Multiple sequence alignment - TraesCS3B01G129800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G129800 chr3B 100.000 4922 0 0 1 4922 111851265 111856186 0.000000e+00 9090.0
1 TraesCS3B01G129800 chr3B 100.000 522 0 0 5210 5731 111856474 111856995 0.000000e+00 965.0
2 TraesCS3B01G129800 chr3B 93.617 94 6 0 4082 4175 111855439 111855346 2.150000e-29 141.0
3 TraesCS3B01G129800 chr3B 89.720 107 8 2 2608 2711 125865141 125865035 3.600000e-27 134.0
4 TraesCS3B01G129800 chr3D 96.056 2282 71 12 1834 4102 67062530 67064805 0.000000e+00 3698.0
5 TraesCS3B01G129800 chr3D 92.471 1275 57 20 572 1830 67061138 67062389 0.000000e+00 1786.0
6 TraesCS3B01G129800 chr3D 94.987 758 27 9 4155 4907 67064891 67065642 0.000000e+00 1179.0
7 TraesCS3B01G129800 chr3D 80.075 532 66 17 18 525 67054770 67055285 5.460000e-95 359.0
8 TraesCS3B01G129800 chr3D 88.235 102 10 1 2612 2711 79555904 79555803 2.800000e-23 121.0
9 TraesCS3B01G129800 chr3A 93.309 1674 94 12 2419 4083 78190808 78192472 0.000000e+00 2455.0
10 TraesCS3B01G129800 chr3A 93.787 1014 35 13 817 1818 78189177 78190174 0.000000e+00 1498.0
11 TraesCS3B01G129800 chr3A 94.555 753 33 7 4172 4922 78192469 78193215 0.000000e+00 1157.0
12 TraesCS3B01G129800 chr3A 90.625 576 35 13 1850 2422 78190169 78190728 0.000000e+00 747.0
13 TraesCS3B01G129800 chr3A 82.013 745 75 31 2 710 78188173 78188894 3.850000e-161 579.0
14 TraesCS3B01G129800 chr3A 82.816 419 42 23 2310 2711 93572578 93572173 1.180000e-91 348.0
15 TraesCS3B01G129800 chr1D 91.089 101 6 2 4078 4175 275529301 275529201 3.600000e-27 134.0
16 TraesCS3B01G129800 chr1D 93.333 60 4 0 5573 5632 370311646 370311587 7.910000e-14 89.8
17 TraesCS3B01G129800 chr1D 76.429 140 29 4 149 286 482932610 482932473 7.970000e-09 73.1
18 TraesCS3B01G129800 chr5B 90.291 103 7 2 4080 4179 625959560 625959458 1.300000e-26 132.0
19 TraesCS3B01G129800 chr5B 90.000 60 6 0 5573 5632 216845467 216845526 1.710000e-10 78.7
20 TraesCS3B01G129800 chr7B 89.524 105 7 4 4074 4175 198885105 198885208 4.660000e-26 130.0
21 TraesCS3B01G129800 chr6A 88.991 109 7 4 4071 4175 325903494 325903601 4.660000e-26 130.0
22 TraesCS3B01G129800 chr6A 90.000 60 6 0 5573 5632 615888547 615888606 1.710000e-10 78.7
23 TraesCS3B01G129800 chr6D 88.182 110 9 3 4070 4176 53670191 53670083 1.680000e-25 128.0
24 TraesCS3B01G129800 chr6D 87.500 112 10 4 4066 4175 437955944 437956053 6.030000e-25 126.0
25 TraesCS3B01G129800 chr6D 90.000 60 6 0 5573 5632 471069861 471069920 1.710000e-10 78.7
26 TraesCS3B01G129800 chr6D 86.957 69 7 2 2234 2301 291148589 291148522 6.160000e-10 76.8
27 TraesCS3B01G129800 chr1B 89.423 104 7 4 4079 4179 600973521 600973419 1.680000e-25 128.0
28 TraesCS3B01G129800 chr1B 91.667 60 5 0 5573 5632 493659479 493659420 3.680000e-12 84.2
29 TraesCS3B01G129800 chr2A 86.842 114 11 3 4075 4184 27741250 27741363 2.170000e-24 124.0
30 TraesCS3B01G129800 chr2A 82.500 120 15 6 5447 5566 213482786 213482899 3.650000e-17 100.0
31 TraesCS3B01G129800 chr2A 89.231 65 6 1 5573 5636 632931771 632931707 4.760000e-11 80.5
32 TraesCS3B01G129800 chr4A 80.986 142 21 6 5425 5566 300275760 300275895 2.180000e-19 108.0
33 TraesCS3B01G129800 chr2D 80.282 142 22 6 5425 5566 140368696 140368831 1.020000e-17 102.0
34 TraesCS3B01G129800 chr2D 79.167 144 22 8 5424 5566 143442182 143442046 6.110000e-15 93.5
35 TraesCS3B01G129800 chr2D 79.021 143 22 8 5425 5566 502288526 502288391 2.200000e-14 91.6
36 TraesCS3B01G129800 chr7A 79.720 143 20 9 5425 5566 368197342 368197208 1.700000e-15 95.3
37 TraesCS3B01G129800 chr7A 84.932 73 9 2 5566 5636 85604220 85604148 7.970000e-09 73.1
38 TraesCS3B01G129800 chr5D 79.021 143 22 8 5425 5566 162582471 162582336 2.200000e-14 91.6
39 TraesCS3B01G129800 chr7D 80.833 120 17 6 5447 5566 381669694 381669581 7.910000e-14 89.8
40 TraesCS3B01G129800 chr7D 90.000 60 6 0 5573 5632 167548353 167548412 1.710000e-10 78.7
41 TraesCS3B01G129800 chr4D 78.169 142 22 9 5423 5560 77420411 77420275 1.320000e-11 82.4
42 TraesCS3B01G129800 chr1A 89.231 65 6 1 5573 5636 42512624 42512560 4.760000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G129800 chr3B 111851265 111856995 5730 False 5027.5 9090 100.000000 1 5731 2 chr3B.!!$F1 5730
1 TraesCS3B01G129800 chr3D 67061138 67065642 4504 False 2221.0 3698 94.504667 572 4907 3 chr3D.!!$F2 4335
2 TraesCS3B01G129800 chr3D 67054770 67055285 515 False 359.0 359 80.075000 18 525 1 chr3D.!!$F1 507
3 TraesCS3B01G129800 chr3A 78188173 78193215 5042 False 1287.2 2455 90.857800 2 4922 5 chr3A.!!$F1 4920

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
661 698 0.677288 CCGCCCATCAATCATTGCAT 59.323 50.0 0.00 0.0 0.00 3.96 F
1689 1921 0.320771 CACTGCTCTACCGTGCCTTT 60.321 55.0 0.00 0.0 0.00 3.11 F
2277 2647 0.960364 ATACCGGGCAGCACACAAAG 60.960 55.0 6.32 0.0 0.00 2.77 F
3616 4083 0.542467 AATGCAAGGTGGTGCCATCA 60.542 50.0 4.13 0.0 44.26 3.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2190 2560 0.998928 TCAATCCAAGCAGGGCCTTA 59.001 50.0 1.32 0.0 38.24 2.69 R
3593 4060 0.965439 GGCACCACCTTGCATTGTTA 59.035 50.0 0.00 0.0 44.94 2.41 R
4079 4550 0.115745 TTTGGGACGGAGGGAGTACT 59.884 55.0 0.00 0.0 0.00 2.73 R
5422 6023 0.042131 ACCGGAATGGAGGGAGTACA 59.958 55.0 9.46 0.0 42.00 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
113 114 7.750903 GGACTTCACTACAAATTTGATGTAAGC 59.249 37.037 24.64 14.08 33.17 3.09
163 165 2.867456 AAGACAAATTACGTTCGCCG 57.133 45.000 0.00 0.00 44.03 6.46
177 179 1.651987 TCGCCGAGGATGACAAATTC 58.348 50.000 0.00 0.00 0.00 2.17
182 184 3.938963 GCCGAGGATGACAAATTCAGTTA 59.061 43.478 0.00 0.00 37.77 2.24
195 197 1.438651 TCAGTTAACGAGCATGGCAC 58.561 50.000 0.00 0.00 0.00 5.01
212 214 5.387113 TGGCACATTCACCCTAGATTATT 57.613 39.130 0.00 0.00 0.00 1.40
259 261 6.494893 TTGCTAACTAAATTTGCGATCACT 57.505 33.333 0.00 0.00 41.39 3.41
262 264 4.764679 AACTAAATTTGCGATCACTGCA 57.235 36.364 0.00 0.00 41.38 4.41
270 272 1.941975 TGCGATCACTGCACCAATATG 59.058 47.619 0.00 0.00 37.44 1.78
278 280 2.431782 ACTGCACCAATATGAATTGCCC 59.568 45.455 0.00 0.00 41.06 5.36
280 282 3.890756 CTGCACCAATATGAATTGCCCTA 59.109 43.478 0.00 0.00 41.06 3.53
330 334 0.872388 CCGCGTCAGGTTTTTAGCTT 59.128 50.000 4.92 0.00 0.00 3.74
334 338 3.305964 GCGTCAGGTTTTTAGCTTTTCC 58.694 45.455 0.00 0.00 0.00 3.13
379 383 3.853831 TCATAGTGCATTTGTTGGCTG 57.146 42.857 0.00 0.00 0.00 4.85
380 384 2.492881 TCATAGTGCATTTGTTGGCTGG 59.507 45.455 0.00 0.00 0.00 4.85
381 385 1.255882 TAGTGCATTTGTTGGCTGGG 58.744 50.000 0.00 0.00 0.00 4.45
382 386 1.004679 GTGCATTTGTTGGCTGGGG 60.005 57.895 0.00 0.00 0.00 4.96
383 387 2.215625 TGCATTTGTTGGCTGGGGG 61.216 57.895 0.00 0.00 0.00 5.40
388 392 2.157640 TTTGTTGGCTGGGGGATATG 57.842 50.000 0.00 0.00 0.00 1.78
480 505 7.955918 AGACAAAAGCAAAAATCCAACTAGAT 58.044 30.769 0.00 0.00 0.00 1.98
534 559 7.750947 AACCCCAAAATAGTATGAGTAGAGT 57.249 36.000 0.00 0.00 0.00 3.24
553 578 6.667558 AGAGTTTATATTTAGGGACGGAGG 57.332 41.667 0.00 0.00 0.00 4.30
634 671 2.426023 GCCCGCGTTATCCATCCT 59.574 61.111 4.92 0.00 0.00 3.24
661 698 0.677288 CCGCCCATCAATCATTGCAT 59.323 50.000 0.00 0.00 0.00 3.96
662 699 1.069513 CCGCCCATCAATCATTGCATT 59.930 47.619 0.00 0.00 0.00 3.56
663 700 2.131972 CGCCCATCAATCATTGCATTG 58.868 47.619 2.08 2.08 35.39 2.82
664 701 1.871039 GCCCATCAATCATTGCATTGC 59.129 47.619 0.46 0.46 34.26 3.56
665 702 2.743510 GCCCATCAATCATTGCATTGCA 60.744 45.455 7.38 7.38 34.26 4.08
716 753 2.124403 TCTCCCTCGTACCCGCTC 60.124 66.667 0.00 0.00 0.00 5.03
717 754 2.124236 CTCCCTCGTACCCGCTCT 60.124 66.667 0.00 0.00 0.00 4.09
722 759 4.051167 TCGTACCCGCTCTCCCCA 62.051 66.667 0.00 0.00 0.00 4.96
729 766 1.672356 CCGCTCTCCCCACACAAAG 60.672 63.158 0.00 0.00 0.00 2.77
733 770 0.689623 CTCTCCCCACACAAAGCTCT 59.310 55.000 0.00 0.00 0.00 4.09
858 1078 2.391389 CCCGAGCAGAGCCGAAAAC 61.391 63.158 0.00 0.00 0.00 2.43
869 1089 0.933047 GCCGAAAACGCCAAACAGAC 60.933 55.000 0.00 0.00 0.00 3.51
873 1093 1.133407 GAAAACGCCAAACAGACCACA 59.867 47.619 0.00 0.00 0.00 4.17
933 1154 1.134551 GCGCAGATCTTTTCTCCTCCT 60.135 52.381 0.30 0.00 29.93 3.69
987 1212 2.434774 GCGTCCTTCCCCCACTTT 59.565 61.111 0.00 0.00 0.00 2.66
1553 1784 2.736721 AGTTCGATTGGACGTGTTCATG 59.263 45.455 0.00 0.00 34.70 3.07
1606 1837 7.254227 TGGGAGTAATAAATTGCACGATAAC 57.746 36.000 0.00 0.00 0.00 1.89
1657 1889 2.627945 TGCCCGTGAGATCATTTACAC 58.372 47.619 0.00 0.00 0.00 2.90
1689 1921 0.320771 CACTGCTCTACCGTGCCTTT 60.321 55.000 0.00 0.00 0.00 3.11
1719 1951 8.547894 TGAAATGTATGCTGTAAACACGATATC 58.452 33.333 0.00 0.00 0.00 1.63
1796 2028 4.834534 TGGTATGGTAATTACAGTTGCGT 58.165 39.130 17.16 3.77 0.00 5.24
1812 2044 4.024048 AGTTGCGTTGGTTGTCTTATTCTG 60.024 41.667 0.00 0.00 0.00 3.02
1822 2054 7.861629 TGGTTGTCTTATTCTGAAGTATGGAT 58.138 34.615 0.00 0.00 0.00 3.41
1861 2230 9.019656 ACTAGGTGATAATATAAGAGTGCTCAG 57.980 37.037 1.82 0.00 0.00 3.35
1871 2240 2.969628 AGAGTGCTCAGTATATGGCCT 58.030 47.619 3.32 0.00 0.00 5.19
2180 2550 5.585047 GCTTTTGTAGGTCCAGATTAACGAT 59.415 40.000 0.00 0.00 0.00 3.73
