Multiple sequence alignment - TraesCS3B01G140900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G140900 chr3B 100.000 4098 0 0 1 4098 127298055 127293958 0.000000e+00 7568
1 TraesCS3B01G140900 chr3D 94.413 1933 79 12 1542 3457 81370423 81368503 0.000000e+00 2944
2 TraesCS3B01G140900 chr3D 88.104 1572 104 44 1 1511 81372033 81370484 0.000000e+00 1790
3 TraesCS3B01G140900 chr3D 93.548 248 13 1 3456 3703 81368449 81368205 2.330000e-97 366
4 TraesCS3B01G140900 chr3A 93.821 1926 84 20 1544 3457 95533636 95531734 0.000000e+00 2865
5 TraesCS3B01G140900 chr3A 85.127 1459 103 50 1 1394 95535639 95534230 0.000000e+00 1387
6 TraesCS3B01G140900 chr3A 93.333 255 14 1 3457 3711 95531657 95531406 1.390000e-99 374


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G140900 chr3B 127293958 127298055 4097 True 7568 7568 100.000000 1 4098 1 chr3B.!!$R1 4097
1 TraesCS3B01G140900 chr3D 81368205 81372033 3828 True 1700 2944 92.021667 1 3703 3 chr3D.!!$R1 3702
2 TraesCS3B01G140900 chr3A 95531406 95535639 4233 True 1542 2865 90.760333 1 3711 3 chr3A.!!$R1 3710

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
472 503 1.001641 AGTTGCCTCACCTGATGCC 60.002 57.895 0.77 0.0 35.27 4.40 F
1219 1318 0.109226 CTTCTCCGTTGGACTCCGTC 60.109 60.000 0.00 0.0 0.00 4.79 F
1252 1351 0.597072 GGGATCTCGTGTCCGGTATC 59.403 60.000 0.00 0.0 36.58 2.24 F
2094 2646 1.279271 CTGTTACACCTTCCCCAGAGG 59.721 57.143 0.00 0.0 40.24 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2299 2853 0.183492 ACAAGACTTGCTTCCTGCCA 59.817 50.000 15.24 0.0 42.00 4.92 R
2649 3207 0.725686 CTGCTGCAAGAAGTCCATCG 59.274 55.000 3.02 0.0 33.69 3.84 R
2826 3384 3.025866 GTACCCGCTGTACTGAACG 57.974 57.895 3.61 0.0 45.32 3.95 R
3834 4474 0.032540 CCTTTTGCAGCCTGTTCACC 59.967 55.000 0.00 0.0 0.00 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.588464 TCGACTCCCATCTCCTATCC 57.412 55.000 0.00 0.00 0.00 2.59
76 84 8.769891 CCGGAAATATTGTTTTATTAAATGGCC 58.230 33.333 0.00 0.00 0.00 5.36
244 252 2.509964 GAGGGAGGGGAAGATTTTAGCA 59.490 50.000 0.00 0.00 0.00 3.49
257 265 7.042725 GGAAGATTTTAGCACAGTTTCAAAACC 60.043 37.037 2.08 0.00 39.71 3.27
385 395 6.169094 TGGTCATCTTAAAAGCTTCTCTCTG 58.831 40.000 0.00 0.00 0.00 3.35
391 401 9.296400 CATCTTAAAAGCTTCTCTCTGTAGTAC 57.704 37.037 0.00 0.00 0.00 2.73
399 424 6.544564 AGCTTCTCTCTGTAGTACCTTATGAC 59.455 42.308 0.00 0.00 0.00 3.06
472 503 1.001641 AGTTGCCTCACCTGATGCC 60.002 57.895 0.77 0.00 35.27 4.40
505 536 3.963129 TGTCAAGGGTTCAGAAACAAGT 58.037 40.909 0.00 0.00 37.10 3.16
509 540 4.640201 TCAAGGGTTCAGAAACAAGTCAAG 59.360 41.667 0.00 0.00 37.10 3.02
532 564 5.104374 GCAACATGTGTATTTCCATGGAAG 58.896 41.667 25.69 14.67 42.15 3.46
533 565 5.105797 GCAACATGTGTATTTCCATGGAAGA 60.106 40.000 25.69 17.31 42.15 2.87
548 580 7.761409 TCCATGGAAGATTTTGATTTTACTCG 58.239 34.615 13.46 0.00 0.00 4.18
563 595 6.642707 TTTTACTCGTGGATTTGTGGAATT 57.357 33.333 0.00 0.00 0.00 2.17
564 596 5.621197 TTACTCGTGGATTTGTGGAATTG 57.379 39.130 0.00 0.00 0.00 2.32
596 628 5.938322 TCTGAACTTCAAACTGTTGACAAC 58.062 37.500 11.54 11.54 43.52 3.32
612 644 6.090088 TGTTGACAACGAATCAAACTTTTTGG 59.910 34.615 13.46 0.00 37.80 3.28
614 646 6.159988 TGACAACGAATCAAACTTTTTGGTT 58.840 32.000 0.00 0.00 0.00 3.67
636 668 9.233649 TGGTTACTTGTTTCTTCTTCTGTTTTA 57.766 29.630 0.00 0.00 0.00 1.52
747 818 5.325239 GCCCTTGCTAGAAAATATGGGTAT 58.675 41.667 7.23 0.00 36.00 2.73
765 836 3.937079 GGTATTGGGTTACAACTCGGAAG 59.063 47.826 0.00 0.00 42.94 3.46
875 961 1.962822 CGAGAGCCAGTGCAGCAAA 60.963 57.895 0.00 0.00 41.13 3.68
952 1038 1.168714 GCTCGAGAAGGCAATTTGGT 58.831 50.000 18.75 0.00 0.00 3.67
981 1067 4.085204 AATCGGCGGCGGGTTGTA 62.085 61.111 31.73 11.47 0.00 2.41
1116 1212 2.355481 GTCGACTTCACCGCCGTT 60.355 61.111 8.70 0.00 0.00 4.44
1217 1316 1.215647 CCTTCTCCGTTGGACTCCG 59.784 63.158 0.00 0.00 0.00 4.63
1218 1317 1.533469 CCTTCTCCGTTGGACTCCGT 61.533 60.000 0.00 0.00 0.00 4.69
1219 1318 0.109226 CTTCTCCGTTGGACTCCGTC 60.109 60.000 0.00 0.00 0.00 4.79
1220 1319 1.859427 TTCTCCGTTGGACTCCGTCG 61.859 60.000 5.16 5.16 32.65 5.12
1221 1320 2.595463 TCCGTTGGACTCCGTCGT 60.595 61.111 9.72 0.00 32.65 4.34
1222 1321 2.430244 CCGTTGGACTCCGTCGTG 60.430 66.667 9.72 0.00 32.65 4.35
1223 1322 2.640989 CGTTGGACTCCGTCGTGA 59.359 61.111 0.00 0.00 32.65 4.35
1224 1323 1.442184 CGTTGGACTCCGTCGTGAG 60.442 63.158 8.60 8.60 38.37 3.51
1242 1341 2.045634 TCGTGACGGGGATCTCGT 60.046 61.111 4.70 12.85 44.03 4.18
1243 1342 2.102357 CGTGACGGGGATCTCGTG 59.898 66.667 16.65 0.98 41.22 4.35
1244 1343 2.697761 CGTGACGGGGATCTCGTGT 61.698 63.158 16.65 4.24 41.22 4.49
1245 1344 1.139095 GTGACGGGGATCTCGTGTC 59.861 63.158 16.65 12.98 41.22 3.67
1249 1348 2.758737 GGGGATCTCGTGTCCGGT 60.759 66.667 0.00 0.00 36.58 5.28
1250 1349 1.454479 GGGGATCTCGTGTCCGGTA 60.454 63.158 0.00 0.00 36.58 4.02
1251 1350 0.826672 GGGGATCTCGTGTCCGGTAT 60.827 60.000 0.00 0.00 36.58 2.73
1252 1351 0.597072 GGGATCTCGTGTCCGGTATC 59.403 60.000 0.00 0.00 36.58 2.24
1262 1361 1.349688 TGTCCGGTATCTTGCAGGTTT 59.650 47.619 0.00 0.00 0.00 3.27
1352 1451 1.554392 CGCTCGATCCTGAGTTCAAG 58.446 55.000 0.00 0.00 38.28 3.02
1408 1896 3.254892 CTCCCTCGTTGCTCTCTTTTAC 58.745 50.000 0.00 0.00 0.00 2.01
1410 1898 1.993370 CCTCGTTGCTCTCTTTTACCG 59.007 52.381 0.00 0.00 0.00 4.02
1433 1945 2.356278 GCCTGGGCACATCTTGGA 59.644 61.111 6.75 0.00 41.49 3.53
1440 1952 1.538047 GGCACATCTTGGAAAGCTGA 58.462 50.000 0.00 0.00 42.40 4.26
1454 1966 5.183713 TGGAAAGCTGATCTTGGTATTGTTG 59.816 40.000 0.00 0.00 34.67 3.33
1469 1981 4.914177 ATTGTTGGGGATGCTTGATTTT 57.086 36.364 0.00 0.00 0.00 1.82
1474 1986 4.741321 TGGGGATGCTTGATTTTGATTC 57.259 40.909 0.00 0.00 0.00 2.52
1478 1990 5.107133 GGGATGCTTGATTTTGATTCTGTG 58.893 41.667 0.00 0.00 0.00 3.66
1479 1991 5.107133 GGATGCTTGATTTTGATTCTGTGG 58.893 41.667 0.00 0.00 0.00 4.17
1482 1994 6.647334 TGCTTGATTTTGATTCTGTGGTAA 57.353 33.333 0.00 0.00 0.00 2.85
1495 2007 5.648178 TCTGTGGTAATCGTAGTGCTTTA 57.352 39.130 0.00 0.00 0.00 1.85
1502 2014 6.036735 TGGTAATCGTAGTGCTTTAATTCAGC 59.963 38.462 3.09 3.09 37.82 4.26
1513 2025 6.336566 TGCTTTAATTCAGCAACAACTTTGA 58.663 32.000 9.32 0.00 44.42 2.69
1514 2026 6.255453 TGCTTTAATTCAGCAACAACTTTGAC 59.745 34.615 9.32 0.00 44.42 3.18
1515 2027 6.255453 GCTTTAATTCAGCAACAACTTTGACA 59.745 34.615 4.94 0.00 37.22 3.58
1516 2028 7.201513 GCTTTAATTCAGCAACAACTTTGACAA 60.202 33.333 4.94 0.00 37.22 3.18
1517 2029 7.754069 TTAATTCAGCAACAACTTTGACAAG 57.246 32.000 0.00 0.00 35.92 3.16
1518 2030 4.782019 TTCAGCAACAACTTTGACAAGT 57.218 36.364 0.00 0.00 45.89 3.16
1530 2042 6.854496 ACTTTGACAAGTTATGACGCTTTA 57.146 33.333 0.00 0.00 40.66 1.85
1531 2043 6.656003 ACTTTGACAAGTTATGACGCTTTAC 58.344 36.000 0.00 0.00 40.66 2.01
1532 2044 6.259167 ACTTTGACAAGTTATGACGCTTTACA 59.741 34.615 0.00 0.00 40.66 2.41
1534 2046 6.403333 TGACAAGTTATGACGCTTTACATC 57.597 37.500 0.00 0.00 0.00 3.06
1535 2047 5.929415 TGACAAGTTATGACGCTTTACATCA 59.071 36.000 0.00 0.00 0.00 3.07
1536 2048 6.425417 TGACAAGTTATGACGCTTTACATCAA 59.575 34.615 0.00 0.00 0.00 2.57
1537 2049 6.599437 ACAAGTTATGACGCTTTACATCAAC 58.401 36.000 0.00 0.00 0.00 3.18
1538 2050 6.203915 ACAAGTTATGACGCTTTACATCAACA 59.796 34.615 0.00 0.00 0.00 3.33
1540 2052 6.163476 AGTTATGACGCTTTACATCAACAGA 58.837 36.000 0.00 0.00 0.00 3.41
1547 2089 5.527582 ACGCTTTACATCAACAGAAGAAACT 59.472 36.000 0.00 0.00 0.00 2.66
1559 2101 8.522830 TCAACAGAAGAAACTTCAAATGAGTTT 58.477 29.630 12.86 2.20 38.31 2.66
1579 2121 3.071874 TGGTTCCAATTGTAGAGCAGG 57.928 47.619 4.43 0.00 0.00 4.85
1582 2124 3.559171 GGTTCCAATTGTAGAGCAGGACA 60.559 47.826 4.43 0.00 0.00 4.02
1587 2129 4.885907 CCAATTGTAGAGCAGGACAATGAT 59.114 41.667 4.43 0.00 43.73 2.45
