14.03 0.00 0.00 3.91
4807 6480 4.688511 TTTGTACACCGTAAATGATGCC 57.311 40.909 0.00 0.00 0.00 4.40
4808 6481 2.272678 TGTACACCGTAAATGATGCCG 58.727 47.619 0.00 0.00 0.00 5.69
4809 6482 2.094130 TGTACACCGTAAATGATGCCGA 60.094 45.455 0.00 0.00 0.00 5.54
4810 6483 2.325583 ACACCGTAAATGATGCCGAT 57.674 45.000 0.00 0.00 0.00 4.18
4811 6484 3.462483 ACACCGTAAATGATGCCGATA 57.538 42.857 0.00 0.00 0.00 2.92
4812 6485 3.128349 ACACCGTAAATGATGCCGATAC 58.872 45.455 0.00 0.00 0.00 2.24
4813 6486 2.154963 CACCGTAAATGATGCCGATACG 59.845 50.000 0.00 0.00 39.11 3.06
4814 6487 1.126113 CCGTAAATGATGCCGATACGC 59.874 52.381 0.00 0.00 38.33 4.42
4815 6488 1.790043 CGTAAATGATGCCGATACGCA 59.210 47.619 0.00 0.00 44.35 5.24
4821 6494 3.503363 AATGATGCCGATACGCATGATTT 59.497 39.130 0.00 0.00 46.60 2.17
4822 6495 4.022935 AATGATGCCGATACGCATGATTTT 60.023 37.500 0.00 0.00 46.60 1.82
4823 6496 2.753989 TGCCGATACGCATGATTTTG 57.246 45.000 0.00 0.00 32.62 2.44
4824 6497 1.333308 TGCCGATACGCATGATTTTGG 59.667 47.619 0.00 0.00 32.62 3.28
4825 6498 1.601903 GCCGATACGCATGATTTTGGA 59.398 47.619 0.00 0.00 0.00 3.53
4826 6499 2.226437 GCCGATACGCATGATTTTGGAT 59.774 45.455 0.00 0.00 0.00 3.41
4827 6500 3.304659 GCCGATACGCATGATTTTGGATT 60.305 43.478 0.00 0.00 0.00 3.01
4828 6501 4.792704 GCCGATACGCATGATTTTGGATTT 60.793 41.667 0.00 0.00 0.00 2.17
4829 6502 4.676471 CCGATACGCATGATTTTGGATTTG 59.324 41.667 0.00 0.00 0.00 2.32
4830 6503 4.146961 CGATACGCATGATTTTGGATTTGC 59.853 41.667 0.00 0.00 0.00 3.68
4831 6504 3.316071 ACGCATGATTTTGGATTTGCA 57.684 38.095 0.00 0.00 0.00 4.08
4832 6505 3.661944 ACGCATGATTTTGGATTTGCAA 58.338 36.364 0.00 0.00 0.00 4.08
4833 6506 4.255301 ACGCATGATTTTGGATTTGCAAT 58.745 34.783 0.00 0.00 0.00 3.56
4834 6507 4.093703 ACGCATGATTTTGGATTTGCAATG 59.906 37.500 0.00 0.00 0.00 2.82
4835 6508 4.330347 CGCATGATTTTGGATTTGCAATGA 59.670 37.500 0.00 0.00 0.00 2.57
4836 6509 5.007234 CGCATGATTTTGGATTTGCAATGAT 59.993 36.000 0.00 0.00 0.00 2.45
4837 6510 6.427150 GCATGATTTTGGATTTGCAATGATC 58.573 36.000 0.00 0.61 0.00 2.92
4838 6511 6.260050 GCATGATTTTGGATTTGCAATGATCT 59.740 34.615 0.00 0.00 0.00 2.75
4839 6512 7.201696 GCATGATTTTGGATTTGCAATGATCTT 60.202 33.333 0.00 0.00 0.00 2.40
4840 6513 7.603963 TGATTTTGGATTTGCAATGATCTTG 57.396 32.000 0.00 0.00 0.00 3.02
4841 6514 5.866335 TTTTGGATTTGCAATGATCTTGC 57.134 34.783 17.68 17.68 45.11 4.01
4842 6515 4.811969 TTGGATTTGCAATGATCTTGCT 57.188 36.364 22.12 9.34 45.13 3.91
4843 6516 4.811969 TGGATTTGCAATGATCTTGCTT 57.188 36.364 22.12 12.33 45.13 3.91
4844 6517 5.918426 TGGATTTGCAATGATCTTGCTTA 57.082 34.783 22.12 14.27 45.13 3.09
4845 6518 6.283544 TGGATTTGCAATGATCTTGCTTAA 57.716 33.333 22.12 17.73 45.13 1.85
4846 6519 6.880484 TGGATTTGCAATGATCTTGCTTAAT 58.120 32.000 22.12 20.13 45.13 1.40
4847 6520 6.982141 TGGATTTGCAATGATCTTGCTTAATC 59.018 34.615 25.08 25.08 45.13 1.75
4848 6521 6.982141 GGATTTGCAATGATCTTGCTTAATCA 59.018 34.615 28.44 14.12 45.13 2.57
4849 6522 7.042925 GGATTTGCAATGATCTTGCTTAATCAC 60.043 37.037 28.44 22.29 45.13 3.06
4850 6523 4.912214 TGCAATGATCTTGCTTAATCACG 58.088 39.130 22.12 0.00 45.13 4.35
4851 6524 4.395854 TGCAATGATCTTGCTTAATCACGT 59.604 37.500 22.12 0.00 45.13 4.49
4852 6525 4.731961 GCAATGATCTTGCTTAATCACGTG 59.268 41.667 9.94 9.94 41.87 4.49
4853 6526 5.447683 GCAATGATCTTGCTTAATCACGTGA 60.448 40.000 22.48 22.48 41.87 4.35
4854 6527 5.725110 ATGATCTTGCTTAATCACGTGAC 57.275 39.130 22.71 8.37 34.88 3.67
4855 6528 4.565022 TGATCTTGCTTAATCACGTGACA 58.435 39.130 22.71 11.25 0.00 3.58
4856 6529 4.994217 TGATCTTGCTTAATCACGTGACAA 59.006 37.500 22.71 18.12 0.00 3.18
4857 6530 4.725556 TCTTGCTTAATCACGTGACAAC 57.274 40.909 22.71 9.52 0.00 3.32
4858 6531 3.496884 TCTTGCTTAATCACGTGACAACC 59.503 43.478 22.71 9.91 0.00 3.77
4859 6532 2.147958 TGCTTAATCACGTGACAACCC 58.852 47.619 22.71 10.19 0.00 4.11
4860 6533 2.224426 TGCTTAATCACGTGACAACCCT 60.224 45.455 22.71 0.00 0.00 4.34
4861 6534 3.007074 TGCTTAATCACGTGACAACCCTA 59.993 43.478 22.71 2.13 0.00 3.53
4862 6535 4.189231 GCTTAATCACGTGACAACCCTAT 58.811 43.478 22.71 0.00 0.00 2.57
4863 6536 4.634443 GCTTAATCACGTGACAACCCTATT 59.366 41.667 22.71 11.11 0.00 1.73
4864 6537 5.447279 GCTTAATCACGTGACAACCCTATTG 60.447 44.000 22.71 5.60 0.00 1.90
4865 6538 3.973206 ATCACGTGACAACCCTATTGA 57.027 42.857 22.71 0.00 0.00 2.57
4866 6539 3.313012 TCACGTGACAACCCTATTGAG 57.687 47.619 15.76 0.00 0.00 3.02
4867 6540 1.732259 CACGTGACAACCCTATTGAGC 59.268 52.381 10.90 0.00 0.00 4.26
4868 6541 1.623811 ACGTGACAACCCTATTGAGCT 59.376 47.619 0.00 0.00 0.00 4.09
4869 6542 2.038557 ACGTGACAACCCTATTGAGCTT 59.961 45.455 0.00 0.00 0.00 3.74