2190 2560 2.119495 AGATTAACGATGGGGCAGACT 58.881 47.619 0.00 0.00 0.00 3.24
2277 2647 0.960364 ATACCGGGCAGCACACAAAG 60.960 55.000 6.32 0.00 0.00 2.77
2482 2936 8.723942 TCTCTTAATGAAGATTCAGTTTAGGC 57.276 34.615 0.42 0.00 40.95 3.93
2497 2951 1.669604 TAGGCAGCGAAACAACACAA 58.330 45.000 0.00 0.00 0.00 3.33
2503 2957 3.854809 GCAGCGAAACAACACAACTTAAA 59.145 39.130 0.00 0.00 0.00 1.52
2504 2958 4.324936 GCAGCGAAACAACACAACTTAAAA 59.675 37.500 0.00 0.00 0.00 1.52
2556 3010 6.665992 AATACTGTCAGGTTAGTTCAGTGA 57.334 37.500 4.53 0.00 39.27 3.41
2659 3117 7.851387 TGTTTTTCTCCCCACAAAATTAAAC 57.149 32.000 0.00 0.00 0.00 2.01
2660 3118 7.394816 TGTTTTTCTCCCCACAAAATTAAACA 58.605 30.769 0.00 0.00 31.62 2.83
2733 3191 2.596851 GCTGGAGGCTGAGGAACCA 61.597 63.158 0.00 0.00 38.06 3.67
2747 3205 1.336125 GGAACCACGTATAGCTAGCGT 59.664 52.381 17.04 17.04 39.59 5.07
2784 3242 2.034558 GGCTCTAAGCACAGCAAACAAA 59.965 45.455 0.86 0.00 44.75 2.83
2958 3419 9.469807 TGCATATTCTTCGTTTGTTTAATTGTT 57.530 25.926 0.00 0.00 0.00 2.83
3164 3630 7.324178 ACCAGAGTATGTGTTCTATGAACTTC 58.676 38.462 11.06 5.89 0.00 3.01
3199 3665 7.838079 TCCATTGATTGTAATAAGGGGAATG 57.162 36.000 0.00 0.00 0.00 2.67
3231 3697 9.394767 TGTGCAACTGTTTATGATCAGTATTAT 57.605 29.630 0.09 0.00 42.95 1.28
3404 3870 9.132521 GAATTTCCACATGTTCTTGAGTTAATG 57.867 33.333 0.00 0.00 0.00 1.90
3593 4060 6.597672 TGCAACTACCGTCTAAAATGATGATT 59.402 34.615 0.00 0.00 0.00 2.57
3616 4083 0.542467 AATGCAAGGTGGTGCCATCA 60.542 50.000 4.13 0.00 44.26 3.07
3761 4232 5.754782 TGATAATGTGGGCACAGATTAACT 58.245 37.500 21.06 7.12 43.41 2.24
3915 4386 2.151307 TAGAGGAGGTGCGGACCAGT 62.151 60.000 28.90 11.83 45.98 4.00
4004 4475 9.708092 TTGAAATTGAATGCACAGATAAATCAA 57.292 25.926 0.00 0.00 0.00 2.57
4079 4550 6.645705 CGCATTCGCACAATATCTTAAGTTA 58.354 36.000 1.63 0.00 38.40 2.24
4080 4551 6.787515 CGCATTCGCACAATATCTTAAGTTAG 59.212 38.462 1.63 0.00 38.40 2.34
4081 4552 7.516785 CGCATTCGCACAATATCTTAAGTTAGT 60.517 37.037 1.63 0.00 38.40 2.24
4082 4553 8.761497 GCATTCGCACAATATCTTAAGTTAGTA 58.239 33.333 1.63 0.00 38.36 1.82
4085 4556 9.512435 TTCGCACAATATCTTAAGTTAGTACTC 57.488 33.333 0.00 0.00 31.99 2.59
4086 4557 8.133627 TCGCACAATATCTTAAGTTAGTACTCC 58.866 37.037 0.00 0.00 31.99 3.85
4087 4558 7.381678 CGCACAATATCTTAAGTTAGTACTCCC 59.618 40.741 0.00 0.00 31.99 4.30
4088 4559 8.422566 GCACAATATCTTAAGTTAGTACTCCCT 58.577 37.037 0.00 0.00 31.99 4.20
4089 4560 9.968870 CACAATATCTTAAGTTAGTACTCCCTC 57.031 37.037 0.00 0.00 31.99 4.30
4090 4561 9.145442 ACAATATCTTAAGTTAGTACTCCCTCC 57.855 37.037 0.00 0.00 31.99 4.30
4091 4562 7.999450 ATATCTTAAGTTAGTACTCCCTCCG 57.001 40.000 0.00 0.00 31.99 4.63
4092 4563 5.184892 TCTTAAGTTAGTACTCCCTCCGT 57.815 43.478 0.00 0.00 31.99 4.69
4093 4564 5.189180 TCTTAAGTTAGTACTCCCTCCGTC 58.811 45.833 0.00 0.00 31.99 4.79
4094 4565 2.433662 AGTTAGTACTCCCTCCGTCC 57.566 55.000 0.00 0.00 0.00 4.79
4095 4566 1.064091 AGTTAGTACTCCCTCCGTCCC 60.064 57.143 0.00 0.00 0.00 4.46
4096 4567 1.002069 TTAGTACTCCCTCCGTCCCA 58.998 55.000 0.00 0.00 0.00 4.37
4097 4568 1.002069 TAGTACTCCCTCCGTCCCAA 58.998 55.000 0.00 0.00 0.00 4.12
4098 4569 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
4099 4570 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
4100 4571 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
4101 4572 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
4102 4573 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
4103 4574 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
4104 4575 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
4105 4576 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
4106 4577 2.026636 CCCTCCGTCCCAAAATAAGTGA 60.027 50.000 0.00 0.00 0.00 3.41
4107 4578 3.007635 CCTCCGTCCCAAAATAAGTGAC 58.992 50.000 0.00 0.00 0.00 3.67
4108 4579 3.307480 CCTCCGTCCCAAAATAAGTGACT 60.307 47.826 0.00 0.00 0.00 3.41
4109 4580 3.933332 CTCCGTCCCAAAATAAGTGACTC 59.067 47.826 0.00 0.00 0.00 3.36
4110 4581 3.325425 TCCGTCCCAAAATAAGTGACTCA 59.675 43.478 0.00 0.00 0.00 3.41
4111 4582 4.069304 CCGTCCCAAAATAAGTGACTCAA 58.931 43.478 0.00 0.00 0.00 3.02
4112 4583 4.517453 CCGTCCCAAAATAAGTGACTCAAA 59.483 41.667 0.00 0.00 0.00 2.69
4113 4584 5.449304 CGTCCCAAAATAAGTGACTCAAAC 58.551 41.667 0.00 0.00 0.00 2.93
4114 4585 5.238650 CGTCCCAAAATAAGTGACTCAAACT 59.761 40.000 0.00 0.00 0.00 2.66
4115 4586 6.238648 CGTCCCAAAATAAGTGACTCAAACTT 60.239 38.462 0.00 0.00 40.82 2.66
4116 4587 6.918022 GTCCCAAAATAAGTGACTCAAACTTG 59.082 38.462 0.00 0.00 38.32 3.16
4117 4588 6.605594 TCCCAAAATAAGTGACTCAAACTTGT 59.394 34.615 0.00 0.00 38.32 3.16
4118 4589 7.776030 TCCCAAAATAAGTGACTCAAACTTGTA 59.224 33.333 0.00 0.00 38.32 2.41
4119 4590 7.860872 CCCAAAATAAGTGACTCAAACTTGTAC 59.139 37.037 0.00 0.00 38.32 2.90
4120 4591 8.621286 CCAAAATAAGTGACTCAAACTTGTACT 58.379 33.333 0.00 0.00 38.32 2.73
4126 4597 8.788325 AAGTGACTCAAACTTGTACTAACTTT 57.212 30.769 0.00 0.00 36.52 2.66
4127 4598 8.197988 AGTGACTCAAACTTGTACTAACTTTG 57.802 34.615 0.00 0.00 0.00 2.77
4128 4599 7.822822 AGTGACTCAAACTTGTACTAACTTTGT 59.177 33.333 0.00 0.00 0.00 2.83
4129 4600 9.090692 GTGACTCAAACTTGTACTAACTTTGTA 57.909 33.333 0.00 0.00 0.00 2.41
4130 4601 9.656040 TGACTCAAACTTGTACTAACTTTGTAA 57.344 29.630 0.00 0.00 0.00 2.41
4151 4622 8.780846 TGTAAAGTTAGAACAAGTTTGAGTCA 57.219 30.769 0.00 0.00 0.00 3.41
4152 4623 8.662141 TGTAAAGTTAGAACAAGTTTGAGTCAC 58.338 33.333 0.00 0.00 0.00 3.67
4153 4624 7.923414 AAAGTTAGAACAAGTTTGAGTCACT 57.077 32.000 0.00 0.00 0.00 3.41
4154 4625 7.923414 AAGTTAGAACAAGTTTGAGTCACTT 57.077 32.000 0.00 0.00 34.67 3.16
4155 4626 9.444600 AAAGTTAGAACAAGTTTGAGTCACTTA 57.555 29.630 0.00 0.00 32.48 2.24
4156 4627 9.614792 AAGTTAGAACAAGTTTGAGTCACTTAT 57.385 29.630 0.00 0.00 32.48 1.73
4157 4628 9.614792 AGTTAGAACAAGTTTGAGTCACTTATT 57.385 29.630 0.00 0.00 32.48 1.40
4161 4632 8.190784 AGAACAAGTTTGAGTCACTTATTTTGG 58.809 33.333 0.00 0.00 32.48 3.28
4162 4633 6.805713 ACAAGTTTGAGTCACTTATTTTGGG 58.194 36.000 0.00 0.00 32.48 4.12
4163 4634 6.605594 ACAAGTTTGAGTCACTTATTTTGGGA 59.394 34.615 0.00 0.00 32.48 4.37
4164 4635 6.635030 AGTTTGAGTCACTTATTTTGGGAC 57.365 37.500 0.00 0.00 0.00 4.46
4165 4636 5.238650 AGTTTGAGTCACTTATTTTGGGACG 59.761 40.000 0.00 0.00 33.84 4.79
4166 4637 3.670625 TGAGTCACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 33.84 4.79
4167 4638 3.325425 TGAGTCACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 33.84 4.69
4168 4639 3.671716 AGTCACTTATTTTGGGACGGAC 58.328 45.455 0.00 0.00 33.84 4.79
4169 4640 2.414138 GTCACTTATTTTGGGACGGACG 59.586 50.000 0.00 0.00 0.00 4.79
4170 4641 1.735571 CACTTATTTTGGGACGGACGG 59.264 52.381 0.00 0.00 0.00 4.79
4205 4804 5.178067 AGGTTCGGATTACGTAAACAACTTG 59.822 40.000 12.81 0.00 44.69 3.16
4439 5038 7.099764 TGTAGCAAGCCTATATTATCTGCTTC 58.900 38.462 8.76 0.00 40.08 3.86
4466 5066 6.317893 TGTTCTTCTAACCTTTCAAGTGGAAC 59.682 38.462 0.00 0.00 34.56 3.62
4478 5078 7.382218 CCTTTCAAGTGGAACATATTCACAAAC 59.618 37.037 0.00 0.00 44.52 2.93
4481 5081 8.322906 TCAAGTGGAACATATTCACAAACTAG 57.677 34.615 0.00 0.00 44.52 2.57
4502 5102 5.324832 AGGGGATTCTTGTTCTTTTGAGA 57.675 39.130 0.00 0.00 0.00 3.27
4721 5322 0.976641 CAGGTAGCCTGTTGAGACCA 59.023 55.000 6.99 0.00 45.82 4.02
4739 5340 2.758423 ACCATCCCAATAGCGTTTTTCC 59.242 45.455 0.00 0.00 0.00 3.13
4761 5362 4.976116 CCGGTTTCTTTCTGATTTTGTGTC 59.024 41.667 0.00 0.00 0.00 3.67
4838 5439 2.948979 GTGCATATCACGGGAAAATGGA 59.051 45.455 13.46 8.98 35.76 3.41
4839 5440 3.003689 GTGCATATCACGGGAAAATGGAG 59.996 47.826 13.46 0.00 35.76 3.86
4855 5456 7.201911 GGAAAATGGAGGGTAAATACATGAAGG 60.202 40.741 0.00 0.00 0.00 3.46
4898 5499 7.872483 ACTACGCAAAATGAAGGAAAATTGATT 59.128 29.630 0.00 0.00 0.00 2.57
4910 5511 1.459972 AATTGATTGGGGGTGGGGGT 61.460 55.000 0.00 0.00 0.00 4.95
4911 5512 2.180190 ATTGATTGGGGGTGGGGGTG 62.180 60.000 0.00 0.00 0.00 4.61
4913 5514 4.980476 ATTGGGGGTGGGGGTGGT 62.980 66.667 0.00 0.00 0.00 4.16
4914 5515 3.542147 ATTGGGGGTGGGGGTGGTA 62.542 63.158 0.00 0.00 0.00 3.25
4916 5517 2.619159 GGGGGTGGGGGTGGTAAT 60.619 66.667 0.00 0.00 0.00 1.89
4917 5518 1.308924 GGGGGTGGGGGTGGTAATA 60.309 63.158 0.00 0.00 0.00 0.98
4918 5519 1.358051 GGGGGTGGGGGTGGTAATAG 61.358 65.000 0.00 0.00 0.00 1.73
4919 5520 0.625387 GGGGTGGGGGTGGTAATAGT 60.625 60.000 0.00 0.00 0.00 2.12
4921 5522 1.213678 GGGTGGGGGTGGTAATAGTTC 59.786 57.143 0.00 0.00 0.00 3.01
5233 5834 6.988622 ATAATGCAAAACATGGTCCATTTG 57.011 33.333 0.00 6.84 39.60 2.32
5234 5835 4.620589 ATGCAAAACATGGTCCATTTGA 57.379 36.364 17.10 6.05 37.70 2.69
5235 5836 4.620589 TGCAAAACATGGTCCATTTGAT 57.379 36.364 17.10 0.00 35.34 2.57
5236 5837 4.567971 TGCAAAACATGGTCCATTTGATC 58.432 39.130 17.10 4.58 35.34 2.92
5237 5838 4.283978 TGCAAAACATGGTCCATTTGATCT 59.716 37.500 17.10 0.00 35.34 2.75
5238 5839 4.628333 GCAAAACATGGTCCATTTGATCTG 59.372 41.667 17.10 3.22 35.34 2.90
5239 5840 5.567224 GCAAAACATGGTCCATTTGATCTGA 60.567 40.000 17.10 0.00 35.34 3.27