1595 2139 8.874156 TGTAGAGCAGGACAATGATATAATCTT 58.126 33.333 0.00 0.00 0.00 2.40
1652 2196 9.193602 CGTTTGTAATTCAAATGTTCAACAAAC 57.806 29.630 14.52 14.52 45.88 2.93
1679 2223 5.420725 TGTGTGCCTGAGTAGTATTGATT 57.579 39.130 0.00 0.00 0.00 2.57
1680 2224 5.804639 TGTGTGCCTGAGTAGTATTGATTT 58.195 37.500 0.00 0.00 0.00 2.17
1681 2225 5.874810 TGTGTGCCTGAGTAGTATTGATTTC 59.125 40.000 0.00 0.00 0.00 2.17
1682 2226 5.874810 GTGTGCCTGAGTAGTATTGATTTCA 59.125 40.000 0.00 0.00 0.00 2.69
1683 2227 6.540189 GTGTGCCTGAGTAGTATTGATTTCAT 59.460 38.462 0.00 0.00 0.00 2.57
1684 2228 7.066284 GTGTGCCTGAGTAGTATTGATTTCATT 59.934 37.037 0.00 0.00 0.00 2.57
1691 2235 8.668353 TGAGTAGTATTGATTTCATTTCAGTGC 58.332 33.333 0.00 0.00 0.00 4.40
1695 2239 5.633830 ATTGATTTCATTTCAGTGCGAGT 57.366 34.783 0.00 0.00 0.00 4.18
1698 2242 4.152938 TGATTTCATTTCAGTGCGAGTCTG 59.847 41.667 0.00 0.00 0.00 3.51
1704 2248 6.805713 TCATTTCAGTGCGAGTCTGATTATA 58.194 36.000 5.70 0.00 40.83 0.98
1705 2249 7.436933 TCATTTCAGTGCGAGTCTGATTATAT 58.563 34.615 5.70 0.00 40.83 0.86
1706 2250 7.383300 TCATTTCAGTGCGAGTCTGATTATATG 59.617 37.037 5.70 7.45 40.83 1.78
1715 2259 6.183360 GCGAGTCTGATTATATGGAAGAATGC 60.183 42.308 0.00 0.00 0.00 3.56
1808 2352 4.589374 AGCTAGTGTGGTTCTACTTCTGTT 59.411 41.667 0.00 0.00 0.00 3.16
1895 2439 8.554835 AAAGCAACTTTCTTCTATAGAGAACC 57.445 34.615 2.02 0.00 36.75 3.62
1897 2441 7.912719 AGCAACTTTCTTCTATAGAGAACCTT 58.087 34.615 2.02 1.63 36.75 3.50
2073 2625 7.916977 TCATGAATATTTGCTACTTGATGCAAC 59.083 33.333 0.00 0.00 46.91 4.17
2094 2646 1.279271 CTGTTACACCTTCCCCAGAGG 59.721 57.143 0.00 0.00 40.24 3.69
2174 2728 6.393990 ACATATCTAATGAGATGCGGAAGAC 58.606 40.000 2.42 0.00 43.52 3.01
2299 2853 1.628846 AGGTCCGCACCACTCTTATTT 59.371 47.619 0.00 0.00 46.68 1.40
2411 2965 4.285003 TGGATTCAAAAGAGTCGGGTCTTA 59.715 41.667 1.25 0.00 35.65 2.10
2419 2973 2.358267 AGAGTCGGGTCTTATAACTGCG 59.642 50.000 0.00 0.00 0.00 5.18
2826 3384 1.065551 GATTCATTACTGGGCGCAACC 59.934 52.381 10.83 1.84 37.93 3.77
3178 3736 4.209288 CGATTGGTAAATTAGAGCACGGAG 59.791 45.833 0.00 0.00 0.00 4.63
3186 3744 4.537135 ATTAGAGCACGGAGTCTTGAAA 57.463 40.909 0.00 0.00 41.61 2.69
3192 3750 1.264288 CACGGAGTCTTGAAAAGTGGC 59.736 52.381 0.00 0.00 46.34 5.01
3193 3751 0.875059 CGGAGTCTTGAAAAGTGGCC 59.125 55.000 0.00 0.00 46.34 5.36
3225 3783 8.717821 CATTTATTTACGATCGGTGATATTGGT 58.282 33.333 20.98 0.00 0.00 3.67
3269 3829 7.492352 GTGTTTCACACCAAGTATAGACTTT 57.508 36.000 0.00 0.00 41.92 2.66
3416 3979 7.958088 AGTTTATCTTCTGGAGCCTATAAGAC 58.042 38.462 0.00 0.00 0.00 3.01
3449 4012 7.526608 TCAATTAACCAGAACTCGCTTATTTG 58.473 34.615 0.00 0.00 0.00 2.32
3465 4105 8.978539 TCGCTTATTTGATTGCTAGTACATTAG 58.021 33.333 0.00 0.00 0.00 1.73
3526 4166 7.913789 ACCAAACTACTCATCTACCAAATGTA 58.086 34.615 0.00 0.00 0.00 2.29
3571 4211 1.995376 ACCTTTAAGTGGTTGCCCTG 58.005 50.000 0.00 0.00 33.34 4.45
3623 4263 9.180678 GTTTGTGTAATGTACAAAATCTCAAGG 57.819 33.333 0.00 0.00 46.10 3.61
3631 4271 7.936496 TGTACAAAATCTCAAGGATGCATTA 57.064 32.000 0.00 0.00 34.45 1.90
3646 4286 8.174733 AGGATGCATTACAAATAATCAGAAGG 57.825 34.615 0.00 0.00 0.00 3.46
3667 4307 8.850156 AGAAGGTTCCATTATACAAATACATGC 58.150 33.333 0.00 0.00 0.00 4.06
3692 4332 8.905702 GCTACAAACAATCACAAGACATTTAAG 58.094 33.333 0.00 0.00 0.00 1.85
3716 4356 8.154649 AGTAAACTCAAATCTTGATCGTTTGT 57.845 30.769 13.07 3.18 38.06 2.83
3717 4357 9.268268 AGTAAACTCAAATCTTGATCGTTTGTA 57.732 29.630 13.07 0.00 38.06 2.41
3718 4358 9.530129 GTAAACTCAAATCTTGATCGTTTGTAG 57.470 33.333 13.07 9.44 38.06 2.74
3719 4359 6.170675 ACTCAAATCTTGATCGTTTGTAGC 57.829 37.500 10.47 0.00 39.30 3.58
3720 4360 5.700832 ACTCAAATCTTGATCGTTTGTAGCA 59.299 36.000 10.47 0.00 39.30 3.49
3721 4361 6.204688 ACTCAAATCTTGATCGTTTGTAGCAA 59.795 34.615 10.47 0.00 39.30 3.91
3722 4362 6.602179 TCAAATCTTGATCGTTTGTAGCAAG 58.398 36.000 0.00 0.00 37.79 4.01
3723 4363 6.426633 TCAAATCTTGATCGTTTGTAGCAAGA 59.573 34.615 6.28 6.28 46.00 3.02
3724 4364 6.414408 AATCTTGATCGTTTGTAGCAAGAG 57.586 37.500 9.31 0.00 45.40 2.85
3725 4365 4.883083 TCTTGATCGTTTGTAGCAAGAGT 58.117 39.130 0.00 0.00 39.77 3.24
3726 4366 4.686091 TCTTGATCGTTTGTAGCAAGAGTG 59.314 41.667 0.00 0.00 39.77 3.51
3727 4367 3.325870 TGATCGTTTGTAGCAAGAGTGG 58.674 45.455 0.00 0.00 0.00 4.00
3728 4368 2.163818 TCGTTTGTAGCAAGAGTGGG 57.836 50.000 0.00 0.00 0.00 4.61
3729 4369 0.517316 CGTTTGTAGCAAGAGTGGGC 59.483 55.000 0.00 0.00 0.00 5.36
3730 4370 0.517316 GTTTGTAGCAAGAGTGGGCG 59.483 55.000 0.00 0.00 34.54 6.13
3731 4371 1.234615 TTTGTAGCAAGAGTGGGCGC 61.235 55.000 0.00 0.00 34.54 6.53
3732 4372 2.111999 TTGTAGCAAGAGTGGGCGCT 62.112 55.000 7.64 0.00 38.51 5.92
3733 4373 2.103042 GTAGCAAGAGTGGGCGCTG 61.103 63.158 7.64 0.00 35.93 5.18
3734 4374 3.958147 TAGCAAGAGTGGGCGCTGC 62.958 63.158 7.64 7.49 35.93 5.25
3736 4376 3.429141 CAAGAGTGGGCGCTGCTG 61.429 66.667 7.64 0.00 0.00 4.41
3737 4377 3.630013 AAGAGTGGGCGCTGCTGA 61.630 61.111 7.64 0.00 0.00 4.26
3738 4378 3.890936 AAGAGTGGGCGCTGCTGAC 62.891 63.158 7.64 0.00 0.00 3.51
3739 4379 4.385405 GAGTGGGCGCTGCTGACT 62.385 66.667 7.64 1.98 0.00 3.41
3740 4380 3.890936 GAGTGGGCGCTGCTGACTT 62.891 63.158 7.64 0.00 0.00 3.01
3741 4381 2.980233 GTGGGCGCTGCTGACTTT 60.980 61.111 7.64 0.00 0.00 2.66
3742 4382 2.979676 TGGGCGCTGCTGACTTTG 60.980 61.111 7.64 0.00 0.00 2.77
3743 4383 2.980233 GGGCGCTGCTGACTTTGT 60.980 61.111 7.64 0.00 0.00 2.83
3744 4384 1.671054 GGGCGCTGCTGACTTTGTA 60.671 57.895 7.64 0.00 0.00 2.41
3745 4385 1.026718 GGGCGCTGCTGACTTTGTAT 61.027 55.000 7.64 0.00 0.00 2.29
3746 4386 0.097674 GGCGCTGCTGACTTTGTATG 59.902 55.000 7.64 0.00 0.00 2.39
3747 4387 0.798776 GCGCTGCTGACTTTGTATGT 59.201 50.000 0.00 0.00 0.00 2.29
3748 4388 1.464687 GCGCTGCTGACTTTGTATGTG 60.465 52.381 0.00 0.00 0.00 3.21
3749 4389 2.068519 CGCTGCTGACTTTGTATGTGA 58.931 47.619 0.00 0.00 0.00 3.58
3750 4390 2.480037 CGCTGCTGACTTTGTATGTGAA 59.520 45.455 0.00 0.00 0.00 3.18
3751 4391 3.424039 CGCTGCTGACTTTGTATGTGAAG 60.424 47.826 0.00 0.00 0.00 3.02
3752 4392 3.748048 GCTGCTGACTTTGTATGTGAAGA 59.252 43.478 0.00 0.00 0.00 2.87
3753 4393 4.394300 GCTGCTGACTTTGTATGTGAAGAT 59.606 41.667 0.00 0.00 0.00 2.40
3754 4394 5.106396 GCTGCTGACTTTGTATGTGAAGATT 60.106 40.000 0.00 0.00 0.00 2.40
3755 4395 6.486253 TGCTGACTTTGTATGTGAAGATTC 57.514 37.500 0.00 0.00 0.00 2.52
3756 4396 5.997129 TGCTGACTTTGTATGTGAAGATTCA 59.003 36.000 0.00 0.00 34.20 2.57
3757 4397 6.148315 TGCTGACTTTGTATGTGAAGATTCAG 59.852 38.462 0.00 0.00 37.98 3.02
3758 4398 6.148480 GCTGACTTTGTATGTGAAGATTCAGT 59.852 38.462 0.00 0.00 37.98 3.41
3759 4399 7.308229 GCTGACTTTGTATGTGAAGATTCAGTT 60.308 37.037 0.00 0.00 37.98 3.16
3760 4400 9.208022 CTGACTTTGTATGTGAAGATTCAGTTA 57.792 33.333 0.00 0.00 37.98 2.24
3761 4401 9.725019 TGACTTTGTATGTGAAGATTCAGTTAT 57.275 29.630 0.00 0.00 37.98 1.89
3771 4411 9.863845 TGTGAAGATTCAGTTATACAAATACGA 57.136 29.630 0.00 0.00 37.98 3.43
3780 4420 9.459640 TCAGTTATACAAATACGAACTATCAGC 57.540 33.333 0.00 0.00 0.00 4.26
3781 4421 8.700644 CAGTTATACAAATACGAACTATCAGCC 58.299 37.037 0.00 0.00 0.00 4.85
3782 4422 7.871463 AGTTATACAAATACGAACTATCAGCCC 59.129 37.037 0.00 0.00 0.00 5.19
3783 4423 3.454375 ACAAATACGAACTATCAGCCCG 58.546 45.455 0.00 0.00 0.00 6.13
3784 4424 2.150397 AATACGAACTATCAGCCCGC 57.850 50.000 0.00 0.00 0.00 6.13
3785 4425 1.037493 ATACGAACTATCAGCCCGCA 58.963 50.000 0.00 0.00 0.00 5.69
3786 4426 0.384309 TACGAACTATCAGCCCGCAG 59.616 55.000 0.00 0.00 0.00 5.18
3787 4427 2.240500 CGAACTATCAGCCCGCAGC 61.241 63.158 0.00 0.00 44.25 5.25
3817 4457 2.811317 CGAAGGTCTCGTGGCAGC 60.811 66.667 0.00 0.00 42.89 5.25
3818 4458 2.343758 GAAGGTCTCGTGGCAGCA 59.656 61.111 0.00 0.00 0.00 4.41