4870 6543 2.416547 CGTGACAACCCTATTGAGCTTG 59.583 50.000 0.00 0.00 0.00 4.01
4871 6544 3.412386 GTGACAACCCTATTGAGCTTGT 58.588 45.455 0.00 0.00 0.00 3.16
4872 6545 4.575885 GTGACAACCCTATTGAGCTTGTA 58.424 43.478 0.00 0.00 0.00 2.41
4873 6546 4.392138 GTGACAACCCTATTGAGCTTGTAC 59.608 45.833 0.00 0.00 0.00 2.90
4874 6547 4.286032 TGACAACCCTATTGAGCTTGTACT 59.714 41.667 0.00 0.00 0.00 2.73
4875 6548 4.579869 ACAACCCTATTGAGCTTGTACTG 58.420 43.478 0.00 0.00 0.00 2.74
4876 6549 3.268023 ACCCTATTGAGCTTGTACTGC 57.732 47.619 0.00 0.00 0.00 4.40
4877 6550 2.571653 ACCCTATTGAGCTTGTACTGCA 59.428 45.455 12.49 0.00 0.00 4.41
4878 6551 3.200825 ACCCTATTGAGCTTGTACTGCAT 59.799 43.478 12.49 2.48 0.00 3.96
4879 6552 4.408921 ACCCTATTGAGCTTGTACTGCATA 59.591 41.667 12.49 3.32 0.00 3.14
4880 6553 4.993584 CCCTATTGAGCTTGTACTGCATAG 59.006 45.833 12.49 10.31 0.00 2.23
4881 6554 5.453903 CCCTATTGAGCTTGTACTGCATAGT 60.454 44.000 12.49 0.00 40.99 2.12
4882 6555 6.051717 CCTATTGAGCTTGTACTGCATAGTT 58.948 40.000 12.49 0.00 38.36 2.24
4883 6556 7.210174 CCTATTGAGCTTGTACTGCATAGTTA 58.790 38.462 12.49 0.35 38.36 2.24
4884 6557 7.383572 CCTATTGAGCTTGTACTGCATAGTTAG 59.616 40.741 12.49 7.39 38.36 2.34
4885 6558 4.433615 TGAGCTTGTACTGCATAGTTAGC 58.566 43.478 12.49 0.00 38.36 3.09
4886 6559 4.160439 TGAGCTTGTACTGCATAGTTAGCT 59.840 41.667 11.18 11.18 42.49 3.32
4887 6560 5.091261 AGCTTGTACTGCATAGTTAGCTT 57.909 39.130 12.49 0.00 39.67 3.74
4888 6561 5.491982 AGCTTGTACTGCATAGTTAGCTTT 58.508 37.500 12.49 0.00 39.67 3.51
4889 6562 5.352569 AGCTTGTACTGCATAGTTAGCTTTG 59.647 40.000 12.49 0.00 39.67 2.77
4890 6563 5.351465 GCTTGTACTGCATAGTTAGCTTTGA 59.649 40.000 0.00 0.00 38.36 2.69
4891 6564 6.456181 GCTTGTACTGCATAGTTAGCTTTGAG 60.456 42.308 0.00 0.00 38.36 3.02
4892 6565 4.870426 TGTACTGCATAGTTAGCTTTGAGC 59.130 41.667 0.00 0.00 38.81 4.26
4893 6566 3.942829 ACTGCATAGTTAGCTTTGAGCA 58.057 40.909 0.00 0.00 37.54 4.26
4894 6567 3.686726 ACTGCATAGTTAGCTTTGAGCAC 59.313 43.478 0.00 0.00 37.54 4.40
4895 6568 3.937706 CTGCATAGTTAGCTTTGAGCACT 59.062 43.478 0.00 0.94 45.56 4.40
4896 6569 5.084818 TGCATAGTTAGCTTTGAGCACTA 57.915 39.130 0.00 3.10 45.56 2.74
4897 6570 5.111989 TGCATAGTTAGCTTTGAGCACTAG 58.888 41.667 0.00 0.00 45.56 2.57
4898 6571 4.025313 GCATAGTTAGCTTTGAGCACTAGC 60.025 45.833 0.00 0.00 45.56 3.42
4899 6572 3.685139 AGTTAGCTTTGAGCACTAGCA 57.315 42.857 0.00 0.00 45.56 3.49
4900 6573 4.213564 AGTTAGCTTTGAGCACTAGCAT 57.786 40.909 0.00 1.19 45.56 3.79
4901 6574 5.344743 AGTTAGCTTTGAGCACTAGCATA 57.655 39.130 0.00 0.49 45.56 3.14
4902 6575 5.923204 AGTTAGCTTTGAGCACTAGCATAT 58.077 37.500 0.00 0.00 45.56 1.78
4903 6576 5.988561 AGTTAGCTTTGAGCACTAGCATATC 59.011 40.000 0.00 0.00 45.56 1.63
4904 6577 4.686191 AGCTTTGAGCACTAGCATATCT 57.314 40.909 10.31 0.00 45.56 1.98
4905 6578 4.630111 AGCTTTGAGCACTAGCATATCTC 58.370 43.478 10.31 0.00 45.56 2.75
4906 6579 4.344679 AGCTTTGAGCACTAGCATATCTCT 59.655 41.667 10.31 0.00 45.56 3.10
4907 6580 4.448395 GCTTTGAGCACTAGCATATCTCTG 59.552 45.833 0.00 0.00 45.49 3.35
4908 6581 3.657015 TGAGCACTAGCATATCTCTGC 57.343 47.619 0.00 0.00 45.49 4.26
4918 6591 4.797800 GCATATCTCTGCTCATGTAGGA 57.202 45.455 0.00 0.00 39.12 2.94
4919 6592 4.746729 GCATATCTCTGCTCATGTAGGAG 58.253 47.826 7.16 7.16 44.71 3.69
4920 6593 4.220382 GCATATCTCTGCTCATGTAGGAGT 59.780 45.833 11.42 0.00 43.80 3.85
4921 6594 5.712004 CATATCTCTGCTCATGTAGGAGTG 58.288 45.833 11.42 9.87 43.80 3.51
4922 6595 2.382882 TCTCTGCTCATGTAGGAGTGG 58.617 52.381 11.42 7.68 43.80 4.00
4930 6603 5.604231 TGCTCATGTAGGAGTGGATTTAGAT 59.396 40.000 0.00 0.00 37.24 1.98
4944 6617 7.072202 AGTGGATTTAGATCATCTCCAACAGAT 59.928 37.037 0.00 0.00 43.33 2.90
4992 6665 7.424227 AATCTTTTACAACGTCGAAATACCA 57.576 32.000 0.00 0.00 0.00 3.25
4998 6671 5.934935 ACAACGTCGAAATACCATTTTCT 57.065 34.783 0.00 0.00 34.19 2.52
5006 6679 1.087202 ATACCATTTTCTCGCGCGCA 61.087 50.000 32.61 17.14 0.00 6.09
5026 6702 3.732849 GGGAGGGAGGGGTTGCTG 61.733 72.222 0.00 0.00 0.00 4.41
5097 6773 0.228742 CGCTAAATTACATCGCGCGT 59.771 50.000 30.98 13.76 37.29 6.01
5258 6935 7.381948 TCATGAACAATGCAACAAATAGTCAAC 59.618 33.333 0.00 0.00 36.11 3.18
5259 6936 6.567959 TGAACAATGCAACAAATAGTCAACA 58.432 32.000 0.00 0.00 0.00 3.33
5260 6937 7.208777 TGAACAATGCAACAAATAGTCAACAT 58.791 30.769 0.00 0.00 0.00 2.71
5263 6940 7.380536 ACAATGCAACAAATAGTCAACATCAT 58.619 30.769 0.00 0.00 0.00 2.45
5301 6978 4.134563 ACATCAAACTAGTTTTGTCGCCT 58.865 39.130 18.25 0.00 44.47 5.52
5307 6984 3.870274 ACTAGTTTTGTCGCCTATTCCC 58.130 45.455 0.00 0.00 0.00 3.97