5240 5841 5.649782 AAACATGGTCCATTTGATCTGAC 57.350 39.130 0.00 0.00 0.00 3.51
5241 5842 3.624777 ACATGGTCCATTTGATCTGACC 58.375 45.455 0.00 0.00 45.99 4.02
5242 5843 3.267812 ACATGGTCCATTTGATCTGACCT 59.732 43.478 0.00 0.00 45.98 3.85
5243 5844 4.474651 ACATGGTCCATTTGATCTGACCTA 59.525 41.667 0.00 0.00 45.98 3.08
5244 5845 4.760530 TGGTCCATTTGATCTGACCTAG 57.239 45.455 8.79 0.00 45.98 3.02
5245 5846 3.118261 TGGTCCATTTGATCTGACCTAGC 60.118 47.826 8.79 0.00 45.98 3.42
5246 5847 3.118261 GGTCCATTTGATCTGACCTAGCA 60.118 47.826 0.00 0.00 43.16 3.49
5247 5848 4.125703 GTCCATTTGATCTGACCTAGCAG 58.874 47.826 0.00 0.00 37.24 4.24
5248 5849 3.135348 TCCATTTGATCTGACCTAGCAGG 59.865 47.826 0.00 1.16 42.49 4.85
5249 5850 3.474600 CATTTGATCTGACCTAGCAGGG 58.525 50.000 7.06 0.71 40.58 4.45
5250 5851 2.254152 TTGATCTGACCTAGCAGGGT 57.746 50.000 0.07 0.07 40.58 4.34
5258 5859 2.568623 ACCTAGCAGGGTCTGTTTTG 57.431 50.000 7.06 0.00 40.58 2.44
5259 5860 1.073923 ACCTAGCAGGGTCTGTTTTGG 59.926 52.381 7.06 0.00 40.58 3.28
5260 5861 1.168714 CTAGCAGGGTCTGTTTTGGC 58.831 55.000 0.00 0.00 33.43 4.52
5261 5862 0.476338 TAGCAGGGTCTGTTTTGGCA 59.524 50.000 0.00 0.00 33.43 4.92
5262 5863 0.396974 AGCAGGGTCTGTTTTGGCAA 60.397 50.000 0.00 0.00 33.43 4.52
5263 5864 0.463620 GCAGGGTCTGTTTTGGCAAA 59.536 50.000 8.93 8.93 33.43 3.68
5264 5865 1.070601 GCAGGGTCTGTTTTGGCAAAT 59.929 47.619 14.29 0.00 33.43 2.32
5265 5866 2.298729 GCAGGGTCTGTTTTGGCAAATA 59.701 45.455 14.29 5.43 33.43 1.40
5266 5867 3.055891 GCAGGGTCTGTTTTGGCAAATAT 60.056 43.478 14.29 0.00 33.43 1.28
5267 5868 4.563374 GCAGGGTCTGTTTTGGCAAATATT 60.563 41.667 14.29 0.00 33.43 1.28
5268 5869 4.931002 CAGGGTCTGTTTTGGCAAATATTG 59.069 41.667 14.29 5.13 0.00 1.90
5269 5870 4.592778 AGGGTCTGTTTTGGCAAATATTGT 59.407 37.500 14.29 0.00 0.00 2.71
5270 5871 5.777732 AGGGTCTGTTTTGGCAAATATTGTA 59.222 36.000 14.29 0.00 0.00 2.41
5271 5872 6.071391 AGGGTCTGTTTTGGCAAATATTGTAG 60.071 38.462 14.29 6.43 0.00 2.74
5272 5873 6.295067 GGGTCTGTTTTGGCAAATATTGTAGT 60.295 38.462 14.29 0.00 0.00 2.73
5273 5874 6.586082 GGTCTGTTTTGGCAAATATTGTAGTG 59.414 38.462 14.29 0.00 0.00 2.74
5274 5875 7.145323 GTCTGTTTTGGCAAATATTGTAGTGT 58.855 34.615 14.29 0.00 0.00 3.55
5275 5876 7.326063 GTCTGTTTTGGCAAATATTGTAGTGTC 59.674 37.037 14.29 0.00 0.00 3.67
5276 5877 7.013750 TCTGTTTTGGCAAATATTGTAGTGTCA 59.986 33.333 14.29 0.00 0.00 3.58
5277 5878 7.665690 TGTTTTGGCAAATATTGTAGTGTCAT 58.334 30.769 14.29 0.00 0.00 3.06
5278 5879 7.598118 TGTTTTGGCAAATATTGTAGTGTCATG 59.402 33.333 14.29 0.00 0.00 3.07
5279 5880 6.832520 TTGGCAAATATTGTAGTGTCATGT 57.167 33.333 0.00 0.00 0.00 3.21
5280 5881 7.929941 TTGGCAAATATTGTAGTGTCATGTA 57.070 32.000 0.00 0.00 0.00 2.29
5281 5882 7.929941 TGGCAAATATTGTAGTGTCATGTAA 57.070 32.000 0.00 0.00 0.00 2.41
5282 5883 8.341892 TGGCAAATATTGTAGTGTCATGTAAA 57.658 30.769 0.00 0.00 0.00 2.01
5283 5884 8.965819 TGGCAAATATTGTAGTGTCATGTAAAT 58.034 29.630 0.00 0.00 0.00 1.40
5284 5885 9.801873 GGCAAATATTGTAGTGTCATGTAAATT 57.198 29.630 0.00 0.00 0.00 1.82
5292 5893 7.757526 TGTAGTGTCATGTAAATTTGGTATGC 58.242 34.615 0.00 1.29 0.00 3.14
5293 5894 6.832520 AGTGTCATGTAAATTTGGTATGCA 57.167 33.333 0.00 0.00 0.00 3.96
5294 5895 7.225784 AGTGTCATGTAAATTTGGTATGCAA 57.774 32.000 0.00 0.00 0.00 4.08
5295 5896 7.665690 AGTGTCATGTAAATTTGGTATGCAAA 58.334 30.769 0.00 0.00 0.00 3.68
5296 5897 7.598493 AGTGTCATGTAAATTTGGTATGCAAAC 59.402 33.333 0.00 3.01 0.00 2.93
5297 5898 6.584184 TGTCATGTAAATTTGGTATGCAAACG 59.416 34.615 0.00 0.00 0.00 3.60
5298 5899 6.804295 GTCATGTAAATTTGGTATGCAAACGA 59.196 34.615 0.00 0.00 0.00 3.85
5299 5900 7.008266 GTCATGTAAATTTGGTATGCAAACGAG 59.992 37.037 0.00 0.00 0.00 4.18
5300 5901 6.320494 TGTAAATTTGGTATGCAAACGAGT 57.680 33.333 0.00 0.00 0.00 4.18
5301 5902 7.436430 TGTAAATTTGGTATGCAAACGAGTA 57.564 32.000 0.00 0.00 0.00 2.59
5302 5903 7.299586 TGTAAATTTGGTATGCAAACGAGTAC 58.700 34.615 0.00 0.00 0.00 2.73
5303 5904 5.950758 AATTTGGTATGCAAACGAGTACA 57.049 34.783 0.00 0.00 0.00 2.90
5304 5905 4.735662 TTTGGTATGCAAACGAGTACAC 57.264 40.909 0.00 0.00 0.00 2.90
5305 5906 3.388345 TGGTATGCAAACGAGTACACA 57.612 42.857 0.00 0.00 0.00 3.72
5306 5907 3.932822 TGGTATGCAAACGAGTACACAT 58.067 40.909 0.00 0.00 0.00 3.21
5307 5908 5.074584 TGGTATGCAAACGAGTACACATA 57.925 39.130 0.00 0.00 0.00 2.29
5308 5909 5.106442 TGGTATGCAAACGAGTACACATAG 58.894 41.667 0.00 0.00 0.00 2.23
5309 5910 5.107133 GGTATGCAAACGAGTACACATAGT 58.893 41.667 0.00 0.00 0.00 2.12
5310 5911 5.579511 GGTATGCAAACGAGTACACATAGTT 59.420 40.000 0.00 0.00 0.00 2.24
5311 5912 6.753279 GGTATGCAAACGAGTACACATAGTTA 59.247 38.462 0.00 0.00 0.00 2.24
5312 5913 7.276218 GGTATGCAAACGAGTACACATAGTTAA 59.724 37.037 0.00 0.00 0.00 2.01
5313 5914 6.456447 TGCAAACGAGTACACATAGTTAAC 57.544 37.500 0.00 0.00 0.00 2.01
5314 5915 5.117440 TGCAAACGAGTACACATAGTTAACG 59.883 40.000 0.00 0.00 0.00 3.18
5315 5916 5.117592 GCAAACGAGTACACATAGTTAACGT 59.882 40.000 0.00 0.00 34.33 3.99
5316 5917 6.510759 CAAACGAGTACACATAGTTAACGTG 58.489 40.000 9.68 9.68 33.65 4.49
5317 5918 5.611796 ACGAGTACACATAGTTAACGTGA 57.388 39.130 16.08 0.58 34.69 4.35
5318 5919 5.385617 ACGAGTACACATAGTTAACGTGAC 58.614 41.667 16.08 10.71 34.69 3.67
5319 5920 4.790140 CGAGTACACATAGTTAACGTGACC 59.210 45.833 16.08 7.84 34.69 4.02
5320 5921 4.726416 AGTACACATAGTTAACGTGACCG 58.274 43.478 16.08 9.02 40.83 4.79
5321 5922 2.950433 ACACATAGTTAACGTGACCGG 58.050 47.619 16.08 0.00 38.78 5.28
5322 5923 2.264813 CACATAGTTAACGTGACCGGG 58.735 52.381 17.32 0.00 38.78 5.73
5323 5924 1.895131 ACATAGTTAACGTGACCGGGT 59.105 47.619 17.32 0.00 38.78 5.28
5324 5925 3.088532 ACATAGTTAACGTGACCGGGTA 58.911 45.455 17.32 0.00 38.78 3.69
5325 5926 3.129287 ACATAGTTAACGTGACCGGGTAG 59.871 47.826 17.32 0.00 38.78 3.18
5326 5927 1.620822 AGTTAACGTGACCGGGTAGT 58.379 50.000 6.32 0.00 38.78 2.73
5327 5928 1.963515 AGTTAACGTGACCGGGTAGTT 59.036 47.619 6.32 15.98 38.78 2.24
5328 5929 2.061028 GTTAACGTGACCGGGTAGTTG 58.939 52.381 19.13 6.15 38.78 3.16
5329 5930 1.614996 TAACGTGACCGGGTAGTTGA 58.385 50.000 19.13 6.58 38.78 3.18
5330 5931 0.316204 AACGTGACCGGGTAGTTGAG 59.684 55.000 6.32 0.00 38.78 3.02
5331 5932 0.538057 ACGTGACCGGGTAGTTGAGA 60.538 55.000 6.32 0.00 38.78 3.27
5332 5933 0.815734 CGTGACCGGGTAGTTGAGAT 59.184 55.000 6.32 0.00 0.00 2.75
5333 5934 1.202268 CGTGACCGGGTAGTTGAGATC 60.202 57.143 6.32 0.00 0.00 2.75
5334 5935 2.100989 GTGACCGGGTAGTTGAGATCT 58.899 52.381 6.32 0.00 0.00 2.75
5335 5936 3.285484 GTGACCGGGTAGTTGAGATCTA 58.715 50.000 6.32 0.00 0.00 1.98
5336 5937 3.066481 GTGACCGGGTAGTTGAGATCTAC 59.934 52.174 6.32 0.00 37.58 2.59
5337 5938 3.285484 GACCGGGTAGTTGAGATCTACA 58.715 50.000 6.32 0.00 39.36 2.74
5338 5939 3.288964 ACCGGGTAGTTGAGATCTACAG 58.711 50.000 6.32 0.00 39.36 2.74
5339 5940 3.053842 ACCGGGTAGTTGAGATCTACAGA 60.054 47.826 6.32 0.00 39.36 3.41
5340 5941 4.145807 CCGGGTAGTTGAGATCTACAGAT 58.854 47.826 0.00 0.00 39.36 2.90
5341 5942 5.163120 ACCGGGTAGTTGAGATCTACAGATA 60.163 44.000 6.32 0.00 39.36 1.98
5342 5943 5.413213 CCGGGTAGTTGAGATCTACAGATAG 59.587 48.000 0.00 0.00 39.36 2.08
5343 5944 6.231951 CGGGTAGTTGAGATCTACAGATAGA 58.768 44.000 0.00 0.00 41.76 1.98
5344 5945 6.370442 CGGGTAGTTGAGATCTACAGATAGAG 59.630 46.154 0.00 0.00 40.84 2.43
5345 5946 7.228590 GGGTAGTTGAGATCTACAGATAGAGT 58.771 42.308 0.00 0.00 40.84 3.24
5346 5947 7.722285 GGGTAGTTGAGATCTACAGATAGAGTT 59.278 40.741 0.00 0.00 40.84 3.01
5347 5948 8.780249 GGTAGTTGAGATCTACAGATAGAGTTC 58.220 40.741 0.00 0.00 40.84 3.01
5348 5949 9.555727 GTAGTTGAGATCTACAGATAGAGTTCT 57.444 37.037 0.00 0.00 40.84 3.01
5350 5951 9.474313 AGTTGAGATCTACAGATAGAGTTCTTT 57.526 33.333 0.00 0.00 40.84 2.52
5351 5952 9.515020 GTTGAGATCTACAGATAGAGTTCTTTG 57.485 37.037 0.00 0.00 40.84 2.77
5352 5953 9.467796 TTGAGATCTACAGATAGAGTTCTTTGA 57.532 33.333 0.00 0.00 40.84 2.69
5353 5954 9.639563 TGAGATCTACAGATAGAGTTCTTTGAT 57.360 33.333 0.00 0.00 40.84 2.57
5398 5999 8.651389 TCTCCATATATCTACTGTGAAAAAGGG 58.349 37.037 0.00 0.00 0.00 3.95
5399 6000 7.745717 TCCATATATCTACTGTGAAAAAGGGG 58.254 38.462 0.00 0.00 0.00 4.79
5400 6001 6.431234 CCATATATCTACTGTGAAAAAGGGGC 59.569 42.308 0.00 0.00 0.00 5.80
5401 6002 3.806949 ATCTACTGTGAAAAAGGGGCA 57.193 42.857 0.00 0.00 0.00 5.36
5402 6003 3.586470 TCTACTGTGAAAAAGGGGCAA 57.414 42.857 0.00 0.00 0.00 4.52
5403 6004 3.904717 TCTACTGTGAAAAAGGGGCAAA 58.095 40.909 0.00 0.00 0.00 3.68
5404 6005 4.282496 TCTACTGTGAAAAAGGGGCAAAA 58.718 39.130 0.00 0.00 0.00 2.44
5405 6006 4.898861 TCTACTGTGAAAAAGGGGCAAAAT 59.101 37.500 0.00 0.00 0.00 1.82
5406 6007 3.807553 ACTGTGAAAAAGGGGCAAAATG 58.192 40.909 0.00 0.00 0.00 2.32
5407 6008 3.454082 ACTGTGAAAAAGGGGCAAAATGA 59.546 39.130 0.00 0.00 0.00 2.57
5408 6009 4.102996 ACTGTGAAAAAGGGGCAAAATGAT 59.897 37.500 0.00 0.00 0.00 2.45
5409 6010 4.640364 TGTGAAAAAGGGGCAAAATGATC 58.360 39.130 0.00 0.00 0.00 2.92
5410 6011 4.347583 TGTGAAAAAGGGGCAAAATGATCT 59.652 37.500 0.00 0.00 0.00 2.75
5411 6012 4.692155 GTGAAAAAGGGGCAAAATGATCTG 59.308 41.667 0.00 0.00 0.00 2.90
