Multiple sequence alignment - TraesCS3B01G134200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G134200 chr3B 100.000 2687 0 0 1 2687 116152507 116149821 0.000000e+00 4963
1 TraesCS3B01G134200 chr3D 93.032 1263 58 16 669 1905 70716737 70715479 0.000000e+00 1818
2 TraesCS3B01G134200 chr3D 86.353 447 26 12 1946 2358 70715479 70715034 3.150000e-124 455
3 TraesCS3B01G134200 chr3D 91.860 86 5 2 2537 2621 70715479 70715395 4.700000e-23 119
4 TraesCS3B01G134200 chr3A 90.328 1158 44 18 768 1905 82396631 82395522 0.000000e+00 1456
5 TraesCS3B01G134200 chr3A 83.032 442 28 11 1946 2358 82395522 82395099 9.150000e-95 357
6 TraesCS3B01G134200 chr3A 91.860 86 5 2 2537 2621 82395522 82395438 4.700000e-23 119
7 TraesCS3B01G134200 chr4B 94.540 641 33 2 1 639 641155667 641155027 0.000000e+00 989
8 TraesCS3B01G134200 chr4B 92.627 651 35 4 1 639 47496682 47497331 0.000000e+00 924
9 TraesCS3B01G134200 chr6B 92.462 650 36 4 1 638 190374126 190373478 0.000000e+00 917
10 TraesCS3B01G134200 chr5B 92.691 643 33 8 1 631 378524849 378524209 0.000000e+00 915
11 TraesCS3B01G134200 chr7B 92.166 651 38 4 1 639 116477552 116478201 0.000000e+00 907
12 TraesCS3B01G134200 chr7B 90.491 652 47 13 1 639 454236224 454236873 0.000000e+00 846
13 TraesCS3B01G134200 chr4A 91.264 641 51 5 1 639 36151728 36152365 0.000000e+00 869
14 TraesCS3B01G134200 chr5A 90.549 656 46 10 1 642 211614286 211614939 0.000000e+00 854
15 TraesCS3B01G134200 chr6A 90.640 641 57 3 2 639 78006173 78006813 0.000000e+00 848


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G134200 chr3B 116149821 116152507 2686 True 4963.000000 4963 100.000000 1 2687 1 chr3B.!!$R1 2686
1 TraesCS3B01G134200 chr3D 70715034 70716737 1703 True 797.333333 1818 90.415000 669 2621 3 chr3D.!!$R1 1952
2 TraesCS3B01G134200 chr3A 82395099 82396631 1532 True 644.000000 1456 88.406667 768 2621 3 chr3A.!!$R1 1853
3 TraesCS3B01G134200 chr4B 641155027 641155667 640 True 989.000000 989 94.540000 1 639 1 chr4B.!!$R1 638
4 TraesCS3B01G134200 chr4B 47496682 47497331 649 False 924.000000 924 92.627000 1 639 1 chr4B.!!$F1 638
5 TraesCS3B01G134200 chr6B 190373478 190374126 648 True 917.000000 917 92.462000 1 638 1 chr6B.!!$R1 637
6 TraesCS3B01G134200 chr5B 378524209 378524849 640 True 915.000000 915 92.691000 1 631 1 chr5B.!!$R1 630
7 TraesCS3B01G134200 chr7B 116477552 116478201 649 False 907.000000 907 92.166000 1 639 1 chr7B.!!$F1 638
8 TraesCS3B01G134200 chr7B 454236224 454236873 649 False 846.000000 846 90.491000 1 639 1 chr7B.!!$F2 638
9 TraesCS3B01G134200 chr4A 36151728 36152365 637 False 869.000000 869 91.264000 1 639 1 chr4A.!!$F1 638
10 TraesCS3B01G134200 chr5A 211614286 211614939 653 False 854.000000 854 90.549000 1 642 1 chr5A.!!$F1 641
11 TraesCS3B01G134200 chr6A 78006173 78006813 640 False 848.000000 848 90.640000 2 639 1 chr6A.!!$F1 637

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
931 953 0.034477 ATCCGTCCATCCCCAACAAC 60.034 55.0 0.0 0.0 0.0 3.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2463 2541 0.179045 CGCCCTACAGCAGCCTAAAT 60.179 55.0 0.0 0.0 0.0 1.4 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
273 274 4.999939 CGGGTGCGCAAACAAGGC 63.000 66.667 14.00 0.00 0.00 4.35
399 413 4.408821 GTGGAGTGGATGCGGCCA 62.409 66.667 2.24 0.00 35.02 5.36
403 417 3.005539 AGTGGATGCGGCCAGAGT 61.006 61.111 2.24 0.00 38.95 3.24
541 555 3.969250 GAACTTGGGCCGCGGATGA 62.969 63.158 33.48 8.02 0.00 2.92
544 558 3.976701 CTTGGGCCGCGGATGAGTT 62.977 63.158 33.48 0.00 0.00 3.01
570 584 1.202200 CGGACACAAAGCGGACAAAAA 60.202 47.619 0.00 0.00 0.00 1.94
585 599 2.077821 AAAAATCCGTTTGCGCCCGT 62.078 50.000 4.18 0.00 36.67 5.28
607 621 1.597027 CTGGGCCGTCTCGTTTGTT 60.597 57.895 0.00 0.00 0.00 2.83
609 623 1.301479 GGGCCGTCTCGTTTGTTCT 60.301 57.895 0.00 0.00 0.00 3.01
616 630 4.494526 GCCGTCTCGTTTGTTCTTTTTACA 60.495 41.667 0.00 0.00 0.00 2.41
632 646 4.939368 CACCAAACGGACGGGGCA 62.939 66.667 0.00 0.00 0.00 5.36
633 647 4.636435 ACCAAACGGACGGGGCAG 62.636 66.667 0.00 0.00 0.00 4.85
634 648 4.323477 CCAAACGGACGGGGCAGA 62.323 66.667 0.00 0.00 0.00 4.26
635 649 3.047877 CAAACGGACGGGGCAGAC 61.048 66.667 0.00 0.00 0.00 3.51
636 650 3.552384 AAACGGACGGGGCAGACA 61.552 61.111 0.00 0.00 0.00 3.41
637 651 3.530910 AAACGGACGGGGCAGACAG 62.531 63.158 0.00 0.00 0.00 3.51
649 663 2.203640 AGACAGGCGGACAGGACA 60.204 61.111 0.00 0.00 0.00 4.02
651 665 3.302347 GACAGGCGGACAGGACAGG 62.302 68.421 0.00 0.00 0.00 4.00
652 666 4.087892 CAGGCGGACAGGACAGGG 62.088 72.222 0.00 0.00 0.00 4.45
653 667 4.640690 AGGCGGACAGGACAGGGT 62.641 66.667 0.00 0.00 0.00 4.34
654 668 2.682494 GGCGGACAGGACAGGGTA 60.682 66.667 0.00 0.00 0.00 3.69
655 669 2.722201 GGCGGACAGGACAGGGTAG 61.722 68.421 0.00 0.00 0.00 3.18
656 670 1.982938 GCGGACAGGACAGGGTAGT 60.983 63.158 0.00 0.00 0.00 2.73
657 671 1.542187 GCGGACAGGACAGGGTAGTT 61.542 60.000 0.00 0.00 0.00 2.24
658 672 0.246635 CGGACAGGACAGGGTAGTTG 59.753 60.000 0.00 0.00 0.00 3.16
659 673 0.613777 GGACAGGACAGGGTAGTTGG 59.386 60.000 0.00 0.00 0.00 3.77
660 674 0.036294 GACAGGACAGGGTAGTTGGC 60.036 60.000 0.00 0.00 0.00 4.52
661 675 0.766674 ACAGGACAGGGTAGTTGGCA 60.767 55.000 0.00 0.00 0.00 4.92
662 676 0.620556 CAGGACAGGGTAGTTGGCAT 59.379 55.000 0.00 0.00 0.00 4.40
663 677 0.620556 AGGACAGGGTAGTTGGCATG 59.379 55.000 0.00 0.00 0.00 4.06
664 678 0.618458 GGACAGGGTAGTTGGCATGA 59.382 55.000 0.00 0.00 0.00 3.07
665 679 1.407437 GGACAGGGTAGTTGGCATGAG 60.407 57.143 0.00 0.00 0.00 2.90
666 680 0.620556 ACAGGGTAGTTGGCATGAGG 59.379 55.000 0.00 0.00 0.00 3.86
667 681 0.749454 CAGGGTAGTTGGCATGAGGC 60.749 60.000 0.00 0.00 43.74 4.70
677 691 3.490759 CATGAGGCGGCGACACAC 61.491 66.667 16.70 6.32 0.00 3.82
685 699 2.505498 CGGCGACACACGAGCATAC 61.505 63.158 0.00 0.00 45.77 2.39
686 700 2.165301 GGCGACACACGAGCATACC 61.165 63.158 0.00 0.00 45.77 2.73
687 701 1.445410 GCGACACACGAGCATACCA 60.445 57.895 0.00 0.00 45.77 3.25
688 702 1.683790 GCGACACACGAGCATACCAC 61.684 60.000 0.00 0.00 45.77 4.16
706 720 2.944557 CATCACCGTCGACGCTCG 60.945 66.667 31.73 20.51 42.10 5.03
727 741 4.388499 GGCCCGAACGAGAGCCAA 62.388 66.667 14.36 0.00 45.07 4.52
742 756 1.851065 GCCAATGGCCCATGGGTTTT 61.851 55.000 31.58 19.01 44.06 2.43
746 760 2.047370 GGCCCATGGGTTTTTGCG 60.047 61.111 31.58 4.22 37.65 4.85
750 764 0.390860 CCCATGGGTTTTTGCGTGAA 59.609 50.000 23.93 0.00 0.00 3.18
753 767 2.939103 CCATGGGTTTTTGCGTGAAAAA 59.061 40.909 2.85 3.87 40.52 1.94
778 795 2.489722 GAGGAAACAGATGTTGGGCTTC 59.510 50.000 0.00 0.00 38.44 3.86
805 822 2.992817 AAACCGGCCCACTGCATCAA 62.993 55.000 0.00 0.00 43.89 2.57
808 825 3.443045 GGCCCACTGCATCAACCG 61.443 66.667 0.00 0.00 43.89 4.44
914 936 0.176449 GCCCAAATCCAAGCACCATC 59.824 55.000 0.00 0.00 0.00 3.51
931 953 0.034477 ATCCGTCCATCCCCAACAAC 60.034 55.000 0.00 0.00 0.00 3.32
946 968 3.581755 CAACAACATCTGCCAAATCCAG 58.418 45.455 0.00 0.00 0.00 3.86
947 969 3.159213 ACAACATCTGCCAAATCCAGA 57.841 42.857 0.00 0.00 42.91 3.86
1019 1043 0.613012 ATGGAGCAAGTTGAAGGGGC 60.613 55.000 7.16 0.00 0.00 5.80
1207 1237 1.531840 GAGGAGGAGGCGGATGCTA 60.532 63.158 0.00 0.00 42.25 3.49
1398 1434 2.510238 GAGGCGTCGCTGCTCATT 60.510 61.111 18.11 0.00 34.52 2.57
1605 1641 2.507944 GGATCTGATGGTGCCGCT 59.492 61.111 0.00 0.00 0.00 5.52
1691 1727 3.432378 TCCAGAAGGTCACTTAGAGGTC 58.568 50.000 0.00 0.00 36.97 3.85
1745 1783 7.461182 TCCAAGTGGTTAAAATGTATTCCTG 57.539 36.000 0.00 0.00 36.34 3.86
1853 1891 3.682696 GCAAGGATCTGATATGCCATCA 58.317 45.455 9.98 0.00 0.00 3.07
1905 1949 6.889301 ATTCAGCAGTCATTTTTCTTGAGA 57.111 33.333 0.00 0.00 0.00 3.27
1906 1950 5.679734 TCAGCAGTCATTTTTCTTGAGAC 57.320 39.130 0.00 0.00 0.00 3.36
1907 1951 5.125356 TCAGCAGTCATTTTTCTTGAGACA 58.875 37.500 0.00 0.00 0.00 3.41
1908 1952 5.589855 TCAGCAGTCATTTTTCTTGAGACAA 59.410 36.000 0.00 0.00 0.00 3.18