5312 6989 1.271856 TTGTCGCCTATTCCCTGACA 58.728 50.000 0.00 0.00 37.76 3.58
5332 7009 3.017442 CAACCACTCCTCGACTAGATCA 58.983 50.000 0.00 0.00 0.00 2.92
5336 7013 4.339814 ACCACTCCTCGACTAGATCATTTC 59.660 45.833 0.00 0.00 0.00 2.17
5345 7022 4.973051 CGACTAGATCATTTCGAAGGTCAG 59.027 45.833 0.00 0.00 33.20 3.51
5350 7027 1.739466 TCATTTCGAAGGTCAGCATGC 59.261 47.619 10.51 10.51 34.76 4.06
5369 7046 0.781787 CGTTTCAGCACGTCGAATGA 59.218 50.000 0.00 0.00 35.34 2.57
5382 7059 3.004839 CGTCGAATGACATGATAGGAGGT 59.995 47.826 0.00 0.00 45.80 3.85
5393 7070 5.307196 ACATGATAGGAGGTAATAAAGCGGT 59.693 40.000 0.00 0.00 0.00 5.68
5490 7169 4.451435 CCCAACTCATTCTCGATGATCATG 59.549 45.833 14.30 5.89 43.59 3.07
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 2.834505 CATGATTGTGGCCCCGGG 60.835 66.667 15.80 15.80 0.00 5.73
5 6 3.530260 GCATGATTGTGGCCCCGG 61.530 66.667 0.00 0.00 0.00 5.73
6 7 2.755064 TGCATGATTGTGGCCCCG 60.755 61.111 0.00 0.00 0.00 5.73
7 8 1.259840 AACTGCATGATTGTGGCCCC 61.260 55.000 0.00 0.00 0.00 5.80
8 9 0.609662 AAACTGCATGATTGTGGCCC 59.390 50.000 0.00 0.00 0.00 5.80
9 10 3.806625 ATAAACTGCATGATTGTGGCC 57.193 42.857 0.00 0.00 0.00 5.36
10 11 4.931002 ACAAATAAACTGCATGATTGTGGC 59.069 37.500 0.00 0.00 0.00 5.01
11 12 5.927689 ACACAAATAAACTGCATGATTGTGG 59.072 36.000 21.29 10.92 46.26 4.17
12 13 6.641723 TGACACAAATAAACTGCATGATTGTG 59.358 34.615 18.28 18.28 46.95 3.33
13 14 6.642131 GTGACACAAATAAACTGCATGATTGT 59.358 34.615 0.00 0.00 0.00 2.71
14 15 6.183359 CGTGACACAAATAAACTGCATGATTG 60.183 38.462 6.37 0.00 0.00 2.67
15 16 5.858049 CGTGACACAAATAAACTGCATGATT 59.142 36.000 6.37 0.00 0.00 2.57
16 17 5.393124 CGTGACACAAATAAACTGCATGAT 58.607 37.500 6.37 0.00 0.00 2.45
17 18 4.782156 CGTGACACAAATAAACTGCATGA 58.218 39.130 6.37 0.00 0.00 3.07
18 19 3.361644 GCGTGACACAAATAAACTGCATG 59.638 43.478 6.37 0.00 0.00 4.06
19 20 3.253188 AGCGTGACACAAATAAACTGCAT 59.747 39.130 6.37 0.00 0.00 3.96
20 21 2.616376 AGCGTGACACAAATAAACTGCA 59.384 40.909 6.37 0.00 0.00 4.41
21 22 3.226347 GAGCGTGACACAAATAAACTGC 58.774 45.455 6.37 0.00 0.00 4.40
22 23 4.211389 GTGAGCGTGACACAAATAAACTG 58.789 43.478 6.37 0.00 38.05 3.16
23 24 3.874543 TGTGAGCGTGACACAAATAAACT 59.125 39.130 6.37 0.00 43.73 2.66
24 25 4.203950 TGTGAGCGTGACACAAATAAAC 57.796 40.909 6.37 0.00 43.73 2.01
44 45 1.492873 CAACACGAGACACCGCATG 59.507 57.895 0.00 0.00 0.00 4.06
45 46 2.317609 GCAACACGAGACACCGCAT 61.318 57.895 0.00 0.00 0.00 4.73
46 47 2.964925 GCAACACGAGACACCGCA 60.965 61.111 0.00 0.00 0.00 5.69
47 48 3.712881 GGCAACACGAGACACCGC 61.713 66.667 0.00 0.00 0.00 5.68
48 49 2.022129 GAGGCAACACGAGACACCG 61.022 63.158 0.00 0.00 41.41 4.94
49 50 1.069090 TGAGGCAACACGAGACACC 59.931 57.895 0.00 0.00 41.41 4.16
50 51 2.226269 GTGAGGCAACACGAGACAC 58.774 57.895 0.00 0.00 41.41 3.67
51 52 4.750460 GTGAGGCAACACGAGACA 57.250 55.556 0.00 0.00 41.41 3.41
72 73 1.883084 GGGTCTAGCAACGCCATCG 60.883 63.158 0.00 0.00 42.43 3.84
73 74 1.883084 CGGGTCTAGCAACGCCATC 60.883 63.158 0.00 0.00 0.00 3.51
74 75 2.186903 CGGGTCTAGCAACGCCAT 59.813 61.111 0.00 0.00 0.00 4.40
75 76 4.752879 GCGGGTCTAGCAACGCCA 62.753 66.667 11.90 0.00 45.70 5.69
78 79 2.509336 CAGGCGGGTCTAGCAACG 60.509 66.667 0.00 0.00 36.08 4.10
79 80 1.448013 GACAGGCGGGTCTAGCAAC 60.448 63.158 5.29 0.00 34.92 4.17
80 81 2.978824 GACAGGCGGGTCTAGCAA 59.021 61.111 5.29 0.00 34.92 3.91
81 82 3.449227 CGACAGGCGGGTCTAGCA 61.449 66.667 9.96 0.00 35.63 3.49
117 118 1.461091 TATCACGATCGGACCAGCCC 61.461 60.000 20.98 0.00 0.00 5.19
118 119 0.039074 CTATCACGATCGGACCAGCC 60.039 60.000 20.98 0.00 0.00 4.85
119 120 0.039074 CCTATCACGATCGGACCAGC 60.039 60.000 20.98 0.00 0.00 4.85
120 121 1.605753 TCCTATCACGATCGGACCAG 58.394 55.000 20.98 13.15 28.91 4.00
121 122 2.061509 TTCCTATCACGATCGGACCA 57.938 50.000 20.98 0.00 33.07 4.02
122 123 2.740452 GTTTCCTATCACGATCGGACC 58.260 52.381 20.98 0.00 33.07 4.46
123 124 2.223433 ACGTTTCCTATCACGATCGGAC 60.223 50.000 20.98 2.99 39.76 4.79
124 125 2.019249 ACGTTTCCTATCACGATCGGA 58.981 47.619 20.98 13.98 39.76 4.55
125 126 2.117137 CACGTTTCCTATCACGATCGG 58.883 52.381 20.98 8.65 39.76 4.18
126 127 2.530297 CACACGTTTCCTATCACGATCG 59.470 50.000 14.88 14.88 39.76 3.69
127 128 3.303495 CACACACGTTTCCTATCACGATC 59.697 47.826 0.00 0.00 39.76 3.69
128 129 3.250744 CACACACGTTTCCTATCACGAT 58.749 45.455 0.00 0.00 39.76 3.73
129 130 2.668250 CACACACGTTTCCTATCACGA 58.332 47.619 0.00 0.00 39.76 4.35
130 131 1.126113 GCACACACGTTTCCTATCACG 59.874 52.381 0.00 0.00 42.29 4.35
131 132 2.157668 CAGCACACACGTTTCCTATCAC 59.842 50.000 0.00 0.00 0.00 3.06