5412 6013 4.347583 TGAAAAAGGGGCAAAATGATCTGT 59.652 37.500 0.00 0.00 0.00 3.41
5413 6014 4.980339 AAAAGGGGCAAAATGATCTGTT 57.020 36.364 0.00 0.00 0.00 3.16
5414 6015 4.980339 AAAGGGGCAAAATGATCTGTTT 57.020 36.364 0.00 0.00 0.00 2.83
5415 6016 3.967332 AGGGGCAAAATGATCTGTTTG 57.033 42.857 14.00 14.00 37.70 2.93
5416 6017 3.509442 AGGGGCAAAATGATCTGTTTGA 58.491 40.909 19.60 0.00 36.96 2.69
5417 6018 4.098894 AGGGGCAAAATGATCTGTTTGAT 58.901 39.130 19.60 5.28 36.96 2.57
5418 6019 4.533311 AGGGGCAAAATGATCTGTTTGATT 59.467 37.500 19.60 0.00 36.96 2.57
5419 6020 5.013391 AGGGGCAAAATGATCTGTTTGATTT 59.987 36.000 19.60 3.91 36.96 2.17
5420 6021 5.122711 GGGGCAAAATGATCTGTTTGATTTG 59.877 40.000 19.60 10.12 36.96 2.32
5421 6022 5.933463 GGGCAAAATGATCTGTTTGATTTGA 59.067 36.000 19.60 0.00 36.96 2.69
5422 6023 6.596497 GGGCAAAATGATCTGTTTGATTTGAT 59.404 34.615 19.60 0.00 36.96 2.57
5423 6024 7.413657 GGGCAAAATGATCTGTTTGATTTGATG 60.414 37.037 19.60 4.46 36.96 3.07
5424 6025 7.118680 GGCAAAATGATCTGTTTGATTTGATGT 59.881 33.333 19.60 0.00 36.96 3.06
5425 6026 9.142515 GCAAAATGATCTGTTTGATTTGATGTA 57.857 29.630 19.60 0.00 36.96 2.29
5429 6030 7.615582 TGATCTGTTTGATTTGATGTACTCC 57.384 36.000 0.00 0.00 35.14 3.85
5430 6031 6.599244 TGATCTGTTTGATTTGATGTACTCCC 59.401 38.462 0.00 0.00 35.14 4.30
5431 6032 6.126863 TCTGTTTGATTTGATGTACTCCCT 57.873 37.500 0.00 0.00 0.00 4.20
5432 6033 6.173339 TCTGTTTGATTTGATGTACTCCCTC 58.827 40.000 0.00 0.00 0.00 4.30
5433 6034 5.253330 TGTTTGATTTGATGTACTCCCTCC 58.747 41.667 0.00 0.00 0.00 4.30
5434 6035 5.222027 TGTTTGATTTGATGTACTCCCTCCA 60.222 40.000 0.00 0.00 0.00 3.86
5435 6036 5.715439 TTGATTTGATGTACTCCCTCCAT 57.285 39.130 0.00 0.00 0.00 3.41
5436 6037 5.715439 TGATTTGATGTACTCCCTCCATT 57.285 39.130 0.00 0.00 0.00 3.16
5437 6038 5.684704 TGATTTGATGTACTCCCTCCATTC 58.315 41.667 0.00 0.00 0.00 2.67
5438 6039 4.503714 TTTGATGTACTCCCTCCATTCC 57.496 45.455 0.00 0.00 0.00 3.01
5439 6040 2.039418 TGATGTACTCCCTCCATTCCG 58.961 52.381 0.00 0.00 0.00 4.30
5440 6041 1.344763 GATGTACTCCCTCCATTCCGG 59.655 57.143 0.00 0.00 0.00 5.14
5441 6042 0.042131 TGTACTCCCTCCATTCCGGT 59.958 55.000 0.00 0.00 35.57 5.28
5442 6043 0.464452 GTACTCCCTCCATTCCGGTG 59.536 60.000 0.00 0.00 35.57 4.94
5443 6044 1.335132 TACTCCCTCCATTCCGGTGC 61.335 60.000 0.00 0.00 35.57 5.01
5444 6045 2.609299 TCCCTCCATTCCGGTGCA 60.609 61.111 0.00 0.00 35.57 4.57
5445 6046 2.438434 CCCTCCATTCCGGTGCAC 60.438 66.667 8.80 8.80 35.57 4.57
5446 6047 2.350895 CCTCCATTCCGGTGCACA 59.649 61.111 20.43 0.00 35.57 4.57
5447 6048 1.746615 CCTCCATTCCGGTGCACAG 60.747 63.158 20.43 15.33 35.57 3.66
5448 6049 1.746615 CTCCATTCCGGTGCACAGG 60.747 63.158 27.96 27.96 35.57 4.00
5449 6050 2.751436 CCATTCCGGTGCACAGGG 60.751 66.667 31.77 24.58 0.00 4.45
5450 6051 3.443045 CATTCCGGTGCACAGGGC 61.443 66.667 31.77 8.43 45.13 5.19
5465 6066 3.889227 GGCATGTGCGCAGTTCTA 58.111 55.556 12.22 0.00 43.26 2.10
5466 6067 1.717937 GGCATGTGCGCAGTTCTAG 59.282 57.895 12.22 0.00 43.26 2.43
5467 6068 1.709147 GGCATGTGCGCAGTTCTAGG 61.709 60.000 12.22 0.00 43.26 3.02
5468 6069 1.021390 GCATGTGCGCAGTTCTAGGT 61.021 55.000 12.22 0.00 0.00 3.08
5469 6070 1.002366 CATGTGCGCAGTTCTAGGTC 58.998 55.000 12.22 0.00 0.00 3.85
5470 6071 0.608130 ATGTGCGCAGTTCTAGGTCA 59.392 50.000 12.22 1.18 0.00 4.02
5471 6072 0.608130 TGTGCGCAGTTCTAGGTCAT 59.392 50.000 12.22 0.00 0.00 3.06
5472 6073 1.281899 GTGCGCAGTTCTAGGTCATC 58.718 55.000 12.22 0.00 0.00 2.92
5473 6074 0.894835 TGCGCAGTTCTAGGTCATCA 59.105 50.000 5.66 0.00 0.00 3.07
5474 6075 1.275010 TGCGCAGTTCTAGGTCATCAA 59.725 47.619 5.66 0.00 0.00 2.57
5475 6076 2.093500 TGCGCAGTTCTAGGTCATCAAT 60.093 45.455 5.66 0.00 0.00 2.57
5476 6077 2.939103 GCGCAGTTCTAGGTCATCAATT 59.061 45.455 0.30 0.00 0.00 2.32
5477 6078 3.375299 GCGCAGTTCTAGGTCATCAATTT 59.625 43.478 0.30 0.00 0.00 1.82
5478 6079 4.728882 GCGCAGTTCTAGGTCATCAATTTG 60.729 45.833 0.30 0.00 0.00 2.32
5479 6080 4.631377 CGCAGTTCTAGGTCATCAATTTGA 59.369 41.667 0.75 0.75 0.00 2.69
5480 6081 5.446473 CGCAGTTCTAGGTCATCAATTTGAC 60.446 44.000 0.15 2.20 44.27 3.18
5481 6082 5.645497 GCAGTTCTAGGTCATCAATTTGACT 59.355 40.000 9.54 0.00 44.39 3.41
5482 6083 6.818644 GCAGTTCTAGGTCATCAATTTGACTA 59.181 38.462 9.54 0.00 44.39 2.59
5483 6084 7.334421 GCAGTTCTAGGTCATCAATTTGACTAA 59.666 37.037 9.54 0.00 44.39 2.24
5484 6085 8.660373 CAGTTCTAGGTCATCAATTTGACTAAC 58.340 37.037 9.54 8.96 44.39 2.34
5485 6086 8.598041 AGTTCTAGGTCATCAATTTGACTAACT 58.402 33.333 9.54 3.67 44.39 2.24
5486 6087 9.871238 GTTCTAGGTCATCAATTTGACTAACTA 57.129 33.333 9.54 4.62 44.39 2.24
5488 6089 9.475620 TCTAGGTCATCAATTTGACTAACTAGA 57.524 33.333 22.13 22.13 44.39 2.43
5491 6092 9.965902 AGGTCATCAATTTGACTAACTAGAAAT 57.034 29.630 9.54 0.00 44.39 2.17
5492 6093 9.994432 GGTCATCAATTTGACTAACTAGAAATG 57.006 33.333 9.54 0.00 44.39 2.32
5512 6113 8.338259 AGAAATGTGATATACGTCATCAAAAGC 58.662 33.333 12.82 3.82 34.32 3.51
5513 6114 7.552458 AATGTGATATACGTCATCAAAAGCA 57.448 32.000 12.82 8.31 34.32 3.91
5514 6115 7.734924 ATGTGATATACGTCATCAAAAGCAT 57.265 32.000 12.82 9.82 34.32 3.79
5515 6116 8.831715 ATGTGATATACGTCATCAAAAGCATA 57.168 30.769 12.82 0.00 34.32 3.14
5516 6117 8.831715 TGTGATATACGTCATCAAAAGCATAT 57.168 30.769 12.82 0.00 34.32 1.78
5517 6118 8.925700 TGTGATATACGTCATCAAAAGCATATC 58.074 33.333 12.82 7.31 34.32 1.63
5518 6119 8.925700 GTGATATACGTCATCAAAAGCATATCA 58.074 33.333 12.82 9.42 34.32 2.15
5519 6120 9.143631 TGATATACGTCATCAAAAGCATATCAG 57.856 33.333 9.64 0.00 32.17 2.90
5520 6121 9.144747 GATATACGTCATCAAAAGCATATCAGT 57.855 33.333 0.00 0.00 0.00 3.41
5521 6122 5.475273 ACGTCATCAAAAGCATATCAGTG 57.525 39.130 0.00 0.00 0.00 3.66
5522 6123 4.333649 ACGTCATCAAAAGCATATCAGTGG 59.666 41.667 0.00 0.00 0.00 4.00
5523 6124 4.571984 CGTCATCAAAAGCATATCAGTGGA 59.428 41.667 0.00 0.00 0.00 4.02
5524 6125 5.237996 CGTCATCAAAAGCATATCAGTGGAT 59.762 40.000 0.00 0.00 37.55 3.41
5525 6126 6.424812 CGTCATCAAAAGCATATCAGTGGATA 59.575 38.462 0.00 0.00 40.17 2.59
5526 6127 7.570140 CGTCATCAAAAGCATATCAGTGGATAC 60.570 40.741 0.00 0.00 38.76 2.24
5545 6146 8.102800 TGGATACATATACGTTCGAATGTAGT 57.897 34.615 28.55 23.41 46.17 2.73
5546 6147 8.570488 TGGATACATATACGTTCGAATGTAGTT 58.430 33.333 28.55 18.58 46.17 2.24
5547 6148 8.847567 GGATACATATACGTTCGAATGTAGTTG 58.152 37.037 28.55 26.97 38.00 3.16
5548 6149 9.390795 GATACATATACGTTCGAATGTAGTTGT 57.609 33.333 30.55 30.55 38.00 3.32
5549 6150 7.675270 ACATATACGTTCGAATGTAGTTGTC 57.325 36.000 28.55 1.93 34.19 3.18
5550 6151 7.478322 ACATATACGTTCGAATGTAGTTGTCT 58.522 34.615 28.55 16.81 34.19 3.41
5551 6152 8.615211 ACATATACGTTCGAATGTAGTTGTCTA 58.385 33.333 28.55 18.11 34.19 2.59
5552 6153 9.442033 CATATACGTTCGAATGTAGTTGTCTAA 57.558 33.333 28.55 10.52 34.19 2.10
5554 6155 8.922058 ATACGTTCGAATGTAGTTGTCTAAAT 57.078 30.769 28.55 11.50 34.19 1.40
5556 6157 8.922058 ACGTTCGAATGTAGTTGTCTAAATAT 57.078 30.769 21.20 0.00 0.00 1.28
5622 6223 9.367444 AGACCATTAAAGTAGTGATCTAAAACG 57.633 33.333 0.00 0.00 0.00 3.60
5623 6224 9.148104 GACCATTAAAGTAGTGATCTAAAACGT 57.852 33.333 0.00 0.00 0.00 3.99
5624 6225 9.148104 ACCATTAAAGTAGTGATCTAAAACGTC 57.852 33.333 0.00 0.00 0.00 4.34
5625 6226 9.367444 CCATTAAAGTAGTGATCTAAAACGTCT 57.633 33.333 0.00 0.00 0.00 4.18
5638 6239 9.569212 GATCTAAAACGTCTTATATTCTTTGCG 57.431 33.333 0.00 0.00 0.00 4.85
5639 6240 8.470040 TCTAAAACGTCTTATATTCTTTGCGT 57.530 30.769 0.00 0.00 0.00 5.24
5640 6241 8.589629 TCTAAAACGTCTTATATTCTTTGCGTC 58.410 33.333 0.00 0.00 0.00 5.19
5641 6242 6.963049 AAACGTCTTATATTCTTTGCGTCT 57.037 33.333 0.00 0.00 0.00 4.18
5642 6243 6.570690 AACGTCTTATATTCTTTGCGTCTC 57.429 37.500 0.00 0.00 0.00 3.36
5643 6244 5.647589 ACGTCTTATATTCTTTGCGTCTCA 58.352 37.500 0.00 0.00 0.00 3.27
5644 6245 6.097356 ACGTCTTATATTCTTTGCGTCTCAA 58.903 36.000 0.00 0.00 0.00 3.02
5645 6246 6.588756 ACGTCTTATATTCTTTGCGTCTCAAA 59.411 34.615 0.00 0.00 42.01 2.69
5646 6247 7.117236 ACGTCTTATATTCTTTGCGTCTCAAAA 59.883 33.333 0.00 0.00 43.44 2.44
5647 6248 8.116753 CGTCTTATATTCTTTGCGTCTCAAAAT 58.883 33.333 0.00 0.00 43.44 1.82
5653 6254 6.612247 TTCTTTGCGTCTCAAAATAAGTGA 57.388 33.333 0.00 0.00 43.44 3.41
5654 6255 6.801539 TCTTTGCGTCTCAAAATAAGTGAT 57.198 33.333 0.00 0.00 43.44 3.06
5655 6256 6.602179 TCTTTGCGTCTCAAAATAAGTGATG 58.398 36.000 0.00 0.00 43.44 3.07
5656 6257 5.940192 TTGCGTCTCAAAATAAGTGATGT 57.060 34.783 0.00 0.00 0.00 3.06
5657 6258 5.940192 TGCGTCTCAAAATAAGTGATGTT 57.060 34.783 0.00 0.00 0.00 2.71
5658 6259 5.927030 TGCGTCTCAAAATAAGTGATGTTC 58.073 37.500 0.00 0.00 0.00 3.18
5659 6260 5.468409 TGCGTCTCAAAATAAGTGATGTTCA 59.532 36.000 0.00 0.00 0.00 3.18
5660 6261 6.149308 TGCGTCTCAAAATAAGTGATGTTCAT 59.851 34.615 0.00 0.00 0.00 2.57
5661 6262 7.023575 GCGTCTCAAAATAAGTGATGTTCATT 58.976 34.615 0.00 0.00 0.00 2.57
5662 6263 7.538678 GCGTCTCAAAATAAGTGATGTTCATTT 59.461 33.333 0.00 0.00 31.18 2.32
5701 6302 5.665916 AAATCAGAGGCACTTATTTTGGG 57.334 39.130 0.00 0.00 41.55 4.12
5702 6303 4.591321 ATCAGAGGCACTTATTTTGGGA 57.409 40.909 0.00 0.00 41.55 4.37