1909 1953 6.263842 TCAGCAGTCATTTTTCTTGAGACAAT 59.736 34.615 0.00 0.00 0.00 2.71
1910 1954 6.921857 CAGCAGTCATTTTTCTTGAGACAATT 59.078 34.615 0.00 0.00 0.00 2.32
1911 1955 6.921857 AGCAGTCATTTTTCTTGAGACAATTG 59.078 34.615 3.24 3.24 0.00 2.32
1912 1956 6.145048 GCAGTCATTTTTCTTGAGACAATTGG 59.855 38.462 10.83 0.00 0.00 3.16
1913 1957 6.643770 CAGTCATTTTTCTTGAGACAATTGGG 59.356 38.462 10.83 0.00 0.00 4.12
1914 1958 5.406477 GTCATTTTTCTTGAGACAATTGGGC 59.594 40.000 10.83 1.25 0.00 5.36
1915 1959 5.070180 TCATTTTTCTTGAGACAATTGGGCA 59.930 36.000 10.83 1.75 0.00 5.36
1916 1960 4.589216 TTTTCTTGAGACAATTGGGCAG 57.411 40.909 10.83 0.00 0.00 4.85
1917 1961 2.957402 TCTTGAGACAATTGGGCAGT 57.043 45.000 10.83 0.00 0.00 4.40
1918 1962 2.783135 TCTTGAGACAATTGGGCAGTC 58.217 47.619 10.83 0.00 0.00 3.51
1919 1963 2.106338 TCTTGAGACAATTGGGCAGTCA 59.894 45.455 10.83 2.23 34.80 3.41
1920 1964 2.885135 TGAGACAATTGGGCAGTCAT 57.115 45.000 10.83 0.00 34.80 3.06
1921 1965 3.159213 TGAGACAATTGGGCAGTCATT 57.841 42.857 10.83 0.00 34.80 2.57
1922 1966 3.499338 TGAGACAATTGGGCAGTCATTT 58.501 40.909 10.83 0.00 34.80 2.32
1923 1967 4.661222 TGAGACAATTGGGCAGTCATTTA 58.339 39.130 10.83 0.00 34.80 1.40
1924 1968 4.701651 TGAGACAATTGGGCAGTCATTTAG 59.298 41.667 10.83 0.00 34.80 1.85
1925 1969 3.445096 AGACAATTGGGCAGTCATTTAGC 59.555 43.478 10.83 0.00 34.80 3.09
1926 1970 3.434309 ACAATTGGGCAGTCATTTAGCT 58.566 40.909 10.83 0.00 0.00 3.32
1927 1971 3.445096 ACAATTGGGCAGTCATTTAGCTC 59.555 43.478 10.83 0.00 0.00 4.09
1928 1972 2.877097 TTGGGCAGTCATTTAGCTCA 57.123 45.000 0.00 0.00 36.89 4.26
1929 1973 3.370840 TTGGGCAGTCATTTAGCTCAT 57.629 42.857 0.00 0.00 38.75 2.90
1930 1974 2.646930 TGGGCAGTCATTTAGCTCATG 58.353 47.619 0.00 0.00 33.02 3.07
1931 1975 2.025981 TGGGCAGTCATTTAGCTCATGT 60.026 45.455 0.00 0.00 33.02 3.21
1932 1976 2.615912 GGGCAGTCATTTAGCTCATGTC 59.384 50.000 0.00 0.00 0.00 3.06
1933 1977 3.539604 GGCAGTCATTTAGCTCATGTCT 58.460 45.455 0.00 0.00 0.00 3.41
1934 1978 4.443457 GGGCAGTCATTTAGCTCATGTCTA 60.443 45.833 0.00 0.00 0.00 2.59
1935 1979 4.749099 GGCAGTCATTTAGCTCATGTCTAG 59.251 45.833 0.00 0.00 0.00 2.43
1936 1980 5.355596 GCAGTCATTTAGCTCATGTCTAGT 58.644 41.667 0.00 0.00 0.00 2.57
1937 1981 5.233902 GCAGTCATTTAGCTCATGTCTAGTG 59.766 44.000 0.00 0.00 0.00 2.74
1938 1982 6.567959 CAGTCATTTAGCTCATGTCTAGTGA 58.432 40.000 0.00 2.67 0.00 3.41
1939 1983 6.475076 CAGTCATTTAGCTCATGTCTAGTGAC 59.525 42.308 20.82 20.82 43.20 3.67
1940 1984 6.379703 AGTCATTTAGCTCATGTCTAGTGACT 59.620 38.462 22.75 22.75 43.29 3.41
1941 1985 6.695278 GTCATTTAGCTCATGTCTAGTGACTC 59.305 42.308 20.94 9.53 43.29 3.36
1942 1986 6.378280 TCATTTAGCTCATGTCTAGTGACTCA 59.622 38.462 0.00 0.00 43.29 3.41
1943 1987 6.782082 TTTAGCTCATGTCTAGTGACTCAT 57.218 37.500 0.00 0.00 43.29 2.90
1944 1988 4.916983 AGCTCATGTCTAGTGACTCATC 57.083 45.455 0.00 0.00 43.29 2.92
1945 1989 3.314913 AGCTCATGTCTAGTGACTCATCG 59.685 47.826 0.00 0.00 43.29 3.84
1951 1995 5.175090 TGTCTAGTGACTCATCGCATTAG 57.825 43.478 0.00 0.00 43.29 1.73
1952 1996 4.640647 TGTCTAGTGACTCATCGCATTAGT 59.359 41.667 0.00 0.00 43.29 2.24
1974 2018 4.986054 TTTTAGGGCCTGTCTAGAACAA 57.014 40.909 18.53 0.00 37.45 2.83
1976 2020 5.514500 TTTAGGGCCTGTCTAGAACAAAT 57.486 39.130 18.53 0.00 37.45 2.32
1977 2021 3.636153 AGGGCCTGTCTAGAACAAATC 57.364 47.619 4.50 0.00 37.45 2.17
2016 2063 3.535561 TGCTGCTAAGAATAAGAGTGCC 58.464 45.455 0.00 0.00 0.00 5.01
2023 2070 3.567478 AGAATAAGAGTGCCACCATCC 57.433 47.619 0.00 0.00 0.00 3.51
2027 2074 1.620822 AAGAGTGCCACCATCCAAAC 58.379 50.000 0.00 0.00 0.00 2.93
2038 2087 5.122082 GCCACCATCCAAACATACAAAATTG 59.878 40.000 0.00 0.00 0.00 2.32
2062 2111 9.944376 TTGAGACTGCTACTAAATTCATACTTT 57.056 29.630 0.00 0.00 0.00 2.66
2067 2116 7.883311 ACTGCTACTAAATTCATACTTTGTGGT 59.117 33.333 0.00 0.00 0.00 4.16
2134 2201 5.036117 ACAGACCTGCTAACAAGAGAAAA 57.964 39.130 0.00 0.00 0.00 2.29
2155 2222 3.744660 ACTGAACAGGAAATGACAGTCC 58.255 45.455 6.76 0.48 41.91 3.85
2164 2231 5.008415 CAGGAAATGACAGTCCATCTATTGC 59.992 44.000 9.93 0.00 36.28 3.56
2170 2237 3.041211 ACAGTCCATCTATTGCTGCCTA 58.959 45.455 0.00 0.00 0.00 3.93
2191 2258 5.122396 CCTATATTTATTGGTCCGCAAGAGC 59.878 44.000 0.00 0.00 43.62 4.09
2215 2282 7.334421 AGCTATGATTTGGTTTATATGTAGCGG 59.666 37.037 0.00 0.00 36.76 5.52
2268 2337 4.530553 TCATAAGAGTGCTCCAACAAGGTA 59.469 41.667 0.00 0.00 39.02 3.08
2270 2339 1.625818 AGAGTGCTCCAACAAGGTAGG 59.374 52.381 0.00 0.00 39.02 3.18
2271 2340 1.348036 GAGTGCTCCAACAAGGTAGGT 59.652 52.381 0.00 0.00 39.02 3.08
2272 2341 2.565834 GAGTGCTCCAACAAGGTAGGTA 59.434 50.000 0.00 0.00 39.02 3.08
2273 2342 2.976882 AGTGCTCCAACAAGGTAGGTAA 59.023 45.455 0.00 0.00 39.02 2.85
2275 2344 3.689649 GTGCTCCAACAAGGTAGGTAATG 59.310 47.826 0.00 0.00 39.02 1.90
2323 2401 3.126000 GGTCTGATGCAAACAAGTAGCTC 59.874 47.826 0.00 0.00 0.00 4.09
2340 2418 0.250295 CTCGTTTCCCTCTTGCCACA 60.250 55.000 0.00 0.00 0.00 4.17
2346 2424 1.302832 CCCTCTTGCCACAGGACAC 60.303 63.158 0.00 0.00 30.32 3.67
2353 2431 2.831770 CCACAGGACACACTGGCT 59.168 61.111 0.00 0.00 42.75 4.75
2354 2432 1.302033 CCACAGGACACACTGGCTC 60.302 63.158 0.00 0.00 42.75 4.70
2357 2435 1.344953 ACAGGACACACTGGCTCCAA 61.345 55.000 0.00 0.00 42.75 3.53
2358 2436 0.604780 CAGGACACACTGGCTCCAAG 60.605 60.000 0.00 0.00 34.84 3.61
2359 2437 1.056700 AGGACACACTGGCTCCAAGT 61.057 55.000 0.00 0.00 0.00 3.16
2360 2438 0.886490 GGACACACTGGCTCCAAGTG 60.886 60.000 15.39 15.39 37.75 3.16
2361 2439 0.886490 GACACACTGGCTCCAAGTGG 60.886 60.000 18.99 11.99 36.78 4.00
2362 2440 1.149174 CACACTGGCTCCAAGTGGT 59.851 57.895 16.87 0.00 37.83 4.16
2363 2441 0.466189 CACACTGGCTCCAAGTGGTT 60.466 55.000 16.87 1.97 37.83 3.67
2364 2442 1.136828 ACACTGGCTCCAAGTGGTTA 58.863 50.000 16.87 0.00 37.83 2.85
2365 2443 1.493022 ACACTGGCTCCAAGTGGTTAA 59.507 47.619 16.87 0.00 37.83 2.01
2366 2444 2.092103 ACACTGGCTCCAAGTGGTTAAA 60.092 45.455 16.87 0.00 37.83 1.52
2367 2445 2.955660 CACTGGCTCCAAGTGGTTAAAA 59.044 45.455 0.00 0.00 36.34 1.52
2368 2446 3.573967 CACTGGCTCCAAGTGGTTAAAAT 59.426 43.478 0.00 0.00 36.34 1.82
2369 2447 3.573967 ACTGGCTCCAAGTGGTTAAAATG 59.426 43.478 0.00 0.00 36.34 2.32
2370 2448 3.571590 TGGCTCCAAGTGGTTAAAATGT 58.428 40.909 0.00 0.00 36.34 2.71
2371 2449 4.730966 TGGCTCCAAGTGGTTAAAATGTA 58.269 39.130 0.00 0.00 36.34 2.29
2372 2450 5.329399 TGGCTCCAAGTGGTTAAAATGTAT 58.671 37.500 0.00 0.00 36.34 2.29
2373 2451 5.777732 TGGCTCCAAGTGGTTAAAATGTATT 59.222 36.000 0.00 0.00 36.34 1.89
2374 2452 6.071616 TGGCTCCAAGTGGTTAAAATGTATTC 60.072 38.462 0.00 0.00 36.34 1.75
2375 2453 6.330278 GCTCCAAGTGGTTAAAATGTATTCC 58.670 40.000 0.00 0.00 36.34 3.01
2376 2454 6.152831 GCTCCAAGTGGTTAAAATGTATTCCT 59.847 38.462 0.00 0.00 36.34 3.36
2377 2455 7.338449 GCTCCAAGTGGTTAAAATGTATTCCTA 59.662 37.037 0.00 0.00 36.34 2.94
2378 2456 9.408648 CTCCAAGTGGTTAAAATGTATTCCTAT 57.591 33.333 0.00 0.00 36.34 2.57
2379 2457 9.403583 TCCAAGTGGTTAAAATGTATTCCTATC 57.596 33.333 0.00 0.00 36.34 2.08
2380 2458 8.630037 CCAAGTGGTTAAAATGTATTCCTATCC 58.370 37.037 0.00 0.00 0.00 2.59
2381 2459 9.408648 CAAGTGGTTAAAATGTATTCCTATCCT 57.591 33.333 0.00 0.00 0.00 3.24
2382 2460 8.980481 AGTGGTTAAAATGTATTCCTATCCTG 57.020 34.615 0.00 0.00 0.00 3.86
2383 2461 7.502561 AGTGGTTAAAATGTATTCCTATCCTGC 59.497 37.037 0.00 0.00 0.00 4.85
2384 2462 6.775629 TGGTTAAAATGTATTCCTATCCTGCC 59.224 38.462 0.00 0.00 0.00 4.85
2385 2463 6.775629 GGTTAAAATGTATTCCTATCCTGCCA 59.224 38.462 0.00 0.00 0.00 4.92
2386 2464 7.451566 GGTTAAAATGTATTCCTATCCTGCCAT 59.548 37.037 0.00 0.00 0.00 4.40
2387 2465 6.906157 AAAATGTATTCCTATCCTGCCATG 57.094 37.500 0.00 0.00 0.00 3.66
2388 2466 5.589367 AATGTATTCCTATCCTGCCATGT 57.411 39.130 0.00 0.00 0.00 3.21
2389 2467 6.702449 AATGTATTCCTATCCTGCCATGTA 57.298 37.500 0.00 0.00 0.00 2.29
2390 2468 6.702449 ATGTATTCCTATCCTGCCATGTAA 57.298 37.500 0.00 0.00 0.00 2.41