132 133 2.412870 CAGCACACACGTTTCCTATCA 58.587 47.619 0.00 0.00 0.00 2.15
133 134 1.128692 GCAGCACACACGTTTCCTATC 59.871 52.381 0.00 0.00 0.00 2.08
134 135 1.156736 GCAGCACACACGTTTCCTAT 58.843 50.000 0.00 0.00 0.00 2.57
135 136 1.218875 CGCAGCACACACGTTTCCTA 61.219 55.000 0.00 0.00 0.00 2.94
136 137 2.534019 CGCAGCACACACGTTTCCT 61.534 57.895 0.00 0.00 0.00 3.36
137 138 2.052237 CGCAGCACACACGTTTCC 60.052 61.111 0.00 0.00 0.00 3.13
173 174 3.345808 CTGACAACGGCCCACACG 61.346 66.667 0.00 0.00 37.36 4.49
174 175 2.978010 CCTGACAACGGCCCACAC 60.978 66.667 0.00 0.00 0.00 3.82
175 176 4.947147 GCCTGACAACGGCCCACA 62.947 66.667 0.00 0.00 41.73 4.17
180 181 2.813908 CGTAGGCCTGACAACGGC 60.814 66.667 17.99 0.00 46.83 5.68
181 182 1.736645 CACGTAGGCCTGACAACGG 60.737 63.158 25.33 13.25 39.57 4.44
182 183 0.732880 CTCACGTAGGCCTGACAACG 60.733 60.000 21.38 21.38 40.99 4.10
183 184 1.014564 GCTCACGTAGGCCTGACAAC 61.015 60.000 17.99 4.03 0.00 3.32
184 185 1.292223 GCTCACGTAGGCCTGACAA 59.708 57.895 17.99 0.00 0.00 3.18
185 186 2.646175 GGCTCACGTAGGCCTGACA 61.646 63.158 17.99 0.00 44.97 3.58
186 187 2.184579 GGCTCACGTAGGCCTGAC 59.815 66.667 17.99 8.89 44.97 3.51
192 193 3.834799 GGTCCCGGCTCACGTAGG 61.835 72.222 0.00 0.00 42.24 3.18
193 194 3.834799 GGGTCCCGGCTCACGTAG 61.835 72.222 0.00 0.00 42.24 3.51
194 195 3.892104 AAGGGTCCCGGCTCACGTA 62.892 63.158 0.99 0.00 42.24 3.57
196 197 4.452733 GAAGGGTCCCGGCTCACG 62.453 72.222 0.99 0.00 43.80 4.35
197 198 3.003763 AGAAGGGTCCCGGCTCAC 61.004 66.667 0.99 0.00 0.00 3.51
198 199 3.003173 CAGAAGGGTCCCGGCTCA 61.003 66.667 0.99 0.00 0.00 4.26
199 200 3.003763 ACAGAAGGGTCCCGGCTC 61.004 66.667 0.99 0.74 0.00 4.70
200 201 3.003763 GACAGAAGGGTCCCGGCT 61.004 66.667 0.99 0.48 0.00 5.52
201 202 4.452733 CGACAGAAGGGTCCCGGC 62.453 72.222 0.99 0.00 34.24 6.13
202 203 3.771160 CCGACAGAAGGGTCCCGG 61.771 72.222 0.99 0.00 34.24 5.73
203 204 4.452733 GCCGACAGAAGGGTCCCG 62.453 72.222 0.99 0.00 34.24 5.14
204 205 4.452733 CGCCGACAGAAGGGTCCC 62.453 72.222 0.00 0.00 34.24 4.46
205 206 3.644399 GACGCCGACAGAAGGGTCC 62.644 68.421 0.00 0.00 34.24 4.46
206 207 2.126031 GACGCCGACAGAAGGGTC 60.126 66.667 0.00 0.00 34.42 4.46
207 208 3.692406 GGACGCCGACAGAAGGGT 61.692 66.667 0.00 0.00 0.00 4.34
208 209 3.358076 GAGGACGCCGACAGAAGGG 62.358 68.421 0.00 0.00 0.00 3.95
209 210 2.182030 GAGGACGCCGACAGAAGG 59.818 66.667 0.00 0.00 0.00 3.46
210 211 2.202492 CGAGGACGCCGACAGAAG 60.202 66.667 0.00 0.00 0.00 2.85
232 233 2.740055 CAGGTCAGAGTGGCACGC 60.740 66.667 13.85 13.85 40.45 5.34
233 234 2.047844 CCAGGTCAGAGTGGCACG 60.048 66.667 12.71 0.00 0.00 5.34
237 238 2.667418 CCAGCCAGGTCAGAGTGG 59.333 66.667 0.00 0.00 36.85 4.00
238 239 1.772819 AACCCAGCCAGGTCAGAGTG 61.773 60.000 0.00 0.00 40.05 3.51
239 240 1.462238 AACCCAGCCAGGTCAGAGT 60.462 57.895 0.00 0.00 40.05 3.24
240 241 1.002868 CAACCCAGCCAGGTCAGAG 60.003 63.158 0.00 0.00 40.05 3.35
241 242 3.160585 CAACCCAGCCAGGTCAGA 58.839 61.111 0.00 0.00 40.05 3.27
242 243 2.674380 GCAACCCAGCCAGGTCAG 60.674 66.667 0.00 0.00 40.05 3.51
243 244 3.067084 TTGCAACCCAGCCAGGTCA 62.067 57.895 0.00 0.00 40.05 4.02
244 245 2.203480 TTGCAACCCAGCCAGGTC 60.203 61.111 0.00 0.00 40.05 3.85
245 246 2.521708 GTTGCAACCCAGCCAGGT 60.522 61.111 19.15 0.00 44.00 4.00
246 247 2.521465 TGTTGCAACCCAGCCAGG 60.521 61.111 26.14 0.00 37.03 4.45
247 248 2.567497 CCTGTTGCAACCCAGCCAG 61.567 63.158 26.14 15.21 0.00 4.85
248 249 2.000825 TACCTGTTGCAACCCAGCCA 62.001 55.000 26.14 6.07 0.00 4.75
249 250 1.228429 TACCTGTTGCAACCCAGCC 60.228 57.895 26.14 1.01 0.00 4.85
250 251 1.244019 CCTACCTGTTGCAACCCAGC 61.244 60.000 26.14 1.80 0.00 4.85
251 252 1.244019 GCCTACCTGTTGCAACCCAG 61.244 60.000 26.14 17.32 0.00 4.45
252 253 1.228429 GCCTACCTGTTGCAACCCA 60.228 57.895 26.14 8.35 0.00 4.51
253 254 2.332654 CGCCTACCTGTTGCAACCC 61.333 63.158 26.14 3.40 0.00 4.11
254 255 2.978018 GCGCCTACCTGTTGCAACC 61.978 63.158 26.14 9.39 0.00 3.77
255 256 2.561373 GCGCCTACCTGTTGCAAC 59.439 61.111 22.83 22.83 0.00 4.17
256 257 2.671619 GGCGCCTACCTGTTGCAA 60.672 61.111 22.15 0.00 0.00 4.08
257 258 4.715523 GGGCGCCTACCTGTTGCA 62.716 66.667 28.56 0.00 0.00 4.08
276 277 4.129737 ACGCGTCATGGACCCTCG 62.130 66.667 5.58 0.00 0.00 4.63
324 325 2.898343 GTGACGCAAACCCACCGT 60.898 61.111 0.00 0.00 37.99 4.83
325 326 4.007940 CGTGACGCAAACCCACCG 62.008 66.667 0.00 0.00 0.00 4.94
342 343 2.806856 CGAGAAGACGCATGCTGGC 61.807 63.158 17.13 11.70 0.00 4.85
354 355 1.664649 TGGCACAACGAGCGAGAAG 60.665 57.895 0.00 0.00 31.92 2.85
368 369 2.352422 GCCCTCTCACACATGGCA 59.648 61.111 0.00 0.00 41.76 4.92