3819 4459 1.739562 GAAGGTCTCGTGGCAGCAG 60.740 63.158 0.00 0.00 0.00 4.24
3820 4460 2.159819 GAAGGTCTCGTGGCAGCAGA 62.160 60.000 0.00 0.00 0.00 4.26
3821 4461 1.758440 AAGGTCTCGTGGCAGCAGAA 61.758 55.000 0.00 0.00 0.00 3.02
3822 4462 1.301716 GGTCTCGTGGCAGCAGAAA 60.302 57.895 0.00 0.00 0.00 2.52
3823 4463 1.569479 GGTCTCGTGGCAGCAGAAAC 61.569 60.000 0.00 0.00 0.00 2.78
3824 4464 0.880278 GTCTCGTGGCAGCAGAAACA 60.880 55.000 0.00 0.00 0.00 2.83
3825 4465 0.601046 TCTCGTGGCAGCAGAAACAG 60.601 55.000 0.00 0.00 0.00 3.16
3826 4466 2.180131 CTCGTGGCAGCAGAAACAGC 62.180 60.000 0.00 0.00 0.00 4.40
3827 4467 2.545596 CGTGGCAGCAGAAACAGCA 61.546 57.895 0.00 0.00 0.00 4.41
3828 4468 1.285023 GTGGCAGCAGAAACAGCAG 59.715 57.895 0.00 0.00 0.00 4.24
3829 4469 2.257676 GGCAGCAGAAACAGCAGC 59.742 61.111 0.00 0.00 42.85 5.25
3830 4470 2.558286 GGCAGCAGAAACAGCAGCA 61.558 57.895 5.01 0.00 45.00 4.41
3831 4471 1.371389 GCAGCAGAAACAGCAGCAC 60.371 57.895 0.00 0.00 43.05 4.40
3832 4472 2.027325 CAGCAGAAACAGCAGCACA 58.973 52.632 0.00 0.00 0.00 4.57
3833 4473 0.317603 CAGCAGAAACAGCAGCACAC 60.318 55.000 0.00 0.00 0.00 3.82
3834 4474 1.369689 GCAGAAACAGCAGCACACG 60.370 57.895 0.00 0.00 0.00 4.49
3835 4475 1.280746 CAGAAACAGCAGCACACGG 59.719 57.895 0.00 0.00 0.00 4.94
3836 4476 1.153168 AGAAACAGCAGCACACGGT 60.153 52.632 0.00 0.00 0.00 4.83
3837 4477 1.009675 GAAACAGCAGCACACGGTG 60.010 57.895 6.58 6.58 43.71 4.94
3838 4478 1.436195 GAAACAGCAGCACACGGTGA 61.436 55.000 16.29 0.00 43.56 4.02
3839 4479 1.029408 AAACAGCAGCACACGGTGAA 61.029 50.000 16.29 0.00 43.56 3.18
3840 4480 1.714899 AACAGCAGCACACGGTGAAC 61.715 55.000 16.29 6.10 43.56 3.18
3841 4481 2.179547 CAGCAGCACACGGTGAACA 61.180 57.895 16.29 0.00 43.56 3.18
3842 4482 1.889105 AGCAGCACACGGTGAACAG 60.889 57.895 16.29 4.32 43.56 3.16
3843 4483 2.896801 GCAGCACACGGTGAACAGG 61.897 63.158 16.29 4.20 43.56 4.00
3844 4484 2.591715 AGCACACGGTGAACAGGC 60.592 61.111 16.29 9.77 35.23 4.85
3845 4485 2.591715 GCACACGGTGAACAGGCT 60.592 61.111 16.29 0.00 35.23 4.58
3846 4486 2.896801 GCACACGGTGAACAGGCTG 61.897 63.158 16.29 14.16 35.23 4.85
3847 4487 2.591715 ACACGGTGAACAGGCTGC 60.592 61.111 15.89 0.00 0.00 5.25
3848 4488 2.591429 CACGGTGAACAGGCTGCA 60.591 61.111 15.89 2.02 0.00 4.41
3849 4489 2.186160 CACGGTGAACAGGCTGCAA 61.186 57.895 15.89 0.00 0.00 4.08
3850 4490 1.453015 ACGGTGAACAGGCTGCAAA 60.453 52.632 15.89 0.00 0.00 3.68
3851 4491 1.034838 ACGGTGAACAGGCTGCAAAA 61.035 50.000 15.89 0.00 0.00 2.44
3852 4492 0.318107 CGGTGAACAGGCTGCAAAAG 60.318 55.000 15.89 0.00 0.00 2.27
3853 4493 0.032540 GGTGAACAGGCTGCAAAAGG 59.967 55.000 15.89 0.00 0.00 3.11
3854 4494 1.032014 GTGAACAGGCTGCAAAAGGA 58.968 50.000 15.89 0.00 0.00 3.36
3855 4495 1.408702 GTGAACAGGCTGCAAAAGGAA 59.591 47.619 15.89 0.00 0.00 3.36
3856 4496 2.106566 TGAACAGGCTGCAAAAGGAAA 58.893 42.857 15.89 0.00 0.00 3.13
3857 4497 2.159114 TGAACAGGCTGCAAAAGGAAAC 60.159 45.455 15.89 0.00 0.00 2.78
3858 4498 0.752658 ACAGGCTGCAAAAGGAAACC 59.247 50.000 15.89 0.00 0.00 3.27
3859 4499 0.752054 CAGGCTGCAAAAGGAAACCA 59.248 50.000 0.00 0.00 0.00 3.67
3860 4500 1.043022 AGGCTGCAAAAGGAAACCAG 58.957 50.000 0.50 0.00 0.00 4.00
3861 4501 0.033920 GGCTGCAAAAGGAAACCAGG 59.966 55.000 0.50 0.00 0.00 4.45
3862 4502 0.601046 GCTGCAAAAGGAAACCAGGC 60.601 55.000 0.00 0.00 0.00 4.85
3863 4503 0.752054 CTGCAAAAGGAAACCAGGCA 59.248 50.000 0.00 0.00 0.00 4.75
3864 4504 1.345415 CTGCAAAAGGAAACCAGGCAT 59.655 47.619 0.00 0.00 0.00 4.40
3865 4505 1.344114 TGCAAAAGGAAACCAGGCATC 59.656 47.619 0.00 0.00 0.00 3.91
3866 4506 1.620323 GCAAAAGGAAACCAGGCATCT 59.380 47.619 0.00 0.00 0.00 2.90
3867 4507 2.353109 GCAAAAGGAAACCAGGCATCTC 60.353 50.000 0.00 0.00 0.00 2.75
3868 4508 3.160269 CAAAAGGAAACCAGGCATCTCT 58.840 45.455 0.00 0.00 0.00 3.10
3869 4509 2.503895 AAGGAAACCAGGCATCTCTG 57.496 50.000 0.00 0.00 34.70 3.35
3870 4510 1.366319 AGGAAACCAGGCATCTCTGT 58.634 50.000 0.00 0.00 33.14 3.41
3871 4511 1.280421 AGGAAACCAGGCATCTCTGTC 59.720 52.381 0.00 0.00 33.14 3.51
3872 4512 1.003580 GGAAACCAGGCATCTCTGTCA 59.996 52.381 0.00 0.00 33.14 3.58
3873 4513 2.553028 GGAAACCAGGCATCTCTGTCAA 60.553 50.000 0.00 0.00 33.14 3.18
3874 4514 2.957402 AACCAGGCATCTCTGTCAAA 57.043 45.000 0.00 0.00 33.14 2.69
3875 4515 2.957402 ACCAGGCATCTCTGTCAAAA 57.043 45.000 0.00 0.00 33.14 2.44
3876 4516 3.228188 ACCAGGCATCTCTGTCAAAAA 57.772 42.857 0.00 0.00 33.14 1.94
3923 4563 7.814264 AAGATAATAAAGCCCTTCTGACATG 57.186 36.000 0.00 0.00 0.00 3.21
3924 4564 7.141758 AGATAATAAAGCCCTTCTGACATGA 57.858 36.000 0.00 0.00 0.00 3.07
3925 4565 7.577303 AGATAATAAAGCCCTTCTGACATGAA 58.423 34.615 0.00 0.00 0.00 2.57
3926 4566 8.055181 AGATAATAAAGCCCTTCTGACATGAAA 58.945 33.333 0.00 0.00 0.00 2.69
3927 4567 6.521151 AATAAAGCCCTTCTGACATGAAAG 57.479 37.500 0.00 0.00 0.00 2.62
3928 4568 3.515602 AAGCCCTTCTGACATGAAAGT 57.484 42.857 0.00 0.00 0.00 2.66
3929 4569 3.515602 AGCCCTTCTGACATGAAAGTT 57.484 42.857 0.00 0.00 0.00 2.66
3930 4570 3.152341 AGCCCTTCTGACATGAAAGTTG 58.848 45.455 0.00 0.00 0.00 3.16
3931 4571 2.352127 GCCCTTCTGACATGAAAGTTGC 60.352 50.000 0.00 0.00 0.00 4.17
3932 4572 2.229784 CCCTTCTGACATGAAAGTTGCC 59.770 50.000 0.00 0.00 0.00 4.52
3933 4573 2.886523 CCTTCTGACATGAAAGTTGCCA 59.113 45.455 0.00 0.00 0.00 4.92
3934 4574 3.304928 CCTTCTGACATGAAAGTTGCCAC 60.305 47.826 0.00 0.00 0.00 5.01
3935 4575 3.213206 TCTGACATGAAAGTTGCCACT 57.787 42.857 0.00 0.00 33.11 4.00
3936 4576 4.350368 TCTGACATGAAAGTTGCCACTA 57.650 40.909 0.00 0.00 30.68 2.74
3937 4577 4.713553 TCTGACATGAAAGTTGCCACTAA 58.286 39.130 0.00 0.00 30.68 2.24
3938 4578 4.515191 TCTGACATGAAAGTTGCCACTAAC 59.485 41.667 0.00 0.00 30.68 2.34
3939 4579 4.460263 TGACATGAAAGTTGCCACTAACT 58.540 39.130 0.00 0.00 42.43 2.24
3940 4580 5.616270 TGACATGAAAGTTGCCACTAACTA 58.384 37.500 0.00 0.00 39.86 2.24
3941 4581 6.058833 TGACATGAAAGTTGCCACTAACTAA 58.941 36.000 0.00 0.00 39.86 2.24
3942 4582 6.714810 TGACATGAAAGTTGCCACTAACTAAT 59.285 34.615 0.00 0.00 39.86 1.73
3943 4583 7.094805 TGACATGAAAGTTGCCACTAACTAATC 60.095 37.037 0.00 0.00 39.86 1.75
3944 4584 6.151144 ACATGAAAGTTGCCACTAACTAATCC 59.849 38.462 0.00 0.00 39.86 3.01
3945 4585 5.876357 TGAAAGTTGCCACTAACTAATCCT 58.124 37.500 0.00 0.00 39.86 3.24
3946 4586 6.303839 TGAAAGTTGCCACTAACTAATCCTT 58.696 36.000 0.00 0.00 39.86 3.36
3947 4587 6.775629 TGAAAGTTGCCACTAACTAATCCTTT 59.224 34.615 0.00 0.00 39.86 3.11
3948 4588 7.286775 TGAAAGTTGCCACTAACTAATCCTTTT 59.713 33.333 0.00 0.00 39.86 2.27
3949 4589 6.819397 AGTTGCCACTAACTAATCCTTTTC 57.181 37.500 0.00 0.00 39.03 2.29
3950 4590 5.710567 AGTTGCCACTAACTAATCCTTTTCC 59.289 40.000 0.00 0.00 39.03 3.13
3951 4591 4.258543 TGCCACTAACTAATCCTTTTCCG 58.741 43.478 0.00 0.00 0.00 4.30
3952 4592 4.020039 TGCCACTAACTAATCCTTTTCCGA 60.020 41.667 0.00 0.00 0.00 4.55
3953 4593 4.571176 GCCACTAACTAATCCTTTTCCGAG 59.429 45.833 0.00 0.00 0.00 4.63
3954 4594 4.571176 CCACTAACTAATCCTTTTCCGAGC 59.429 45.833 0.00 0.00 0.00 5.03
3955 4595 4.571176 CACTAACTAATCCTTTTCCGAGCC 59.429 45.833 0.00 0.00 0.00 4.70
3956 4596 4.470304 ACTAACTAATCCTTTTCCGAGCCT 59.530 41.667 0.00 0.00 0.00 4.58
3957 4597 3.268023 ACTAATCCTTTTCCGAGCCTG 57.732 47.619 0.00 0.00 0.00 4.85
3958 4598 1.943340 CTAATCCTTTTCCGAGCCTGC 59.057 52.381 0.00 0.00 0.00 4.85
3959 4599 0.038166 AATCCTTTTCCGAGCCTGCA 59.962 50.000 0.00 0.00 0.00 4.41
3960 4600 0.038166 ATCCTTTTCCGAGCCTGCAA 59.962 50.000 0.00 0.00 0.00 4.08
3961 4601 0.889186 TCCTTTTCCGAGCCTGCAAC 60.889 55.000 0.00 0.00 0.00 4.17
3962 4602 1.172180 CCTTTTCCGAGCCTGCAACA 61.172 55.000 0.00 0.00 0.00 3.33
3963 4603 0.040067 CTTTTCCGAGCCTGCAACAC 60.040 55.000 0.00 0.00 0.00 3.32
3964 4604 0.749818 TTTTCCGAGCCTGCAACACA 60.750 50.000 0.00 0.00 0.00 3.72