2391 2469 6.702449 TGTATTCCTATCCTGCCATGTAAT 57.298 37.500 0.00 0.00 0.00 1.89
2392 2470 6.475504 TGTATTCCTATCCTGCCATGTAATG 58.524 40.000 0.00 0.00 46.21 1.90
2411 2489 8.877864 TGTAATGAAAGTGGAACCTATGAATT 57.122 30.769 0.00 0.00 37.80 2.17
2412 2490 8.739039 TGTAATGAAAGTGGAACCTATGAATTG 58.261 33.333 0.00 0.00 37.80 2.32
2413 2491 5.643379 TGAAAGTGGAACCTATGAATTGC 57.357 39.130 0.00 0.00 37.80 3.56
2414 2492 5.324409 TGAAAGTGGAACCTATGAATTGCT 58.676 37.500 0.00 0.00 37.80 3.91
2415 2493 5.774690 TGAAAGTGGAACCTATGAATTGCTT 59.225 36.000 0.00 0.00 37.80 3.91
2416 2494 6.945435 TGAAAGTGGAACCTATGAATTGCTTA 59.055 34.615 0.00 0.00 37.80 3.09
2417 2495 7.450014 TGAAAGTGGAACCTATGAATTGCTTAA 59.550 33.333 0.00 0.00 37.80 1.85
2418 2496 7.775053 AAGTGGAACCTATGAATTGCTTAAA 57.225 32.000 0.00 0.00 37.80 1.52
2419 2497 7.775053 AGTGGAACCTATGAATTGCTTAAAA 57.225 32.000 0.00 0.00 37.80 1.52
2420 2498 8.189119 AGTGGAACCTATGAATTGCTTAAAAA 57.811 30.769 0.00 0.00 37.80 1.94
2421 2499 8.815912 AGTGGAACCTATGAATTGCTTAAAAAT 58.184 29.630 0.00 0.00 37.80 1.82
2422 2500 9.435688 GTGGAACCTATGAATTGCTTAAAAATT 57.564 29.630 0.00 0.00 0.00 1.82
2423 2501 9.434420 TGGAACCTATGAATTGCTTAAAAATTG 57.566 29.630 1.53 0.00 0.00 2.32
2424 2502 8.390354 GGAACCTATGAATTGCTTAAAAATTGC 58.610 33.333 1.53 0.00 0.00 3.56
2425 2503 7.848223 ACCTATGAATTGCTTAAAAATTGCC 57.152 32.000 1.53 0.00 0.00 4.52
2426 2504 6.823182 ACCTATGAATTGCTTAAAAATTGCCC 59.177 34.615 1.53 0.00 0.00 5.36
2427 2505 6.822676 CCTATGAATTGCTTAAAAATTGCCCA 59.177 34.615 1.53 0.00 0.00 5.36
2428 2506 7.499895 CCTATGAATTGCTTAAAAATTGCCCAT 59.500 33.333 1.53 0.00 0.00 4.00
2429 2507 7.706100 ATGAATTGCTTAAAAATTGCCCATT 57.294 28.000 1.53 0.00 0.00 3.16
2430 2508 7.521871 TGAATTGCTTAAAAATTGCCCATTT 57.478 28.000 1.53 0.00 36.57 2.32
2431 2509 7.592051 TGAATTGCTTAAAAATTGCCCATTTC 58.408 30.769 1.53 0.00 33.60 2.17
2432 2510 7.447853 TGAATTGCTTAAAAATTGCCCATTTCT 59.552 29.630 1.53 0.00 33.60 2.52
2433 2511 7.764141 ATTGCTTAAAAATTGCCCATTTCTT 57.236 28.000 0.00 0.00 33.60 2.52
2434 2512 6.557291 TGCTTAAAAATTGCCCATTTCTTG 57.443 33.333 0.00 0.00 33.60 3.02
2435 2513 5.048852 TGCTTAAAAATTGCCCATTTCTTGC 60.049 36.000 0.00 0.00 33.60 4.01
2436 2514 5.048852 GCTTAAAAATTGCCCATTTCTTGCA 60.049 36.000 0.00 0.00 33.60 4.08
2438 2516 5.441709 AAAAATTGCCCATTTCTTGCAAG 57.558 34.783 20.81 20.81 46.90 4.01
2439 2517 2.773993 ATTGCCCATTTCTTGCAAGG 57.226 45.000 25.73 11.07 46.90 3.61
2440 2518 1.714541 TTGCCCATTTCTTGCAAGGA 58.285 45.000 25.73 15.86 39.86 3.36
2441 2519 1.941377 TGCCCATTTCTTGCAAGGAT 58.059 45.000 25.73 16.77 30.85 3.24
2442 2520 1.826720 TGCCCATTTCTTGCAAGGATC 59.173 47.619 25.73 9.49 30.85 3.36
2443 2521 2.105766 GCCCATTTCTTGCAAGGATCT 58.894 47.619 25.73 5.57 0.00 2.75
2444 2522 2.159142 GCCCATTTCTTGCAAGGATCTG 60.159 50.000 25.73 16.79 0.00 2.90
2445 2523 3.359033 CCCATTTCTTGCAAGGATCTGA 58.641 45.455 25.73 2.66 0.00 3.27
2446 2524 3.958798 CCCATTTCTTGCAAGGATCTGAT 59.041 43.478 25.73 5.19 0.00 2.90
2447 2525 5.135383 CCCATTTCTTGCAAGGATCTGATA 58.865 41.667 25.73 1.44 0.00 2.15
2448 2526 5.773680 CCCATTTCTTGCAAGGATCTGATAT 59.226 40.000 25.73 4.03 0.00 1.63
2449 2527 6.294564 CCCATTTCTTGCAAGGATCTGATATG 60.295 42.308 25.73 15.71 0.00 1.78
2450 2528 5.762825 TTTCTTGCAAGGATCTGATATGC 57.237 39.130 25.73 12.86 37.52 3.14
2451 2529 3.748083 TCTTGCAAGGATCTGATATGCC 58.252 45.455 25.73 3.64 36.20 4.40
2452 2530 3.136992 TCTTGCAAGGATCTGATATGCCA 59.863 43.478 25.73 0.00 36.20 4.92
2453 2531 3.801307 TGCAAGGATCTGATATGCCAT 57.199 42.857 15.58 0.00 36.20 4.40
2454 2532 3.682696 TGCAAGGATCTGATATGCCATC 58.317 45.455 15.58 0.00 36.20 3.51
2455 2533 3.073356 TGCAAGGATCTGATATGCCATCA 59.927 43.478 15.58 0.00 36.20 3.07
2456 2534 3.439476 GCAAGGATCTGATATGCCATCAC 59.561 47.826 9.98 0.00 0.00 3.06
2457 2535 4.648651 CAAGGATCTGATATGCCATCACA 58.351 43.478 0.00 0.00 0.00 3.58
2458 2536 5.254115 CAAGGATCTGATATGCCATCACAT 58.746 41.667 0.00 0.00 0.00 3.21
2459 2537 5.100344 AGGATCTGATATGCCATCACATC 57.900 43.478 0.00 5.57 0.00 3.06
2460 2538 4.783763 AGGATCTGATATGCCATCACATCT 59.216 41.667 11.07 0.32 27.85 2.90
2461 2539 5.251005 AGGATCTGATATGCCATCACATCTT 59.749 40.000 11.07 4.16 27.85 2.40
2462 2540 5.944599 GGATCTGATATGCCATCACATCTTT 59.055 40.000 11.07 0.00 27.85 2.52
2463 2541 7.037802 AGGATCTGATATGCCATCACATCTTTA 60.038 37.037 11.07 0.00 27.85 1.85
2464 2542 7.774157 GGATCTGATATGCCATCACATCTTTAT 59.226 37.037 11.07 0.00 27.85 1.40
2465 2543 9.175312 GATCTGATATGCCATCACATCTTTATT 57.825 33.333 6.47 0.00 27.85 1.40
2466 2544 8.929260 TCTGATATGCCATCACATCTTTATTT 57.071 30.769 0.00 0.00 27.85 1.40
2469 2547 9.234827 TGATATGCCATCACATCTTTATTTAGG 57.765 33.333 0.00 0.00 27.85 2.69
2470 2548 5.772825 TGCCATCACATCTTTATTTAGGC 57.227 39.130 0.00 0.00 38.82 3.93
2471 2549 5.448654 TGCCATCACATCTTTATTTAGGCT 58.551 37.500 0.00 0.00 39.10 4.58
2472 2550 5.300034 TGCCATCACATCTTTATTTAGGCTG 59.700 40.000 0.00 0.00 39.10 4.85
2473 2551 5.766222 CCATCACATCTTTATTTAGGCTGC 58.234 41.667 0.00 0.00 0.00 5.25
2474 2552 5.533903 CCATCACATCTTTATTTAGGCTGCT 59.466 40.000 0.00 0.00 0.00 4.24
2475 2553 6.436261 CATCACATCTTTATTTAGGCTGCTG 58.564 40.000 0.00 0.00 0.00 4.41
2476 2554 5.500234 TCACATCTTTATTTAGGCTGCTGT 58.500 37.500 0.00 0.00 0.00 4.40
2477 2555 6.649155 TCACATCTTTATTTAGGCTGCTGTA 58.351 36.000 0.00 0.00 0.00 2.74
2478 2556 6.763135 TCACATCTTTATTTAGGCTGCTGTAG 59.237 38.462 0.00 0.00 0.00 2.74
2479 2557 6.017605 CACATCTTTATTTAGGCTGCTGTAGG 60.018 42.308 0.00 0.00 0.00 3.18
2480 2558 5.036117 TCTTTATTTAGGCTGCTGTAGGG 57.964 43.478 0.00 0.00 0.00 3.53
2481 2559 2.930826 TATTTAGGCTGCTGTAGGGC 57.069 50.000 0.00 0.00 0.00 5.19
2482 2560 0.179045 ATTTAGGCTGCTGTAGGGCG 60.179 55.000 0.00 0.00 34.52 6.13
2483 2561 1.261938 TTTAGGCTGCTGTAGGGCGA 61.262 55.000 0.00 0.00 34.52 5.54
2484 2562 1.261938 TTAGGCTGCTGTAGGGCGAA 61.262 55.000 0.00 0.00 34.52 4.70
2485 2563 1.261938 TAGGCTGCTGTAGGGCGAAA 61.262 55.000 0.00 0.00 34.52 3.46
2486 2564 1.452108 GGCTGCTGTAGGGCGAAAT 60.452 57.895 0.00 0.00 34.52 2.17
2487 2565 1.440145 GGCTGCTGTAGGGCGAAATC 61.440 60.000 0.00 0.00 34.52 2.17
2488 2566 0.744414 GCTGCTGTAGGGCGAAATCA 60.744 55.000 0.00 0.00 34.52 2.57
2489 2567 1.737838 CTGCTGTAGGGCGAAATCAA 58.262 50.000 0.00 0.00 34.52 2.57
2490 2568 2.083774 CTGCTGTAGGGCGAAATCAAA 58.916 47.619 0.00 0.00 34.52 2.69
2491 2569 2.083774 TGCTGTAGGGCGAAATCAAAG 58.916 47.619 0.00 0.00 34.52 2.77
2492 2570 2.084546 GCTGTAGGGCGAAATCAAAGT 58.915 47.619 0.00 0.00 0.00 2.66
2493 2571 2.096013 GCTGTAGGGCGAAATCAAAGTC 59.904 50.000 0.00 0.00 0.00 3.01
2494 2572 3.334691 CTGTAGGGCGAAATCAAAGTCA 58.665 45.455 0.00 0.00 0.00 3.41
2495 2573 3.941483 CTGTAGGGCGAAATCAAAGTCAT 59.059 43.478 0.00 0.00 0.00 3.06
2496 2574 4.331968 TGTAGGGCGAAATCAAAGTCATT 58.668 39.130 0.00 0.00 0.00 2.57
2497 2575 4.764823 TGTAGGGCGAAATCAAAGTCATTT 59.235 37.500 0.00 0.00 0.00 2.32
2498 2576 5.941058 TGTAGGGCGAAATCAAAGTCATTTA 59.059 36.000 0.00 0.00 0.00 1.40
2499 2577 5.567138 AGGGCGAAATCAAAGTCATTTAG 57.433 39.130 0.00 0.00 0.00 1.85
2500 2578 4.105486 GGGCGAAATCAAAGTCATTTAGC 58.895 43.478 0.00 2.67 39.68 3.09
2501 2579 4.142381 GGGCGAAATCAAAGTCATTTAGCT 60.142 41.667 9.22 0.00 40.05 3.32
2502 2580 5.402398 GGCGAAATCAAAGTCATTTAGCTT 58.598 37.500 0.00 0.00 40.05 3.74
2503 2581 6.404293 GGGCGAAATCAAAGTCATTTAGCTTA 60.404 38.462 0.00 0.00 40.05 3.09
2504 2582 7.196331 GGCGAAATCAAAGTCATTTAGCTTAT 58.804 34.615 0.00 0.00 40.05 1.73
2505 2583 7.702348 GGCGAAATCAAAGTCATTTAGCTTATT 59.298 33.333 0.00 0.00 40.05 1.40
2506 2584 9.076596 GCGAAATCAAAGTCATTTAGCTTATTT 57.923 29.630 0.00 0.00 38.26 1.40
2533 2611 8.748380 TTCATTCTAGCATGTATAATGACTCG 57.252 34.615 2.21 0.00 36.56 4.18
2534 2612 7.886338 TCATTCTAGCATGTATAATGACTCGT 58.114 34.615 2.21 0.00 32.99 4.18