372 373 1.893786 GTCTCGCCCTCTCACACAT 59.106 57.895 0.00 0.00 0.00 3.21
373 374 2.626780 CGTCTCGCCCTCTCACACA 61.627 63.158 0.00 0.00 0.00 3.72
374 375 2.179517 CGTCTCGCCCTCTCACAC 59.820 66.667 0.00 0.00 0.00 3.82
452 453 3.679083 GCTCCACGAACAATAGCCTAACT 60.679 47.826 0.00 0.00 0.00 2.24
459 460 1.725641 TGCAGCTCCACGAACAATAG 58.274 50.000 0.00 0.00 0.00 1.73
491 492 3.220110 TCACCTACGACAAAGTCTCTGT 58.780 45.455 0.00 0.00 0.00 3.41
528 529 4.392754 TCATCGACAATCATGTTGTGGAAG 59.607 41.667 20.59 17.88 40.74 3.46
549 551 1.066430 GTTGCCCCTTCACTATCGTCA 60.066 52.381 0.00 0.00 0.00 4.35
556 558 0.398318 GTCTGAGTTGCCCCTTCACT 59.602 55.000 0.00 0.00 0.00 3.41
562 564 0.036732 TCATGTGTCTGAGTTGCCCC 59.963 55.000 0.00 0.00 0.00 5.80
591 593 9.042450 TCTCATACTAAAACCCTTTGTCTCATA 57.958 33.333 0.00 0.00 0.00 2.15
592 594 7.918076 TCTCATACTAAAACCCTTTGTCTCAT 58.082 34.615 0.00 0.00 0.00 2.90
593 595 7.311092 TCTCATACTAAAACCCTTTGTCTCA 57.689 36.000 0.00 0.00 0.00 3.27
594 596 7.878644 ACTTCTCATACTAAAACCCTTTGTCTC 59.121 37.037 0.00 0.00 0.00 3.36
595 597 7.661847 CACTTCTCATACTAAAACCCTTTGTCT 59.338 37.037 0.00 0.00 0.00 3.41
596 598 7.444487 ACACTTCTCATACTAAAACCCTTTGTC 59.556 37.037 0.00 0.00 0.00 3.18
598 600 7.444183 TCACACTTCTCATACTAAAACCCTTTG 59.556 37.037 0.00 0.00 0.00 2.77
601 603 6.270231 AGTCACACTTCTCATACTAAAACCCT 59.730 38.462 0.00 0.00 0.00 4.34
602 604 6.369065 CAGTCACACTTCTCATACTAAAACCC 59.631 42.308 0.00 0.00 0.00 4.11
610 891 7.915923 TCGATTAATCAGTCACACTTCTCATAC 59.084 37.037 15.57 0.00 0.00 2.39
624 905 6.180472 ACCCTGAAATGTTCGATTAATCAGT 58.820 36.000 15.57 0.00 32.86 3.41
628 909 7.116736 AGGTAACCCTGAAATGTTCGATTAAT 58.883 34.615 0.00 0.00 40.58 1.40
629 910 6.478129 AGGTAACCCTGAAATGTTCGATTAA 58.522 36.000 0.00 0.00 40.58 1.40
647 928 2.235536 ATTTGACGCGCGCAGGTAAC 62.236 55.000 32.58 14.63 0.00 2.50
648 929 0.736672 TATTTGACGCGCGCAGGTAA 60.737 50.000 32.58 18.98 0.00 2.85
650 931 1.366111 AATATTTGACGCGCGCAGGT 61.366 50.000 32.58 22.08 0.00 4.00
652 933 2.289654 CTAAATATTTGACGCGCGCAG 58.710 47.619 32.58 24.87 0.00 5.18
653 934 1.004398 CCTAAATATTTGACGCGCGCA 60.004 47.619 32.58 25.38 0.00 6.09
655 936 1.070175 CCCCTAAATATTTGACGCGCG 60.070 52.381 30.96 30.96 0.00 6.86
656 937 1.944709 ACCCCTAAATATTTGACGCGC 59.055 47.619 5.73 0.00 0.00 6.86
657 938 2.220133 CGACCCCTAAATATTTGACGCG 59.780 50.000 11.05 3.53 0.00 6.01
658 939 2.546789 CCGACCCCTAAATATTTGACGC 59.453 50.000 11.05 0.00 0.00 5.19
659 940 4.062677 TCCGACCCCTAAATATTTGACG 57.937 45.455 11.05 6.13 0.00 4.35
660 941 6.320418 ACAAATCCGACCCCTAAATATTTGAC 59.680 38.462 11.05 0.00 36.70 3.18
661 942 6.428295 ACAAATCCGACCCCTAAATATTTGA 58.572 36.000 11.05 0.00 36.70 2.69
667 950 4.310022 TTGACAAATCCGACCCCTAAAT 57.690 40.909 0.00 0.00 0.00 1.40
696 979 1.135859 GTGTTTTCAGAGCATCGGCAG 60.136 52.381 0.00 0.00 44.61 4.85
717 1045 6.418946 GTGGAGAAATTTACTCTGGATTCCT 58.581 40.000 3.95 0.00 35.10 3.36
718 1046 5.590663 GGTGGAGAAATTTACTCTGGATTCC 59.409 44.000 13.68 0.00 35.10 3.01
722 1052 4.844085 TGAGGTGGAGAAATTTACTCTGGA 59.156 41.667 13.68 1.77 35.10 3.86
747 1077 3.669036 CTCTCGTGACTCGTGGCCG 62.669 68.421 0.00 0.00 40.80 6.13
750 1080 2.878429 CCCTCTCGTGACTCGTGG 59.122 66.667 0.00 0.00 40.80 4.94
756 2363 2.103042 GCATGTGCCCTCTCGTGAC 61.103 63.158 0.00 0.00 34.31 3.67
831 2438 1.153881 GAGTTGACGAGGGTACGGC 60.154 63.158 0.00 0.00 42.12 5.68
940 2547 7.834181 ACATATTGTATTGAGTAGCTTGGGTTT 59.166 33.333 0.00 0.00 0.00 3.27
1128 2739 3.902086 GACGGCGCTACCTCCTCC 61.902 72.222 6.90 0.00 35.61 4.30
1169 2780 4.104738 AGAAATTTCTCCAGTCCTGTCCAA 59.895 41.667 15.11 0.00 29.94 3.53
1303 2936 1.098712 AAAGACGAAGCCACGGCAAA 61.099 50.000 11.35 0.00 44.44 3.68
1515 3148 2.032528 TGCTTCCAGTCGCCCTTG 59.967 61.111 0.00 0.00 0.00 3.61
1605 3238 4.309950 GGCAACGGGTCAGACGGT 62.310 66.667 0.00 0.00 35.23 4.83
1698 3331 3.066190 CGGGAGACGGCTACACCA 61.066 66.667 0.98 0.00 39.03 4.17
1938 3571 1.052617 TCTTGTCGTGGGTGATTGGA 58.947 50.000 0.00 0.00 0.00 3.53
1998 3631 2.277437 CGTATGGTGCGCGTCGTA 60.277 61.111 8.43 0.00 0.00 3.43
2008 3641 4.570663 GAGCTCGCCGCGTATGGT 62.571 66.667 13.39 9.81 45.59 3.55
2010 3643 3.323136 GTGAGCTCGCCGCGTATG 61.323 66.667 16.69 5.80 45.59 2.39
2011 3644 4.907034 CGTGAGCTCGCCGCGTAT 62.907 66.667 21.21 0.00 45.59 3.06
2042 3675 2.885774 GAAGTAGCCGGCGTCTGACC 62.886 65.000 23.20 11.99 0.00 4.02
2046 3679 3.823330 CCGAAGTAGCCGGCGTCT 61.823 66.667 23.20 20.17 40.54 4.18
2315 3948 2.640989 CGTCCACCGACTTGTCGA 59.359 61.111 22.54 1.73 39.56 4.20
2724 4357 0.249868 CGAACCTGTTCCACAGCTCA 60.250 55.000 4.54 0.00 44.63 4.26