3965 4605 0.749818 TTTCCGAGCCTGCAACACAA 60.750 50.000 0.00 0.00 0.00 3.33
3966 4606 0.537143 TTCCGAGCCTGCAACACAAT 60.537 50.000 0.00 0.00 0.00 2.71
3967 4607 1.210931 CCGAGCCTGCAACACAATG 59.789 57.895 0.00 0.00 0.00 2.82
3968 4608 1.236616 CCGAGCCTGCAACACAATGA 61.237 55.000 0.00 0.00 0.00 2.57
3969 4609 0.592637 CGAGCCTGCAACACAATGAA 59.407 50.000 0.00 0.00 0.00 2.57
3970 4610 1.200716 CGAGCCTGCAACACAATGAAT 59.799 47.619 0.00 0.00 0.00 2.57
3971 4611 2.352030 CGAGCCTGCAACACAATGAATT 60.352 45.455 0.00 0.00 0.00 2.17
3972 4612 3.248266 GAGCCTGCAACACAATGAATTC 58.752 45.455 0.00 0.00 0.00 2.17
3973 4613 2.629137 AGCCTGCAACACAATGAATTCA 59.371 40.909 11.26 11.26 0.00 2.57
3974 4614 2.733026 GCCTGCAACACAATGAATTCAC 59.267 45.455 11.07 0.00 0.00 3.18
3975 4615 3.799574 GCCTGCAACACAATGAATTCACA 60.800 43.478 11.07 0.56 0.00 3.58
3976 4616 3.985279 CCTGCAACACAATGAATTCACAG 59.015 43.478 11.07 10.45 0.00 3.66
3977 4617 3.979948 TGCAACACAATGAATTCACAGG 58.020 40.909 11.07 5.81 0.00 4.00
3978 4618 3.384146 TGCAACACAATGAATTCACAGGT 59.616 39.130 11.07 6.47 0.00 4.00
3979 4619 3.737266 GCAACACAATGAATTCACAGGTG 59.263 43.478 23.70 23.70 36.11 4.00
3980 4620 3.648339 ACACAATGAATTCACAGGTGC 57.352 42.857 24.59 0.00 34.59 5.01
3981 4621 3.225104 ACACAATGAATTCACAGGTGCT 58.775 40.909 24.59 14.92 34.59 4.40
3982 4622 4.397420 ACACAATGAATTCACAGGTGCTA 58.603 39.130 24.59 0.00 34.59 3.49
3983 4623 4.456911 ACACAATGAATTCACAGGTGCTAG 59.543 41.667 24.59 12.38 34.59 3.42
3984 4624 4.696877 CACAATGAATTCACAGGTGCTAGA 59.303 41.667 11.07 0.00 0.00 2.43
3985 4625 4.940046 ACAATGAATTCACAGGTGCTAGAG 59.060 41.667 11.07 0.00 0.00 2.43
3986 4626 2.977914 TGAATTCACAGGTGCTAGAGC 58.022 47.619 3.38 0.00 42.50 4.09
3987 4627 2.568956 TGAATTCACAGGTGCTAGAGCT 59.431 45.455 3.38 0.00 42.66 4.09
3988 4628 2.977772 ATTCACAGGTGCTAGAGCTC 57.022 50.000 5.27 5.27 42.66 4.09
3989 4629 1.930251 TTCACAGGTGCTAGAGCTCT 58.070 50.000 22.17 22.17 42.66 4.09
3990 4630 1.930251 TCACAGGTGCTAGAGCTCTT 58.070 50.000 23.84 6.22 42.66 2.85
3991 4631 1.547820 TCACAGGTGCTAGAGCTCTTG 59.452 52.381 23.84 21.31 43.96 3.02
3992 4632 1.547820 CACAGGTGCTAGAGCTCTTGA 59.452 52.381 26.42 7.69 41.96 3.02
3993 4633 2.028658 CACAGGTGCTAGAGCTCTTGAA 60.029 50.000 26.42 15.39 41.96 2.69
3994 4634 2.836981 ACAGGTGCTAGAGCTCTTGAAT 59.163 45.455 26.42 3.44 41.96 2.57
3995 4635 3.196463 CAGGTGCTAGAGCTCTTGAATG 58.804 50.000 26.42 10.37 41.96 2.67
3996 4636 3.102972 AGGTGCTAGAGCTCTTGAATGA 58.897 45.455 26.42 5.42 42.66 2.57
3997 4637 3.517100 AGGTGCTAGAGCTCTTGAATGAA 59.483 43.478 26.42 4.68 42.66 2.57
3998 4638 4.163839 AGGTGCTAGAGCTCTTGAATGAAT 59.836 41.667 26.42 5.93 42.66 2.57
3999 4639 5.365025 AGGTGCTAGAGCTCTTGAATGAATA 59.635 40.000 26.42 3.20 42.66 1.75
4000 4640 6.043012 AGGTGCTAGAGCTCTTGAATGAATAT 59.957 38.462 26.42 0.00 42.66 1.28
4001 4641 7.234371 AGGTGCTAGAGCTCTTGAATGAATATA 59.766 37.037 26.42 1.93 42.66 0.86
4002 4642 7.330700 GGTGCTAGAGCTCTTGAATGAATATAC 59.669 40.741 26.42 7.16 42.66 1.47
4003 4643 8.087750 GTGCTAGAGCTCTTGAATGAATATACT 58.912 37.037 26.42 0.00 42.66 2.12
4004 4644 8.303156 TGCTAGAGCTCTTGAATGAATATACTC 58.697 37.037 26.42 6.52 42.66 2.59
4005 4645 7.759433 GCTAGAGCTCTTGAATGAATATACTCC 59.241 40.741 26.42 2.24 38.21 3.85
4006 4646 7.003402 AGAGCTCTTGAATGAATATACTCCC 57.997 40.000 11.45 0.00 0.00 4.30
4007 4647 6.786959 AGAGCTCTTGAATGAATATACTCCCT 59.213 38.462 11.45 0.00 0.00 4.20
4008 4648 7.003402 AGCTCTTGAATGAATATACTCCCTC 57.997 40.000 0.00 0.00 0.00 4.30
4009 4649 6.013812 AGCTCTTGAATGAATATACTCCCTCC 60.014 42.308 0.00 0.00 0.00 4.30
4010 4650 6.346477 TCTTGAATGAATATACTCCCTCCG 57.654 41.667 0.00 0.00 0.00 4.63
4011 4651 5.839063 TCTTGAATGAATATACTCCCTCCGT 59.161 40.000 0.00 0.00 0.00 4.69
4012 4652 7.008332 TCTTGAATGAATATACTCCCTCCGTA 58.992 38.462 0.00 0.00 0.00 4.02
4013 4653 7.507956 TCTTGAATGAATATACTCCCTCCGTAA 59.492 37.037 0.00 0.00 0.00 3.18
4014 4654 7.606135 TGAATGAATATACTCCCTCCGTAAA 57.394 36.000 0.00 0.00 0.00 2.01
4015 4655 7.667557 TGAATGAATATACTCCCTCCGTAAAG 58.332 38.462 0.00 0.00 0.00 1.85
4016 4656 6.607004 ATGAATATACTCCCTCCGTAAAGG 57.393 41.667 0.00 0.00 42.97 3.11
4031 4671 8.557592 CTCCGTAAAGGGAGTAAGTTTTATTT 57.442 34.615 10.01 0.00 46.97 1.40
4032 4672 8.326680 TCCGTAAAGGGAGTAAGTTTTATTTG 57.673 34.615 0.00 0.00 41.52 2.32
4033 4673 7.025365 CCGTAAAGGGAGTAAGTTTTATTTGC 58.975 38.462 0.00 0.00 35.97 3.68
4034 4674 7.094506 CCGTAAAGGGAGTAAGTTTTATTTGCT 60.095 37.037 0.00 0.00 35.97 3.91
4035 4675 7.749126 CGTAAAGGGAGTAAGTTTTATTTGCTG 59.251 37.037 0.00 0.00 0.00 4.41
4036 4676 5.644977 AGGGAGTAAGTTTTATTTGCTGC 57.355 39.130 0.00 0.00 0.00 5.25
4037 4677 4.462834 AGGGAGTAAGTTTTATTTGCTGCC 59.537 41.667 5.69 5.69 44.88 4.85
4038 4678 4.462834 GGGAGTAAGTTTTATTTGCTGCCT 59.537 41.667 0.00 0.00 42.55 4.75
4039 4679 5.402398 GGAGTAAGTTTTATTTGCTGCCTG 58.598 41.667 0.00 0.00 0.00 4.85
4040 4680 4.809673 AGTAAGTTTTATTTGCTGCCTGC 58.190 39.130 0.00 0.00 43.25 4.85
4041 4681 4.524328 AGTAAGTTTTATTTGCTGCCTGCT 59.476 37.500 0.00 0.00 43.37 4.24
4042 4682 3.308438 AGTTTTATTTGCTGCCTGCTG 57.692 42.857 0.00 0.00 43.37 4.41
4043 4683 2.028748 AGTTTTATTTGCTGCCTGCTGG 60.029 45.455 5.03 5.03 43.37 4.85
4044 4684 1.921982 TTTATTTGCTGCCTGCTGGA 58.078 45.000 14.77 0.00 43.37 3.86
4045 4685 1.921982 TTATTTGCTGCCTGCTGGAA 58.078 45.000 14.77 0.88 43.37 3.53
4046 4686 1.176527 TATTTGCTGCCTGCTGGAAC 58.823 50.000 14.77 1.94 43.37 3.62
4047 4687 0.541296 ATTTGCTGCCTGCTGGAACT 60.541 50.000 14.77 0.00 43.37 3.01
4048 4688 1.174712 TTTGCTGCCTGCTGGAACTC 61.175 55.000 14.77 0.00 43.37 3.01
4049 4689 2.060567 TTGCTGCCTGCTGGAACTCT 62.061 55.000 14.77 0.00 43.37 3.24
4050 4690 1.303155 GCTGCCTGCTGGAACTCTT 60.303 57.895 14.77 0.00 38.95 2.85
4051 4691 1.584380 GCTGCCTGCTGGAACTCTTG 61.584 60.000 14.77 0.00 38.95 3.02
4052 4692 1.584380 CTGCCTGCTGGAACTCTTGC 61.584 60.000 14.77 0.00 34.57 4.01
4053 4693 1.303155 GCCTGCTGGAACTCTTGCT 60.303 57.895 14.77 0.00 34.57 3.91
4054 4694 1.304509 GCCTGCTGGAACTCTTGCTC 61.305 60.000 14.77 0.00 34.57 4.26
4055 4695 0.035881 CCTGCTGGAACTCTTGCTCA 59.964 55.000 2.92 0.00 34.57 4.26
4056 4696 1.339824 CCTGCTGGAACTCTTGCTCAT 60.340 52.381 2.92 0.00 34.57 2.90
4057 4697 1.738350 CTGCTGGAACTCTTGCTCATG 59.262 52.381 0.00 0.00 0.00 3.07
4058 4698 1.072806 TGCTGGAACTCTTGCTCATGT 59.927 47.619 0.00 0.00 0.00 3.21
4059 4699 2.302733 TGCTGGAACTCTTGCTCATGTA 59.697 45.455 0.00 0.00 0.00 2.29
4060 4700 3.244526 TGCTGGAACTCTTGCTCATGTAA 60.245 43.478 0.00 0.00 0.00 2.41
4061 4701 3.126000 GCTGGAACTCTTGCTCATGTAAC 59.874 47.826 0.00 0.00 0.00 2.50
4062 4702 3.325870 TGGAACTCTTGCTCATGTAACG 58.674 45.455 0.00 0.00 0.00 3.18
4063 4703 3.006430 TGGAACTCTTGCTCATGTAACGA 59.994 43.478 0.00 0.00 0.00 3.85
4064 4704 3.994392 GGAACTCTTGCTCATGTAACGAA 59.006 43.478 0.00 0.00 0.00 3.85
4065 4705 4.092091 GGAACTCTTGCTCATGTAACGAAG 59.908 45.833 0.00 0.00 0.00 3.79
4066 4706 4.521130 ACTCTTGCTCATGTAACGAAGA 57.479 40.909 0.00 0.00 0.00 2.87
4067 4707 4.883083 ACTCTTGCTCATGTAACGAAGAA 58.117 39.130 0.00 0.00 0.00 2.52
4068 4708 5.297547 ACTCTTGCTCATGTAACGAAGAAA 58.702 37.500 0.00 0.00 0.00 2.52
4069 4709 5.934625 ACTCTTGCTCATGTAACGAAGAAAT 59.065 36.000 0.00 0.00 0.00 2.17
4070 4710 6.091441 ACTCTTGCTCATGTAACGAAGAAATC 59.909 38.462 0.00 0.00 0.00 2.17
4071 4711 5.931724 TCTTGCTCATGTAACGAAGAAATCA 59.068 36.000 0.00 0.00 0.00 2.57
4072 4712 5.784750 TGCTCATGTAACGAAGAAATCAG 57.215 39.130 0.00 0.00 0.00 2.90
4073 4713 4.631377 TGCTCATGTAACGAAGAAATCAGG 59.369 41.667 0.00 0.00 0.00 3.86
4074 4714 4.494855 GCTCATGTAACGAAGAAATCAGGC 60.495 45.833 0.00 0.00 0.00 4.85