2535 2613 7.809806 TCATTCTAGCATGTATAATGACTCGTG 59.190 37.037 2.21 0.00 32.99 4.35
2536 2614 6.013842 TCTAGCATGTATAATGACTCGTGG 57.986 41.667 0.00 0.00 0.00 4.94
2537 2615 3.393800 AGCATGTATAATGACTCGTGGC 58.606 45.455 0.00 0.00 0.00 5.01
2538 2616 3.130633 GCATGTATAATGACTCGTGGCA 58.869 45.455 0.00 0.00 0.00 4.92
2539 2617 3.748048 GCATGTATAATGACTCGTGGCAT 59.252 43.478 0.00 0.00 0.00 4.40
2540 2618 4.143030 GCATGTATAATGACTCGTGGCATC 60.143 45.833 6.23 0.00 0.00 3.91
2541 2619 4.664150 TGTATAATGACTCGTGGCATCA 57.336 40.909 6.23 0.00 0.00 3.07
2542 2620 4.620982 TGTATAATGACTCGTGGCATCAG 58.379 43.478 6.23 0.00 0.00 2.90
2543 2621 3.827008 ATAATGACTCGTGGCATCAGT 57.173 42.857 6.23 1.22 0.00 3.41
2544 2622 2.479566 AATGACTCGTGGCATCAGTT 57.520 45.000 6.23 0.00 0.00 3.16
2545 2623 2.479566 ATGACTCGTGGCATCAGTTT 57.520 45.000 0.00 0.00 0.00 2.66
2546 2624 1.795768 TGACTCGTGGCATCAGTTTC 58.204 50.000 0.00 0.00 0.00 2.78
2547 2625 1.344438 TGACTCGTGGCATCAGTTTCT 59.656 47.619 0.00 0.00 0.00 2.52
2548 2626 2.560981 TGACTCGTGGCATCAGTTTCTA 59.439 45.455 0.00 0.00 0.00 2.10
2549 2627 3.182967 GACTCGTGGCATCAGTTTCTAG 58.817 50.000 0.00 0.00 0.00 2.43
2550 2628 2.093973 ACTCGTGGCATCAGTTTCTAGG 60.094 50.000 0.00 0.00 0.00 3.02
2551 2629 1.207089 TCGTGGCATCAGTTTCTAGGG 59.793 52.381 0.00 0.00 0.00 3.53
2552 2630 1.383523 GTGGCATCAGTTTCTAGGGC 58.616 55.000 0.00 0.00 0.00 5.19
2553 2631 0.255890 TGGCATCAGTTTCTAGGGCC 59.744 55.000 0.00 0.00 40.29 5.80
2554 2632 0.548510 GGCATCAGTTTCTAGGGCCT 59.451 55.000 12.58 12.58 37.00 5.19
2555 2633 1.673168 GCATCAGTTTCTAGGGCCTG 58.327 55.000 18.53 6.47 0.00 4.85
2556 2634 1.065126 GCATCAGTTTCTAGGGCCTGT 60.065 52.381 18.53 0.00 0.00 4.00
2557 2635 2.619074 GCATCAGTTTCTAGGGCCTGTT 60.619 50.000 18.53 0.00 0.00 3.16
2558 2636 3.690460 CATCAGTTTCTAGGGCCTGTTT 58.310 45.455 18.53 0.00 0.00 2.83
2559 2637 4.843728 CATCAGTTTCTAGGGCCTGTTTA 58.156 43.478 18.53 0.00 0.00 2.01
2560 2638 4.553330 TCAGTTTCTAGGGCCTGTTTAG 57.447 45.455 18.53 5.34 0.00 1.85
2561 2639 4.164981 TCAGTTTCTAGGGCCTGTTTAGA 58.835 43.478 18.53 8.15 0.00 2.10
2562 2640 4.595781 TCAGTTTCTAGGGCCTGTTTAGAA 59.404 41.667 18.53 14.45 33.02 2.10
2563 2641 4.695928 CAGTTTCTAGGGCCTGTTTAGAAC 59.304 45.833 18.53 11.85 34.22 3.01
2564 2642 4.349930 AGTTTCTAGGGCCTGTTTAGAACA 59.650 41.667 18.53 5.58 39.52 3.18
2565 2643 3.975168 TCTAGGGCCTGTTTAGAACAC 57.025 47.619 18.53 0.00 36.25 3.32
2566 2644 3.244582 TCTAGGGCCTGTTTAGAACACA 58.755 45.455 18.53 0.00 36.25 3.72
2567 2645 3.844211 TCTAGGGCCTGTTTAGAACACAT 59.156 43.478 18.53 0.00 36.25 3.21
2568 2646 3.073274 AGGGCCTGTTTAGAACACATC 57.927 47.619 4.50 0.00 36.25 3.06
2569 2647 2.375174 AGGGCCTGTTTAGAACACATCA 59.625 45.455 4.50 0.00 36.25 3.07
2570 2648 3.010584 AGGGCCTGTTTAGAACACATCAT 59.989 43.478 4.50 0.00 36.25 2.45
2571 2649 3.378427 GGGCCTGTTTAGAACACATCATC 59.622 47.826 0.84 0.00 36.25 2.92
2572 2650 4.265073 GGCCTGTTTAGAACACATCATCT 58.735 43.478 0.00 0.00 36.25 2.90
2573 2651 4.333926 GGCCTGTTTAGAACACATCATCTC 59.666 45.833 0.00 0.00 36.25 2.75
2574 2652 4.333926 GCCTGTTTAGAACACATCATCTCC 59.666 45.833 0.00 0.00 36.25 3.71
2575 2653 5.738909 CCTGTTTAGAACACATCATCTCCT 58.261 41.667 0.00 0.00 36.25 3.69
2576 2654 6.176183 CCTGTTTAGAACACATCATCTCCTT 58.824 40.000 0.00 0.00 36.25 3.36
2577 2655 6.656693 CCTGTTTAGAACACATCATCTCCTTT 59.343 38.462 0.00 0.00 36.25 3.11
2578 2656 7.824289 CCTGTTTAGAACACATCATCTCCTTTA 59.176 37.037 0.00 0.00 36.25 1.85
2579 2657 8.547967 TGTTTAGAACACATCATCTCCTTTAC 57.452 34.615 0.00 0.00 36.25 2.01
2580 2658 8.154203 TGTTTAGAACACATCATCTCCTTTACA 58.846 33.333 0.00 0.00 36.25 2.41
2581 2659 8.999431 GTTTAGAACACATCATCTCCTTTACAA 58.001 33.333 0.00 0.00 0.00 2.41
2582 2660 9.739276 TTTAGAACACATCATCTCCTTTACAAT 57.261 29.630 0.00 0.00 0.00 2.71
2583 2661 9.739276 TTAGAACACATCATCTCCTTTACAATT 57.261 29.630 0.00 0.00 0.00 2.32
2584 2662 8.641498 AGAACACATCATCTCCTTTACAATTT 57.359 30.769 0.00 0.00 0.00 1.82
2585 2663 8.517878 AGAACACATCATCTCCTTTACAATTTG 58.482 33.333 0.00 0.00 0.00 2.32
2586 2664 7.161773 ACACATCATCTCCTTTACAATTTGG 57.838 36.000 0.78 0.00 0.00 3.28
2587 2665 6.721208 ACACATCATCTCCTTTACAATTTGGT 59.279 34.615 0.78 0.00 0.00 3.67
2588 2666 7.888021 ACACATCATCTCCTTTACAATTTGGTA 59.112 33.333 0.78 0.00 0.00 3.25
2589 2667 8.906867 CACATCATCTCCTTTACAATTTGGTAT 58.093 33.333 0.78 0.00 0.00 2.73
2590 2668 8.906867 ACATCATCTCCTTTACAATTTGGTATG 58.093 33.333 0.78 0.00 0.00 2.39
2591 2669 7.333528 TCATCTCCTTTACAATTTGGTATGC 57.666 36.000 0.78 0.00 0.00 3.14
2592 2670 7.118723 TCATCTCCTTTACAATTTGGTATGCT 58.881 34.615 0.78 0.00 0.00 3.79
2593 2671 6.757897 TCTCCTTTACAATTTGGTATGCTG 57.242 37.500 0.78 0.00 0.00 4.41
2594 2672 5.125417 TCTCCTTTACAATTTGGTATGCTGC 59.875 40.000 0.78 0.00 0.00 5.25
2595 2673 5.016173 TCCTTTACAATTTGGTATGCTGCT 58.984 37.500 0.00 0.00 0.00 4.24
2596 2674 6.184068 TCCTTTACAATTTGGTATGCTGCTA 58.816 36.000 0.00 0.00 0.00 3.49
2597 2675 6.661377 TCCTTTACAATTTGGTATGCTGCTAA 59.339 34.615 0.00 0.00 0.00 3.09
2598 2676 6.974622 CCTTTACAATTTGGTATGCTGCTAAG 59.025 38.462 0.00 0.00 0.00 2.18
2599 2677 7.148086 CCTTTACAATTTGGTATGCTGCTAAGA 60.148 37.037 0.00 0.00 0.00 2.10
2600 2678 5.824904 ACAATTTGGTATGCTGCTAAGAG 57.175 39.130 0.00 0.00 0.00 2.85
2601 2679 5.256474 ACAATTTGGTATGCTGCTAAGAGT 58.744 37.500 0.00 0.00 0.00 3.24
2602 2680 6.414732 ACAATTTGGTATGCTGCTAAGAGTA 58.585 36.000 0.00 0.00 0.00 2.59
2603 2681 6.884295 ACAATTTGGTATGCTGCTAAGAGTAA 59.116 34.615 0.00 0.00 0.00 2.24
2604 2682 7.066284 ACAATTTGGTATGCTGCTAAGAGTAAG 59.934 37.037 0.00 0.00 0.00 2.34
2605 2683 5.932619 TTGGTATGCTGCTAAGAGTAAGA 57.067 39.130 0.00 0.00 0.00 2.10
2606 2684 5.521906 TGGTATGCTGCTAAGAGTAAGAG 57.478 43.478 0.00 0.00 0.00 2.85
2607 2685 4.956700 TGGTATGCTGCTAAGAGTAAGAGT 59.043 41.667 0.00 0.00 0.00 3.24
2608 2686 5.163509 TGGTATGCTGCTAAGAGTAAGAGTG 60.164 44.000 0.00 0.00 0.00 3.51
2609 2687 3.238108 TGCTGCTAAGAGTAAGAGTGC 57.762 47.619 0.00 0.00 0.00 4.40
2610 2688 2.828520 TGCTGCTAAGAGTAAGAGTGCT 59.171 45.455 0.00 0.00 0.00 4.40
2611 2689 4.017126 TGCTGCTAAGAGTAAGAGTGCTA 58.983 43.478 0.00 0.00 0.00 3.49
2612 2690 4.142359 TGCTGCTAAGAGTAAGAGTGCTAC 60.142 45.833 0.00 0.00 0.00 3.58
2613 2691 4.735283 GCTGCTAAGAGTAAGAGTGCTACC 60.735 50.000 0.00 0.00 0.00 3.18
2614 2692 4.341487 TGCTAAGAGTAAGAGTGCTACCA 58.659 43.478 0.00 0.00 0.00 3.25
2615 2693 4.956700 TGCTAAGAGTAAGAGTGCTACCAT 59.043 41.667 0.00 0.00 0.00 3.55
2616 2694 5.067936 TGCTAAGAGTAAGAGTGCTACCATC 59.932 44.000 0.00 0.00 0.00 3.51
2617 2695 5.300792 GCTAAGAGTAAGAGTGCTACCATCT 59.699 44.000 0.00 0.00 0.00 2.90
2618 2696 6.487331 GCTAAGAGTAAGAGTGCTACCATCTA 59.513 42.308 0.00 0.00 0.00 1.98
2619 2697 7.013464 GCTAAGAGTAAGAGTGCTACCATCTAA 59.987 40.741 0.00 0.00 0.00 2.10
2620 2698 7.719871 AAGAGTAAGAGTGCTACCATCTAAA 57.280 36.000 0.00 0.00 0.00 1.85
2621 2699 7.719871 AGAGTAAGAGTGCTACCATCTAAAA 57.280 36.000 0.00 0.00 0.00 1.52
2622 2700 7.777095 AGAGTAAGAGTGCTACCATCTAAAAG 58.223 38.462 0.00 0.00 0.00 2.27
2623 2701 7.397761 AGAGTAAGAGTGCTACCATCTAAAAGT 59.602 37.037 0.00 0.00 0.00 2.66
2624 2702 8.591114 AGTAAGAGTGCTACCATCTAAAAGTA 57.409 34.615 0.00 0.00 0.00 2.24
2625 2703 8.688151 AGTAAGAGTGCTACCATCTAAAAGTAG 58.312 37.037 0.00 0.00 37.20 2.57
2626 2704 7.719871 AAGAGTGCTACCATCTAAAAGTAGA 57.280 36.000 0.00 0.00 40.68 2.59
2627 2705 7.102847 AGAGTGCTACCATCTAAAAGTAGAC 57.897 40.000 0.00 0.00 39.20 2.59
2628 2706 6.893005 AGAGTGCTACCATCTAAAAGTAGACT 59.107 38.462 0.00 0.00 39.20 3.24
2629 2707 8.053963 AGAGTGCTACCATCTAAAAGTAGACTA 58.946 37.037 0.00 0.00 39.20 2.59
2630 2708 8.591114 AGTGCTACCATCTAAAAGTAGACTAA 57.409 34.615 0.00 0.00 39.20 2.24
2631 2709 8.688151 AGTGCTACCATCTAAAAGTAGACTAAG 58.312 37.037 0.00 0.00 39.20 2.18
2632 2710 8.684520 GTGCTACCATCTAAAAGTAGACTAAGA 58.315 37.037 0.00 0.00 39.20 2.10