5703 6304 4.380843 TCAGAGGCACTTATTTTGGGAA 57.619 40.909 0.00 0.00 41.55 3.97
5704 6305 4.079253 TCAGAGGCACTTATTTTGGGAAC 58.921 43.478 0.00 0.00 41.55 3.62
5705 6306 4.082125 CAGAGGCACTTATTTTGGGAACT 58.918 43.478 0.00 0.00 41.55 3.01
5706 6307 4.082125 AGAGGCACTTATTTTGGGAACTG 58.918 43.478 0.00 0.00 41.55 3.16
5707 6308 3.165071 AGGCACTTATTTTGGGAACTGG 58.835 45.455 0.00 0.00 27.25 4.00
5708 6309 3.161866 GGCACTTATTTTGGGAACTGGA 58.838 45.455 0.00 0.00 0.00 3.86
5709 6310 3.769300 GGCACTTATTTTGGGAACTGGAT 59.231 43.478 0.00 0.00 0.00 3.41
5710 6311 4.142160 GGCACTTATTTTGGGAACTGGATC 60.142 45.833 0.00 0.00 0.00 3.36
5711 6312 4.142160 GCACTTATTTTGGGAACTGGATCC 60.142 45.833 4.20 4.20 38.86 3.36
5712 6313 5.264395 CACTTATTTTGGGAACTGGATCCT 58.736 41.667 14.23 0.00 39.57 3.24
5713 6314 5.358160 CACTTATTTTGGGAACTGGATCCTC 59.642 44.000 14.23 1.71 39.57 3.71
5714 6315 5.254032 ACTTATTTTGGGAACTGGATCCTCT 59.746 40.000 14.23 0.00 39.57 3.69
5715 6316 6.447084 ACTTATTTTGGGAACTGGATCCTCTA 59.553 38.462 14.23 0.00 39.57 2.43
5716 6317 5.796502 ATTTTGGGAACTGGATCCTCTAA 57.203 39.130 14.23 0.18 39.57 2.10
5717 6318 4.569719 TTTGGGAACTGGATCCTCTAAC 57.430 45.455 14.23 0.49 39.57 2.34
5718 6319 2.108168 TGGGAACTGGATCCTCTAACG 58.892 52.381 14.23 0.00 39.57 3.18
5719 6320 2.108970 GGGAACTGGATCCTCTAACGT 58.891 52.381 14.23 0.00 39.57 3.99
5720 6321 3.294214 GGGAACTGGATCCTCTAACGTA 58.706 50.000 14.23 0.00 39.57 3.57
5721 6322 3.067883 GGGAACTGGATCCTCTAACGTAC 59.932 52.174 14.23 0.00 39.57 3.67
5722 6323 3.698040 GGAACTGGATCCTCTAACGTACA 59.302 47.826 14.23 0.00 36.50 2.90
5723 6324 4.439837 GGAACTGGATCCTCTAACGTACAC 60.440 50.000 14.23 0.00 36.50 2.90
5724 6325 3.693807 ACTGGATCCTCTAACGTACACA 58.306 45.455 14.23 0.00 0.00 3.72
5725 6326 4.084287 ACTGGATCCTCTAACGTACACAA 58.916 43.478 14.23 0.00 0.00 3.33
5726 6327 4.158025 ACTGGATCCTCTAACGTACACAAG 59.842 45.833 14.23 0.00 0.00 3.16
5727 6328 3.446161 TGGATCCTCTAACGTACACAAGG 59.554 47.826 14.23 0.00 0.00 3.61
5728 6329 3.446516 GGATCCTCTAACGTACACAAGGT 59.553 47.826 3.84 0.00 0.00 3.50
5729 6330 4.641989 GGATCCTCTAACGTACACAAGGTA 59.358 45.833 3.84 0.00 0.00 3.08
5730 6331 5.301298 GGATCCTCTAACGTACACAAGGTAT 59.699 44.000 3.84 0.00 33.76 2.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 8.788325 ATAAAAGGTTTATAGGTCTCACACAC 57.212 34.615 0.00 0.00 0.00 3.82
143 145 3.573598 TCGGCGAACGTAATTTGTCTTA 58.426 40.909 7.35 0.00 44.69 2.10
145 147 1.990563 CTCGGCGAACGTAATTTGTCT 59.009 47.619 12.13 0.00 44.69 3.41
147 149 1.073177 CCTCGGCGAACGTAATTTGT 58.927 50.000 12.13 0.00 44.69 2.83
155 157 1.011968 TTTGTCATCCTCGGCGAACG 61.012 55.000 12.13 3.94 46.11 3.95
160 162 2.359900 ACTGAATTTGTCATCCTCGGC 58.640 47.619 0.00 0.00 35.07 5.54
161 163 5.445939 CGTTAACTGAATTTGTCATCCTCGG 60.446 44.000 3.71 0.00 35.07 4.63
163 165 6.673316 GCTCGTTAACTGAATTTGTCATCCTC 60.673 42.308 3.71 0.00 35.07 3.71
177 179 1.155889 TGTGCCATGCTCGTTAACTG 58.844 50.000 3.71 0.00 0.00 3.16
182 184 0.523072 GTGAATGTGCCATGCTCGTT 59.477 50.000 0.00 0.00 34.61 3.85
259 261 2.749600 AGGGCAATTCATATTGGTGCA 58.250 42.857 0.00 0.00 41.21 4.57
310 312 0.034337 AGCTAAAAACCTGACGCGGA 59.966 50.000 12.47 0.00 0.00 5.54
311 313 0.872388 AAGCTAAAAACCTGACGCGG 59.128 50.000 12.47 0.00 0.00 6.46
313 315 3.305964 GGAAAAGCTAAAAACCTGACGC 58.694 45.455 0.00 0.00 0.00 5.19
314 316 3.002965 ACGGAAAAGCTAAAAACCTGACG 59.997 43.478 0.00 0.00 0.00 4.35
315 317 4.563337 ACGGAAAAGCTAAAAACCTGAC 57.437 40.909 0.00 0.00 0.00 3.51
375 379 1.382914 ATTACCCATATCCCCCAGCC 58.617 55.000 0.00 0.00 0.00 4.85
447 472 7.936847 TGGATTTTTGCTTTTGTCTCTAGTCTA 59.063 33.333 0.00 0.00 0.00 2.59
448 473 6.772716 TGGATTTTTGCTTTTGTCTCTAGTCT 59.227 34.615 0.00 0.00 0.00 3.24
449 474 6.970484 TGGATTTTTGCTTTTGTCTCTAGTC 58.030 36.000 0.00 0.00 0.00 2.59
450 475 6.959639 TGGATTTTTGCTTTTGTCTCTAGT 57.040 33.333 0.00 0.00 0.00 2.57
451 476 7.428826 AGTTGGATTTTTGCTTTTGTCTCTAG 58.571 34.615 0.00 0.00 0.00 2.43
534 559 4.501915 CGTGCCTCCGTCCCTAAATATAAA 60.502 45.833 0.00 0.00 0.00 1.40
661 698 4.961511 AGCTTCGCGGACGTGCAA 62.962 61.111 6.13 0.00 40.36 4.08
689 726 4.200283 GAGGGAGAGGAGTGCGCG 62.200 72.222 0.00 0.00 0.00 6.86
690 727 4.200283 CGAGGGAGAGGAGTGCGC 62.200 72.222 0.00 0.00 0.00 6.09
716 753 0.671781 CGAGAGCTTTGTGTGGGGAG 60.672 60.000 0.00 0.00 0.00 4.30
717 754 1.371183 CGAGAGCTTTGTGTGGGGA 59.629 57.895 0.00 0.00 0.00 4.81
858 1078 1.227999 ATCGTGTGGTCTGTTTGGCG 61.228 55.000 0.00 0.00 0.00 5.69
869 1089 2.351350 GCAGGGTTGTAAAATCGTGTGG 60.351 50.000 0.80 0.00 0.00 4.17
873 1093 1.541379 GGGCAGGGTTGTAAAATCGT 58.459 50.000 0.00 0.00 0.00 3.73
974 1199 1.304464 GCTGGAAAGTGGGGGAAGG 60.304 63.158 0.00 0.00 0.00 3.46
976 1201 2.434331 CGCTGGAAAGTGGGGGAA 59.566 61.111 0.00 0.00 0.00 3.97
977 1202 3.646715 CCGCTGGAAAGTGGGGGA 61.647 66.667 0.00 0.00 35.91 4.81
1152 1377 4.509737 GGGTAGCCCGTGAGCGAC 62.510 72.222 0.00 0.00 41.33 5.19
1470 1701 4.774503 GCGCAAGGCAGCTCCTCT 62.775 66.667 0.30 0.00 46.94 3.69
1657 1889 2.579201 CAGTGAGGCACGGGGTAG 59.421 66.667 0.00 0.00 39.64 3.18
1689 1921 9.535878 TCGTGTTTACAGCATACATTTCATATA 57.464 29.630 0.00 0.00 0.00 0.86
1719 1951 5.775686 CCATGTTGATGGCCAATTGTATAG 58.224 41.667 10.96 0.00 43.00 1.31
1796 2028 7.685481 TCCATACTTCAGAATAAGACAACCAA 58.315 34.615 0.00 0.00 0.00 3.67
1812 2044 7.908453 AGTACCTATTTGGCTATCCATACTTC 58.092 38.462 0.00 0.00 43.05 3.01
1822 2054 8.967779 ATTATCACCTAGTACCTATTTGGCTA 57.032 34.615 0.00 0.00 40.22 3.93
1832 2064 9.245481 AGCACTCTTATATTATCACCTAGTACC 57.755 37.037 0.00 0.00 0.00 3.34
1845 2214 7.401493 AGGCCATATACTGAGCACTCTTATATT 59.599 37.037 5.01 0.00 0.00 1.28
2023 2392 7.939782 TCAGTTTCTCAAAACAAAGCATCATA 58.060 30.769 4.09 0.00 45.94 2.15
2190 2560 0.998928 TCAATCCAAGCAGGGCCTTA 59.001 50.000 1.32 0.00 38.24 2.69
2277 2647 4.244862 CCCTGTTTGGATTGCATGTAAAC 58.755 43.478 0.00 0.00 38.35 2.01
2387 2758 8.613060 ACACATGCATATATTTCGAAGAGATT 57.387 30.769 0.00 0.00 38.43 2.40
2482 2936 5.571357 AGTTTTAAGTTGTGTTGTTTCGCTG 59.429 36.000 0.00 0.00 0.00 5.18
2497 2951 5.937111 TGGAAACTCAGGCTAGTTTTAAGT 58.063 37.500 17.31 2.46 46.92 2.24
2503 2957 4.917906 AGAATGGAAACTCAGGCTAGTT 57.082 40.909 0.00 0.00 41.46 2.24
2504 2958 4.917906 AAGAATGGAAACTCAGGCTAGT 57.082 40.909 0.00 0.00 0.00 2.57
2543 2997 4.021016 ACTGGACTCATCACTGAACTAACC 60.021 45.833 0.00 0.00 0.00 2.85
2658 3116 4.153411 ACTTCTGCTTCCAGTACTACTGT 58.847 43.478 14.00 0.00 44.50 3.55
2659 3117 4.792521 ACTTCTGCTTCCAGTACTACTG 57.207 45.455 9.02 9.02 45.53 2.74
2660 3118 5.081032 AGAACTTCTGCTTCCAGTACTACT 58.919 41.667 0.00 0.00 40.09 2.57
2733 3191 2.287373 GTCACAGACGCTAGCTATACGT 59.713 50.000 18.60 18.60 43.83 3.57
2747 3205 3.325293 GAGCCATCTCTTTGTCACAGA 57.675 47.619 0.00 0.00 36.42 3.41
2784 3242 2.735762 GCGGTTCAGCGTAGAGAAGATT 60.736 50.000 0.00 0.00 0.00 2.40
2881 3339 7.737972 TGATTCTACCGAGAGAGAGATTTAG 57.262 40.000 0.00 0.00 31.77 1.85
2943 3401 9.709600 AATTAAGCCAAAACAATTAAACAAACG 57.290 25.926 0.00 0.00 0.00 3.60
2958 3419 6.701145 TGTACACAACAGAATTAAGCCAAA 57.299 33.333 0.00 0.00 33.01 3.28
2989 3450 4.519540 ACCAGGCATGAACAACATAAAC 57.480 40.909 0.00 0.00 37.46 2.01
3199 3665 7.696755 TGATCATAAACAGTTGCACATCATAC 58.303 34.615 0.00 0.00 0.00 2.39
3231 3697 4.377839 TCAAACTGTTGAAATGCGGAAA 57.622 36.364 0.00 0.00 40.87 3.13
3404 3870 1.884579 CTAGCCATCAATCATGCCCAC 59.115 52.381 0.00 0.00 0.00 4.61
3485 3952 6.159293 TGCAAGGAGCTATATATGTTTCTCG 58.841 40.000 0.00 0.00 45.94 4.04
3593 4060 0.965439 GGCACCACCTTGCATTGTTA 59.035 50.000 0.00 0.00 44.94 2.41
3616 4083 3.905968 TGAATTGATGTCATGCCATCCT 58.094 40.909 13.84 0.00 40.43 3.24
3761 4232 5.523188 CCTGCATACAAACAAGCTTTTCAAA 59.477 36.000 0.00 0.00 0.00 2.69
3915 4386 6.832520 TGCAATCAAACAAGCTAGGAAATA 57.167 33.333 0.00 0.00 0.00 1.40
4004 4475 3.652055 AGCCTCCTCAAGACAGATATGT 58.348 45.455 0.00 0.00 0.00 2.29
4015 4486 0.535780 CACTGTGCAAGCCTCCTCAA 60.536 55.000 0.00 0.00 0.00 3.02
4065 4536 8.298140 CGGAGGGAGTACTAACTTAAGATATTG 58.702 40.741 10.09 0.00 35.56 1.90
4076 4547 1.341383 TGGGACGGAGGGAGTACTAAC 60.341 57.143 0.00 0.00 0.00 2.34
4079 4550 0.115745 TTTGGGACGGAGGGAGTACT 59.884 55.000 0.00 0.00 0.00 2.73
4080 4551 0.978907 TTTTGGGACGGAGGGAGTAC 59.021 55.000 0.00 0.00 0.00 2.73
4081 4552 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
4082 4553 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
4083 4554 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
4084 4555 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
4085 4556 2.026636 TCACTTATTTTGGGACGGAGGG 60.027 50.000 0.00 0.00 0.00 4.30
4086 4557 3.007635 GTCACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
4087 4558 3.933332 GAGTCACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 33.84 4.63
4088 4559 3.325425 TGAGTCACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 33.84 4.69
4089 4560 3.670625 TGAGTCACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 33.84 4.79