4075 4715 4.574892 TCATGTAACGAAGAAATCAGGCA 58.425 39.130 0.00 0.00 0.00 4.75
4076 4716 4.631377 TCATGTAACGAAGAAATCAGGCAG 59.369 41.667 0.00 0.00 0.00 4.85
4077 4717 3.334691 TGTAACGAAGAAATCAGGCAGG 58.665 45.455 0.00 0.00 0.00 4.85
4078 4718 1.168714 AACGAAGAAATCAGGCAGGC 58.831 50.000 0.00 0.00 0.00 4.85
4079 4719 0.326264 ACGAAGAAATCAGGCAGGCT 59.674 50.000 0.00 0.00 0.00 4.58
4080 4720 0.731417 CGAAGAAATCAGGCAGGCTG 59.269 55.000 18.07 18.07 0.00 4.85
4081 4721 1.676916 CGAAGAAATCAGGCAGGCTGA 60.677 52.381 27.66 27.66 35.13 4.26
4082 4722 2.652590 GAAGAAATCAGGCAGGCTGAT 58.347 47.619 29.44 29.44 42.68 2.90
4083 4723 3.742327 CGAAGAAATCAGGCAGGCTGATA 60.742 47.826 33.51 13.39 40.29 2.15
4084 4724 3.488778 AGAAATCAGGCAGGCTGATAG 57.511 47.619 33.51 6.31 40.29 2.08
4085 4725 3.044156 AGAAATCAGGCAGGCTGATAGA 58.956 45.455 33.51 12.31 40.29 1.98
4086 4726 3.457380 AGAAATCAGGCAGGCTGATAGAA 59.543 43.478 33.51 11.94 40.29 2.10
4087 4727 3.488778 AATCAGGCAGGCTGATAGAAG 57.511 47.619 33.51 4.45 40.29 2.85
4088 4728 2.165357 TCAGGCAGGCTGATAGAAGA 57.835 50.000 22.49 3.59 0.00 2.87
4089 4729 2.470990 TCAGGCAGGCTGATAGAAGAA 58.529 47.619 22.49 0.00 0.00 2.52
4090 4730 2.840038 TCAGGCAGGCTGATAGAAGAAA 59.160 45.455 22.49 0.00 0.00 2.52
4091 4731 3.264193 TCAGGCAGGCTGATAGAAGAAAA 59.736 43.478 22.49 0.00 0.00 2.29
4092 4732 4.080129 TCAGGCAGGCTGATAGAAGAAAAT 60.080 41.667 22.49 0.00 0.00 1.82
4093 4733 4.643784 CAGGCAGGCTGATAGAAGAAAATT 59.356 41.667 20.86 0.00 0.00 1.82
4094 4734 5.824624 CAGGCAGGCTGATAGAAGAAAATTA 59.175 40.000 20.86 0.00 0.00 1.40
4095 4735 6.489361 CAGGCAGGCTGATAGAAGAAAATTAT 59.511 38.462 20.86 0.00 0.00 1.28
4096 4736 7.663081 CAGGCAGGCTGATAGAAGAAAATTATA 59.337 37.037 20.86 0.00 0.00 0.98
4097 4737 7.663493 AGGCAGGCTGATAGAAGAAAATTATAC 59.337 37.037 20.86 0.00 0.00 1.47
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 41 0.991920 ATTTCCGGACCAGTGGATGT 59.008 50.000 18.40 0.00 33.42 3.06
76 84 0.027194 CGCCTGAAAGACATCGCATG 59.973 55.000 0.00 0.00 34.07 4.06
149 157 0.251742 CACCCATTTCTTCAGGGCCA 60.252 55.000 6.18 0.00 46.88 5.36
227 235 3.956744 ACTGTGCTAAAATCTTCCCCTC 58.043 45.455 0.00 0.00 0.00 4.30
278 287 1.674962 GCCACCATCTCTGAAGATTGC 59.325 52.381 0.00 0.00 40.38 3.56
328 338 1.314730 GCCTCCGTTTCAAAAGGTGA 58.685 50.000 5.81 0.00 0.00 4.02
329 339 0.040425 CGCCTCCGTTTCAAAAGGTG 60.040 55.000 1.72 0.00 33.45 4.00
330 340 1.170290 CCGCCTCCGTTTCAAAAGGT 61.170 55.000 1.72 0.00 0.00 3.50
341 351 1.226974 CATGACACTACCGCCTCCG 60.227 63.158 0.00 0.00 0.00 4.63
385 395 7.751348 GTCATCATCATCGTCATAAGGTACTAC 59.249 40.741 0.00 0.00 38.49 2.73
391 401 5.144692 AGGTCATCATCATCGTCATAAGG 57.855 43.478 0.00 0.00 0.00 2.69
399 424 7.545362 AAGAGTTAAAAGGTCATCATCATCG 57.455 36.000 0.00 0.00 0.00 3.84
434 462 4.755411 ACTCAACTCAGAGTGAAACGAAA 58.245 39.130 3.05 0.00 46.58 3.46
472 503 2.821969 ACCCTTGACATTTTGCTAGCTG 59.178 45.455 17.23 8.25 0.00 4.24
505 536 5.336610 CCATGGAAATACACATGTTGCTTGA 60.337 40.000 5.56 0.00 42.15 3.02
509 540 4.717233 TCCATGGAAATACACATGTTGC 57.283 40.909 13.46 0.00 42.15 4.17
532 564 8.638565 CACAAATCCACGAGTAAAATCAAAATC 58.361 33.333 0.00 0.00 0.00 2.17
533 565 7.598493 CCACAAATCCACGAGTAAAATCAAAAT 59.402 33.333 0.00 0.00 0.00 1.82
548 580 2.562298 TCTGCCAATTCCACAAATCCAC 59.438 45.455 0.00 0.00 0.00 4.02
563 595 3.490439 TGAAGTTCAGAACATCTGCCA 57.510 42.857 17.27 3.53 43.95 4.92
564 596 4.276926 AGTTTGAAGTTCAGAACATCTGCC 59.723 41.667 21.97 6.85 43.95 4.85
596 628 7.749539 ACAAGTAACCAAAAAGTTTGATTCG 57.250 32.000 2.30 0.00 0.00 3.34
733 804 8.119891 AGTTGTAACCCAATACCCATATTTTCT 58.880 33.333 0.00 0.00 35.02 2.52
734 805 8.301252 AGTTGTAACCCAATACCCATATTTTC 57.699 34.615 0.00 0.00 35.02 2.29
747 818 3.469739 GTTCTTCCGAGTTGTAACCCAA 58.530 45.455 0.00 0.00 0.00 4.12
952 1038 1.831286 GCCGATTCCCCGACTCCTA 60.831 63.158 0.00 0.00 0.00 2.94
975 1061 1.146263 CCCTGCGGATCCTACAACC 59.854 63.158 10.75 0.00 0.00 3.77
1158 1254 2.496817 GCGCCCTCTCACCTGTAG 59.503 66.667 0.00 0.00 0.00 2.74
1179 1275 6.214412 AGAAGGAAGAAGATCTCCAAGCTAAA 59.786 38.462 0.00 0.00 0.00 1.85
1217 1316 2.126965 CCCGTCACGACTCACGAC 60.127 66.667 0.00 0.00 45.77 4.34
1218 1317 3.359523 CCCCGTCACGACTCACGA 61.360 66.667 0.00 0.00 45.77 4.35
1220 1319 1.139095 GATCCCCGTCACGACTCAC 59.861 63.158 0.00 0.00 0.00 3.51
1221 1320 1.001269 AGATCCCCGTCACGACTCA 60.001 57.895 0.00 0.00 0.00 3.41
1222 1321 1.728672 GAGATCCCCGTCACGACTC 59.271 63.158 0.00 0.00 0.00 3.36
1223 1322 2.113433 CGAGATCCCCGTCACGACT 61.113 63.158 0.00 0.00 34.75 4.18
1224 1323 2.404995 ACGAGATCCCCGTCACGAC 61.405 63.158 0.00 0.00 34.97 4.34
1242 1341 0.981183 AACCTGCAAGATACCGGACA 59.019 50.000 9.46 0.00 34.07 4.02
1243 1342 1.737793 CAAACCTGCAAGATACCGGAC 59.262 52.381 9.46 0.00 34.07 4.79
1244 1343 2.107950 CAAACCTGCAAGATACCGGA 57.892 50.000 9.46 0.00 34.07 5.14
1280 1379 0.386858 TCGACGCCGTGAAGAAGAAG 60.387 55.000 0.00 0.00 37.05 2.85
1391 1490 2.662156 GACGGTAAAAGAGAGCAACGAG 59.338 50.000 0.00 0.00 0.00 4.18
1425 1937 4.015084 ACCAAGATCAGCTTTCCAAGATG 58.985 43.478 0.00 0.00 45.90 2.90
1433 1945 4.463891 CCCAACAATACCAAGATCAGCTTT 59.536 41.667 0.00 0.00 33.60 3.51
1440 1952 3.052642 AGCATCCCCAACAATACCAAGAT 60.053 43.478 0.00 0.00 0.00 2.40
1454 1966 4.161001 ACAGAATCAAAATCAAGCATCCCC 59.839 41.667 0.00 0.00 0.00 4.81
1469 1981 4.159693 AGCACTACGATTACCACAGAATCA 59.840 41.667 0.00 0.00 33.66 2.57
1474 1986 6.903883 ATTAAAGCACTACGATTACCACAG 57.096 37.500 0.00 0.00 0.00 3.66
1478 1990 6.036735 TGCTGAATTAAAGCACTACGATTACC 59.963 38.462 10.48 0.00 45.50 2.85
1479 1991 7.000575 TGCTGAATTAAAGCACTACGATTAC 57.999 36.000 10.48 0.00 45.50 1.89
1495 2007 5.723295 ACTTGTCAAAGTTGTTGCTGAATT 58.277 33.333 0.00 0.00 44.47 2.17
1511 2023 5.929415 TGATGTAAAGCGTCATAACTTGTCA 59.071 36.000 0.00 0.00 38.14 3.58
1513 2025 6.203915 TGTTGATGTAAAGCGTCATAACTTGT 59.796 34.615 0.00 0.00 42.18 3.16
1514 2026 6.598525 TGTTGATGTAAAGCGTCATAACTTG 58.401 36.000 0.00 0.00 42.18 3.16
1515 2027 6.649141 TCTGTTGATGTAAAGCGTCATAACTT 59.351 34.615 0.00 0.00 42.18 2.66
1516 2028 6.163476 TCTGTTGATGTAAAGCGTCATAACT 58.837 36.000 0.00 0.00 42.18 2.24
1517 2029 6.403333 TCTGTTGATGTAAAGCGTCATAAC 57.597 37.500 0.00 0.00 42.18 1.89
1518 2030 6.871492 TCTTCTGTTGATGTAAAGCGTCATAA 59.129 34.615 0.00 0.00 42.18 1.90
1519 2031 6.394809 TCTTCTGTTGATGTAAAGCGTCATA 58.605 36.000 0.00 0.00 42.18 2.15
1521 2033 4.627058 TCTTCTGTTGATGTAAAGCGTCA 58.373 39.130 0.00 0.00 41.04 4.35
1522 2034 5.591643 TTCTTCTGTTGATGTAAAGCGTC 57.408 39.130 0.00 0.00 0.00 5.19
1523 2035 5.527582 AGTTTCTTCTGTTGATGTAAAGCGT 59.472 36.000 0.00 0.00 0.00 5.07
1525 2037 7.417612 TGAAGTTTCTTCTGTTGATGTAAAGC 58.582 34.615 10.21 0.00 0.00 3.51
1526 2038 9.787532 TTTGAAGTTTCTTCTGTTGATGTAAAG 57.212 29.630 10.21 0.00 0.00 1.85
1528 2040 9.734620 CATTTGAAGTTTCTTCTGTTGATGTAA 57.265 29.630 10.21 0.00 0.00 2.41
1530 2042 7.999679 TCATTTGAAGTTTCTTCTGTTGATGT 58.000 30.769 10.21 0.00 0.00 3.06
1531 2043 8.133627 ACTCATTTGAAGTTTCTTCTGTTGATG 58.866 33.333 10.21 7.47 0.00 3.07
1532 2044 8.230472 ACTCATTTGAAGTTTCTTCTGTTGAT 57.770 30.769 10.21 0.00 0.00 2.57
1534 2046 8.693542 AAACTCATTTGAAGTTTCTTCTGTTG 57.306 30.769 10.21 5.78 30.99 3.33
1559 2101 2.642311 TCCTGCTCTACAATTGGAACCA 59.358 45.455 10.83 0.00 0.00 3.67
1595 2139 7.630242 ACTGAACAGTGAATTCTCTTTTGAA 57.370 32.000 12.35 2.39 40.75 2.69
1616 2160 7.513190 TTTGAATTACAAACGTTTTCCACTG 57.487 32.000 11.66 1.96 42.57 3.66
1645 2189 2.535166 CAGGCACACAATTCGTTTGTTG 59.465 45.455 4.18 7.39 46.51 3.33
1648 2192 2.033299 ACTCAGGCACACAATTCGTTTG 59.967 45.455 0.00 0.36 41.36 2.93
1650 2194 1.967319 ACTCAGGCACACAATTCGTT 58.033 45.000 0.00 0.00 0.00 3.85
1652 2196 2.688507 ACTACTCAGGCACACAATTCG 58.311 47.619 0.00 0.00 0.00 3.34