2633 2711 8.904834 TGCTACCATCTAAAAGTAGACTAAGAG 58.095 37.037 0.00 0.00 39.20 2.85
2634 2712 8.905850 GCTACCATCTAAAAGTAGACTAAGAGT 58.094 37.037 0.00 0.00 39.20 3.24
2636 2714 7.548967 ACCATCTAAAAGTAGACTAAGAGTGC 58.451 38.462 0.00 0.00 39.20 4.40
2637 2715 7.397761 ACCATCTAAAAGTAGACTAAGAGTGCT 59.602 37.037 0.00 0.00 39.20 4.40
2638 2716 8.904834 CCATCTAAAAGTAGACTAAGAGTGCTA 58.095 37.037 0.00 0.00 39.20 3.49
2639 2717 9.724839 CATCTAAAAGTAGACTAAGAGTGCTAC 57.275 37.037 0.00 0.00 39.20 3.58
2640 2718 9.689501 ATCTAAAAGTAGACTAAGAGTGCTACT 57.310 33.333 0.00 0.00 39.20 2.57
2643 2721 8.866970 AAAAGTAGACTAAGAGTGCTACTAGT 57.133 34.615 0.00 0.00 37.77 2.57
2644 2722 8.866970 AAAGTAGACTAAGAGTGCTACTAGTT 57.133 34.615 0.00 0.00 37.77 2.24
2645 2723 8.866970 AAGTAGACTAAGAGTGCTACTAGTTT 57.133 34.615 0.00 0.00 37.77 2.66
2646 2724 8.866970 AGTAGACTAAGAGTGCTACTAGTTTT 57.133 34.615 0.00 0.00 37.39 2.43
2647 2725 9.956640 AGTAGACTAAGAGTGCTACTAGTTTTA 57.043 33.333 0.00 0.00 37.39 1.52
2650 2728 9.911138 AGACTAAGAGTGCTACTAGTTTTAAAC 57.089 33.333 0.00 0.00 0.00 2.01
2651 2729 9.688592 GACTAAGAGTGCTACTAGTTTTAAACA 57.311 33.333 10.60 0.00 0.00 2.83
2655 2733 9.780186 AAGAGTGCTACTAGTTTTAAACAAGAT 57.220 29.630 10.60 0.00 0.00 2.40
2656 2734 9.780186 AGAGTGCTACTAGTTTTAAACAAGATT 57.220 29.630 10.60 0.00 0.00 2.40
2673 2751 9.515226 AAACAAGATTATAAAGGCTGTTACAGA 57.485 29.630 17.40 0.00 32.44 3.41
2674 2752 8.723942 ACAAGATTATAAAGGCTGTTACAGAG 57.276 34.615 17.40 0.00 32.44 3.35
2675 2753 8.322091 ACAAGATTATAAAGGCTGTTACAGAGT 58.678 33.333 17.40 0.00 32.44 3.24
2676 2754 9.817809 CAAGATTATAAAGGCTGTTACAGAGTA 57.182 33.333 17.40 2.22 32.44 2.59
2677 2755 9.819267 AAGATTATAAAGGCTGTTACAGAGTAC 57.181 33.333 17.40 2.82 32.44 2.73
2678 2756 8.978472 AGATTATAAAGGCTGTTACAGAGTACA 58.022 33.333 17.40 0.00 32.44 2.90
2679 2757 8.943909 ATTATAAAGGCTGTTACAGAGTACAC 57.056 34.615 17.40 0.00 32.44 2.90
2680 2758 4.682778 AAAGGCTGTTACAGAGTACACA 57.317 40.909 17.40 0.00 32.44 3.72
2681 2759 3.662247 AGGCTGTTACAGAGTACACAC 57.338 47.619 17.40 0.00 32.44 3.82
2682 2760 2.299297 AGGCTGTTACAGAGTACACACC 59.701 50.000 17.40 4.97 32.44 4.16
2683 2761 2.036733 GGCTGTTACAGAGTACACACCA 59.963 50.000 17.40 0.00 32.44 4.17
2684 2762 3.057734 GCTGTTACAGAGTACACACCAC 58.942 50.000 17.40 0.00 32.44 4.16
2685 2763 3.243771 GCTGTTACAGAGTACACACCACT 60.244 47.826 17.40 0.00 32.44 4.00
2686 2764 4.547532 CTGTTACAGAGTACACACCACTC 58.452 47.826 6.50 0.00 42.30 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 1.739049 CTCGGTGCTTGCCCAAAAA 59.261 52.632 0.00 0.00 0.00 1.94
523 537 3.508840 CATCCGCGGCCCAAGTTC 61.509 66.667 23.51 0.00 0.00 3.01
541 555 2.286772 CGCTTTGTGTCCGCTTTTAACT 60.287 45.455 0.00 0.00 0.00 2.24
544 558 0.589223 CCGCTTTGTGTCCGCTTTTA 59.411 50.000 0.00 0.00 0.00 1.52
607 621 2.613133 CCGTCCGTTTGGTGTAAAAAGA 59.387 45.455 0.00 0.00 36.30 2.52
609 623 1.674962 CCCGTCCGTTTGGTGTAAAAA 59.325 47.619 0.00 0.00 36.30 1.94
616 630 4.636435 CTGCCCCGTCCGTTTGGT 62.636 66.667 0.00 0.00 36.30 3.67
632 646 2.203640 TGTCCTGTCCGCCTGTCT 60.204 61.111 0.00 0.00 0.00 3.41
633 647 2.262915 CTGTCCTGTCCGCCTGTC 59.737 66.667 0.00 0.00 0.00 3.51
634 648 3.314331 CCTGTCCTGTCCGCCTGT 61.314 66.667 0.00 0.00 0.00 4.00
635 649 4.087892 CCCTGTCCTGTCCGCCTG 62.088 72.222 0.00 0.00 0.00 4.85
636 650 3.233919 TACCCTGTCCTGTCCGCCT 62.234 63.158 0.00 0.00 0.00 5.52
637 651 2.682494 TACCCTGTCCTGTCCGCC 60.682 66.667 0.00 0.00 0.00 6.13
638 652 1.542187 AACTACCCTGTCCTGTCCGC 61.542 60.000 0.00 0.00 0.00 5.54
649 663 1.609783 GCCTCATGCCAACTACCCT 59.390 57.895 0.00 0.00 0.00 4.34
651 665 1.819632 CCGCCTCATGCCAACTACC 60.820 63.158 0.00 0.00 36.24 3.18
652 666 2.472909 GCCGCCTCATGCCAACTAC 61.473 63.158 0.00 0.00 36.24 2.73
653 667 2.124736 GCCGCCTCATGCCAACTA 60.125 61.111 0.00 0.00 36.24 2.24
660 674 3.490759 GTGTGTCGCCGCCTCATG 61.491 66.667 0.00 0.00 0.00 3.07
667 681 2.202557 TATGCTCGTGTGTCGCCG 60.203 61.111 0.00 0.00 39.67 6.46
676 690 0.178068 GGTGATGGTGGTATGCTCGT 59.822 55.000 0.00 0.00 0.00 4.18
677 691 0.875908 CGGTGATGGTGGTATGCTCG 60.876 60.000 0.00 0.00 0.00 5.03
685 699 2.506217 CGTCGACGGTGATGGTGG 60.506 66.667 29.70 0.00 35.37 4.61
686 700 3.179265 GCGTCGACGGTGATGGTG 61.179 66.667 36.13 8.46 40.23 4.17
706 720 2.107141 CTCTCGTTCGGGCCCATC 59.893 66.667 24.92 10.26 0.00 3.51
714 728 3.093278 GCCATTGGCTCTCGTTCG 58.907 61.111 20.66 0.00 46.69 3.95
727 741 1.684629 GCAAAAACCCATGGGCCAT 59.315 52.632 31.73 14.78 39.32 4.40
753 767 3.321968 GCCCAACATCTGTTTCCTCTTTT 59.678 43.478 0.00 0.00 35.83 2.27
757 771 2.206576 AGCCCAACATCTGTTTCCTC 57.793 50.000 0.00 0.00 35.83 3.71
758 772 2.519013 GAAGCCCAACATCTGTTTCCT 58.481 47.619 0.00 0.00 35.83 3.36
759 773 1.546029 GGAAGCCCAACATCTGTTTCC 59.454 52.381 0.00 0.00 35.83 3.13
762 776 2.946947 CGGAAGCCCAACATCTGTT 58.053 52.632 0.00 0.00 39.12 3.16
763 777 4.722193 CGGAAGCCCAACATCTGT 57.278 55.556 0.00 0.00 0.00 3.41
805 822 1.375326 GGAAGAAACCTCCTGCGGT 59.625 57.895 0.00 0.00 39.48 5.68
808 825 2.041115 GCCGGAAGAAACCTCCTGC 61.041 63.158 5.05 0.00 0.00 4.85
873 895 2.683933 GAGAGAAGTGGCGGGGGA 60.684 66.667 0.00 0.00 0.00 4.81
914 936 0.323360 ATGTTGTTGGGGATGGACGG 60.323 55.000 0.00 0.00 0.00 4.79
931 953 1.396653 GGGTCTGGATTTGGCAGATG 58.603 55.000 0.00 0.00 0.00 2.90
1077 1107 0.610232 CCCCTCCAACTTGCTCCAAG 60.610 60.000 3.57 3.57 45.85 3.61
1078 1108 1.065410 TCCCCTCCAACTTGCTCCAA 61.065 55.000 0.00 0.00 0.00 3.53
1280 1310 3.157949 CCTCCGCTTCCTCCTCCC 61.158 72.222 0.00 0.00 0.00 4.30
1691 1727 7.128331 CAGTTCATAAACACACACAAAGAGAG 58.872 38.462 0.00 0.00 37.88 3.20
1697 1733 4.733230 GCAGCAGTTCATAAACACACACAA 60.733 41.667 0.00 0.00 37.88 3.33
1699 1735 3.003689 AGCAGCAGTTCATAAACACACAC 59.996 43.478 0.00 0.00 37.88 3.82
1700 1736 3.213506 AGCAGCAGTTCATAAACACACA 58.786 40.909 0.00 0.00 37.88 3.72
1853 1891 9.057089 GCACTACACAAGCCTAAATAAAGATAT 57.943 33.333 0.00 0.00 0.00 1.63
1905 1949 3.434309 AGCTAAATGACTGCCCAATTGT 58.566 40.909 4.43 0.00 0.00 2.71
1906 1950 3.444742 TGAGCTAAATGACTGCCCAATTG 59.555 43.478 0.00 0.00 0.00 2.32
1907 1951 3.700538 TGAGCTAAATGACTGCCCAATT 58.299 40.909 0.00 0.00 0.00 2.32
1908 1952 3.370840 TGAGCTAAATGACTGCCCAAT 57.629 42.857 0.00 0.00 0.00 3.16
1909 1953 2.877097 TGAGCTAAATGACTGCCCAA 57.123 45.000 0.00 0.00 0.00 4.12
1910 1954 2.025981 ACATGAGCTAAATGACTGCCCA 60.026 45.455 14.25 0.00 0.00 5.36
1911 1955 2.615912 GACATGAGCTAAATGACTGCCC 59.384 50.000 14.25 0.00 0.00 5.36
1912 1956 3.539604 AGACATGAGCTAAATGACTGCC 58.460 45.455 14.25 1.07 30.55 4.85
1913 1957 5.233902 CACTAGACATGAGCTAAATGACTGC 59.766 44.000 18.04 6.15 33.24 4.40
1914 1958 6.475076 GTCACTAGACATGAGCTAAATGACTG 59.525 42.308 18.04 12.58 44.34 3.51
1915 1959 6.568869 GTCACTAGACATGAGCTAAATGACT 58.431 40.000 21.15 14.63 44.34 3.41
1916 1960 6.820470 GTCACTAGACATGAGCTAAATGAC 57.180 41.667 14.25 17.78 44.34 3.06
1930 1974 5.176407 ACTAATGCGATGAGTCACTAGAC 57.824 43.478 0.00 0.00 45.31 2.59
1931 1975 5.836821 AACTAATGCGATGAGTCACTAGA 57.163 39.130 0.00 0.00 0.00 2.43
1932 1976 6.893958 AAAACTAATGCGATGAGTCACTAG 57.106 37.500 0.00 0.00 0.00 2.57
1933 1977 7.491372 CCTAAAAACTAATGCGATGAGTCACTA 59.509 37.037 0.00 0.00 0.00 2.74
1934 1978 6.313905 CCTAAAAACTAATGCGATGAGTCACT 59.686 38.462 0.00 0.00 0.00 3.41
1935 1979 6.456988 CCCTAAAAACTAATGCGATGAGTCAC 60.457 42.308 0.00 0.00 0.00 3.67
1936 1980 5.584649 CCCTAAAAACTAATGCGATGAGTCA 59.415 40.000 0.00 0.00 0.00 3.41
1937 1981 5.504173 GCCCTAAAAACTAATGCGATGAGTC 60.504 44.000 0.00 0.00 0.00 3.36
1938 1982 4.335594 GCCCTAAAAACTAATGCGATGAGT 59.664 41.667 0.00 0.00 0.00 3.41
1939 1983 4.261197 GGCCCTAAAAACTAATGCGATGAG 60.261 45.833 0.00 0.00 0.00 2.90
1940 1984 3.630312 GGCCCTAAAAACTAATGCGATGA 59.370 43.478 0.00 0.00 0.00 2.92
1941 1985 3.632145 AGGCCCTAAAAACTAATGCGATG 59.368 43.478 0.00 0.00 0.00 3.84