4090 4561 5.238650 AGTTTGAGTCACTTATTTTGGGACG 59.761 40.000 0.00 0.00 33.84 4.79
4091 4562 6.635030 AGTTTGAGTCACTTATTTTGGGAC 57.365 37.500 0.00 0.00 0.00 4.46
4092 4563 6.605594 ACAAGTTTGAGTCACTTATTTTGGGA 59.394 34.615 0.00 0.00 32.48 4.37
4093 4564 6.805713 ACAAGTTTGAGTCACTTATTTTGGG 58.194 36.000 0.00 0.00 32.48 4.12
4094 4565 8.621286 AGTACAAGTTTGAGTCACTTATTTTGG 58.379 33.333 0.00 0.00 32.48 3.28
4100 4571 9.880157 AAAGTTAGTACAAGTTTGAGTCACTTA 57.120 29.630 0.00 0.00 32.48 2.24
4101 4572 8.665685 CAAAGTTAGTACAAGTTTGAGTCACTT 58.334 33.333 21.39 0.00 40.96 3.16
4102 4573 7.822822 ACAAAGTTAGTACAAGTTTGAGTCACT 59.177 33.333 27.03 13.05 40.96 3.41
4103 4574 7.971455 ACAAAGTTAGTACAAGTTTGAGTCAC 58.029 34.615 27.03 0.00 40.96 3.67
4104 4575 9.656040 TTACAAAGTTAGTACAAGTTTGAGTCA 57.344 29.630 27.03 15.43 40.96 3.41
4125 4596 9.221933 TGACTCAAACTTGTTCTAACTTTACAA 57.778 29.630 0.00 0.00 0.00 2.41
4126 4597 8.662141 GTGACTCAAACTTGTTCTAACTTTACA 58.338 33.333 0.00 0.00 0.00 2.41
4127 4598 8.880750 AGTGACTCAAACTTGTTCTAACTTTAC 58.119 33.333 0.00 0.00 0.00 2.01
4128 4599 9.444600 AAGTGACTCAAACTTGTTCTAACTTTA 57.555 29.630 0.00 0.00 36.52 1.85
4129 4600 7.923414 AGTGACTCAAACTTGTTCTAACTTT 57.077 32.000 0.00 0.00 0.00 2.66
4130 4601 7.923414 AAGTGACTCAAACTTGTTCTAACTT 57.077 32.000 0.00 0.00 36.52 2.66
4131 4602 9.614792 AATAAGTGACTCAAACTTGTTCTAACT 57.385 29.630 0.00 0.00 34.95 2.24
4135 4606 8.190784 CCAAAATAAGTGACTCAAACTTGTTCT 58.809 33.333 0.00 0.00 37.81 3.01
4136 4607 7.435192 CCCAAAATAAGTGACTCAAACTTGTTC 59.565 37.037 0.00 0.00 37.81 3.18
4137 4608 7.123547 TCCCAAAATAAGTGACTCAAACTTGTT 59.876 33.333 0.00 0.00 39.68 2.83
4138 4609 6.605594 TCCCAAAATAAGTGACTCAAACTTGT 59.394 34.615 0.00 0.00 38.32 3.16
4139 4610 6.918022 GTCCCAAAATAAGTGACTCAAACTTG 59.082 38.462 0.00 0.00 38.32 3.16
4140 4611 6.238648 CGTCCCAAAATAAGTGACTCAAACTT 60.239 38.462 0.00 0.00 40.82 2.66
4141 4612 5.238650 CGTCCCAAAATAAGTGACTCAAACT 59.761 40.000 0.00 0.00 0.00 2.66
4142 4613 5.449304 CGTCCCAAAATAAGTGACTCAAAC 58.551 41.667 0.00 0.00 0.00 2.93
4143 4614 4.517453 CCGTCCCAAAATAAGTGACTCAAA 59.483 41.667 0.00 0.00 0.00 2.69
4144 4615 4.069304 CCGTCCCAAAATAAGTGACTCAA 58.931 43.478 0.00 0.00 0.00 3.02
4145 4616 3.325425 TCCGTCCCAAAATAAGTGACTCA 59.675 43.478 0.00 0.00 0.00 3.41
4146 4617 3.683340 GTCCGTCCCAAAATAAGTGACTC 59.317 47.826 0.00 0.00 0.00 3.36
4147 4618 3.671716 GTCCGTCCCAAAATAAGTGACT 58.328 45.455 0.00 0.00 0.00 3.41
4148 4619 2.414138 CGTCCGTCCCAAAATAAGTGAC 59.586 50.000 0.00 0.00 0.00 3.67
4149 4620 2.613474 CCGTCCGTCCCAAAATAAGTGA 60.613 50.000 0.00 0.00 0.00 3.41
4150 4621 1.735571 CCGTCCGTCCCAAAATAAGTG 59.264 52.381 0.00 0.00 0.00 3.16
4151 4622 1.624813 TCCGTCCGTCCCAAAATAAGT 59.375 47.619 0.00 0.00 0.00 2.24
4152 4623 2.277084 CTCCGTCCGTCCCAAAATAAG 58.723 52.381 0.00 0.00 0.00 1.73
4153 4624 1.624813 ACTCCGTCCGTCCCAAAATAA 59.375 47.619 0.00 0.00 0.00 1.40
4154 4625 1.269012 ACTCCGTCCGTCCCAAAATA 58.731 50.000 0.00 0.00 0.00 1.40
4155 4626 1.206371 CTACTCCGTCCGTCCCAAAAT 59.794 52.381 0.00 0.00 0.00 1.82
4156 4627 0.604578 CTACTCCGTCCGTCCCAAAA 59.395 55.000 0.00 0.00 0.00 2.44
4157 4628 0.540365 ACTACTCCGTCCGTCCCAAA 60.540 55.000 0.00 0.00 0.00 3.28
4158 4629 0.540365 AACTACTCCGTCCGTCCCAA 60.540 55.000 0.00 0.00 0.00 4.12
4159 4630 0.327924 TAACTACTCCGTCCGTCCCA 59.672 55.000 0.00 0.00 0.00 4.37
4160 4631 1.606189 GATAACTACTCCGTCCGTCCC 59.394 57.143 0.00 0.00 0.00 4.46
4161 4632 2.290093 CTGATAACTACTCCGTCCGTCC 59.710 54.545 0.00 0.00 0.00 4.79
4162 4633 2.290093 CCTGATAACTACTCCGTCCGTC 59.710 54.545 0.00 0.00 0.00 4.79
4163 4634 2.295885 CCTGATAACTACTCCGTCCGT 58.704 52.381 0.00 0.00 0.00 4.69
4164 4635 2.295885 ACCTGATAACTACTCCGTCCG 58.704 52.381 0.00 0.00 0.00 4.79
4165 4636 3.243002 CGAACCTGATAACTACTCCGTCC 60.243 52.174 0.00 0.00 0.00 4.79
4166 4637 3.243002 CCGAACCTGATAACTACTCCGTC 60.243 52.174 0.00 0.00 0.00 4.79
4167 4638 2.686915 CCGAACCTGATAACTACTCCGT 59.313 50.000 0.00 0.00 0.00 4.69
4168 4639 2.947652 TCCGAACCTGATAACTACTCCG 59.052 50.000 0.00 0.00 0.00 4.63
4169 4640 5.532664 AATCCGAACCTGATAACTACTCC 57.467 43.478 0.00 0.00 0.00 3.85
4170 4641 6.141462 CGTAATCCGAACCTGATAACTACTC 58.859 44.000 0.00 0.00 39.56 2.59
4187 4786 6.774354 TCTGTCAAGTTGTTTACGTAATCC 57.226 37.500 9.18 3.81 0.00 3.01
4205 4804 9.548208 GAAAGCATAACAATTAAGAGTTCTGTC 57.452 33.333 0.00 0.00 0.00 3.51
4439 5038 5.277345 CCACTTGAAAGGTTAGAAGAACACG 60.277 44.000 0.00 0.00 0.00 4.49
4466 5066 7.557719 ACAAGAATCCCCTAGTTTGTGAATATG 59.442 37.037 0.00 0.00 0.00 1.78
4478 5078 6.476378 TCTCAAAAGAACAAGAATCCCCTAG 58.524 40.000 0.00 0.00 0.00 3.02
4481 5081 6.596309 AATCTCAAAAGAACAAGAATCCCC 57.404 37.500 0.00 0.00 34.49 4.81
4502 5102 5.714806 ACATTTCGAACCCATCCAACTTAAT 59.285 36.000 0.00 0.00 0.00 1.40
4558 5159 2.355756 GCGACCTGCACAATGTGATAAT 59.644 45.455 18.66 0.00 45.45 1.28
4721 5322 2.021457 CCGGAAAAACGCTATTGGGAT 58.979 47.619 0.00 0.00 0.00 3.85
4739 5340 5.455525 GTGACACAAAATCAGAAAGAAACCG 59.544 40.000 0.00 0.00 0.00 4.44
4838 5439 5.710099 CACAACACCTTCATGTATTTACCCT 59.290 40.000 0.00 0.00 30.75 4.34
4839 5440 5.708230 TCACAACACCTTCATGTATTTACCC 59.292 40.000 0.00 0.00 30.75 3.69
4855 5456 5.966503 TGCGTAGTTACAAAATTCACAACAC 59.033 36.000 0.00 0.00 0.00 3.32
4898 5499 2.147562 TATTACCACCCCCACCCCCA 62.148 60.000 0.00 0.00 0.00 4.96
5209 5810 7.845037 TCAAATGGACCATGTTTTGCATTATA 58.155 30.769 8.02 0.00 35.19 0.98
5210 5811 6.709281 TCAAATGGACCATGTTTTGCATTAT 58.291 32.000 8.02 0.00 35.19 1.28
5211 5812 6.106648 TCAAATGGACCATGTTTTGCATTA 57.893 33.333 8.02 0.00 35.19 1.90
5212 5813 4.970711 TCAAATGGACCATGTTTTGCATT 58.029 34.783 8.02 0.00 35.19 3.56
5213 5814 4.620589 TCAAATGGACCATGTTTTGCAT 57.379 36.364 8.02 0.00 38.60 3.96
5214 5815 4.283978 AGATCAAATGGACCATGTTTTGCA 59.716 37.500 8.02 1.48 0.00 4.08
5215 5816 4.628333 CAGATCAAATGGACCATGTTTTGC 59.372 41.667 8.02 0.00 0.00 3.68
5216 5817 5.865552 GTCAGATCAAATGGACCATGTTTTG 59.134 40.000 8.02 10.07 0.00 2.44
5217 5818 6.029346 GTCAGATCAAATGGACCATGTTTT 57.971 37.500 8.02 0.00 0.00 2.43
5218 5819 5.649782 GTCAGATCAAATGGACCATGTTT 57.350 39.130 8.02 0.00 0.00 2.83
5225 5826 4.125703 CTGCTAGGTCAGATCAAATGGAC 58.874 47.826 0.00 0.00 36.19 4.02
5226 5827 3.135348 CCTGCTAGGTCAGATCAAATGGA 59.865 47.826 0.00 0.00 36.19 3.41
5227 5828 3.474600 CCTGCTAGGTCAGATCAAATGG 58.525 50.000 0.00 0.00 36.19 3.16
5228 5829 3.118112 ACCCTGCTAGGTCAGATCAAATG 60.118 47.826 0.00 0.00 33.81 2.32
5229 5830 3.118531 ACCCTGCTAGGTCAGATCAAAT 58.881 45.455 0.00 0.00 33.81 2.32
5230 5831 2.551270 ACCCTGCTAGGTCAGATCAAA 58.449 47.619 0.00 0.00 33.81 2.69
5231 5832 2.254152 ACCCTGCTAGGTCAGATCAA 57.746 50.000 0.00 0.00 33.81 2.57
5239 5840 1.073923 CCAAAACAGACCCTGCTAGGT 59.926 52.381 0.00 0.00 45.12 3.08
5240 5841 1.826385 CCAAAACAGACCCTGCTAGG 58.174 55.000 0.00 0.00 34.37 3.02
5241 5842 1.168714 GCCAAAACAGACCCTGCTAG 58.831 55.000 0.00 0.00 34.37 3.42
5242 5843 0.476338 TGCCAAAACAGACCCTGCTA 59.524 50.000 0.00 0.00 34.37 3.49
5243 5844 0.396974 TTGCCAAAACAGACCCTGCT 60.397 50.000 0.00 0.00 34.37 4.24
5244 5845 0.463620 TTTGCCAAAACAGACCCTGC 59.536 50.000 0.00 0.00 34.37 4.85
5245 5846 4.806640 ATATTTGCCAAAACAGACCCTG 57.193 40.909 0.00 0.00 37.52 4.45
5246 5847 4.592778 ACAATATTTGCCAAAACAGACCCT 59.407 37.500 0.00 0.00 0.00 4.34
5247 5848 4.893608 ACAATATTTGCCAAAACAGACCC 58.106 39.130 0.00 0.00 0.00 4.46
5248 5849 6.586082 CACTACAATATTTGCCAAAACAGACC 59.414 38.462 0.00 0.00 0.00 3.85
5249 5850 7.145323 ACACTACAATATTTGCCAAAACAGAC 58.855 34.615 0.00 0.00 0.00 3.51
5250 5851 7.013750 TGACACTACAATATTTGCCAAAACAGA 59.986 33.333 0.00 0.00 0.00 3.41
5251 5852 7.144661 TGACACTACAATATTTGCCAAAACAG 58.855 34.615 0.00 0.00 0.00 3.16
5252 5853 7.043961 TGACACTACAATATTTGCCAAAACA 57.956 32.000 0.00 0.00 0.00 2.83
5253 5854 7.598493 ACATGACACTACAATATTTGCCAAAAC 59.402 33.333 0.00 0.00 0.00 2.43
5254 5855 7.665690 ACATGACACTACAATATTTGCCAAAA 58.334 30.769 0.00 0.00 0.00 2.44
5255 5856 7.225784 ACATGACACTACAATATTTGCCAAA 57.774 32.000 0.00 0.00 0.00 3.28
5256 5857 6.832520 ACATGACACTACAATATTTGCCAA 57.167 33.333 0.00 0.00 0.00 4.52
5257 5858 7.929941 TTACATGACACTACAATATTTGCCA 57.070 32.000 0.00 0.00 0.00 4.92
5258 5859 9.801873 AATTTACATGACACTACAATATTTGCC 57.198 29.630 0.00 0.00 0.00 4.52
5266 5867 8.240682 GCATACCAAATTTACATGACACTACAA 58.759 33.333 0.00 0.00 0.00 2.41
5267 5868 7.391833 TGCATACCAAATTTACATGACACTACA 59.608 33.333 0.00 0.00 0.00 2.74
5268 5869 7.757526 TGCATACCAAATTTACATGACACTAC 58.242 34.615 0.00 0.00 0.00 2.73
5269 5870 7.929941 TGCATACCAAATTTACATGACACTA 57.070 32.000 0.00 0.00 0.00 2.74
5270 5871 6.832520 TGCATACCAAATTTACATGACACT 57.167 33.333 0.00 0.00 0.00 3.55
5271 5872 7.410300 CGTTTGCATACCAAATTTACATGACAC 60.410 37.037 0.00 3.22 44.61 3.67
5272 5873 6.584184 CGTTTGCATACCAAATTTACATGACA 59.416 34.615 0.00 5.22 44.61 3.58
5273 5874 6.804295 TCGTTTGCATACCAAATTTACATGAC 59.196 34.615 0.00 3.42 44.61 3.06
5274 5875 6.914259 TCGTTTGCATACCAAATTTACATGA 58.086 32.000 0.00 0.00 44.61 3.07