2877 4510 2.676471 GCAAGGTCACCCGCCAAT 60.676 61.111 0.00 0.00 35.12 3.16
3070 4703 2.945890 GCATTTCCGAGGAGGGTGATTT 60.946 50.000 0.00 0.00 41.52 2.17
3075 4708 0.909610 TCTGCATTTCCGAGGAGGGT 60.910 55.000 0.00 0.00 41.52 4.34
3114 4762 3.263503 CTCCGCGGACACGTTGAGA 62.264 63.158 27.28 0.00 43.45 3.27
3157 4805 0.391597 AACAGGACCGACACGTTCAT 59.608 50.000 0.00 0.00 0.00 2.57
3170 4818 0.401738 CAAGCCTTCCAGGAACAGGA 59.598 55.000 11.10 0.00 44.25 3.86
3187 4835 1.069427 CGTCCACCGGGTTGTACAA 59.931 57.895 6.32 3.59 34.93 2.41
3297 4945 3.498121 GGTAGTCCACCCTCATCTCGATA 60.498 52.174 0.00 0.00 42.07 2.92
3342 4990 1.674322 CTTCGCGGTGGGGTTGATT 60.674 57.895 6.13 0.00 0.00 2.57
3396 5044 2.235016 CGTCGCGTCAAACCACAGT 61.235 57.895 5.77 0.00 0.00 3.55
3564 5212 1.080366 GGACACGTACGGCATCACA 60.080 57.895 21.06 0.00 0.00 3.58
3789 5437 2.031012 CACACCTTCTGCGCCAGA 59.969 61.111 4.18 5.06 38.87 3.86
3879 5527 1.517257 CACGCCGAAGCTGTAGAGG 60.517 63.158 0.00 0.00 36.60 3.69
4071 5719 3.185299 TACGTTGCCCACCACCTGG 62.185 63.158 0.00 0.00 40.26 4.45
4080 5728 3.419759 CGCCACAGTACGTTGCCC 61.420 66.667 0.00 0.00 32.63 5.36
4089 5737 2.267006 CAGCTGATCCGCCACAGT 59.733 61.111 8.42 0.00 36.62 3.55
4108 5756 0.972983 TAGCTCTTCTTCAGCGGCCT 60.973 55.000 0.00 0.00 42.14 5.19
4305 5953 4.121227 CGCTGCTGCACGTACACG 62.121 66.667 16.29 0.00 46.33 4.49
4308 5956 3.777925 CACCGCTGCTGCACGTAC 61.778 66.667 16.29 0.00 39.64 3.67
4323 5971 4.507710 TGCTGATGATCTTGTAGTTCCAC 58.492 43.478 0.00 0.00 0.00 4.02
4446 6094 4.814294 GCCTCGTTCACGCCGGAT 62.814 66.667 5.05 0.00 39.60 4.18
4513 6162 2.569059 CCTACAGAGAACCGTCCGATA 58.431 52.381 0.00 0.00 0.00 2.92
4534 6183 7.367741 ACATACATTGTCAACCTACGGGAGG 62.368 48.000 4.21 4.21 42.89 4.30
4535 6184 2.762535 ACATTGTCAACCTACGGGAG 57.237 50.000 0.00 0.00 36.25 4.30
4536 6185 3.516300 ACATACATTGTCAACCTACGGGA 59.484 43.478 0.00 0.00 30.89 5.14
4537 6186 3.621268 CACATACATTGTCAACCTACGGG 59.379 47.826 0.00 0.00 36.00 5.28
4538 6187 3.063452 GCACATACATTGTCAACCTACGG 59.937 47.826 0.00 0.00 36.00 4.02
4539 6188 3.932710 AGCACATACATTGTCAACCTACG 59.067 43.478 0.00 0.00 36.00 3.51
4634 6302 9.197694 CTGATATTAGTAGCACAAATGGAGTAC 57.802 37.037 0.00 0.00 0.00 2.73
4646 6314 8.355913 CAGAGAATGTGACTGATATTAGTAGCA 58.644 37.037 0.00 3.49 34.07 3.49
4653 6321 8.648693 TGATGATCAGAGAATGTGACTGATATT 58.351 33.333 0.09 0.00 43.07 1.28
4654 6322 8.191534 TGATGATCAGAGAATGTGACTGATAT 57.808 34.615 0.09 0.00 43.07 1.63
4655 6323 7.592885 TGATGATCAGAGAATGTGACTGATA 57.407 36.000 0.09 0.00 43.07 2.15
4657 6325 5.927281 TGATGATCAGAGAATGTGACTGA 57.073 39.130 0.09 0.00 43.07 3.41
4674 6347 8.777413 CAATTCTAGAGTTTTTGTCACTGATGA 58.223 33.333 0.00 0.00 0.00 2.92
4680 6353 6.438763 CCACCAATTCTAGAGTTTTTGTCAC 58.561 40.000 0.00 0.00 0.00 3.67
4687 6360 3.330701 TGGAGCCACCAATTCTAGAGTTT 59.669 43.478 0.00 0.00 46.75 2.66
4701 6374 2.432628 CGACGGTTCTGGAGCCAC 60.433 66.667 4.50 0.00 0.00 5.01
4714 6387 2.225019 AGTAGTACTCAACACCACGACG 59.775 50.000 0.00 0.00 0.00 5.12
4718 6391 5.702349 ACACTAGTAGTACTCAACACCAC 57.298 43.478 5.96 0.00 0.00 4.16
4732 6405 8.982091 AGAGCATTTAGATCACTACACTAGTA 57.018 34.615 0.00 0.00 37.23 1.82
4733 6406 7.889873 AGAGCATTTAGATCACTACACTAGT 57.110 36.000 0.00 0.00 40.28 2.57
4780 6453 9.296400 GCATCATTTACGGTGTACAAATAAATT 57.704 29.630 13.60 3.50 0.00 1.82
4781 6454 7.918562 GGCATCATTTACGGTGTACAAATAAAT 59.081 33.333 0.00 5.86 0.00 1.40
4782 6455 7.251994 GGCATCATTTACGGTGTACAAATAAA 58.748 34.615 0.00 3.64 0.00 1.40
4783 6456 6.457122 CGGCATCATTTACGGTGTACAAATAA 60.457 38.462 0.00 0.00 0.00 1.40
4784 6457 5.006844 CGGCATCATTTACGGTGTACAAATA 59.993 40.000 0.00 0.00 0.00 1.40
4785 6458 4.201871 CGGCATCATTTACGGTGTACAAAT 60.202 41.667 0.00 0.00 0.00 2.32
4786 6459 3.125487 CGGCATCATTTACGGTGTACAAA 59.875 43.478 0.00 0.00 0.00 2.83
4787 6460 2.673862 CGGCATCATTTACGGTGTACAA 59.326 45.455 0.00 0.00 0.00 2.41
4788 6461 2.094130 TCGGCATCATTTACGGTGTACA 60.094 45.455 0.00 0.00 0.00 2.90
4789 6462 2.542597 TCGGCATCATTTACGGTGTAC 58.457 47.619 0.00 0.00 0.00 2.90
4790 6463 2.963548 TCGGCATCATTTACGGTGTA 57.036 45.000 0.00 0.00 0.00 2.90
4791 6464 2.325583 ATCGGCATCATTTACGGTGT 57.674 45.000 0.00 0.00 0.00 4.16
4792 6465 2.154963 CGTATCGGCATCATTTACGGTG 59.845 50.000 0.00 0.00 33.78 4.94
4793 6466 2.400399 CGTATCGGCATCATTTACGGT 58.600 47.619 0.00 0.00 33.78 4.83
4794 6467 1.126113 GCGTATCGGCATCATTTACGG 59.874 52.381 0.00 0.00 36.91 4.02
4795 6468 1.790043 TGCGTATCGGCATCATTTACG 59.210 47.619 0.00 0.00 38.17 3.18
4805 6478 1.601903 TCCAAAATCATGCGTATCGGC 59.398 47.619 0.00 0.00 0.00 5.54