1659 2203 6.048732 TGAAATCAATACTACTCAGGCACA 57.951 37.500 0.00 0.00 0.00 4.57
1661 2205 7.828717 TGAAATGAAATCAATACTACTCAGGCA 59.171 33.333 0.00 0.00 0.00 4.75
1679 2223 3.385193 TCAGACTCGCACTGAAATGAA 57.615 42.857 0.00 0.00 40.70 2.57
1680 2224 3.599730 ATCAGACTCGCACTGAAATGA 57.400 42.857 0.00 0.00 45.44 2.57
1681 2225 5.980698 ATAATCAGACTCGCACTGAAATG 57.019 39.130 0.00 0.00 45.44 2.32
1682 2226 6.648310 CCATATAATCAGACTCGCACTGAAAT 59.352 38.462 0.00 0.00 45.44 2.17
1683 2227 5.985530 CCATATAATCAGACTCGCACTGAAA 59.014 40.000 0.00 0.00 45.44 2.69
1684 2228 5.301805 TCCATATAATCAGACTCGCACTGAA 59.698 40.000 0.00 0.00 45.44 3.02
1691 2235 6.870439 TGCATTCTTCCATATAATCAGACTCG 59.130 38.462 0.00 0.00 0.00 4.18
1728 2272 8.262227 ACCGGTTTCTGTCTTTCACATAATATA 58.738 33.333 0.00 0.00 33.23 0.86
1729 2273 7.065803 CACCGGTTTCTGTCTTTCACATAATAT 59.934 37.037 2.97 0.00 33.23 1.28
1730 2274 6.370442 CACCGGTTTCTGTCTTTCACATAATA 59.630 38.462 2.97 0.00 33.23 0.98
1808 2352 4.278170 CCACATGCTTCAGGTTTAAACTCA 59.722 41.667 17.50 7.19 0.00 3.41
1880 2424 8.887264 AAGTTCTCAAGGTTCTCTATAGAAGA 57.113 34.615 3.57 1.25 42.40 2.87
1895 2439 5.122512 TGAAGACCTCGTAAGTTCTCAAG 57.877 43.478 0.00 0.00 39.48 3.02
1897 2441 5.723672 ATTGAAGACCTCGTAAGTTCTCA 57.276 39.130 0.00 0.00 39.48 3.27
2073 2625 1.279271 CTCTGGGGAAGGTGTAACAGG 59.721 57.143 0.00 0.00 39.98 4.00
2094 2646 6.974965 AGTCAAATCTCACAATTGGAGAAAC 58.025 36.000 22.39 18.19 44.01 2.78
2174 2728 9.221775 GAATTTAGAAACATACAAACATAGGCG 57.778 33.333 0.00 0.00 0.00 5.52
2218 2772 4.761235 AGACGTCTTATCTCAACAACGA 57.239 40.909 13.58 0.00 34.46 3.85
2299 2853 0.183492 ACAAGACTTGCTTCCTGCCA 59.817 50.000 15.24 0.00 42.00 4.92
2411 2965 2.682856 CACCACCAATAAGCGCAGTTAT 59.317 45.455 11.47 2.67 0.00 1.89
2419 2973 4.461081 TGTCCAATAACACCACCAATAAGC 59.539 41.667 0.00 0.00 0.00 3.09
2649 3207 0.725686 CTGCTGCAAGAAGTCCATCG 59.274 55.000 3.02 0.00 33.69 3.84
2826 3384 3.025866 GTACCCGCTGTACTGAACG 57.974 57.895 3.61 0.00 45.32 3.95
2898 3456 9.309516 TGACTCAAAGATGATTACGGTATTTAC 57.690 33.333 0.00 0.00 34.37 2.01
3178 3736 3.130340 TGAACAAGGCCACTTTTCAAGAC 59.870 43.478 5.01 0.00 34.19 3.01
3186 3744 6.207810 TCGTAAATAAATGAACAAGGCCACTT 59.792 34.615 5.01 0.00 37.43 3.16
3192 3750 6.905076 CACCGATCGTAAATAAATGAACAAGG 59.095 38.462 15.09 0.00 0.00 3.61
3193 3751 7.680982 TCACCGATCGTAAATAAATGAACAAG 58.319 34.615 15.09 0.00 0.00 3.16
3225 3783 6.892658 ACACTAATGCTAAATCAACAACCA 57.107 33.333 0.00 0.00 0.00 3.67
3401 3964 2.630580 GAGGTGGTCTTATAGGCTCCAG 59.369 54.545 0.00 0.00 0.00 3.86
3416 3979 4.010349 GTTCTGGTTAATTGAGGAGGTGG 58.990 47.826 0.00 0.00 0.00 4.61
3465 4105 8.563732 GCAGGATTTAATCTTCCAGTTATCTTC 58.436 37.037 4.87 0.00 34.27 2.87
3526 4166 3.196685 TGCAAAACTGCCCAACTTTTACT 59.803 39.130 0.00 0.00 0.00 2.24
3571 4211 4.816925 GGTCCAACTATCTTTATGTGGAGC 59.183 45.833 4.16 4.16 35.92 4.70
3623 4263 9.455847 GAACCTTCTGATTATTTGTAATGCATC 57.544 33.333 0.00 0.00 0.00 3.91
3665 4305 6.389830 AATGTCTTGTGATTGTTTGTAGCA 57.610 33.333 0.00 0.00 0.00 3.49
3666 4306 8.795786 TTAAATGTCTTGTGATTGTTTGTAGC 57.204 30.769 0.00 0.00 0.00 3.58
3667 4307 9.950680 ACTTAAATGTCTTGTGATTGTTTGTAG 57.049 29.630 0.00 0.00 0.00 2.74
3692 4332 9.530129 CTACAAACGATCAAGATTTGAGTTTAC 57.470 33.333 12.93 0.00 43.98 2.01
3711 4351 0.517316 CGCCCACTCTTGCTACAAAC 59.483 55.000 0.00 0.00 0.00 2.93
3712 4352 1.234615 GCGCCCACTCTTGCTACAAA 61.235 55.000 0.00 0.00 0.00 2.83
3713 4353 1.671054 GCGCCCACTCTTGCTACAA 60.671 57.895 0.00 0.00 0.00 2.41
3714 4354 2.047274 GCGCCCACTCTTGCTACA 60.047 61.111 0.00 0.00 0.00 2.74
3715 4355 2.103042 CAGCGCCCACTCTTGCTAC 61.103 63.158 2.29 0.00 35.56 3.58
3716 4356 2.265739 CAGCGCCCACTCTTGCTA 59.734 61.111 2.29 0.00 35.56 3.49
3719 4359 3.429141 CAGCAGCGCCCACTCTTG 61.429 66.667 2.29 0.00 0.00 3.02
3720 4360 3.630013 TCAGCAGCGCCCACTCTT 61.630 61.111 2.29 0.00 0.00 2.85
3721 4361 4.385405 GTCAGCAGCGCCCACTCT 62.385 66.667 2.29 0.00 0.00 3.24
3722 4362 3.890936 AAGTCAGCAGCGCCCACTC 62.891 63.158 2.29 0.00 0.00 3.51
3723 4363 3.482232 AAAGTCAGCAGCGCCCACT 62.482 57.895 2.29 0.00 0.00 4.00
3724 4364 2.980233 AAAGTCAGCAGCGCCCAC 60.980 61.111 2.29 0.00 0.00 4.61
3725 4365 2.390306 TACAAAGTCAGCAGCGCCCA 62.390 55.000 2.29 0.00 0.00 5.36
3726 4366 1.026718 ATACAAAGTCAGCAGCGCCC 61.027 55.000 2.29 0.00 0.00 6.13
3727 4367 0.097674 CATACAAAGTCAGCAGCGCC 59.902 55.000 2.29 0.00 0.00 6.53
3728 4368 0.798776 ACATACAAAGTCAGCAGCGC 59.201 50.000 0.00 0.00 0.00 5.92
3729 4369 2.068519 TCACATACAAAGTCAGCAGCG 58.931 47.619 0.00 0.00 0.00 5.18
3730 4370 3.748048 TCTTCACATACAAAGTCAGCAGC 59.252 43.478 0.00 0.00 0.00 5.25
3731 4371 6.148315 TGAATCTTCACATACAAAGTCAGCAG 59.852 38.462 0.00 0.00 31.01 4.24
3732 4372 5.997129 TGAATCTTCACATACAAAGTCAGCA 59.003 36.000 0.00 0.00 31.01 4.41
3733 4373 6.148480 ACTGAATCTTCACATACAAAGTCAGC 59.852 38.462 0.00 0.00 32.76 4.26
3734 4374 7.664082 ACTGAATCTTCACATACAAAGTCAG 57.336 36.000 0.00 0.00 34.36 3.51
3735 4375 9.725019 ATAACTGAATCTTCACATACAAAGTCA 57.275 29.630 0.00 0.00 32.90 3.41
3745 4385 9.863845 TCGTATTTGTATAACTGAATCTTCACA 57.136 29.630 0.00 0.00 32.90 3.58
3754 4394 9.459640 GCTGATAGTTCGTATTTGTATAACTGA 57.540 33.333 0.00 0.00 32.85 3.41
3755 4395 8.700644 GGCTGATAGTTCGTATTTGTATAACTG 58.299 37.037 0.00 0.00 32.85 3.16
3756 4396 7.871463 GGGCTGATAGTTCGTATTTGTATAACT 59.129 37.037 0.00 0.00 34.86 2.24
3757 4397 7.148853 CGGGCTGATAGTTCGTATTTGTATAAC 60.149 40.741 0.00 0.00 0.00 1.89
3758 4398 6.864685 CGGGCTGATAGTTCGTATTTGTATAA 59.135 38.462 0.00 0.00 0.00 0.98
3759 4399 6.384224 CGGGCTGATAGTTCGTATTTGTATA 58.616 40.000 0.00 0.00 0.00 1.47
3760 4400 5.227908 CGGGCTGATAGTTCGTATTTGTAT 58.772 41.667 0.00 0.00 0.00 2.29
3761 4401 4.613944 CGGGCTGATAGTTCGTATTTGTA 58.386 43.478 0.00 0.00 0.00 2.41
3762 4402 3.454375 CGGGCTGATAGTTCGTATTTGT 58.546 45.455 0.00 0.00 0.00 2.83
3763 4403 2.221055 GCGGGCTGATAGTTCGTATTTG 59.779 50.000 0.00 0.00 0.00 2.32
3764 4404 2.159014 TGCGGGCTGATAGTTCGTATTT 60.159 45.455 0.00 0.00 0.00 1.40
3765 4405 1.411246 TGCGGGCTGATAGTTCGTATT 59.589 47.619 0.00 0.00 0.00 1.89
3766 4406 1.000163 CTGCGGGCTGATAGTTCGTAT 60.000 52.381 0.00 0.00 0.00 3.06
3767 4407 0.384309 CTGCGGGCTGATAGTTCGTA 59.616 55.000 0.00 0.00 0.00 3.43
3768 4408 1.141881 CTGCGGGCTGATAGTTCGT 59.858 57.895 0.00 0.00 0.00 3.85
3769 4409 2.240500 GCTGCGGGCTGATAGTTCG 61.241 63.158 0.00 0.00 38.06 3.95
3770 4410 1.153369 TGCTGCGGGCTGATAGTTC 60.153 57.895 0.00 0.00 42.39 3.01
3771 4411 1.153289 CTGCTGCGGGCTGATAGTT 60.153 57.895 0.00 0.00 41.52 2.24
3772 4412 2.503061 CTGCTGCGGGCTGATAGT 59.497 61.111 0.00 0.00 41.52 2.12
3773 4413 2.971413 GCTGCTGCGGGCTGATAG 60.971 66.667 10.99 0.00 41.52 2.08
3774 4414 3.745240 CTGCTGCTGCGGGCTGATA 62.745 63.158 16.16 0.00 43.34 2.15
3783 4423 3.126225 GAGTGCCTCTGCTGCTGC 61.126 66.667 8.89 8.89 38.71 5.25
3784 4424 2.776670 TTCGAGTGCCTCTGCTGCTG 62.777 60.000 0.00 0.00 38.71 4.41
3785 4425 2.504163 CTTCGAGTGCCTCTGCTGCT 62.504 60.000 0.00 0.00 38.71 4.24
3786 4426 2.047844 TTCGAGTGCCTCTGCTGC 60.048 61.111 0.00 0.00 38.71 5.25
3787 4427 1.447489 CCTTCGAGTGCCTCTGCTG 60.447 63.158 0.00 0.00 38.71 4.41
3788 4428 1.882989 GACCTTCGAGTGCCTCTGCT 61.883 60.000 0.00 0.00 38.71 4.24
3789 4429 1.446966 GACCTTCGAGTGCCTCTGC 60.447 63.158 0.00 0.00 38.26 4.26
3790 4430 0.172352 GAGACCTTCGAGTGCCTCTG 59.828 60.000 0.00 0.00 0.00 3.35
3791 4431 2.573920 GAGACCTTCGAGTGCCTCT 58.426 57.895 0.00 0.00 0.00 3.69
3801 4441 1.739562 CTGCTGCCACGAGACCTTC 60.740 63.158 0.00 0.00 0.00 3.46
3802 4442 1.758440 TTCTGCTGCCACGAGACCTT 61.758 55.000 0.00 0.00 0.00 3.50
3803 4443 1.758440 TTTCTGCTGCCACGAGACCT 61.758 55.000 0.00 0.00 0.00 3.85