5275 5876 6.806249 ACTCGTTTGCATACCAAATTTACATG 59.194 34.615 1.46 0.00 44.61 3.21
5276 5877 6.919721 ACTCGTTTGCATACCAAATTTACAT 58.080 32.000 1.46 0.00 44.61 2.29
5277 5878 6.320494 ACTCGTTTGCATACCAAATTTACA 57.680 33.333 1.46 0.00 44.61 2.41
5278 5879 7.269724 GTGTACTCGTTTGCATACCAAATTTAC 59.730 37.037 1.46 0.00 44.61 2.01
5279 5880 7.041303 TGTGTACTCGTTTGCATACCAAATTTA 60.041 33.333 1.46 0.00 44.61 1.40
5280 5881 6.146898 GTGTACTCGTTTGCATACCAAATTT 58.853 36.000 1.46 0.00 44.61 1.82
5281 5882 5.239744 TGTGTACTCGTTTGCATACCAAATT 59.760 36.000 1.46 0.00 44.61 1.82
5282 5883 4.757657 TGTGTACTCGTTTGCATACCAAAT 59.242 37.500 1.46 0.00 44.61 2.32
5283 5884 4.127907 TGTGTACTCGTTTGCATACCAAA 58.872 39.130 1.46 0.00 40.97 3.28
5284 5885 3.729966 TGTGTACTCGTTTGCATACCAA 58.270 40.909 1.46 0.00 0.00 3.67
5285 5886 3.388345 TGTGTACTCGTTTGCATACCA 57.612 42.857 1.46 0.00 0.00 3.25
5286 5887 5.107133 ACTATGTGTACTCGTTTGCATACC 58.893 41.667 1.46 0.00 0.00 2.73
5287 5888 6.642683 AACTATGTGTACTCGTTTGCATAC 57.357 37.500 0.00 0.00 0.00 2.39
5288 5889 7.008538 CGTTAACTATGTGTACTCGTTTGCATA 59.991 37.037 3.71 0.00 0.00 3.14
5289 5890 6.183360 CGTTAACTATGTGTACTCGTTTGCAT 60.183 38.462 3.71 0.00 0.00 3.96
5290 5891 5.117440 CGTTAACTATGTGTACTCGTTTGCA 59.883 40.000 3.71 0.00 0.00 4.08
5291 5892 5.117592 ACGTTAACTATGTGTACTCGTTTGC 59.882 40.000 3.71 0.00 0.00 3.68
5292 5893 6.360414 TCACGTTAACTATGTGTACTCGTTTG 59.640 38.462 3.71 0.00 43.07 2.93
5293 5894 6.360681 GTCACGTTAACTATGTGTACTCGTTT 59.639 38.462 3.71 0.00 43.07 3.60
5294 5895 5.853282 GTCACGTTAACTATGTGTACTCGTT 59.147 40.000 3.71 0.00 43.07 3.85
5295 5896 5.385617 GTCACGTTAACTATGTGTACTCGT 58.614 41.667 3.71 0.00 43.07 4.18
5296 5897 4.790140 GGTCACGTTAACTATGTGTACTCG 59.210 45.833 3.71 0.00 43.07 4.18
5297 5898 4.790140 CGGTCACGTTAACTATGTGTACTC 59.210 45.833 3.71 0.00 43.07 2.59
5298 5899 4.379813 CCGGTCACGTTAACTATGTGTACT 60.380 45.833 3.71 0.00 43.07 2.73
5299 5900 3.853671 CCGGTCACGTTAACTATGTGTAC 59.146 47.826 3.71 5.45 43.07 2.90
5300 5901 3.119531 CCCGGTCACGTTAACTATGTGTA 60.120 47.826 0.00 0.00 43.07 2.90
5301 5902 2.353011 CCCGGTCACGTTAACTATGTGT 60.353 50.000 0.00 0.00 43.07 3.72
5302 5903 2.264813 CCCGGTCACGTTAACTATGTG 58.735 52.381 0.00 5.01 43.77 3.21
5303 5904 1.895131 ACCCGGTCACGTTAACTATGT 59.105 47.619 0.00 0.00 38.78 2.29
5304 5905 2.660189 ACCCGGTCACGTTAACTATG 57.340 50.000 0.00 2.34 38.78 2.23
5305 5906 3.356290 ACTACCCGGTCACGTTAACTAT 58.644 45.455 0.00 0.00 38.78 2.12
5306 5907 2.790433 ACTACCCGGTCACGTTAACTA 58.210 47.619 0.00 0.00 38.78 2.24
5307 5908 1.620822 ACTACCCGGTCACGTTAACT 58.379 50.000 0.00 0.00 38.78 2.24
5308 5909 2.061028 CAACTACCCGGTCACGTTAAC 58.939 52.381 0.00 0.00 38.78 2.01
5309 5910 1.959985 TCAACTACCCGGTCACGTTAA 59.040 47.619 0.00 0.00 38.78 2.01
5310 5911 1.541147 CTCAACTACCCGGTCACGTTA 59.459 52.381 0.00 0.00 38.78 3.18
5311 5912 0.316204 CTCAACTACCCGGTCACGTT 59.684 55.000 0.00 0.00 38.78 3.99
5312 5913 0.538057 TCTCAACTACCCGGTCACGT 60.538 55.000 0.00 0.00 38.78 4.49
5313 5914 0.815734 ATCTCAACTACCCGGTCACG 59.184 55.000 0.00 0.00 40.55 4.35
5314 5915 2.100989 AGATCTCAACTACCCGGTCAC 58.899 52.381 0.00 0.00 0.00 3.67
5315 5916 2.526888 AGATCTCAACTACCCGGTCA 57.473 50.000 0.00 0.00 0.00 4.02
5316 5917 3.285484 TGTAGATCTCAACTACCCGGTC 58.715 50.000 0.00 0.00 39.30 4.79
5317 5918 3.053842 TCTGTAGATCTCAACTACCCGGT 60.054 47.826 0.00 0.00 39.30 5.28
5318 5919 3.552875 TCTGTAGATCTCAACTACCCGG 58.447 50.000 0.00 0.00 39.30 5.73
5319 5920 6.231951 TCTATCTGTAGATCTCAACTACCCG 58.768 44.000 0.00 0.00 39.30 5.28
5320 5921 7.228590 ACTCTATCTGTAGATCTCAACTACCC 58.771 42.308 0.00 0.00 39.30 3.69
5321 5922 8.685838 AACTCTATCTGTAGATCTCAACTACC 57.314 38.462 0.00 0.00 39.30 3.18
5322 5923 9.555727 AGAACTCTATCTGTAGATCTCAACTAC 57.444 37.037 0.00 0.00 40.13 2.73
5324 5925 9.474313 AAAGAACTCTATCTGTAGATCTCAACT 57.526 33.333 0.00 0.00 36.40 3.16
5325 5926 9.515020 CAAAGAACTCTATCTGTAGATCTCAAC 57.485 37.037 0.00 0.00 36.40 3.18
5326 5927 9.467796 TCAAAGAACTCTATCTGTAGATCTCAA 57.532 33.333 0.00 0.00 36.40 3.02
5327 5928 9.639563 ATCAAAGAACTCTATCTGTAGATCTCA 57.360 33.333 0.00 0.00 36.40 3.27
5372 5973 8.651389 CCCTTTTTCACAGTAGATATATGGAGA 58.349 37.037 0.00 0.00 0.00 3.71
5373 5974 7.880195 CCCCTTTTTCACAGTAGATATATGGAG 59.120 40.741 0.00 0.00 0.00 3.86
5374 5975 7.691791 GCCCCTTTTTCACAGTAGATATATGGA 60.692 40.741 0.00 0.00 0.00 3.41
5375 5976 6.431234 GCCCCTTTTTCACAGTAGATATATGG 59.569 42.308 0.00 0.00 0.00 2.74
5376 5977 6.998074 TGCCCCTTTTTCACAGTAGATATATG 59.002 38.462 0.00 0.00 0.00 1.78
5377 5978 7.149202 TGCCCCTTTTTCACAGTAGATATAT 57.851 36.000 0.00 0.00 0.00 0.86
5378 5979 6.569127 TGCCCCTTTTTCACAGTAGATATA 57.431 37.500 0.00 0.00 0.00 0.86
5379 5980 5.450818 TGCCCCTTTTTCACAGTAGATAT 57.549 39.130 0.00 0.00 0.00 1.63
5380 5981 4.919774 TGCCCCTTTTTCACAGTAGATA 57.080 40.909 0.00 0.00 0.00 1.98
5381 5982 3.806949 TGCCCCTTTTTCACAGTAGAT 57.193 42.857 0.00 0.00 0.00 1.98
5382 5983 3.586470 TTGCCCCTTTTTCACAGTAGA 57.414 42.857 0.00 0.00 0.00 2.59
5383 5984 4.664150 TTTTGCCCCTTTTTCACAGTAG 57.336 40.909 0.00 0.00 0.00 2.57
5384 5985 4.651503 TCATTTTGCCCCTTTTTCACAGTA 59.348 37.500 0.00 0.00 0.00 2.74
5385 5986 3.454082 TCATTTTGCCCCTTTTTCACAGT 59.546 39.130 0.00 0.00 0.00 3.55
5386 5987 4.070630 TCATTTTGCCCCTTTTTCACAG 57.929 40.909 0.00 0.00 0.00 3.66
5387 5988 4.347583 AGATCATTTTGCCCCTTTTTCACA 59.652 37.500 0.00 0.00 0.00 3.58
5388 5989 4.692155 CAGATCATTTTGCCCCTTTTTCAC 59.308 41.667 0.00 0.00 0.00 3.18
5389 5990 4.347583 ACAGATCATTTTGCCCCTTTTTCA 59.652 37.500 0.00 0.00 0.00 2.69
5390 5991 4.898320 ACAGATCATTTTGCCCCTTTTTC 58.102 39.130 0.00 0.00 0.00 2.29
5391 5992 4.980339 ACAGATCATTTTGCCCCTTTTT 57.020 36.364 0.00 0.00 0.00 1.94
5392 5993 4.980339 AACAGATCATTTTGCCCCTTTT 57.020 36.364 0.00 0.00 0.00 2.27
5393 5994 4.347583 TCAAACAGATCATTTTGCCCCTTT 59.652 37.500 12.14 0.00 33.50 3.11
5394 5995 3.903090 TCAAACAGATCATTTTGCCCCTT 59.097 39.130 12.14 0.00 33.50 3.95
5395 5996 3.509442 TCAAACAGATCATTTTGCCCCT 58.491 40.909 12.14 0.00 33.50 4.79
5396 5997 3.959535 TCAAACAGATCATTTTGCCCC 57.040 42.857 12.14 0.00 33.50 5.80
5397 5998 5.933463 TCAAATCAAACAGATCATTTTGCCC 59.067 36.000 12.14 0.00 35.39 5.36
5398 5999 7.118680 ACATCAAATCAAACAGATCATTTTGCC 59.881 33.333 12.14 0.00 35.39 4.52
5399 6000 8.025243 ACATCAAATCAAACAGATCATTTTGC 57.975 30.769 12.14 0.00 35.39 3.68
5403 6004 8.680903 GGAGTACATCAAATCAAACAGATCATT 58.319 33.333 0.00 0.00 35.39 2.57
5404 6005 7.284034 GGGAGTACATCAAATCAAACAGATCAT 59.716 37.037 0.00 0.00 35.39 2.45
5405 6006 6.599244 GGGAGTACATCAAATCAAACAGATCA 59.401 38.462 0.00 0.00 35.39 2.92
5406 6007 6.825721 AGGGAGTACATCAAATCAAACAGATC 59.174 38.462 0.00 0.00 35.39 2.75
5407 6008 6.725364 AGGGAGTACATCAAATCAAACAGAT 58.275 36.000 0.00 0.00 39.09 2.90
5408 6009 6.126863 AGGGAGTACATCAAATCAAACAGA 57.873 37.500 0.00 0.00 0.00 3.41
5409 6010 5.355350 GGAGGGAGTACATCAAATCAAACAG 59.645 44.000 0.00 0.00 0.00 3.16
5410 6011 5.222027 TGGAGGGAGTACATCAAATCAAACA 60.222 40.000 0.00 0.00 0.00 2.83
5411 6012 5.253330 TGGAGGGAGTACATCAAATCAAAC 58.747 41.667 0.00 0.00 0.00 2.93
5412 6013 5.512942 TGGAGGGAGTACATCAAATCAAA 57.487 39.130 0.00 0.00 0.00 2.69
5413 6014 5.715439 ATGGAGGGAGTACATCAAATCAA 57.285 39.130 0.00 0.00 0.00 2.57
5414 6015 5.397899 GGAATGGAGGGAGTACATCAAATCA 60.398 44.000 0.00 0.00 0.00 2.57
5415 6016 5.066593 GGAATGGAGGGAGTACATCAAATC 58.933 45.833 0.00 0.00 0.00 2.17
5416 6017 4.444876 CGGAATGGAGGGAGTACATCAAAT 60.445 45.833 0.00 0.00 0.00 2.32
5417 6018 3.118408 CGGAATGGAGGGAGTACATCAAA 60.118 47.826 0.00 0.00 0.00 2.69
5418 6019 2.434336 CGGAATGGAGGGAGTACATCAA 59.566 50.000 0.00 0.00 0.00 2.57
5419 6020 2.039418 CGGAATGGAGGGAGTACATCA 58.961 52.381 0.00 0.00 0.00 3.07
5420 6021 1.344763 CCGGAATGGAGGGAGTACATC 59.655 57.143 0.00 0.00 42.00 3.06
5421 6022 1.344087 ACCGGAATGGAGGGAGTACAT 60.344 52.381 9.46 0.00 42.00 2.29
5422 6023 0.042131 ACCGGAATGGAGGGAGTACA 59.958 55.000 9.46 0.00 42.00 2.90
5423 6024 0.464452 CACCGGAATGGAGGGAGTAC 59.536 60.000 9.46 0.00 42.00 2.73
5424 6025 1.335132 GCACCGGAATGGAGGGAGTA 61.335 60.000 9.46 0.00 42.00 2.59
5425 6026 2.670148 GCACCGGAATGGAGGGAGT 61.670 63.158 9.46 0.00 42.00 3.85
5426 6027 2.190578 GCACCGGAATGGAGGGAG 59.809 66.667 9.46 0.00 42.00 4.30
5427 6028 2.609299 TGCACCGGAATGGAGGGA 60.609 61.111 9.46 0.00 42.00 4.20
5428 6029 2.438434 GTGCACCGGAATGGAGGG 60.438 66.667 9.46 0.00 42.00 4.30
5429 6030 1.746615 CTGTGCACCGGAATGGAGG 60.747 63.158 15.69 0.00 42.00 4.30
5430 6031 1.746615 CCTGTGCACCGGAATGGAG 60.747 63.158 21.77 5.52 42.00 3.86
5431 6032 2.350895 CCTGTGCACCGGAATGGA 59.649 61.111 21.77 0.00 42.00 3.41
5432 6033 2.751436 CCCTGTGCACCGGAATGG 60.751 66.667 27.10 12.69 46.41 3.16
5433 6034 3.443045 GCCCTGTGCACCGGAATG 61.443 66.667 27.10 12.55 40.77 2.67
5444 6045 4.648626 ACTGCGCACATGCCCTGT 62.649 61.111 5.66 0.00 39.20 4.00
5445 6046 3.332493 GAACTGCGCACATGCCCTG 62.332 63.158 5.66 0.00 37.91 4.45
5446 6047 2.184020 TAGAACTGCGCACATGCCCT 62.184 55.000 5.66 0.43 37.91 5.19