1942 1986 3.632145 CAGGCCCTAAAAACTAATGCGAT 59.368 43.478 0.00 0.00 0.00 4.58
1943 1987 3.013921 CAGGCCCTAAAAACTAATGCGA 58.986 45.455 0.00 0.00 0.00 5.10
1944 1988 2.752903 ACAGGCCCTAAAAACTAATGCG 59.247 45.455 0.00 0.00 0.00 4.73
1945 1989 4.017126 AGACAGGCCCTAAAAACTAATGC 58.983 43.478 0.00 0.00 0.00 3.56
1951 1995 4.648651 TGTTCTAGACAGGCCCTAAAAAC 58.351 43.478 0.00 2.74 33.40 2.43
1952 1996 4.986054 TGTTCTAGACAGGCCCTAAAAA 57.014 40.909 0.00 0.00 33.40 1.94
1974 2018 9.472361 GCAGCATATCAAATTGTAAAGATGATT 57.528 29.630 0.00 0.00 36.71 2.57
1976 2020 8.229253 AGCAGCATATCAAATTGTAAAGATGA 57.771 30.769 0.00 0.00 0.00 2.92
1977 2021 9.955208 TTAGCAGCATATCAAATTGTAAAGATG 57.045 29.630 0.00 0.00 0.00 2.90
1991 2038 6.091986 GGCACTCTTATTCTTAGCAGCATATC 59.908 42.308 0.00 0.00 0.00 1.63
1992 2039 5.936956 GGCACTCTTATTCTTAGCAGCATAT 59.063 40.000 0.00 0.00 0.00 1.78
2006 2053 3.245229 TGTTTGGATGGTGGCACTCTTAT 60.245 43.478 18.45 7.21 0.00 1.73
2016 2063 7.329226 GTCTCAATTTTGTATGTTTGGATGGTG 59.671 37.037 0.00 0.00 0.00 4.17
2023 2070 8.292448 AGTAGCAGTCTCAATTTTGTATGTTTG 58.708 33.333 0.00 0.00 0.00 2.93
2038 2087 9.372369 ACAAAGTATGAATTTAGTAGCAGTCTC 57.628 33.333 0.00 0.00 0.00 3.36
2062 2111 5.304871 TGGTGTGTACTCTGTAATAACCACA 59.695 40.000 0.00 0.00 30.48 4.17
2067 2116 6.659745 ACTGTGGTGTGTACTCTGTAATAA 57.340 37.500 0.00 0.00 0.00 1.40
2134 2201 3.136443 TGGACTGTCATTTCCTGTTCAGT 59.864 43.478 10.38 0.00 40.67 3.41
2155 2222 9.182214 ACCAATAAATATAGGCAGCAATAGATG 57.818 33.333 0.00 0.00 0.00 2.90
2164 2231 4.323417 TGCGGACCAATAAATATAGGCAG 58.677 43.478 0.00 0.00 0.00 4.85
2170 2237 4.718961 AGCTCTTGCGGACCAATAAATAT 58.281 39.130 0.00 0.00 45.42 1.28
2191 2258 8.547967 ACCGCTACATATAAACCAAATCATAG 57.452 34.615 0.00 0.00 0.00 2.23
2235 2304 4.310769 AGCACTCTTATGACAGTGTTCAC 58.689 43.478 0.00 0.00 41.88 3.18
2268 2337 4.104831 AGCTTCCTAACCAGACATTACCT 58.895 43.478 0.00 0.00 0.00 3.08
2270 2339 6.757478 GTCTTAGCTTCCTAACCAGACATTAC 59.243 42.308 0.00 0.00 31.58 1.89
2271 2340 6.405508 CGTCTTAGCTTCCTAACCAGACATTA 60.406 42.308 0.00 0.00 31.09 1.90
2272 2341 5.624738 CGTCTTAGCTTCCTAACCAGACATT 60.625 44.000 0.00 0.00 31.09 2.71
2273 2342 4.142138 CGTCTTAGCTTCCTAACCAGACAT 60.142 45.833 0.00 0.00 31.09 3.06
2275 2344 3.193056 ACGTCTTAGCTTCCTAACCAGAC 59.807 47.826 0.00 0.00 30.63 3.51
2323 2401 1.237285 CCTGTGGCAAGAGGGAAACG 61.237 60.000 0.00 0.00 33.04 3.60
2340 2418 1.056700 ACTTGGAGCCAGTGTGTCCT 61.057 55.000 8.95 0.00 0.00 3.85
2346 2424 2.270352 TTAACCACTTGGAGCCAGTG 57.730 50.000 1.14 10.32 38.94 3.66
2353 2431 9.403583 GATAGGAATACATTTTAACCACTTGGA 57.596 33.333 1.14 0.00 38.94 3.53
2354 2432 8.630037 GGATAGGAATACATTTTAACCACTTGG 58.370 37.037 0.00 0.00 42.17 3.61
2357 2435 7.502561 GCAGGATAGGAATACATTTTAACCACT 59.497 37.037 0.00 0.00 0.00 4.00
2358 2436 7.255486 GGCAGGATAGGAATACATTTTAACCAC 60.255 40.741 0.00 0.00 0.00 4.16
2359 2437 6.775629 GGCAGGATAGGAATACATTTTAACCA 59.224 38.462 0.00 0.00 0.00 3.67
2360 2438 6.775629 TGGCAGGATAGGAATACATTTTAACC 59.224 38.462 0.00 0.00 0.00 2.85
2361 2439 7.817418 TGGCAGGATAGGAATACATTTTAAC 57.183 36.000 0.00 0.00 0.00 2.01
2362 2440 8.004215 ACATGGCAGGATAGGAATACATTTTAA 58.996 33.333 5.99 0.00 0.00 1.52
2363 2441 7.526041 ACATGGCAGGATAGGAATACATTTTA 58.474 34.615 5.99 0.00 0.00 1.52
2364 2442 6.376248 ACATGGCAGGATAGGAATACATTTT 58.624 36.000 5.99 0.00 0.00 1.82
2365 2443 5.957132 ACATGGCAGGATAGGAATACATTT 58.043 37.500 5.99 0.00 0.00 2.32
2366 2444 5.589367 ACATGGCAGGATAGGAATACATT 57.411 39.130 5.99 0.00 0.00 2.71
2367 2445 6.702449 TTACATGGCAGGATAGGAATACAT 57.298 37.500 5.99 0.00 0.00 2.29
2368 2446 6.272090 TCATTACATGGCAGGATAGGAATACA 59.728 38.462 5.99 0.00 0.00 2.29
2369 2447 6.711277 TCATTACATGGCAGGATAGGAATAC 58.289 40.000 5.99 0.00 0.00 1.89
2370 2448 6.950860 TCATTACATGGCAGGATAGGAATA 57.049 37.500 5.99 0.00 0.00 1.75
2371 2449 5.848286 TCATTACATGGCAGGATAGGAAT 57.152 39.130 5.99 0.00 0.00 3.01
2372 2450 5.645056 TTCATTACATGGCAGGATAGGAA 57.355 39.130 5.99 3.76 0.00 3.36
2373 2451 5.132648 ACTTTCATTACATGGCAGGATAGGA 59.867 40.000 5.99 0.00 0.00 2.94
2374 2452 5.240183 CACTTTCATTACATGGCAGGATAGG 59.760 44.000 5.99 0.00 0.00 2.57
2375 2453 5.240183 CCACTTTCATTACATGGCAGGATAG 59.760 44.000 5.99 0.00 0.00 2.08
2376 2454 5.104151 TCCACTTTCATTACATGGCAGGATA 60.104 40.000 5.99 0.00 0.00 2.59
2377 2455 3.956199 CCACTTTCATTACATGGCAGGAT 59.044 43.478 5.99 0.00 0.00 3.24
2378 2456 3.010027 TCCACTTTCATTACATGGCAGGA 59.990 43.478 5.99 0.00 0.00 3.86
2379 2457 3.355378 TCCACTTTCATTACATGGCAGG 58.645 45.455 0.00 0.00 0.00 4.85
2380 2458 4.380867 GGTTCCACTTTCATTACATGGCAG 60.381 45.833 0.00 0.00 0.00 4.85
2381 2459 3.509575 GGTTCCACTTTCATTACATGGCA 59.490 43.478 0.00 0.00 0.00 4.92
2382 2460 3.763897 AGGTTCCACTTTCATTACATGGC 59.236 43.478 0.00 0.00 0.00 4.40
2383 2461 6.828273 TCATAGGTTCCACTTTCATTACATGG 59.172 38.462 0.00 0.00 0.00 3.66
2384 2462 7.864108 TCATAGGTTCCACTTTCATTACATG 57.136 36.000 0.00 0.00 0.00 3.21
2385 2463 9.479549 AATTCATAGGTTCCACTTTCATTACAT 57.520 29.630 0.00 0.00 0.00 2.29
2386 2464 8.739039 CAATTCATAGGTTCCACTTTCATTACA 58.261 33.333 0.00 0.00 0.00 2.41
2387 2465 7.702348 GCAATTCATAGGTTCCACTTTCATTAC 59.298 37.037 0.00 0.00 0.00 1.89
2388 2466 7.615365 AGCAATTCATAGGTTCCACTTTCATTA 59.385 33.333 0.00 0.00 0.00 1.90
2389 2467 6.438425 AGCAATTCATAGGTTCCACTTTCATT 59.562 34.615 0.00 0.00 0.00 2.57
2390 2468 5.954150 AGCAATTCATAGGTTCCACTTTCAT 59.046 36.000 0.00 0.00 0.00 2.57
2391 2469 5.324409 AGCAATTCATAGGTTCCACTTTCA 58.676 37.500 0.00 0.00 0.00 2.69
2392 2470 5.904362 AGCAATTCATAGGTTCCACTTTC 57.096 39.130 0.00 0.00 0.00 2.62
2393 2471 7.775053 TTAAGCAATTCATAGGTTCCACTTT 57.225 32.000 0.00 0.00 0.00 2.66
2394 2472 7.775053 TTTAAGCAATTCATAGGTTCCACTT 57.225 32.000 0.00 0.00 0.00 3.16
2395 2473 7.775053 TTTTAAGCAATTCATAGGTTCCACT 57.225 32.000 0.00 0.00 0.00 4.00
2396 2474 9.435688 AATTTTTAAGCAATTCATAGGTTCCAC 57.564 29.630 0.00 0.00 0.00 4.02
2397 2475 9.434420 CAATTTTTAAGCAATTCATAGGTTCCA 57.566 29.630 0.00 0.00 0.00 3.53
2398 2476 8.390354 GCAATTTTTAAGCAATTCATAGGTTCC 58.610 33.333 0.00 0.00 0.00 3.62
2399 2477 8.390354 GGCAATTTTTAAGCAATTCATAGGTTC 58.610 33.333 0.00 0.00 0.00 3.62
2400 2478 7.336679 GGGCAATTTTTAAGCAATTCATAGGTT 59.663 33.333 0.00 0.00 0.00 3.50
2401 2479 6.823182 GGGCAATTTTTAAGCAATTCATAGGT 59.177 34.615 0.00 0.00 0.00 3.08
2402 2480 6.822676 TGGGCAATTTTTAAGCAATTCATAGG 59.177 34.615 0.00 0.00 0.00 2.57
2403 2481 7.846644 TGGGCAATTTTTAAGCAATTCATAG 57.153 32.000 0.00 0.00 0.00 2.23
2404 2482 8.804912 AATGGGCAATTTTTAAGCAATTCATA 57.195 26.923 0.00 0.00 0.00 2.15
2405 2483 7.706100 AATGGGCAATTTTTAAGCAATTCAT 57.294 28.000 0.00 0.00 0.00 2.57
2406 2484 7.447853 AGAAATGGGCAATTTTTAAGCAATTCA 59.552 29.630 0.48 0.00 38.64 2.57
2407 2485 7.819644 AGAAATGGGCAATTTTTAAGCAATTC 58.180 30.769 0.48 0.00 38.64 2.17
2408 2486 7.764141 AGAAATGGGCAATTTTTAAGCAATT 57.236 28.000 0.48 0.00 38.64 2.32
2409 2487 7.595604 CAAGAAATGGGCAATTTTTAAGCAAT 58.404 30.769 0.48 0.00 38.64 3.56
2410 2488 6.514705 GCAAGAAATGGGCAATTTTTAAGCAA 60.515 34.615 0.48 0.00 38.64 3.91
2411 2489 5.048852 GCAAGAAATGGGCAATTTTTAAGCA 60.049 36.000 0.48 0.00 38.64 3.91
2412 2490 5.048852 TGCAAGAAATGGGCAATTTTTAAGC 60.049 36.000 0.48 5.05 38.64 3.09
2413 2491 6.557291 TGCAAGAAATGGGCAATTTTTAAG 57.443 33.333 0.48 0.00 38.64 1.85
2414 2492 6.016443 CCTTGCAAGAAATGGGCAATTTTTAA 60.016 34.615 28.05 0.00 45.43 1.52
2415 2493 5.472820 CCTTGCAAGAAATGGGCAATTTTTA 59.527 36.000 28.05 0.00 45.43 1.52
2416 2494 4.278919 CCTTGCAAGAAATGGGCAATTTTT 59.721 37.500 28.05 0.00 45.43 1.94
2417 2495 3.822167 CCTTGCAAGAAATGGGCAATTTT 59.178 39.130 28.05 0.00 45.43 1.82
2418 2496 3.072768 TCCTTGCAAGAAATGGGCAATTT 59.927 39.130 28.05 0.00 45.43 1.82
2419 2497 2.638855 TCCTTGCAAGAAATGGGCAATT 59.361 40.909 28.05 0.00 45.43 2.32