3804 4444 1.301716 TTTCTGCTGCCACGAGACC 60.302 57.895 0.00 0.00 0.00 3.85
3805 4445 0.880278 TGTTTCTGCTGCCACGAGAC 60.880 55.000 0.00 0.00 0.00 3.36
3806 4446 0.601046 CTGTTTCTGCTGCCACGAGA 60.601 55.000 0.00 0.00 0.00 4.04
3807 4447 1.864862 CTGTTTCTGCTGCCACGAG 59.135 57.895 0.00 0.00 0.00 4.18
3808 4448 2.253758 GCTGTTTCTGCTGCCACGA 61.254 57.895 0.00 0.00 0.00 4.35
3809 4449 2.253452 GCTGTTTCTGCTGCCACG 59.747 61.111 0.00 0.00 0.00 4.94
3810 4450 1.285023 CTGCTGTTTCTGCTGCCAC 59.715 57.895 0.00 0.00 33.25 5.01
3811 4451 2.558286 GCTGCTGTTTCTGCTGCCA 61.558 57.895 15.28 0.00 43.33 4.92
3812 4452 2.257676 GCTGCTGTTTCTGCTGCC 59.742 61.111 15.28 3.29 43.33 4.85
3813 4453 1.371389 GTGCTGCTGTTTCTGCTGC 60.371 57.895 17.83 17.83 46.82 5.25
3814 4454 0.317603 GTGTGCTGCTGTTTCTGCTG 60.318 55.000 0.00 0.00 32.95 4.41
3815 4455 1.779025 CGTGTGCTGCTGTTTCTGCT 61.779 55.000 0.00 0.00 32.95 4.24
3816 4456 1.369689 CGTGTGCTGCTGTTTCTGC 60.370 57.895 0.00 0.00 0.00 4.26
3817 4457 1.280746 CCGTGTGCTGCTGTTTCTG 59.719 57.895 0.00 0.00 0.00 3.02
3818 4458 1.153168 ACCGTGTGCTGCTGTTTCT 60.153 52.632 0.00 0.00 0.00 2.52
3819 4459 1.009675 CACCGTGTGCTGCTGTTTC 60.010 57.895 0.00 0.00 0.00 2.78
3820 4460 1.029408 TTCACCGTGTGCTGCTGTTT 61.029 50.000 0.00 0.00 32.98 2.83
3821 4461 1.451207 TTCACCGTGTGCTGCTGTT 60.451 52.632 0.00 0.00 32.98 3.16
3822 4462 2.180204 GTTCACCGTGTGCTGCTGT 61.180 57.895 0.00 0.00 32.98 4.40
3823 4463 2.109538 CTGTTCACCGTGTGCTGCTG 62.110 60.000 0.00 0.00 32.98 4.41
3824 4464 1.889105 CTGTTCACCGTGTGCTGCT 60.889 57.895 0.00 0.00 32.98 4.24
3825 4465 2.633657 CTGTTCACCGTGTGCTGC 59.366 61.111 0.00 0.00 32.98 5.25
3826 4466 2.896801 GCCTGTTCACCGTGTGCTG 61.897 63.158 0.00 0.00 32.98 4.41
3827 4467 2.591715 GCCTGTTCACCGTGTGCT 60.592 61.111 0.00 0.00 32.98 4.40
3828 4468 2.591715 AGCCTGTTCACCGTGTGC 60.592 61.111 0.00 0.00 32.98 4.57
3829 4469 2.896801 GCAGCCTGTTCACCGTGTG 61.897 63.158 0.00 0.00 34.45 3.82
3830 4470 2.591715 GCAGCCTGTTCACCGTGT 60.592 61.111 0.00 0.00 0.00 4.49
3831 4471 1.723608 TTTGCAGCCTGTTCACCGTG 61.724 55.000 0.00 0.00 0.00 4.94
3832 4472 1.034838 TTTTGCAGCCTGTTCACCGT 61.035 50.000 0.00 0.00 0.00 4.83
3833 4473 0.318107 CTTTTGCAGCCTGTTCACCG 60.318 55.000 0.00 0.00 0.00 4.94
3834 4474 0.032540 CCTTTTGCAGCCTGTTCACC 59.967 55.000 0.00 0.00 0.00 4.02
3835 4475 1.032014 TCCTTTTGCAGCCTGTTCAC 58.968 50.000 0.00 0.00 0.00 3.18
3836 4476 1.774110 TTCCTTTTGCAGCCTGTTCA 58.226 45.000 0.00 0.00 0.00 3.18
3837 4477 2.473816 GTTTCCTTTTGCAGCCTGTTC 58.526 47.619 0.00 0.00 0.00 3.18
3838 4478 1.138859 GGTTTCCTTTTGCAGCCTGTT 59.861 47.619 0.00 0.00 0.00 3.16
3839 4479 0.752658 GGTTTCCTTTTGCAGCCTGT 59.247 50.000 0.00 0.00 0.00 4.00
3840 4480 0.752054 TGGTTTCCTTTTGCAGCCTG 59.248 50.000 0.00 0.00 0.00 4.85
3841 4481 1.043022 CTGGTTTCCTTTTGCAGCCT 58.957 50.000 0.00 0.00 0.00 4.58
3842 4482 0.033920 CCTGGTTTCCTTTTGCAGCC 59.966 55.000 0.00 0.00 0.00 4.85
3843 4483 0.601046 GCCTGGTTTCCTTTTGCAGC 60.601 55.000 0.00 0.00 0.00 5.25
3844 4484 0.752054 TGCCTGGTTTCCTTTTGCAG 59.248 50.000 0.00 0.00 0.00 4.41
3845 4485 1.344114 GATGCCTGGTTTCCTTTTGCA 59.656 47.619 0.00 0.00 0.00 4.08
3846 4486 1.620323 AGATGCCTGGTTTCCTTTTGC 59.380 47.619 0.00 0.00 0.00 3.68
3847 4487 3.057033 CAGAGATGCCTGGTTTCCTTTTG 60.057 47.826 0.00 0.00 0.00 2.44
3848 4488 3.160269 CAGAGATGCCTGGTTTCCTTTT 58.840 45.455 0.00 0.00 0.00 2.27
3849 4489 2.108952 ACAGAGATGCCTGGTTTCCTTT 59.891 45.455 0.00 0.00 38.44 3.11
3850 4490 1.707427 ACAGAGATGCCTGGTTTCCTT 59.293 47.619 0.00 0.00 38.44 3.36
3851 4491 1.280421 GACAGAGATGCCTGGTTTCCT 59.720 52.381 0.00 0.00 38.44 3.36
3852 4492 1.003580 TGACAGAGATGCCTGGTTTCC 59.996 52.381 0.00 0.00 38.44 3.13
3853 4493 2.479566 TGACAGAGATGCCTGGTTTC 57.520 50.000 0.00 0.00 38.44 2.78
3854 4494 2.957402 TTGACAGAGATGCCTGGTTT 57.043 45.000 0.00 0.00 38.44 3.27
3855 4495 2.957402 TTTGACAGAGATGCCTGGTT 57.043 45.000 0.00 0.00 38.44 3.67
3856 4496 2.957402 TTTTGACAGAGATGCCTGGT 57.043 45.000 0.00 0.00 38.44 4.00
3897 4537 9.512588 CATGTCAGAAGGGCTTTATTATCTTAT 57.487 33.333 0.00 0.00 0.00 1.73
3898 4538 8.713971 TCATGTCAGAAGGGCTTTATTATCTTA 58.286 33.333 0.00 0.00 0.00 2.10
3899 4539 7.577303 TCATGTCAGAAGGGCTTTATTATCTT 58.423 34.615 0.00 0.00 0.00 2.40
3900 4540 7.141758 TCATGTCAGAAGGGCTTTATTATCT 57.858 36.000 0.00 0.00 0.00 1.98
3901 4541 7.807977 TTCATGTCAGAAGGGCTTTATTATC 57.192 36.000 0.00 0.00 0.00 1.75
3902 4542 7.836183 ACTTTCATGTCAGAAGGGCTTTATTAT 59.164 33.333 0.00 0.00 0.00 1.28
3903 4543 7.175104 ACTTTCATGTCAGAAGGGCTTTATTA 58.825 34.615 0.00 0.00 0.00 0.98
3904 4544 6.012745 ACTTTCATGTCAGAAGGGCTTTATT 58.987 36.000 0.00 0.00 0.00 1.40
3905 4545 5.574188 ACTTTCATGTCAGAAGGGCTTTAT 58.426 37.500 0.00 0.00 0.00 1.40
3906 4546 4.985538 ACTTTCATGTCAGAAGGGCTTTA 58.014 39.130 0.00 0.00 0.00 1.85
3907 4547 3.837355 ACTTTCATGTCAGAAGGGCTTT 58.163 40.909 0.00 0.00 0.00 3.51
3908 4548 3.515602 ACTTTCATGTCAGAAGGGCTT 57.484 42.857 0.00 0.00 0.00 4.35
3909 4549 3.152341 CAACTTTCATGTCAGAAGGGCT 58.848 45.455 0.00 0.00 0.00 5.19
3910 4550 2.352127 GCAACTTTCATGTCAGAAGGGC 60.352 50.000 0.00 0.00 0.00 5.19
3911 4551 2.229784 GGCAACTTTCATGTCAGAAGGG 59.770 50.000 0.00 0.00 0.00 3.95
3912 4552 2.886523 TGGCAACTTTCATGTCAGAAGG 59.113 45.455 0.00 0.00 37.61 3.46
3913 4553 3.567164 AGTGGCAACTTTCATGTCAGAAG 59.433 43.478 0.00 0.00 32.15 2.85
3914 4554 3.554934 AGTGGCAACTTTCATGTCAGAA 58.445 40.909 0.00 0.00 32.15 3.02
3915 4555 3.213206 AGTGGCAACTTTCATGTCAGA 57.787 42.857 0.00 0.00 32.15 3.27
3916 4556 4.516698 AGTTAGTGGCAACTTTCATGTCAG 59.483 41.667 0.00 0.00 35.16 3.51
3917 4557 4.460263 AGTTAGTGGCAACTTTCATGTCA 58.540 39.130 0.00 0.00 35.16 3.58
3918 4558 6.554334 TTAGTTAGTGGCAACTTTCATGTC 57.446 37.500 0.00 0.00 39.45 3.06
3919 4559 6.151144 GGATTAGTTAGTGGCAACTTTCATGT 59.849 38.462 0.00 0.00 39.45 3.21
3920 4560 6.375455 AGGATTAGTTAGTGGCAACTTTCATG 59.625 38.462 0.00 0.00 39.45 3.07
3921 4561 6.485171 AGGATTAGTTAGTGGCAACTTTCAT 58.515 36.000 0.00 0.00 39.45 2.57
3922 4562 5.876357 AGGATTAGTTAGTGGCAACTTTCA 58.124 37.500 0.00 0.00 39.45 2.69
3923 4563 6.819397 AAGGATTAGTTAGTGGCAACTTTC 57.181 37.500 0.00 0.00 39.45 2.62
3924 4564 7.255836 GGAAAAGGATTAGTTAGTGGCAACTTT 60.256 37.037 0.00 0.00 39.45 2.66
3925 4565 6.208797 GGAAAAGGATTAGTTAGTGGCAACTT 59.791 38.462 0.00 0.00 39.45 2.66
3926 4566 5.710567 GGAAAAGGATTAGTTAGTGGCAACT 59.289 40.000 0.00 0.00 41.56 3.16
3927 4567 5.391629 CGGAAAAGGATTAGTTAGTGGCAAC 60.392 44.000 0.00 0.00 0.00 4.17
3928 4568 4.698304 CGGAAAAGGATTAGTTAGTGGCAA 59.302 41.667 0.00 0.00 0.00 4.52
3929 4569 4.020039 TCGGAAAAGGATTAGTTAGTGGCA 60.020 41.667 0.00 0.00 0.00 4.92
3930 4570 4.510571 TCGGAAAAGGATTAGTTAGTGGC 58.489 43.478 0.00 0.00 0.00 5.01
3931 4571 4.571176 GCTCGGAAAAGGATTAGTTAGTGG 59.429 45.833 0.00 0.00 0.00 4.00
3932 4572 4.571176 GGCTCGGAAAAGGATTAGTTAGTG 59.429 45.833 0.00 0.00 0.00 2.74
3933 4573 4.470304 AGGCTCGGAAAAGGATTAGTTAGT 59.530 41.667 0.00 0.00 0.00 2.24
3934 4574 4.811557 CAGGCTCGGAAAAGGATTAGTTAG 59.188 45.833 0.00 0.00 0.00 2.34
3935 4575 4.766375 CAGGCTCGGAAAAGGATTAGTTA 58.234 43.478 0.00 0.00 0.00 2.24
3936 4576 3.610911 CAGGCTCGGAAAAGGATTAGTT 58.389 45.455 0.00 0.00 0.00 2.24
3937 4577 2.681097 GCAGGCTCGGAAAAGGATTAGT 60.681 50.000 0.00 0.00 0.00 2.24
3938 4578 1.943340 GCAGGCTCGGAAAAGGATTAG 59.057 52.381 0.00 0.00 0.00 1.73
3939 4579 1.280710 TGCAGGCTCGGAAAAGGATTA 59.719 47.619 0.00 0.00 0.00 1.75
3940 4580 0.038166 TGCAGGCTCGGAAAAGGATT 59.962 50.000 0.00 0.00 0.00 3.01
3941 4581 0.038166 TTGCAGGCTCGGAAAAGGAT 59.962 50.000 0.00 0.00 0.00 3.24
3942 4582 0.889186 GTTGCAGGCTCGGAAAAGGA 60.889 55.000 0.00 0.00 0.00 3.36