5447 6048 1.709147 CTAGAACTGCGCACATGCCC 61.709 60.000 5.66 0.00 37.91 5.36
5448 6049 1.709147 CCTAGAACTGCGCACATGCC 61.709 60.000 5.66 0.00 37.91 4.40
5449 6050 1.021390 ACCTAGAACTGCGCACATGC 61.021 55.000 5.66 0.00 37.78 4.06
5450 6051 1.002366 GACCTAGAACTGCGCACATG 58.998 55.000 5.66 0.00 0.00 3.21
5451 6052 0.608130 TGACCTAGAACTGCGCACAT 59.392 50.000 5.66 0.00 0.00 3.21
5452 6053 0.608130 ATGACCTAGAACTGCGCACA 59.392 50.000 5.66 0.00 0.00 4.57
5453 6054 1.281899 GATGACCTAGAACTGCGCAC 58.718 55.000 5.66 0.00 0.00 5.34
5454 6055 0.894835 TGATGACCTAGAACTGCGCA 59.105 50.000 10.98 10.98 0.00 6.09
5455 6056 2.010145 TTGATGACCTAGAACTGCGC 57.990 50.000 0.00 0.00 0.00 6.09
5456 6057 4.631377 TCAAATTGATGACCTAGAACTGCG 59.369 41.667 0.00 0.00 0.00 5.18
5457 6058 5.873732 GTCAAATTGATGACCTAGAACTGC 58.126 41.667 0.00 0.00 43.11 4.40
5486 6087 8.338259 GCTTTTGATGACGTATATCACATTTCT 58.662 33.333 12.91 0.00 34.50 2.52
5487 6088 8.122330 TGCTTTTGATGACGTATATCACATTTC 58.878 33.333 12.91 4.92 34.50 2.17
5488 6089 7.984391 TGCTTTTGATGACGTATATCACATTT 58.016 30.769 12.91 0.00 34.50 2.32
5489 6090 7.552458 TGCTTTTGATGACGTATATCACATT 57.448 32.000 12.91 0.00 34.50 2.71
5490 6091 7.734924 ATGCTTTTGATGACGTATATCACAT 57.265 32.000 12.91 10.60 34.50 3.21
5491 6092 8.831715 ATATGCTTTTGATGACGTATATCACA 57.168 30.769 12.91 9.14 34.50 3.58
5492 6093 8.925700 TGATATGCTTTTGATGACGTATATCAC 58.074 33.333 12.91 4.72 34.50 3.06
5493 6094 9.143631 CTGATATGCTTTTGATGACGTATATCA 57.856 33.333 10.07 10.07 35.88 2.15
5494 6095 9.144747 ACTGATATGCTTTTGATGACGTATATC 57.855 33.333 5.55 5.55 0.00 1.63
5495 6096 8.929746 CACTGATATGCTTTTGATGACGTATAT 58.070 33.333 0.00 0.00 0.00 0.86
5496 6097 7.384932 CCACTGATATGCTTTTGATGACGTATA 59.615 37.037 0.00 0.00 0.00 1.47
5497 6098 6.203530 CCACTGATATGCTTTTGATGACGTAT 59.796 38.462 0.00 0.00 0.00 3.06
5498 6099 5.523552 CCACTGATATGCTTTTGATGACGTA 59.476 40.000 0.00 0.00 0.00 3.57
5499 6100 4.333649 CCACTGATATGCTTTTGATGACGT 59.666 41.667 0.00 0.00 0.00 4.34
5500 6101 4.571984 TCCACTGATATGCTTTTGATGACG 59.428 41.667 0.00 0.00 0.00 4.35
5501 6102 6.630444 ATCCACTGATATGCTTTTGATGAC 57.370 37.500 0.00 0.00 0.00 3.06
5502 6103 7.281841 TGTATCCACTGATATGCTTTTGATGA 58.718 34.615 0.00 0.00 35.94 2.92
5503 6104 7.500720 TGTATCCACTGATATGCTTTTGATG 57.499 36.000 0.00 0.00 35.94 3.07
5504 6105 9.970553 ATATGTATCCACTGATATGCTTTTGAT 57.029 29.630 0.00 0.00 35.94 2.57
5507 6108 9.371136 CGTATATGTATCCACTGATATGCTTTT 57.629 33.333 0.00 0.00 35.94 2.27
5508 6109 8.531982 ACGTATATGTATCCACTGATATGCTTT 58.468 33.333 0.00 0.00 35.94 3.51
5509 6110 8.067751 ACGTATATGTATCCACTGATATGCTT 57.932 34.615 0.00 0.00 35.94 3.91
5510 6111 7.646548 ACGTATATGTATCCACTGATATGCT 57.353 36.000 0.00 0.00 35.94 3.79
5511 6112 7.165977 CGAACGTATATGTATCCACTGATATGC 59.834 40.741 0.00 0.00 35.94 3.14
5512 6113 8.395633 TCGAACGTATATGTATCCACTGATATG 58.604 37.037 0.00 0.00 35.94 1.78
5513 6114 8.502105 TCGAACGTATATGTATCCACTGATAT 57.498 34.615 0.00 0.00 35.94 1.63
5514 6115 7.910441 TCGAACGTATATGTATCCACTGATA 57.090 36.000 0.00 0.00 32.18 2.15
5515 6116 6.812879 TCGAACGTATATGTATCCACTGAT 57.187 37.500 0.00 0.00 34.87 2.90
5516 6117 6.622833 TTCGAACGTATATGTATCCACTGA 57.377 37.500 0.00 0.00 0.00 3.41
5517 6118 6.861572 ACATTCGAACGTATATGTATCCACTG 59.138 38.462 0.00 0.00 29.93 3.66
5518 6119 6.978338 ACATTCGAACGTATATGTATCCACT 58.022 36.000 0.00 0.00 29.93 4.00
5519 6120 8.019669 ACTACATTCGAACGTATATGTATCCAC 58.980 37.037 4.34 0.00 34.15 4.02
5520 6121 8.102800 ACTACATTCGAACGTATATGTATCCA 57.897 34.615 4.34 0.00 34.15 3.41
5521 6122 8.847567 CAACTACATTCGAACGTATATGTATCC 58.152 37.037 4.34 0.00 34.15 2.59
5522 6123 9.390795 ACAACTACATTCGAACGTATATGTATC 57.609 33.333 15.93 0.00 34.15 2.24
5523 6124 9.390795 GACAACTACATTCGAACGTATATGTAT 57.609 33.333 16.90 1.72 34.15 2.29
5524 6125 8.615211 AGACAACTACATTCGAACGTATATGTA 58.385 33.333 16.90 12.24 33.58 2.29
5525 6126 7.478322 AGACAACTACATTCGAACGTATATGT 58.522 34.615 16.90 16.90 35.55 2.29
5526 6127 7.909777 AGACAACTACATTCGAACGTATATG 57.090 36.000 4.34 9.26 0.00 1.78
5529 6130 8.922058 ATTTAGACAACTACATTCGAACGTAT 57.078 30.769 4.34 0.00 0.00 3.06
5531 6132 8.922058 ATATTTAGACAACTACATTCGAACGT 57.078 30.769 1.25 1.25 0.00 3.99
5596 6197 9.367444 CGTTTTAGATCACTACTTTAATGGTCT 57.633 33.333 0.00 0.00 37.56 3.85
5597 6198 9.148104 ACGTTTTAGATCACTACTTTAATGGTC 57.852 33.333 0.00 0.00 0.00 4.02
5598 6199 9.148104 GACGTTTTAGATCACTACTTTAATGGT 57.852 33.333 0.00 0.00 0.00 3.55
5599 6200 9.367444 AGACGTTTTAGATCACTACTTTAATGG 57.633 33.333 0.00 0.00 0.00 3.16
5612 6213 9.569212 CGCAAAGAATATAAGACGTTTTAGATC 57.431 33.333 6.45 4.02 0.00 2.75
5613 6214 9.095065 ACGCAAAGAATATAAGACGTTTTAGAT 57.905 29.630 4.75 2.59 0.00 1.98
5614 6215 8.470040 ACGCAAAGAATATAAGACGTTTTAGA 57.530 30.769 4.75 0.06 0.00 2.10
5615 6216 8.592998 AGACGCAAAGAATATAAGACGTTTTAG 58.407 33.333 4.75 0.00 31.89 1.85
5616 6217 8.470040 AGACGCAAAGAATATAAGACGTTTTA 57.530 30.769 0.52 0.52 31.89 1.52
5617 6218 7.117236 TGAGACGCAAAGAATATAAGACGTTTT 59.883 33.333 0.00 0.00 31.89 2.43
5618 6219 6.588756 TGAGACGCAAAGAATATAAGACGTTT 59.411 34.615 0.00 0.00 31.89 3.60
5619 6220 6.097356 TGAGACGCAAAGAATATAAGACGTT 58.903 36.000 0.00 0.00 31.89 3.99
5620 6221 5.647589 TGAGACGCAAAGAATATAAGACGT 58.352 37.500 0.00 0.00 34.85 4.34
5621 6222 6.569228 TTGAGACGCAAAGAATATAAGACG 57.431 37.500 0.00 0.00 32.46 4.18
5627 6228 8.946085 TCACTTATTTTGAGACGCAAAGAATAT 58.054 29.630 4.52 0.00 46.38 1.28
5628 6229 8.317891 TCACTTATTTTGAGACGCAAAGAATA 57.682 30.769 4.52 0.00 46.38 1.75
5629 6230 7.202016 TCACTTATTTTGAGACGCAAAGAAT 57.798 32.000 4.52 0.12 46.38 2.40
5630 6231 6.612247 TCACTTATTTTGAGACGCAAAGAA 57.388 33.333 4.52 3.42 46.38 2.52
5631 6232 6.204688 ACATCACTTATTTTGAGACGCAAAGA 59.795 34.615 4.52 0.00 46.38 2.52
5632 6233 6.373779 ACATCACTTATTTTGAGACGCAAAG 58.626 36.000 4.52 0.00 46.38 2.77
5633 6234 6.312399 ACATCACTTATTTTGAGACGCAAA 57.688 33.333 0.00 0.00 44.38 3.68
5634 6235 5.940192 ACATCACTTATTTTGAGACGCAA 57.060 34.783 0.00 0.00 33.88 4.85
5635 6236 5.468409 TGAACATCACTTATTTTGAGACGCA 59.532 36.000 0.00 0.00 0.00 5.24
5636 6237 5.927030 TGAACATCACTTATTTTGAGACGC 58.073 37.500 0.00 0.00 0.00 5.19
5637 6238 8.955061 AAATGAACATCACTTATTTTGAGACG 57.045 30.769 0.00 0.00 0.00 4.18
5675 6276 8.912988 CCCAAAATAAGTGCCTCTGATTTAATA 58.087 33.333 2.92 0.00 36.49 0.98
5676 6277 7.619302 TCCCAAAATAAGTGCCTCTGATTTAAT 59.381 33.333 2.92 0.00 36.49 1.40
5677 6278 6.951198 TCCCAAAATAAGTGCCTCTGATTTAA 59.049 34.615 2.92 0.00 36.49 1.52
5678 6279 6.489603 TCCCAAAATAAGTGCCTCTGATTTA 58.510 36.000 2.92 0.00 36.49 1.40
5679 6280 5.332743 TCCCAAAATAAGTGCCTCTGATTT 58.667 37.500 0.00 0.00 38.49 2.17
5680 6281 4.934356 TCCCAAAATAAGTGCCTCTGATT 58.066 39.130 0.00 0.00 0.00 2.57
5681 6282 4.591321 TCCCAAAATAAGTGCCTCTGAT 57.409 40.909 0.00 0.00 0.00 2.90
5682 6283 4.079253 GTTCCCAAAATAAGTGCCTCTGA 58.921 43.478 0.00 0.00 0.00 3.27
5683 6284 4.082125 AGTTCCCAAAATAAGTGCCTCTG 58.918 43.478 0.00 0.00 0.00 3.35
5684 6285 4.082125 CAGTTCCCAAAATAAGTGCCTCT 58.918 43.478 0.00 0.00 0.00 3.69
5685 6286 3.193479 CCAGTTCCCAAAATAAGTGCCTC 59.807 47.826 0.00 0.00 0.00 4.70
5686 6287 3.165071 CCAGTTCCCAAAATAAGTGCCT 58.835 45.455 0.00 0.00 0.00 4.75
5687 6288 3.161866 TCCAGTTCCCAAAATAAGTGCC 58.838 45.455 0.00 0.00 0.00 5.01
5688 6289 4.142160 GGATCCAGTTCCCAAAATAAGTGC 60.142 45.833 6.95 0.00 0.00 4.40
5689 6290 5.264395 AGGATCCAGTTCCCAAAATAAGTG 58.736 41.667 15.82 0.00 36.35 3.16
5690 6291 5.254032 AGAGGATCCAGTTCCCAAAATAAGT 59.746 40.000 15.82 0.00 36.35 2.24
5691 6292 5.760131 AGAGGATCCAGTTCCCAAAATAAG 58.240 41.667 15.82 0.00 36.35 1.73
5692 6293 5.796502 AGAGGATCCAGTTCCCAAAATAA 57.203 39.130 15.82 0.00 36.35 1.40
5693 6294 6.631766 CGTTAGAGGATCCAGTTCCCAAAATA 60.632 42.308 15.82 0.00 36.35 1.40
5694 6295 5.510430 GTTAGAGGATCCAGTTCCCAAAAT 58.490 41.667 15.82 0.00 36.35 1.82
5695 6296 4.564821 CGTTAGAGGATCCAGTTCCCAAAA 60.565 45.833 15.82 0.00 36.35 2.44
5696 6297 3.055385 CGTTAGAGGATCCAGTTCCCAAA 60.055 47.826 15.82 0.00 36.35 3.28
5697 6298 2.500098 CGTTAGAGGATCCAGTTCCCAA 59.500 50.000 15.82 0.00 36.35 4.12
5698 6299 2.108168 CGTTAGAGGATCCAGTTCCCA 58.892 52.381 15.82 0.00 36.35 4.37
5699 6300 2.108970 ACGTTAGAGGATCCAGTTCCC 58.891 52.381 15.82 0.00 36.35 3.97
5700 6301 3.698040 TGTACGTTAGAGGATCCAGTTCC 59.302 47.826 15.82 0.00 33.66 3.62
5701 6302 4.157289 TGTGTACGTTAGAGGATCCAGTTC 59.843 45.833 15.82 2.55 33.66 3.01
5702 6303 4.084287 TGTGTACGTTAGAGGATCCAGTT 58.916 43.478 15.82 0.90 33.66 3.16
5703 6304 3.693807 TGTGTACGTTAGAGGATCCAGT 58.306 45.455 15.82 2.43 33.66 4.00
5704 6305 4.440250 CCTTGTGTACGTTAGAGGATCCAG 60.440 50.000 15.82 0.00 33.66 3.86
5705 6306 3.446161 CCTTGTGTACGTTAGAGGATCCA 59.554 47.826 15.82 0.00 33.66 3.41
5706 6307 3.446516 ACCTTGTGTACGTTAGAGGATCC 59.553 47.826 2.48 2.48 33.66 3.36
5707 6308 4.715527 ACCTTGTGTACGTTAGAGGATC 57.284 45.455 0.00 0.00 0.00 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.