4806 6479 4.488126 AATCCAAAATCATGCGTATCGG 57.512 40.909 0.00 0.00 0.00 4.18
4807 6480 4.146961 GCAAATCCAAAATCATGCGTATCG 59.853 41.667 0.00 0.00 0.00 2.92
4808 6481 5.042593 TGCAAATCCAAAATCATGCGTATC 58.957 37.500 0.00 0.00 36.62 2.24
4809 6482 5.008619 TGCAAATCCAAAATCATGCGTAT 57.991 34.783 0.00 0.00 36.62 3.06
4810 6483 4.446994 TGCAAATCCAAAATCATGCGTA 57.553 36.364 0.00 0.00 36.62 4.42
4811 6484 3.316071 TGCAAATCCAAAATCATGCGT 57.684 38.095 0.00 0.00 36.62 5.24
4812 6485 4.330347 TCATTGCAAATCCAAAATCATGCG 59.670 37.500 1.71 0.00 36.62 4.73
4813 6486 5.804692 TCATTGCAAATCCAAAATCATGC 57.195 34.783 1.71 0.00 0.00 4.06
4814 6487 7.786178 AGATCATTGCAAATCCAAAATCATG 57.214 32.000 1.71 0.00 0.00 3.07
4815 6488 7.201696 GCAAGATCATTGCAAATCCAAAATCAT 60.202 33.333 18.90 0.00 44.34 2.45
4816 6489 6.092944 GCAAGATCATTGCAAATCCAAAATCA 59.907 34.615 18.90 0.00 44.34 2.57
4817 6490 6.483687 GCAAGATCATTGCAAATCCAAAATC 58.516 36.000 18.90 0.00 44.34 2.17
4818 6491 6.431198 GCAAGATCATTGCAAATCCAAAAT 57.569 33.333 18.90 0.00 44.34 1.82
4819 6492 5.866335 GCAAGATCATTGCAAATCCAAAA 57.134 34.783 18.90 0.00 44.34 2.44
4829 6502 4.731961 CACGTGATTAAGCAAGATCATTGC 59.268 41.667 10.90 17.13 45.22 3.56
4830 6503 5.961843 GTCACGTGATTAAGCAAGATCATTG 59.038 40.000 23.12 1.22 35.01 2.82
4831 6504 5.643348 TGTCACGTGATTAAGCAAGATCATT 59.357 36.000 23.12 0.00 35.01 2.57
4832 6505 5.178061 TGTCACGTGATTAAGCAAGATCAT 58.822 37.500 23.12 0.00 35.01 2.45
4833 6506 4.565022 TGTCACGTGATTAAGCAAGATCA 58.435 39.130 23.12 7.26 0.00 2.92
4834 6507 5.316770 GTTGTCACGTGATTAAGCAAGATC 58.683 41.667 23.12 4.45 0.00 2.75
4835 6508 4.154195 GGTTGTCACGTGATTAAGCAAGAT 59.846 41.667 27.84 0.00 0.00 2.40
4836 6509 3.496884 GGTTGTCACGTGATTAAGCAAGA 59.503 43.478 27.84 7.71 0.00 3.02
4837 6510 3.364964 GGGTTGTCACGTGATTAAGCAAG 60.365 47.826 30.76 5.07 0.00 4.01
4838 6511 2.550606 GGGTTGTCACGTGATTAAGCAA 59.449 45.455 30.76 23.41 0.00 3.91
4839 6512 2.147958 GGGTTGTCACGTGATTAAGCA 58.852 47.619 30.76 20.09 0.00 3.91
4840 6513 2.423577 AGGGTTGTCACGTGATTAAGC 58.576 47.619 23.12 25.13 0.00 3.09
4841 6514 5.872617 TCAATAGGGTTGTCACGTGATTAAG 59.127 40.000 23.12 6.88 0.00 1.85
4842 6515 5.795972 TCAATAGGGTTGTCACGTGATTAA 58.204 37.500 23.12 16.84 0.00 1.40
4843 6516 5.408880 TCAATAGGGTTGTCACGTGATTA 57.591 39.130 23.12 11.46 0.00 1.75
4844 6517 4.253685 CTCAATAGGGTTGTCACGTGATT 58.746 43.478 23.12 6.22 0.00 2.57
4845 6518 3.861840 CTCAATAGGGTTGTCACGTGAT 58.138 45.455 23.12 6.95 0.00 3.06
4846 6519 2.611971 GCTCAATAGGGTTGTCACGTGA 60.612 50.000 15.76 15.76 0.00 4.35
4847 6520 1.732259 GCTCAATAGGGTTGTCACGTG 59.268 52.381 9.94 9.94 0.00 4.49
4848 6521 1.623811 AGCTCAATAGGGTTGTCACGT 59.376 47.619 0.00 0.00 0.00 4.49
4849 6522 2.386661 AGCTCAATAGGGTTGTCACG 57.613 50.000 0.00 0.00 0.00 4.35
4854 6527 3.375299 GCAGTACAAGCTCAATAGGGTTG 59.625 47.826 0.00 0.00 44.54 3.77
4855 6528 3.009033 TGCAGTACAAGCTCAATAGGGTT 59.991 43.478 10.98 0.00 0.00 4.11
4856 6529 2.571653 TGCAGTACAAGCTCAATAGGGT 59.428 45.455 10.98 0.00 0.00 4.34
4857 6530 3.266510 TGCAGTACAAGCTCAATAGGG 57.733 47.619 10.98 0.00 0.00 3.53
4858 6531 5.605534 ACTATGCAGTACAAGCTCAATAGG 58.394 41.667 10.98 0.85 31.45 2.57
4859 6532 7.095857 GCTAACTATGCAGTACAAGCTCAATAG 60.096 40.741 10.98 11.20 34.61 1.73
4860 6533 6.701841 GCTAACTATGCAGTACAAGCTCAATA 59.298 38.462 10.98 1.76 34.61 1.90
4861 6534 5.525378 GCTAACTATGCAGTACAAGCTCAAT 59.475 40.000 10.98 0.79 34.61 2.57
4862 6535 4.870426 GCTAACTATGCAGTACAAGCTCAA 59.130 41.667 10.98 0.00 34.61 3.02
4863 6536 4.160439 AGCTAACTATGCAGTACAAGCTCA 59.840 41.667 9.20 0.00 39.47 4.26
4864 6537 4.688021 AGCTAACTATGCAGTACAAGCTC 58.312 43.478 9.20 0.00 39.47 4.09
4865 6538 4.744795 AGCTAACTATGCAGTACAAGCT 57.255 40.909 9.20 9.20 39.14 3.74
4866 6539 5.351465 TCAAAGCTAACTATGCAGTACAAGC 59.649 40.000 0.00 0.00 36.29 4.01
4867 6540 6.456181 GCTCAAAGCTAACTATGCAGTACAAG 60.456 42.308 0.00 0.00 38.45 3.16
4868 6541 5.351465 GCTCAAAGCTAACTATGCAGTACAA 59.649 40.000 0.00 0.00 38.45 2.41
4869 6542 4.870426 GCTCAAAGCTAACTATGCAGTACA 59.130 41.667 0.00 0.00 38.45 2.90
4870 6543 4.870426 TGCTCAAAGCTAACTATGCAGTAC 59.130 41.667 0.00 0.00 42.97 2.73
4871 6544 4.870426 GTGCTCAAAGCTAACTATGCAGTA 59.130 41.667 0.00 0.00 42.97 2.74
4872 6545 3.686726 GTGCTCAAAGCTAACTATGCAGT 59.313 43.478 0.00 0.00 42.97 4.40
4873 6546 3.937706 AGTGCTCAAAGCTAACTATGCAG 59.062 43.478 0.00 0.00 42.97 4.41
4874 6547 3.942829 AGTGCTCAAAGCTAACTATGCA 58.057 40.909 0.00 0.00 42.97 3.96
4875 6548 4.025313 GCTAGTGCTCAAAGCTAACTATGC 60.025 45.833 0.11 3.83 42.97 3.14