3943 4583 1.172180 TGTTGCAGGCTCGGAAAAGG 61.172 55.000 0.00 0.00 0.00 3.11
3944 4584 0.040067 GTGTTGCAGGCTCGGAAAAG 60.040 55.000 0.00 0.00 0.00 2.27
3945 4585 0.749818 TGTGTTGCAGGCTCGGAAAA 60.750 50.000 0.00 0.00 0.00 2.29
3946 4586 0.749818 TTGTGTTGCAGGCTCGGAAA 60.750 50.000 0.00 0.00 0.00 3.13
3947 4587 0.537143 ATTGTGTTGCAGGCTCGGAA 60.537 50.000 0.00 0.00 0.00 4.30
3948 4588 1.073025 ATTGTGTTGCAGGCTCGGA 59.927 52.632 0.00 0.00 0.00 4.55
3949 4589 1.210931 CATTGTGTTGCAGGCTCGG 59.789 57.895 0.00 0.00 0.00 4.63
3950 4590 0.592637 TTCATTGTGTTGCAGGCTCG 59.407 50.000 0.00 0.00 0.00 5.03
3951 4591 3.248266 GAATTCATTGTGTTGCAGGCTC 58.752 45.455 0.00 0.00 0.00 4.70
3952 4592 2.629137 TGAATTCATTGTGTTGCAGGCT 59.371 40.909 3.38 0.00 0.00 4.58
3953 4593 2.733026 GTGAATTCATTGTGTTGCAGGC 59.267 45.455 12.12 0.00 0.00 4.85
3954 4594 3.979948 TGTGAATTCATTGTGTTGCAGG 58.020 40.909 12.12 0.00 0.00 4.85
3955 4595 3.985279 CCTGTGAATTCATTGTGTTGCAG 59.015 43.478 12.12 10.87 0.00 4.41
3956 4596 3.384146 ACCTGTGAATTCATTGTGTTGCA 59.616 39.130 12.12 1.26 0.00 4.08
3957 4597 3.737266 CACCTGTGAATTCATTGTGTTGC 59.263 43.478 12.12 0.00 0.00 4.17
3958 4598 3.737266 GCACCTGTGAATTCATTGTGTTG 59.263 43.478 23.92 14.18 0.00 3.33
3959 4599 3.638160 AGCACCTGTGAATTCATTGTGTT 59.362 39.130 23.92 19.34 0.00 3.32
3960 4600 3.225104 AGCACCTGTGAATTCATTGTGT 58.775 40.909 23.92 13.44 0.00 3.72
3961 4601 3.928727 AGCACCTGTGAATTCATTGTG 57.071 42.857 21.28 21.28 0.00 3.33
3962 4602 4.910195 TCTAGCACCTGTGAATTCATTGT 58.090 39.130 12.12 6.54 0.00 2.71
3963 4603 4.201891 GCTCTAGCACCTGTGAATTCATTG 60.202 45.833 12.12 7.48 41.59 2.82
3964 4604 3.944015 GCTCTAGCACCTGTGAATTCATT 59.056 43.478 12.12 0.00 41.59 2.57
3965 4605 3.199508 AGCTCTAGCACCTGTGAATTCAT 59.800 43.478 12.12 0.00 45.16 2.57
3966 4606 2.568956 AGCTCTAGCACCTGTGAATTCA 59.431 45.455 3.38 3.38 45.16 2.57
3967 4607 3.118811 AGAGCTCTAGCACCTGTGAATTC 60.119 47.826 16.50 0.00 45.16 2.17
3968 4608 2.836981 AGAGCTCTAGCACCTGTGAATT 59.163 45.455 16.50 0.00 45.16 2.17
3969 4609 2.465813 AGAGCTCTAGCACCTGTGAAT 58.534 47.619 16.50 0.00 45.16 2.57
3970 4610 1.930251 AGAGCTCTAGCACCTGTGAA 58.070 50.000 16.50 0.00 45.16 3.18
3971 4611 1.547820 CAAGAGCTCTAGCACCTGTGA 59.452 52.381 18.59 0.00 45.16 3.58
3972 4612 1.547820 TCAAGAGCTCTAGCACCTGTG 59.452 52.381 18.59 9.09 45.16 3.66
3973 4613 1.930251 TCAAGAGCTCTAGCACCTGT 58.070 50.000 18.59 0.00 45.16 4.00
3974 4614 3.118847 TCATTCAAGAGCTCTAGCACCTG 60.119 47.826 18.59 10.67 45.16 4.00
3975 4615 3.102972 TCATTCAAGAGCTCTAGCACCT 58.897 45.455 18.59 0.00 45.16 4.00
3976 4616 3.533606 TCATTCAAGAGCTCTAGCACC 57.466 47.619 18.59 0.00 45.16 5.01
3977 4617 8.087750 AGTATATTCATTCAAGAGCTCTAGCAC 58.912 37.037 18.59 0.71 45.16 4.40
3978 4618 8.187913 AGTATATTCATTCAAGAGCTCTAGCA 57.812 34.615 18.59 3.72 45.16 3.49
3979 4619 7.759433 GGAGTATATTCATTCAAGAGCTCTAGC 59.241 40.741 18.59 0.00 42.49 3.42
3980 4620 8.250332 GGGAGTATATTCATTCAAGAGCTCTAG 58.750 40.741 18.59 5.24 0.00 2.43
3981 4621 7.952930 AGGGAGTATATTCATTCAAGAGCTCTA 59.047 37.037 18.59 0.95 0.00 2.43
3982 4622 6.786959 AGGGAGTATATTCATTCAAGAGCTCT 59.213 38.462 11.45 11.45 0.00 4.09
3983 4623 7.003402 AGGGAGTATATTCATTCAAGAGCTC 57.997 40.000 5.27 5.27 0.00 4.09
3984 4624 6.013812 GGAGGGAGTATATTCATTCAAGAGCT 60.014 42.308 0.00 0.00 0.00 4.09
3985 4625 6.169800 GGAGGGAGTATATTCATTCAAGAGC 58.830 44.000 0.00 0.00 0.00 4.09
3986 4626 6.015010 ACGGAGGGAGTATATTCATTCAAGAG 60.015 42.308 0.00 0.00 0.00 2.85
3987 4627 5.839063 ACGGAGGGAGTATATTCATTCAAGA 59.161 40.000 0.00 0.00 0.00 3.02
3988 4628 6.102897 ACGGAGGGAGTATATTCATTCAAG 57.897 41.667 0.00 0.00 0.00 3.02
3989 4629 7.606135 TTACGGAGGGAGTATATTCATTCAA 57.394 36.000 0.00 0.00 0.00 2.69
3990 4630 7.256190 CCTTTACGGAGGGAGTATATTCATTCA 60.256 40.741 0.00 0.00 32.94 2.57
3991 4631 7.097834 CCTTTACGGAGGGAGTATATTCATTC 58.902 42.308 0.00 0.00 32.94 2.67
3992 4632 7.005709 CCTTTACGGAGGGAGTATATTCATT 57.994 40.000 0.00 0.00 32.94 2.57
3993 4633 6.607004 CCTTTACGGAGGGAGTATATTCAT 57.393 41.667 0.00 0.00 32.94 2.57
4007 4647 7.094677 GCAAATAAAACTTACTCCCTTTACGGA 60.095 37.037 0.00 0.00 33.16 4.69
4008 4648 7.025365 GCAAATAAAACTTACTCCCTTTACGG 58.975 38.462 0.00 0.00 0.00 4.02
4009 4649 7.749126 CAGCAAATAAAACTTACTCCCTTTACG 59.251 37.037 0.00 0.00 0.00 3.18
4010 4650 7.541091 GCAGCAAATAAAACTTACTCCCTTTAC 59.459 37.037 0.00 0.00 0.00 2.01
4011 4651 7.309560 GGCAGCAAATAAAACTTACTCCCTTTA 60.310 37.037 0.00 0.00 0.00 1.85
4012 4652 6.455647 GCAGCAAATAAAACTTACTCCCTTT 58.544 36.000 0.00 0.00 0.00 3.11
4013 4653 5.047306 GGCAGCAAATAAAACTTACTCCCTT 60.047 40.000 0.00 0.00 0.00 3.95
4014 4654 4.462834 GGCAGCAAATAAAACTTACTCCCT 59.537 41.667 0.00 0.00 0.00 4.20
4015 4655 4.462834 AGGCAGCAAATAAAACTTACTCCC 59.537 41.667 0.00 0.00 0.00 4.30
4016 4656 5.402398 CAGGCAGCAAATAAAACTTACTCC 58.598 41.667 0.00 0.00 0.00 3.85
4017 4657 4.859245 GCAGGCAGCAAATAAAACTTACTC 59.141 41.667 0.00 0.00 44.79 2.59
4018 4658 4.809673 GCAGGCAGCAAATAAAACTTACT 58.190 39.130 0.00 0.00 44.79 2.24
4032 4672 1.303155 AAGAGTTCCAGCAGGCAGC 60.303 57.895 0.00 0.00 46.19 5.25
4033 4673 1.584380 GCAAGAGTTCCAGCAGGCAG 61.584 60.000 0.00 0.00 33.74 4.85
4034 4674 1.601759 GCAAGAGTTCCAGCAGGCA 60.602 57.895 0.00 0.00 33.74 4.75
4035 4675 1.303155 AGCAAGAGTTCCAGCAGGC 60.303 57.895 0.00 0.00 33.74 4.85
4036 4676 0.035881 TGAGCAAGAGTTCCAGCAGG 59.964 55.000 0.00 0.00 0.00 4.85
4037 4677 1.738350 CATGAGCAAGAGTTCCAGCAG 59.262 52.381 0.00 0.00 0.00 4.24
4038 4678 1.072806 ACATGAGCAAGAGTTCCAGCA 59.927 47.619 0.00 0.00 0.00 4.41
4039 4679 1.818642 ACATGAGCAAGAGTTCCAGC 58.181 50.000 0.00 0.00 0.00 4.85
4040 4680 3.369147 CGTTACATGAGCAAGAGTTCCAG 59.631 47.826 0.00 0.00 0.00 3.86
4041 4681 3.006430 TCGTTACATGAGCAAGAGTTCCA 59.994 43.478 0.00 0.00 0.00 3.53
4042 4682 3.585862 TCGTTACATGAGCAAGAGTTCC 58.414 45.455 0.00 0.00 0.00 3.62
4043 4683 4.923871 TCTTCGTTACATGAGCAAGAGTTC 59.076 41.667 0.00 0.00 0.00 3.01
4044 4684 4.883083 TCTTCGTTACATGAGCAAGAGTT 58.117 39.130 0.00 0.00 0.00 3.01
4045 4685 4.521130 TCTTCGTTACATGAGCAAGAGT 57.479 40.909 0.00 0.00 0.00 3.24
4046 4686 5.845985 TTTCTTCGTTACATGAGCAAGAG 57.154 39.130 0.00 0.00 0.00 2.85
4047 4687 5.931724 TGATTTCTTCGTTACATGAGCAAGA 59.068 36.000 0.00 0.00 0.00 3.02
4048 4688 6.169419 TGATTTCTTCGTTACATGAGCAAG 57.831 37.500 0.00 0.00 0.00 4.01
4049 4689 5.122239 CCTGATTTCTTCGTTACATGAGCAA 59.878 40.000 0.00 0.00 0.00 3.91
4050 4690 4.631377 CCTGATTTCTTCGTTACATGAGCA 59.369 41.667 0.00 0.00 0.00 4.26
4051 4691 4.494855 GCCTGATTTCTTCGTTACATGAGC 60.495 45.833 0.00 0.00 0.00 4.26
4052 4692 4.631377 TGCCTGATTTCTTCGTTACATGAG 59.369 41.667 0.00 0.00 0.00 2.90
4053 4693 4.574892 TGCCTGATTTCTTCGTTACATGA 58.425 39.130 0.00 0.00 0.00 3.07
4054 4694 4.201851 CCTGCCTGATTTCTTCGTTACATG 60.202 45.833 0.00 0.00 0.00 3.21
4055 4695 3.941483 CCTGCCTGATTTCTTCGTTACAT 59.059 43.478 0.00 0.00 0.00 2.29
4056 4696 3.334691 CCTGCCTGATTTCTTCGTTACA 58.665 45.455 0.00 0.00 0.00 2.41
4057 4697 2.096013 GCCTGCCTGATTTCTTCGTTAC 59.904 50.000 0.00 0.00 0.00 2.50
4058 4698 2.027192 AGCCTGCCTGATTTCTTCGTTA 60.027 45.455 0.00 0.00 0.00 3.18
4059 4699 1.168714 GCCTGCCTGATTTCTTCGTT 58.831 50.000 0.00 0.00 0.00 3.85
4060 4700 0.326264 AGCCTGCCTGATTTCTTCGT 59.674 50.000 0.00 0.00 0.00 3.85
4061 4701 0.731417 CAGCCTGCCTGATTTCTTCG 59.269 55.000 0.00 0.00 44.64 3.79
4062 4702 2.119801 TCAGCCTGCCTGATTTCTTC 57.880 50.000 0.00 0.00 45.44 2.87
4070 4710 2.996249 TTCTTCTATCAGCCTGCCTG 57.004 50.000 0.00 0.00 43.17 4.85
4071 4711 4.516652 ATTTTCTTCTATCAGCCTGCCT 57.483 40.909 0.00 0.00 0.00 4.75
4072 4712 6.890979 ATAATTTTCTTCTATCAGCCTGCC 57.109 37.500 0.00 0.00 0.00 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.