2420 2498 2.259012 TCCTTGCAAGAAATGGGCAAT 58.741 42.857 28.05 0.00 45.43 3.56
2421 2499 1.714541 TCCTTGCAAGAAATGGGCAA 58.285 45.000 28.05 0.00 44.50 4.52
2422 2500 1.826720 GATCCTTGCAAGAAATGGGCA 59.173 47.619 28.05 1.86 35.41 5.36
2423 2501 2.105766 AGATCCTTGCAAGAAATGGGC 58.894 47.619 28.05 9.24 0.00 5.36
2424 2502 3.359033 TCAGATCCTTGCAAGAAATGGG 58.641 45.455 28.05 10.96 0.00 4.00
2425 2503 6.678878 CATATCAGATCCTTGCAAGAAATGG 58.321 40.000 28.05 11.74 0.00 3.16
2426 2504 6.150318 GCATATCAGATCCTTGCAAGAAATG 58.850 40.000 28.05 18.58 33.58 2.32
2427 2505 5.243283 GGCATATCAGATCCTTGCAAGAAAT 59.757 40.000 28.05 19.31 35.04 2.17
2428 2506 4.581824 GGCATATCAGATCCTTGCAAGAAA 59.418 41.667 28.05 15.37 35.04 2.52
2429 2507 4.139786 GGCATATCAGATCCTTGCAAGAA 58.860 43.478 28.05 8.29 35.04 2.52
2430 2508 3.136992 TGGCATATCAGATCCTTGCAAGA 59.863 43.478 28.05 13.93 35.04 3.02
2431 2509 3.483421 TGGCATATCAGATCCTTGCAAG 58.517 45.455 19.93 19.93 35.04 4.01
2432 2510 3.581265 TGGCATATCAGATCCTTGCAA 57.419 42.857 0.00 0.00 35.04 4.08
2433 2511 3.073356 TGATGGCATATCAGATCCTTGCA 59.927 43.478 0.00 0.00 35.04 4.08
2434 2512 3.439476 GTGATGGCATATCAGATCCTTGC 59.561 47.826 0.00 4.90 0.00 4.01
2435 2513 4.648651 TGTGATGGCATATCAGATCCTTG 58.351 43.478 0.00 0.00 0.00 3.61
2436 2514 4.987963 TGTGATGGCATATCAGATCCTT 57.012 40.909 0.00 0.00 0.00 3.36
2437 2515 4.783763 AGATGTGATGGCATATCAGATCCT 59.216 41.667 24.31 15.20 44.86 3.24
2438 2516 5.100344 AGATGTGATGGCATATCAGATCC 57.900 43.478 24.31 13.90 44.86 3.36
2439 2517 8.734218 ATAAAGATGTGATGGCATATCAGATC 57.266 34.615 22.24 22.24 44.41 2.75
2440 2518 9.529823 AAATAAAGATGTGATGGCATATCAGAT 57.470 29.630 11.12 11.12 42.94 2.90
2441 2519 8.929260 AAATAAAGATGTGATGGCATATCAGA 57.071 30.769 0.00 0.00 42.94 3.27
2443 2521 9.234827 CCTAAATAAAGATGTGATGGCATATCA 57.765 33.333 0.00 3.06 42.94 2.15
2444 2522 8.186821 GCCTAAATAAAGATGTGATGGCATATC 58.813 37.037 0.00 0.00 41.41 1.63
2445 2523 7.892241 AGCCTAAATAAAGATGTGATGGCATAT 59.108 33.333 0.00 0.00 39.10 1.78
2446 2524 7.175467 CAGCCTAAATAAAGATGTGATGGCATA 59.825 37.037 0.00 0.00 39.10 3.14
2447 2525 6.015688 CAGCCTAAATAAAGATGTGATGGCAT 60.016 38.462 0.00 0.00 39.10 4.40
2448 2526 5.300034 CAGCCTAAATAAAGATGTGATGGCA 59.700 40.000 0.00 0.00 39.10 4.92
2449 2527 5.766222 CAGCCTAAATAAAGATGTGATGGC 58.234 41.667 0.00 0.00 37.15 4.40
2450 2528 5.533903 AGCAGCCTAAATAAAGATGTGATGG 59.466 40.000 0.00 0.00 0.00 3.51
2451 2529 6.039047 ACAGCAGCCTAAATAAAGATGTGATG 59.961 38.462 0.00 0.00 0.00 3.07
2452 2530 6.125029 ACAGCAGCCTAAATAAAGATGTGAT 58.875 36.000 0.00 0.00 0.00 3.06
2453 2531 5.500234 ACAGCAGCCTAAATAAAGATGTGA 58.500 37.500 0.00 0.00 0.00 3.58
2454 2532 5.824904 ACAGCAGCCTAAATAAAGATGTG 57.175 39.130 0.00 0.00 0.00 3.21
2455 2533 6.058183 CCTACAGCAGCCTAAATAAAGATGT 58.942 40.000 0.00 0.00 0.00 3.06
2456 2534 5.471456 CCCTACAGCAGCCTAAATAAAGATG 59.529 44.000 0.00 0.00 0.00 2.90
2457 2535 5.625150 CCCTACAGCAGCCTAAATAAAGAT 58.375 41.667 0.00 0.00 0.00 2.40
2458 2536 4.686122 GCCCTACAGCAGCCTAAATAAAGA 60.686 45.833 0.00 0.00 0.00 2.52
2459 2537 3.565902 GCCCTACAGCAGCCTAAATAAAG 59.434 47.826 0.00 0.00 0.00 1.85
2460 2538 3.551846 GCCCTACAGCAGCCTAAATAAA 58.448 45.455 0.00 0.00 0.00 1.40
2461 2539 2.484770 CGCCCTACAGCAGCCTAAATAA 60.485 50.000 0.00 0.00 0.00 1.40
2462 2540 1.070134 CGCCCTACAGCAGCCTAAATA 59.930 52.381 0.00 0.00 0.00 1.40
2463 2541 0.179045 CGCCCTACAGCAGCCTAAAT 60.179 55.000 0.00 0.00 0.00 1.40
2464 2542 1.220749 CGCCCTACAGCAGCCTAAA 59.779 57.895 0.00 0.00 0.00 1.85
2465 2543 1.261938 TTCGCCCTACAGCAGCCTAA 61.262 55.000 0.00 0.00 0.00 2.69
2466 2544 1.261938 TTTCGCCCTACAGCAGCCTA 61.262 55.000 0.00 0.00 0.00 3.93
2467 2545 1.915078 ATTTCGCCCTACAGCAGCCT 61.915 55.000 0.00 0.00 0.00 4.58
2468 2546 1.440145 GATTTCGCCCTACAGCAGCC 61.440 60.000 0.00 0.00 0.00 4.85
2469 2547 0.744414 TGATTTCGCCCTACAGCAGC 60.744 55.000 0.00 0.00 0.00 5.25
2470 2548 1.737838 TTGATTTCGCCCTACAGCAG 58.262 50.000 0.00 0.00 0.00 4.24
2471 2549 2.083774 CTTTGATTTCGCCCTACAGCA 58.916 47.619 0.00 0.00 0.00 4.41
2472 2550 2.084546 ACTTTGATTTCGCCCTACAGC 58.915 47.619 0.00 0.00 0.00 4.40
2473 2551 3.334691 TGACTTTGATTTCGCCCTACAG 58.665 45.455 0.00 0.00 0.00 2.74
2474 2552 3.410631 TGACTTTGATTTCGCCCTACA 57.589 42.857 0.00 0.00 0.00 2.74
2475 2553 4.965119 AATGACTTTGATTTCGCCCTAC 57.035 40.909 0.00 0.00 0.00 3.18
2476 2554 5.065988 GCTAAATGACTTTGATTTCGCCCTA 59.934 40.000 0.00 0.00 29.56 3.53
2477 2555 4.142381 GCTAAATGACTTTGATTTCGCCCT 60.142 41.667 0.00 0.00 29.56 5.19
2478 2556 4.105486 GCTAAATGACTTTGATTTCGCCC 58.895 43.478 0.00 0.00 29.56 6.13
2479 2557 4.986622 AGCTAAATGACTTTGATTTCGCC 58.013 39.130 0.00 0.00 33.92 5.54
2480 2558 8.620533 AATAAGCTAAATGACTTTGATTTCGC 57.379 30.769 0.00 0.00 33.73 4.70
2507 2585 9.196552 CGAGTCATTATACATGCTAGAATGAAA 57.803 33.333 18.17 8.71 37.04 2.69
2508 2586 8.360390 ACGAGTCATTATACATGCTAGAATGAA 58.640 33.333 18.17 1.68 37.04 2.57
2509 2587 7.809806 CACGAGTCATTATACATGCTAGAATGA 59.190 37.037 18.17 15.33 34.13 2.57
2510 2588 7.062722 CCACGAGTCATTATACATGCTAGAATG 59.937 40.741 9.36 9.36 0.00 2.67
2511 2589 7.093354 CCACGAGTCATTATACATGCTAGAAT 58.907 38.462 0.00 0.00 0.00 2.40
2512 2590 6.447162 CCACGAGTCATTATACATGCTAGAA 58.553 40.000 0.00 0.00 0.00 2.10
2513 2591 5.564848 GCCACGAGTCATTATACATGCTAGA 60.565 44.000 0.00 0.00 0.00 2.43
2514 2592 4.623167 GCCACGAGTCATTATACATGCTAG 59.377 45.833 0.00 0.00 0.00 3.42
2515 2593 4.038642 TGCCACGAGTCATTATACATGCTA 59.961 41.667 0.00 0.00 0.00 3.49
2516 2594 3.181466 TGCCACGAGTCATTATACATGCT 60.181 43.478 0.00 0.00 0.00 3.79
2517 2595 3.130633 TGCCACGAGTCATTATACATGC 58.869 45.455 0.00 0.00 0.00 4.06
2518 2596 4.990426 TGATGCCACGAGTCATTATACATG 59.010 41.667 0.00 0.00 0.00 3.21
2519 2597 5.213891 TGATGCCACGAGTCATTATACAT 57.786 39.130 0.00 0.00 0.00 2.29
2520 2598 4.099419 ACTGATGCCACGAGTCATTATACA 59.901 41.667 0.00 0.00 0.00 2.29
2521 2599 4.621991 ACTGATGCCACGAGTCATTATAC 58.378 43.478 0.00 0.00 0.00 1.47
2522 2600 4.937201 ACTGATGCCACGAGTCATTATA 57.063 40.909 0.00 0.00 0.00 0.98
2523 2601 3.827008 ACTGATGCCACGAGTCATTAT 57.173 42.857 0.00 0.00 0.00 1.28
2524 2602 3.610040 AACTGATGCCACGAGTCATTA 57.390 42.857 0.00 0.00 0.00 1.90
2525 2603 2.479566 AACTGATGCCACGAGTCATT 57.520 45.000 0.00 0.00 0.00 2.57
2526 2604 2.027745 AGAAACTGATGCCACGAGTCAT 60.028 45.455 0.00 0.00 0.00 3.06
2527 2605 1.344438 AGAAACTGATGCCACGAGTCA 59.656 47.619 0.00 0.00 0.00 3.41
2528 2606 2.086054 AGAAACTGATGCCACGAGTC 57.914 50.000 0.00 0.00 0.00 3.36
2529 2607 2.093973 CCTAGAAACTGATGCCACGAGT 60.094 50.000 0.00 0.00 0.00 4.18
2530 2608 2.544685 CCTAGAAACTGATGCCACGAG 58.455 52.381 0.00 0.00 0.00 4.18
2531 2609 1.207089 CCCTAGAAACTGATGCCACGA 59.793 52.381 0.00 0.00 0.00 4.35
2532 2610 1.656652 CCCTAGAAACTGATGCCACG 58.343 55.000 0.00 0.00 0.00 4.94
2533 2611 1.383523 GCCCTAGAAACTGATGCCAC 58.616 55.000 0.00 0.00 0.00 5.01
2534 2612 0.255890 GGCCCTAGAAACTGATGCCA 59.744 55.000 0.00 0.00 37.36 4.92
2535 2613 0.548510 AGGCCCTAGAAACTGATGCC 59.451 55.000 0.00 0.00 37.68 4.40
2536 2614 1.065126 ACAGGCCCTAGAAACTGATGC 60.065 52.381 0.00 0.00 35.08 3.91
2537 2615 3.356529 AACAGGCCCTAGAAACTGATG 57.643 47.619 0.00 0.00 35.08 3.07
2538 2616 4.783227 TCTAAACAGGCCCTAGAAACTGAT 59.217 41.667 0.00 1.02 35.08 2.90
2539 2617 4.164981 TCTAAACAGGCCCTAGAAACTGA 58.835 43.478 0.00 0.00 35.08 3.41
2540 2618 4.553330 TCTAAACAGGCCCTAGAAACTG 57.447 45.455 0.00 0.00 37.01 3.16
2541 2619 4.349930 TGTTCTAAACAGGCCCTAGAAACT 59.650 41.667 13.08 0.00 36.25 2.66
2542 2620 4.454847 GTGTTCTAAACAGGCCCTAGAAAC 59.545 45.833 13.08 10.67 43.10 2.78
2543 2621 4.103469 TGTGTTCTAAACAGGCCCTAGAAA 59.897 41.667 13.08 4.95 43.10 2.52
2544 2622 3.649023 TGTGTTCTAAACAGGCCCTAGAA 59.351 43.478 0.00 4.60 43.10 2.10
2545 2623 3.244582 TGTGTTCTAAACAGGCCCTAGA 58.755 45.455 0.00 0.00 43.10 2.43