4876 6549 5.111989 TGCTAGTGCTCAAAGCTAACTATG 58.888 41.667 12.47 0.00 42.97 2.23
4877 6550 5.344743 TGCTAGTGCTCAAAGCTAACTAT 57.655 39.130 12.47 0.00 42.97 2.12
4878 6551 4.801330 TGCTAGTGCTCAAAGCTAACTA 57.199 40.909 12.47 0.57 42.97 2.24
4879 6552 3.685139 TGCTAGTGCTCAAAGCTAACT 57.315 42.857 12.47 0.00 42.97 2.24
4880 6553 5.988561 AGATATGCTAGTGCTCAAAGCTAAC 59.011 40.000 12.47 0.00 42.97 2.34
4881 6554 6.041409 AGAGATATGCTAGTGCTCAAAGCTAA 59.959 38.462 12.47 3.75 42.97 3.09
4882 6555 5.538053 AGAGATATGCTAGTGCTCAAAGCTA 59.462 40.000 12.47 5.36 42.97 3.32
4883 6556 4.344679 AGAGATATGCTAGTGCTCAAAGCT 59.655 41.667 12.47 0.00 42.97 3.74
4884 6557 4.448395 CAGAGATATGCTAGTGCTCAAAGC 59.552 45.833 6.27 6.27 42.82 3.51
4885 6558 4.448395 GCAGAGATATGCTAGTGCTCAAAG 59.552 45.833 0.00 0.00 43.07 2.77
4886 6559 4.375272 GCAGAGATATGCTAGTGCTCAAA 58.625 43.478 0.00 0.00 43.07 2.69
4887 6560 3.987547 GCAGAGATATGCTAGTGCTCAA 58.012 45.455 0.00 0.00 43.07 3.02
4888 6561 3.657015 GCAGAGATATGCTAGTGCTCA 57.343 47.619 0.00 0.00 43.07 4.26
4897 6570 4.220382 ACTCCTACATGAGCAGAGATATGC 59.780 45.833 0.00 0.00 46.88 3.14
4898 6571 5.336610 CCACTCCTACATGAGCAGAGATATG 60.337 48.000 0.00 0.00 35.72 1.78
4899 6572 4.771577 CCACTCCTACATGAGCAGAGATAT 59.228 45.833 0.00 0.00 35.72 1.63
4900 6573 4.141158 TCCACTCCTACATGAGCAGAGATA 60.141 45.833 0.00 0.00 35.72 1.98
4901 6574 2.964464 CCACTCCTACATGAGCAGAGAT 59.036 50.000 0.00 0.00 35.72 2.75
4902 6575 2.024941 TCCACTCCTACATGAGCAGAGA 60.025 50.000 0.00 0.00 35.72 3.10
4903 6576 2.382882 TCCACTCCTACATGAGCAGAG 58.617 52.381 0.00 2.50 35.72 3.35
4904 6577 2.532250 TCCACTCCTACATGAGCAGA 57.468 50.000 0.00 0.00 35.72 4.26
4905 6578 3.834489 AATCCACTCCTACATGAGCAG 57.166 47.619 0.00 0.00 35.72 4.24
4906 6579 4.962362 TCTAAATCCACTCCTACATGAGCA 59.038 41.667 0.00 0.00 35.72 4.26
4907 6580 5.537300 TCTAAATCCACTCCTACATGAGC 57.463 43.478 0.00 0.00 35.72 4.26
4908 6581 7.295322 TGATCTAAATCCACTCCTACATGAG 57.705 40.000 0.00 0.00 38.37 2.90
4909 6582 7.732140 AGATGATCTAAATCCACTCCTACATGA 59.268 37.037 0.00 0.00 0.00 3.07
4910 6583 7.905265 AGATGATCTAAATCCACTCCTACATG 58.095 38.462 0.00 0.00 0.00 3.21
4911 6584 7.180051 GGAGATGATCTAAATCCACTCCTACAT 59.820 40.741 0.00 0.00 42.94 2.29
4912 6585 6.495181 GGAGATGATCTAAATCCACTCCTACA 59.505 42.308 0.00 0.00 42.94 2.74
4913 6586 6.495181 TGGAGATGATCTAAATCCACTCCTAC 59.505 42.308 19.10 0.00 44.54 3.18
4914 6587 6.624297 TGGAGATGATCTAAATCCACTCCTA 58.376 40.000 19.10 9.97 44.54 2.94
4915 6588 5.471424 TGGAGATGATCTAAATCCACTCCT 58.529 41.667 19.10 0.00 44.54 3.69
4916 6589 5.815233 TGGAGATGATCTAAATCCACTCC 57.185 43.478 15.05 15.05 44.52 3.85
4917 6590 6.586344 TGTTGGAGATGATCTAAATCCACTC 58.414 40.000 0.00 0.00 39.70 3.51
4918 6591 6.385176 TCTGTTGGAGATGATCTAAATCCACT 59.615 38.462 0.00 0.00 39.70 4.00
4919 6592 6.586344 TCTGTTGGAGATGATCTAAATCCAC 58.414 40.000 0.00 0.00 39.70 4.02
4920 6593 6.813293 TCTGTTGGAGATGATCTAAATCCA 57.187 37.500 0.00 0.00 38.26 3.41
4969 6642 7.605410 ATGGTATTTCGACGTTGTAAAAGAT 57.395 32.000 1.96 0.00 0.00 2.40
4990 6663 2.574212 GTGCGCGCGAGAAAATGG 60.574 61.111 37.18 0.23 0.00 3.16
4992 6665 4.147322 CCGTGCGCGCGAGAAAAT 62.147 61.111 41.67 0.00 36.67 1.82
5012 6688 2.301738 GCTACAGCAACCCCTCCCT 61.302 63.158 0.00 0.00 41.59 4.20
5026 6702 7.485277 CGCAATATATACTACCACTTCTGCTAC 59.515 40.741 0.00 0.00 0.00 3.58
5060 6736 2.816958 CGCATGCTGGACGCTTCT 60.817 61.111 17.13 0.00 40.11 2.85
5074 6750 0.042535 GCGATGTAATTTAGCGCGCA 60.043 50.000 35.10 16.82 42.21 6.09
5097 6773 6.007076 TGGGAAATGTTATTTGTGCTAGACA 58.993 36.000 0.00 0.00 0.00 3.41
5110 6786 8.877864 AGTTCTATGTTGAATGGGAAATGTTA 57.122 30.769 0.00 0.00 0.00 2.41
5258 6935 9.623350 TGATGTTGTATGTTTGTTGTAATGATG 57.377 29.630 0.00 0.00 0.00 3.07
5301 6978 2.838202 GAGGAGTGGTTGTCAGGGAATA 59.162 50.000 0.00 0.00 0.00 1.75
5307 6984 0.962489 AGTCGAGGAGTGGTTGTCAG 59.038 55.000 0.00 0.00 0.00 3.51
5312 6989 3.367646 TGATCTAGTCGAGGAGTGGTT 57.632 47.619 0.00 0.00 0.00 3.67
5332 7009 0.729116 CGCATGCTGACCTTCGAAAT 59.271 50.000 17.13 0.00 0.00 2.17
5336 7013 0.179215 GAAACGCATGCTGACCTTCG 60.179 55.000 17.13 0.00 0.00 3.79
5350 7027 3.976866 TGTCATTCGACGTGCTGAAACG 61.977 50.000 0.00 2.35 45.80 3.60
5369 7046 5.307196 ACCGCTTTATTACCTCCTATCATGT 59.693 40.000 0.00 0.00 0.00 3.21
5382 7059 1.137479 CGAGGGTGGACCGCTTTATTA 59.863 52.381 4.75 0.00 46.96 0.98
5393 7070 2.680352 GAGGACTGCGAGGGTGGA 60.680 66.667 0.00 0.00 0.00 4.02
5463 7140 1.808411 TCGAGAATGAGTTGGGCAAC 58.192 50.000 0.00 0.00 41.45 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.