2546 2624 3.695830 TGTGTTCTAAACAGGCCCTAG 57.304 47.619 0.00 0.00 43.10 3.02
2547 2625 3.585289 TGATGTGTTCTAAACAGGCCCTA 59.415 43.478 0.00 0.00 43.10 3.53
2548 2626 2.375174 TGATGTGTTCTAAACAGGCCCT 59.625 45.455 0.00 0.00 43.10 5.19
2549 2627 2.790433 TGATGTGTTCTAAACAGGCCC 58.210 47.619 0.00 0.00 43.10 5.80
2550 2628 4.265073 AGATGATGTGTTCTAAACAGGCC 58.735 43.478 0.00 0.00 43.10 5.19
2551 2629 4.333926 GGAGATGATGTGTTCTAAACAGGC 59.666 45.833 0.00 0.00 43.10 4.85
2552 2630 5.738909 AGGAGATGATGTGTTCTAAACAGG 58.261 41.667 0.00 0.00 43.10 4.00
2553 2631 7.678947 AAAGGAGATGATGTGTTCTAAACAG 57.321 36.000 0.00 0.00 43.10 3.16
2554 2632 8.154203 TGTAAAGGAGATGATGTGTTCTAAACA 58.846 33.333 0.00 0.00 39.52 2.83
2555 2633 8.547967 TGTAAAGGAGATGATGTGTTCTAAAC 57.452 34.615 0.00 0.00 0.00 2.01
2556 2634 9.739276 ATTGTAAAGGAGATGATGTGTTCTAAA 57.261 29.630 0.00 0.00 0.00 1.85
2557 2635 9.739276 AATTGTAAAGGAGATGATGTGTTCTAA 57.261 29.630 0.00 0.00 0.00 2.10
2558 2636 9.739276 AAATTGTAAAGGAGATGATGTGTTCTA 57.261 29.630 0.00 0.00 0.00 2.10
2559 2637 8.517878 CAAATTGTAAAGGAGATGATGTGTTCT 58.482 33.333 0.00 0.00 0.00 3.01
2560 2638 7.756722 CCAAATTGTAAAGGAGATGATGTGTTC 59.243 37.037 0.00 0.00 0.00 3.18
2561 2639 7.233348 ACCAAATTGTAAAGGAGATGATGTGTT 59.767 33.333 0.00 0.00 0.00 3.32
2562 2640 6.721208 ACCAAATTGTAAAGGAGATGATGTGT 59.279 34.615 0.00 0.00 0.00 3.72
2563 2641 7.161773 ACCAAATTGTAAAGGAGATGATGTG 57.838 36.000 0.00 0.00 0.00 3.21
2564 2642 8.906867 CATACCAAATTGTAAAGGAGATGATGT 58.093 33.333 0.00 0.00 0.00 3.06
2565 2643 7.864379 GCATACCAAATTGTAAAGGAGATGATG 59.136 37.037 0.00 0.00 0.00 3.07
2566 2644 7.781693 AGCATACCAAATTGTAAAGGAGATGAT 59.218 33.333 0.00 0.00 0.00 2.45
2567 2645 7.067372 CAGCATACCAAATTGTAAAGGAGATGA 59.933 37.037 0.00 0.00 0.00 2.92
2568 2646 7.198390 CAGCATACCAAATTGTAAAGGAGATG 58.802 38.462 0.00 0.00 0.00 2.90
2569 2647 6.183360 GCAGCATACCAAATTGTAAAGGAGAT 60.183 38.462 0.00 0.00 0.00 2.75
2570 2648 5.125417 GCAGCATACCAAATTGTAAAGGAGA 59.875 40.000 0.00 0.00 0.00 3.71
2571 2649 5.126061 AGCAGCATACCAAATTGTAAAGGAG 59.874 40.000 0.00 0.00 0.00 3.69
2572 2650 5.016173 AGCAGCATACCAAATTGTAAAGGA 58.984 37.500 0.00 0.00 0.00 3.36
2573 2651 5.329035 AGCAGCATACCAAATTGTAAAGG 57.671 39.130 0.00 0.00 0.00 3.11
2574 2652 7.761409 TCTTAGCAGCATACCAAATTGTAAAG 58.239 34.615 0.00 0.00 0.00 1.85
2575 2653 7.393234 ACTCTTAGCAGCATACCAAATTGTAAA 59.607 33.333 0.00 0.00 0.00 2.01
2576 2654 6.884295 ACTCTTAGCAGCATACCAAATTGTAA 59.116 34.615 0.00 0.00 0.00 2.41
2577 2655 6.414732 ACTCTTAGCAGCATACCAAATTGTA 58.585 36.000 0.00 0.00 0.00 2.41
2578 2656 5.256474 ACTCTTAGCAGCATACCAAATTGT 58.744 37.500 0.00 0.00 0.00 2.71
2579 2657 5.824904 ACTCTTAGCAGCATACCAAATTG 57.175 39.130 0.00 0.00 0.00 2.32
2580 2658 7.338710 TCTTACTCTTAGCAGCATACCAAATT 58.661 34.615 0.00 0.00 0.00 1.82
2581 2659 6.889198 TCTTACTCTTAGCAGCATACCAAAT 58.111 36.000 0.00 0.00 0.00 2.32
2582 2660 6.070767 ACTCTTACTCTTAGCAGCATACCAAA 60.071 38.462 0.00 0.00 0.00 3.28
2583 2661 5.422331 ACTCTTACTCTTAGCAGCATACCAA 59.578 40.000 0.00 0.00 0.00 3.67
2584 2662 4.956700 ACTCTTACTCTTAGCAGCATACCA 59.043 41.667 0.00 0.00 0.00 3.25
2585 2663 5.285651 CACTCTTACTCTTAGCAGCATACC 58.714 45.833 0.00 0.00 0.00 2.73
2586 2664 4.742659 GCACTCTTACTCTTAGCAGCATAC 59.257 45.833 0.00 0.00 0.00 2.39
2587 2665 4.646945 AGCACTCTTACTCTTAGCAGCATA 59.353 41.667 0.00 0.00 0.00 3.14
2588 2666 3.450457 AGCACTCTTACTCTTAGCAGCAT 59.550 43.478 0.00 0.00 0.00 3.79
2589 2667 2.828520 AGCACTCTTACTCTTAGCAGCA 59.171 45.455 0.00 0.00 0.00 4.41
2590 2668 3.518634 AGCACTCTTACTCTTAGCAGC 57.481 47.619 0.00 0.00 0.00 5.25
2591 2669 4.399618 TGGTAGCACTCTTACTCTTAGCAG 59.600 45.833 0.00 0.00 0.00 4.24
2592 2670 4.341487 TGGTAGCACTCTTACTCTTAGCA 58.659 43.478 0.00 0.00 0.00 3.49
2593 2671 4.985538 TGGTAGCACTCTTACTCTTAGC 57.014 45.455 0.00 0.00 0.00 3.09
2594 2672 6.952773 AGATGGTAGCACTCTTACTCTTAG 57.047 41.667 0.00 0.00 0.00 2.18
2595 2673 8.818622 TTTAGATGGTAGCACTCTTACTCTTA 57.181 34.615 0.00 0.00 0.00 2.10
2596 2674 7.719871 TTTAGATGGTAGCACTCTTACTCTT 57.280 36.000 0.00 0.00 0.00 2.85
2597 2675 7.397761 ACTTTTAGATGGTAGCACTCTTACTCT 59.602 37.037 0.00 0.00 0.00 3.24
2598 2676 7.548967 ACTTTTAGATGGTAGCACTCTTACTC 58.451 38.462 0.00 0.00 0.00 2.59
2599 2677 7.483580 ACTTTTAGATGGTAGCACTCTTACT 57.516 36.000 0.00 0.00 0.00 2.24
2600 2678 8.684520 TCTACTTTTAGATGGTAGCACTCTTAC 58.315 37.037 0.00 0.00 34.62 2.34
2601 2679 8.684520 GTCTACTTTTAGATGGTAGCACTCTTA 58.315 37.037 0.00 0.00 36.69 2.10
2602 2680 7.397761 AGTCTACTTTTAGATGGTAGCACTCTT 59.602 37.037 0.00 0.00 36.69 2.85
2603 2681 6.893005 AGTCTACTTTTAGATGGTAGCACTCT 59.107 38.462 0.00 4.56 36.69 3.24
2604 2682 7.102847 AGTCTACTTTTAGATGGTAGCACTC 57.897 40.000 0.00 0.00 36.69 3.51
2605 2683 8.591114 TTAGTCTACTTTTAGATGGTAGCACT 57.409 34.615 0.00 0.00 36.69 4.40
2606 2684 8.684520 TCTTAGTCTACTTTTAGATGGTAGCAC 58.315 37.037 0.00 0.00 36.69 4.40
2607 2685 8.818622 TCTTAGTCTACTTTTAGATGGTAGCA 57.181 34.615 0.00 0.00 36.69 3.49
2608 2686 8.905850 ACTCTTAGTCTACTTTTAGATGGTAGC 58.094 37.037 0.00 0.00 36.69 3.58
2610 2688 8.684520 GCACTCTTAGTCTACTTTTAGATGGTA 58.315 37.037 0.00 0.00 36.69 3.25
2611 2689 7.397761 AGCACTCTTAGTCTACTTTTAGATGGT 59.602 37.037 0.00 0.00 36.69 3.55
2612 2690 7.777095 AGCACTCTTAGTCTACTTTTAGATGG 58.223 38.462 0.00 0.00 36.69 3.51
2613 2691 9.724839 GTAGCACTCTTAGTCTACTTTTAGATG 57.275 37.037 0.00 0.00 36.69 2.90
2614 2692 9.689501 AGTAGCACTCTTAGTCTACTTTTAGAT 57.310 33.333 10.67 0.00 36.61 1.98
2617 2695 9.956640 ACTAGTAGCACTCTTAGTCTACTTTTA 57.043 33.333 16.85 6.25 38.66 1.52
2618 2696 8.866970 ACTAGTAGCACTCTTAGTCTACTTTT 57.133 34.615 16.85 8.05 38.66 2.27
2619 2697 8.866970 AACTAGTAGCACTCTTAGTCTACTTT 57.133 34.615 16.85 9.15 38.66 2.66
2620 2698 8.866970 AAACTAGTAGCACTCTTAGTCTACTT 57.133 34.615 16.85 5.53 38.66 2.24
2621 2699 8.866970 AAAACTAGTAGCACTCTTAGTCTACT 57.133 34.615 16.32 16.32 39.78 2.57
2624 2702 9.911138 GTTTAAAACTAGTAGCACTCTTAGTCT 57.089 33.333 0.00 0.00 0.00 3.24
2625 2703 9.688592 TGTTTAAAACTAGTAGCACTCTTAGTC 57.311 33.333 0.00 0.00 0.00 2.59
2629 2707 9.780186 ATCTTGTTTAAAACTAGTAGCACTCTT 57.220 29.630 0.00 0.00 36.00 2.85
2630 2708 9.780186 AATCTTGTTTAAAACTAGTAGCACTCT 57.220 29.630 0.00 0.00 36.00 3.24
2647 2725 9.515226 TCTGTAACAGCCTTTATAATCTTGTTT 57.485 29.630 9.14 0.00 0.00 2.83
2648 2726 9.167311 CTCTGTAACAGCCTTTATAATCTTGTT 57.833 33.333 0.00 8.95 0.00 2.83
2649 2727 8.322091 ACTCTGTAACAGCCTTTATAATCTTGT 58.678 33.333 0.00 0.00 0.00 3.16
2650 2728 8.723942 ACTCTGTAACAGCCTTTATAATCTTG 57.276 34.615 0.00 0.00 0.00 3.02
2651 2729 9.819267 GTACTCTGTAACAGCCTTTATAATCTT 57.181 33.333 0.00 0.00 0.00 2.40
2652 2730 8.978472 TGTACTCTGTAACAGCCTTTATAATCT 58.022 33.333 0.00 0.00 0.00 2.40
2653 2731 9.032420 GTGTACTCTGTAACAGCCTTTATAATC 57.968 37.037 0.00 0.00 0.00 1.75
2654 2732 8.537016 TGTGTACTCTGTAACAGCCTTTATAAT 58.463 33.333 0.00 0.00 0.00 1.28
2655 2733 7.816031 GTGTGTACTCTGTAACAGCCTTTATAA 59.184 37.037 0.00 0.00 0.00 0.98
2656 2734 7.318141 GTGTGTACTCTGTAACAGCCTTTATA 58.682 38.462 0.00 0.00 0.00 0.98
2657 2735 6.164176 GTGTGTACTCTGTAACAGCCTTTAT 58.836 40.000 0.00 0.00 0.00 1.40
2658 2736 5.510179 GGTGTGTACTCTGTAACAGCCTTTA 60.510 44.000 0.00 0.00 35.53 1.85
2659 2737 4.377897 GTGTGTACTCTGTAACAGCCTTT 58.622 43.478 0.00 0.00 0.00 3.11
2660 2738 3.244112 GGTGTGTACTCTGTAACAGCCTT 60.244 47.826 0.00 0.00 35.53 4.35
2661 2739 2.299297 GGTGTGTACTCTGTAACAGCCT 59.701 50.000 0.00 0.00 35.53 4.58
2662 2740 2.036733 TGGTGTGTACTCTGTAACAGCC 59.963 50.000 8.06 2.58 39.64 4.85
2663 2741 3.057734 GTGGTGTGTACTCTGTAACAGC 58.942 50.000 4.51 4.51 40.52 4.40
2664 2742 4.547532 GAGTGGTGTGTACTCTGTAACAG 58.452 47.826 0.00 0.00 41.00 3.16
2665 2743 4.579454 GAGTGGTGTGTACTCTGTAACA 57.421 45.455 0.00 0.00 41.00 2.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.